Psyllid ID: psy11734

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------
Protein Sequence
MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQELEQS
Secondary Structure (PSIPRED)
ccEEEcccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccHHcccccccccccccccHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHcccccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHcccccccccccccccccccHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccccccccccccccccccEEEccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcHHHccccccccccccccEEHHHcccccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccHHHHHHEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHc
Secondary Structure Prediction (SSPRO)
ccEEEccEcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHEEccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHEEEEEEEHHHHHccHHHccccEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEHHHHHEEEEccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHEEEEEEEHHHHHHcHHHccccEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHcc
Coil and Loop (DISEMBL)
mvemsnfpkgttfPALCTLlaqwsppnerSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCIlcfndpkshpyiseKERKYLLDSIGAAerrkdakfdwdertqgVILSSFYygytlthipggilsqkfggkhtlgLGFLSTALLTLLTplvahsgpvSMTVLRFLEGvgedlktpWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVaengvlsaLPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYAsirvnpidlspnfsGTIMALSNGlgcvsgmvapLTVGFLtqniisinpidlspnfsGTIMALSNGlgcvsgmvapLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSgevqywnesilpARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVkttkhdfvntescfpnangnhtvvsktyttldakfdwdertqGVILSAFYYGYIlthipggilsqkfggkhtlglGFLSTAIFTLLTpliahsgpvSMTVLRFLEgvgedletpWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVaengvlsaLPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYAsirvnpidlspnfsGTIMALSNGlgcvsgmvapLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSgevqywneknggveindrqeleqs
Flexible Loop (DISEMBL)
mvemsnfpkgTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAerrkdakfdwdertQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTescfpnangnhtvVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYwneknggveindrqeleqs
Low Complexity Region (SEG)
MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHtlglgflstalltlltplVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFatlgavlpgvgalaaSYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFatlgavlpgvgalaaSYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQELEQS
Disordered region (IsUnstruct)
**********TTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNEKN**************
Disordered Region (DISOPRED)
MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVS***************TPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVL*********LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQY*******************
Disordered Region (DISEMBL)
********KGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQELEQS
Disordered Region (DISPRO)
MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKT***DFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQY*******************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQELEQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	817	2.2.26 [Sep-21-2011]
Q9V7S5	529	Putative inorganic phosph	no	N/A	0.261	0.404	0.364	3e-41
O61369	483	Putative inorganic phosph	N/A	N/A	0.269	0.455	0.353	5e-40
Q9NRA2	495	Sialin OS=Homo sapiens GN	no	N/A	0.257	0.424	0.349	5e-36
Q8BN82	495	Sialin OS=Mus musculus GN	yes	N/A	0.199	0.329	0.351	7e-36
Q9MZD1	495	Sialin OS=Ovis aries GN=S	N/A	N/A	0.258	0.426	0.339	1e-34
Q1L8X9	590	Vesicular glutamate trans	no	N/A	0.257	0.355	0.366	5e-34
Q9JI12	582	Vesicular glutamate trans	no	N/A	0.277	0.390	0.345	2e-33
Q5W8I7	587	Vesicular glutamate trans	no	N/A	0.277	0.386	0.345	3e-33
Q9P2U8	582	Vesicular glutamate trans	no	N/A	0.277	0.390	0.341	4e-33
A6QLI1	582	Vesicular glutamate trans	no	N/A	0.277	0.390	0.341	4e-33

>sp|Q9V7S5|PICO_DROME Putative inorganic phosphate cotransporter OS=Drosophila melanogaster GN=Picot PE=1 SV=1

 Score =  171 bits (432), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 137/222 (61%), Gaps = 8/222 (3%)

Query: 595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
           P+ AI+ SLP ++++ + +GH+YG+  + ++LP YM QV+  S+  NG+LS+LP+L MWL
Sbjct: 286 PFKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWL 345

Query: 655 VSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGM 714
            SM  S +AD++I     S T  RK+  ++G   PGV  +AASY GC+ ++     TIG+
Sbjct: 346 FSMFISVVADWMISSKRFSHTATRKLINSIGQYGPGVALIAASYTGCDRALTLAILTIGV 405

Query: 715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT---LLEWR 771
              G  Y+  ++N +DL+P F+G +M+++N    ++G++AP+  G L  + +   + +W+
Sbjct: 406 GLNGGIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGHLISDPSKPMMGQWQ 465

Query: 772 VVFWIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQE 813
           +VF+I      I   F+ +FGSGE QYW+        +D Q+
Sbjct: 466 IVFFIAAFVYIICGTFYNIFGSGERQYWDNPE-----DDEQK 502

May be an inorganic phosphate cotransporter.
Drosophila melanogaster (taxid: 7227)

>sp|O61369|PICO_DROAN Putative inorganic phosphate cotransporter OS=Drosophila ananassae GN=Picot PE=3 SV=1

 Score =  166 bits (421), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 140/226 (61%), Gaps = 6/226 (2%)

Query: 595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
           P+ +I+ SLP ++++ + +GH+YG+  + ++LP YM QV+  S+  NG+LS+LP+L MWL
Sbjct: 240 PFKSIVKSLPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWL 299

Query: 655 VSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGM 714
           +SM  S +AD++I     S T  RK+  ++G   PG+  +AASY GC+ ++     TIG+
Sbjct: 300 LSMFISVIADWMISSKRFSLTATRKIINSIGQYGPGLALIAASYTGCDRALTLAILTIGV 359

Query: 715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT---LLEWR 771
              G  Y+  ++N +DL+P F+G +M+++N    ++G++AP+  G L  + +   + +W+
Sbjct: 360 GLNGGIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGNLISDPSKPVMGQWQ 419

Query: 772 VVFWIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQELEQS 817
           +VF+I      I   F+ +FGSGE Q+W+  +   E   +  LE S
Sbjct: 420 IVFFIAAFVYIICGTFYNIFGSGERQFWDNPS---EDEQKPALESS 462

May be an inorganic phosphate cotransporter.

Drosophila ananassae (taxid: 7217)

>sp|Q9NRA2|S17A5_HUMAN Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2

 Score =  153 bits (387), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 124/212 (58%), Gaps = 2/212 (0%)

Query: 595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
           PW  IL SLP+W+++++   +++ FY + + LP YM +++  +V ENG LS+LP+L  WL
Sbjct: 281 PWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWL 340

Query: 655 VSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGM 714
             + S   AD L  +   S   VR++F+ +G + P V  +AA ++GC+ S+     TI  
Sbjct: 341 CMILSGQAADNLRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDYSLAVAFLTIST 400

Query: 715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
              GFC +   +N +D++P+++G ++ ++N    + GMV P+    LT + T+ EW+ VF
Sbjct: 401 TLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDNTVGEWQTVF 460

Query: 775 WIMFLTLFISNVFFVLFGSGEVQYW--NEKNG 804
           +I         +FF LF  GEVQ W  N+ +G
Sbjct: 461 YIAAAINVFGAIFFTLFAKGEVQNWALNDHHG 492

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.

Homo sapiens (taxid: 9606)

>sp|Q8BN82|S17A5_MOUSE Sialin OS=Mus musculus GN=Slc17a5 PE=2 SV=2

 Score =  152 bits (385), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 119/205 (58%)

Query: 595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
           PW +IL SLP+W+++++   +++ FY + + LP YM +++  +V ENG LSALP+   WL
Sbjct: 281 PWGSILKSLPLWAIVVAHFSYNWSFYTLLTLLPTYMKEILRFNVQENGFLSALPYFGCWL 340

Query: 655 VSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGM 714
             +     ADYL V+   S  +VR++F+ +G V P V  +AA ++GC+ S+     TI  
Sbjct: 341 CMILCGQAADYLRVKWNFSTISVRRIFSLVGMVGPAVFLVAAGFIGCDYSLAVAFLTIST 400

Query: 715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
              GF  +   +N +D++P+++G ++ ++N    + GM  P+    LT + T+ EW+ VF
Sbjct: 401 TLGGFASSGFSINHLDIAPSYAGILLGITNTFATIPGMTGPIIAKSLTPDNTIREWQTVF 460

Query: 775 WIMFLTLFISNVFFVLFGSGEVQYW 799
            I         +FF LF  GEVQ W
Sbjct: 461 CIAAAINVFGAIFFTLFAKGEVQSW 485

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.

Mus musculus (taxid: 10090)

>sp|Q9MZD1|S17A5_SHEEP Sialin OS=Ovis aries GN=SLC17A5 PE=2 SV=1

 Score =  149 bits (375), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 122/218 (55%), Gaps = 7/218 (3%)

Query: 595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
           PW  +L SLP+W+++++   +++ FY + + LP YM +V+  ++ ENG LSA+P+L  WL
Sbjct: 281 PWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEVLRFNIQENGFLSAVPYLGCWL 340

Query: 655 VSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGM 714
             + S   AD L  R   S   VR+VF+ +G + P +  +AA ++GC+ S+     TI  
Sbjct: 341 CMILSGQAADNLRARWNFSTLWVRRVFSLIGMIGPAIFLVAAGFIGCDYSLAVAFLTIST 400

Query: 715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
              GFC +   +N +D++P+++G ++ ++N    + GM+ P+    LT   T+ EW+ VF
Sbjct: 401 TLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMIGPIIARSLTPENTIGEWQTVF 460

Query: 775 WIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQ 812
            I         +FF LF  GEVQ W        I+D Q
Sbjct: 461 CIAAAINVFGAIFFTLFAKGEVQNW-------AISDHQ 491

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes (Probable). Receptor for CM101, a polysaccharide produced by group B Streptococcus with antipathoangiogenic properties.

Ovis aries (taxid: 9940)

>sp|Q1L8X9|VGLU3_DANRE Vesicular glutamate transporter 3 OS=Danio rerio GN=slc17a8 PE=3 SV=2

 Score =  146 bits (369), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 3/213 (1%)

Query: 590 EDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF 649
           E  +TPW    +S+PV+++I++     + FYL+    P Y  +V G  +++ G+LSA+P 
Sbjct: 302 EKFKTPWREFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFPISKVGILSAVPH 361

Query: 650 LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIC 709
           ++M ++      LAD+L  R ILS T VRK+    G  +     L   +   +T  VAI 
Sbjct: 362 MVMTIIVPIGGQLADFLRSRKILSTTTVRKIMNCGGFGMEATLLLVVGF--SHTRAVAIS 419

Query: 710 FTI-GMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLL 768
           F I  + F GF  +   VN +D++P ++  +M +SNG+G +SGMV PL VG LT++KT L
Sbjct: 420 FLILAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGALTKHKTRL 479

Query: 769 EWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNE 801
           EW+ VF I  +  +   +F+ +F SGE Q W +
Sbjct: 480 EWQHVFVIASMVHYTGVIFYAIFASGEKQDWAD 512

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.

Danio rerio (taxid: 7955)

>sp|Q9JI12|VGLU2_RAT Vesicular glutamate transporter 2 OS=Rattus norvegicus GN=Slc17a6 PE=1 SV=1

 Score =  144 bits (363), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 130/237 (54%), Gaps = 10/237 (4%)

Query: 585 LEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVL 644
           L G  E  +TPW    +S+PV+++I++     + FYL+    P Y  +V G  +++ G+L
Sbjct: 292 LLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGML 351

Query: 645 SALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTS 704
           SA+P L+M ++      +AD+L  + ILS T VRK+    G  +     L   Y   +T 
Sbjct: 352 SAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGY--SHTR 409

Query: 705 MVAICF-TIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763
            VAI F  + + F GF  +   VN +D++P ++  +M +SNG+G +SGMV P+ VG +T+
Sbjct: 410 GVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTK 469

Query: 764 NKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYW-------NEKNGGVEINDRQE 813
           NK+  EW+ VF I  L  +   +F+ LF SGE Q W        EK G +  ++  E
Sbjct: 470 NKSREEWQYVFLIAALVHYGGVIFYALFASGEKQPWADPEETSEEKCGFIHEDELDE 526

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also play a role in the endocrine glutamatergic system of other tissues such as pineal gland and pancreas. May also mediate the transport of inorganic phosphate.

Rattus norvegicus (taxid: 10116)

>sp|Q5W8I7|VGL2B_DANRE Vesicular glutamate transporter 2.2 OS=Danio rerio GN=slc17a6a PE=2 SV=1

 Score =  144 bits (362), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 133/237 (56%), Gaps = 10/237 (4%)

Query: 585 LEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVL 644
           L G  E  +TPW    +S+PV+++I++     + FYL+    P Y  +V G  +++ G++
Sbjct: 293 LLGAMEKYKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMV 352

Query: 645 SALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTS 704
           SALP L+M ++      LADYL  ++IL+ T VRK+    G  +     L   +   ++ 
Sbjct: 353 SALPHLVMTIIVPIGGQLADYLRSKNILTTTTVRKIMNCGGFGMEATLLLVVGF--SHSK 410

Query: 705 MVAICF-TIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763
            VAI F  + + F GF  +   VN +D++P ++  +M +SNG+G +SGMV PL VG +T+
Sbjct: 411 GVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTK 470

Query: 764 NKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYW-------NEKNGGVEINDRQE 813
           NKT  EW+ VF I  L  +   +F+ +F SGE Q W       +EK G ++ ++  E
Sbjct: 471 NKTREEWQNVFLIASLVHYGGVIFYGIFASGEKQPWADPEETSDEKCGFIDEDELAE 527

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.

Danio rerio (taxid: 7955)

>sp|Q9P2U8|VGLU2_HUMAN Vesicular glutamate transporter 2 OS=Homo sapiens GN=SLC17A6 PE=1 SV=1

 Score =  144 bits (362), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 130/237 (54%), Gaps = 10/237 (4%)

Query: 585 LEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVL 644
           L G  E  +TPW    +S+PV+++I++     + FYL+    P Y  +V G  +++ G+L
Sbjct: 292 LLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGML 351

Query: 645 SALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTS 704
           SA+P L+M ++      +AD+L  + ILS T VRK+    G  +     L   Y   +T 
Sbjct: 352 SAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGY--SHTR 409

Query: 705 MVAICF-TIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763
            VAI F  + + F GF  +   VN +D++P ++  +M +SNG+G +SGMV P+ VG +T+
Sbjct: 410 GVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTK 469

Query: 764 NKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYW-------NEKNGGVEINDRQE 813
           NK+  EW+ VF I  L  +   +F+ +F SGE Q W        EK G +  ++  E
Sbjct: 470 NKSREEWQYVFLIAALVHYGGVIFYAIFASGEKQPWADPEETSEEKCGFIHEDELDE 526

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.

Homo sapiens (taxid: 9606)

>sp|A6QLI1|VGLU2_BOVIN Vesicular glutamate transporter 2 OS=Bos taurus GN=SLC17A6 PE=2 SV=1

 Score =  144 bits (362), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 130/237 (54%), Gaps = 10/237 (4%)

Query: 585 LEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVL 644
           L G  E  +TPW    +S+PV+++I++     + FYL+    P Y  +V G  +++ G+L
Sbjct: 292 LLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGML 351

Query: 645 SALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTS 704
           SA+P L+M ++      +AD+L  + ILS T VRK+    G  +     L   Y   +T 
Sbjct: 352 SAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGY--SHTR 409

Query: 705 MVAICF-TIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763
            VAI F  + + F GF  +   VN +D++P ++  +M +SNG+G +SGMV P+ VG +T+
Sbjct: 410 GVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTK 469

Query: 764 NKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYW-------NEKNGGVEINDRQE 813
           NK+  EW+ VF I  L  +   +F+ +F SGE Q W        EK G +  ++  E
Sbjct: 470 NKSREEWQYVFLIAALVHYGGVIFYAIFASGEKQPWADPEETSEEKCGFIHEDELDE 526

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	817
357602266	547	sodium-dependent phosphate transporter [	0.461	0.689	0.325	2e-69
328709879	514	PREDICTED: sialin-like [Acyrthosiphon pi	0.339	0.538	0.482	9e-67
328725531	380	PREDICTED: sialin-like, partial [Acyrtho	0.339	0.728	0.482	9e-67
328713763	514	PREDICTED: sialin-like [Acyrthosiphon pi	0.332	0.529	0.477	4e-66
193690601	520	PREDICTED: sialin-like [Acyrthosiphon pi	0.356	0.559	0.445	2e-63
332017618	493	Putative inorganic phosphate cotransport	0.299	0.496	0.468	6e-62
322794510	486	hypothetical protein SINV_12524 [Solenop	0.221	0.372	0.484	2e-60
328713756	297	PREDICTED: putative inorganic phosphate	0.318	0.875	0.444	6e-60
307170758	489	Putative inorganic phosphate cotransport	0.301	0.503	0.459	5e-59
189240403	487	PREDICTED: similar to sodium-dependent p	0.270	0.453	0.451	4e-58

>gi|357602266|gb|EHJ63328.1| sodium-dependent phosphate transporter [Danaus plexippus]

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 237/443 (53%), Gaps = 66/443 (14%)

Query: 4   MSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWAN 63
           +  F +G T P L  ++++W+P +ER+ + A+VF G Q+G++  ++ SGLI+    SW N
Sbjct: 134 VEGFGEGPTMPGLMAMISKWAPKSERARIGAIVFGGAQIGNIAGSYFSGLIIH-AGSWEN 192

Query: 64  VFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGA---AERRKDAKFDWDE 120
           VFY+FG   + WFA W +LC++ P +HP+IS+KE+K+L +++ A   +E++      W  
Sbjct: 193 VFYMFGGFGLAWFAIWSVLCYSTPNTHPFISDKEKKFLNENVQALIHSEKQILDPVPWKA 252

Query: 121 RTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMT 180
             + V L S         I G +L       H     F+S      L   V     +  +
Sbjct: 253 LLRSVPLWSLI-------IAGSLLCYSTPNTHP----FISDKEKKFLNENVQ---ALIHS 298

Query: 181 VLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240
             + L+ V      PW A+L S+P+WSLII+ +GHD+G + + TDLPKYM++V+  ++  
Sbjct: 299 EKQILDPV------PWKALLRSVPLWSLIIAGIGHDWGYFTMVTDLPKYMTDVLKFNIKS 352

Query: 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG 300
            G+LSALP++ MW+ S     L DF   R   S  N RK++ T+ A  PG+  + ASY G
Sbjct: 353 AGLLSALPYVAMWIASFFFGLLCDFCTKRKYHSIQNARKIYTTIAATGPGICIILASYSG 412

Query: 301 CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGF 360
           C+T++   +F   M  MG  Y+ +++N +D++PN++GT  A+ NG+  +SG+++P  +G 
Sbjct: 413 CDTTLAVFWFIAAMTLMGAYYSGMKINALDITPNYAGTTTAMVNGIAAISGIISPYLIG- 471

Query: 361 LTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMF 420
                                                     LT + TL EWR+ FW+  
Sbjct: 472 -----------------------------------------LLTPHSTLKEWRIAFWVCL 490

Query: 421 LALVISNVFFVLFGSGEVQYWNE 443
             LVI+N+ +++F  GE Q+W++
Sbjct: 491 AILVITNIIYLIFAKGEQQWWDD 513

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328709879|ref|XP_001947589.2| PREDICTED: sialin-like [Acyrthosiphon pisum]

 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 137/284 (48%), Positives = 190/284 (66%), Gaps = 7/284 (2%)

Query: 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLR 583
           G I S F  G+I+ +IPGG  +  +    T  + F+   IF    P  +H     M    
Sbjct: 194 GNIFSNFLSGFIIQYIPGGWPNVFYFFGITSLIWFVLWCIFVYNDP-NSHPFISDMERDY 252

Query: 584 FLEGVG-----EDL-ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLS 637
             + +G     +DL  TPW +IL+S PVW+LII E GHD+G + I SDLPKYMS V+  S
Sbjct: 253 LKQSIGSLERKKDLAPTPWKSILTSWPVWALIIVEAGHDWGGFTIISDLPKYMSDVLHFS 312

Query: 638 VAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAAS 697
           + ENG+LS++P++  W+ S+ +S LAD LI + I+S T VRKV+A +G V PG+G + AS
Sbjct: 313 ITENGLLSSIPYIAQWVTSILASILADRLISKRIMSVTAVRKVYAIIGTVGPGMGVMCAS 372

Query: 698 YVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 757
           +VGC+  +  +CFT+GMA MGFCY SIR+N +DLSPN++ TIMAL NG+GC+SGM  P  
Sbjct: 373 FVGCDKMIATLCFTLGMALMGFCYPSIRINSLDLSPNYAPTIMALVNGIGCLSGMATPYV 432

Query: 758 VGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNE 801
            G LT N+T+LEWR+VFWIM + +  S+V + LFGSGE+Q W++
Sbjct: 433 AGILTPNRTVLEWRLVFWIMMIVMTASSVVYGLFGSGELQPWDD 476

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328725531|ref|XP_001952551.2| PREDICTED: sialin-like, partial [Acyrthosiphon pisum]

 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 137/284 (48%), Positives = 190/284 (66%), Gaps = 7/284 (2%)

Query: 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLR 583
           G I S F  G+I+ +IPGG  +  +    T  + F+   IF    P  +H     M    
Sbjct: 60  GNIFSNFLSGFIIQYIPGGWPNVFYFFGITSLIWFVLWCIFVYNDP-NSHPFISDMERDY 118

Query: 584 FLEGVG-----EDL-ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLS 637
             + +G     +DL  TPW +IL+S PVW+LII E GHD+G + I SDLPKYMS V+  S
Sbjct: 119 LKQSIGSLERKKDLAPTPWKSILTSWPVWALIIVEAGHDWGGFTIISDLPKYMSDVLHFS 178

Query: 638 VAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAAS 697
           + ENG+LS++P++  W+ S+ +S LAD LI + I+S T VRKV+A +G V PG+G + AS
Sbjct: 179 ITENGLLSSIPYIAQWVTSILASILADRLISKRIMSVTAVRKVYAIIGTVGPGMGVMCAS 238

Query: 698 YVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 757
           +VGC+  +  +CFT+GMA MGFCY SIR+N +DLSPN++ TIMAL NG+GC+SGM  P  
Sbjct: 239 FVGCDKMIATLCFTLGMALMGFCYPSIRINSLDLSPNYAPTIMALVNGIGCLSGMATPYV 298

Query: 758 VGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNE 801
            G LT N+T+LEWR+VFWIM + +  S+V + LFGSGE+Q W++
Sbjct: 299 AGILTPNRTVLEWRLVFWIMMIVMTASSVVYGLFGSGELQPWDD 342

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713763|ref|XP_001947560.2| PREDICTED: sialin-like [Acyrthosiphon pisum]

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 138/289 (47%), Positives = 190/289 (65%), Gaps = 17/289 (5%)

Query: 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI---AHSGP-VSM 579
           G I S F  G+I+ + PGG  +  +        G  S   F L   L+     S P +S 
Sbjct: 194 GNIFSNFLSGFIIQYTPGGWPNVFYF------FGITSLIWFVLWCVLVYNDPKSHPFISD 247

Query: 580 TVLRFLEGVGEDLE-------TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQ 632
           T   +L+     LE       TPW +IL+S  +W+LI  EVGHD+G + I SDLPKYMS 
Sbjct: 248 TEREYLKKSIGSLERKRELPSTPWKSILTSWKIWALIFIEVGHDWGAFTIISDLPKYMSD 307

Query: 633 VIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVG 692
           V+  S++ENG+LS++PF+  W+ S+ +S LAD+LI + I++ T VRK+FA +G V PG+G
Sbjct: 308 VLHFSISENGLLSSVPFIAQWVTSILASILADWLISKRIMTVTAVRKIFAIIGNVGPGIG 367

Query: 693 ALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGM 752
            + AS+VGC+  +  +CFT+GMA MGFCY SIRVN +DLSPN+S TIMAL NG+GC+SGM
Sbjct: 368 VMCASFVGCDKMIATLCFTLGMALMGFCYPSIRVNSLDLSPNYSSTIMALVNGIGCLSGM 427

Query: 753 VAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNE 801
             P   G LT N+T+LEWR+VFWIM + +  S+V + LFGSGE+Q W++
Sbjct: 428 ATPYIAGILTPNRTVLEWRLVFWIMMIVMTSSSVLYGLFGSGELQPWDD 476

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193690601|ref|XP_001949739.1| PREDICTED: sialin-like [Acyrthosiphon pisum]

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/303 (44%), Positives = 197/303 (65%), Gaps = 12/303 (3%)

Query: 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGP-VSMTVL 582
           G ILS F  G+I+ +IPGG  +  +       + FL   +F    P   +S P +S    
Sbjct: 205 GNILSNFLSGFIMRYIPGGWPNVFYFFGIVSIIWFLIWCMFVYNDP---NSHPFISDEER 261

Query: 583 RFLE-GVG-----EDLE-TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIG 635
            +L+  +G     +DL+ TPW +IL+S PVW+LII   GHD+G + + SDLPKYMS V+ 
Sbjct: 262 AYLKRSIGRLERKKDLKPTPWKSILTSGPVWALIIGGAGHDWGAFTLISDLPKYMSDVLH 321

Query: 636 LSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA 695
            SV ENG+L+++PFL  W+ S+ +S LAD LI +  +  T VRK++A +G + P +G + 
Sbjct: 322 FSVTENGLLTSIPFLAQWVTSVVASILADRLISKGSMKVTRVRKIYAIIGNLGPALGVMC 381

Query: 696 ASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAP 755
           AS+VGCN  +  +CFT+G+A MGFCY S+R+N +DLSPN+S T+M L NG+GC+SGM  P
Sbjct: 382 ASFVGCNKIIATLCFTLGVALMGFCYPSLRINSLDLSPNYSPTLMGLVNGIGCLSGMATP 441

Query: 756 LTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNE-KNGGVEINDRQEL 814
             VG LT N+T+LEWR+VFWIM + +  +++ FV FGSGEVQ W++ K   +  N++   
Sbjct: 442 YIVGILTPNRTVLEWRLVFWIMVIIMMSTSLIFVFFGSGEVQPWDDIKQYRLSENEKDNK 501

Query: 815 EQS 817
           +  
Sbjct: 502 DNE 504

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332017618|gb|EGI58315.1| Putative inorganic phosphate cotransporter [Acromyrmex echinatior]

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 121/258 (46%), Positives = 176/258 (68%), Gaps = 13/258 (5%)

Query: 570 LIAHSGP-----VSMTVLRFL-EGVGEDLET-----PWAAILSSLPVWSLIISEVGHDYG 618
           LI +S P     +S   ++FL E + E   T     PW  +L S P+W+LI ++VGHD+G
Sbjct: 225 LICYSNPYEHPFISEREVKFLHERMNEHTHTKPPPVPWRHMLRSAPLWALIAAQVGHDWG 284

Query: 619 FYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR 678
           F+ + +DLPKYMS V+  S+  NG++SALP+LIMW  S+ SS LAD++I++ I+SRTNVR
Sbjct: 285 FFTLVTDLPKYMSSVLNYSIKSNGLVSALPYLIMWFCSIGSSWLADWMIIKGIMSRTNVR 344

Query: 679 KVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGT 738
           K+  T+ ++ PGV  +AASY  C+ ++V   FTIGMA MG  Y  ++VN +DLSPN+SGT
Sbjct: 345 KLGTTIASIGPGVFIIAASYSSCDRTLVVAMFTIGMALMGTFYPGMKVNGLDLSPNYSGT 404

Query: 739 IMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQY 798
           +MAL NG+G ++G++ P  VG L   +T+ +WR VFWI+     ++NV FV++ SGEVQY
Sbjct: 405 LMALVNGMGALTGIITPYIVGVLASEQTMSQWRTVFWIVLGVFIVTNVIFVMYASGEVQY 464

Query: 799 WNEKNGGVEINDRQELEQ 816
           WN+ +    I DR+E  +
Sbjct: 465 WNDPD--FVIRDREERSR 480

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322794510|gb|EFZ17563.1| hypothetical protein SINV_12524 [Solenopsis invicta]

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 108/223 (48%), Positives = 160/223 (71%)

Query: 595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
           PW  +L+S P+W+LI ++VGHD+GF+ + +DLPKYMS V+  S+  NG +SALP+L+MW 
Sbjct: 263 PWRHMLTSAPIWALIAAQVGHDWGFFTLVTDLPKYMSSVLRYSIKNNGYVSALPYLVMWF 322

Query: 655 VSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGM 714
            S+ +S LAD++IV+ ++SRTNVRK+  T+ ++ PGV  +AASY  C+ ++V   FTIGM
Sbjct: 323 SSIGTSWLADWMIVKGVMSRTNVRKLGTTIASIGPGVFIIAASYSKCDRTLVVAMFTIGM 382

Query: 715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
           A MG  Y  ++VN +DLSPN+SGT+MAL NG+G  +G++ P  VG +   +TL +WR VF
Sbjct: 383 ALMGTFYPGMKVNGLDLSPNYSGTLMALVNGMGAFTGIITPYIVGEIAPEQTLSQWRTVF 442

Query: 775 WIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQELEQS 817
           WI+     +SN+ FV+F SGEVQYWN+ +  +   D + L++ 
Sbjct: 443 WIVLGVFILSNLIFVMFASGEVQYWNDPDFVIRDRDERRLQKK 485

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713756|ref|XP_001947456.2| PREDICTED: putative inorganic phosphate cotransporter-like [Acyrthosiphon pisum]

 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 124/279 (44%), Positives = 181/279 (64%), Gaps = 19/279 (6%)

Query: 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLR 583
           G I S F  G I+ +IPGG         +   +  +++ I+ +L  +  +  P S     
Sbjct: 9   GNIFSDFLSGLIIKYIPGG-------WPNVFYIFGITSLIWFVLWWMFVYDDPSSHPF-- 59

Query: 584 FLEGVGEDL-ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENG 642
               + +DL  TPW  IL+S  VW+LII E GHD+G Y I +DLPKYM+ V+  S++ENG
Sbjct: 60  ----ISKDLAPTPWITILTSWAVWALIIVEAGHDWGAYTIITDLPKYMNDVLHFSLSENG 115

Query: 643 VLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCN 702
           +LS+ P++  W+ S+  S LAD+L+ + ++S T VRK       V PG+G + AS+VGC+
Sbjct: 116 LLSSFPYIAKWVTSILVSILADWLLTKRLMSVTAVRK-----RNVGPGIGVMCASFVGCD 170

Query: 703 TSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLT 762
             +  +CFT+G+A MGFCY SIRVN +DLSPN++ TIMAL NG+GC+SGM  P   G LT
Sbjct: 171 KIIATLCFTLGLALMGFCYPSIRVNSLDLSPNYAPTIMALVNGIGCLSGMATPYIAGILT 230

Query: 763 QNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNE 801
           QN+T+LEWR+VFWIM   + +S++ + ++GSGE+Q W+ 
Sbjct: 231 QNRTVLEWRLVFWIMMAVMTVSSLVYAIYGSGELQPWDN 269

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307170758|gb|EFN62883.1| Putative inorganic phosphate cotransporter [Camponotus floridanus]

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 119/259 (45%), Positives = 174/259 (67%), Gaps = 13/259 (5%)

Query: 570 LIAHSGP-----VSMTVLRFL-EGVGEDLET-----PWAAILSSLPVWSLIISEVGHDYG 618
           LI ++ P     +S   +++L E + E   T     PW  +LSS  VW+LI ++VGHD+G
Sbjct: 221 LICYNNPYEHPFISEREVKYLHERMNEHTHTKPPPVPWRHMLSSASVWALIAAQVGHDWG 280

Query: 619 FYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR 678
           F+ + +DLPKYMS V+  S+ +NG +S+LP+L+MW  S +SS LAD +I + I+SRTNVR
Sbjct: 281 FFTMVTDLPKYMSSVLHYSIQQNGFVSSLPYLVMWFCSTASSWLADRIITKGIMSRTNVR 340

Query: 679 KVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGT 738
           K+  T+ ++ PG   +AASY  C+ ++V   FTIGMA MG  Y  ++VN +DLSPN+SGT
Sbjct: 341 KLGTTIASLGPGAFIIAASYASCDGTLVVTMFTIGMAMMGTFYPGMKVNGLDLSPNYSGT 400

Query: 739 IMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQY 798
           +MAL NG+G  +G++ P  VG L  ++TL +WR+VFWI+     ++N+ FVL+ SGEVQY
Sbjct: 401 LMALVNGMGAFTGIITPYIVGVLAPDQTLSQWRLVFWIVLSFFIVTNLIFVLYASGEVQY 460

Query: 799 WNEKNGGVEINDRQELEQS 817
           WN+      I DR+E + S
Sbjct: 461 WNDPE--FVIRDREERQLS 477

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189240403|ref|XP_001809051.1| PREDICTED: similar to sodium-dependent phosphate transporter [Tribolium castaneum]

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 102/226 (45%), Positives = 163/226 (72%), Gaps = 5/226 (2%)

Query: 590 EDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF 649
           +  + PW +I++S PV +LI +++GHD+GF+ + +DLPKYM  V+  +VA+NGV S++P+
Sbjct: 257 KKRQVPWYSIMTSAPVLALIAAQIGHDWGFFTMVTDLPKYMKDVLKFNVAQNGVWSSVPY 316

Query: 650 LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIC 709
           + MWLVSM+S  + D+L+ +  LS T  RK+F T+ ++ P +  +AASY GC+  +  + 
Sbjct: 317 IFMWLVSMTSGWVCDHLVAKRYLSVTLARKIFTTIASMGPAIFIIAASYSGCDRDLAVVM 376

Query: 710 FTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLE 769
           FTI M+FMG  Y  ++VN +DL+PNF+GT+MA+ NG+G ++G++ P  VG LT++ TL++
Sbjct: 377 FTIAMSFMGSFYCGMKVNALDLAPNFAGTLMAIVNGIGAITGIIVPYLVGALTEDHTLMQ 436

Query: 770 WRVVFWIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQELE 815
           WRVVFWI F    ++N+ FV+F SGEVQ WNE     ++ D++E++
Sbjct: 437 WRVVFWIAFGVFAVTNLIFVVFASGEVQSWNE-----DLTDQKEMD 477

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	817
FB|FBgn0028513	481	CG9254 [Drosophila melanogaste	0.266	0.453	0.429	1.2e-83
FB|FBgn0010497	496	dmGlut "Dietary and metabolic	0.337	0.556	0.385	9.8e-70
UNIPROTKB|O61369	483	Picot "Putative inorganic phos	0.269	0.455	0.336	8.9e-57
UNIPROTKB|Q5ZL94	484	SLC17A5 "Uncharacterized prote	0.250	0.423	0.336	2.8e-56
ZFIN|ZDB-GENE-060929-1158	489	slc17a5 "solute carrier family	0.250	0.419	0.326	2.4e-55
UNIPROTKB|E1B7R3	495	SLC17A5 "Uncharacterized prote	0.250	0.414	0.326	1e-54
UNIPROTKB|E2R8R4	495	SLC17A5 "Uncharacterized prote	0.257	0.424	0.320	1.4e-54
FB|FBgn0030452	559	MFS10 "Major Facilitator Super	0.252	0.368	0.306	2.3e-54
UNIPROTKB|Q9NRA2	495	SLC17A5 "Sialin" [Homo sapiens	0.257	0.424	0.325	2.7e-53
RGD|1311388	495	Slc17a5 "solute carrier family	0.250	0.414	0.321	7e-53

FB|FBgn0028513 CG9254 [Drosophila melanogaster (taxid:7227)]

 Score = 546 (197.3 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
 Identities = 95/221 (42%), Positives = 151/221 (68%)

Query:   593 ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIM 652
             +TP+ AIL+S+P+W+LI +++GHD+GFY++ S LPKYMS V+  S+  NG+ S+LP++ M
Sbjct:   262 KTPFFAILTSIPMWALISAQIGHDWGFYIMVSYLPKYMSDVLRFSIKSNGLYSSLPYVTM 321

Query:   653 WLVSMSSSALADYLIVRDILSRTNVRKVFXXXXXXXXXXXXXXXSYVGCNTSMVAICFTI 712
             W++S+ S  +AD +I R+ +S TN RK+                SY GCN  MV   FTI
Sbjct:   322 WIMSLLSGCVADQMIKRNCMSTTNTRKIMTGVAAFGPAVFMVAASYAGCNRGMVVALFTI 381

Query:   713 GMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRV 772
              M  MG  YA +++ P+D+SPN++GT+MA++NG+G ++G+V+P  VG +T N TLLEWR+
Sbjct:   382 TMGLMGTYYAGMKLTPLDMSPNYAGTLMAITNGIGAITGVVSPYLVGVMTPNATLLEWRL 441

Query:   773 VFWIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQE 813
             VFW+ F  L ++ + + ++ SG+VQ +N+   G   N +++
Sbjct:   442 VFWVAFGVLVVTAIVYCIWASGDVQPFND---GTNSNKKKD 479

GO:0005436 "sodium:phosphate symporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0010497 dmGlut "Dietary and metabolic glutamate transporter" [Drosophila melanogaster (taxid:7227)]

 Score = 560 (202.2 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
 Identities = 111/288 (38%), Positives = 180/288 (62%)

Query:   525 VILSAFYYGYILTHIPGGILSQKFGGKHTL----GLGFLSTAIFTLLTPLIAHSGP-VSM 579
             ++L     G I+ ++  G+    +G +       GLG +  AIF  L      S P +  
Sbjct:   179 LVLGGGQVGTIMGNLLSGVFIDAYGWEFVFYFFGGLGVVWFAIFMFLCYSDPTSHPFIKP 238

Query:   580 TVLRFL-EGVG-----EDLE-TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQ 632
             +   +L + +G     EDL  TPW AIL++LP+++L+ +++GHD+GFY++ +DLPKYM+ 
Sbjct:   239 SEREYLVKEIGTISRNEDLPPTPWKAILTNLPMFALVAAQIGHDWGFYIMVTDLPKYMAD 298

Query:   633 VIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFXXXXXXXXXXX 692
             V+  S+  NG+ S+LP+++MW+VS+ S  +AD++I R +LS TN RKV            
Sbjct:   299 VLQFSIKANGLYSSLPYVMMWIVSVGSGFVADWMIRRGVLSTTNTRKVMTGLAAFGPAIF 358

Query:   693 XXXXSYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGM 752
                 SY GC+  +V + FTI M  MG  YA ++++P+D+SPN++GT+MA++NG+G ++G+
Sbjct:   359 MVGASYAGCDRVLVVVLFTICMGLMGAYYAGMKLSPLDMSPNYAGTLMAITNGIGAITGV 418

Query:   753 VAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWN 800
             + P  VG +T N +LLEWR+VFW+ F  L  + V + ++ SGEVQ +N
Sbjct:   419 ITPYLVGVMTPNASLLEWRLVFWVAFGVLCFTAVIYCIWASGEVQPFN 466

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0007005 "mitochondrion organization" evidence=IGI;IMP

GO:0006541 "glutamine metabolic process" evidence=IGI;IMP

GO:0015319 "sodium:inorganic phosphate symporter activity" evidence=IDA

GO:0044341 "sodium-dependent phosphate transport" evidence=IMP;IDA

GO:0051938 "L-glutamate import" evidence=IDA

GO:0005314 "high-affinity glutamate transmembrane transporter activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0015321 "sodium-dependent phosphate transmembrane transporter activity" evidence=IMP

UNIPROTKB|O61369 Picot "Putative inorganic phosphate cotransporter" [Drosophila ananassae (taxid:7217)]

 Score = 393 (143.4 bits), Expect = 8.9e-57, Sum P(2) = 8.9e-57
 Identities = 76/226 (33%), Positives = 132/226 (58%)

Query:   595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
             P+ +I+ SLP ++++ + +GH+YG+  + ++LP YM QV+  S+  NG+LS+LP+L MWL
Sbjct:   240 PFKSIVKSLPFYAILFAHMGHNYGYETLMTELPTYMKQVLRFSLKSNGLLSSLPYLAMWL 299

Query:   655 VSMSSSALADYLIVRDILSRTNVRKVFXXXXXXXXXXXXXXXSYVGCNTSMVAICFTIGM 714
             +SM  S +AD++I     S T  RK+                SY GC+ ++     TIG+
Sbjct:   300 LSMFISVIADWMISSKRFSLTATRKIINSIGQYGPGLALIAASYTGCDRALTLAILTIGV 359

Query:   715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN--KTLL-EWR 771
                G  Y+  ++N +DL+P F+G +M+++N    ++G++AP+  G L  +  K ++ +W+
Sbjct:   360 GLNGGIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLLAPIAAGNLISDPSKPVMGQWQ 419

Query:   772 VVFWIMFLTLFISNVFFVLFGSGEVQYWNEKNGGVEINDRQELEQS 817
             +VF+I      I   F+ +FGSGE Q+W+  +   E   +  LE S
Sbjct:   420 IVFFIAAFVYIICGTFYNIFGSGERQFWDNPS---EDEQKPALESS 462

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=NAS

GO:0006817 "phosphate ion transport" evidence=NAS

GO:0016021 "integral to membrane" evidence=NAS

UNIPROTKB|Q5ZL94 SLC17A5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 376 (137.4 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
 Identities = 69/205 (33%), Positives = 109/205 (53%)

Query:   595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
             PW  IL SLP+W+++++   +++ FY + + LP YM +++     ENG LSALP+   WL
Sbjct:   270 PWRPILESLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFDAQENGFLSALPYFGCWL 329

Query:   655 VSMSSSALADYLIVRDILSRTNVRKVFXXXXXXXXXXXXXXXSYVGCNTSMVAICFTIGM 714
               + S  +AD+L  +   S   VRK F                ++GCN  +     TI  
Sbjct:   330 CIILSGQIADHLREKQNFSTVCVRKCFTLIGMIGPAVFLVAAGFIGCNYELAVAFVTIST 389

Query:   715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
                GFC +   +N +D++P+++G ++ ++N    + GMV P+    LT N T+ EW+ VF
Sbjct:   390 TLGGFCTSGYSINHLDIAPSYAGILLGITNSFATIPGMVGPVIAKNLTHNNTVGEWQTVF 449

Query:   775 WIMFLTLFISNVFFVLFGSGEVQYW 799
             +I         +FF LF SGEVQ W
Sbjct:   450 YIAASINLFGAIFFALFASGEVQDW 474

GO:0016021 "integral to membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

ZFIN|ZDB-GENE-060929-1158 slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Danio rerio (taxid:7955)]

 Score = 379 (138.5 bits), Expect = 2.4e-55, Sum P(2) = 2.4e-55
 Identities = 67/205 (32%), Positives = 113/205 (55%)

Query:   595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
             PW +I  S+P+W+++++   +++ FY + + LP YM+ V+G S+ +NG+LSALP+L  WL
Sbjct:   277 PWTSIFKSMPLWAIVVAHFSYNWTFYTLLTLLPTYMNDVLGFSIQQNGMLSALPYLGCWL 336

Query:   655 VSMSSSALADYLIVRDILSRTNVRKVFXXXXXXXXXXXXXXXSYVGCNTSMVAICFTIGM 714
             +++    LAD L  R +     VRK F                Y GCN  +     TI  
Sbjct:   337 LALLGGQLADLLRERFLFRTVIVRKAFTVVGMAGPAVFLVAAGYTGCNYILAVAFLTISS 396

Query:   715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
             +  G   +   +N +D++P+++G ++ ++N    + GMV P+    LT++ T+ EW++VF
Sbjct:   397 SLGGISASGFNINHLDIAPSYAGILLGITNSFATIPGMVGPVIARSLTKSNTIPEWQIVF 456

Query:   775 WIMFLTLFISNVFFVLFGSGEVQYW 799
             +I         VFF +FG G VQ W
Sbjct:   457 YISAAINIFGAVFFTIFGKGTVQPW 481

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|E1B7R3 SLC17A5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 361 (132.1 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
 Identities = 67/205 (32%), Positives = 109/205 (53%)

Query:   595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
             PW  +L SLP+W+++++   +++ FY + + LP YM +V+  ++ ENG LSA+P+L  WL
Sbjct:   281 PWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEVLRFNIQENGFLSAVPYLGCWL 340

Query:   655 VSMSSSALADYLIVRDILSRTNVRKVFXXXXXXXXXXXXXXXSYVGCNTSMVAICFTIGM 714
               + S   AD L  R   S   VR+VF                ++GC+ S+     TI  
Sbjct:   341 CMILSGQAADNLRARWNFSTLWVRRVFSLIGMIGPAIFLVAAGFIGCDYSLAVAFLTIST 400

Query:   715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
                GFC +   +N +D++P+++G ++ ++N    + GM+ P+    LT   T+ EW+ VF
Sbjct:   401 TLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMIGPIIARSLTPENTIGEWQTVF 460

Query:   775 WIMFLTLFISNVFFVLFGSGEVQYW 799
              I         +FF LF  GEVQ W
Sbjct:   461 CIAAAINVFGAIFFTLFAKGEVQNW 485

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2R8R4 SLC17A5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 370 (135.3 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
 Identities = 68/212 (32%), Positives = 117/212 (55%)

Query:   595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
             PW  +L SLP+W+++++   +++ FY + + LP YM +++  +V ENG+LSALP+   WL
Sbjct:   281 PWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGLLSALPYFGCWL 340

Query:   655 VSMSSSALADYLIVRDILSRTNVRKVFXXXXXXXXXXXXXXXSYVGCNTSMVAICFTIGM 714
               + S   AD L  +   S   VR+VF                ++GC+ S+  +  TI  
Sbjct:   341 CMILSGQAADNLRAKWNFSTICVRRVFSLIGMIGPAVFLVAAGFIGCDYSLAVVFLTIST 400

Query:   715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
                GFC +   +N +D++P+++G ++ ++N    + GMV P+    LT + T+ EW+ VF
Sbjct:   401 TLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDNTIREWQTVF 460

Query:   775 WIMFLTLFISNVFFVLFGSGEVQYW--NEKNG 804
             +I         +FF LF  GEVQ W  ++++G
Sbjct:   461 YIAAAINVFGAIFFSLFAKGEVQNWALDDRHG 492

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0030452 MFS10 "Major Facilitator Superfamily Transporter 10" [Drosophila melanogaster (taxid:7227)]

 Score = 351 (128.6 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
 Identities = 64/209 (30%), Positives = 118/209 (56%)

Query:   595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
             PW+++L+S+P+W++++++ G  + FY   ++LP YMS ++   +  N +L+A+P+L  W 
Sbjct:   340 PWSSLLTSVPLWAILLTQCGQGWAFYTQLTELPTYMSNILHFDIQSNALLNAVPYLTSWF 399

Query:   655 VSMSSSALADYLIVRDILSRTNVRKVFXXXXXXXXXXXXXXXSYVGCNTSMVAICFT-IG 713
             V ++ SALAD+++ R  +S  N  K++                YVGC+   V      +G
Sbjct:   400 VGIACSALADWMLARRYISLLNSYKLWNTVASVVPSLGLIGIIYVGCDWVWVTFMLAGVG 459

Query:   714 MAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK-TLLEWRV 772
              +F G  YA  ++N I LSP ++GT+  ++N    + G +AP  +G +  ++ TL +W +
Sbjct:   460 -SFGGAVYAGNQMNHIALSPRYAGTMYGITNSAANICGFLAPYVIGLIINHRETLTQWHL 518

Query:   773 VFWIMFLTLFISNVFFVLFGSGEVQYWNE 801
             VFW+        N  +++F S E Q W++
Sbjct:   519 VFWLAAGLNIAGNFIYLIFASAEEQSWSK 547

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9NRA2 SLC17A5 "Sialin" [Homo sapiens (taxid:9606)]

 Score = 369 (135.0 bits), Expect = 2.7e-53, Sum P(2) = 2.7e-53
 Identities = 69/212 (32%), Positives = 115/212 (54%)

Query:   595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
             PW  IL SLP+W+++++   +++ FY + + LP YM +++  +V ENG LS+LP+L  WL
Sbjct:   281 PWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWL 340

Query:   655 VSMSSSALADYLIVRDILSRTNVRKVFXXXXXXXXXXXXXXXSYVGCNTSMVAICFTIGM 714
               + S   AD L  +   S   VR++F                ++GC+ S+     TI  
Sbjct:   341 CMILSGQAADNLRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDYSLAVAFLTIST 400

Query:   715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
                GFC +   +N +D++P+++G ++ ++N    + GMV P+    LT + T+ EW+ VF
Sbjct:   401 TLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDNTVGEWQTVF 460

Query:   775 WIMFLTLFISNVFFVLFGSGEVQYW--NEKNG 804
             +I         +FF LF  GEVQ W  N+ +G
Sbjct:   461 YIAAAINVFGAIFFTLFAKGEVQNWALNDHHG 492

GO:0006865 "amino acid transport" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0030672 "synaptic vesicle membrane" evidence=IEA

GO:0016020 "membrane" evidence=TAS

GO:0005351 "sugar:hydrogen symporter activity" evidence=TAS

GO:0005765 "lysosomal membrane" evidence=IDA;TAS

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IDA

GO:0015739 "sialic acid transport" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0006820 "anion transport" evidence=TAS

GO:0006811 "ion transport" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

RGD|1311388 Slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Rattus norvegicus (taxid:10116)]

 Score = 369 (135.0 bits), Expect = 7.0e-53, Sum P(2) = 7.0e-53
 Identities = 66/205 (32%), Positives = 111/205 (54%)

Query:   595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654
             PW +IL SLP+W+++++   +++ FY + + LP YM +++  +V ENG LSALP+   WL
Sbjct:   281 PWVSILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSALPYFGCWL 340

Query:   655 VSMSSSALADYLIVRDILSRTNVRKVFXXXXXXXXXXXXXXXSYVGCNTSMVAICFTIGM 714
               +     ADYL V+   S  +VR++F                ++GC+ S+     TI  
Sbjct:   341 CMIVCGQAADYLRVKWNFSTISVRRIFSLIGMVGPAVFLVAAGFIGCDYSLAVAFLTIST 400

Query:   715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
                GF  +   +N +D++P+++G ++ ++N    + GM+ P+    LT + T+ EW+ VF
Sbjct:   401 TLGGFASSGFSINHLDIAPSYAGILLGITNTFATIPGMIGPIIAKSLTPDNTIKEWQTVF 460

Query:   775 WIMFLTLFISNVFFVLFGSGEVQYW 799
              I         +FF LF  GEVQ W
Sbjct:   461 CIAAAINVFGAIFFTLFAKGEVQNW 485

GO:0005764 "lysosome" evidence=IDA

GO:0005765 "lysosomal membrane" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=ISO;IDA

GO:0015739 "sialic acid transport" evidence=ISO;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	817
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	5e-40
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	2e-39
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	2e-15
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	2e-10
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	7e-09
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	8e-07
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	4e-06
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	5e-06
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	2e-05
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	5e-05
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	1e-04
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	1e-04
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	3e-04
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	4e-04
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	0.002
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	0.003

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score =  153 bits (389), Expect = 5e-40
 Identities = 69/209 (33%), Positives = 113/209 (54%)

Query: 594 TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMW 653
            P  AI  SLPVW++  +  GH + + ++ + LP ++S V+ +S  ENG+LS+LP+L  W
Sbjct: 252 LPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAW 311

Query: 654 LVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIG 713
           L S+ +  LAD+L     LS T  RK+F  +G + PG+ A A  Y+     +  I  T+ 
Sbjct: 312 LCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLA 371

Query: 714 MAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVV 773
            A      A + +N +DL+P F G I  ++   G + G++A    G +    +   W +V
Sbjct: 372 NAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIV 431

Query: 774 FWIMFLTLFISNVFFVLFGSGEVQYWNEK 802
           F IM     +  +F+++FGS E Q W ++
Sbjct: 432 FLIMAFVNILCVIFYLIFGSAERQDWAKE 460

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score =  152 bits (386), Expect = 2e-39
 Identities = 72/256 (28%), Positives = 114/256 (44%), Gaps = 42/256 (16%)

Query: 186 EGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLS 245
           +        P  AI  SLPVW++  +  GH +   ++ T LP ++S V+ +S  ENG+LS
Sbjct: 244 QKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLS 303

Query: 246 ALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSM 305
           +LP+L  WL S+ +  LADF  +   LS T  RK+F  +G + PG+ A A  Y+     +
Sbjct: 304 SLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYL 363

Query: 306 VAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365
             I  T+  A      A + +N +DL+P F G I  ++     + G +  L    L  NI
Sbjct: 364 TIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITG----LPGFIGGLIASTLAGNI 419

Query: 366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVI 425
           +S +                                        + W +VF IM    ++
Sbjct: 420 LSQDS--------------------------------------KNVWLIVFLIMAFVNIL 441

Query: 426 SNVFFVLFGSGEVQYW 441
             +F+++FGS E Q W
Sbjct: 442 CVIFYLIFGSAERQDW 457

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score = 79.4 bits (196), Expect = 2e-15
 Identities = 32/99 (32%), Positives = 53/99 (53%)

Query: 7   FPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFY 66
             +G+  PA   ++ +W+PP ERS +  +  +G QLG+ +    SG +      W  +FY
Sbjct: 143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFY 202

Query: 67  IFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSI 105
           +FG +   W   W +   +DP  HP IS+ E+KY+  S+
Sbjct: 203 VFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSL 241

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score = 63.6 bits (155), Expect = 2e-10
 Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 13/147 (8%)

Query: 449 RYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKT 508
           R  L  +  +   + +  R CL+  +  MV   K    D     +     N  +      
Sbjct: 17  RLFLSFLLHICNVIIIAQRICLSLTMVAMVN--KENSTDLACLSAENELDNIKNPN---- 70

Query: 509 YTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLT 568
                  F W    QG+ILS+ +YG I+  IP G L+ K+  K ++G+G   +++ +++ 
Sbjct: 71  -------FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVI 123

Query: 569 PLIAHSGPVSMTVLRFLEGVGEDLETP 595
           P  A  G   +   R ++G+ +   +P
Sbjct: 124 PWAAGGGIALVVFCRVIQGLAQGSVSP 150

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score = 58.6 bits (142), Expect = 7e-09
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)

Query: 40  VQLGSVLATFCS-GLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKER 98
           V   + L  FCS  L +SF     NV  I   I  L      ++   +      +S +  
Sbjct: 4   VFASTKLPYFCSFRLFLSFLLHICNVIIIAQRIC-LSLTMVAMVNKENSTDLACLSAENE 62

Query: 99  KYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGF 158
              LD+I      K+  F W    QG+ILSS +YG  +  IP G L+ K+  K ++G+G 
Sbjct: 63  ---LDNI------KNPNFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGM 113

Query: 159 LSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP 195
             +++++++ P  A  G   +   R ++G+ +   +P
Sbjct: 114 FLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSP 150

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score = 52.0 bits (125), Expect = 8e-07
 Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 9/167 (5%)

Query: 13  FPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIA 72
           FP +  ++A W P +ER+   ++  +   LG ++     G I+    SW   F I G + 
Sbjct: 100 FPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI-HFSWQWAFIIEGVLG 158

Query: 73  VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAER--RKDAKFDWDERTQGVI---L 127
           ++W   W      DP        +E KY++     AE+  +  +     +  + +    +
Sbjct: 159 IIWGVLWLKF-IPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRV 217

Query: 128 SSFYYGYTLTHIPGGILSQKFGG--KHTLGLGFLSTALLTLLTPLVA 172
                G  L +I  G     F        GL  L    +  L  +V 
Sbjct: 218 WGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVG 264

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 49.3 bits (118), Expect = 4e-06
 Identities = 38/163 (23%), Positives = 54/163 (33%), Gaps = 4/163 (2%)

Query: 10  GTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFG 69
           G  FPA   L+A W PP ER     L+ AG  LG+ L     GL+ S    W   F I  
Sbjct: 100 GALFPAAAALIADWFPPEERGRALGLLSAGFGLGAALGPLLGGLLASL-FGWRAAFLILA 158

Query: 70  AIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSS 129
            +A+L      +L    P         E              +D           ++L  
Sbjct: 159 ILALLAAVLAALLLPRPPPESKRPKPAEEAPAPLVPAWKLLLRDPVLWL---LLALLLFG 215

Query: 130 FYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVA 172
           F +   LT++P               L  L+  L  +   L+ 
Sbjct: 216 FAFFALLTYLPLYQEVLGLSALLAGLLLGLAGLLGAIGRLLLG 258

Length = 346

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 49.2 bits (118), Expect = 5e-06
 Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 12/188 (6%)

Query: 604 PVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALA 663
            +  L ++     +G+Y + + LP Y+ +V+GLS AE G+L +L  L   L ++    L+
Sbjct: 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLS 235

Query: 664 DYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYAS 723
           D         R   R++   +G +L  +G L  +       ++     +G        A 
Sbjct: 236 D---------RLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPAL 286

Query: 724 IRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFI 783
           + +      P   GT   L N  G + G + PL  G L        +  VF I+     +
Sbjct: 287 LTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG---YGGVFLILAALALL 343

Query: 784 SNVFFVLF 791
           + +  +L 
Sbjct: 344 AALLLLLL 351

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score = 47.3 bits (113), Expect = 2e-05
 Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 9/187 (4%)

Query: 598 AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSM 657
            +L    VW L + +   + G     +  P Y+ Q  GLS+ E G +++LP ++ ++   
Sbjct: 210 ELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFI--- 266

Query: 658 SSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTI---GM 714
               +     + D+L R     VFA   A++ G+      +     ++      +   G 
Sbjct: 267 ---GMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGF 323

Query: 715 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774
             +G       +   +   N +G    L N LG + G+V P+ +G +          ++ 
Sbjct: 324 FGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMV 383

Query: 775 WIMFLTL 781
                 +
Sbjct: 384 VAALALI 390

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score = 46.2 bits (110), Expect = 5e-05
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLR 583
           G + SAF +GY++   PGG L  +FG + TL +  +   +FT L         VS+ +LR
Sbjct: 32  GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG--AYVSLYILR 89

Query: 584 FLEGVGE 590
            L G  E
Sbjct: 90  VLLGAAE 96

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score = 45.0 bits (107), Expect = 1e-04
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 104 SIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTAL 163
           S  A   ++D          G + S+F +GY +   PGG L  +FG + TL +  +   +
Sbjct: 14  SFAAPMLQEDLGLSAA--QYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGV 71

Query: 164 LTLLTPLVAHSGPVSMTVLRFLEGVGE 190
            T L         VS+ +LR L G  E
Sbjct: 72  FTGLQAFAG--AYVSLYILRVLLGAAE 96

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 45.1 bits (107), Expect = 1e-04
 Identities = 53/236 (22%), Positives = 95/236 (40%), Gaps = 11/236 (4%)

Query: 521 RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMT 580
           R  G++ + F  G  L  + GG+L+  FG +    +  +   +  +L  L+    P    
Sbjct: 121 RALGLLSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILALLAAVLAALLLPRPPPESK 180

Query: 581 VLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAE 640
             +  E     L   W  +L   PV  L+++ +   + F+ + + LP Y  +V+GLS   
Sbjct: 181 RPKPAEEAPAPLVPAWKLLLRD-PVLWLLLALLLFGFAFFALLTYLPLYQ-EVLGLSALL 238

Query: 641 NGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVG 700
            G+L  L  L+  +  +    L+D L           R + A L  +L  +G    S   
Sbjct: 239 AGLLLGLAGLLGAIGRLLLGRLSDRL-------GRRRRLLLALLLLILAALGLALLSLTE 291

Query: 701 CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAP 755
            +  ++     +G    G  + ++     DL+P    GT   L N  G + G + P
Sbjct: 292 SSLWLLVALLLLGFGA-GLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALGP 346

Length = 346

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 43.6 bits (103), Expect = 3e-04
 Identities = 63/284 (22%), Positives = 104/284 (36%), Gaps = 15/284 (5%)

Query: 516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSG 575
                   G++L+AF  GY L     G LS +FG +  L +G L  A+  LL  L+  S 
Sbjct: 27  LGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLL--LLFASS 84

Query: 576 PVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIG 635
              + VLR L+G+G      + A  + +  W     E G   G       L   +  ++G
Sbjct: 85  LWLLLVLRVLQGLGGGAL--FPAAAALIADWFP-PEERGRALGLLSAGFGLGAALGPLLG 141

Query: 636 LSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA 695
             +A      A  FLI+ ++++ ++ LA  L+ R        +        ++P    L 
Sbjct: 142 GLLASLFGWRA-AFLILAILALLAAVLAALLLPRPPPESKRPKPAEEAPAPLVPAWKLLL 200

Query: 696 ASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAP 755
              V     ++      G AF         +         S  +  L  GL  + G +  
Sbjct: 201 RDPV---LWLLLALLLFGFAFFAL---LTYLPLYQEVLGLSALLAGLLLGLAGLLGAIGR 254

Query: 756 LTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYW 799
           L +G L+     L  R    +  L L ++ +   L    E   W
Sbjct: 255 LLLGRLSDR---LGRRRRLLLALLLLILAALGLALLSLTESSLW 295

Length = 346

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 43.2 bits (102), Expect = 4e-04
 Identities = 38/185 (20%), Positives = 70/185 (37%), Gaps = 15/185 (8%)

Query: 608 LIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLI 667
           L ++      G  L+   LP Y+++ +G+S  E G+L     L   L    +  L+D   
Sbjct: 1   LFLAAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSD--- 57

Query: 668 VRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVN 727
                 R   R+V   +G +L  +G L   +   +  ++ +   +     G  + +    
Sbjct: 58  ------RFGRRRVLL-IGLLLFALGLLLLLFAS-SLWLLLVLRVLQGLGGGALFPAAAAL 109

Query: 728 PIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNV 786
             D  P    G  + L +    +   + PL  G L    +L  WR  F I+ +   ++ V
Sbjct: 110 IADWFPPEERGRALGLLSAGFGLGAALGPLLGGLLA---SLFGWRAAFLILAILALLAAV 166

Query: 787 FFVLF 791
              L 
Sbjct: 167 LAALL 171

Length = 346

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 40.5 bits (95), Expect = 0.002
 Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 8/239 (3%)

Query: 116 FDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSG 175
                   G++L++F  GY L     G LS +FG +  L +G L  AL  LL  L+  S 
Sbjct: 27  LGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLL--LLFASS 84

Query: 176 PVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIG 235
              + VLR L+G+G      + A    +  W     E G   GL      L   +  ++G
Sbjct: 85  LWLLLVLRVLQGLGGGA--LFPAAAALIADWFP-PEERGRALGLLSAGFGLGAALGPLLG 141

Query: 236 LSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALA 295
             +A      A  FLI+ ++++ ++ LA   + R        +        ++P    L 
Sbjct: 142 GLLASLFGWRA-AFLILAILALLAAVLAALLLPRPPPESKRPKPAEEAPAPLVPAWKLLL 200

Query: 296 ASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVA 354
              V      + +F     A +   Y  +    + LS   +G ++ L+  LG +  ++ 
Sbjct: 201 RDPVLWLLLALLLFGFAFFALLT--YLPLYQEVLGLSALLAGLLLGLAGLLGAIGRLLL 257

Length = 346

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 40.4 bits (95), Expect = 0.003
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 10  GTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFG 69
           G  +PA   L+A+W PP ER     L  AG  LG++L     GL+      W  +F I  
Sbjct: 102 GALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES-LGWRWLFLILA 160

Query: 70  AIAVLWFAFWCIL 82
            + +L       L
Sbjct: 161 ILGLLLALLLLFL 173

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	817
KOG2532|consensus	466		100.0
KOG2532|consensus	466		99.96
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.96
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.96
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.95
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.95
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.95
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.94
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.94
PRK03545	390	putative arabinose transporter; Provisional	99.94
PRK11663	434	regulatory protein UhpC; Provisional	99.94
PRK09705	393	cynX putative cyanate transporter; Provisional	99.93
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.93
PLN00028	476	nitrate transmembrane transporter; Provisional	99.93
PRK03699	394	putative transporter; Provisional	99.93
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.93
PRK10489	417	enterobactin exporter EntS; Provisional	99.92
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.92
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.92
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.92
PRK10504	471	putative transporter; Provisional	99.92
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.91
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.91
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.91
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.91
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.91
TIGR00893	399	2A0114 d-galactonate transporter.	99.91
PRK09528	420	lacY galactoside permease; Reviewed	99.91
TIGR00891	405	2A0112 putative sialic acid transporter.	99.91
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.91
PRK10642	490	proline/glycine betaine transporter; Provisional	99.91
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.91
PRK12307	426	putative sialic acid transporter; Provisional	99.91
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.9
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.9
PRK09952	438	shikimate transporter; Provisional	99.9
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.9
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.9
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.9
PRK10091	382	MFS transport protein AraJ; Provisional	99.9
PRK03633	381	putative MFS family transporter protein; Provision	99.9
PRK15075	434	citrate-proton symporter; Provisional	99.89
TIGR00893	399	2A0114 d-galactonate transporter.	99.89
PRK11663	434	regulatory protein UhpC; Provisional	99.89
PRK03545	390	putative arabinose transporter; Provisional	99.89
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.89
PRK05122	399	major facilitator superfamily transporter; Provisi	99.89
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.89
TIGR00900	365	2A0121 H+ Antiporter protein.	99.89
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.89
PRK10054	395	putative transporter; Provisional	99.88
PRK15011	393	sugar efflux transporter B; Provisional	99.88
PRK03893	496	putative sialic acid transporter; Provisional	99.88
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.88
PRK09874	408	drug efflux system protein MdtG; Provisional	99.88
PRK11010	491	ampG muropeptide transporter; Validated	99.88
PRK11043	401	putative transporter; Provisional	99.88
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.88
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.88
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.88
PRK10133	438	L-fucose transporter; Provisional	99.88
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.87
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.87
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.87
PRK12382	392	putative transporter; Provisional	99.87
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.87
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.87
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.87
PRK10642	490	proline/glycine betaine transporter; Provisional	99.86
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.86
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.86
TIGR00898	505	2A0119 cation transport protein.	99.86
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.86
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.86
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.86
KOG2533|consensus	495		99.85
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.85
PRK09952	438	shikimate transporter; Provisional	99.85
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.85
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.85
PLN00028	476	nitrate transmembrane transporter; Provisional	99.85
PRK09705	393	cynX putative cyanate transporter; Provisional	99.85
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.85
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.85
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.85
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.85
PRK11902	402	ampG muropeptide transporter; Reviewed	99.84
PRK10091	382	MFS transport protein AraJ; Provisional	99.84
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.84
PRK10504	471	putative transporter; Provisional	99.84
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.84
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.84
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.84
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.84
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.84
TIGR00895	398	2A0115 benzoate transport.	99.84
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.84
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.83
KOG1330|consensus	493		99.83
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.83
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.82
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.82
PRK03699	394	putative transporter; Provisional	99.82
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.82
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.82
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.82
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.82
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.81
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.81
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.81
TIGR00900	365	2A0121 H+ Antiporter protein.	99.81
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.81
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.81
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.8
KOG2504|consensus	509		99.8
PRK15075	434	citrate-proton symporter; Provisional	99.8
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.8
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.79
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.79
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.79
PRK10489	417	enterobactin exporter EntS; Provisional	99.79
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.79
PRK11010	491	ampG muropeptide transporter; Validated	99.79
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.79
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.79
PRK12307	426	putative sialic acid transporter; Provisional	99.79
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.79
PRK15011	393	sugar efflux transporter B; Provisional	99.79
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.79
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.78
PRK05122	399	major facilitator superfamily transporter; Provisi	99.78
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.77
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.77
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.77
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.77
TIGR00891	405	2A0112 putative sialic acid transporter.	99.77
TIGR00895	398	2A0115 benzoate transport.	99.77
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.77
KOG2533|consensus	495		99.76
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.76
PRK09874	408	drug efflux system protein MdtG; Provisional	99.76
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.76
PRK12382	392	putative transporter; Provisional	99.76
PRK11043	401	putative transporter; Provisional	99.75
PRK10133	438	L-fucose transporter; Provisional	99.74
KOG1330|consensus	493		99.74
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.74
TIGR00901	356	2A0125 AmpG-related permease.	99.74
KOG4686|consensus	459		99.74
KOG0253|consensus	528		99.74
TIGR00898	505	2A0119 cation transport protein.	99.74
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.74
PF13347	428	MFS_2: MFS/sugar transport protein	99.74
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.73
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.73
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.72
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.72
PRK10429	473	melibiose:sodium symporter; Provisional	99.72
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.72
PRK11902	402	ampG muropeptide transporter; Reviewed	99.71
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.71
TIGR00901	356	2A0125 AmpG-related permease.	99.71
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.71
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.71
PRK03633	381	putative MFS family transporter protein; Provision	99.71
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.7
KOG0252|consensus	538		99.7
PRK03893	496	putative sialic acid transporter; Provisional	99.7
KOG0569|consensus	485		99.7
PRK09669	444	putative symporter YagG; Provisional	99.7
PRK09848	448	glucuronide transporter; Provisional	99.7
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.7
PRK10054	395	putative transporter; Provisional	99.7
KOG2504|consensus	509		99.69
PRK09528	420	lacY galactoside permease; Reviewed	99.68
KOG3764|consensus	464		99.68
TIGR00805	633	oat sodium-independent organic anion transporter.	99.68
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.68
PTZ00207	591	hypothetical protein; Provisional	99.67
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.67
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.67
KOG3764|consensus	464		99.66
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.65
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.64
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.63
TIGR00805	633	oat sodium-independent organic anion transporter.	99.63
PRK11462	460	putative transporter; Provisional	99.62
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.61
COG2211	467	MelB Na+/melibiose symporter and related transport	99.6
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.59
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.59
KOG0255|consensus	521		99.58
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.57
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.57
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.56
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.54
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.54
KOG0569|consensus	485		99.52
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.51
KOG0253|consensus	528		99.5
KOG0254|consensus	513		99.5
KOG4686|consensus	459		99.48
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.46
KOG2615|consensus	451		99.45
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.43
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.41
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.38
PF13347	428	MFS_2: MFS/sugar transport protein	99.36
KOG2563|consensus	480		99.35
PTZ00207	591	hypothetical protein; Provisional	99.34
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.34
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.32
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.28
KOG0254|consensus	513		99.28
PRK09848	448	glucuronide transporter; Provisional	99.27
PRK09669	444	putative symporter YagG; Provisional	99.26
KOG0252|consensus	538		99.26
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.22
KOG2563|consensus	480		99.2
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.18
KOG0255|consensus	521		99.15
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.14
COG2211	467	MelB Na+/melibiose symporter and related transport	99.14
PRK10429	473	melibiose:sodium symporter; Provisional	99.11
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.08
KOG2615|consensus	451		99.08
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.07
KOG3626|consensus	735		99.06
PRK11462	460	putative transporter; Provisional	99.01
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.01
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.01
KOG3626|consensus	735		98.98
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	98.95
KOG3762|consensus	618		98.93
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	98.92
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	98.85
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	98.83
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	98.82
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	98.78
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.66
KOG2816|consensus	463		98.65
KOG2325|consensus	488		98.62
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	98.62
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	98.56
KOG2816|consensus	463		98.42
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.29
KOG2325|consensus	488		98.29
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.19
KOG3098|consensus	461		98.14
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	98.11
KOG4332|consensus	454		98.05
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	97.98
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	97.92
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	97.9
KOG0637|consensus	498		97.9
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	97.9
KOG3762|consensus	618		97.65
PF12832	77	MFS_1_like: MFS_1 like family	97.58
PF12832	77	MFS_1_like: MFS_1 like family	97.43
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	97.42
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	97.32
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	97.2
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	96.75
KOG1237|consensus	571		96.69
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	96.68
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	96.66
COG0477	338	ProP Permeases of the major facilitator superfamil	96.43
KOG3810|consensus	433		96.43
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	96.17
KOG3098|consensus	461		96.13
PRK03612	521	spermidine synthase; Provisional	96.03
COG0477	338	ProP Permeases of the major facilitator superfamil	96.0
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	95.7
KOG3574|consensus	510		95.66
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	95.16
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	94.72
PRK03612	521	spermidine synthase; Provisional	94.66
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	94.53
KOG3810|consensus	433		93.81
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	92.84
KOG0637|consensus	498		92.22
KOG3574|consensus	510		91.74
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	90.84
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	90.77
KOG1479|consensus	406		89.81
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	89.62
KOG1237|consensus	571		88.35
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	88.01
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	86.1
KOG1479|consensus	406		84.9
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	83.86
KOG4332|consensus	454		83.17
COG3202	509	ATP/ADP translocase [Energy production and convers	81.82

>KOG2532|consensus

Probab=100.00  E-value=1.6e-32  Score=304.25  Aligned_cols=323  Identities=38%  Similarity=0.732  Sum_probs=294.1

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~~~~   79 (817)
                      +|++||++.|..+|....+.++|.|++||++..++..++..+|++++.+++|++.+ . .||+++|++.+.+++++.+++
T Consensus       134 ~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~-s~~GW~sifY~~g~~g~i~~~~w  212 (466)
T KOG2532|consen  134 LRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE-SSLGWPSIFYVFGIVGLIWFILW  212 (466)
T ss_pred             HHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-cCCCCchHHHHHHHHHHHHHHHH
Confidence            59999999999999999999999999999999999999999999999999999999 7 999999999999999999999


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      +.+..|+|++++..+++|++.+.++..+...                                                 
T Consensus       213 ~~~~~d~P~~h~~is~~El~~I~~~k~~~~~-------------------------------------------------  243 (466)
T KOG2532|consen  213 FLFYSDSPSKHPNISEKELKYIEKGKSEAHV-------------------------------------------------  243 (466)
T ss_pred             HHHhcCCcccCCCCCHHHHHHHHhccccccc-------------------------------------------------
Confidence            9999999999999999998877665444110                                                 


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                                                   +++.+.|+++++++|.+|.+.+..++.+++++.+..|+|.|+++++|+|..
T Consensus       244 -----------------------------~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~  294 (466)
T KOG2532|consen  244 -----------------------------KKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVR  294 (466)
T ss_pred             -----------------------------CCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChh
Confidence                                         111367999999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCC-hhHHHHHHHHHHHHhh
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAIFFTIGMAFMG  318 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~g  318 (817)
                      +.|+....+.+.+.+..+++|.++||..+| .++++.+||.+..++....+++++.+.+.++. .....+.+.+..+..|
T Consensus       295 ~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g  373 (466)
T KOG2532|consen  295 ETGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSG  373 (466)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcc
Confidence            999999999999999999999999999999 78999999999999999999999999988754 4467777777778888


Q ss_pred             hccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccc
Q psy11734        319 FCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPL  398 (817)
Q Consensus       319 ~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (817)
                      ...++......+..|++.+..+|+.|++..+.+.++|.+.|.+..+                                  
T Consensus       374 ~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~----------------------------------  419 (466)
T KOG2532|consen  374 FNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTD----------------------------------  419 (466)
T ss_pred             cchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC----------------------------------
Confidence            8888888888898999999999999999999999999999887732                                  


Q ss_pred             cccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734        399 TVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI  445 (817)
Q Consensus       399 ~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (817)
                              .+.++|+.+|++.+++.+++.+++.++.+.++++|.++.
T Consensus       420 --------~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~~  458 (466)
T KOG2532|consen  420 --------NTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTKSE  458 (466)
T ss_pred             --------CCHHHHHHHHHHHHHHHHHhchheeEeecCcccCccCCc
Confidence                    124589999999999999999999999999999998753

>KOG2532|consensus

Probab=99.96  E-value=3.9e-28  Score=269.35  Aligned_cols=289  Identities=40%  Similarity=0.750  Sum_probs=266.2

Q ss_pred             cccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-
Q psy11734        513 DAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-  591 (817)
Q Consensus       513 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-  591 (817)
                      ++++++|++|.+++.+++..|+.+++++.|++.||||.|+++..+.++.++++++.+++.+.+++.+++.|++||++.| 
T Consensus        65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~  144 (466)
T KOG2532|consen   65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV  144 (466)
T ss_pred             CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence            5699999999999999999999999999999999999999999999999999999999987788899999999999999 


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~  224 (466)
T KOG2532|consen  145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP  224 (466)
T ss_pred             HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence                                                                                            


Q ss_pred             ----------------------cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH
Q psy11734        592 ----------------------LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF  649 (817)
Q Consensus       592 ----------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~  649 (817)
                                            .+.|++++++++.+|.+.+..++.+++++.+..|+|+|+++++|+|..+.|++.+++.
T Consensus       225 ~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~  304 (466)
T KOG2532|consen  225 NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPF  304 (466)
T ss_pred             CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHH
Confidence                                  1457899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCc-hHHHHHHHHHHHHHHhhhhhhhhhhc
Q psy11734        650 LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAICFTIGMAFMGFCYASIRVNP  728 (817)
Q Consensus       650 ~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (817)
                      +.+.+..+.+|.++||..+| .++.++.||++..+++...+++++.+.+.+.+ .+..+.++.+.....+...+......
T Consensus       305 l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~  383 (466)
T KOG2532|consen  305 LAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNH  383 (466)
T ss_pred             HHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhh
Confidence            99999999999999999998 88899999999999999999999999988743 35677777777788788888888888


Q ss_pred             cccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCcccccccc
Q psy11734        729 IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNEK  802 (817)
Q Consensus       729 ~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  802 (817)
                      .+..|++.+..+|+.|....+.+.++|.+.|.+.++....+|+..|++.+++.+++.+.+.++.+.++++++++
T Consensus       384 ~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~  457 (466)
T KOG2532|consen  384 QDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTKS  457 (466)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCcccCccCC
Confidence            88899999999999999999999999999999995334467999999999999999999988888888877663

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.96  E-value=3.2e-27  Score=269.07  Aligned_cols=344  Identities=29%  Similarity=0.550  Sum_probs=263.9

Q ss_pred             CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734        444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ  523 (817)
Q Consensus       444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  523 (817)
                      ...+.+|.+..++++++.+++.||.+++.+.|.|.++.+.++      ..|.   +.    .+...+....|+++++.+.
T Consensus        12 ~~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~------~~~~---~~----~~~~~~~~~~~~~~s~~~~   78 (465)
T TIGR00894        12 YFCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTD------LACL---SA----ENELDNIKNPNFKWSGALQ   78 (465)
T ss_pred             cccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCC------cccc---cc----ccccccccCCCCCCCHHHh
Confidence            456788999999999999999999999999999876221111      1111   00    0011122344899999999


Q ss_pred             HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc------------
Q psy11734        524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED------------  591 (817)
Q Consensus       524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~------------  591 (817)
                      |++.+.+.+++.+++++.|+++||+|||+++..+.+++++++++++++...+++.+++.|+++|++++            
T Consensus        79 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~  158 (465)
T TIGR00894        79 GLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVK  158 (465)
T ss_pred             hHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHh
Confidence            99999999999999999999999999999999999999999999876642268899999999999998            


Q ss_pred             -------------------------------------------------------------cC-----------------
Q psy11734        592 -------------------------------------------------------------LE-----------------  593 (817)
Q Consensus       592 -------------------------------------------------------------~~-----------------  593 (817)
                                                                                   ..                 
T Consensus       159 ~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~  238 (465)
T TIGR00894       159 WAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYIN  238 (465)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHH
Confidence                                                                         00                 


Q ss_pred             -------------chhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy11734        594 -------------TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSS  660 (817)
Q Consensus       594 -------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g  660 (817)
                                   .++++++++|.+|...+..++.....+.+.+|+|.|+++++|++..+.+...+.+.+++.++.++.|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g  318 (465)
T TIGR00894       239 SSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAG  318 (465)
T ss_pred             hhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHH
Confidence                         0245677888999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHH
Q psy11734        661 ALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIM  740 (817)
Q Consensus       661 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  740 (817)
                      +++||+++|+.......|+.....+..+..+..+.......+....+..+.+.+++.+...+.......+..|+.+|++.
T Consensus       319 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~  398 (465)
T TIGR00894       319 YLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIK  398 (465)
T ss_pred             HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHH
Confidence            99999987765442333344444443333332222222222344444444455555444455555667788899999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q psy11734        741 ALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWN  800 (817)
Q Consensus       741 g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  800 (817)
                      |+.+..+++++.++|.+.|.+.|..+.++|...|.+.++..+++.+......+.++++++
T Consensus       399 g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~  458 (465)
T TIGR00894       399 GITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSAERQDWA  458 (465)
T ss_pred             HHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecceecCCC
Confidence            999999999999999999998886533458999999999999988877766655555554

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.7e-27  Score=248.50  Aligned_cols=304  Identities=17%  Similarity=0.176  Sum_probs=260.1

Q ss_pred             CCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734        443 ESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT  522 (817)
Q Consensus       443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  522 (817)
                      +.+++.|+.+++..+++|...|+.|.+++.+.|.+.+                                   |.++|.+|
T Consensus        21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e-----------------------------------~~~lsk~~   65 (448)
T COG2271          21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIE-----------------------------------DGGLSKTQ   65 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHH-----------------------------------hcCCCHHH
Confidence            3457788999999999999999999999999999999                                   99999999


Q ss_pred             HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-----------
Q psy11734        523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-----------  591 (817)
Q Consensus       523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-----------  591 (817)
                      .|++.|.+.++|+++..+.|.++||.++|+.+.+++++.++..++.++.+  |.+.+.++-++.|...|           
T Consensus        66 lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~--s~~~~~~l~~lng~fQg~Gwpp~~~~i~  143 (448)
T COG2271          66 LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP--SLFLFAVLWVLNGWFQGMGWPPCARTIT  143 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999  99999999999888888           


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       144 ~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~  223 (448)
T COG2271         144 HWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRG  223 (448)
T ss_pred             HHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhc
Confidence                                                                                            


Q ss_pred             ---------cCc---h-----hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Q psy11734        592 ---------LET---P-----WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL  654 (817)
Q Consensus       592 ---------~~~---~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i  654 (817)
                               ...   +     .+.+++||.+|.++++..+....=+++..|.|.|+.|+.|+|...++...+++-.++++
T Consensus       224 d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~  303 (448)
T COG2271         224 DPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLP  303 (448)
T ss_pred             CchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhH
Confidence                     000   1     13468899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCc-hHHHHHHHHHHHHHHhhhhhhhhhhccccCC
Q psy11734        655 VSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAICFTIGMAFMGFCYASIRVNPIDLSP  733 (817)
Q Consensus       655 g~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (817)
                      |+++.||+|||+-+.|       |.+..++.++...+++..+...+++ .+....+++..+++.....-..-..+.|..|
T Consensus       304 G~Ll~GwlSDklfkgr-------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~p  376 (448)
T COG2271         304 GTLLAGWLSDKLFKGR-------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVP  376 (448)
T ss_pred             HHHHHHHHHHHhcccc-------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc
Confidence            9999999999986443       4455566666666666666655433 3555555555555555444444477789999


Q ss_pred             -CchHHHHHHHHHHHHH-HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        734 -NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       734 -~~~g~~~g~~~~~~~~-g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                       +..|++.|+.+.++++ |++.+....|++.|.+|   |...|+++.+.++++.+++....+
T Consensus       377 K~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g---W~g~Fi~~~~~a~l~~lll~~~~~  435 (448)
T COG2271         377 KKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG---WDGGFIVLSIAALLAILLLLPVWN  435 (448)
T ss_pred             HhhccchhchhhhHHHHhhHHhcCCcceeeEecCC---CcchHHHHHHHHHHHHHHHHHHHh
Confidence             6799999999999999 99999999999999965   989999888888888777766543

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.95  E-value=2.3e-27  Score=270.25  Aligned_cols=326  Identities=31%  Similarity=0.588  Sum_probs=254.5

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~~~~   79 (817)
                      .|+++|++++..+|....++.||+|++||++++++...+..+|.++++++++.+.+ . .|||++|++.+++++++.+++
T Consensus       137 ~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~-~~~gw~~~f~i~~~~~~~~~~~~  215 (465)
T TIGR00894       137 CRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCE-SWGGWPMIFYVFGIVGCAWSLLW  215 (465)
T ss_pred             HHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCCCeehhhhhHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999998 7 499999999999998888888


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      +.+.+|+|+++++.++++++...+....    +++                                             
T Consensus       216 ~~~~~~~p~~~~~~~~~~~~~i~~~~~~----~~~---------------------------------------------  246 (465)
T TIGR00894       216 FVFPADDPSIHPCISKFEKKYINSSLQG----QKG---------------------------------------------  246 (465)
T ss_pred             HHHhcCCcccCCCCCHHHHHHHHhhccc----ccC---------------------------------------------
Confidence            8888888876655444444332211110    000                                             


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                                                   +++.+.++++++++|.+|...+..++.....+.+.+|+|.|+++.+|++..
T Consensus       247 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~  297 (465)
T TIGR00894       247 -----------------------------STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGK  297 (465)
T ss_pred             -----------------------------CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChH
Confidence                                         001234688999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~  319 (817)
                      ++|+....+.++..++.+++|+++||.++|+...++..++.....+..+..+..+.......+.......+.+++++.+.
T Consensus       298 ~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  377 (465)
T TIGR00894       298 ENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSG  377 (465)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999988765444444455555544433333333333222333344444455555544


Q ss_pred             ccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734        320 CYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  399 (817)
Q Consensus       320 ~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (817)
                      ..+.......+..|+.+|.+.|+.|+.+++++.++|.+.|.+.|..+                                 
T Consensus       378 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~---------------------------------  424 (465)
T TIGR00894       378 PLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDS---------------------------------  424 (465)
T ss_pred             hhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC---------------------------------
Confidence            55555566678888999999999999999999999999998877531                                 


Q ss_pred             ccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCc
Q psy11734        400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILP  447 (817)
Q Consensus       400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (817)
                               ..+|+..|.+.+++.+++.+++.++.+.++++|+++.+|
T Consensus       425 ---------~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~~~~~~  463 (465)
T TIGR00894       425 ---------KNVWLIVFLIMAFVNILCVIFYLIFGSAERQDWAKEEKD  463 (465)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHeeeeecceecCCCCCccc
Confidence                     126999999999999999999999988898888865443

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.95  E-value=1.9e-26  Score=262.50  Aligned_cols=300  Identities=16%  Similarity=0.090  Sum_probs=234.2

Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                      .++.+.++.+++++++..++||..++++.|++.+                                   |+|+|+++.|+
T Consensus        24 ~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~-----------------------------------~~~~s~~~~g~   68 (467)
T PRK09556         24 FKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMIS-----------------------------------TYGLSTTELGM   68 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHH-----------------------------------hcCCCHHHHHH
Confidence            4567778899999999999999999999999999                                   99999999999


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHH-----hhhcchHHHHHHHHHHhhhcc---------
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPL-----IAHSGPVSMTVLRFLEGVGED---------  591 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~-----a~~~s~~~l~~~R~l~Gig~~---------  591 (817)
                      +.+++.+++++++++.|+++||+|||+++.++++++++++++.++     ++  +++.+++.|+++|++++         
T Consensus        69 ~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~  146 (467)
T PRK09556         69 IGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSV--SLGLMIALWALSGFFQSTGGPCSYST  146 (467)
T ss_pred             HHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHhccchHHHHH
Confidence            999999999999999999999999999999999999888887776     46  99999999999999887         


Q ss_pred             ----------------------------------------------------------------------cC--------
Q psy11734        592 ----------------------------------------------------------------------LE--------  593 (817)
Q Consensus       592 ----------------------------------------------------------------------~~--------  593 (817)
                                                                                            ++        
T Consensus       147 i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~  226 (467)
T PRK09556        147 ITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE  226 (467)
T ss_pred             HHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh
Confidence                                                                                  00        


Q ss_pred             -------ch--------------h-HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHH
Q psy11734        594 -------TP--------------W-AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLI  651 (817)
Q Consensus       594 -------~~--------------~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~  651 (817)
                             .+              + ++.+|+|.+|...+..++....++++..|+|.|+++.+|+|..+++...+...++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~  306 (467)
T PRK09556        227 IFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIG  306 (467)
T ss_pred             cccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence                   00              0 1146788899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHH-hhcCchHHHHHHHHHHHHHHhhhhhhhhhhccc
Q psy11734        652 MWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAAS-YVGCNTSMVAICFTIGMAFMGFCYASIRVNPID  730 (817)
Q Consensus       652 ~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (817)
                      +.++++++|+++||+++|+.+.          .......++...+. ....+........+..+++.............|
T Consensus       307 ~~ig~~~~G~lsDr~g~r~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~  376 (467)
T PRK09556        307 ALVGSLLWGWLSDLANGRRALV----------ACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVG  376 (467)
T ss_pred             HHHHHHHHHHHHHHHCCCchHH----------HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence            9999999999999999886421          11111112211111 122233333233333332222222222244557


Q ss_pred             cCC-CchHHHHHHHHHHHHH-HHhHHHHHHHHhhcC-C--------ccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734        731 LSP-NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQN-K--------TLLEWRVVFWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       731 ~~~-~~~g~~~g~~~~~~~~-g~~i~p~~~g~~~~~-~--------g~~~~~~~~~~~~~~~~i~~~~~~~~~  792 (817)
                      ..| +.+|++.|+.|..+++ |++++|.+.|.+.|. .        ...+|+..|+++.++.+++.+..++.+
T Consensus       377 ~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  449 (467)
T PRK09556        377 FVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA  449 (467)
T ss_pred             hcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence            788 6899999999999997 779999999999992 1        023499999999888888877776654

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.95  E-value=1.4e-27  Score=249.00  Aligned_cols=310  Identities=17%  Similarity=0.192  Sum_probs=239.6

Q ss_pred             ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhh--hhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCS--GLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~--~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      +++|..+|..+|.+...++.|||++|||+..++|+.+.++|..+.|++.  +++.. +.+||..|++.+++++++.++.+
T Consensus       125 ~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~-~~~w~~~f~~pgiiaiival~~~  203 (448)
T COG2271         125 VLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF-HGGWRAAFYFPGIIAIIVALILL  203 (448)
T ss_pred             HHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999  88888 88999999999999999999999


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +..||+|++...++.++......+..+ ++.+.+....+                                         
T Consensus       204 ~~~rd~Pqs~GLP~ie~~~~d~~e~~~-~~~~~~~ls~~-----------------------------------------  241 (448)
T COG2271         204 FLLRDRPQSEGLPPIEEYRGDPLEIYE-EEKENEGLTAW-----------------------------------------  241 (448)
T ss_pred             HHhCCCccccCCCCHHHhhcCchhhhh-hhccCCCccHH-----------------------------------------
Confidence            999999998876555443221111100 00000000000                                         


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                      ..-.+.+++||.+|.+.+..++.+..-|++..|.|.|+.|.+|+|..+
T Consensus       242 --------------------------------~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~  289 (448)
T COG2271         242 --------------------------------QIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVK  289 (448)
T ss_pred             --------------------------------HHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHH
Confidence                                            112467899999999999999999999999999999999999999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCC-hhHHHHHHHHHHHHhhh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~g~  319 (817)
                      ++...+..-++++.|++++|+++||+.+.+       |....++.++...+++......++. .....+.+.+.++....
T Consensus       290 a~~a~~lfE~agl~G~Ll~GwlSDklfkgr-------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyG  362 (448)
T COG2271         290 ANWAISLFEVAGLPGTLLAGWLSDKLFKGR-------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYG  362 (448)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHhcccc-------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999976433       2224555555555555555555433 34444444444444333


Q ss_pred             ccccccccccccCC-CchhHHHHHHHhhhhh-cccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccc
Q psy11734        320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAP  397 (817)
Q Consensus       320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~l-g~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (817)
                      ..........|+.| +..|++.|+.+.+.++ |++.+....|.+.|.+                                
T Consensus       363 PqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~--------------------------------  410 (448)
T COG2271         363 PQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW--------------------------------  410 (448)
T ss_pred             HHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC--------------------------------
Confidence            33444667788888 5799999999999999 8899999999988875                                


Q ss_pred             ccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734        398 LTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ  439 (817)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~  439 (817)
                                   +|...|++..+..+++.++.+.+.+.+++
T Consensus       411 -------------gW~g~Fi~~~~~a~l~~lll~~~~~~~~~  439 (448)
T COG2271         411 -------------GWDGGFIVLSIAALLAILLLLPVWNAEER  439 (448)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHHHhhcch
Confidence                         69999998888888777766666554433

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.94  E-value=3.9e-25  Score=234.88  Aligned_cols=300  Identities=12%  Similarity=0.116  Sum_probs=257.3

Q ss_pred             CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734        444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ  523 (817)
Q Consensus       444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  523 (817)
                      .+++..|..++.+.++.|....++......+|++.+                                   |+|+|..+.
T Consensus         6 ~~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~-----------------------------------dl~vs~~~a   50 (394)
T COG2814           6 TARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAA-----------------------------------DLGVSEGAA   50 (394)
T ss_pred             cccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHH-----------------------------------HcCCCHHHH
Confidence            345566788889999999999999999999999999                                   999999999


Q ss_pred             HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc------------
Q psy11734        524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED------------  591 (817)
Q Consensus       524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~------------  591 (817)
                      |++.|.|.++++++.|+...+.||+.||++++..+.++.++.+++++++  ||+.++++|++.|+..|            
T Consensus        51 G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp--~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~  128 (394)
T COG2814          51 GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP--SFAVLLLARALAGLAHGVFWSIAAALAAR  128 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999  99999999999999999            


Q ss_pred             ------------------------------------------------------------c-------C-ch---hHHhh
Q psy11734        592 ------------------------------------------------------------L-------E-TP---WAAIL  600 (817)
Q Consensus       592 ------------------------------------------------------------~-------~-~~---~~~~l  600 (817)
                                                                                  +       + .+   ..+++
T Consensus       129 lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~~~l  208 (394)
T COG2814         129 LVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLLRLL  208 (394)
T ss_pred             HcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCcchhHHHHHh
Confidence                                                                        1       0 11   45688


Q ss_pred             cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHH
Q psy11734        601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV  680 (817)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~  680 (817)
                      |+|+++......++...+.|..++|..++++++.|+|....++....+++++.+|+.++|+++|| +.++.+        
T Consensus       209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l--------  279 (394)
T COG2814         209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRAL--------  279 (394)
T ss_pred             cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHH--------
Confidence            99999999999999999999999999999999999999999999999999999999999999999 655543        


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHH
Q psy11734        681 FATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGF  760 (817)
Q Consensus       681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~  760 (817)
                        .....+.++.++.+.+...+.+.......+.++..............+..|+.+..+.+++....|+|...|..++|.
T Consensus       280 --~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~  357 (394)
T COG2814         280 --IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGL  357 (394)
T ss_pred             --HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              355566666666666666566555555555444444444444455566677999999999999999999999999999


Q ss_pred             hhcCCccccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734        761 LTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSG  794 (817)
Q Consensus       761 ~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~  794 (817)
                      +.|+.|   +....+..+.+.+++.+..+...+.
T Consensus       358 v~~~~g---~~~~~~~~a~l~~~a~~~~~~~~~~  388 (394)
T COG2814         358 VLDALG---YAATGWVGAALLLLALLLALLSARK  388 (394)
T ss_pred             HHHhhc---hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999976   8888888998888888777765443

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.94  E-value=2.4e-25  Score=233.18  Aligned_cols=307  Identities=18%  Similarity=0.206  Sum_probs=267.3

Q ss_pred             cccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCC
Q psy11734        440 YWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWD  519 (817)
Q Consensus       440 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  519 (817)
                      .|+...++.+++.+++.++...++++..+.+++..+.|.+                                   |+|+|
T Consensus         3 ~~~~~~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~-----------------------------------~~~LS   47 (417)
T COG2223           3 FWEARGKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKS-----------------------------------DFGLS   47 (417)
T ss_pred             hHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----------------------------------ccCCC
Confidence            3455556677888999999999999999999999999988                                   99999


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHHHHHhhhcc-------
Q psy11734        520 ERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA-HSGPVSMTVLRFLEGVGED-------  591 (817)
Q Consensus       520 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~-~~s~~~l~~~R~l~Gig~~-------  591 (817)
                      ++|.+++.++..+..++..++.|.+.||||.|++..+++++..+..+..+++. ..|++++++.+++.|++.+       
T Consensus        48 ~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~  127 (417)
T COG2223          48 EGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMP  127 (417)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccc
Confidence            99999999999999999999999999999999999999999999999999997 1134599999999999998       


Q ss_pred             ------------------------------------------------------------------------------cC
Q psy11734        592 ------------------------------------------------------------------------------LE  593 (817)
Q Consensus       592 ------------------------------------------------------------------------------~~  593 (817)
                                                                                                    ..
T Consensus       128 ~~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~  207 (417)
T COG2223         128 NASFFFPKEKQGLALGIAGAGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL  207 (417)
T ss_pred             cccccCChhhhhHHHHHhccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc
Confidence                                                                                          11


Q ss_pred             -chhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy11734        594 -TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDIL  672 (817)
Q Consensus       594 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~  672 (817)
                       .+++.+.++|+.|.+++.|+....++.++..++|.|++++++.|+.+++.+.+...+.+.+.++.+|+++||+|.+++.
T Consensus       208 ~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~  287 (417)
T COG2223         208 PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVT  287 (417)
T ss_pred             hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHH
Confidence             2345578899999999999999999999999999999999999999999999999999999999999999999988754


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhhc------CchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHH
Q psy11734        673 SRTNVRKVFATLGAVLPGVGALAASYVG------CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGL  746 (817)
Q Consensus       673 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~  746 (817)
                                ...+..+.++........      .+....+..+.....+.+..+...+..+..++|++.|.+.|+...+
T Consensus       288 ----------~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~  357 (417)
T COG2223         288 ----------LAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAI  357 (417)
T ss_pred             ----------HHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHh
Confidence                      366666666666666553      2345555556667777777788888889999999999999999999


Q ss_pred             HHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        747 GCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       747 ~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                      +.+|+..-|...|...|.+|  ++...|+.+..+.+++.+..+....
T Consensus       358 G~lGGf~lp~~~g~~~~~tg--~~~~~f~~~~~~~~~a~v~~~~~y~  402 (417)
T COG2223         358 GGLGGFFLPLAFGVSLDLTG--SYTGAFMLLLAFYLVALVLTWALYA  402 (417)
T ss_pred             ccccccchhHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999986  4899999999999998887766533

>PRK03545 putative arabinose transporter; Provisional

Probab=99.94  E-value=1.6e-24  Score=240.91  Aligned_cols=295  Identities=13%  Similarity=0.045  Sum_probs=231.0

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHH
Q psy11734        448 ARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVIL  527 (817)
Q Consensus       448 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~  527 (817)
                      ++|..++.+.++.+....+.....+..|.+.+                                   |+|+|+++.|++.
T Consensus         6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~-----------------------------------~~~~s~~~~g~~~   50 (390)
T PRK03545          6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQ-----------------------------------SFHMQTAQVGLML   50 (390)
T ss_pred             cchHHHHHHHHHHHHHHhHHHHHHcchHHHHh-----------------------------------HcCCCHHHHHHHH
Confidence            35655555555545444444455566788888                                   9999999999999


Q ss_pred             HHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc----------------
Q psy11734        528 SAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED----------------  591 (817)
Q Consensus       528 s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~----------------  591 (817)
                      +.+.+++.+++++.|.++||+|||+++..++++.+++++++++++  |++.+++.|+++|++.+                
T Consensus        51 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~  128 (390)
T PRK03545         51 TIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW--NFTVLLISRIGIAFAHAIFWSITASLAIRVAPA  128 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence            999999999999999999999999999999999999999999999  99999999999999877                


Q ss_pred             --------------------------------------------------------c------C---chhHHhhcCHhHH
Q psy11734        592 --------------------------------------------------------L------E---TPWAAILSSLPVW  606 (817)
Q Consensus       592 --------------------------------------------------------~------~---~~~~~~l~~~~~~  606 (817)
                                                                              +      +   ++.++.+|+|+++
T Consensus       129 ~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (390)
T PRK03545        129 GKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHSGSLKSLPLLFRRPALV  208 (390)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHhCcHHH
Confidence                                                                    1      0   1234677888888


Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHH
Q psy11734        607 SLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGA  686 (817)
Q Consensus       607 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~  686 (817)
                      ......++.....+....+.|.|+++..|.|..+++...+...++++++++..|+++||+++|..           ..+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-----------~~~~  277 (390)
T PRK03545        209 SLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-----------LIAI  277 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-----------HHHH
Confidence            77777777777777778889999998889999999999999999999999999999999987643           2333


Q ss_pred             HHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCc
Q psy11734        687 VLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT  766 (817)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g  766 (817)
                      .+.......+....++.+.......+.+.+.....+.......+..|+++++++|+.+...++|..+||.+.|.+.|+.|
T Consensus       278 ~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g  357 (390)
T PRK03545        278 ALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLG  357 (390)
T ss_pred             HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            33333333332222244444444444444444444445566667788899999999999999999999999999999976


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        767 LLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       767 ~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                         ++..|+..+.+.+++.+.++...+
T Consensus       358 ---~~~~~~~~~~~~~~~~~~~~~~~~  381 (390)
T PRK03545        358 ---LSSIGYVGAALALAALVWSILIFR  381 (390)
T ss_pred             ---hhHHHHHHHHHHHHHHHHHHHHcc
Confidence               889999999998888888776643

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.94  E-value=4.4e-24  Score=240.68  Aligned_cols=403  Identities=14%  Similarity=0.134  Sum_probs=266.5

Q ss_pred             hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734        201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV  280 (817)
Q Consensus       201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~  280 (817)
                      +.+.++...+..++.+...+.+..++|.+.++ +|.|..+.|++.....++..+++++.|++.||+|+|+.         
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~---------   90 (434)
T PRK11663         21 RRHILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYF---------   90 (434)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchh---------
Confidence            34445566666666666667778889988877 79999999999999999999999999999999999986         


Q ss_pred             HHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccc
Q psy11734        281 FATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVG  359 (817)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g  359 (817)
                       +..+.++..++.+.....+ +.........+.+.+.+...+.......+..| ++|++++++.+....+|+.++|.+.+
T Consensus        91 -~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~  168 (434)
T PRK11663         91 -MGIGLIATGIINILFGFSS-SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVG  168 (434)
T ss_pred             -HHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             6777777777766665544 44444444444455555555666666677666 68999999999999999999999988


Q ss_pred             eecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734        360 FLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ  439 (817)
Q Consensus       360 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~  439 (817)
                      .+.+..                                             +|++.|++.+++.++..++..++-+++++
T Consensus       169 ~l~~~~---------------------------------------------gw~~~f~~~~i~~~~~~~~~~~~~~~~p~  203 (434)
T PRK11663        169 AIALHY---------------------------------------------GWRYGMMIAGIIAIVVGLFLCWRLRDKPQ  203 (434)
T ss_pred             HHHHcc---------------------------------------------cHHHHHHHHHHHHHHHHHHHHHHcCCCHh
Confidence            876653                                             69999998887666544433333233222


Q ss_pred             cccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCC
Q psy11734        440 YWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWD  519 (817)
Q Consensus       440 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  519 (817)
                      ....+  +.                             .+                     +..+.++.    .++-   
T Consensus       204 ~~~~~--~~-----------------------------~~---------------------~~~~~~~~----~~~~---  224 (434)
T PRK11663        204 AMGLP--SV-----------------------------GE---------------------WRHDALEL----AQQQ---  224 (434)
T ss_pred             hcCCC--Cc-----------------------------cc---------------------cccccccc----chhc---
Confidence            11000  00                             00                     00000000    0000   


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchh-HH
Q psy11734        520 ERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPW-AA  598 (817)
Q Consensus       520 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~-~~  598 (817)
                                                ++  .+                    .  +.                ++.+ ..
T Consensus       225 --------------------------~~--~~--------------------~--~~----------------~~~~~~~  238 (434)
T PRK11663        225 --------------------------EG--AG--------------------L--SR----------------KEILTKY  238 (434)
T ss_pred             --------------------------cc--cC--------------------C--Ch----------------hhhHHHH
Confidence                                      00  00                    0  00                0001 13


Q ss_pred             hhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734        599 ILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR  678 (817)
Q Consensus       599 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r  678 (817)
                      .+++|++|......++....++++..|+|.|+++.+|+|..+++...+...+++.+++++.|+++||+.+++.    +..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r----~~~  314 (434)
T PRK11663        239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNR----GPM  314 (434)
T ss_pred             HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCc----cHH
Confidence            5678888888888888888888899999999988889999999999999999999999999999999953320    001


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHH
Q psy11734        679 KVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLT  757 (817)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~  757 (817)
                      ......+.....+++..+.  ..+...........+++.............|.+| +++|+++|+.+...++|+.++|.+
T Consensus       315 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~  392 (434)
T PRK11663        315 NLIFAAGILLSVGSLWLMP--FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYP  392 (434)
T ss_pred             HHHHHHHHHHHHHHHHHcc--cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhccc
Confidence            1111222222222222111  1122222222222222211112222345567776 789999999999999999999999


Q ss_pred             HHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734        758 VGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSG  794 (817)
Q Consensus       758 ~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~  794 (817)
                      .|++.|..|   |...|...+++.+++.+..+...++
T Consensus       393 ~g~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~  426 (434)
T PRK11663        393 LAKVLEIWH---WTGFFVVISIAAGISALLLLPFLNA  426 (434)
T ss_pred             HHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999875   8889999988888877766655433

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.93  E-value=1.8e-24  Score=240.52  Aligned_cols=295  Identities=17%  Similarity=0.194  Sum_probs=230.4

Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                      .+..|..+...+++.+...++ ..+++..|++.+                                   |+|+|.++.|+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~-----------------------------------~~~~s~~~~g~   48 (393)
T PRK09705          5 FPLNFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQ-----------------------------------ASGMSFSVAAL   48 (393)
T ss_pred             cchHHHHHHHHHHHHHcchhh-hccchhHHHHHH-----------------------------------HhCCCHHHHHH
Confidence            344555555555555544444 677888888888                                   99999999999


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------------
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------------  591 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------------  591 (817)
                      +.+.+.+++.+++++.|++.||+|||+++..++++++++++++++++  |++.+++.|+++|+|.+              
T Consensus        49 ~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~--~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~  126 (393)
T PRK09705         49 LTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP--QSALLLSSALLGGVGIGIIQAVMPSVIKRRF  126 (393)
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc--chHHHHHHHHHHHhHHHHHhhhhhHHHHHHc
Confidence            99999999999999999999999999999999999999999999999  99999999999999999              


Q ss_pred             ----------------------------------------------------------cC---------chhHHhhcCHh
Q psy11734        592 ----------------------------------------------------------LE---------TPWAAILSSLP  604 (817)
Q Consensus       592 ----------------------------------------------------------~~---------~~~~~~l~~~~  604 (817)
                                                                                ..         .+.++.+++|+
T Consensus       127 ~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  206 (393)
T PRK09705        127 QQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPR  206 (393)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCcCCcccccCHh
Confidence                                                                      00         11234567888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHH
Q psy11734        605 VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATL  684 (817)
Q Consensus       605 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~  684 (817)
                      .|...+..++....++++..|+|.|+++ +|.+..+++...++..+++++|++..|++.||+++|+.+          ..
T Consensus       207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~----------~~  275 (393)
T PRK09705        207 AWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLL----------ML  275 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHH----------HH
Confidence            8888888888888999999999999987 799999999999999999999999999999999987543          24


Q ss_pred             HHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccC-C-CchHHHHHHHHHHHHHHHhHHHHHHHHhh
Q psy11734        685 GAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLS-P-NFSGTIMALSNGLGCVSGMVAPLTVGFLT  762 (817)
Q Consensus       685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~  762 (817)
                      +..+..++.+.+...+.+....  ...+.+.+.+...+.......+.. | +++++..|+.+..+++++.++|.+.|++.
T Consensus       276 ~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~  353 (393)
T PRK09705        276 ALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLR  353 (393)
T ss_pred             HHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444444444443333222221  122333444444454444444444 4 67999999999999999999999999999


Q ss_pred             cCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        763 QNKTLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       763 ~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                      |..|+  |...|.+.+++.++..+..+.+++
T Consensus       354 ~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~  382 (393)
T PRK09705        354 SISGN--YLMDWAFHALCVVGLMIITLRFAP  382 (393)
T ss_pred             HHhCC--chHHHHHHHHHHHHHHHHHHHhcc
Confidence            99853  788888888887777666655543

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.93  E-value=2.7e-24  Score=236.99  Aligned_cols=310  Identities=11%  Similarity=0.050  Sum_probs=244.6

Q ss_pred             ccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccc
Q psy11734        435 SGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDA  514 (817)
Q Consensus       435 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (817)
                      +|+++.|+++-++-.++.+.+.++++++.+.+.+.+++..+.+.+                                  +
T Consensus        18 pe~~~~w~~~~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~----------------------------------~   63 (462)
T PRK15034         18 PENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNK----------------------------------I   63 (462)
T ss_pred             CCChHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------------------------------h
Confidence            666677877767777889999999999999999999998888754                                  2


Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHh-----hhcchHHHHHHHHHHhhh
Q psy11734        515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI-----AHSGPVSMTVLRFLEGVG  589 (817)
Q Consensus       515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a-----~~~s~~~l~~~R~l~Gig  589 (817)
                      |+|+|++|.+++.+++.+++++++++.|.+.||+|+|+++.++++++++.+++.+++     +  |++.+++.|++.|++
T Consensus        64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~--s~~~lli~r~l~Gig  141 (462)
T PRK15034         64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNT--PFGIFIVIALLCGFA  141 (462)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCC--CHHHHHHHHHHHHHH
Confidence            799999999999999999999999999999999999999999999999999999987     7  999999999999998


Q ss_pred             cc------------------------------------------------------------------------------
Q psy11734        590 ED------------------------------------------------------------------------------  591 (817)
Q Consensus       590 ~~------------------------------------------------------------------------------  591 (817)
                      .+                                                                              
T Consensus       142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~  221 (462)
T PRK15034        142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL  221 (462)
T ss_pred             HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence            55                                                                              


Q ss_pred             -----------c-----C---chhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHH
Q psy11734        592 -----------L-----E---TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIM  652 (817)
Q Consensus       592 -----------~-----~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~  652 (817)
                                 +     +   .+.++++|+|+.|.+.+.+++....+.++..++|.|+++.+  +.........+..+.+
T Consensus       222 iv~~i~~~~~~~~~~~~~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~  299 (462)
T PRK15034        222 AIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIG  299 (462)
T ss_pred             HHHHHHHHHhCCCccccccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHH
Confidence                       0     0   11345788999999999999999999999999999998854  4433433344567889


Q ss_pred             HHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHH-HHhhcC----chHHHHHHHHHHHHHHhhhhhhhhhh
Q psy11734        653 WLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA-ASYVGC----NTSMVAICFTIGMAFMGFCYASIRVN  727 (817)
Q Consensus       653 ~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (817)
                      .+.++++|+++||+|+++++          .+++....++... +...+.    +.+.....+.....+.+..+...+..
T Consensus       300 ~l~rplgG~LADRiG~~~vl----------~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~  369 (462)
T PRK15034        300 AIARSVGGAISDKFGGVRVT----------LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQM  369 (462)
T ss_pred             HHHHHhhHHHHHhcCchHHH----------HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHh
Confidence            99999999999999988753          2444433333322 112221    22333333333444445555555555


Q ss_pred             ccccCCC----------------------chHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHH
Q psy11734        728 PIDLSPN----------------------FSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISN  785 (817)
Q Consensus       728 ~~~~~~~----------------------~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~  785 (817)
                      +.+++|+                      +.|.+.|+.+..+.+|+++-|.+.|...+.+|.  +...|+...+..++|.
T Consensus       370 ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~--~~~~~~~~~~~~~~~~  447 (462)
T PRK15034        370 IAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGS--PVGAMKVFLIFYIVCV  447 (462)
T ss_pred             hHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCC--cHHHHHHHHHHHHHHH
Confidence            5555553                      688999999999999999999999999988854  8899999999999999


Q ss_pred             HHHHHhccC
Q psy11734        786 VFFVLFGSG  794 (817)
Q Consensus       786 ~~~~~~~~~  794 (817)
                      ++.++...+
T Consensus       448 ~~~w~~y~r  456 (462)
T PRK15034        448 LLTWLVYGR  456 (462)
T ss_pred             HHHHHHhcc
Confidence            888877433

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.93  E-value=7.6e-24  Score=241.02  Aligned_cols=404  Identities=12%  Similarity=0.058  Sum_probs=261.7

Q ss_pred             HHhhchhHHHHHHH---HHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccc
Q psy11734        198 AILYSLPVWSLIIS---EVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSR  274 (817)
Q Consensus       198 ~l~~~~~~~~~~i~---~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~  274 (817)
                      ..+++++.+.....   .++.....+....+.|.+ ++.+|.|..+.+++.....++..++.++.|+++||+|+|+.   
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~---  103 (476)
T PLN00028         28 FSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYG---  103 (476)
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH---
Confidence            34555554433333   333444444444445544 55589999999998888889999999999999999999985   


Q ss_pred             hhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccc
Q psy11734        275 TNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMV  353 (817)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~  353 (817)
                             +..+.++..++.+...+.. +.........+.+.+.+...+ ......+..| ++||.++|+.+...++|+.+
T Consensus       104 -------~~~~~~~~~~~~~~~~~~~-s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~  174 (476)
T PLN00028        104 -------SAFLLMLTAPAVFCMSLVS-SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGV  174 (476)
T ss_pred             -------HHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHH
Confidence                   5566666666666555554 433333333333333332222 2334556555 79999999999999999988


Q ss_pred             cccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734        354 APLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF  433 (817)
Q Consensus       354 ~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~  433 (817)
                      ++.+.+.+.+......                                    ..+..+||+.|++.+++.++..++..++
T Consensus       175 ~~~~~~~i~~~~~~~~------------------------------------~~~~~gWr~~f~i~g~l~l~~~l~~~~~  218 (476)
T PLN00028        175 TQLLMPLVFPLIKDAG------------------------------------APSFTAWRIAFFVPGLLHIIMGILVLTL  218 (476)
T ss_pred             HHHHHHHHHHHHHhcC------------------------------------CcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            8887765443211000                                    0012379999999988877666555554


Q ss_pred             cccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccc
Q psy11734        434 GSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLD  513 (817)
Q Consensus       434 ~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (817)
                      .+++++..  . .+                             ..+                                  
T Consensus       219 ~~~~p~~~--~-~~-----------------------------~~~----------------------------------  232 (476)
T PLN00028        219 GQDLPDGN--Y-RE-----------------------------LKK----------------------------------  232 (476)
T ss_pred             cCcCCCCc--h-hh-----------------------------HHh----------------------------------
Confidence            43322110  0 00                             000                                  


Q ss_pred             ccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccC
Q psy11734        514 AKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLE  593 (817)
Q Consensus       514 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~  593 (817)
                       +-.  .                         +   ++                       +.                .
T Consensus       233 -~~~--~-------------------------~---~~-----------------------~~----------------~  242 (476)
T PLN00028        233 -SGT--M-------------------------P---KD-----------------------SF----------------S  242 (476)
T ss_pred             -cCc--c-------------------------c---cc-----------------------cH----------------H
Confidence             000  0                         0   00                       00                0


Q ss_pred             chhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Q psy11734        594 TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILS  673 (817)
Q Consensus       594 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~  673 (817)
                      ..+++.++++++|.+.+.+++.....+.+..+.|.|+.+.+|++..+++.+.+...++++++++++|+++||++||... 
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~-  321 (476)
T PLN00028        243 KVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGM-  321 (476)
T ss_pred             HHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCc-
Confidence            1245667888888888887777777788889999999988899999999999999999999999999999999987431 


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhH
Q psy11734        674 RTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMV  753 (817)
Q Consensus       674 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i  753 (817)
                        ..|++.......+.+++++++...+ +....+....+.+++.+...+..+....+..|+++|++.|+.+..+++|+.+
T Consensus       322 --~~r~~~~~~~~~l~~i~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i  398 (476)
T PLN00028        322 --RGRLWALWIVQTLGGVFCIWLGRAN-SLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVL  398 (476)
T ss_pred             --chhHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHH
Confidence              2245555555555544444443332 3333333334444444445555666677788899999999998888888888


Q ss_pred             HHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734        754 APLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSG  794 (817)
Q Consensus       754 ~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~  794 (817)
                      +|.+.+    ..+..+|+..|+..+++.+++.++.++.+.+
T Consensus       399 ~~~l~~----~~~~~~y~~~f~~~~~~~~i~~~~~~~~~~~  435 (476)
T PLN00028        399 TQLLFF----TGSSYSTETGISLMGVMIIACTLPVAFIHFP  435 (476)
T ss_pred             HHHHHH----hcCCccHhhHHHHHHHHHHHHHHHHHheecc
Confidence            887754    2222358899999999988888877776533

>PRK03699 putative transporter; Provisional

Probab=99.93  E-value=6.5e-24  Score=236.35  Aligned_cols=300  Identities=14%  Similarity=0.073  Sum_probs=239.9

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734        447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI  526 (817)
Q Consensus       447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~  526 (817)
                      ++||++.+.++++++....+...++...|++.+                                   |+|+|+++.+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~-----------------------------------~~~~s~~~~g~~   47 (394)
T PRK03699          3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAE-----------------------------------YFNLPVSSMSNT   47 (394)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH-----------------------------------HhCCCHHHHHHH
Confidence            567888889999999999999999999999998                                   999999999999


Q ss_pred             HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------------
Q psy11734        527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---------------  591 (817)
Q Consensus       527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---------------  591 (817)
                      .+.+.+++.+++++.|++.||+|||+++..+.++.+++.+++++++  +++.+++.|+++|++.+               
T Consensus        48 ~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~  125 (394)
T PRK03699         48 FTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYE  125 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcc
Confidence            9999999999999999999999999999999999999999999999  99999999999999887               


Q ss_pred             --------------------------------------------------------cCch---------hH---HhhcCH
Q psy11734        592 --------------------------------------------------------LETP---------WA---AILSSL  603 (817)
Q Consensus       592 --------------------------------------------------------~~~~---------~~---~~l~~~  603 (817)
                                                                              .+.|         .+   +...+|
T Consensus       126 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  205 (394)
T PRK03699        126 GKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPALGKHAPKADKPVAKEKWGI  205 (394)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCccccccCccccCccccccCCh
Confidence                                                                    0000         00   011235


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHH
Q psy11734        604 PVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFAT  683 (817)
Q Consensus       604 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~  683 (817)
                      +++...+..++....++.+..|+|.|+++.+|+|+.+++.+.+...++..+|+++.|+++||+++|+.+          .
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l----------~  275 (394)
T PRK03699        206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRIL----------T  275 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHH----------H
Confidence            567777777888888889999999999998999999999999999999999999999999999988653          2


Q ss_pred             HHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734        684 LGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  763 (817)
Q Consensus       684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~  763 (817)
                      ....+..+.+.++...+ +........+..+++.+..++.......+..|+.+++..|......++|+.++|.+.|++.|
T Consensus       276 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~  354 (394)
T PRK03699        276 VLAGLALVLMYLFVNTD-DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVA  354 (394)
T ss_pred             HHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            33333334444443333 34333344444555555555666666667777777888899999999999999999999999


Q ss_pred             CCccccHHHHHHHHHHHHHHHHHHHHHhccCccc
Q psy11734        764 NKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQ  797 (817)
Q Consensus       764 ~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  797 (817)
                      ..|   ++..++..+++..++.+.+....+.+|+
T Consensus       355 ~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (394)
T PRK03699        355 HFG---LQAALLTANGLYAVVFVMCILLGFVSKH  385 (394)
T ss_pred             HhC---chhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            875   6788888888877776666665444443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.93  E-value=4.7e-24  Score=238.47  Aligned_cols=288  Identities=18%  Similarity=0.212  Sum_probs=221.9

Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                      +|.+|.+..+++++++.+++||.+++.+.|.+.+                                   |+|+|+++.|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~-----------------------------------~~~~s~~~~g~   47 (412)
T TIGR02332         3 KKLFRRLIIFLFILFIFSFLDRINIGFAGLTMGK-----------------------------------DLGLSATMFGL   47 (412)
T ss_pred             eeehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHh-----------------------------------hcCCCHHHHHH
Confidence            3457889999999999999999999999999888                                   99999999999


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------------
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------------  591 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------------  591 (817)
                      +.+++.+++++++++.|+++||+|||+++..++++++++++++++++  |++.+++.|+++|++.+              
T Consensus        48 ~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~  125 (412)
T TIGR02332        48 AATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT--GPESLYLLRILVGIAEAGFLPGILLYLTFWF  125 (412)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999  99999999999999998              


Q ss_pred             ----------------------------------------------------------------cCch----h-----H-
Q psy11734        592 ----------------------------------------------------------------LETP----W-----A-  597 (817)
Q Consensus       592 ----------------------------------------------------------------~~~~----~-----~-  597 (817)
                                                                                      ++.+    +     + 
T Consensus       126 ~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~  205 (412)
T TIGR02332       126 PAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKK  205 (412)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHH
Confidence                                                                            0000    0     0 


Q ss_pred             -------------------------------HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-hCCChhHHHHHH
Q psy11734        598 -------------------------------AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQV-IGLSVAENGVLS  645 (817)
Q Consensus       598 -------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-~g~s~~~~~~~~  645 (817)
                                                     +.+++|.+|...+.+++....++++.+|+|.|+++. .|.+..+++...
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~  285 (412)
T TIGR02332       206 ALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLA  285 (412)
T ss_pred             HHHHHHHhccccccccccccccccccHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHh
Confidence                                           001234566677778888888999999999999883 467888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhh
Q psy11734        646 ALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIR  725 (817)
Q Consensus       646 ~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (817)
                      .+..+++.+|++..|+++||+++|+..         .........+.+++..... +............++.....+..+
T Consensus       286 ~~~~l~~~~g~l~~g~l~dr~~~r~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~  355 (412)
T TIGR02332       286 AIPQFCTIFGMIWWSRHSDRLKERKHH---------TALPYLFAAAGWLLASATD-HNLIQLLGIIMASMGSFSAMAIFW  355 (412)
T ss_pred             hHHHHHHHHHHHHHHHHhcccCccHHH---------HHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHhhhhhhHHH
Confidence            999999999999999999999976421         1122233333332222222 222222222222222222223333


Q ss_pred             hhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHH
Q psy11734        726 VNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLF  782 (817)
Q Consensus       726 ~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~  782 (817)
                      ....+..| ++|+++.|+.+..+++|++++|.+.|.+.|..|  +|+..++.++++.+
T Consensus       356 ~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g--~~~~~~~~~~~~~~  411 (412)
T TIGR02332       356 TTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG--SFNSGLWFVAALLV  411 (412)
T ss_pred             hhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC--CCchhHHHHHHHHh
Confidence            44456666 789999999999999999999999999999874  38888877666543

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.92  E-value=3.9e-23  Score=232.04  Aligned_cols=384  Identities=13%  Similarity=0.043  Sum_probs=260.8

Q ss_pred             hHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccc
Q psy11734        195 PWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSR  274 (817)
Q Consensus       195 ~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~  274 (817)
                      |++.+.|||++....+..++............|.+.++ .+.++.+.|+......++..+++++.|+++||++||+.   
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~---   84 (417)
T PRK10489          9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKL---   84 (417)
T ss_pred             HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceE---
Confidence            34455679999988888888888888888889988877 57799999999999999999999999999999999986   


Q ss_pred             hhhHHHHHHHHhHHHHHHHHhhh---cc-CCChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhh
Q psy11734        275 TNVRKVFATLGAVLPGVGALAAS---YV-GCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCV  349 (817)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~l  349 (817)
                             +..+..+..++...+.   +. .++.+.......+.+.+.+...+.......+.. +++++++.++.+...++
T Consensus        85 -------l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (417)
T PRK10489         85 -------ILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRL  157 (417)
T ss_pred             -------EEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhH
Confidence                   3444443333333221   11 223334444444444444444455555555544 47899999999999999


Q ss_pred             cccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhh
Q psy11734        350 SGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVF  429 (817)
Q Consensus       350 g~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~  429 (817)
                      |..+||.+.+.+.+..                                             +|++.|++.++..+++.++
T Consensus       158 g~~~g~~l~g~l~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~  192 (417)
T PRK10489        158 GSVISPALGGLLIAAG---------------------------------------------GVAWNYGLAAAGTFITLLP  192 (417)
T ss_pred             HHHhHHHHHHHHHHHH---------------------------------------------hhHHHHHHHHHHHHHHHHH
Confidence            9999999999887654                                             5888888877776666555


Q ss_pred             heeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccc
Q psy11734        430 FVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTY  509 (817)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (817)
                      ...+++.++++  ++  +                               +                              
T Consensus       193 ~~~l~~~~~~~--~~--~-------------------------------~------------------------------  207 (417)
T PRK10489        193 LLRLPALPPPP--QP--R-------------------------------E------------------------------  207 (417)
T ss_pred             HHhCCCCCCCC--cc--c-------------------------------c------------------------------
Confidence            44332211100  00  0                               0                              


Q ss_pred             ccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhh
Q psy11734        510 TTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVG  589 (817)
Q Consensus       510 ~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig  589 (817)
                          ++..    +                                               .                   
T Consensus       208 ----~~~~----~-----------------------------------------------~-------------------  213 (417)
T PRK10489        208 ----HPLR----S-----------------------------------------------L-------------------  213 (417)
T ss_pred             ----cchH----H-----------------------------------------------H-------------------
Confidence                0000    0                                               0                   


Q ss_pred             cccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy11734        590 EDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVR  669 (817)
Q Consensus       590 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~  669 (817)
                         .++++.++++|.++...+..++.. ...+...+.|.|+++.+|.++.+.+.+.+...++.+++.++.+++.||.+++
T Consensus       214 ---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~  289 (417)
T PRK10489        214 ---LAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG  289 (417)
T ss_pred             ---HHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc
Confidence               012334566676655554444333 3456778899999998999999999999999999999999999999986554


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHH
Q psy11734        670 DILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC  748 (817)
Q Consensus       670 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~  748 (817)
                      +.+          ..+..+..++++++...+ +.+.......+.+.+.+...+...+..++..| +.||+++|+.+...+
T Consensus       290 ~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  358 (417)
T PRK10489        290 LLM----------LLSTLGSFLAVGLFGLMP-MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNV  358 (417)
T ss_pred             hHH----------HHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence            432          344455555555544433 34444444444555555545555577788888 679999999999999


Q ss_pred             HHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        749 VSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       749 ~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      +|+.++|.+.|.+.|..|   +...+...+++.++..++....
T Consensus       359 ~g~~~g~~l~G~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~  398 (417)
T PRK10489        359 TGDAIGAALLGGLGAMMT---PVASASASGFGLLIIGVLLLLV  398 (417)
T ss_pred             hhHhHHHHHHHHHHHHhc---hhhHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999875   5566666666555544444333

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.92  E-value=3.8e-23  Score=232.97  Aligned_cols=296  Identities=12%  Similarity=0.118  Sum_probs=214.4

Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccccc---CChhh
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFD---WDERT  522 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~  522 (817)
                      .++++..+..++++++++++|+..++.+.|.+.+                                   |++   .+..+
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~-----------------------------------~~~~~~~~~~~   61 (432)
T PRK10406         17 TRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAH-----------------------------------IFFPSGNTTTQ   61 (432)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCCCCchHH
Confidence            3456667778889999999999999999998888                                   763   55665


Q ss_pred             HHHHHHHHHHHHH---HhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchH--------HHHHHHHHHhhhcc
Q psy11734        523 QGVILSAFYYGYI---LTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPV--------SMTVLRFLEGVGED  591 (817)
Q Consensus       523 ~g~~~s~~~~~~~---i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~--------~l~~~R~l~Gig~~  591 (817)
                      .+...+.+..++.   ++++++|+++||+|||+++..++++++++++++++++  ++.        .++++|+++|+|.|
T Consensus        62 ~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~g~g  139 (432)
T PRK10406         62 LLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLP--GYETIGTWAPALLLLARLFQGLSVG  139 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcC--CchhHHHHHHHHHHHHHHHHHhhhh
Confidence            5555555555555   9999999999999999999999999999999999998  764        59999999999988


Q ss_pred             -------------------------------------------------------------------------------c
Q psy11734        592 -------------------------------------------------------------------------------L  592 (817)
Q Consensus       592 -------------------------------------------------------------------------------~  592 (817)
                                                                                                     +
T Consensus       140 ~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~  219 (432)
T PRK10406        140 GEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLD  219 (432)
T ss_pred             hhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCC
Confidence                                                                                           0


Q ss_pred             C------------chhHHhhcCHhHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHH
Q psy11734        593 E------------TPWAAILSSLPVWSLIISEVG-HDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSS  659 (817)
Q Consensus       593 ~------------~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  659 (817)
                      +            .++++++|+|+.+...+...+ ....++.+..|+|.|+++.+|++..+.+.......+...++.++.
T Consensus       220 e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~  299 (432)
T PRK10406        220 ETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLI  299 (432)
T ss_pred             CCchHHHhhhcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            0            124457777777776665554 367788999999999998889999999988888888889999999


Q ss_pred             HHHHhhhhcccccccchhhHHHHHHHHHHHHHHHH-HHH-hh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-Cc
Q psy11734        660 SALADYLIVRDILSRTNVRKVFATLGAVLPGVGAL-AAS-YV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NF  735 (817)
Q Consensus       660 g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  735 (817)
                      |+++||++||+.+          ..+..+..+... .+. .. ..+.........+..+..+...+..+...+|.+| +.
T Consensus       300 G~l~Dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~  369 (432)
T PRK10406        300 GALSDKIGRRTSM----------LCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV  369 (432)
T ss_pred             HHHHHHcCchHHH----------HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence            9999999987642          122222212211 111 11 1123322222222333333334455677889998 78


Q ss_pred             hHHHHHHHHHHHHH-HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        736 SGTIMALSNGLGCV-SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       736 ~g~~~g~~~~~~~~-g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      |+++.|+.+..++. .+...|.+.+.+ +..+  .|...++..++..+++.+..++.
T Consensus       370 r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g--~~~~~~~~~~~~~~i~~~~~~~l  423 (432)
T PRK10406        370 RALGVGLSYAVANALFGGSAEYVALSL-KSIG--METAFFWYVTLMAVVAFLVSLML  423 (432)
T ss_pred             cchhhhHHHHHHHHHHHhHHHHHHHHH-HHhC--CCcHHHHHHHHHHHHHHHHHHHh
Confidence            99999999988775 355688888854 5543  25566666666666666665554

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.92  E-value=3.2e-23  Score=231.94  Aligned_cols=295  Identities=20%  Similarity=0.125  Sum_probs=233.4

Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                      .+++|.++.++++..+...+|+..+++..|.+.+                                   |+|+|+++.|+
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~s~~~~g~   54 (406)
T PRK11551         10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQ-----------------------------------EFGLDVAQMGW   54 (406)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCCHHHHHH
Confidence            3488999999999999999999999999999988                                   99999999999


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------------
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------------  591 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------------  591 (817)
                      +.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++  +++.+++.|+++|++.+              
T Consensus        55 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~  132 (406)
T PRK11551         55 AFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAW--DFPSLLVARLLTGVGLGGALPNLIALTSEAV  132 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999  99999999999999987              


Q ss_pred             ----------------------------------------------------------cCch---------------hHH
Q psy11734        592 ----------------------------------------------------------LETP---------------WAA  598 (817)
Q Consensus       592 ----------------------------------------------------------~~~~---------------~~~  598 (817)
                                                                                ++.+               .++
T Consensus       133 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  212 (406)
T PRK11551        133 GPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRA  212 (406)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHH
Confidence                                                                      0000               011


Q ss_pred             hhcC---HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy11734        599 ILSS---LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRT  675 (817)
Q Consensus       599 ~l~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~  675 (817)
                      .+++   ++.+......++.....+....|.|.|+++ .|++..+.+...+...++.+++++..|+++||+++|+.+   
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~---  288 (406)
T PRK11551        213 LFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV---  288 (406)
T ss_pred             HhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH---
Confidence            1221   223444455556666777888899999987 699999999999999999999999999999999987643   


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHH
Q psy11734        676 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVA  754 (817)
Q Consensus       676 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~  754 (817)
                             ..+.....++++.+...+ +.+.......+.+++.....+.......|..| ++|+++.|+.+...++++.++
T Consensus       289 -------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g  360 (406)
T PRK11551        289 -------LLIYAGILASLAALAAAP-SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAG  360 (406)
T ss_pred             -------HHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHH
Confidence                   234444444444444433 44444444444444444555666677778777 789999999999999999999


Q ss_pred             HHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        755 PLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       755 p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      |.+.|.+.|+.+  ++...++....+.+++.+..+..
T Consensus       361 ~~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  395 (406)
T PRK11551        361 PLLAGQLLALGR--STVGVIGASIPVILVAALAALLL  395 (406)
T ss_pred             hhhHhhhhccCC--chHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999763  37777777777766666665554

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.92  E-value=3.3e-23  Score=234.87  Aligned_cols=307  Identities=18%  Similarity=0.190  Sum_probs=231.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734        445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG  524 (817)
Q Consensus       445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g  524 (817)
                      .++++|.++..+++.+...++||..++...|.+.+                                   + |+|+++.|
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-----------------------------------~-g~s~~~~g   66 (452)
T PRK11273         23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVE-----------------------------------Q-GFSRGDLG   66 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-----------------------------------c-CCCHHHHH
Confidence            45677888888889999999999999999988877                                   8 99999999


Q ss_pred             HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh--hcchHHHHHHHHHHhhhcc-----------
Q psy11734        525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA--HSGPVSMTVLRFLEGVGED-----------  591 (817)
Q Consensus       525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~--~~s~~~l~~~R~l~Gig~~-----------  591 (817)
                      ++.+.+.+++++++++.|+++||+|||+++..+.++++++.+++++++  ..+++.+++.|+++|++.+           
T Consensus        67 ~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~  146 (452)
T PRK11273         67 FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMV  146 (452)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence            999999999999999999999999999999999999999999998863  1167789999999998887           


Q ss_pred             --------------------------------------------------------------cCc---------------
Q psy11734        592 --------------------------------------------------------------LET---------------  594 (817)
Q Consensus       592 --------------------------------------------------------------~~~---------------  594 (817)
                                                                                    ++.               
T Consensus       147 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  226 (452)
T PRK11273        147 HWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKND  226 (452)
T ss_pred             HhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhc
Confidence                                                                          000               


Q ss_pred             -------------hhH-----HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHH
Q psy11734        595 -------------PWA-----AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVS  656 (817)
Q Consensus       595 -------------~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~  656 (817)
                                   +.+     .++|+|.+|...+..++.....+++..|+|.|++++.|++..+++....+..++.++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~  306 (452)
T PRK11273        227 YPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGT  306 (452)
T ss_pred             cccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence                         011     25577888988888888888889999999999999889999999998888999999999


Q ss_pred             HHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-C
Q psy11734        657 MSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-N  734 (817)
Q Consensus       657 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  734 (817)
                      ++.|+++||+++++.       +...+..+.+..+..+.+.... .+...........+...............|..| +
T Consensus       307 ~~~G~l~dr~~~~r~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~  379 (452)
T PRK11273        307 LLCGWMSDKVFRGNR-------GATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK  379 (452)
T ss_pred             HHHHHHHHHHccCCc-------chHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh
Confidence            999999999954321       1111122222222222222221 122222222222222221222222344567777 7


Q ss_pred             chHHHHHHHHHHHHHHHhH-HHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCccc
Q psy11734        735 FSGTIMALSNGLGCVSGMV-APLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQ  797 (817)
Q Consensus       735 ~~g~~~g~~~~~~~~g~~i-~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  797 (817)
                      .+|+++|+.+...++++.+ +|.+.|.+.|..|   |+..|++++++++++++....+.+.+++
T Consensus       380 ~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~  440 (452)
T PRK11273        380 AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVVMIGEKR  440 (452)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            8999999999999998765 7999999999976   8899998888888887777766555443

>PRK10504 putative transporter; Provisional

Probab=99.92  E-value=5e-22  Score=226.81  Aligned_cols=404  Identities=14%  Similarity=0.107  Sum_probs=266.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHH
Q psy11734        203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFA  282 (817)
Q Consensus       203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~  282 (817)
                      +.++...+..++.....+.+..++|.+.++ +|.|+.+.+++.....++..++.++.|+++||+|||+.          .
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~----------~   78 (471)
T PRK10504         10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNI----------F   78 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH----------H
Confidence            457788888888888888888999999887 89999999999999999999999999999999999985          4


Q ss_pred             HHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccccccee
Q psy11734        283 TLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL  361 (817)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l  361 (817)
                      ..+..+..++.+.....+ +.........+.+.+.+...+.......+..| ++++++.|+.+....+|..++|.+.|.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l  157 (471)
T PRK10504         79 FTAIVLFTLGSLFCALSG-TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL  157 (471)
T ss_pred             HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            555555555555444433 44444555555555555555656666666555 7899999999999999999999999988


Q ss_pred             cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccc
Q psy11734        362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYW  441 (817)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~  441 (817)
                      .++.                                             +|++.|++...+..++.+......++.+.. 
T Consensus       158 ~~~~---------------------------------------------gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~-  191 (471)
T PRK10504        158 VEYA---------------------------------------------SWHWIFLINIPVGIIGAIATLMLMPNYTMQ-  191 (471)
T ss_pred             Hhhc---------------------------------------------cHHHHHHHHHHHHHHHHHHHHHhCCCcccc-
Confidence            7754                                             699999998877776666554443322211 


Q ss_pred             cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734        442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER  521 (817)
Q Consensus       442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  521 (817)
                         .++.++.-......+.....                                                         
T Consensus       192 ---~~r~~~~~~~~~~~~~~~~~---------------------------------------------------------  211 (471)
T PRK10504        192 ---TRRFDLSGFLLLAVGMATLT---------------------------------------------------------  211 (471)
T ss_pred             ---CCCCChHHHHHHHHHHHHHH---------------------------------------------------------
Confidence               01111111111111111000                                                         


Q ss_pred             hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734        522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS  601 (817)
Q Consensus       522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~  601 (817)
                                  +..    .+  .++.|.........++.++..+......+..             . ..+....+++|
T Consensus       212 ------------~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-~~~~~~~~l~~  259 (471)
T PRK10504        212 ------------LAL----DG--SKGLGLSPLAIAGLVAVGVVALLLYLLHARN-------------N-NRALFSLKLFR  259 (471)
T ss_pred             ------------HHH----hc--CCcCCcchHHHHHHHHHHHHHHHHHHHHHhc-------------C-CCCccCHHHhc
Confidence                        000    00  0000111122222222222222221111000             0 00111235789


Q ss_pred             CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734        602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF  681 (817)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~  681 (817)
                      ||+++......++..........+.|.|+++..|.++.++++......++..++.++.|+++||+|+|+.+         
T Consensus       260 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~---------  330 (471)
T PRK10504        260 TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL---------  330 (471)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH---------
Confidence            99999888888888888777778899999988899999999998888889999999999999999987653         


Q ss_pred             HHHHHHHHHHHHHHHHhhcC-c-hHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHH
Q psy11734        682 ATLGAVLPGVGALAASYVGC-N-TSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTV  758 (817)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~  758 (817)
                       ..+..+..+..+++.+... + .+......++.+.+.+..++.......+..| +.+++++|+.++.+++|..++|.+.
T Consensus       331 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~  409 (471)
T PRK10504        331 -VATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIA  409 (471)
T ss_pred             -HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHH
Confidence             3455545554444444321 2 2222233334445555555666666656665 8899999999999999999999999


Q ss_pred             HHhhcCCc
Q psy11734        759 GFLTQNKT  766 (817)
Q Consensus       759 g~~~~~~g  766 (817)
                      |.+.+..+
T Consensus       410 g~ll~~~g  417 (471)
T PRK10504        410 GLLLGLFG  417 (471)
T ss_pred             HHHHHHhh
Confidence            99988754

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.91  E-value=2.1e-24  Score=229.35  Aligned_cols=285  Identities=15%  Similarity=0.186  Sum_probs=242.6

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|++.|+..|..++.+.++..|..|++||++++++...+..++.++|.++|.++.+ .+|||+.|++.++++++..+..+
T Consensus       107 aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~-~~GWR~~F~~ia~l~ll~~~~~~  185 (394)
T COG2814         107 ARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ-LFGWRATFLAIAVLALLALLLLW  185 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHH
Confidence            38999999999999999999999999999999999999999999999999999999 99999999999999999999999


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +.+|  |++.+...+.                                                                
T Consensus       186 ~~lP--~~~~~~~~~~----------------------------------------------------------------  199 (394)
T COG2814         186 KLLP--PSEISGSLPG----------------------------------------------------------------  199 (394)
T ss_pred             HhCC--CccCCCCCCc----------------------------------------------------------------
Confidence            9888  2111100000                                                                


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                     +..+..+++|+|+++...+..++...+.|+..+|+-++++++.|+|...
T Consensus       200 -------------------------------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~  248 (394)
T COG2814         200 -------------------------------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA  248 (394)
T ss_pred             -------------------------------chhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH
Confidence                                           0112568899999999999999999999999999999999999999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      .++....+++++++|..++|+++|| +.|+.          ......+..+.+..+.+..++.........+.++.....
T Consensus       249 vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~----------l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~  317 (394)
T COG2814         249 VSLVLLAFGIAGFIGNLLGGRLADR-GPRRA----------LIAALLLLALALLALTFTGASPALALALLFLWGFAFSPA  317 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccc-cchhH----------HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhh
Confidence            9999999999999999999999999 77664          566666667777777777666666666666666666666


Q ss_pred             cccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccc
Q psy11734        321 YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTV  400 (817)
Q Consensus       321 ~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (817)
                      .+.......+..|+++..+.+++....|+|.+.|..++|.+.|+.                                   
T Consensus       318 ~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-----------------------------------  362 (394)
T COG2814         318 LQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-----------------------------------  362 (394)
T ss_pred             hhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------------------------------
Confidence            666666667777899999999999999999999999999999985                                   


Q ss_pred             cccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734        401 GFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ  439 (817)
Q Consensus       401 ~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~  439 (817)
                                ++....+..+++.+++..+.+...+.+++
T Consensus       363 ----------g~~~~~~~~a~l~~~a~~~~~~~~~~~~~  391 (394)
T COG2814         363 ----------GYAATGWVGAALLLLALLLALLSARKDRR  391 (394)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence                      68999999999999999888776655443

>TIGR00897 2A0118 polyol permease family

Probab=99.91  E-value=7.4e-22  Score=220.37  Aligned_cols=381  Identities=15%  Similarity=0.102  Sum_probs=252.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734        202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF  281 (817)
Q Consensus       202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~  281 (817)
                      .+++....+..++.....+....++|.++++ +|.|+.+.|+......++..++.++.|++.||+|||+.          
T Consensus        12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~----------   80 (402)
T TIGR00897        12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKT----------   80 (402)
T ss_pred             CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH----------
Confidence            4566777777777777777777888998866 79999999999999999999999999999999999986          


Q ss_pred             HHHHhHHHHHHHHhhh---ccCCChhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhcc-ccccc
Q psy11734        282 ATLGAVLPGVGALAAS---YVGCNTSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSG-MVAPL  356 (817)
Q Consensus       282 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~-~~~~~  356 (817)
                      ...+..+..++.....   ...++.........+.+.+.+...+.......+ .++++|++++|+.+....+|. ..+|.
T Consensus        81 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~  160 (402)
T TIGR00897        81 MMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSY  160 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5566666555544332   222233333333333333333333333333444 566899999999999999886 57888


Q ss_pred             ccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734        357 TVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG  436 (817)
Q Consensus       357 i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~  436 (817)
                      +.+.+.+..                                             +|+..++.......++.++..++.++
T Consensus       161 ~~~~l~~~~---------------------------------------------g~~~~~~~~~~~~~~~~~~~~~~~~~  195 (402)
T TIGR00897       161 YSSYAIPAF---------------------------------------------GEMNTLWSALAFVLTGGVIALFSNKD  195 (402)
T ss_pred             HHHhccccc---------------------------------------------chHHHHHHHHHHHHHHHHHHHhccCC
Confidence            877776654                                             23333333332222333333333222


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccc
Q psy11734        437 EVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKF  516 (817)
Q Consensus       437 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  516 (817)
                      ++++.+++  +                               +                                  ++.
T Consensus       196 ~~~~~~~~--~-------------------------------~----------------------------------~~~  208 (402)
T TIGR00897       196 IFTPQHMQ--T-------------------------------R----------------------------------EKF  208 (402)
T ss_pred             CCCccccc--C-------------------------------C----------------------------------cch
Confidence            21110000  0                               0                                  000


Q ss_pred             cCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchh
Q psy11734        517 DWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPW  596 (817)
Q Consensus       517 ~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~  596 (817)
                        ++  .                                                                     .+++
T Consensus       209 --~~--~---------------------------------------------------------------------~~~~  215 (402)
T TIGR00897       209 --SE--L---------------------------------------------------------------------GKAA  215 (402)
T ss_pred             --hh--H---------------------------------------------------------------------HHHH
Confidence              00  0                                                                     0113


Q ss_pred             HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccch
Q psy11734        597 AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTN  676 (817)
Q Consensus       597 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~  676 (817)
                      ++++|+|++|...+..++.....+++.+|.|.|+++ +|++..+.+.......+++.++++..|+++||++||+..    
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~----  290 (402)
T TIGR00897       216 TILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV----  290 (402)
T ss_pred             HHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH----
Confidence            456788999988888888888999999999999876 899999999988899999999999999999999987542    


Q ss_pred             hhHHHHHHHHHHHHHHHHHHH---h-hcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHh
Q psy11734        677 VRKVFATLGAVLPGVGALAAS---Y-VGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGM  752 (817)
Q Consensus       677 ~r~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~  752 (817)
                           ...+.....++.+.+.   . ..++.+.......+.+.+.+...+ ......+..|++||++.|+.|...++++.
T Consensus       291 -----~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~  364 (402)
T TIGR00897       291 -----RWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAF  364 (402)
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHH
Confidence                 1122222222211111   1 112333333334444444443333 34455677888999999999999999999


Q ss_pred             HHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734        753 VAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       753 i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~  792 (817)
                      ++|.+.|.+.|..|   +...+++.+++.+++.+...+.|
T Consensus       365 ~gp~i~g~l~~~~g---~~~~~~~~a~~~~i~~~~~~~~~  401 (402)
T TIGR00897       365 LAPAIAVLFIGFFG---AIGVVWIFAALYVVSAFLTAFIR  401 (402)
T ss_pred             HHHHHHHHHHhhcc---hHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999875   77888888888888877776653

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.91  E-value=1.4e-22  Score=228.86  Aligned_cols=406  Identities=15%  Similarity=0.155  Sum_probs=255.9

Q ss_pred             hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734        201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV  280 (817)
Q Consensus       201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~  280 (817)
                      +++.++...+...+.+.....+..+.| ++++ +|+|+.+.++......++..+++++.|+++||+|||+.         
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~---------   93 (438)
T TIGR00712        25 RWQVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVF---------   93 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCcee---------
Confidence            344455555555555555555566666 4555 49999999999999999999999999999999999886         


Q ss_pred             HHHHHhHHHHHHHHhhhccC---CChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhhccccccc
Q psy11734        281 FATLGAVLPGVGALAASYVG---CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPL  356 (817)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~  356 (817)
                       +..+..+..++.......+   ++.....+...+.+.+.+...+.......+.. +++|++++++.+....+|+.+++.
T Consensus        94 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~  172 (438)
T TIGR00712        94 -LPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPL  172 (438)
T ss_pred             -hHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHH
Confidence             5666666666555544332   22333333344444455555554545555655 579999999999999999999988


Q ss_pred             ccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734        357 TVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG  436 (817)
Q Consensus       357 i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~  436 (817)
                      +.+...+..                                            .+|+..|++.+++.++..+...++.|+
T Consensus       173 l~~~~~~~~--------------------------------------------~~w~~~f~~~~~~~~i~~~~~~~~~~~  208 (438)
T TIGR00712       173 LVLLGMAWF--------------------------------------------NDWHAALYFPAICAIIVALFAFAMMRD  208 (438)
T ss_pred             HHHHHHHHh--------------------------------------------hhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence            876544321                                            169999999888877766554444444


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccc
Q psy11734        437 EVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKF  516 (817)
Q Consensus       437 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  516 (817)
                      +++..+.+  +.                             .+     +++|..          ++ .+++      ++-
T Consensus       209 ~~~~~~~~--~~-----------------------------~~-----~~~~~~----------~~-~~~~------~~~  235 (438)
T TIGR00712       209 TPQSCGLP--PI-----------------------------EE-----YRNDYP----------DD-YNEK------AEQ  235 (438)
T ss_pred             CHHhcCCC--Cc-----------------------------hh-----cccccc----------cc-cccc------ccc
Confidence            33211100  00                             00     000000          00 0000      000


Q ss_pred             cCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchh
Q psy11734        517 DWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPW  596 (817)
Q Consensus       517 ~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~  596 (817)
                      +.+.                              |                    +                     .-.
T Consensus       236 ~~~~------------------------------~--------------------~---------------------~~~  244 (438)
T TIGR00712       236 ELTA------------------------------K--------------------E---------------------IFM  244 (438)
T ss_pred             ccch------------------------------H--------------------H---------------------HHH
Confidence            0000                              0                    0                     001


Q ss_pred             HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccch
Q psy11734        597 AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTN  676 (817)
Q Consensus       597 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~  676 (817)
                      +.++|+|.+|...+..++.....+++..|.|.|+++..|+|+.+++.......+.++++++++|+++||+++++..    
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~----  320 (438)
T TIGR00712       245 QYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG----  320 (438)
T ss_pred             HHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc----
Confidence            2467889999988888888888899999999999998899999999999999999999999999999999755321    


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHH-hH
Q psy11734        677 VRKVFATLGAVLPGVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSG-MV  753 (817)
Q Consensus       677 ~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~-~i  753 (817)
                         ...........++.+.+...+ .+.+......+..++..............|..| +.||+++|+.+...++++ .+
T Consensus       321 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~  397 (438)
T TIGR00712       321 ---ATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVA  397 (438)
T ss_pred             ---HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhh
Confidence               111111111112222222211 122322222222222211111111234557777 789999999999988875 68


Q ss_pred             HHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCcc
Q psy11734        754 APLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEV  796 (817)
Q Consensus       754 ~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  796 (817)
                      +|.+.|.+.|+.|   |...+.++++..+++.+..+++.+++|
T Consensus       398 gp~l~G~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (438)
T TIGR00712       398 ASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVVMIGEK  437 (438)
T ss_pred             cchhHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999999999875   788888888888888777777655443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.91  E-value=1e-24  Score=248.14  Aligned_cols=319  Identities=15%  Similarity=0.093  Sum_probs=219.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc---CcchhHHHHhhhHHHHHh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA---SWANVFYIFGAIAVLWFA   77 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~---gWr~~f~i~~~~~~i~~~   77 (817)
                      +|+++|+++|...|...++++||+|++|||+++|++..+.++|.++++++..++.+ ..   +||..|.+.+.+++++.+
T Consensus       128 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~-~~~~~~~~~~f~~~g~~~~~~~i  206 (467)
T PRK09556        128 LWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN-YFFDGHVIGMFIFPSIIALIIGF  206 (467)
T ss_pred             HHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH-hhccCcchhHHHHHHHHHHHHHH
Confidence            48899999999999999999999999999999999999999999999999887766 32   699999999988888888


Q ss_pred             hhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHH
Q psy11734         78 FWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLG  157 (817)
Q Consensus        78 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (817)
                      +.+++.+++|+++++.++++..  .+.... +..++++.+.+                                      
T Consensus       207 ~~~~~~~~~p~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~--------------------------------------  245 (467)
T PRK09556        207 IGLRYGSDSPEELGWGKAEEIF--GEPISE-EDKETESTDMT--------------------------------------  245 (467)
T ss_pred             HHHHhCCCChhhcCCCChhhcc--cCccch-hhhccccccCc--------------------------------------
Confidence            8888888888765544332210  000000 00000000000                                      


Q ss_pred             HHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCch-HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCC
Q psy11734        158 FLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP-WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGL  236 (817)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~  236 (817)
                                                        ..+. .++++|||.+|...+..++.....++...|.|.|+++.+|+
T Consensus       246 ----------------------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~  291 (467)
T PRK09556        246 ----------------------------------KWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGF  291 (467)
T ss_pred             ----------------------------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence                                              0011 22478999999999999999999999999999999998999


Q ss_pred             cccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhh-ccCCChhHHHHHHHHHH-
Q psy11734        237 SVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAAS-YVGCNTSMVAIFFTIGM-  314 (817)
Q Consensus       237 s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~-  314 (817)
                      |..++++......++..++.+++|+++||+++|+.          ......+..++...+. ...++.....+.+.+.+ 
T Consensus       292 s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  361 (467)
T PRK09556        292 SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA----------LVACIALALIIFTLGVYQHATSEYMYLASLFALGF  361 (467)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch----------HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998874          2222222222221111 12223323322222222 


Q ss_pred             HHhhhccccccccccccCC-CchhHHHHHHHhhhhh-cccccccccceecccccccCCCCCCCCCccchhhcccCccccc
Q psy11734        315 AFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVS  392 (817)
Q Consensus       315 ~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~l-g~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (817)
                      +..+... .......|..| +++|++.|+.|..+++ |++++|.+.|.+.|....           +             
T Consensus       362 ~~~~~~~-~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~-----------g-------------  416 (467)
T PRK09556        362 LVFGPQL-LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKN-----------G-------------  416 (467)
T ss_pred             HHhhHHH-HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccc-----------c-------------
Confidence            2221111 11233446555 7899999999999997 779999999999983210           0             


Q ss_pred             cccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec-ccccc
Q psy11734        393 GMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG-SGEVQ  439 (817)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~-~~~~~  439 (817)
                          ....+     ....+|+..|++.+++.+++.+.++++. +++++
T Consensus       417 ----~~~~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  455 (467)
T PRK09556        417 ----TPIFG-----YTLTGWAGTFAALDIAAIGCICLMAIVAVMEERK  455 (467)
T ss_pred             ----ccccc-----ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                00000     0023699999999999998887777664 44433

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.91  E-value=3.4e-23  Score=228.67  Aligned_cols=285  Identities=13%  Similarity=0.069  Sum_probs=225.4

Q ss_pred             HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHH
Q psy11734        450 YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSA  529 (817)
Q Consensus       450 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~  529 (817)
                      |++..+.++.......+++.+++..|++.+                                   |+|+|+++.|++.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~s~~~~g~~~s~   46 (377)
T TIGR00890         2 WWYVLVGTVIMCFTSGYVYTWTLLAPPLGR-----------------------------------YFGVGVTAVAIWFTL   46 (377)
T ss_pred             eEEEeHHHHHHHHHhhHHhhhhhHHHHHHH-----------------------------------HhCCCHHHHHHHHHH
Confidence            334445555555566668888888988888                                   999999999999999


Q ss_pred             HHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc------------------
Q psy11734        530 FYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED------------------  591 (817)
Q Consensus       530 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~------------------  591 (817)
                      +.+++.+++++.|+++||+|||+++..+.++.+++.+++++++  +++.+++.|+++|++.+                  
T Consensus        47 ~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  124 (377)
T TIGR00890        47 LLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD--SLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKR  124 (377)
T ss_pred             HHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH--HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999999999999  99999999999999987                  


Q ss_pred             -----------------------------------------------------c--C--------------chhHHhhcC
Q psy11734        592 -----------------------------------------------------L--E--------------TPWAAILSS  602 (817)
Q Consensus       592 -----------------------------------------------------~--~--------------~~~~~~l~~  602 (817)
                                                                           +  +              .+.++.+|+
T Consensus       125 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (377)
T TIGR00890       125 GLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRT  204 (377)
T ss_pred             HHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccchhhhhHHHHHcC
Confidence                                                                 0  0              012456778


Q ss_pred             HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHH
Q psy11734        603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFA  682 (817)
Q Consensus       603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~  682 (817)
                      |+++......++..........+.+.|.++ +|.+..+.+...+...+...++++..|+++||++||+.+          
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~----------  273 (377)
T TIGR00890       205 PQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTM----------  273 (377)
T ss_pred             ccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh----------
Confidence            888888777777777777777778888765 789988899999999999999999999999999988654          


Q ss_pred             HHHHHHHHHHHHHHHhhcCch-HHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHH
Q psy11734        683 TLGAVLPGVGALAASYVGCNT-SMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGF  760 (817)
Q Consensus       683 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~  760 (817)
                      ..+..+..++.+++...+... ........+.+...+...+.......|..| ++|+++.|+.+...++|+.++|.+.|.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~  353 (377)
T TIGR00890       274 SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASH  353 (377)
T ss_pred             hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence            355555555555554443211 222222333444444444555566777777 789999999999999999999999999


Q ss_pred             hhcCCccccHHHHHHHHHHHHHHHH
Q psy11734        761 LTQNKTLLEWRVVFWIMFLTLFISN  785 (817)
Q Consensus       761 ~~~~~g~~~~~~~~~~~~~~~~i~~  785 (817)
                      +.|+.|   |+..|.+.+++.+++.
T Consensus       354 l~~~~g---~~~~f~~~~~~~~~~~  375 (377)
T TIGR00890       354 ALTEIG---FEYTFIVTGAFALTSL  375 (377)
T ss_pred             HHhhhc---hhhHHHHHHHHHHHhc
Confidence            999875   8888888887777654

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.91  E-value=3.8e-22  Score=221.59  Aligned_cols=388  Identities=20%  Similarity=0.214  Sum_probs=265.0

Q ss_pred             HHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhh
Q psy11734        217 YGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAA  296 (817)
Q Consensus       217 ~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (817)
                      ...+......|. +++.+|.|..+.+++.....++..++.++.|+++||+|||+.          ...+..+..++....
T Consensus         8 ~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~----------~~~~~~~~~~~~~~~   76 (399)
T TIGR00893         8 LDRANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKT----------LAVFIVIWGVFTGLQ   76 (399)
T ss_pred             HHHHhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCccee----------eHHHHHHHHHHHHHH
Confidence            333444455555 555689999999999999999999999999999999999987          566666666666666


Q ss_pred             hccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCC
Q psy11734        297 SYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSP  375 (817)
Q Consensus       297 ~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~  375 (817)
                      .+.+ +.+...+...+.+.+.+...+.......|..| |+|++++++.+....+|..++|.+.+.+.+..          
T Consensus        77 ~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------  145 (399)
T TIGR00893        77 AFAG-AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF----------  145 (399)
T ss_pred             HHHc-CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC----------
Confidence            5554 55555555566666666667777777888776 78999999999999999999999988776653          


Q ss_pred             CCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHH
Q psy11734        376 NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIM  455 (817)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~  455 (817)
                                                         +|++.|++.+++.++..+...++.++++++......+.+.     
T Consensus       146 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  185 (399)
T TIGR00893       146 -----------------------------------SWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKY-----  185 (399)
T ss_pred             -----------------------------------CchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHh-----
Confidence                                               5999999988887766665555444432211100000000     


Q ss_pred             HHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHH
Q psy11734        456 GCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYI  535 (817)
Q Consensus       456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~  535 (817)
                                  .        ..+        ..       .                .+.                   
T Consensus       186 ------------~--------~~~--------~~-------~----------------~~~-------------------  195 (399)
T TIGR00893       186 ------------I--------VVG--------GL-------L----------------AEQ-------------------  195 (399)
T ss_pred             ------------h--------cch--------hh-------c----------------ccc-------------------
Confidence                        0        000        00       0                000                   


Q ss_pred             HhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHH
Q psy11734        536 LTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGH  615 (817)
Q Consensus       536 i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~  615 (817)
                               .++-.++                    +                   .+.+.++.+++|+++...+..++.
T Consensus       196 ---------~~~~~~~--------------------~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  227 (399)
T TIGR00893       196 ---------QGKGPST--------------------P-------------------KKYQIKELLKDRRVWGLALGQFLV  227 (399)
T ss_pred             ---------ccccccC--------------------C-------------------CccchHHHhcCHHHHHHHHHHHHH
Confidence                     0000000                    0                   112356778899999999999999


Q ss_pred             HHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHH
Q psy11734        616 DYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA  695 (817)
Q Consensus       616 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~  695 (817)
                      ......+..+.|.|+++.+|.|..+.+...+...+.++++.++.|+++||++||+...  .........+.....+....
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  305 (399)
T TIGR00893       228 NIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSL--VFARKTAIIAGLVLSLLMFA  305 (399)
T ss_pred             HhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch--hHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999985210  00000111111111111111


Q ss_pred             HHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHH
Q psy11734        696 ASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF  774 (817)
Q Consensus       696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~  774 (817)
                      ... .++.+.......+..+..+ ..+.......|..| ++|+++.|+.+...++++.++|.+.|.+.|..+  +|+..+
T Consensus       306 ~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g--~~~~~~  381 (399)
T TIGR00893       306 TNY-VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG--SFAGAL  381 (399)
T ss_pred             hcc-chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC--chhHHH
Confidence            111 1122333333333333333 56667778888887 789999999999999999999999999999874  278888


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy11734        775 WIMFLTLFISNVFFVL  790 (817)
Q Consensus       775 ~~~~~~~~i~~~~~~~  790 (817)
                      .+.+++.+++.+..+.
T Consensus       382 ~~~~~~~~~~~~~~~~  397 (399)
T TIGR00893       382 MVVAALALIGALSYLL  397 (399)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8888887777666543

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.91  E-value=1.3e-22  Score=227.94  Aligned_cols=391  Identities=12%  Similarity=0.074  Sum_probs=258.2

Q ss_pred             HHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhh
Q psy11734        198 AILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNV  277 (817)
Q Consensus       198 ~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~  277 (817)
                      +.+|||.+|...+..++...+......++|.|+++.+|+|+.+.|+......++..+++++.|+++||+|+|+.      
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~------   78 (420)
T PRK09528          5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKH------   78 (420)
T ss_pred             hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH------
Confidence            56789999999999999988888889999999999899999999999999999999999999999999999985      


Q ss_pred             HHHHHHHHhHHHHHHHHhhhc-cCCCh-h-HHHHHHHHHHHHhhhcccccccccccc---CCCchhHHHHHHHhhhhhcc
Q psy11734        278 RKVFATLGAVLPGVGALAASY-VGCNT-S-MVAIFFTIGMAFMGFCYASIRVNPIDL---SPNFSGTIMALSNGLGCVSG  351 (817)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~l~~~~~g~~~~~~~~~~~~~---~p~~~g~a~g~~~~~~~lg~  351 (817)
                          +..+..+.++....+.. ...+. . .......++....+...........+.   .+++++..+|..+....+|.
T Consensus        79 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  154 (420)
T PRK09528         79 ----LLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGW  154 (420)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHH
Confidence                33333332222211111 00000 0 011112222222222222221112222   23466778899999999999


Q ss_pred             cccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhe
Q psy11734        352 MVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFV  431 (817)
Q Consensus       352 ~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~  431 (817)
                      +++|.+.|.+.+.                                              +|+..|++.+++.++..++.+
T Consensus       155 ~i~~~~~g~l~~~----------------------------------------------~~~~~f~~~~~~~~~~~~~~~  188 (420)
T PRK09528        155 ALCAFIAGILFNI----------------------------------------------NPQINFWLGSGSALILLVLLF  188 (420)
T ss_pred             HHHHHHHHHHHhc----------------------------------------------CchHhHHHHHHHHHHHHHHHh
Confidence            9999998877653                                              478889888887777776666


Q ss_pred             eecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccc
Q psy11734        432 LFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTT  511 (817)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (817)
                      +..++++++++++..+                               +                           +    
T Consensus       189 ~~~~~~~~~~~~~~~~-------------------------------~---------------------------~----  206 (420)
T PRK09528        189 FAKPDAPSTAKVANAL-------------------------------G---------------------------A----  206 (420)
T ss_pred             cccccccchhhhccch-------------------------------h---------------------------c----
Confidence            5544432211100000                               0                           0    


Q ss_pred             ccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734        512 LDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED  591 (817)
Q Consensus       512 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~  591 (817)
                        ++...+                                                                        
T Consensus       207 --~~~~~~------------------------------------------------------------------------  212 (420)
T PRK09528        207 --NASAVS------------------------------------------------------------------------  212 (420)
T ss_pred             --cccccc------------------------------------------------------------------------
Confidence              000000                                                                        


Q ss_pred             cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734        592 LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI---GLSVAENGVLSALPFLIMWLVSMSSSALADYLIV  668 (817)
Q Consensus       592 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~  668 (817)
                       .++.++.+|+|++|...+...+....+.....+.|.|+.+..   +.+..+.+...+...+...++.+..|+++||+++
T Consensus       213 -~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~  291 (420)
T PRK09528        213 -LKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGA  291 (420)
T ss_pred             -HHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence             012345667777766666555555555556667888887653   5666778888888999999999999999999999


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHH-HHHH
Q psy11734        669 RDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMAL-SNGL  746 (817)
Q Consensus       669 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~-~~~~  746 (817)
                      |+.+          ..+..+..+...++.+.+ +++..+....+.+...+...+.......+..| +.+++..+. .+..
T Consensus       292 ~~~~----------~~~~~l~~~~~~l~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  360 (420)
T PRK09528        292 KNAL----------LLAGTIMAVRIIGSGFAT-GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFA  360 (420)
T ss_pred             chhh----------HHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHH
Confidence            8754          355555555555555543 55555544444444444444444455566556 778887665 5777


Q ss_pred             HHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734        747 GCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGE  795 (817)
Q Consensus       747 ~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  795 (817)
                      ..+|+.++|.+.|.+.|..|   |+..|...+++.++..+..+...+++
T Consensus       361 ~~lg~~ig~~~~G~l~~~~G---~~~~f~~~~~~~~i~~~~~~~~~~~~  406 (420)
T PRK09528        361 KQLGAVFLSTLAGNLYDSIG---FQGTYLILGGIVLLFTLISVFTLSGD  406 (420)
T ss_pred             HHHHHHHHHHHHHHHHHhhC---chHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            88999999999999999875   88999988888877766665554433

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.91  E-value=1e-22  Score=227.43  Aligned_cols=286  Identities=14%  Similarity=0.168  Sum_probs=218.8

Q ss_pred             cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734        442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER  521 (817)
Q Consensus       442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  521 (817)
                      .++..+++|..+.+++++++...+|+..+++..|.+.+                                   |+|+|+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------------------------~~~~s~~   47 (405)
T TIGR00891         3 YRHLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAG-----------------------------------EFGLTTV   47 (405)
T ss_pred             CCcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCChh
Confidence            34456788999999999999999999999999999988                                   9999999


Q ss_pred             hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc----------
Q psy11734        522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED----------  591 (817)
Q Consensus       522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~----------  591 (817)
                      +.+++.+.+.+++.+++++.|.++||+|||+++..+.++.+++++++++++  +++.+++.|+++|++.+          
T Consensus        48 ~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i  125 (405)
T TIGR00891        48 DAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAP--GYITMFIARLVIGIGMGGEYGSSAAYV  125 (405)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999  99999999999999987          


Q ss_pred             ---------------------------------------------------------------cCc-hh-----------
Q psy11734        592 ---------------------------------------------------------------LET-PW-----------  596 (817)
Q Consensus       592 ---------------------------------------------------------------~~~-~~-----------  596 (817)
                                                                                     ++. +.           
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (405)
T TIGR00891       126 IESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVR  205 (405)
T ss_pred             HHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhh
Confidence                                                                           000 00           


Q ss_pred             ---HHhhcCH-------------------h----HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH
Q psy11734        597 ---AAILSSL-------------------P----VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL  650 (817)
Q Consensus       597 ---~~~l~~~-------------------~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~  650 (817)
                         ++..+++                   +    +........+..........++|.|+++.+|++..+.+.+.+...+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~  285 (405)
T TIGR00891       206 TMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNI  285 (405)
T ss_pred             hHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHH
Confidence               0001100                   0    1222333344445555667889999999899999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccc
Q psy11734        651 IMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPID  730 (817)
Q Consensus       651 ~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (817)
                      ++++++++.|+++||++||+.+          ..+..+..+..........+.+.......+.+++.....+.......|
T Consensus       286 ~~~~g~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (405)
T TIGR00891       286 GAIVGGCVFGFLGDWLGRRKAY----------VCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGE  355 (405)
T ss_pred             HHHHHHHHHHHHHHHhCchhhh----------HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhh
Confidence            9999999999999999988753          233333322222222222233333333233334434444555666778


Q ss_pred             cCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHH
Q psy11734        731 LSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWI  776 (817)
Q Consensus       731 ~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~  776 (817)
                      ..| ++|++++|+.+...++++.++|.+.|.+.|+.|.  |+..+..
T Consensus       356 ~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~--~~~~~~~  400 (405)
T TIGR00891       356 YFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDE--YGTALAS  400 (405)
T ss_pred             hCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccc--cchhHHh
Confidence            777 7899999999999999999999999999998753  6555544

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.91  E-value=9.7e-23  Score=230.71  Aligned_cols=296  Identities=14%  Similarity=0.141  Sum_probs=232.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734        445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG  524 (817)
Q Consensus       445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g  524 (817)
                      ..+++|.++..+++....++.+++.++...|.+.+                                   ++|++.++.+
T Consensus        13 ~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~-----------------------------------~~g~s~~~~~   57 (455)
T TIGR00892        13 DGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQ-----------------------------------IFQATYSETA   57 (455)
T ss_pred             CCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHH-----------------------------------HhCcchhHHH
Confidence            34678999999999999888899889998888888                                   9999999999


Q ss_pred             HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHH-HHHHHhhhcc------------
Q psy11734        525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTV-LRFLEGVGED------------  591 (817)
Q Consensus       525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~-~R~l~Gig~~------------  591 (817)
                      ++.+.+.+++.++.++.|+++||+|||++++.+.++.+++++++++++  +++.+++ .|+++|++.+            
T Consensus        58 ~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~  135 (455)
T TIGR00892        58 WISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSS--NVIELYLTAGFITGLGLAFNFQPSLTMLGK  135 (455)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999  9998865 5799999887            


Q ss_pred             -----------------------------------------------------------c--Cc----------------
Q psy11734        592 -----------------------------------------------------------L--ET----------------  594 (817)
Q Consensus       592 -----------------------------------------------------------~--~~----------------  594 (817)
                                                                                 .  ..                
T Consensus       136 ~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (455)
T TIGR00892       136 YFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDG  215 (455)
T ss_pred             HHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCC
Confidence                                                                       0  00                


Q ss_pred             ---h---------h-----HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Q psy11734        595 ---P---------W-----AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSM  657 (817)
Q Consensus       595 ---~---------~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~  657 (817)
                         +         .     .+++++|.++......++....++....++|.|+++ .|++..+++...+..+++.+++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~  294 (455)
T TIGR00892       216 STKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARP  294 (455)
T ss_pred             ccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence               0         0     134667778877777777788888888999999987 699999999999999999999999


Q ss_pred             HHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-Cch
Q psy11734        658 SSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFS  736 (817)
Q Consensus       658 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  736 (817)
                      +.|+++||...++      .|+.....+....+++.++....+ +.+......++.+++.+...+...+...|..| +++
T Consensus       295 ~~g~l~d~~~~~~------~~~~~~~~~~~~~~l~~ll~~~~~-~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~  367 (455)
T TIGR00892       295 SCGLIAGLKWIRP------HVQYLFSFALLFNGLTHLLCALAG-DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRF  367 (455)
T ss_pred             HHHHHhcccccCH------HHHHHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHH
Confidence            9999999843211      022222233333333333333333 45555555555566656666666677777766 789


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHH
Q psy11734        737 GTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVF  787 (817)
Q Consensus       737 g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~  787 (817)
                      +++.|+.+...++|++++|.+.|.+.|..+  +|+..|++.+++.+++.+.
T Consensus       368 g~~~g~~~~~~~lg~~igp~i~G~l~~~~g--~~~~~f~~~~~~~li~~~~  416 (455)
T TIGR00892       368 SSAVGLVTIVECCAVLIGPPLAGRLVDATK--NYKYIFYASGSIVVSAGLF  416 (455)
T ss_pred             hhHHhHHHHHHHHHHHccccceeeeehhcC--CcchHHHHhhHHHHHHHHH
Confidence            999999999999999999999999999874  3778888877776666543

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.91  E-value=5.3e-22  Score=227.18  Aligned_cols=294  Identities=13%  Similarity=0.132  Sum_probs=208.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh----HHH
Q psy11734        450 YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT----QGV  525 (817)
Q Consensus       450 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~----~g~  525 (817)
                      +.++..++++++++.+|...++...|.+.+                                   +++.+.++    .+.
T Consensus        15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~-----------------------------------~~~~~~~~~~~~~~~   59 (490)
T PRK10642         15 RKAITAASLGNAMEWFDFGVYGFVAYALGK-----------------------------------VFFPGADPSVQMIAA   59 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------hhCCCCCcHHHHHHH
Confidence            567788899999999999999999998888                                   76543322    222


Q ss_pred             --HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHH--------HHHHHHHHhhhcc----
Q psy11734        526 --ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVS--------MTVLRFLEGVGED----  591 (817)
Q Consensus       526 --~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~--------l~~~R~l~Gig~~----  591 (817)
                        +.++..+++.+++++.|+++||+|||+++.+++++++++++++++++  |+++        ++++|+++|+|.|    
T Consensus        60 ~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~--~~~~~g~~a~~~l~~~R~l~G~g~g~~~~  137 (490)
T PRK10642         60 LATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIP--SYATIGIWAPILLLLCKMAQGFSVGGEYT  137 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhHhHhhHH
Confidence              25788899999999999999999999999999999999999999999  8864        8999999999998    


Q ss_pred             ---------------------------------------------------------------------------cCc--
Q psy11734        592 ---------------------------------------------------------------------------LET--  594 (817)
Q Consensus       592 ---------------------------------------------------------------------------~~~--  594 (817)
                                                                                                 ++.  
T Consensus       138 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~  217 (490)
T PRK10642        138 GASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPA  217 (490)
T ss_pred             HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChh
Confidence                                                                                       000  


Q ss_pred             ----------------------hhHHhhc-CHhHHH-HHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH
Q psy11734        595 ----------------------PWAAILS-SLPVWS-LIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL  650 (817)
Q Consensus       595 ----------------------~~~~~l~-~~~~~~-~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~  650 (817)
                                            +++++++ +++.+. .....++....++++..|+|+|+++.+|++..+.+.......+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~  297 (490)
T PRK10642        218 FQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMI  297 (490)
T ss_pred             HHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence                                  1112222 122222 2223345567888899999999998889998888888788889


Q ss_pred             HHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHH-HHHHHHHh-hcCchHHHHHHHHHHHHHHhhhhhhhhhhc
Q psy11734        651 IMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPG-VGALAASY-VGCNTSMVAICFTIGMAFMGFCYASIRVNP  728 (817)
Q Consensus       651 ~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (817)
                      +..++.++.|+++||+|||+.+          ..+.+... .+...+.. ...+.........+.+++.+...+......
T Consensus       298 ~~~~~~~~~g~l~dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  367 (490)
T PRK10642        298 GMLFVQPVMGLLSDRFGRRPFV----------ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTL  367 (490)
T ss_pred             HHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998643          23332222 12221221 122233333333333443344444455566


Q ss_pred             cccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734        729 IDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       729 ~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~  792 (817)
                      .+.+| +.|+++.|..+.....++.++|.+.+++.+..+  +|+..++...+..+++.+..++.+
T Consensus       368 ~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~--~~~~~~~~~~~~~~i~~~~~~~~p  430 (490)
T PRK10642        368 PAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ--NLMMPAYYLMVVAVIGLITGVTMK  430 (490)
T ss_pred             HHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHHHHHHhc
Confidence            67788 789999998777778888999999999988653  255555555556666655555553

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.91  E-value=1.6e-23  Score=234.22  Aligned_cols=288  Identities=16%  Similarity=0.178  Sum_probs=201.3

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-----cccCcchhHHHHhhhHHHH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-----FTASWANVFYIFGAIAVLW   75 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-----~~~gWr~~f~i~~~~~~i~   75 (817)
                      .|+++|++.|...|...+++.||+|+|||++++++++.+..+|..+++++++++.+     ...|||++|++.++++++.
T Consensus       102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~  181 (412)
T TIGR02332       102 LRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVIL  181 (412)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHH
Confidence            38999999999999999999999999999999999999999999999999998864     1369999999999888888


Q ss_pred             HhhhhheeccCCCCCCCCCHHHHhHhhhhccccccc-cccccccCccccchhhhhhhhchhhccccccccccccCCccch
Q psy11734         76 FAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERR-KDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTL  154 (817)
Q Consensus        76 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (817)
                      .++.++++||+|+++++.++++++...+..+..+.. ++++ +..+                                  
T Consensus       182 ~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------------------------------  226 (412)
T TIGR02332       182 GVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPE-GAFA----------------------------------  226 (412)
T ss_pred             HHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccc-cccc----------------------------------
Confidence            777888889988876666554443222211110000 0000 0000                                  


Q ss_pred             hHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHH-h
Q psy11734        155 GLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSE-V  233 (817)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~-~  233 (817)
                                                      ....+.+..+++++ +|.+|...+.+++.....+++.+|+|.|+++ .
T Consensus       227 --------------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~  273 (412)
T TIGR02332       227 --------------------------------HAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFN  273 (412)
T ss_pred             --------------------------------cccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence                                            00000112344444 6889999999999999999999999999988 3


Q ss_pred             hCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHH
Q psy11734        234 IGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIG  313 (817)
Q Consensus       234 ~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  313 (817)
                      .|++..+++.+..+..+++.++.+++|+++||+++|+.         ..........+++....... +.......+...
T Consensus       274 ~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  343 (412)
T TIGR02332       274 QGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH---------HTALPYLFAAAGWLLASATD-HNLIQLLGIIMA  343 (412)
T ss_pred             CCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH---------HHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHH
Confidence            47788899999999999999999999999999987763         12223333333332222222 222222222222


Q ss_pred             HHHhhhcccccccccccc-CCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        314 MAFMGFCYASIRVNPIDL-SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       314 ~~~~g~~~~~~~~~~~~~-~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      ..+.....+.......+. ++|+|++++|+.|..+++|++++|.+.|.+.|..|
T Consensus       344 ~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g  397 (412)
T TIGR02332       344 SMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG  397 (412)
T ss_pred             HHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence            222212222233444554 45899999999999999999999999999998865

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.91  E-value=2.2e-22  Score=226.73  Aligned_cols=279  Identities=15%  Similarity=0.123  Sum_probs=214.3

Q ss_pred             cccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCC
Q psy11734        440 YWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWD  519 (817)
Q Consensus       440 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  519 (817)
                      +|.+...++++..+..+.++++...+|+...+...|.+.+                                   |+|+|
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----------------------------------~~~~s   51 (426)
T PRK12307          7 PWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKA-----------------------------------DLGLT   51 (426)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-----------------------------------HhCCC
Confidence            4555556788888899999999999999999999988888                                   99999


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------
Q psy11734        520 ERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------  591 (817)
Q Consensus       520 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------  591 (817)
                      +.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++  +++.++++|+++|++.+        
T Consensus        52 ~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~  129 (426)
T PRK12307         52 DMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS--GVIMLTLSRFIVGMGMAGEYACAST  129 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999  99999999999999987        


Q ss_pred             ---------------------------------------------------------------cCc--------------
Q psy11734        592 ---------------------------------------------------------------LET--------------  594 (817)
Q Consensus       592 ---------------------------------------------------------------~~~--------------  594 (817)
                                                                                     ++.              
T Consensus       130 ~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  209 (426)
T PRK12307        130 YAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGKGKH  209 (426)
T ss_pred             HHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhccccc
Confidence                                                                           000              


Q ss_pred             ----------hhHHhhcCHhHHHHHHH---HHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy11734        595 ----------PWAAILSSLPVWSLIIS---EVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSA  661 (817)
Q Consensus       595 ----------~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~  661 (817)
                                ++++++++|.++.....   .++.....+.+..++|.|+++ .|.++.+.+...+...+++++++++.|+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~  288 (426)
T PRK12307        210 SQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGL  288 (426)
T ss_pred             cccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                      22345566665443332   223333445577889999988 5999999999989999999999999999


Q ss_pred             HHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHH-HHHhhhhhhhhhhccccCC-CchHHH
Q psy11734        662 LADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGM-AFMGFCYASIRVNPIDLSP-NFSGTI  739 (817)
Q Consensus       662 l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~g~~  739 (817)
                      +.||++||+.+          ..+.++..+..+.+.....+.........+.. +......+.......|..| +.||++
T Consensus       289 l~dr~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~  358 (426)
T PRK12307        289 CADRIGLKKTF----------SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLG  358 (426)
T ss_pred             HHHHhccHHHH----------HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhh
Confidence            99999987643          24444444443333332222222222212211 1111223344456678888 779999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhhcCCc
Q psy11734        740 MALSNGLGCVSGMVAPLTVGFLTQNKT  766 (817)
Q Consensus       740 ~g~~~~~~~~g~~i~p~~~g~~~~~~g  766 (817)
                      +|+.+....+++.++|.+.|++.|..+
T Consensus       359 ~g~~~~~~~~~~~~gp~~~g~l~~~~g  385 (426)
T PRK12307        359 TGLIYNLAATSGTFNSMAATWLGITMG  385 (426)
T ss_pred             hhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence            999999999999999999999999876

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.90  E-value=7.8e-22  Score=218.14  Aligned_cols=367  Identities=14%  Similarity=0.118  Sum_probs=246.6

Q ss_pred             HHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHH
Q psy11734        210 ISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLP  289 (817)
Q Consensus       210 i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~  289 (817)
                      +.+++...+.......+|.|+++.+|.|..+.|++.....+...+.+++.|+++||+|||+.         +...+....
T Consensus         4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~---------~~~~~~~~~   74 (375)
T TIGR00899         4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKG---------LILFCCLLA   74 (375)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchH---------HHHHHHHHH
Confidence            45666777777788889999988899999999999999999999999999999999999875         133444444


Q ss_pred             HHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHH--HHHHHhhhhhcccccccccceeccccc
Q psy11734        290 GVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTI--MALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a--~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      .++.....+.+ +.+.....-.+.+.+.+...+.......+..| +.|+.+  .+..+....+|..++|.+.+.+.+.. 
T Consensus        75 ~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-  152 (375)
T TIGR00899        75 ALACLLFAWNR-NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-  152 (375)
T ss_pred             HHHHHHHHhcc-hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-
Confidence            44444444433 43333322222222333334444444555444 455543  67777888899999999988876653 


Q ss_pred             ccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCC
Q psy11734        367 SINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESIL  446 (817)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (817)
                                                                  +|+..|++.+++.++..++..++.++.+++.+++  
T Consensus       153 --------------------------------------------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  186 (375)
T TIGR00899       153 --------------------------------------------GFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA--  186 (375)
T ss_pred             --------------------------------------------ccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc--
Confidence                                                        6999999998887776665544333322110000  


Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734        447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI  526 (817)
Q Consensus       447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~  526 (817)
                                                      +                                  ++.          
T Consensus       187 --------------------------------~----------------------------------~~~----------  190 (375)
T TIGR00899       187 --------------------------------L----------------------------------TRL----------  190 (375)
T ss_pred             --------------------------------c----------------------------------Ccc----------
Confidence                                            0                                  000          


Q ss_pred             HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHH
Q psy11734        527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVW  606 (817)
Q Consensus       527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~  606 (817)
                                                                                          +.++.+++|+++
T Consensus       191 --------------------------------------------------------------------~~~~~~~~~~~~  202 (375)
T TIGR00899       191 --------------------------------------------------------------------EVRGLLASRDTR  202 (375)
T ss_pred             --------------------------------------------------------------------hhhhhhcCcchH
Confidence                                                                                001122334444


Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHH
Q psy11734        607 SLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGA  686 (817)
Q Consensus       607 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~  686 (817)
                      ......++..........+.|.|+++++|.++.+.+...........++.+..|++.||+++|+.+          ..+.
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~  272 (375)
T TIGR00899       203 LLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM----------LLAA  272 (375)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH----------HHHH
Confidence            444444444444455567789999888999999999888887788888999999999999988653          2333


Q ss_pred             HHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCc
Q psy11734        687 VLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT  766 (817)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g  766 (817)
                      ....+....+...+ +.+.......+.+++.+...+......+|..|++++++.|+.+...++|..++|.+.|.+.|..+
T Consensus       273 ~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g  351 (375)
T TIGR00899       273 LAGVAFYTGLAADN-SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWS  351 (375)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            33333333333332 34444444445555555556666677788889888899999999999999999999999999865


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        767 LLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       767 ~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                         |+..|+..+++.+++.+...+.
T Consensus       352 ---~~~~~~~~~~~~~~~~~~~~~~  373 (375)
T TIGR00899       352 ---YHAVYWFAIVMLIVALFCLLLI  373 (375)
T ss_pred             ---chhHHHHHHHHHHHHHHHHhee
Confidence               7888888888888877766544

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.90  E-value=6.9e-22  Score=216.59  Aligned_cols=359  Identities=12%  Similarity=-0.002  Sum_probs=244.7

Q ss_pred             HHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH
Q psy11734        215 HDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL  294 (817)
Q Consensus       215 ~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~  294 (817)
                      +...+..+...+|.+.+| +|.|..+.|++.+...++..++++..|+++||+|||+.          ..........+..
T Consensus         3 ~~~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~----------~~~~~~~~~~~~~   71 (368)
T TIGR00903         3 SQAIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF----------LFGSLATFAAAAG   71 (368)
T ss_pred             hhHHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH----------HHHHHHHHHHHHH
Confidence            455667777778877766 79999999999999999999999999999999997764          3333333333322


Q ss_pred             hhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCC
Q psy11734        295 AASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLS  374 (817)
Q Consensus       295 ~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~  374 (817)
                      .. ...++.......-.+.+.+.+...+......+..++|+|++++++.+....+|..+++.+.+.+.++.         
T Consensus        72 ~~-~~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~---------  141 (368)
T TIGR00903        72 RL-LDPFNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG---------  141 (368)
T ss_pred             HH-HHhccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------
Confidence            22 22235555555555555555443333333344466689999999999999999999998888776543         


Q ss_pred             CCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHH
Q psy11734        375 PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGI  454 (817)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~  454 (817)
                                                          +||..|++.+++.++..++..++-|+.++. . +  +       
T Consensus       142 ------------------------------------gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~-~-~--~-------  174 (368)
T TIGR00903       142 ------------------------------------GLQLLIIPIAAVAAAGIILVLAALPALPFQ-A-A--E-------  174 (368)
T ss_pred             ------------------------------------chHHHHHHHHHHHHHHHHHHHHHcCCCCCC-C-C--C-------
Confidence                                                699999998887776655544433332210 0 0  0       


Q ss_pred             HHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHH
Q psy11734        455 MGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGY  534 (817)
Q Consensus       455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~  534 (817)
                                                                                  +.  +.              
T Consensus       175 ------------------------------------------------------------~~--~~--------------  178 (368)
T TIGR00903       175 ------------------------------------------------------------GF--GF--------------  178 (368)
T ss_pred             ------------------------------------------------------------Cc--ch--------------
Confidence                                                                        00  00              


Q ss_pred             HHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHH
Q psy11734        535 ILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVG  614 (817)
Q Consensus       535 ~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~  614 (817)
                                      ++                 . .                     +++++++|+|.+|.+.+..++
T Consensus       179 ----------------~~-----------------~-~---------------------~~~~~ll~~~~~~~~~~~~~~  203 (368)
T TIGR00903       179 ----------------KD-----------------A-V---------------------KEFGALAGRKDLWIIGAILGF  203 (368)
T ss_pred             ----------------HH-----------------H-H---------------------HHHHHHHcChhHHHHHHHHHH
Confidence                            00                 0 0                     124567889999999999999


Q ss_pred             HHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHH
Q psy11734        615 HDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGAL  694 (817)
Q Consensus       615 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~  694 (817)
                      ....++++.+|+|+|+++ .|++.. .+....+..+.+.++   .++++||..||+.      |+........+.++.+.
T Consensus       204 ~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~------r~~~~~~~~~~~a~~~~  272 (368)
T TIGR00903       204 GVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGL------RSIYIRAAALLIAAFFL  272 (368)
T ss_pred             HHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhh------HHHHHHHHHHHHHHHHH
Confidence            999999999999999977 688865 666666666655555   5889999877532      23323323333344444


Q ss_pred             HHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHH
Q psy11734        695 AASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVV  773 (817)
Q Consensus       695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~  773 (817)
                      .+.... +....+....+.+++....++..+...+|.+| +.||++.|+.+..+++++..+|.+.+.+..  +   .+..
T Consensus       273 ~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~---~~~~  346 (368)
T TIGR00903       273 ALAFEL-NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S---AEAY  346 (368)
T ss_pred             HHHHcc-ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C---HHHH
Confidence            444333 34444444455555555566667788899999 689999999999999999999999998874  2   5677


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy11734        774 FWIMFLTLFISNVFFV  789 (817)
Q Consensus       774 ~~~~~~~~~i~~~~~~  789 (817)
                      |...+...+++.+...
T Consensus       347 f~~~~~~~~i~~~~~~  362 (368)
T TIGR00903       347 FTFLAILITIAFAIAL  362 (368)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            7777777777776654

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK09952 shikimate transporter; Provisional

Probab=99.90  E-value=7.3e-22  Score=222.67  Aligned_cols=298  Identities=16%  Similarity=0.123  Sum_probs=216.9

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhhhhccEEEEee-ecccccccccCCCCCCCCCCCCCCceeeecccccccccc--cCChh
Q psy11734        445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEM-VRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKF--DWDER  521 (817)
Q Consensus       445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~  521 (817)
                      ..++++.+....+++++++++|+..++...|.. .+                                   ++  +.++.
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~   60 (438)
T PRK09952         16 SLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNR-----------------------------------EFFPQVSPA   60 (438)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------hcCCCCCcH
Confidence            456677888899999999999999999877653 33                                   33  45554


Q ss_pred             hHHHHH-----HHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchH--------HHHHHHHHHhh
Q psy11734        522 TQGVIL-----SAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPV--------SMTVLRFLEGV  588 (817)
Q Consensus       522 ~~g~~~-----s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~--------~l~~~R~l~Gi  588 (817)
                       .+++.     ++..++..+++++.|+++||+|||+++..++++++++++++++++  +++        .++++|+++|+
T Consensus        61 -~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~  137 (438)
T PRK09952         61 -MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLP--SFSTIGWWAPVLLVTLRAIQGF  137 (438)
T ss_pred             -HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHh
Confidence             35443     345566779999999999999999999999999999999999999  876        58999999999


Q ss_pred             hcc-----------------------------------------------------------------------------
Q psy11734        589 GED-----------------------------------------------------------------------------  591 (817)
Q Consensus       589 g~~-----------------------------------------------------------------------------  591 (817)
                      +.|                                                                             
T Consensus       138 ~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~  217 (438)
T PRK09952        138 AVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRN  217 (438)
T ss_pred             hhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHH
Confidence            998                                                                             


Q ss_pred             --cCc-----------------hh-HHhhcCHhHHHHHH-HHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH
Q psy11734        592 --LET-----------------PW-AAILSSLPVWSLII-SEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL  650 (817)
Q Consensus       592 --~~~-----------------~~-~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~  650 (817)
                        ++.                 +. +.++++|+.|.... ..++.....+....|.|.|+++.+|++...........++
T Consensus       218 ~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~  297 (438)
T PRK09952        218 GMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGG  297 (438)
T ss_pred             hCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence              000                 01 11345555555543 4556667888889999999999899998776666666778


Q ss_pred             HHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHh--hcCc-hHHHHHHHHHHHHHHhhhhhhhhhh
Q psy11734        651 IMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASY--VGCN-TSMVAICFTIGMAFMGFCYASIRVN  727 (817)
Q Consensus       651 ~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  727 (817)
                      .+.++.++.|+++||+|||+.+          ..+.++..++.+.+..  ...+ .+.......+.+++.+...+..+..
T Consensus       298 ~~~i~~~~~g~l~Dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  367 (438)
T PRK09952        298 LSCLTIPCFAWLADRFGRRRVY----------ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPM  367 (438)
T ss_pred             HHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8889999999999999988653          2333333332222211  1212 2232333344445555556667788


Q ss_pred             ccccCC-CchHHHHHHHHHHHH-HHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        728 PIDLSP-NFSGTIMALSNGLGC-VSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       728 ~~~~~~-~~~g~~~g~~~~~~~-~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      ..|.+| +.|+++.|+.+..+. +++.++|.+.+++.|..+ ++|...+...+++.+++.+..+..
T Consensus       368 ~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~-~~~~~~~~~~~~~~~i~~v~~~~~  432 (438)
T PRK09952        368 FTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG-GSWHSVAIYLLAGCLISAMTALLM  432 (438)
T ss_pred             HHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHc
Confidence            889888 789999999776655 799999999999998653 347788888888888877776655

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.90  E-value=5.7e-22  Score=231.36  Aligned_cols=296  Identities=14%  Similarity=0.146  Sum_probs=234.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734        445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG  524 (817)
Q Consensus       445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g  524 (817)
                      ..+++|.++++++++++...+|...++..+|.+.+                                   +++++..+.+
T Consensus       161 ~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~-----------------------------------~~gls~~~~g  205 (742)
T TIGR01299       161 HGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEK-----------------------------------DLCIPDSGKG  205 (742)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCCHHHHH
Confidence            35788999999999999999999999999998888                                   9999999999


Q ss_pred             HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-------------
Q psy11734        525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-------------  591 (817)
Q Consensus       525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-------------  591 (817)
                      ++.+++.++++++++++|+++||+|||+++++++++++++++++++++  +++.++++|+++|++.+             
T Consensus       206 ~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~  283 (742)
T TIGR01299       206 MLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEF  283 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999  99999999999999988             


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       284 ~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~  363 (742)
T TIGR01299       284 LAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLE  363 (742)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence                                                                                            


Q ss_pred             -----------------c-C---ch----------------------------------------------hHHhhc---
Q psy11734        592 -----------------L-E---TP----------------------------------------------WAAILS---  601 (817)
Q Consensus       592 -----------------~-~---~~----------------------------------------------~~~~l~---  601 (817)
                                       . +   .+                                              ++++++   
T Consensus       364 ~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~  443 (742)
T TIGR01299       364 NGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEV  443 (742)
T ss_pred             CCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccH
Confidence                             0 0   00                                              000111   


Q ss_pred             CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH----h-----------------CCCh----------------------
Q psy11734        602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQV----I-----------------GLSV----------------------  638 (817)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~-----------------g~s~----------------------  638 (817)
                      .++.+.+++.+++..+++|++..|+|.++++.    +                 +++.                      
T Consensus       444 ~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (742)
T TIGR01299       444 REITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKS  523 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccc
Confidence            12346777888999999999999999886541    0                 0000                      


Q ss_pred             -----------------------------------------------------------------------hHHHHHHHH
Q psy11734        639 -----------------------------------------------------------------------AENGVLSAL  647 (817)
Q Consensus       639 -----------------------------------------------------------------------~~~~~~~~~  647 (817)
                                                                                             ........+
T Consensus       524 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l  603 (742)
T TIGR01299       524 VSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFL  603 (742)
T ss_pred             cccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHH
Confidence                                                                                   012233556


Q ss_pred             HHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhh
Q psy11734        648 PFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVN  727 (817)
Q Consensus       648 ~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (817)
                      ..++.++|.++.|+++||+|||+++          ..++++.+++++++.+.. +....+++.++.+++.+...+....+
T Consensus       604 ~~l~~i~G~il~g~L~Dr~GRr~~l----------~~~~~lsai~~ll~~~~~-s~~~ll~~~~l~g~~~~~~~~~~~a~  672 (742)
T TIGR01299       604 GTLAVLPGNIVSALLMDKIGRLRML----------AGSMVLSCISCFFLSFGN-SESAMIALLCLFGGLSIAAWNALDVL  672 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999988654          477777777777766654 34444444445555555566777788


Q ss_pred             ccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734        728 PIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       728 ~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~  792 (817)
                      +.|.+| +.|++++|+.+..+.+|++++|.+.+.+.+..    ...+|++.+++.++++++.++++
T Consensus       673 ~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~----~~~pf~i~a~~lll~~ll~~~LP  734 (742)
T TIGR01299       673 TVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT----KAAPILFASAALACGGLLALKLP  734 (742)
T ss_pred             HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999 78999999999999999999999999887753    45678788888777777766653

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.90  E-value=1.1e-21  Score=219.38  Aligned_cols=274  Identities=15%  Similarity=0.075  Sum_probs=220.6

Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                      +++++.+...+.+..+...++...+.+..|.+.+                                   |+|+|+.+.++
T Consensus         8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~s~~~~~~   52 (406)
T PRK15402          8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVE-----------------------------------DFNAGAEWVPT   52 (406)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHH-----------------------------------HhCCCHHHHHH
Confidence            4567777888888888999999999998888888                                   99999999999


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------------
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------------  591 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------------  591 (817)
                      ..+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++++++  +++.+++.|+++|++.+              
T Consensus        53 ~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~  130 (406)
T PRK15402         53 SMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ--SIEQFTLLRFLQGIGLCFIGAVGYAAIQESF  130 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999  99999999999999877              


Q ss_pred             ----------------------------------------------------------c--------C-------chhHH
Q psy11734        592 ----------------------------------------------------------L--------E-------TPWAA  598 (817)
Q Consensus       592 ----------------------------------------------------------~--------~-------~~~~~  598 (817)
                                                                                +        +       +++++
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (406)
T PRK15402        131 EEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKL  210 (406)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHH
Confidence                                                                      0        0       01245


Q ss_pred             hhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734        599 ILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR  678 (817)
Q Consensus       599 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r  678 (817)
                      ++++|+++...+..++.....+....+.|.|+++.+|.++.+.+.......++.+++.++.|+++||+++|+.+      
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~------  284 (406)
T PRK15402        211 VLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLI------  284 (406)
T ss_pred             HHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH------
Confidence            67888888888877777777777778899999988999999999888878888999999999999999987643      


Q ss_pred             HHHHHHHHHHHHHHHHHHHhh----cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHH
Q psy11734        679 KVFATLGAVLPGVGALAASYV----GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVA  754 (817)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~  754 (817)
                          ..+..+..++.+++...    ..+.++......+.+.+.+...+..........++++|++.+..+..+.++..++
T Consensus       285 ----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g  360 (406)
T PRK15402        285 ----RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVG  360 (406)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHH
Confidence                34444444444444332    1123334444444555555545555444444556889999999999999999999


Q ss_pred             HHHHHHhhcCCc
Q psy11734        755 PLTVGFLTQNKT  766 (817)
Q Consensus       755 p~~~g~~~~~~g  766 (817)
                      +.+.+.+.+..+
T Consensus       361 ~~~~~~l~~~~~  372 (406)
T PRK15402        361 IELSKHAYLGGG  372 (406)
T ss_pred             HHHHHhcccCCc
Confidence            999999988875

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.90  E-value=1.2e-23  Score=240.83  Aligned_cols=310  Identities=11%  Similarity=0.016  Sum_probs=215.0

Q ss_pred             CcccccCCcccccchhhhhhhhcc-CCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWS-PPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~-p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~   79 (817)
                      .|++||+|.+...|....++.+++ |+|||++++|++.....+|..+||.+++++.+ +.||||+|+++.++.++..++.
T Consensus       100 ~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-~~gwr~~f~i~~~~~~~~~~l~  178 (495)
T PRK14995        100 TRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-HFYWGSVFLINVPIVLVVMGLT  178 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChHHHHHHHHHHHHHHHHHH
Confidence            489999999999999998888877 67999999999999999999999999999999 9999999999999988888888


Q ss_pred             hheeccCCCCCC-CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHH
Q psy11734         80 CILCFNDPKSHP-YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGF  158 (817)
Q Consensus        80 ~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (817)
                      ++++|++|++++ ..+..+.......                        ...+-+.+....    .++.....+....+
T Consensus       179 ~~~l~~~~~~~~~~~d~~g~~~~~~~------------------------~~~l~~~~~~~~----~~~~~~~~~~~~~~  230 (495)
T PRK14995        179 ARYVPRQAGRRDQPLNLGHALMLIVA------------------------ILLLVYSAKTAL----KGFLSLWVTSLTLL  230 (495)
T ss_pred             HHhCCCCCCCCCCCCChHhHHHHHHH------------------------HHHHHHHHHhcc----ccCCchHHHHHHHH
Confidence            787776543221 1111110000000                        000000000000    00111111222211


Q ss_pred             HHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcc
Q psy11734        159 LSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSV  238 (817)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~  238 (817)
                      .....+..+                ..++...+.+.-..+++|||.+....+..++....+++...+.|.|+|+++|+|+
T Consensus       231 ~~~~~l~~f----------------~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~  294 (495)
T PRK14995        231 TGALLLGLF----------------IRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSP  294 (495)
T ss_pred             HHHHHHHHH----------------HHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence            121111111                1111122222223689999999999999999999999999999999999999999


Q ss_pred             cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC--CChhHHHHHHHHHHHH
Q psy11734        239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG--CNTSMVAIFFTIGMAF  316 (817)
Q Consensus       239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~  316 (817)
                      .++|+...+..++..+++++.|++.||+++|+.          +..+..+..++...+....  ++.+.......+.+.+
T Consensus       295 ~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~----------~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g  364 (495)
T PRK14995        295 LEAGMFMLPVMVASGFSGPIAGILVSRLGLRLV----------ATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFS  364 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH----------HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Confidence            999999999999999999999999999998774          5666666666555443322  2333344445555555


Q ss_pred             hhhccccccc-cccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        317 MGFCYASIRV-NPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       317 ~g~~~~~~~~-~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      .+...+.... ...+.++++++.+.++.++.+++|+++|+.+.|.+.++.
T Consensus       365 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~~  414 (495)
T PRK14995        365 AASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSRS  414 (495)
T ss_pred             HHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555554444 444456689999999999999999999999999998763

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.90  E-value=1.2e-21  Score=217.17  Aligned_cols=290  Identities=15%  Similarity=0.102  Sum_probs=216.2

Q ss_pred             HHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHH
Q psy11734        452 LGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFY  531 (817)
Q Consensus       452 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~  531 (817)
                      .+....+..+.....+....+.+|.+.+                                   |+|.|.++.|++.+.+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------------------------~~g~s~~~~g~~~s~~~   48 (382)
T PRK10091          4 VILSLALGTFGLGMAEFGIMGVLTELAH-----------------------------------DVGISIPAAGHMISYYA   48 (382)
T ss_pred             hHHHHHHHHHHHHhhHHHHHhChHHHHH-----------------------------------HcCCCHHHHhHHHHHHH
Confidence            3455566777777788888888888888                                   99999999999999999


Q ss_pred             HHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------------------
Q psy11734        532 YGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------------------  591 (817)
Q Consensus       532 ~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------------------  591 (817)
                      +++.+++++.|++.||+|||+++.++.++.+++.+++++++  +++.+++.|+++|++.+                    
T Consensus        49 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~  126 (382)
T PRK10091         49 LGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS--SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVT  126 (382)
T ss_pred             HHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhh
Confidence            99999999999999999999999999999999999999999  99999999999999877                    


Q ss_pred             ----------------------------------------------------cC------ch---hHHhhcCHhHHHHHH
Q psy11734        592 ----------------------------------------------------LE------TP---WAAILSSLPVWSLII  610 (817)
Q Consensus       592 ----------------------------------------------------~~------~~---~~~~l~~~~~~~~~~  610 (817)
                                                                          ++      .+   ..+.+|+++.|....
T Consensus       127 ~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (382)
T PRK10091        127 AAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKGGLREQFHFLRSPAPWLIFA  206 (382)
T ss_pred             HHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcccccCHHHHHHHhcChHHHHHHH
Confidence                                                                00      00   124566777777666


Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHH
Q psy11734        611 SEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPG  690 (817)
Q Consensus       611 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~  690 (817)
                      ..++.....+....+.+.|+++..|+++.+.+.+.....++.++++++.|++.||+++|+.+          ..+..+.+
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~----------~~~~~~~~  276 (382)
T PRK10091        207 ATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIA----------AVTDFIIV  276 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHH----------HHHHHHHH
Confidence            66665566666677888899888899999999999999999999999999999999987653          34555555


Q ss_pred             HHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhh-hhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccc
Q psy11734        691 VGALAASYVGCNTSMVAICFTIGMAFMGFCYASIR-VNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLL  768 (817)
Q Consensus       691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~  768 (817)
                      ++.+++....++.+.......+.+.+.....++.. ....+..+ +.++.+  ..+...++|+.++|.+.|.+.|..+  
T Consensus       277 i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~--  352 (382)
T PRK10091        277 LALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGL--  352 (382)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHccc--
Confidence            55544433322333333333333332222222222 23333333 445544  3467788999999999999999753  


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734        769 EWRVVFWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       769 ~~~~~~~~~~~~~~i~~~~~~~~~  792 (817)
                      +|+..+...+++..+.........
T Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~  376 (382)
T PRK10091        353 AYNYVALPAALLSFAAMSSLLLYG  376 (382)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHh
Confidence            388888888777776665555553

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.90  E-value=1.2e-21  Score=217.22  Aligned_cols=283  Identities=17%  Similarity=0.099  Sum_probs=218.3

Q ss_pred             HHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHH
Q psy11734        453 GIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYY  532 (817)
Q Consensus       453 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~  532 (817)
                      +...+++.++...+...+.+..|.+.+                                   |+|.|+.+.|++.+.+.+
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~-----------------------------------~~~~s~~~~G~~~s~~~l   52 (381)
T PRK03633          8 VLLLLCGLLLLTLAIAVLNTLVPLWLA-----------------------------------QEHLPTWQVGVVSSSYFT   52 (381)
T ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHHHH-----------------------------------HcCCCHHHHHHHHHHHHH
Confidence            556667777888888999999999888                                   999999999999999999


Q ss_pred             HHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------------------
Q psy11734        533 GYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---------------------  591 (817)
Q Consensus       533 ~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---------------------  591 (817)
                      ++.+++++.|+++||+|||+++..+.++.+++.+++++++  |++.+++.|+++|++.+                     
T Consensus        53 ~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~  130 (381)
T PRK03633         53 GNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMV--GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGR  130 (381)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            9999999999999999999999999999999999999999  99999999999999987                     


Q ss_pred             ---------------------------------------------------c-------CchhHHhhcCHhHHHHHHHHH
Q psy11734        592 ---------------------------------------------------L-------ETPWAAILSSLPVWSLIISEV  613 (817)
Q Consensus       592 ---------------------------------------------------~-------~~~~~~~l~~~~~~~~~~~~~  613 (817)
                                                                         +       ..+.++.+|+|.++......+
T Consensus       131 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (381)
T PRK03633        131 LLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAAILPLLFTRILNQQAENHDSTSIWPMLKLRQARLGVNGCI  210 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCHHHHHHhcchHHHHHHHH
Confidence                                                               0       112345667777666554444


Q ss_pred             HHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHH
Q psy11734        614 GHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGA  693 (817)
Q Consensus       614 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~  693 (817)
                      .....+....+++|.|+++ .|.+..+++.+.+...++.+++++..|++.||+++|+.+          ..+.....++.
T Consensus       211 ~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l----------~~~~~~~~~~~  279 (381)
T PRK03633        211 ISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVL----------RVQVFVVILGS  279 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHH----------HHHHHHHHHHH
Confidence            4444556667789999987 699999999999999999999999999999999987643          23444444433


Q ss_pred             HHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHH
Q psy11734        694 LAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRV  772 (817)
Q Consensus       694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~  772 (817)
                      +.+.  . .. .......+.+.......+.......|..| ++++...+..+...++|+.++|.+.|++.|+.+   ++.
T Consensus       280 ~~~~--~-~~-~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g---~~~  352 (381)
T PRK03633        280 IAML--S-QA-AMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS---DNL  352 (381)
T ss_pred             HHHh--h-hH-HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---ccH
Confidence            3332  1 11 11122222333333445666666667666 567888888888889999999999999999875   678


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q psy11734        773 VFWIMFLTLFISNVFFVL  790 (817)
Q Consensus       773 ~~~~~~~~~~i~~~~~~~  790 (817)
                      .|.+.+.+.++.....++
T Consensus       353 ~f~~~~~~~l~~~~~~~~  370 (381)
T PRK03633        353 LFIMIASVSFIYLLMLLR  370 (381)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            888877777766544443

>PRK15075 citrate-proton symporter; Provisional

Probab=99.89  E-value=2.3e-21  Score=218.71  Aligned_cols=275  Identities=17%  Similarity=0.121  Sum_probs=197.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734        445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG  524 (817)
Q Consensus       445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g  524 (817)
                      .++.|++....+++++++.++|+..++++.|.+.+                                   |++.++.+.+
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~-----------------------------------~~~~~~~~~~   53 (434)
T PRK15075          9 SRESKARAILRVTSGNFLEMFDFFLFGFYATAIAK-----------------------------------TFFPAGNEFA   53 (434)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCCCCchH
Confidence            34566778999999999999999999999999999                                   9999887765


Q ss_pred             HHH-HHH--HHHH---HHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchH--------HHHHHHHHHhhhc
Q psy11734        525 VIL-SAF--YYGY---ILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPV--------SMTVLRFLEGVGE  590 (817)
Q Consensus       525 ~~~-s~~--~~~~---~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~--------~l~~~R~l~Gig~  590 (817)
                      .+. +..  ..++   .+++++.|+++||+|||+++..++++++++++++++++  +++        .++++|+++|++.
T Consensus        54 ~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~  131 (434)
T PRK15075         54 SLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVP--GYATIGLAAPLLVLLGRLLQGFSA  131 (434)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHhhccc
Confidence            443 322  2222   47899999999999999999999999999999999999  876        4789999999998


Q ss_pred             c-------------------------------------------------------------------------------
Q psy11734        591 D-------------------------------------------------------------------------------  591 (817)
Q Consensus       591 ~-------------------------------------------------------------------------------  591 (817)
                      +                                                                               
T Consensus       132 g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~  211 (434)
T PRK15075        132 GVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSL  211 (434)
T ss_pred             cccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhc
Confidence            7                                                                               


Q ss_pred             cCc-h-------------hHHhhcCHhHHHH-HHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHH
Q psy11734        592 LET-P-------------WAAILSSLPVWSL-IISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVS  656 (817)
Q Consensus       592 ~~~-~-------------~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~  656 (817)
                      ++. +             +++..++++.+.. ....++....++....|.|.|+++++|++..+.+....+..+++++++
T Consensus       212 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  291 (434)
T PRK15075        212 EETEEFLARKHRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWL  291 (434)
T ss_pred             CCCHHHHHhhhccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            000 0             0111223333333 233344556677888999999999899999999988888999999999


Q ss_pred             HHHHHHHhhhhcccccccchhhHHHHHHHHHHHHH-HHHHHH-h-hcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC
Q psy11734        657 MSSSALADYLIVRDILSRTNVRKVFATLGAVLPGV-GALAAS-Y-VGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP  733 (817)
Q Consensus       657 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (817)
                      +++|+++||++||+..          ..+..+..+ ....+. . ...+.........+.+++.+...+..+....|..|
T Consensus       292 ~~~g~l~Dr~g~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p  361 (434)
T PRK15075        292 PIGGALSDRIGRRPVL----------IAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMP  361 (434)
T ss_pred             HHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCC
Confidence            9999999999987642          122222211 111111 1 11122222222233334444444555566778887


Q ss_pred             -CchHHHHHHHHHHHHH-HHhHHHHHHHHhhcCCc
Q psy11734        734 -NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNKT  766 (817)
Q Consensus       734 -~~~g~~~g~~~~~~~~-g~~i~p~~~g~~~~~~g  766 (817)
                       +.|+++.|+.+..+.. ++.++|.+.|.+.|+.|
T Consensus       362 ~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g  396 (434)
T PRK15075        362 AEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG  396 (434)
T ss_pred             CCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence             7899999997666664 68899999999999876

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.89  E-value=1.7e-22  Score=224.46  Aligned_cols=283  Identities=23%  Similarity=0.399  Sum_probs=205.6

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...|...+++.|++|+|||++++++......+|..+++.+++.+.+ ..+||+.|++.+.+.++..++.+
T Consensus        88 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~  166 (399)
T TIGR00893        88 LRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI-HFSWQWAFIIEGVLGIIWGVLWL  166 (399)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-hCCchHHHHHHHHHHHHHHHHhh
Confidence            37899999999999999999999999999999999999999999999999999998 89999999999988888877777


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +..||+|+++++.++++++...++... +. +++                                              
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~----------------------------------------------  198 (399)
T TIGR00893       167 KFIPDPPQKAKWLTEEEKYIVVGGLLA-EQ-QGK----------------------------------------------  198 (399)
T ss_pred             heecCCCCccccCCHHHHhhcchhhcc-cc-ccc----------------------------------------------
Confidence            777777655444333322211111000 00 000                                              


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                ..++..+...++++|+|+++...+..++.....+....+.|.|+++.+|.+..+
T Consensus       199 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (399)
T TIGR00893       199 --------------------------GPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE  252 (399)
T ss_pred             --------------------------cccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH
Confidence                                      001112345678899999999999999999999999999999999989999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHH--HHHHhhhcc-CCChhHHHHHHHHHHHHh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPG--VGALAASYV-GCNTSMVAIFFTIGMAFM  317 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~l~~~~~  317 (817)
                      ++.+.....+++.+++++.|+++||+++|+..      ............  ......... .++.........++.+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (399)
T TIGR00893       253 AGFMASLPGIVGFIGMILGGRLSDLLLRRGKS------LVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGL  326 (399)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc------hhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhch
Confidence            99999999999999999999999999998620      000111111111  111111111 112333333333333333


Q ss_pred             hhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        318 GFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       318 g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      + ..+.......|..| ++|+++.|+.+...++|+.++|.+.|.+.|..
T Consensus       327 ~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~  374 (399)
T TIGR00893       327 G-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT  374 (399)
T ss_pred             h-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence            3 44555666666555 79999999999999999999999999998875

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.89  E-value=7.3e-23  Score=230.73  Aligned_cols=309  Identities=18%  Similarity=0.162  Sum_probs=209.0

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|++.|..++...+++.|++|+|||++++++++.+..+|..+++.+.+++.+ ..|||+.|++.+++.++..++.++
T Consensus       118 ~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~-~~gw~~~f~~~~i~~~~~~~~~~~  196 (434)
T PRK11663        118 WVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL-HYGWRYGMMIAGIIAIVVGLFLCW  196 (434)
T ss_pred             HHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHHH
Confidence            7788999999999999999999999999999999999999999999999999999 899999999998877776666666


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      .+||+|++.+..+.++.++  +..+..+..++++.++                                           
T Consensus       197 ~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-------------------------------------------  231 (434)
T PRK11663        197 RLRDKPQAMGLPSVGEWRH--DALELAQQQEGAGLSR-------------------------------------------  231 (434)
T ss_pred             HcCCCHhhcCCCCcccccc--cccccchhccccCCCh-------------------------------------------
Confidence            6677654322111100000  0000000000000000                                           


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchH-HHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPW-AAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                     +..+ ...+|+|.++...+..++.....+++..|+|.|+++.+|+|..+
T Consensus       232 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  280 (434)
T PRK11663        232 -------------------------------KEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT  280 (434)
T ss_pred             -------------------------------hhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH
Confidence                                           0111 23678899999888888888888888899999998878999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      ++.......+++.++++++|+++||+.+++..    ........+.....+.+..+  ...+...........+++....
T Consensus       281 a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~  354 (434)
T PRK11663        281 ANSAVSMFELGGFIGALVAGWGSDKLFNGNRG----PMNLIFAAGILLSVGSLWLM--PFASYVMQAACFFTIGFFVFGP  354 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHhccCCcc----HHHHHHHHHHHHHHHHHHHc--ccccHHHHHHHHHHHHHHHhhH
Confidence            99999999999999999999999998433210    00111122222222222222  1112222222222111111111


Q ss_pred             cccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734        321 YASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  399 (817)
Q Consensus       321 ~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (817)
                      .........|..| +++|+++|+.++..++|++++|.+.|.+.|..                                  
T Consensus       355 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~----------------------------------  400 (434)
T PRK11663        355 QMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW----------------------------------  400 (434)
T ss_pred             HHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc----------------------------------
Confidence            1112334456554 79999999999999999999999999998865                                  


Q ss_pred             ccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                                 +|+..|++.+++.+++.+..+...|+++
T Consensus       401 -----------g~~~~f~~~~~~~~~~~~~~~~~~~~~~  428 (434)
T PRK11663        401 -----------HWTGFFVVISIAAGISALLLLPFLNAQA  428 (434)
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence                       5889999998888877766655444433

>PRK03545 putative arabinose transporter; Provisional

Probab=99.89  E-value=6.9e-23  Score=227.86  Aligned_cols=281  Identities=15%  Similarity=0.069  Sum_probs=216.5

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+..+|...+++.|++|+|||++++|++..+.++|..++|++++.+.+ ..|||++|++.+++.++..+..+
T Consensus       103 ~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~-~~gw~~~f~~~~~~~~l~~~~~~  181 (390)
T PRK03545        103 SRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ-YLGWRTTFLAIGGGALITLLLLI  181 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH-HhcHHHHHHHHHHHHHHHHHHHH
Confidence            38899999998999999999999999999999999999999999999999999999 89999999999988877766666


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +..|++|++++   + +                                                               
T Consensus       182 ~~~~~~~~~~~---~-~---------------------------------------------------------------  194 (390)
T PRK03545        182 KLLPLLPSEHS---G-S---------------------------------------------------------------  194 (390)
T ss_pred             HhCCCCCCCCc---c-h---------------------------------------------------------------
Confidence            65554332110   0 0                                                               


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                      ..+.++++|||.++......++.....+....+.|.++++.+|+|..+
T Consensus       195 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~  242 (390)
T PRK03545        195 --------------------------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENF  242 (390)
T ss_pred             --------------------------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccH
Confidence                                            012456789999887777777777777777788999998888999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      ++.+..+..+++++++++.|+++||.++|+           ...+..+...+...+....++.........+.+.+....
T Consensus       243 ~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~  311 (390)
T PRK03545        243 ATLLLLLFGGAGIIGSVLFSRLGNRHPSGF-----------LLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCI  311 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccchhH-----------HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999998764           333333333333333222334333333333333333333


Q ss_pred             cccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccc
Q psy11734        321 YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTV  400 (817)
Q Consensus       321 ~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (817)
                      .+.......+..|+++++++|+.+...++|.++||.+.|.+.|+.                                   
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-----------------------------------  356 (390)
T PRK03545        312 GLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHL-----------------------------------  356 (390)
T ss_pred             hHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------------------------
Confidence            344456666778889999999999999999999999999999886                                   


Q ss_pred             cccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734        401 GFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE  437 (817)
Q Consensus       401 ~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~  437 (817)
                                +++..|++.+++.+++++......|++
T Consensus       357 ----------g~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (390)
T PRK03545        357 ----------GLSSIGYVGAALALAALVWSILIFRRF  383 (390)
T ss_pred             ----------ChhHHHHHHHHHHHHHHHHHHHHcccc
Confidence                      589999999999998888776666543

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.89  E-value=1.3e-20  Score=216.22  Aligned_cols=398  Identities=16%  Similarity=0.128  Sum_probs=265.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHH
Q psy11734        206 WSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLG  285 (817)
Q Consensus       206 ~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~  285 (817)
                      ..+.+..++............|.+.++ +|.|..+.++......++..++.++.|+++||+|||+.          ...+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------~~~~   73 (485)
T TIGR00711         5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRL----------FLIS   73 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHH----------HHHH
Confidence            344455555556666666778877766 79999999999999999999999999999999999986          6677


Q ss_pred             hHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734        286 AVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  364 (817)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~  364 (817)
                      ..+..++.......+ +.........+.+.+.+...+.......|..| ++|+++.++.+....+|..++|.+.+.+.++
T Consensus        74 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~  152 (485)
T TIGR00711        74 TFAFTLGSLLCGVAP-NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN  152 (485)
T ss_pred             HHHHHHHHHHHhCcC-CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence            777777666665554 55555555555566666666666677777665 8999999999999999999999999888765


Q ss_pred             ccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCC
Q psy11734        365 IISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNES  444 (817)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (817)
                      .                                             +|++.|++.+.+.++..++..++.++++++.   
T Consensus       153 ~---------------------------------------------~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---  184 (485)
T TIGR00711       153 Y---------------------------------------------HWRWIFLINVPIGIIVVVVAFFILPRDKPAA---  184 (485)
T ss_pred             c---------------------------------------------CceehhhhhhHHHHHHHHHHHHHcCCccccc---
Confidence            4                                             6999999888777766655544444322211   


Q ss_pred             CCchhHHHHHHH--HHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734        445 ILPARYVLGIMG--CMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT  522 (817)
Q Consensus       445 ~~~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  522 (817)
                      ..+.++.-....  .+.......++.          +                                   +.++.+. 
T Consensus       185 ~~~~d~~g~~l~~~~~~~~~~~~~~~----------~-----------------------------------~~~~~~~-  218 (485)
T TIGR00711       185 SENFDFLGLLLLSVGLGSLLYGLSEG----------P-----------------------------------ERGWFDS-  218 (485)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHhhC----------C-----------------------------------CCCCCCc-
Confidence            112222211111  111111110000          0                                   1111111 


Q ss_pred             HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCch--hHHhh
Q psy11734        523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETP--WAAIL  600 (817)
Q Consensus       523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~--~~~~l  600 (817)
                                                  +...  .....++..+......  ..              -.+++  ..+.+
T Consensus       219 ----------------------------~~~~--~~~~~~~~~~~~~~~~--~~--------------~~~~~~~~~~~~  252 (485)
T TIGR00711       219 ----------------------------NEIL--ILSITGLVAIIAFVVW--EL--------------TDDNPLVDLRLF  252 (485)
T ss_pred             ----------------------------hHHH--HHHHHHHHHHHHHHHH--HH--------------cCCCCccCHHHH
Confidence                                        0000  0000000000000000  00              00111  23678


Q ss_pred             cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHH
Q psy11734        601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV  680 (817)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~  680 (817)
                      ++|+++...+..++.....++...++|.|+++.+|+++.+++.......++..++.++.|++.||+++|+.+        
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--------  324 (485)
T TIGR00711       253 KYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV--------  324 (485)
T ss_pred             cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH--------
Confidence            889998888888888899999999999999999999999999999999999999999999999999987543        


Q ss_pred             HHHHHHHHHHHHHHHHHh--hcC-chHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHH
Q psy11734        681 FATLGAVLPGVGALAASY--VGC-NTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPL  756 (817)
Q Consensus       681 ~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~  756 (817)
                        ..+..+..++..++.+  .+. +.+.......+.+++.+...++......+..| ++++++.|+.+..+++|+.+++.
T Consensus       325 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~  402 (485)
T TIGR00711       325 --TIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTA  402 (485)
T ss_pred             --HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence              3566666666655552  121 23344444555566665555555544445455 88999999999999999999999


Q ss_pred             HHHHhhcCC
Q psy11734        757 TVGFLTQNK  765 (817)
Q Consensus       757 ~~g~~~~~~  765 (817)
                      +.+.+.++.
T Consensus       403 i~g~~~~~~  411 (485)
T TIGR00711       403 LITTILTNR  411 (485)
T ss_pred             HHHHHHHHH
Confidence            999998864

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.89  E-value=9.6e-21  Score=211.42  Aligned_cols=369  Identities=12%  Similarity=0.066  Sum_probs=243.2

Q ss_pred             hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734        201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV  280 (817)
Q Consensus       201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~  280 (817)
                      .++++....+..+....+.......+|.++++.+|.|..+.|+......++..+++++.|+++||+|||+.         
T Consensus        13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~---------   83 (399)
T PRK05122         13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKA---------   83 (399)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcch---------
Confidence            35667778888888888888888899999988899999999999999999999999999999999999996         


Q ss_pred             HHHHHhHHHHHHHHhhhc---cCC----ChhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhccc
Q psy11734        281 FATLGAVLPGVGALAASY---VGC----NTSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGM  352 (817)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~  352 (817)
                       +..+.++..++......   ..+    +.......-.+.+.+.+...+.......+ .++|+|+++.++.+....+|..
T Consensus        84 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~  162 (399)
T PRK05122         84 -VVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALA  162 (399)
T ss_pred             -HHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHH
Confidence             66665555443332222   211    11122333334444444445544554455 4458999999999998889999


Q ss_pred             ccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhee
Q psy11734        353 VAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVL  432 (817)
Q Consensus       353 ~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~  432 (817)
                      +++.+.+.+.+..                                             +|+..+++.+++.++.....  
T Consensus       163 ~g~~l~~~l~~~~---------------------------------------------g~~~~~~~~~~~~~~~~~~~--  195 (399)
T PRK05122        163 IGAPLGVLLYHWG---------------------------------------------GLAGLGLLIMLLALLGLLLA--  195 (399)
T ss_pred             HHHHHHHHHHHcc---------------------------------------------cHHHHHHHHHHHHHHHHHHH--
Confidence            9999988776654                                             58888777665544333222  


Q ss_pred             ecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccc
Q psy11734        433 FGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTL  512 (817)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (817)
                        ++.++..+++  +                               +                                 
T Consensus       196 --~~~~~~~~~~--~-------------------------------~---------------------------------  207 (399)
T PRK05122        196 --RPRPAVPPVK--G-------------------------------E---------------------------------  207 (399)
T ss_pred             --hcCCCCCCCC--c-------------------------------c---------------------------------
Confidence              1111100000  0                               0                                 


Q ss_pred             cccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhccc
Q psy11734        513 DAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDL  592 (817)
Q Consensus       513 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~  592 (817)
                        +.  +.                              +                                         
T Consensus       208 --~~--~~------------------------------~-----------------------------------------  212 (399)
T PRK05122        208 --RL--PF------------------------------R-----------------------------------------  212 (399)
T ss_pred             --ch--hH------------------------------H-----------------------------------------
Confidence              00  00                              0                                         


Q ss_pred             CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy11734        593 ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDIL  672 (817)
Q Consensus       593 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~  672 (817)
                           +.++  +.+.......+....+.....+.|.|+++ .|.+  +.+.......++.+++++..|++.||+++|+.+
T Consensus       213 -----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~  282 (399)
T PRK05122        213 -----RVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVA  282 (399)
T ss_pred             -----HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence                 0000  00000011122233444556677888776 4653  456666778888999999999999999987543


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHH
Q psy11734        673 SRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSG  751 (817)
Q Consensus       673 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~  751 (817)
                                ..+..+..++.+.+...+ +.+.......+.+++.+..++.......+..| ++||++.|+.+...++|.
T Consensus       283 ----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  351 (399)
T PRK05122        283 ----------IVSLLVEILGLLLLWLAP-SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSL  351 (399)
T ss_pred             ----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence                      344555555555555543 44444444555555555556555555556666 889999999999999999


Q ss_pred             hHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        752 MVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       752 ~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                      .++|.+.|.+.|..|   |+..++..+++.+++.+.....++
T Consensus       352 ~~~~~~~g~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~  390 (399)
T PRK05122        352 GITGPLAGLVASWFG---YPSIFLAAALAALLGLALTWLLYR  390 (399)
T ss_pred             HHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999865   889999988888888777666543

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.89  E-value=1.1e-20  Score=210.03  Aligned_cols=287  Identities=9%  Similarity=-0.025  Sum_probs=218.1

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734        447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI  526 (817)
Q Consensus       447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~  526 (817)
                      +..|..+..+..+.+....+.+.....+|++.+                                   |+|+++++.|+.
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------------------------~~g~s~~~~g~~   60 (394)
T PRK10213         16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQ-----------------------------------DLGISEGVAGQS   60 (394)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-----------------------------------HcCCCHHHHHHH
Confidence            336676666666666666666666666788888                                   999999999999


Q ss_pred             HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------------
Q psy11734        527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---------------  591 (817)
Q Consensus       527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---------------  591 (817)
                      .+.+.+++.+++++.|.++||+|||+++..+.++.+++.+++++++  +++.+++.|+++|++.+               
T Consensus        61 ~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~  138 (394)
T PRK10213         61 VTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN--SFSLLLIGRACLGLALGGFWAMSASLTMRLVP  138 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999999999999  99999999999999988               


Q ss_pred             ---------------------------------------------------------cC---------chhHHhhcCHhH
Q psy11734        592 ---------------------------------------------------------LE---------TPWAAILSSLPV  605 (817)
Q Consensus       592 ---------------------------------------------------------~~---------~~~~~~l~~~~~  605 (817)
                                                                               ++         .+.++.+|+|++
T Consensus       139 ~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~~~~~~~~~l~~~~~  218 (394)
T PRK10213        139 PRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGV  218 (394)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccccchhHHHHHhcCHHH
Confidence                                                                     00         123467788999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734        606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG  685 (817)
Q Consensus       606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~  685 (817)
                      |...+..++.....++...+.++++.+++|+++.+.+......++++.++.++.+++.||.+++..          ....
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l----------~~~~  288 (394)
T PRK10213        219 MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLAL----------AGAP  288 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH----------HHHH
Confidence            888777777777777777787555555679999999999999999999999999999999543321          1222


Q ss_pred             HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy11734        686 AVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK  765 (817)
Q Consensus       686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~  765 (817)
                      .......+++.... ++.+.......+.+++.+...+...+..++..|++++.+.+......++|..+||.+.|.+.|..
T Consensus       289 ~~~~~~~~~l~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~  367 (394)
T PRK10213        289 LVLAVSALVLTLWG-SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNI  367 (394)
T ss_pred             HHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            22222223333333 24455555555566666666666666666667777788888888888999999999999999987


Q ss_pred             ccccHHHHHHHHHHHHHHH
Q psy11734        766 TLLEWRVVFWIMFLTLFIS  784 (817)
Q Consensus       766 g~~~~~~~~~~~~~~~~i~  784 (817)
                      |   ++..+...++..++.
T Consensus       368 g---~~~~~~~~~~~~~~~  383 (394)
T PRK10213        368 G---LTSPLMLSGTLMLLT  383 (394)
T ss_pred             C---hhhHHHHHHHHHHHH
Confidence            5   556666665554443

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.89  E-value=2.8e-21  Score=212.49  Aligned_cols=354  Identities=15%  Similarity=0.107  Sum_probs=255.6

Q ss_pred             HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhH
Q psy11734        208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAV  287 (817)
Q Consensus       208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~  287 (817)
                      .....++...........+|.|..+ .+.+..+.+++.....++..+++++.|+++||+|||+.          ...+..
T Consensus         4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~----------~~~~~~   72 (365)
T TIGR00900         4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKV----------MIGADL   72 (365)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHH----------HHHHHH
Confidence            4455566666666667778888877 69999999999999999999999999999999999986          555555


Q ss_pred             HHHHHHHhhhccC----CChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734        288 LPGVGALAASYVG----CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT  362 (817)
Q Consensus       288 ~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~  362 (817)
                      +..++........    .+.+.......+.+.+.+...+.......|..| ++|++++++.+....+|..++|.+.+.+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~  152 (365)
T TIGR00900        73 IRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY  152 (365)
T ss_pred             HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            4444433333222    144555555555566666667777777778766 79999999999999999999999998877


Q ss_pred             ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccccc
Q psy11734        363 QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWN  442 (817)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~  442 (817)
                      +..                                             +|+..|++.++..+++.++...+..+++++.+
T Consensus       153 ~~~---------------------------------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (365)
T TIGR00900       153 ATL---------------------------------------------GIKWAIWVDAVGFAISALLIVSVRIPELAASE  187 (365)
T ss_pred             HHh---------------------------------------------hHHHHHHHHHHHHHHHHHHHHhcccccCCCcc
Confidence            654                                             69999998877766665544333222111000


Q ss_pred             CCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734        443 ESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT  522 (817)
Q Consensus       443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  522 (817)
                      ++                                                                      +.  ++..
T Consensus       188 ~~----------------------------------------------------------------------~~--~~~~  195 (365)
T TIGR00900       188 IQ----------------------------------------------------------------------AL--SNAV  195 (365)
T ss_pred             cc----------------------------------------------------------------------cc--chhH
Confidence            00                                                                      00  0000


Q ss_pred             HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcC
Q psy11734        523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSS  602 (817)
Q Consensus       523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~  602 (817)
                                                                     ..+                   ..+++++++|+
T Consensus       196 -----------------------------------------------~~~-------------------~~~~~~~~~~~  209 (365)
T TIGR00900       196 -----------------------------------------------LRD-------------------TREGIKFVLKN  209 (365)
T ss_pred             -----------------------------------------------HHH-------------------HHhHHHHHHcC
Confidence                                                           000                   00124567788


Q ss_pred             HhHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734        603 LPVWSLIISEVGHDYGFYLIS-SDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF  681 (817)
Q Consensus       603 ~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~  681 (817)
                      |.++......++......... .+.|.|.++.+|.+..+.+.......++.+++.+..+++.||++||+.+         
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---------  280 (365)
T TIGR00900       210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM---------  280 (365)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH---------
Confidence            888888888888877777776 8899999988899999999999999999999999999999999887543         


Q ss_pred             HHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHH
Q psy11734        682 ATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGF  760 (817)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~  760 (817)
                       ..+..+.+++++.+.+.+++.+......++.+++.+...+.......|..| ++|+++.|+.+...++++.++|.+.|.
T Consensus       281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~  359 (365)
T TIGR00900       281 -TGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGP  359 (365)
T ss_pred             -HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             344555555555555543224444555556666666667777777888777 789999999999999999999999999


Q ss_pred             hhcCC
Q psy11734        761 LTQNK  765 (817)
Q Consensus       761 ~~~~~  765 (817)
                      +.|+.
T Consensus       360 l~~~~  364 (365)
T TIGR00900       360 LADHL  364 (365)
T ss_pred             HHHHc
Confidence            98875

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.89  E-value=1.1e-22  Score=222.75  Aligned_cols=255  Identities=14%  Similarity=0.023  Sum_probs=186.5

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|+|++. .+.....++|++|+|||++++++.+.+..+|..+++++++++.+ ..|||+.|++.+.++++..++++
T Consensus        85 ~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-~~gWr~~f~~~~~l~~~~~~~~~  162 (368)
T TIGR00903        85 CQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-AGGLQLLIIPIAAVAAAGIILVL  162 (368)
T ss_pred             HHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHHHHHHH
Confidence            49999999995 66777778999999999999999999999999999999999999 89999999999998888888888


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +.+||+|+++++..  +.+       +                                                     
T Consensus       163 ~~lp~~p~~~~~~~--~~~-------~-----------------------------------------------------  180 (368)
T TIGR00903       163 AALPALPFQAAEGF--GFK-------D-----------------------------------------------------  180 (368)
T ss_pred             HHcCCCCCCCCCCc--chH-------H-----------------------------------------------------
Confidence            88888764321100  000       0                                                     


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                     ...++++++|||.+|...+..++....++++.+|+|.|+++ +|++.. 
T Consensus       181 -------------------------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-  227 (368)
T TIGR00903       181 -------------------------------AVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-  227 (368)
T ss_pred             -------------------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-
Confidence                                           01136789999999999999999999999999999999977 688865 


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      .+.......+.+.++   .++++||.+||+.      |+...........+.+..+.... +.......+.+.+++....
T Consensus       228 ~~~~~~l~~~~g~~g---~~~~~d~~~r~~~------r~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~  297 (368)
T TIGR00903       228 AGDAVALAILAGLIG---VAVIPDRVARAGL------RSIYIRAAALLIAAFFLALAFEL-NRLALFAFIGIAGLLMLPA  297 (368)
T ss_pred             HHHHHHHHHHHHHHH---HHHhhHHhhhhhh------HHHHHHHHHHHHHHHHHHHHHcc-ccHHHHHHHHHHHHhhhhh
Confidence            555555555544444   5889999876542      22222222233333333333333 2333344444444545455


Q ss_pred             cccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734        321 YASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT  362 (817)
Q Consensus       321 ~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~  362 (817)
                      .+....+..|..| +.||++.|+.+..+++++..+|.+.+.+.
T Consensus       298 ~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~  340 (368)
T TIGR00903       298 YAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI  340 (368)
T ss_pred             HHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence            5556677788777 68999999999999999999998877554

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK10054 putative transporter; Provisional

Probab=99.88  E-value=2.2e-21  Score=215.72  Aligned_cols=369  Identities=15%  Similarity=0.135  Sum_probs=253.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734        202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF  281 (817)
Q Consensus       202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~  281 (817)
                      +++++...+..++...+.+....++|.|+++.+|+|..+.|+..+...++..++++..|+++||+|+|+.          
T Consensus         6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~----------   75 (395)
T PRK10054          6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRY----------   75 (395)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh----------
Confidence            3457788888999999999999999999998899999999999999999999999999999999999986          


Q ss_pred             HHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhhcccccccccce
Q psy11734        282 ATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGF  360 (817)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~  360 (817)
                      +..+..+..++...+.+.+ +.+.......+.+...+...+.......|.. +++|+++.|+.+...++|.+++|.+.+.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~  154 (395)
T PRK10054         76 MLLAITAFASGFIAIPLVN-NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTL  154 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5666666666666665554 3333333333333333333444555555654 5789999999999999999999999887


Q ss_pred             ecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734        361 LTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY  440 (817)
Q Consensus       361 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~  440 (817)
                      +.+ .                                             +|+..|++.+++.+++.++..++.++++++
T Consensus       155 l~~-~---------------------------------------------g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~  188 (395)
T PRK10054        155 LVM-Q---------------------------------------------SINLPFWLAAICSAFPLVFIQIWVQRSEKA  188 (395)
T ss_pred             HHH-h---------------------------------------------ccCcHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            653 2                                             588899988877776654443322222111


Q ss_pred             ccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCCh
Q psy11734        441 WNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDE  520 (817)
Q Consensus       441 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  520 (817)
                      .+++                                                                      + +  +
T Consensus       189 ~~~~----------------------------------------------------------------------~-~--~  195 (395)
T PRK10054        189 IATE----------------------------------------------------------------------T-G--S  195 (395)
T ss_pred             cccc----------------------------------------------------------------------h-h--h
Confidence            0000                                                                      0 0  0


Q ss_pred             hhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhh
Q psy11734        521 RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAIL  600 (817)
Q Consensus       521 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l  600 (817)
                                                                         .                     .+.++.+
T Consensus       196 ---------------------------------------------------~---------------------~~~~~~~  203 (395)
T PRK10054        196 ---------------------------------------------------V---------------------WSPSVLL  203 (395)
T ss_pred             ---------------------------------------------------h---------------------hhhhhhc
Confidence                                                               0                     0123567


Q ss_pred             cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh--CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734        601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI--GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR  678 (817)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~--g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r  678 (817)
                      |+|+++...+..++.......+..+.+.|+.+..  +.+....+.......+.....++..|++.||.++|+.+      
T Consensus       204 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l------  277 (395)
T PRK10054        204 QDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLM------  277 (395)
T ss_pred             cCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHH------
Confidence            7888888877777777777777778888876543  44555667777777777777788889999999877643      


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHH
Q psy11734        679 KVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLT  757 (817)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~  757 (817)
                          ..++.+..+....+....++.+...+...+.+.+.....+.......+..| +.+++..+..+ ...+|..++|.+
T Consensus       278 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~  352 (395)
T PRK10054        278 ----TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLV  352 (395)
T ss_pred             ----HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHH
Confidence                355555555555554432234333444444455444445555566767777 67899988765 677899999999


Q ss_pred             HHHhhcCCccccHHHHHHHHHHHHHHHHH
Q psy11734        758 VGFLTQNKTLLEWRVVFWIMFLTLFISNV  786 (817)
Q Consensus       758 ~g~~~~~~g~~~~~~~~~~~~~~~~i~~~  786 (817)
                      +|.+.|+.|   ++..|++.+....+..+
T Consensus       353 ~G~l~~~~g---~~~~~~~~~~~~~~~~~  378 (395)
T PRK10054        353 SGVILTTLP---PWSLFVILALAIVAAWL  378 (395)
T ss_pred             HHHHHHHcC---hhhHHHHHHHHHHHHHH
Confidence            999999986   55666665555444443

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.88  E-value=1.6e-20  Score=209.06  Aligned_cols=373  Identities=11%  Similarity=0.070  Sum_probs=239.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHH-HHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734        202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFL-IMWLVSMSSSALADFFIARDILSRTNVRKV  280 (817)
Q Consensus       202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i-~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~  280 (817)
                      |.+.+...+..++...........+|.|+++.+|.|+.+.|+......+ +...+.+.+++ +||+|+||.         
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~---------   83 (393)
T PRK15011         14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKS---------   83 (393)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhH---------
Confidence            6677788888888888888888999999998899999999998766555 45555555566 999999875         


Q ss_pred             HHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-Cch--hHHHHHHHhhhhhcccccccc
Q psy11734        281 FATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFS--GTIMALSNGLGCVSGMVAPLT  357 (817)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~--g~a~g~~~~~~~lg~~~~~~i  357 (817)
                      ++..+.+...+......+.+ +.+.......+..+......+.......+..+ +.|  +...+..+....+|.+++|.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i  162 (393)
T PRK15011         84 LIVFCCLLGVLACTLFAWNR-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPL  162 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHH
Confidence            13344444334444443432 33322222122222222333334444455433 333  345578888899999999999


Q ss_pred             cceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734        358 VGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE  437 (817)
Q Consensus       358 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~  437 (817)
                      .+.+.++.                                             +|+..|++.++..++..+...++.|+.
T Consensus       163 ~~~l~~~~---------------------------------------------gw~~~f~~~~~~~~~~~~~~~~~~~~~  197 (393)
T PRK15011        163 AYALAMGF---------------------------------------------SFTVMYLSAAVAFIVCGVMVWLFLPSM  197 (393)
T ss_pred             HHHHHHhc---------------------------------------------ChHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence            99888765                                             699999998887776655544433332


Q ss_pred             cccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccccc
Q psy11734        438 VQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFD  517 (817)
Q Consensus       438 ~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (817)
                      +++.++.  +                               +                                   +.+
T Consensus       198 ~~~~~~~--~-------------------------------~-----------------------------------~~~  209 (393)
T PRK15011        198 RKELPLA--T-------------------------------G-----------------------------------TLE  209 (393)
T ss_pred             CCCCccc--c-------------------------------c-----------------------------------ccc
Confidence            2110000  0                               0                                   000


Q ss_pred             CChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhH
Q psy11734        518 WDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWA  597 (817)
Q Consensus       518 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~  597 (817)
                        .                         .|..+|.                                             
T Consensus       210 --~-------------------------~~~~~~~---------------------------------------------  217 (393)
T PRK15011        210 --A-------------------------PRRNRRD---------------------------------------------  217 (393)
T ss_pred             --c-------------------------ccccccc---------------------------------------------
Confidence              0                         0000010                                             


Q ss_pred             HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchh
Q psy11734        598 AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNV  677 (817)
Q Consensus       598 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~  677 (817)
                             .+.............+.+..+.|.|+++.+|+++.+.+.+.....+..+++.++.|+++||+++|+.+     
T Consensus       218 -------~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~-----  285 (393)
T PRK15011        218 -------TLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLM-----  285 (393)
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH-----
Confidence                   11111112222234444567899999998999999999888888888899999999999999987542     


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHH
Q psy11734        678 RKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  757 (817)
Q Consensus       678 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~  757 (817)
                           ..+.....+.+......+ +.+.......+.++..+...+......+|..|+++++++++.+...++|+.++|.+
T Consensus       286 -----~~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l  359 (393)
T PRK15011        286 -----RVAAVAGVCFYAGMLMAH-SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSL  359 (393)
T ss_pred             -----HHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence                 233333333332232222 44444444444444444444445566678889889999999999999999999999


Q ss_pred             HHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        758 VGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       758 ~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      .|.+.|..+   |+..+++.+++.+++.+..++.
T Consensus       360 ~G~i~~~~g---~~~~~~~~~~~~~~~~~~~~~~  390 (393)
T PRK15011        360 AGIVAEIWN---YHAVFWFALVMIIATLFCLLRI  390 (393)
T ss_pred             HHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhh
Confidence            999999865   8889888888888877777665

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.88  E-value=2.2e-20  Score=214.85  Aligned_cols=419  Identities=13%  Similarity=0.075  Sum_probs=240.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHH
Q psy11734        204 PVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFAT  283 (817)
Q Consensus       204 ~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~  283 (817)
                      .+....+..++............|.+.+ .+|.|..+.++......++..++.++.|+++||+|||+.          +.
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------~~   89 (496)
T PRK03893         21 AFSAAWLGYLLDGFDFVLITLVLTEVQG-EFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLA----------MV   89 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH----------HH
Confidence            4455566666666666666666776554 589999999999999999999999999999999999985          66


Q ss_pred             HHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734        284 LGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT  362 (817)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~  362 (817)
                      .+..+..++.....+.+ +.+.......+.+.+.+...+.......+..| ++|+.+.++.+....+|..++|.+.+.+.
T Consensus        90 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~  168 (496)
T PRK03893         90 ISIVLFSVGTLACGFAP-GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV  168 (496)
T ss_pred             HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            66666666666665544 44444444444455555555555556666555 78999999999999999999999988776


Q ss_pred             ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccccc
Q psy11734        363 QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWN  442 (817)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~  442 (817)
                      +..                                             +|+..|++.++..++........++.++.+.+
T Consensus       169 ~~~---------------------------------------------~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~  203 (496)
T PRK03893        169 PVW---------------------------------------------GWRALFFIGILPIIFALWLRKNLPEAEDWKEK  203 (496)
T ss_pred             ccC---------------------------------------------CHHHHHHHHHHHHHHHHHHHHhCCCchhhhhh
Confidence            543                                             69999987554443332221111111000000


Q ss_pred             CCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccc-ccCChh
Q psy11734        443 ESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAK-FDWDER  521 (817)
Q Consensus       443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~  521 (817)
                      ++ .+.+.                                                           .+..+. +..+..
T Consensus       204 ~~-~~~~~-----------------------------------------------------------~~~~~~~~~~~~~  223 (496)
T PRK03893        204 HA-GKAPV-----------------------------------------------------------RTMVDILYRGEHR  223 (496)
T ss_pred             cc-ccccc-----------------------------------------------------------hhHHHHHhcchhH
Confidence            00 00000                                                           000000 000001


Q ss_pred             hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734        522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS  601 (817)
Q Consensus       522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~  601 (817)
                      ..+.......... +..     ......+.........+.. ......+..                       ..+..+
T Consensus       224 ~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------------------~~~~~~  273 (496)
T PRK03893        224 IINILLTLAAAAA-LWF-----CFAGNLQNAAIVAVLGLLC-AAIFISFMV-----------------------QSSGKR  273 (496)
T ss_pred             HHHHHHHHHHHHH-HHH-----HHHhhhcchhHHHHHHHHH-HHHHHHHHH-----------------------Hhcccc
Confidence            1111111000000 000     0000001111111111111 111111111                       000011


Q ss_pred             CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734        602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF  681 (817)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~  681 (817)
                      .+.........+......+....++|.|+++.+|++..+++.+.+...++.+++.++.|+++||+++|+.+         
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~---------  344 (496)
T PRK03893        274 WPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY---------  344 (496)
T ss_pred             hhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH---------
Confidence            22222223333333333345678899999888999999999999999999999999999999999987643         


Q ss_pred             HHHHHHHHHHHHHHHHhhcCch-HHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHH
Q psy11734        682 ATLGAVLPGVGALAASYVGCNT-SMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVG  759 (817)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g  759 (817)
                       ..+..+..+..+.+....... +.......+.++......+......++..| ++||+++|+.+....+|+.++|.+.|
T Consensus       345 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g  423 (496)
T PRK03893        345 -VCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGA  423 (496)
T ss_pred             -HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHH
Confidence             234444333333333222222 222222222222222233444566777777 78999999999999999999999999


Q ss_pred             HhhcCCccccHHHHHHHHHHHHH
Q psy11734        760 FLTQNKTLLEWRVVFWIMFLTLF  782 (817)
Q Consensus       760 ~~~~~~g~~~~~~~~~~~~~~~~  782 (817)
                      .+.|..|   |+..+...+....
T Consensus       424 ~l~~~~g---~~~~~~~~~~~~~  443 (496)
T PRK03893        424 LIAQRLD---LGTALASLSFSLT  443 (496)
T ss_pred             HHhccCC---hHHHHHHHHHHHH
Confidence            9999976   6666655444433

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.88  E-value=2.6e-20  Score=213.41  Aligned_cols=399  Identities=13%  Similarity=0.073  Sum_probs=264.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHH
Q psy11734        205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATL  284 (817)
Q Consensus       205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~  284 (817)
                      +....+..++...-...+..-+|.+.++ +|.+..+.++......++..+..+..|+++||+|||+.          ...
T Consensus         8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~----------l~~   76 (495)
T PRK14995          8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL----------LML   76 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHH
Confidence            4455556666666666677778888766 79999999999999999999999999999999999986          777


Q ss_pred             HhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccc-cccccC-CCchhHHHHHHHhhhhhcccccccccceec
Q psy11734        285 GAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRV-NPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLT  362 (817)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~-~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~  362 (817)
                      +..+..++.......+ +.....+.-.+.+.+.+...+.... ...+.. +++|+++.|+......+|..+||.+.|.+.
T Consensus        77 ~~~~~~~~~~~~~~a~-~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~  155 (495)
T PRK14995         77 GGTLFGLASLAAAFSP-TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL  155 (495)
T ss_pred             HHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            7777777766666654 5554444444445555555444433 335554 479999999999999999999999999988


Q ss_pred             ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccccc
Q psy11734        363 QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWN  442 (817)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~  442 (817)
                      ++.                                             +||+.|++...+.++..++..+..++++++..
T Consensus       156 ~~~---------------------------------------------gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~  190 (495)
T PRK14995        156 EHF---------------------------------------------YWGSVFLINVPIVLVVMGLTARYVPRQAGRRD  190 (495)
T ss_pred             ccC---------------------------------------------ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            765                                             69999999887777666655444443322111


Q ss_pred             CCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734        443 ESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT  522 (817)
Q Consensus       443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  522 (817)
                      +   +.++.-.....                                                                 
T Consensus       191 ~---~~d~~g~~~~~-----------------------------------------------------------------  202 (495)
T PRK14995        191 Q---PLNLGHALMLI-----------------------------------------------------------------  202 (495)
T ss_pred             C---CCChHhHHHHH-----------------------------------------------------------------
Confidence            1   11110000000                                                                 


Q ss_pred             HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchh--HHhh
Q psy11734        523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPW--AAIL  600 (817)
Q Consensus       523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~--~~~l  600 (817)
                          .+...+.+.+..   +. -+..  ...........++..+......+.              -  .+.|.  .+++
T Consensus       203 ----~~~~~l~~~~~~---~~-~~~~--~~~~~~~~~~~~~~~l~~f~~~e~--------------~--~~~p~~~~~lf  256 (495)
T PRK14995        203 ----VAILLLVYSAKT---AL-KGFL--SLWVTSLTLLTGALLLGLFIRTQL--------------A--ASRPMIDMRLF  256 (495)
T ss_pred             ----HHHHHHHHHHHh---cc-ccCC--chHHHHHHHHHHHHHHHHHHHHHh--------------c--CCCCCcCHHHh
Confidence                000000000000   00 0000  111111111111111111111100              0  11222  4688


Q ss_pred             cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHH
Q psy11734        601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV  680 (817)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~  680 (817)
                      |+|.++...+..++.....++...+.|.|+++++|+|+.+++....+..++..++.++.|++.||+|+|+.+        
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--------  328 (495)
T PRK14995        257 THRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA--------  328 (495)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH--------
Confidence            999998888888888888899999999999999999999999999999999999999999999999986542        


Q ss_pred             HHHHHHHHHHHHHHHHHhhc--CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHH
Q psy11734        681 FATLGAVLPGVGALAASYVG--CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLT  757 (817)
Q Consensus       681 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~  757 (817)
                        ..+..+..++..++....  .+.+......++.+++.+...+.......+..| ++++.+.++.++.+++|+.+|+.+
T Consensus       329 --~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai  406 (495)
T PRK14995        329 --TGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAI  406 (495)
T ss_pred             --HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHH
Confidence              355555555554443322  233444445556666666666666655555555 889999999999999999999999


Q ss_pred             HHHhhcC
Q psy11734        758 VGFLTQN  764 (817)
Q Consensus       758 ~g~~~~~  764 (817)
                      .|.+.++
T Consensus       407 ~g~i~~~  413 (495)
T PRK14995        407 FGLLLSR  413 (495)
T ss_pred             HHHHHHH
Confidence            9988764

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.88  E-value=9.4e-21  Score=212.10  Aligned_cols=374  Identities=16%  Similarity=0.151  Sum_probs=246.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc-----cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchh
Q psy11734        202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE-----NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTN  276 (817)
Q Consensus       202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~-----ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~  276 (817)
                      ++++....+..++..........++|.|.++ +|.+..+     .|.......+...++.++.|+++||++||+.     
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-----   86 (408)
T PRK09874         13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIM-----   86 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHH-----
Confidence            3455566677777777877788889999987 6888665     3788888899999999999999999999875     


Q ss_pred             hHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhcccccc
Q psy11734        277 VRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAP  355 (817)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~  355 (817)
                           ...+.....++...+...+ +.+...+...+.+.+.+. .+.......+ .++++|+++.++.+....+|..++|
T Consensus        87 -----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  159 (408)
T PRK09874         87 -----LLRSALGMGIVMVLMGLAQ-NIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGP  159 (408)
T ss_pred             -----HHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHH
Confidence                 5556666566555554443 443333333333333332 3333334444 4457899999999999999999999


Q ss_pred             cccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734        356 LTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS  435 (817)
Q Consensus       356 ~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~  435 (817)
                      .+.+.+.+..                                             +|+..|++.+++.+++.+...++.+
T Consensus       160 ~~~~~l~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~  194 (408)
T PRK09874        160 LAGGLLADSY---------------------------------------------GLRPVFFITASVLFLCFLVTLFCIR  194 (408)
T ss_pred             HHHHHHHHHh---------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9988876653                                             6999999988877766655544433


Q ss_pred             cccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccc
Q psy11734        436 GEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAK  515 (817)
Q Consensus       436 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (817)
                      +++++.+++                                  +                                   +
T Consensus       195 ~~~~~~~~~----------------------------------~-----------------------------------~  205 (408)
T PRK09874        195 ENFQPVSKK----------------------------------E-----------------------------------M  205 (408)
T ss_pred             cCcccccch----------------------------------h-----------------------------------h
Confidence            322110000                                  0                                   0


Q ss_pred             ccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCch
Q psy11734        516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETP  595 (817)
Q Consensus       516 ~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~  595 (817)
                      .+  ..                                                                         +
T Consensus       206 ~~--~~-------------------------------------------------------------------------~  210 (408)
T PRK09874        206 LH--MR-------------------------------------------------------------------------E  210 (408)
T ss_pred             hH--HH-------------------------------------------------------------------------H
Confidence            00  00                                                                         0


Q ss_pred             hHHhhcCHhHHHH-HHHHHHHHHHHHHHHhhHHHHHHHHhCCChh---HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q psy11734        596 WAAILSSLPVWSL-IISEVGHDYGFYLISSDLPKYMSQVIGLSVA---ENGVLSALPFLIMWLVSMSSSALADYLIVRDI  671 (817)
Q Consensus       596 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~---~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~  671 (817)
                      ..+.+++|+.+.. ....+........+..+.|.|+.+..+....   ..+.+.....++.+++.+..|+++||++||+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~  290 (408)
T PRK09874        211 VVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI  290 (408)
T ss_pred             HHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh
Confidence            0112233333222 2222233334444566778888775432221   24556666778889999999999999998875


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHH
Q psy11734        672 LSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVS  750 (817)
Q Consensus       672 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g  750 (817)
                      +          ..+..+..++++.....+ +.+......++.+++.+...+...+...+..| +++|+..++.+....+|
T Consensus       291 ~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g  359 (408)
T PRK09874        291 L----------ITALIFSVLLLIPMSFVQ-TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIG  359 (408)
T ss_pred             H----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHH
Confidence            4          244444444444444433 44554455555566666666666666666665 78999999999999999


Q ss_pred             HhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        751 GMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       751 ~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      ..++|.+.|.+.|..+   |+..|++.+++.+++.+..+..
T Consensus       360 ~~~gp~~~G~l~~~~g---~~~~f~~~~~~~l~~~~~~~~~  397 (408)
T PRK09874        360 NVTGPLMGAAISANYG---FRAVFLVTAGVVLFNAVYSWNS  397 (408)
T ss_pred             HHhhHHHHHHHHhhcc---hhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999865   8899999999888887776654

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.88  E-value=4.9e-20  Score=210.19  Aligned_cols=386  Identities=16%  Similarity=0.147  Sum_probs=263.1

Q ss_pred             HHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH-----hhcCc
Q psy11734        197 AAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF-----IARDI  271 (817)
Q Consensus       197 ~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-----g~r~~  271 (817)
                      .+..++|+.+......+..+...+.....+|.++++ .|.|..+.|.... .+... ++.++.|+++||+     |||+.
T Consensus         6 l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~-~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~   82 (491)
T PRK11010          6 LRIFQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSL-VGQAY-VFKFLWSPLMDRYTPPFLGRRRG   82 (491)
T ss_pred             HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHH-HHHHH-HHHHHHHHHHHcccccCCCCchH
Confidence            356677888888888888888888888899999988 4999999988633 22222 6889999999999     77764


Q ss_pred             ccchhhHHHHHHHHhHHHHHHHHhhhccCC--ChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhh
Q psy11734        272 LSRTNVRKVFATLGAVLPGVGALAASYVGC--NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC  348 (817)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~  348 (817)
                               .+..+.+...++...+.+..+  +.+.......+..++.....+...++..|..| |+|+++.++......
T Consensus        83 ---------~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~  153 (491)
T PRK11010         83 ---------WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYR  153 (491)
T ss_pred             ---------HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHH
Confidence                     355666665555555544432  33344444444455555555556677777665 899999999999999


Q ss_pred             hcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhh
Q psy11734        349 VSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNV  428 (817)
Q Consensus       349 lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~  428 (817)
                      +|..+++.+.+.+.+..                                            .+|+..|++.+++.++..+
T Consensus       154 lG~llg~~l~~~l~~~~--------------------------------------------~GWr~~f~i~a~l~ll~~l  189 (491)
T PRK11010        154 LAMLVSGGLALWLADRY--------------------------------------------LGWQGMYWLMAALLIPCII  189 (491)
T ss_pred             HHHHHHHHHHHHHHhcc--------------------------------------------cCHHHHHHHHHHHHHHHHH
Confidence            99999988877766521                                            1799999999888777655


Q ss_pred             hheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecc
Q psy11734        429 FFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKT  508 (817)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (817)
                      ..++. |++++. +++                                  +                             
T Consensus       190 ~~~~~-~e~~~~-~~~----------------------------------~-----------------------------  204 (491)
T PRK11010        190 ATLLA-PEPTDT-IPV----------------------------------P-----------------------------  204 (491)
T ss_pred             HHHhc-CCCccc-ccc----------------------------------c-----------------------------
Confidence            54443 221110 000                                  0                             


Q ss_pred             cccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhh
Q psy11734        509 YTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGV  588 (817)
Q Consensus       509 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gi  588 (817)
                            + +  ..                             +                    +                
T Consensus       205 ------~-~--~~-----------------------------~--------------------~----------------  210 (491)
T PRK11010        205 ------K-T--LE-----------------------------Q--------------------A----------------  210 (491)
T ss_pred             ------c-c--hh-----------------------------h--------------------h----------------
Confidence                  0 0  00                             0                    0                


Q ss_pred             hcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHH-HHHHHHHHHHHHHHHHHhhhh
Q psy11734        589 GEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSA-LPFLIMWLVSMSSSALADYLI  667 (817)
Q Consensus       589 g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~-~~~~~~~ig~~~~g~l~dr~g  667 (817)
                         ...++++.+++++.|......++.....+....+.|+|+.+++|+|..+.+.... ...++.++|.+++|+++||++
T Consensus       211 ---~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g  287 (491)
T PRK11010        211 ---VVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLS  287 (491)
T ss_pred             ---HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               0012455666777776666666777777777888999998889999999999874 566899999999999999999


Q ss_pred             cccccccchhhHHHHHHHHHHHHHHH---HHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHH
Q psy11734        668 VRDILSRTNVRKVFATLGAVLPGVGA---LAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALS  743 (817)
Q Consensus       668 ~~~~~~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~  743 (817)
                      +|+.+          ..+.++.++..   ..+....++.+.......+..++.+...+...+...+..+ +.+++..|+.
T Consensus       288 ~~~~l----------~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~  357 (491)
T PRK11010        288 LFRAL----------MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALL  357 (491)
T ss_pred             HHHHH----------HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence            87532          12222222222   2222222233333333333333334444555666667666 6799999999


Q ss_pred             HHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        744 NGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       744 ~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                      +....+|+.+++.+.|.+.|..|   |+..|.+.+++.+++.+.....++
T Consensus       358 ~s~~~lg~~~~~~~~G~l~~~~G---~~~~f~~~~~~~l~~l~~~~~~~~  404 (491)
T PRK11010        358 SALSAVGRVYVGPVAGWFVEAHG---WPTFYLFSVAAAVPGLLLLLVCRQ  404 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999875   888999999998888877776643

>PRK11043 putative transporter; Provisional

Probab=99.88  E-value=3.9e-20  Score=206.59  Aligned_cols=346  Identities=16%  Similarity=0.139  Sum_probs=233.2

Q ss_pred             HHHHHHHHHHHHHHhhchhhH--HHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHh
Q psy11734        209 IISEVGHDYGLYLISTDLPKY--MSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGA  286 (817)
Q Consensus       209 ~i~~~~~~~~~~~~~~~~p~~--l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~  286 (817)
                      ..........+++...+.|.+  +++.+|.|+.+.++......++..++++++|+++||+|||+.          +..+.
T Consensus         9 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~----------~~~~~   78 (401)
T PRK11043          9 VYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPV----------LLAGL   78 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHH----------HHHHH
Confidence            333333444555555666655  556689999999999999999999999999999999999986          66666


Q ss_pred             HHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        287 VLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      .+..++.....+.+ +.+...+...+.+.+.+...+.......|..| ++++...+..+....++..++|.+.+.+.+..
T Consensus        79 ~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~  157 (401)
T PRK11043         79 SLFALGSLGMLWVE-SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF  157 (401)
T ss_pred             HHHHHHHHHHHHhc-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            66666655555544 44444433333333333333334445556555 67888889998888999999999988877654


Q ss_pred             cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734        366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI  445 (817)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (817)
                                                                   +|+..|++.+++.++..+...++.++++++   + 
T Consensus       158 ---------------------------------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-  188 (401)
T PRK11043        158 ---------------------------------------------GWQAIFATLFAITLLLILPTLRLKPSKKAR---K-  188 (401)
T ss_pred             ---------------------------------------------ChHHHHHHHHHHHHHHHHHHHHcCCCCCcc---c-
Confidence                                                         699999988887776665554443221100   0 


Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                                                      .+                                   +          
T Consensus       189 --------------------------------~~-----------------------------------~----------  191 (401)
T PRK11043        189 --------------------------------QS-----------------------------------Q----------  191 (401)
T ss_pred             --------------------------------cc-----------------------------------h----------
Confidence                                            00                                   0          


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhH
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPV  605 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~  605 (817)
                                                                    .                    +.++++++|+|+.
T Consensus       192 ----------------------------------------------~--------------------~~~~~~~~~~~~~  205 (401)
T PRK11043        192 ----------------------------------------------D--------------------ALTFKQLLKSKTY  205 (401)
T ss_pred             ----------------------------------------------H--------------------HHHHHHHHcChhH
Confidence                                                          0                    0123456667777


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734        606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG  685 (817)
Q Consensus       606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~  685 (817)
                      +...+...+....++.+..+.|.|+++ .|+++.+.+.......++..+|.+..+++.||+++|+..       ......
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~-------~~~~~~  277 (401)
T PRK11043        206 LGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL-------PWLLVL  277 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-------HHHHHH
Confidence            666666666666777788889998876 799999999888888889999999999999999887532       111122


Q ss_pred             HHHHHHHHHHHHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcC
Q psy11734        686 AVLPGVGALAASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  764 (817)
Q Consensus       686 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~  764 (817)
                      ..+..+.+...... .++.+.......+.++..+..++.......+..|+++|++.|+.+..+..++..++.+.|.+.|.
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~  357 (401)
T PRK11043        278 FAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIST  357 (401)
T ss_pred             HHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            22222222222221 22333334444455555566666666666677788999999999999999999999999999875


Q ss_pred             C
Q psy11734        765 K  765 (817)
Q Consensus       765 ~  765 (817)
                      .
T Consensus       358 ~  358 (401)
T PRK11043        358 P  358 (401)
T ss_pred             C
Confidence            4

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.88  E-value=1.7e-20  Score=208.11  Aligned_cols=343  Identities=16%  Similarity=0.167  Sum_probs=238.0

Q ss_pred             HHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH
Q psy11734        212 EVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV  291 (817)
Q Consensus       212 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~  291 (817)
                      .+.............|.+.+ .+|.|..+.+++.....++..+++++.|+++||+|||+.          ...+..+..+
T Consensus        14 ~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~----------~~~~~~~~~~   82 (385)
T TIGR00710        14 SILGPLGIDMYLPAFPEIAA-DLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPV----------LLLGLFIFAL   82 (385)
T ss_pred             HHHHHHHHHHhcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH----------HHHHHHHHHH
Confidence            33344444455555666555 489999999999999999999999999999999999885          6666666666


Q ss_pred             HHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCC
Q psy11734        292 GALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINP  370 (817)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~  370 (817)
                      +.......+ +.....+...+.+.+.+...+.......|..| ++|+++.++.+....+|..++|.+.+.+.+..     
T Consensus        83 ~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-----  156 (385)
T TIGR00710        83 SSLGLALSN-NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-----  156 (385)
T ss_pred             HHHHHHHHc-cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence            666665554 44444444455555555555656666777655 78999999999999999999999988776653     


Q ss_pred             CCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhH
Q psy11734        371 IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARY  450 (817)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (817)
                                                              +|+..|++.+++.++..+...++.++++++.++       
T Consensus       157 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  189 (385)
T TIGR00710       157 ----------------------------------------SWHAIFAFLSLAGILLSALIFFILPETLPYEAR-------  189 (385)
T ss_pred             ----------------------------------------CHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc-------
Confidence                                                    699999988877776665544433322110000       


Q ss_pred             HHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHH
Q psy11734        451 VLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAF  530 (817)
Q Consensus       451 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~  530 (817)
                                                  +                                   +.+             
T Consensus       190 ----------------------------~-----------------------------------~~~-------------  193 (385)
T TIGR00710       190 ----------------------------I-----------------------------------QIS-------------  193 (385)
T ss_pred             ----------------------------C-----------------------------------CHH-------------
Confidence                                        0                                   000             


Q ss_pred             HHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHH
Q psy11734        531 YYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLII  610 (817)
Q Consensus       531 ~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~  610 (817)
                                                               +  .                 .+++++.+|+|+++...+
T Consensus       194 -----------------------------------------~--~-----------------~~~~~~~~~~~~~~~~~~  213 (385)
T TIGR00710       194 -----------------------------------------T--Y-----------------FETFLLLLKSKMFWGYAL  213 (385)
T ss_pred             -----------------------------------------H--H-----------------HHHHHHHHcCchhHHHHH
Confidence                                                     0  0                 012345677888888777


Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHH
Q psy11734        611 SEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPG  690 (817)
Q Consensus       611 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~  690 (817)
                      ...+.....+....+.|.++++++|.++.+.+.+.....++.+++.++.|++.||+++|+.+          ..+..+..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~----------~~~~~~~~  283 (385)
T TIGR00710       214 IYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLL----------RMGLILFA  283 (385)
T ss_pred             HHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH----------HHHHHHHH
Confidence            77777778888888999999988999999999999999999999999999999999987643          23333333


Q ss_pred             HHHHHHHhhc--C-ch-HHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcC
Q psy11734        691 VGALAASYVG--C-NT-SMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  764 (817)
Q Consensus       691 ~~~~~~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~  764 (817)
                      ++.+++....  . +. ........+.+++.+...+.......|..|++++++.++.+...+.++.+.+.+.+...+.
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~  361 (385)
T TIGR00710       284 VSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGN  361 (385)
T ss_pred             HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            3333332221  1 12 2223333444455555566666667777788899999999999888666666666754443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.88  E-value=4.3e-21  Score=212.07  Aligned_cols=367  Identities=17%  Similarity=0.109  Sum_probs=244.7

Q ss_pred             HHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH
Q psy11734        212 EVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV  291 (817)
Q Consensus       212 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~  291 (817)
                      +++.......+....|. +++.+|.|..+.+++.....++..++.++.|+++||+|||+.          +..+..+..+
T Consensus         4 ~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------~~~~~~~~~~   72 (379)
T TIGR00881         4 YAAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVF----------LPIGLILCAI   72 (379)
T ss_pred             hhHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeeh----------hHHHHHHHHH
Confidence            44555566666666775 455589999999999999999999999999999999999986          6777777777


Q ss_pred             HHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccc-ccceecccccccC
Q psy11734        292 GALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPL-TVGFLTQNIISIN  369 (817)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~-i~g~l~~~~~~~~  369 (817)
                      +.+.....+ +.+...+...+.+.+.+...+.......+..| ++|+++.++.+....+|..++|. +.+.+.+.     
T Consensus        73 ~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----  146 (379)
T TIGR00881        73 VNLFFGFST-SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-----  146 (379)
T ss_pred             HHHHHHHhh-hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-----
Confidence            766666654 55555555555566666666777777777666 68999999999999999999985 44333322     


Q ss_pred             CCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchh
Q psy11734        370 PIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPAR  449 (817)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (817)
                                                              .+|+..|++.+++.++..++..++.+++++....+..+  
T Consensus       147 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  184 (379)
T TIGR00881       147 ----------------------------------------YSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAE--  184 (379)
T ss_pred             ----------------------------------------CCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccc--
Confidence                                                    16899999888777766555555444433221110000  


Q ss_pred             HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHH
Q psy11734        450 YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSA  529 (817)
Q Consensus       450 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~  529 (817)
                                                   +         .++.+.           +++.+..+++.             
T Consensus       185 -----------------------------~---------~~~~~~-----------~~~~~~~~~~~-------------  202 (379)
T TIGR00881       185 -----------------------------E---------MPNEEP-----------DGDAEKKEEEL-------------  202 (379)
T ss_pred             -----------------------------c---------Cccccc-----------ccccccccccc-------------
Confidence                                         0         000000           00000000000             


Q ss_pred             HHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHH
Q psy11734        530 FYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLI  609 (817)
Q Consensus       530 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~  609 (817)
                                           +                    .                   .+...++++++|.+|...
T Consensus       203 ---------------------~--------------------~-------------------~~~~~~~~~~~~~~~~~~  222 (379)
T TIGR00881       203 ---------------------T--------------------K-------------------KQIFLQYVLLNKVLWYIS  222 (379)
T ss_pred             ---------------------c--------------------c-------------------hHHHHHHHHhcchHHHHH
Confidence                                 0                    0                   011235677889999998


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHH
Q psy11734        610 ISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLP  689 (817)
Q Consensus       610 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~  689 (817)
                      +..++.......+..+.|.|+++.+|+++.+.+...+...+++++++++.|++.||..+++.       ...........
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-------~~~~~~~~~~~  295 (379)
T TIGR00881       223 LGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRR-------GPLAVFFMALI  295 (379)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc-------hHHHHHHHHHH
Confidence            88888888999999999999999899999999999999999999999999999999754432       11111222222


Q ss_pred             HHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCc
Q psy11734        690 GVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT  766 (817)
Q Consensus       690 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g  766 (817)
                      .+++....... .+...........+.+.....+.......|..| ++|+++.|+.+...++++.++|.+.|.+.|+.|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g  374 (379)
T TIGR00881       296 IVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG  374 (379)
T ss_pred             HHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence            22222222211 122222233333333333333444456677777 789999999999999999999999999999875

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.88  E-value=5.4e-23  Score=235.81  Aligned_cols=310  Identities=17%  Similarity=0.145  Sum_probs=215.5

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...|...+++.|++|+|+|+++++++.....+|..+||.+++++.+ +.|||+.|++.+++.++..++.+
T Consensus        96 ~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~w~~~f~~~~~~~~~~~~~~~  174 (485)
T TIGR00711        96 FRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE-NYHWRWIFLINVPIGIIVVVVAF  174 (485)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-CcCceehhhhhhHHHHHHHHHHH
Confidence            38899999999999999999999999999999999999999999999999999999 99999999999988888777777


Q ss_pred             heeccCCCCCC-CCCHHHHhHhhhhccc--cccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHH
Q psy11734         81 ILCFNDPKSHP-YISEKERKYLLDSIGA--AERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLG  157 (817)
Q Consensus        81 ~~~~~~p~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (817)
                      +..|++++.++ ..+..+..........  ....+.++.+|.+                             .+.+....
T Consensus       175 ~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~  225 (485)
T TIGR00711       175 FILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFD-----------------------------SNEILILS  225 (485)
T ss_pred             HHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCC-----------------------------chHHHHHH
Confidence            76665433221 1111111000000000  0000111122221                             11111111


Q ss_pred             HHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCc
Q psy11734        158 FLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLS  237 (817)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s  237 (817)
                      .........+                ..++.+++.+....+++|+|+++...+..++.+...++..+++|.|+++.+|++
T Consensus       226 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s  289 (485)
T TIGR00711       226 ITGLVAIIAF----------------VVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYT  289 (485)
T ss_pred             HHHHHHHHHH----------------HHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            1111111111                111112222223357899999999999999999999999999999999999999


Q ss_pred             ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc-c-CC-ChhHHHHHHHHHH
Q psy11734        238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY-V-GC-NTSMVAIFFTIGM  314 (817)
Q Consensus       238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~l~~  314 (817)
                      +.++|+...+..++..+++++.|++.||+++|+.          ...+..+..++...+.. . ++ +.........+.+
T Consensus       290 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g  359 (485)
T TIGR00711       290 ALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL----------VTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRG  359 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH----------HHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999998875          56666666666665542 2 21 2333333344444


Q ss_pred             HHhhhccccc-cccccccCCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        315 AFMGFCYASI-RVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       315 ~~~g~~~~~~-~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      .+.+...+.. .....+.+++++++++|+.++.+++|+++|+.+.+.+.++..
T Consensus       360 ~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~~  412 (485)
T TIGR00711       360 FGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNRT  412 (485)
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4454444333 444455666899999999999999999999999999998653

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK10133 L-fucose transporter; Provisional

Probab=99.88  E-value=8.8e-21  Score=213.23  Aligned_cols=288  Identities=17%  Similarity=0.184  Sum_probs=225.8

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHH
Q psy11734        448 ARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVIL  527 (817)
Q Consensus       448 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~  527 (817)
                      ....-++..++.++.-.+++...+...|.+.+                                   ++|+|+.+.|++.
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~-----------------------------------~~~~s~~~~gl~~   67 (438)
T PRK10133         23 SYIIPFALLCSLFFLWAVANNLNDILLPQFQQ-----------------------------------AFTLTNFQAGLIQ   67 (438)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCCHHHHHHHH
Confidence            34445567778888888899999998888877                                   9999999999999


Q ss_pred             HHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHH---HHhhhcchHHHHHHHHHHhhhcc-------------
Q psy11734        528 SAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLT---PLIAHSGPVSMTVLRFLEGVGED-------------  591 (817)
Q Consensus       528 s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~---~~a~~~s~~~l~~~R~l~Gig~~-------------  591 (817)
                      +.+.+++.+++++.|++.||+|||+++..++++++++++++   .+++  +++.++++|+++|+|.+             
T Consensus        68 ~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~--~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~  145 (438)
T PRK10133         68 SAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM--NYTLFLVGLFIIAAGLGCLETAANPFVTVL  145 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence            99999999999999999999999999999999999999886   4577  99999999999999988             


Q ss_pred             -------------------------------c-Cc------------------hh-------------------------
Q psy11734        592 -------------------------------L-ET------------------PW-------------------------  596 (817)
Q Consensus       592 -------------------------------~-~~------------------~~-------------------------  596 (817)
                                                     . ..                  .+                         
T Consensus       146 ~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~  225 (438)
T PRK10133        146 GPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALL  225 (438)
T ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                           0 00                  00                         


Q ss_pred             --------------------------HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHhCCChhHHHHHHHHHH
Q psy11734        597 --------------------------AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYM-SQVIGLSVAENGVLSALPF  649 (817)
Q Consensus       597 --------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l-~~~~g~s~~~~~~~~~~~~  649 (817)
                                                ++++++|+++...+..++.....++...|.|.|+ ++.+|+++.+++.......
T Consensus       226 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~  305 (438)
T PRK10133        226 IMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTM  305 (438)
T ss_pred             HHHhcCCCCCccccccccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHH
Confidence                                      0122344556666667777788888888999996 5678999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhcc
Q psy11734        650 LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPI  729 (817)
Q Consensus       650 ~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (817)
                      +++++|++.++++.||+++|+++          ..+..+..+.+++....+ +. .....+.+.+++.+..+|..++...
T Consensus       306 ~~~~vG~~~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~-~~-~~~~~~~l~glg~~~i~P~~~s~a~  373 (438)
T PRK10133        306 VCFFIGRFTGTWLISRFAPHKVL----------AAYALIAMALCLISAFAG-GH-VGLIALTLCSAFMSIQYPTIFSLGI  373 (438)
T ss_pred             HHHHHHHHHHHHHHHHcCHHHHH----------HHHHHHHHHHHHHHHHcC-Ch-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999987653          244444444444443433 32 3345566678888888999998888


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHH
Q psy11734        730 DLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVF  787 (817)
Q Consensus       730 ~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~  787 (817)
                      +..|++.+++.++.. ...+++.++|.+.|.+.|..|  +.+..|++...+.+.....
T Consensus       374 ~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g--~~~~~~~v~~~~~~~~~~~  428 (438)
T PRK10133        374 KNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAG--NIPTAELIPALCFAVIFIF  428 (438)
T ss_pred             cccchhhccchhHHh-HHhccchHHHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHH
Confidence            888888888888886 456789999999999999864  2456666555544444333

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.87  E-value=1.8e-20  Score=208.74  Aligned_cols=369  Identities=12%  Similarity=0.103  Sum_probs=250.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHH
Q psy11734        206 WSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLG  285 (817)
Q Consensus       206 ~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~  285 (817)
                      +...+..++...+.+.+..++|.|+++++|.|+.+.|+...+..+...+.++++|+++||+++|+.          +..+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~----------l~~~   82 (400)
T PRK11646         13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM----------IVTG   82 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH----------HHHH
Confidence            455677777888888889999999998899999999999999999999999999999999999886          6777


Q ss_pred             hHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734        286 AVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  364 (817)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~  364 (817)
                      ..+..++++.....+ +.+...+...+.+.+.+...+.......+.. +++|++++|+.+...++|..+||.+.+.+. .
T Consensus        83 ~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~  160 (400)
T PRK11646         83 MLMRAAGFATMAIAH-EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q  160 (400)
T ss_pred             HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence            777777776665544 5554455455555555555555555556654 589999999999999999999999998876 3


Q ss_pred             ccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCC
Q psy11734        365 IISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNES  444 (817)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (817)
                      .                                             +|+..|++.++..++..++..+..+++++    +
T Consensus       161 ~---------------------------------------------g~~~~f~~~~~~~~~~~i~~~~~~~~~~~----~  191 (400)
T PRK11646        161 Y---------------------------------------------DFRLVCATGAVLFVLAAAFNAWLLPAYKL----S  191 (400)
T ss_pred             h---------------------------------------------hHHHHHHHHHHHHHHHHHHHHHhCCcccc----c
Confidence            2                                             69999998887766655443332221100    0


Q ss_pred             CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734        445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG  524 (817)
Q Consensus       445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g  524 (817)
                        +                               +                                 .++.        
T Consensus       192 --~-------------------------------~---------------------------------~~~~--------  197 (400)
T PRK11646        192 --T-------------------------------V---------------------------------RTPV--------  197 (400)
T ss_pred             --c-------------------------------c---------------------------------chhh--------
Confidence              0                               0                                 0000        


Q ss_pred             HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHh
Q psy11734        525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLP  604 (817)
Q Consensus       525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~  604 (817)
                                                                                          .+++++.+++|+
T Consensus       198 --------------------------------------------------------------------~~~~~~~~~~~~  209 (400)
T PRK11646        198 --------------------------------------------------------------------REGMTRVLRDKR  209 (400)
T ss_pred             --------------------------------------------------------------------HHHHHHHHcCch
Confidence                                                                                012345567777


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcccccccchhhHHHHH
Q psy11734        605 VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADY-LIVRDILSRTNVRKVFAT  683 (817)
Q Consensus       605 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~g~~~~~~~~~~r~~~~~  683 (817)
                      ++......+...........+.|.|+++..+ ++.+.+.+.+...+....+....+++.|| ++.++.          ..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~----------~~  278 (400)
T PRK11646        210 FVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHR----------LM  278 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH----------HH
Confidence            6665555544444444456789999988655 67788888777777666666555666654 433321          13


Q ss_pred             HHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhh
Q psy11734        684 LGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT  762 (817)
Q Consensus       684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~  762 (817)
                      .++.+..+..+++...+ +.+.......+.+.+.+...+...+...+..| +++|++.|+.+...++|+.++|.+.|.+.
T Consensus       279 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~  357 (400)
T PRK11646        279 AGLLIMSLSMFPIGMVS-NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLF  357 (400)
T ss_pred             HHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHH
Confidence            45555555555555443 34333333344444445555666677777777 88999999999999999999999999999


Q ss_pred             cCCcccc-HHHHHHHHHHHHHHHHHHHH
Q psy11734        763 QNKTLLE-WRVVFWIMFLTLFISNVFFV  789 (817)
Q Consensus       763 ~~~g~~~-~~~~~~~~~~~~~i~~~~~~  789 (817)
                      |+.+..+ ....++..+.+.+++.+...
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (400)
T PRK11646        358 DLGKALNQPELPWMMLGIIGLITLLALY  385 (400)
T ss_pred             HHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence            9863212 34555555555555554433

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.87  E-value=2.6e-20  Score=203.34  Aligned_cols=345  Identities=23%  Similarity=0.326  Sum_probs=276.4

Q ss_pred             HHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHh
Q psy11734        207 SLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGA  286 (817)
Q Consensus       207 ~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~  286 (817)
                      ......++.....+......|.+.++ +|.+..+.+.......++..++.++.|+++||+|||+.          +..+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~----------~~~~~   71 (352)
T cd06174           3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRV----------LLLGL   71 (352)
T ss_pred             HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchh----------hHHHH
Confidence            44556667777788888888988877 69999999999999999999999999999999999986          77777


Q ss_pred             HHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        287 VLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      .+..++.......+ +.........+.+.+.+...+.......|..| |+|++++++.+....+|..++|.+.+.+.+..
T Consensus        72 ~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  150 (352)
T cd06174          72 LLFALGSLLLAFAS-SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL  150 (352)
T ss_pred             HHHHHHHHHHHHhc-cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            77777766665553 55555555555566666666667777778776 69999999999999999999999998877653


Q ss_pred             cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734        366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI  445 (817)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (817)
                                                                   +|+..|++.++..+++.+...++.           
T Consensus       151 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~-----------  174 (352)
T cd06174         151 ---------------------------------------------GWRWLFLILAILGLLLALLLLFLL-----------  174 (352)
T ss_pred             ---------------------------------------------hHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence                                                         588888887777666555443321           


Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (352)
T cd06174         175 --------------------------------------------------------------------------------  174 (352)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhH
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPV  605 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~  605 (817)
                                                                                                   |++
T Consensus       175 -----------------------------------------------------------------------------~~~  177 (352)
T cd06174         175 -----------------------------------------------------------------------------RLL  177 (352)
T ss_pred             -----------------------------------------------------------------------------HHH
Confidence                                                                                         345


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-ccccchhhHHHHHH
Q psy11734        606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRD-ILSRTNVRKVFATL  684 (817)
Q Consensus       606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~-~~~~~~~r~~~~~~  684 (817)
                      +......++..........+.|.++++..|.+..+.+.......++..++.+..+++.||+++|+ .+          ..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------~~  247 (352)
T cd06174         178 LLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLL----------LI  247 (352)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH----------HH
Confidence            55666677777788888899999999988999999999999999999999999999999999886 43          46


Q ss_pred             HHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734        685 GAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  763 (817)
Q Consensus       685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~  763 (817)
                      +..+..++.+.....+ +.+.......+.+.+.+...+.......|..| ++|++.+|+.+...++++.++|.+.|.+.|
T Consensus       248 ~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~  326 (352)
T cd06174         248 GLLLAALGLLLLALAP-SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD  326 (352)
T ss_pred             HHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            6666666666666654 45556666666777777777878888888888 889999999999999999999999999998


Q ss_pred             CCccccHHHHHHHHHHHHHHHHHHHHH
Q psy11734        764 NKTLLEWRVVFWIMFLTLFISNVFFVL  790 (817)
Q Consensus       764 ~~g~~~~~~~~~~~~~~~~i~~~~~~~  790 (817)
                      ..+   |+..+.+.+++.+++.+..++
T Consensus       327 ~~~---~~~~~~~~~~~~~i~~i~~~~  350 (352)
T cd06174         327 TGG---YGGVFLILAALALLAALLLLL  350 (352)
T ss_pred             ccC---cchHHHHHHHHHHHHHHHhee
Confidence            754   788898888888887766543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.87  E-value=4e-22  Score=225.95  Aligned_cols=311  Identities=15%  Similarity=0.149  Sum_probs=207.6

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHH-HhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVL-ATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~i-g~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      |+++|++.|..+|...+.+.|++|+|+|+++++++..+..+|..+ +|.++..+.. ..|||+.|++.+++.++..++.+
T Consensus       127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~-~~gw~~~f~i~~~~~~~~~~l~~  205 (452)
T PRK11273        127 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW-FNDWHAALYMPAFAAILVALFAF  205 (452)
T ss_pred             HHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHH
Confidence            788999999999988899999999999999999999999998754 5544444444 56999999999988888777777


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +++||+|++.+..++++.++...  ...+..++++                                             
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------------------------------------------  238 (452)
T PRK11273        206 AMMRDTPQSCGLPPIEEYKNDYP--DDYNEKHEQE---------------------------------------------  238 (452)
T ss_pred             HHccCCHhhcCCCChhhhhhccc--cccccccCCC---------------------------------------------
Confidence            77888776543222211100000  0000000000                                             


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCch-HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP-WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                                                   ++.++. ...++|||.+|...+..++.+...++...|+|.|+++.+|++..
T Consensus       239 -----------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~  289 (452)
T PRK11273        239 -----------------------------LTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALD  289 (452)
T ss_pred             -----------------------------ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence                                         000111 23478899999999999998888899999999999998899999


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC-CChhHHHHHHHHHHHHhh
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAIFFTIGMAFMG  318 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g  318 (817)
                      +++.+..+..++.+++.++.|+++||+++++.       +........+..++...+.... .+.......+...+....
T Consensus       290 ~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  362 (452)
T PRK11273        290 KSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR-------GATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIY  362 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc-------chHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHH
Confidence            99998889999999999999999999954331       0012222222222222222221 122222222222222111


Q ss_pred             hccccccccccccC-CCchhHHHHHHHhhhhhcccc-cccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734        319 FCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMV-APLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA  396 (817)
Q Consensus       319 ~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~-~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (817)
                      ...........|.. ++++|+++|+.+...++|+++ +|.+.|.+.|..                               
T Consensus       363 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-------------------------------  411 (452)
T PRK11273        363 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-------------------------------  411 (452)
T ss_pred             hHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-------------------------------
Confidence            11111223344544 479999999999999998765 799999998875                               


Q ss_pred             cccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccc
Q psy11734        397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYW  441 (817)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~  441 (817)
                                    +|+..|++.+++.+++.+....+.+.|++++
T Consensus       412 --------------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  442 (452)
T PRK11273        412 --------------GWDGGFMVMIGGSILAVILLIVVMIGEKRHH  442 (452)
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence                          5899999998888888777666655554443

>PRK12382 putative transporter; Provisional

Probab=99.87  E-value=8.9e-20  Score=203.10  Aligned_cols=367  Identities=13%  Similarity=0.091  Sum_probs=236.1

Q ss_pred             hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734        201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV  280 (817)
Q Consensus       201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~  280 (817)
                      .|+.++...+..++...........+|.++++.+|.|+.+.|+..+...++..+++++.|+++||+|||+.         
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~---------   83 (392)
T PRK12382         13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRS---------   83 (392)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHH---------
Confidence            34556667777777777777777889989888899999999999999999999999999999999999986         


Q ss_pred             HHHHHhHHHHHHHH---hhhccC----CChhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhccc
Q psy11734        281 FATLGAVLPGVGAL---AASYVG----CNTSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGM  352 (817)
Q Consensus       281 ~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~  352 (817)
                       +..+.+...++..   .....+    ++.....+.-.+.+.+.+...+.......+ .++|+|++++++.+.....|..
T Consensus        84 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~  162 (392)
T PRK12382         84 -ALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALA  162 (392)
T ss_pred             -HHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHH
Confidence             5555444433322   111111    122333333334444444444444444445 4458999999999998889999


Q ss_pred             ccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhee
Q psy11734        353 VAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVL  432 (817)
Q Consensus       353 ~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~  432 (817)
                      ++|.+.+.+.+..                                             +|+..+.+..+..++....   
T Consensus       163 ~g~~~~~~l~~~~---------------------------------------------g~~~~~~~~~~~~~~~~~~---  194 (392)
T PRK12382        163 AGAPLGLLLHSHF---------------------------------------------GFAALALTTMVLPLLAWAF---  194 (392)
T ss_pred             HHHHHHHHHHhcc---------------------------------------------ChHHHHHHHHHHHHHHHHH---
Confidence            9999988776543                                             5777666554443322221   


Q ss_pred             ecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccc
Q psy11734        433 FGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTL  512 (817)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (817)
                      . ++.++..+++                                  +                           + .+  
T Consensus       195 ~-~~~~~~~~~~----------------------------------~---------------------------~-~~--  209 (392)
T PRK12382        195 N-GTVRKVPAHA----------------------------------G---------------------------E-RP--  209 (392)
T ss_pred             H-HhccCCCCCc----------------------------------c---------------------------c-Cc--
Confidence            1 1111100000                                  0                           0 00  


Q ss_pred             cccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhccc
Q psy11734        513 DAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDL  592 (817)
Q Consensus       513 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~  592 (817)
                        ++    .+.  .                        |                                         
T Consensus       210 --~~----~~~--~------------------------~-----------------------------------------  216 (392)
T PRK12382        210 --SL----WSV--V------------------------G-----------------------------------------  216 (392)
T ss_pred             --hH----HHH--H------------------------H-----------------------------------------
Confidence              00    000  0                        0                                         


Q ss_pred             CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy11734        593 ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDIL  672 (817)
Q Consensus       593 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~  672 (817)
                           ... .+.     ....+..........+.|.|+++ .|.+.  .+.......++.+++++..|++.||+++|+.+
T Consensus       217 -----~~~-~~~-----~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~  282 (392)
T PRK12382        217 -----LIW-KPG-----LGLALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA  282 (392)
T ss_pred             -----HHH-HhH-----HHHHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh
Confidence                 000 000     01111223344455677788876 46553  45556667788899999999999999998764


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHH
Q psy11734        673 SRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSG  751 (817)
Q Consensus       673 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~  751 (817)
                                ..+..+..++.+++...+ +.+.......+.+.+.+...+.......+..| ++||++.|+.+...++++
T Consensus       283 ----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  351 (392)
T PRK12382        283 ----------IVSLLVETVGLLLLWLAP-TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAY  351 (392)
T ss_pred             ----------HHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence                      245555555555554443 44444444555555555555655555566665 889999999999999999


Q ss_pred             hHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        752 MVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       752 ~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      .++|.+.|.+.|+.|   |+..|...+.+.+++.+..+..
T Consensus       352 ~ig~~~~g~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~  388 (392)
T PRK12382        352 GVSGPLAGMLATSFG---YPSVFLAGAISAVLGIIVTILS  388 (392)
T ss_pred             HHHHHHHHHHHHHhC---chHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999875   8899999998888887776655

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.87  E-value=7.6e-22  Score=222.81  Aligned_cols=307  Identities=15%  Similarity=0.192  Sum_probs=210.5

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|++.|..++.....+.|++|+|||++++++++.+..+|..+++++.+...+...|||+.|++.+++.++..+..++
T Consensus       125 ~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~  204 (438)
T TIGR00712       125 LFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFA  204 (438)
T ss_pred             HHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999999999999887765441579999999999888887777777


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      ++||+|++++..+.++.+.   +... +..++.+.++                                           
T Consensus       205 ~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~-------------------------------------------  237 (438)
T TIGR00712       205 MMRDTPQSCGLPPIEEYRN---DYPD-DYNEKAEQEL-------------------------------------------  237 (438)
T ss_pred             hccCCHHhcCCCCchhccc---cccc-cccccccccc-------------------------------------------
Confidence            7787765432111110000   0000 0000000000                                           


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCch-HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP-WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                   +.++. ...++|||.+|...+..++.....+++.+|+|.|+++.+|+|+.+
T Consensus       238 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  288 (438)
T TIGR00712       238 -----------------------------TAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDK  288 (438)
T ss_pred             -----------------------------chHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhh
Confidence                                         00111 235789999999988888888888999999999999988999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC-CChhHHHHHHHHHHHHhhh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g~  319 (817)
                      ++++..+..+++.++++++|+++||+++++..       ...........++...+...+ .+.......+...++.  .
T Consensus       289 ~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~  359 (438)
T TIGR00712       289 SSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG-------ATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFL--I  359 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-------HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH--H
Confidence            99999999999999999999999999765421       011111111112222221111 1222222222221211  1


Q ss_pred             ccccc--cccccccCC-CchhHHHHHHHhhhhhcc-cccccccceecccccccCCCCCCCCCccchhhcccCcccccccc
Q psy11734        320 CYASI--RVNPIDLSP-NFSGTIMALSNGLGCVSG-MVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMV  395 (817)
Q Consensus       320 ~~~~~--~~~~~~~~p-~~~g~a~g~~~~~~~lg~-~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (817)
                      ..+..  .....+..| ++||+++|+.+..+++|+ +++|.+.|.+.|+.                              
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~------------------------------  409 (438)
T TIGR00712       360 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF------------------------------  409 (438)
T ss_pred             ccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc------------------------------
Confidence            11111  223445555 799999999999999875 68999999998875                              


Q ss_pred             ccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        396 APLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                                     +|+..|++.+++.+++.+..+++.++|+
T Consensus       410 ---------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (438)
T TIGR00712       410 ---------------GWDGGFMVMIGGSILAVILLIVVMIGEK  437 (438)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence                           5888999988888888888888777765

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.87  E-value=9.5e-20  Score=201.70  Aligned_cols=361  Identities=14%  Similarity=0.209  Sum_probs=238.3

Q ss_pred             HHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhh
Q psy11734        218 GLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAAS  297 (817)
Q Consensus       218 ~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (817)
                      +.......+|.+.++ +|.|..+.++......++..+++++.|+++||+|||+.          +..+..+..++...+.
T Consensus         6 ~~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~----------~~~~~~~~~i~~~~~~   74 (377)
T PRK11102          6 AIDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV----------ILGGTLVFALAAVACA   74 (377)
T ss_pred             HHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH----------HHHHHHHHHHHHHHHH
Confidence            344455667777776 79999999999999999999999999999999999885          6677777777666665


Q ss_pred             ccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCC
Q psy11734        298 YVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPN  376 (817)
Q Consensus       298 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~  376 (817)
                      ..+ +.........+.+.+.+...+.......+..| ++|++++++.+....+|..++|.+.+.+.+..           
T Consensus        75 ~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----------  142 (377)
T PRK11102         75 LAQ-TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-----------  142 (377)
T ss_pred             HHc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------
Confidence            554 44444444445455555555555666666655 78999999999999999999999988776653           


Q ss_pred             CccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHH
Q psy11734        377 FSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMG  456 (817)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~  456 (817)
                                                        +|+..|++.+.+.++..++..++.++++++.+++            
T Consensus       143 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  176 (377)
T PRK11102        143 ----------------------------------SWHAIFWVLALAAILAAALVFFFIPETLPKERRQ------------  176 (377)
T ss_pred             ----------------------------------ChHHHHHHHHHHHHHHHHHHHHhCCccCcccccC------------
Confidence                                              6999999888877766555443333321110000            


Q ss_pred             HHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHH
Q psy11734        457 CMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYIL  536 (817)
Q Consensus       457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i  536 (817)
                                                                                +.+                   
T Consensus       177 ----------------------------------------------------------~~~-------------------  179 (377)
T PRK11102        177 ----------------------------------------------------------PFH-------------------  179 (377)
T ss_pred             ----------------------------------------------------------CCC-------------------
Confidence                                                                      000                   


Q ss_pred             hhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHH
Q psy11734        537 THIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHD  616 (817)
Q Consensus       537 ~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~  616 (817)
                                   .|.                   .                    ..++++.+++|+.+...+..++..
T Consensus       180 -------------~~~-------------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~  207 (377)
T PRK11102        180 -------------LRT-------------------T--------------------IRNFASLFRHKRVLGYMLASGFSF  207 (377)
T ss_pred             -------------hHH-------------------H--------------------HHHHHHHHcChHHHHHHHHHHHHH
Confidence                         000                   0                    012356677888877777777777


Q ss_pred             HHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHH---HHHH
Q psy11734        617 YGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLP---GVGA  693 (817)
Q Consensus       617 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~---~~~~  693 (817)
                      ...+.+..+.|.++.+.+|+++.+.+.......++.++++++.|++.||+|+|+.+          ..+..+.   .+.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~  277 (377)
T PRK11102        208 AGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNML----------RFGLWIQFIMGIWL  277 (377)
T ss_pred             HHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHHHHHH
Confidence            77888888899999988899999999999999999999999999999999988653          2333222   2222


Q ss_pred             HHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHH-HHHhHHHHHHHHhhcCCccccHHH
Q psy11734        694 LAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGC-VSGMVAPLTVGFLTQNKTLLEWRV  772 (817)
Q Consensus       694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~i~p~~~g~~~~~~g~~~~~~  772 (817)
                      ......+.+.+.......+.....+...+.......|..|++++++.++.+.... +++.+++.+.+. .+.    .+..
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~-~~~----~~~~  352 (377)
T PRK11102        278 VVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLA-PFT----SAWP  352 (377)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHhc-cCC----ChHH
Confidence            2222222223333333333333333333444455667778999999999887765 456666655432 222    1333


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q psy11734        773 VFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       773 ~~~~~~~~~~i~~~~~~~~  791 (817)
                      .+...+++.+++.+..++.
T Consensus       353 ~~~~~~~~~~~~~~~~~~~  371 (377)
T PRK11102        353 MVWSMAFCSILSILFYLYA  371 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            4444455555555444444

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.87  E-value=4e-20  Score=206.11  Aligned_cols=380  Identities=11%  Similarity=0.048  Sum_probs=249.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734        202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF  281 (817)
Q Consensus       202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~  281 (817)
                      ||.+|......++...++..+..++|.|+++.+|.|+.+.|.+.....++..++++..|+++||+|||+.          
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~----------   70 (396)
T TIGR00882         1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKH----------   70 (396)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH----------
Confidence            6789999999999999999999999999999899999999999999999999999999999999999985          


Q ss_pred             HHHHhHHHHHHHH---hhhccCC---Chh-HHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhccccc
Q psy11734        282 ATLGAVLPGVGAL---AASYVGC---NTS-MVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVA  354 (817)
Q Consensus       282 ~~~~~~~~~~~~~---~~~~~~~---~~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~  354 (817)
                      ...+.....+...   .....+.   +.. ...+.....+.+.+...+.......+..+ +++...|.......+|.+++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~g  149 (396)
T TIGR00882        71 LLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR-NSNFEYGKARMFGCVGWALC  149 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh-hcccccchhhhhcccHHHHH
Confidence            3333222222211   1111110   011 11111112222333333333434334323 33456778888888999999


Q ss_pred             ccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734        355 PLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG  434 (817)
Q Consensus       355 ~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~  434 (817)
                      |.+.|.+.+.                                              +|+..|++.+++.++..++..+..
T Consensus       150 ~~~~g~l~~~----------------------------------------------~~~~~f~~~~~~~~~~~~~~~~~~  183 (396)
T TIGR00882       150 ASIAGILFSI----------------------------------------------DPQIVFWLGSGFALILMLLLMFAK  183 (396)
T ss_pred             HHHHhhhhcc----------------------------------------------CchHHHHHHHHHHHHHHHHHHHhC
Confidence            9998876542                                              588999988887776665544433


Q ss_pred             ccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccc
Q psy11734        435 SGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDA  514 (817)
Q Consensus       435 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (817)
                      ++.+++.+++ .+                             ..+                           +   +   
T Consensus       184 ~~~~~~~~~~-~~-----------------------------~~~---------------------------~---~---  200 (396)
T TIGR00882       184 PKAPSSATVA-NA-----------------------------LGA---------------------------N---A---  200 (396)
T ss_pred             CCCchhhhhh-cc-----------------------------ccc---------------------------c---c---
Confidence            2221110000 00                             000                           0   0   


Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCc
Q psy11734        515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLET  594 (817)
Q Consensus       515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~  594 (817)
                      +-+                                                                          +.+
T Consensus       201 ~~~--------------------------------------------------------------------------~~~  206 (396)
T TIGR00882       201 SAF--------------------------------------------------------------------------SLK  206 (396)
T ss_pred             CCC--------------------------------------------------------------------------CHH
Confidence            000                                                                          001


Q ss_pred             hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q psy11734        595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI---GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDI  671 (817)
Q Consensus       595 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~  671 (817)
                      +.++++|+|+++...+..++....+.....+.|.|+++..   +.+....+...+...+...++.+..|++.||+++|+.
T Consensus       207 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~  286 (396)
T TIGR00882       207 LALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA  286 (396)
T ss_pred             HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence            3456788888887777766666666667778899988865   4566678888888889999999999999999999875


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHH-HHHHHHH
Q psy11734        672 LSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMAL-SNGLGCV  749 (817)
Q Consensus       672 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~-~~~~~~~  749 (817)
                      +          ..+..+.++...+..... +++.......+.+.+.............+..+ +.++++.+. .+....+
T Consensus       287 l----------~~~~~l~~l~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l  355 (396)
T TIGR00882       287 L----------LIAGTIMSVRIIGSSFAT-TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL  355 (396)
T ss_pred             H----------HHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH
Confidence            4          355555555555544433 55555444444444433333333334445444 667776665 5788899


Q ss_pred             HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHH
Q psy11734        750 SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFV  789 (817)
Q Consensus       750 g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~  789 (817)
                      |+.++|.+.|++.|..|   |+..|.+.+++.++..+...
T Consensus       356 g~~~~~~l~G~l~~~~G---~~~~f~~~~~~~~i~~~~~~  392 (396)
T TIGR00882       356 AMIFLSTLAGNMYDSIG---FQGAYLVLGCIVLLFTLISV  392 (396)
T ss_pred             HHHHHHHhHHHHHHhcc---cHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999876   88999998888887766544

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.86  E-value=2.2e-21  Score=222.13  Aligned_cols=269  Identities=15%  Similarity=0.195  Sum_probs=174.8

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc--------ccccCcchhHHHHhhhH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM--------SFTASWANVFYIFGAIA   72 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~--------~~~~gWr~~f~i~~~~~   72 (817)
                      +|++||+|.|+.+|.+.++++||+|+|+||++.++...+..+|..+|+.+...+.        + .+|||++|++.++++
T Consensus       124 ~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~-~~gWR~~f~i~~~~~  202 (490)
T PRK10642        124 CKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFL-DWGWRIPFFIALPLG  202 (490)
T ss_pred             HHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhc-CccHHHHHHHHHHHH
Confidence            4999999999999999999999999999999999999888888888886655432        3 579999999987665


Q ss_pred             HHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCcc
Q psy11734         73 VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKH  152 (817)
Q Consensus        73 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (817)
                      ++.. +....+||+|+   +...+++.  .+.  .    ++.   .                                  
T Consensus       203 l~~~-~~~~~~~esp~---~~~~~~~~--~~~--~----~~~---~----------------------------------  233 (490)
T PRK10642        203 IIGL-YLRHALEETPA---FQQHVDKL--EQG--D----REG---L----------------------------------  233 (490)
T ss_pred             HHHH-HHHHcCCCChh---HHHHHHhh--hhh--c----ccc---c----------------------------------
Confidence            5433 33334444432   11111100  000  0    000   0                                  


Q ss_pred             chhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhc-hh-HHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734        153 TLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYS-LP-VWSLIISEVGHDYGLYLISTDLPKYM  230 (817)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~i~~~~~~~~~~~~~~~~p~~l  230 (817)
                                                          .++++.++++++++ +. ........++....+|++..|+|.|+
T Consensus       234 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l  277 (490)
T PRK10642        234 ------------------------------------QDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYL  277 (490)
T ss_pred             ------------------------------------cccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                00013346666653 22 33333344556678889999999999


Q ss_pred             HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHH-HHHHhhhc-cCCChhHHHH
Q psy11734        231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPG-VGALAASY-VGCNTSMVAI  308 (817)
Q Consensus       231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~  308 (817)
                      ++.+|++..++++......++..++.++.|+++||+|||+.          +..+..+.. .+...+.. ..++......
T Consensus       278 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (490)
T PRK10642        278 SHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPF----------VILGSVALFVLAIPAFILINSNVIGLIFA  347 (490)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence            88889998888888888889999999999999999999875          444433222 22221211 1222333333


Q ss_pred             HHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ...+.+++.+...+.......+..| +.|+++.|+.+.+..+++.++|.+.+.+.+..
T Consensus       348 ~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~  405 (490)
T PRK10642        348 GLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST  405 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3333333333333334444445555 78999999877777778889999999887654

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.86  E-value=9.8e-20  Score=201.81  Aligned_cols=368  Identities=13%  Similarity=0.038  Sum_probs=258.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHH
Q psy11734        206 WSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLG  285 (817)
Q Consensus       206 ~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~  285 (817)
                      +...+.+++...+......++|.|+++ +|.|..+.|+......+...+++++.|+++||.+|+..     .++.... +
T Consensus         7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~-~   79 (382)
T TIGR00902         7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIII-----ALRLLAL-A   79 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH-----HHHHHHH-H
Confidence            445566666666666677889999987 69999999999999999999999999999999987542     1111111 1


Q ss_pred             hHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        286 AVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ..+...   .+....++.+...+...+.+.+.....+.......+ .++++++++|.......+|.+++|.+.|.+.++.
T Consensus        80 ~~l~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~  155 (382)
T TIGR00902        80 SAIFAA---AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF  155 (382)
T ss_pred             HHHHHH---HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            111111   111122344444444433444444444544444443 3477899999999999999999999999988775


Q ss_pred             cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734        366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI  445 (817)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (817)
                                                                   +|+..|++.+.+.++..... .+.++.+++ +++ 
T Consensus       156 ---------------------------------------------g~~~~f~~~~~~~~~~~~~~-~~~~~~~~~-~~~-  187 (382)
T TIGR00902       156 ---------------------------------------------DEQNILAILTAGLAFMLIGF-LIKPTIPPK-DAI-  187 (382)
T ss_pred             ---------------------------------------------ChhHHHHHHHHHHHHHHHHH-HcCCCCCCC-ccc-
Confidence                                                         68888887765533333322 222111110 000 


Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                       +.                              +                                   +..        
T Consensus       188 -~~------------------------------~-----------------------------------~~~--------  193 (382)
T TIGR00902       188 -PE------------------------------D-----------------------------------ESQ--------  193 (382)
T ss_pred             -cc------------------------------c-----------------------------------ccc--------
Confidence             00                              0                                   000        


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhH
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPV  605 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~  605 (817)
                                                                                        ..+++++++|+|++
T Consensus       194 ------------------------------------------------------------------~~~~~~~~l~~~~~  207 (382)
T TIGR00902       194 ------------------------------------------------------------------GDSAFIALLKNPMN  207 (382)
T ss_pred             ------------------------------------------------------------------cchhHHHHHcChHH
Confidence                                                                              00124577899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734        606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG  685 (817)
Q Consensus       606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~  685 (817)
                      |...+..++...+...+.++.|.|+++ .|.+..+++.......++.+++.++.+++.||+++|+.+          ..+
T Consensus       208 ~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l----------~~~  276 (382)
T TIGR00902       208 LRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLL----------LIS  276 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHH----------HHH
Confidence            999999999999999999999999987 899999999999988899999999999999999987653          477


Q ss_pred             HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHH-HHHHHHhHHHHHHHHhhcC
Q psy11734        686 AVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNG-LGCVSGMVAPLTVGFLTQN  764 (817)
Q Consensus       686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~i~p~~~g~~~~~  764 (817)
                      .+...+...++.+.+ +.+.......+-++..+...+....+..+..+++++++.++.+. ...+|.+++|.+.|.+.|+
T Consensus       277 ~~~~~~~~~~~~~~~-~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~  355 (382)
T TIGR00902       277 AIACVGRWAIIGAIE-AFPLIFLLQILHCGTFAVCHLAAMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT  355 (382)
T ss_pred             HHHHHHHHHHHHhHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            777777766666644 56666767777777777777777777777744789999999874 4568999999999999999


Q ss_pred             CccccHHHHHHHHHHHHHHHHHHH
Q psy11734        765 KTLLEWRVVFWIMFLTLFISNVFF  788 (817)
Q Consensus       765 ~g~~~~~~~~~~~~~~~~i~~~~~  788 (817)
                      .+   + ..|+.++.+.+++.+..
T Consensus       356 ~g---~-~~~~~~~~~~~~~~~~~  375 (382)
T TIGR00902       356 LG---A-GTFVFMAIIAAAAFFLI  375 (382)
T ss_pred             cc---H-HHHHHHHHHHHHHHHHH
Confidence            85   4 55777777777665443

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.86  E-value=2.2e-21  Score=203.59  Aligned_cols=284  Identities=16%  Similarity=0.165  Sum_probs=234.3

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccC---cchhHHHHhhhHHHHHhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTAS---WANVFYIFGAIAVLWFAF   78 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~g---Wr~~f~i~~~~~~i~~~~   78 (817)
                      +.+.|++.| .+..++..+++|||||++|.++|+.. ..++|..+...++..++. ..|   ||.+-.+..+..++..+.
T Consensus       112 gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~-~~g~~~w~~~~~i~~~~l~v~~v~  188 (417)
T COG2223         112 GLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV-AFGFLAWRNVAGIYVVALAIAAVL  188 (417)
T ss_pred             HHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHH
Confidence            567788666 89999999999999999999999999 889999999999999999 888   999999999999998888


Q ss_pred             hhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHH
Q psy11734         79 WCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGF  158 (817)
Q Consensus        79 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (817)
                      .++..+|.|+.++..++.+                                                             
T Consensus       189 ~~~~~~d~p~~r~~~~~~~-------------------------------------------------------------  207 (417)
T COG2223         189 AWLGMNDVPEHRASVKPQL-------------------------------------------------------------  207 (417)
T ss_pred             HHHHhCCChhhhccccccc-------------------------------------------------------------
Confidence            8888888775421111000                                                             


Q ss_pred             HHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcc
Q psy11734        159 LSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSV  238 (817)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~  238 (817)
                                                        +...+.+++|++.|...+.++.+.+++-++..++|.|+++.+|.+.
T Consensus       208 ----------------------------------~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~  253 (417)
T COG2223         208 ----------------------------------PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSP  253 (417)
T ss_pred             ----------------------------------hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence                                              0236778999999999999999999999999999999999999999


Q ss_pred             cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC------CChhHHHHHHHH
Q psy11734        239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG------CNTSMVAIFFTI  312 (817)
Q Consensus       239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l  312 (817)
                      .++|.........+.+.++.+|+++||+|.+|.          .......+.++...+....      .+.......+..
T Consensus       254 ~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv----------~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  323 (417)
T COG2223         254 VTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV----------TLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLA  323 (417)
T ss_pred             hhHHHHHHHHHHHHHHHHhccchhhhhccchhH----------HHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHH
Confidence            999999999999999999999999999999986          5555555555555554443      223333443444


Q ss_pred             HHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccc
Q psy11734        313 GMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVS  392 (817)
Q Consensus       313 ~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (817)
                      ...+.+.....+...+....|++.|.+.|+....+.+|+..-|...|...|.+|                          
T Consensus       324 l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg--------------------------  377 (417)
T COG2223         324 LFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG--------------------------  377 (417)
T ss_pred             HHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcc--------------------------
Confidence            455666777777777888888999999999999999999999999999888875                          


Q ss_pred             cccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734        393 GMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE  437 (817)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~  437 (817)
                                        +++..|++...+.+++.+.....++++
T Consensus       378 ------------------~~~~~f~~~~~~~~~a~v~~~~~y~r~  404 (417)
T COG2223         378 ------------------SYTGAFMLLLAFYLVALVLTWALYARR  404 (417)
T ss_pred             ------------------cHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                              589999999999998888776666554

>TIGR00898 2A0119 cation transport protein

Probab=99.86  E-value=7.9e-20  Score=210.65  Aligned_cols=277  Identities=17%  Similarity=0.174  Sum_probs=204.3

Q ss_pred             CCCCCCCceeeecccccccccccCC---hhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHh
Q psy11734        495 FPNANGNHTVVSKTYTTLDAKFDWD---ERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI  571 (817)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a  571 (817)
                      ..|.+++.++.+...|.+.+|+|++   +.+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++++++
T Consensus        98 ~~~~~~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~  177 (505)
T TIGR00898        98 EPCLDGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS  177 (505)
T ss_pred             CCCCCCcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc
Confidence            4677888888777889999999999   9999999999999999999999999999999999999999999999999999


Q ss_pred             hhcchHHHHHHHHHHhhhcc------------------------------------------------------------
Q psy11734        572 AHSGPVSMTVLRFLEGVGED------------------------------------------------------------  591 (817)
Q Consensus       572 ~~~s~~~l~~~R~l~Gig~~------------------------------------------------------------  591 (817)
                      +  +++.+++.|+++|++.+                                                            
T Consensus       178 ~--~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~  255 (505)
T TIGR00898       178 P--NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFL  255 (505)
T ss_pred             c--cHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            9  99999999999999998                                                            


Q ss_pred             --------cC------------------------------------------------chhHHhhcCHhHHHHHHHHHHH
Q psy11734        592 --------LE------------------------------------------------TPWAAILSSLPVWSLIISEVGH  615 (817)
Q Consensus       592 --------~~------------------------------------------------~~~~~~l~~~~~~~~~~~~~~~  615 (817)
                              .+                                                .++++++++|+++...+.....
T Consensus       256 ~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  335 (505)
T TIGR00898       256 FFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMML  335 (505)
T ss_pred             HHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHH
Confidence                    00                                                0123455566665554443332


Q ss_pred             HHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHH
Q psy11734        616 DYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA  695 (817)
Q Consensus       616 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~  695 (817)
                      ...........+.++ +..+.+..   .......+..+++.++.+++.||+|||+.+          ..+.++.++++++
T Consensus       336 ~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~----------~~~~~~~~~~~l~  401 (505)
T TIGR00898       336 WFTTAFSYYGLVLDL-GNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTM----------AASLLLAGVALLL  401 (505)
T ss_pred             HHHHHHHHHHHhccc-cccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHH
Confidence            222221111222222 22455533   333455678889999999999999987653          4556666666666


Q ss_pred             HHhhcCch-HHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHH
Q psy11734        696 ASYVGCNT-SMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVV  773 (817)
Q Consensus       696 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~  773 (817)
                      +.+.+... +.......+..++....++..+.+..|.+| +.|++++|+.+..+.+|++++|.+.+ +.+. +   +...
T Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-~---~~~~  476 (505)
T TIGR00898       402 LLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK-W---LFLP  476 (505)
T ss_pred             HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-H---HhhH
Confidence            65554332 444444455555556667777788899999 77999999999999999999999998 4333 2   4567


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q psy11734        774 FWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       774 ~~~~~~~~~i~~~~~~~~~  792 (817)
                      +.+.+++.+++.+..++++
T Consensus       477 ~~~~~~~~~~~~~~~~~lp  495 (505)
T TIGR00898       477 LVLFGGLALLAGILTLFLP  495 (505)
T ss_pred             HHHHHHHHHHHHHHHHcCc
Confidence            7777777777766666553

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.86  E-value=2.9e-21  Score=217.74  Aligned_cols=256  Identities=12%  Similarity=0.121  Sum_probs=174.2

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc--------ccccCcchhHHHHhhhH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM--------SFTASWANVFYIFGAIA   72 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~--------~~~~gWr~~f~i~~~~~   72 (817)
                      +|++||+|.|+.+|.+.++++|++|+|||+++.++...+...|..+++.+...+.        + .+|||++|++.+++.
T Consensus       130 ~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~gWr~~F~i~~~~~  208 (432)
T PRK10406        130 ARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELR-EWGWRIPFALGAVLA  208 (432)
T ss_pred             HHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHh-ccchHHHHHHHHHHH
Confidence            4999999999999999999999999999999999999998899888887765543        2 579999999987766


Q ss_pred             HHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCcc
Q psy11734         73 VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKH  152 (817)
Q Consensus        73 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (817)
                      ++...+ ...+   ||++++    ++++      .    +                                        
T Consensus       209 ll~~~~-~~~~---~e~~~~----~~~~------~----~----------------------------------------  230 (432)
T PRK10406        209 VVALWL-RRQL---DETSQQ----ETRA------L----K----------------------------------------  230 (432)
T ss_pred             HHHHHH-HhcC---CCCchH----HHhh------h----c----------------------------------------
Confidence            654322 2222   322211    1000      0    0                                        


Q ss_pred             chhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHH-HHHHHHHhhchhhHHH
Q psy11734        153 TLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGH-DYGLYLISTDLPKYMS  231 (817)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~-~~~~~~~~~~~p~~l~  231 (817)
                                                             ++.++++++|+|+.+...+...+. ...+|.+..|+|.|++
T Consensus       231 ---------------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~  271 (432)
T PRK10406        231 ---------------------------------------EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLV  271 (432)
T ss_pred             ---------------------------------------ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                   012467788999888776665543 6778889999999999


Q ss_pred             HhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH-hh--hccCCChhHHHH
Q psy11734        232 EVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL-AA--SYVGCNTSMVAI  308 (817)
Q Consensus       232 ~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~  308 (817)
                      +.+|++..+++.......++..++.++.|+++||++||+.          ...+..+..+... ..  ....++......
T Consensus       272 ~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (432)
T PRK10406        272 NTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTS----------MLCFGSLAALFTVPILSALQNVSSPYAAFG  341 (432)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH----------HHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence            8889999898888888888888999999999999998874          3333222222211 11  111112222222


Q ss_pred             HHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhh-cccccccccceecccc
Q psy11734        309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNI  365 (817)
Q Consensus       309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~l-g~~~~~~i~g~l~~~~  365 (817)
                      .+.+..+..+...+.......|..| |+|++++|+.+.+.++ .+...|.+.+ +.+..
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~-~l~~~  399 (432)
T PRK10406        342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL-SLKSI  399 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH-HHHHh
Confidence            3333333333333445666777776 7899999999988775 3445677666 33443

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.86  E-value=1.8e-19  Score=201.45  Aligned_cols=284  Identities=13%  Similarity=0.042  Sum_probs=208.4

Q ss_pred             HHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHH
Q psy11734        453 GIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYY  532 (817)
Q Consensus       453 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~  532 (817)
                      ...+.+..+...++...+.+.+|.+.+                                   ++|.+.++.++..++|.+
T Consensus        18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~-----------------------------------~~~~~~~~~~~~~s~~~~   62 (413)
T PRK15403         18 PMALILYDFAAYLTTDLIQPGIINVVR-----------------------------------DFNADVSLAPASVSLYLA   62 (413)
T ss_pred             HHHHHHHHHHHHHHHHhhccCHHHHHH-----------------------------------HhCCCHHHHHHHHHHHHH
Confidence            335566667778888889999988888                                   999999999999999999


Q ss_pred             HHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------------------
Q psy11734        533 GYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---------------------  591 (817)
Q Consensus       533 ~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---------------------  591 (817)
                      ++++++++.|.++||+|||+++..++++++++++++++++  |++.++++|+++|++.+                     
T Consensus        63 ~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~  140 (413)
T PRK15403         63 GGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT--SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIK  140 (413)
T ss_pred             HHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            9999999999999999999999999999999999999999  99999999999999877                     


Q ss_pred             ---------------------------------------------------c------C---------chhHHhhcCHhH
Q psy11734        592 ---------------------------------------------------L------E---------TPWAAILSSLPV  605 (817)
Q Consensus       592 ---------------------------------------------------~------~---------~~~~~~l~~~~~  605 (817)
                                                                         +      +         +++++++|||.+
T Consensus       141 ~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~  220 (413)
T PRK15403        141 LMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLF  220 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHH
Confidence                                                               0      0         123467889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734        606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG  685 (817)
Q Consensus       606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~  685 (817)
                      |...+..++.....+.+..+.|.++++..|.++.+.++.......+..++..+.+++.+|..+++...   .......++
T Consensus       221 ~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~---~~~~~~~ig  297 (413)
T PRK15403        221 LTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIW---RAVPIQLVG  297 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHH---HHHHHHHHH
Confidence            99988888888888888899999999989999999999887788888888877777665444332210   000111122


Q ss_pred             HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy11734        686 AVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK  765 (817)
Q Consensus       686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~  765 (817)
                      ..+......   ...++.+.......+.+.+.+...+..........+..+|++.++.+..+..+...++...+++.++.
T Consensus       298 ~~l~~~~~~---~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~  374 (413)
T PRK15403        298 LALLIVGNL---LWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG  374 (413)
T ss_pred             HHHHHHHHH---HccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            221111110   11212222334444455555555555553333333345899999999999999999999999988774


Q ss_pred             ccccHHHHHHHHHHHHHH
Q psy11734        766 TLLEWRVVFWIMFLTLFI  783 (817)
Q Consensus       766 g~~~~~~~~~~~~~~~~i  783 (817)
                      .    ...|...+++..+
T Consensus       375 ~----~~~~~~~~~~~~~  388 (413)
T PRK15403        375 G----RLPFHLLAVVAGV  388 (413)
T ss_pred             C----chHHHHHHHHHHH
Confidence            3    3455444444443

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.86  E-value=2.8e-20  Score=203.48  Aligned_cols=346  Identities=23%  Similarity=0.322  Sum_probs=246.7

Q ss_pred             HHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHH
Q psy11734        209 IISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVL  288 (817)
Q Consensus       209 ~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~  288 (817)
                      ++..++...........+|.++++.+|.|..+.+++.....++..+++++.|+++||+|||+.          +..+..+
T Consensus         2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------l~~~~~~   71 (352)
T PF07690_consen    2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRV----------LIIGLLL   71 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHH----------HHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeee----------Eeehhhh
Confidence            345556666666677777867777789999999999999999999999999999999999985          7777777


Q ss_pred             HHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccc
Q psy11734        289 PGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIIS  367 (817)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~  367 (817)
                      ..++.+...+.. +.+.......+.+.+.+...+.......+..| ++|++++++.+....+|..++|.+.+.+.++.  
T Consensus        72 ~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--  148 (352)
T PF07690_consen   72 FALGSLLLAFAS-NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF--  148 (352)
T ss_dssp             HHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC--
T ss_pred             hhhHHHHhhhhh-hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc--
Confidence            777744444333 44456666666666666777777777777666 69999999999999999999999999888664  


Q ss_pred             cCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecc-cccccccCCCC
Q psy11734        368 INPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS-GEVQYWNESIL  446 (817)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  446 (817)
                                                                 +|+..|++.+++.+++.++..++.+ +++++..++..
T Consensus       149 -------------------------------------------~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~  185 (352)
T PF07690_consen  149 -------------------------------------------GWRWAFLISAILSLIAAILFILFLPEPPPPRERESPK  185 (352)
T ss_dssp             -------------------------------------------HHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SST
T ss_pred             -------------------------------------------ccccccccccchhhhhhhhHhhhhhhccccccccccc
Confidence                                                       6999999999999888775333322 22221111100


Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734        447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI  526 (817)
Q Consensus       447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~  526 (817)
                      +.                                                                  +           
T Consensus       186 ~~------------------------------------------------------------------~-----------  188 (352)
T PF07690_consen  186 ES------------------------------------------------------------------E-----------  188 (352)
T ss_dssp             TT------------------------------------------------------------------T-----------
T ss_pred             cc------------------------------------------------------------------c-----------
Confidence            00                                                                  0           


Q ss_pred             HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCch-hHHhhcCHhH
Q psy11734        527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETP-WAAILSSLPV  605 (817)
Q Consensus       527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~-~~~~l~~~~~  605 (817)
                                                                .-.+  +                ...+ ++++.++|.+
T Consensus       189 ------------------------------------------~~~~--~----------------~~~~~~~~~~~~~~~  208 (352)
T PF07690_consen  189 ------------------------------------------SKKP--K----------------PLKPGFKSLFKNPVL  208 (352)
T ss_dssp             --------------------------------------------HH--H----------------CCCH-CTHHHHHHCC
T ss_pred             ------------------------------------------cccc--c----------------ccccccccccccchh
Confidence                                                      0000  0                1112 5667777777


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHH
Q psy11734        606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLS-VAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATL  684 (817)
Q Consensus       606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s-~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~  684 (817)
                      |......++.....+....+.|.|+++.+|.+ ..+.+.......+.+.++.++.|+++||+++++..       .....
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~  281 (352)
T PF07690_consen  209 WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRL-------LIAIL  281 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH-------HHHHH
T ss_pred             hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH-------HHHHH
Confidence            76666667777788889999999988889999 89999999999999999999999999999976432       12222


Q ss_pred             HHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHH
Q psy11734        685 GAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAP  755 (817)
Q Consensus       685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p  755 (817)
                      ...+..+.+...... .+.........+.+++.+...+.......+..| +++|++.|+.+...++++.++|
T Consensus       282 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP  352 (352)
T PF07690_consen  282 LLILGALGLLLLPFS-SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP  352 (352)
T ss_dssp             HHHHHHHHHCCSHHH-CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            222222222222222 133444445555666667777888888888887 8899999999999999999998

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>KOG2533|consensus

Probab=99.85  E-value=1.7e-21  Score=216.77  Aligned_cols=276  Identities=15%  Similarity=0.140  Sum_probs=200.8

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-----cccCcchhHHHHhhhHHHH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-----FTASWANVFYIFGAIAVLW   75 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-----~~~gWr~~f~i~~~~~~i~   75 (817)
                      +|++.|+.+++.+|....+++.||.++||++.+|++.+..++|+++|..+...+.+     ...||||.|++.|.++++.
T Consensus       140 lr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~  219 (495)
T KOG2533|consen  140 LRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVL  219 (495)
T ss_pred             HHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHH
Confidence            49999999999999999999999999999999999999999999999999988632     2689999999999999999


Q ss_pred             HhhhhheeccCCCCCCCCCHHHHhHhhhhcccccccc-ccccccCccccchhhhhhhhchhhccccccccccccCCccch
Q psy11734         76 FAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRK-DAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTL  154 (817)
Q Consensus        76 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (817)
                      .++.++++|+.|++.+..+++|+....++.++..... ++++                                      
T Consensus       220 gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~--------------------------------------  261 (495)
T KOG2533|consen  220 GIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKF--------------------------------------  261 (495)
T ss_pred             HheEEEEecCChhhccccchHHHHHHHHHHHhccCCCccccc--------------------------------------
Confidence            9999999999999887777666544433333211111 1101                                      


Q ss_pred             hHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhh
Q psy11734        155 GLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVI  234 (817)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~  234 (817)
                                                           ++..+++.+++|.+|...+..++.....+++.+|+|.|+.+..
T Consensus       262 -------------------------------------~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~  304 (495)
T KOG2533|consen  262 -------------------------------------KWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNG  304 (495)
T ss_pred             -------------------------------------CHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCC
Confidence                                                 2334789999999999999999999999999999999999966


Q ss_pred             CCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHH
Q psy11734        235 GLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGM  314 (817)
Q Consensus       235 g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  314 (817)
                      |+|..+++.+..|..++++++.+++|.++||...-     ...|........+...++...+.... ........+..+.
T Consensus       305 ~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~-----~~~~~~~~~~~~~~~~~g~~~l~~~~-~~~~~~~~~~~~~  378 (495)
T KOG2533|consen  305 GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTI-----FARRLLFIVFLCLYAIIGAISLLAAA-VLPGAYGAFLIGP  378 (495)
T ss_pred             CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhh-----HHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHhHHHHhcc
Confidence            79999999999999999999999999999996400     01122234444444445545554442 3333333333333


Q ss_pred             HHhhhccccccccccc-cCC-CchhHHHHHHHhhhhhcccccccc
Q psy11734        315 AFMGFCYASIRVNPID-LSP-NFSGTIMALSNGLGCVSGMVAPLT  357 (817)
Q Consensus       315 ~~~g~~~~~~~~~~~~-~~p-~~~g~a~g~~~~~~~lg~~~~~~i  357 (817)
                      .+.....+......++ ..+ .++-+..++.......+++++|++
T Consensus       379 ~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~  423 (495)
T KOG2533|consen  379 YGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQL  423 (495)
T ss_pred             hhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhh
Confidence            3333333333333333 344 345555555555566666666554

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.85  E-value=6.3e-19  Score=199.46  Aligned_cols=383  Identities=18%  Similarity=0.128  Sum_probs=280.2

Q ss_pred             HhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhH
Q psy11734        199 ILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVR  278 (817)
Q Consensus       199 l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~  278 (817)
                      -+|||.|...++...+.+.+......-.+-++.+ ..-|+...+++.....+..++.++++|.++||++||++       
T Consensus         6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrri-------   77 (524)
T PF05977_consen    6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRI-------   77 (524)
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH-------
Confidence            4889999999999999888888888778877766 47788889999999999999999999999999999986       


Q ss_pred             HHHHHHHhHHHHHHHHh---hhccC-CChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccc
Q psy11734        279 KVFATLGAVLPGVGALA---ASYVG-CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMV  353 (817)
Q Consensus       279 ~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~  353 (817)
                         +.....+..+....   +.... .+.+..++..++.+.+..+..|...+...++.| ++...++++++...++...+
T Consensus        78 ---li~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i  154 (524)
T PF05977_consen   78 ---LILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII  154 (524)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc
Confidence               44444444322222   22222 245556666666677777778888888888666 68999999999999999999


Q ss_pred             cccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734        354 APLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF  433 (817)
Q Consensus       354 ~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~  433 (817)
                      ||.++|.+....                                             |...+|.+-++..+++......+
T Consensus       155 GPalgG~Lva~~---------------------------------------------G~~~~f~inalsfl~~i~~l~~~  189 (524)
T PF05977_consen  155 GPALGGILVAFF---------------------------------------------GAAAAFLINALSFLISILALLRW  189 (524)
T ss_pred             cchHHHHHHHHH---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999988765                                             45667777776666554443333


Q ss_pred             cccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccc
Q psy11734        434 GSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLD  513 (817)
Q Consensus       434 ~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (817)
                      +++ .++.+.+ .+                                                               .+.
T Consensus       190 ~~~-~~~~~~~-~e---------------------------------------------------------------~~~  204 (524)
T PF05977_consen  190 KPP-PPPSSLP-RE---------------------------------------------------------------RFF  204 (524)
T ss_pred             ccc-ccccccc-hh---------------------------------------------------------------hhh
Confidence            222 1110000 00                                                               000


Q ss_pred             ccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccC
Q psy11734        514 AKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLE  593 (817)
Q Consensus       514 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~  593 (817)
                      +++                                                                            +
T Consensus       205 ~~l----------------------------------------------------------------------------~  208 (524)
T PF05977_consen  205 SAL----------------------------------------------------------------------------R  208 (524)
T ss_pred             hhH----------------------------------------------------------------------------H
Confidence            000                                                                            1


Q ss_pred             chhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Q psy11734        594 TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILS  673 (817)
Q Consensus       594 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~  673 (817)
                      ..++-+.++|.+.......++++.....+...+|.+.++.+|.++...|++.+..++++++|.++.+++.+|+++++.+ 
T Consensus       209 ~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv-  287 (524)
T PF05977_consen  209 EGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLV-  287 (524)
T ss_pred             HHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhh-
Confidence            1234445567666666655666666666677799999999999999999999999999999999999999998876643 


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHh
Q psy11734        674 RTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGM  752 (817)
Q Consensus       674 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~  752 (817)
                               ..+.+..+++++.+.+.+ +.+.....+++.+++.........+..++..| +.||+++++.+++...+..
T Consensus       288 ---------~~~~~~~a~~~~~lal~~-~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~  357 (524)
T PF05977_consen  288 ---------LLASLLFALALLLLALSP-SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMP  357 (524)
T ss_pred             ---------HHHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHH
Confidence                     356666666666666654 56666666677777766666777777888888 7799999999999999999


Q ss_pred             HHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734        753 VAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       753 i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~  792 (817)
                      +|..+.|.+.|..|   .+.++.+.++..+++.++....+
T Consensus       358 lGsll~G~la~~~g---~~~al~~a~~~lll~~~~~~~~~  394 (524)
T PF05977_consen  358 LGSLLWGFLADHFG---VRTALLIAGAALLLSALIALRFP  394 (524)
T ss_pred             HHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999986   56677777776666666665553

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK09952 shikimate transporter; Provisional

Probab=99.85  E-value=6e-21  Score=215.25  Aligned_cols=289  Identities=16%  Similarity=0.168  Sum_probs=196.2

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-------cccCcchhHHHHhhhHH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-------FTASWANVFYIFGAIAV   73 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-------~~~gWr~~f~i~~~~~~   73 (817)
                      +|++||++.|+.+|.+.+++.|++|+|||++..+....+..+|..++..+..++..       ..+|||+.|++.+++.+
T Consensus       131 ~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l  210 (438)
T PRK09952        131 LRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL  210 (438)
T ss_pred             HHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence            49999999999999999999999999999999999999999999999888776652       14799999998876544


Q ss_pred             HHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccc
Q psy11734         74 LWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHT  153 (817)
Q Consensus        74 i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (817)
                      +...    ..+..||++++.+.+++.      ++    .+                                        
T Consensus       211 ~~~~----l~~~~~es~~~~~~~~~~------~~----~~----------------------------------------  236 (438)
T PRK09952        211 IALW----VRNGMEESAEFEQQQHEQ------AA----AK----------------------------------------  236 (438)
T ss_pred             HHHH----HHHhCCCChhHHHHHhhc------cc----cc----------------------------------------
Confidence            3221    112223332211110000      00    00                                        


Q ss_pred             hhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCch-HHHHhhchhHHHHHH-HHHHHHHHHHHHhhchhhHHH
Q psy11734        154 LGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP-WAAILYSLPVWSLII-SEVGHDYGLYLISTDLPKYMS  231 (817)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i-~~~~~~~~~~~~~~~~p~~l~  231 (817)
                                                            ++.+ .+.++|+|+.+...+ ..++.....|....|.|.|++
T Consensus       237 --------------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~  278 (438)
T PRK09952        237 --------------------------------------KRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYST  278 (438)
T ss_pred             --------------------------------------ccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                  0112 234667777665543 455667788888899999999


Q ss_pred             HhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc---cCCChhHHHH
Q psy11734        232 EVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY---VGCNTSMVAI  308 (817)
Q Consensus       232 ~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  308 (817)
                      +.+|++...........++...++.++.|+++||++||+.          ...+.++..++...+..   ..++......
T Consensus       279 ~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (438)
T PRK09952        279 QNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRV----------YITGALIGTLSAFPFFMALEAQSIFWIVFF  348 (438)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH----------HHHHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence            8889888765555556677888899999999999999875          34444433333222211   1212222233


Q ss_pred             HHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhh-hcccccccccceecccccccCCCCCCCCCccchhhccc
Q psy11734        309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC-VSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSN  386 (817)
Q Consensus       309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~-lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  386 (817)
                      ...+.+++.+...+.......|..| ++|+++.|+.+.+.. ++++++|.+.+.+.|..+                    
T Consensus       349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~--------------------  408 (438)
T PRK09952        349 SIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG--------------------  408 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC--------------------
Confidence            3334344555555556677778666 789999999776654 899999999999887542                    


Q ss_pred             CccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734        387 GLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG  434 (817)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~  434 (817)
                                             .+|...+.+.+++.+++.+..+..+
T Consensus       409 -----------------------~~~~~~~~~~~~~~~i~~v~~~~~~  433 (438)
T PRK09952        409 -----------------------GSWHSVAIYLLAGCLISAMTALLMK  433 (438)
T ss_pred             -----------------------CCchHHHHHHHHHHHHHHHHHHHcc
Confidence                                   1477888888888888887776553

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.85  E-value=6.7e-19  Score=196.16  Aligned_cols=270  Identities=18%  Similarity=0.209  Sum_probs=209.5

Q ss_pred             hHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHH
Q psy11734        449 RYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILS  528 (817)
Q Consensus       449 ~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s  528 (817)
                      .++.+.++.+..+...+....+.+..|.+.+                                   |+|+|+.+.+++.+
T Consensus         6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~-----------------------------------~~~~s~~~~~~~~~   50 (394)
T PRK11652          6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMAR-----------------------------------DLNVREGAVQAVMA   50 (394)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccHHHHHH-----------------------------------HhCCCHHHHHHHHH
Confidence            3455555666666777777888888888888                                   99999999999999


Q ss_pred             HHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-----------------
Q psy11734        529 AFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-----------------  591 (817)
Q Consensus       529 ~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-----------------  591 (817)
                      .+.+++.+++++.|+++||+|||+++.++.+..+++.+++.+++  +++.+++.|+++|++.+                 
T Consensus        51 ~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  128 (394)
T PRK11652         51 AYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH--SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT  128 (394)
T ss_pred             HHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH
Confidence            99999999999999999999999999999999999999999999  99999999999999876                 


Q ss_pred             -------------------------------------------------------c------------CchhHHhhcCHh
Q psy11734        592 -------------------------------------------------------L------------ETPWAAILSSLP  604 (817)
Q Consensus       592 -------------------------------------------------------~------------~~~~~~~l~~~~  604 (817)
                                                                             +            ..++++.+|+|+
T Consensus       129 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (394)
T PRK11652        129 QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARRTRVLASYRTLLSNRR  208 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccchhHHHHHHHHHHcChH
Confidence                                                                   0            011345677888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHH
Q psy11734        605 VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATL  684 (817)
Q Consensus       605 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~  684 (817)
                      ++...+..+........+..+.|.++++.+|.+..+.+.......++..++..+.+++.||.+++.         .....
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~---------~~~~~  279 (394)
T PRK11652        209 FNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM---------WQSVI  279 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHH
Confidence            877666666666666667778889999989999999999888888888889999999999987432         11122


Q ss_pred             HHHHHHHHHHHHHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734        685 GAVLPGVGALAASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  763 (817)
Q Consensus       685 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~  763 (817)
                      ......+........ ..+.+.......+.+++.+...+.......+..|+++|++.++.+....+|+.+++.+.+.+.+
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~  359 (394)
T PRK11652        280 CCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQ  359 (394)
T ss_pred             HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            222222222222221 1233444445555666666677777777788889999999999999999999999999998766


Q ss_pred             C
Q psy11734        764 N  764 (817)
Q Consensus       764 ~  764 (817)
                      .
T Consensus       360 ~  360 (394)
T PRK11652        360 T  360 (394)
T ss_pred             C
Confidence            5

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.85  E-value=5.6e-20  Score=202.64  Aligned_cols=360  Identities=18%  Similarity=0.136  Sum_probs=237.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHH
Q psy11734        204 PVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFAT  283 (817)
Q Consensus       204 ~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~  283 (817)
                      +++...+..++.....+....+.|.++++.+|.|..+.+++.....++..++.++.|+++||+|||+.          +.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------~~   71 (366)
T TIGR00886         2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYT----------TT   71 (366)
T ss_pred             chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHH----------HH
Confidence            46777888888888889999999988888899999999999999999999999999999999999986          66


Q ss_pred             HHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734        284 LGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT  362 (817)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~  362 (817)
                      .+..+..++.+...+.+++.+...+...+.+.+.+. .........+..| ++|+++.++.....++|..+++.+.+.+.
T Consensus        72 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~  150 (366)
T TIGR00886        72 LSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII  150 (366)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            777777777666655541333333333333333332 2333445556554 79999999999999999888888877665


Q ss_pred             ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHH-HHHHHHHHhhhhheeecccccccc
Q psy11734        363 QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFW-IMFLALVISNVFFVLFGSGEVQYW  441 (817)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-i~~~~~~~~~~~~~~~~~~~~~~~  441 (817)
                      +.....                                   .++....+|++.|+ +.+++..+..++..++.++++++.
T Consensus       151 ~~~~~~-----------------------------------~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (366)
T TIGR00886       151 GSLIFG-----------------------------------AGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK  195 (366)
T ss_pred             HHHHhc-----------------------------------ccccccccccchhHHHHHHHHHHHHHHHHHhcccCCccc
Confidence            532100                                   00011236898884 334444433333333323322110


Q ss_pred             cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734        442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER  521 (817)
Q Consensus       442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  521 (817)
                      +++ .+.                              +         .+  .             +       ..+.   
T Consensus       196 ~~~-~~~------------------------------~---------~~--~-------------~-------~~~~---  210 (366)
T TIGR00886       196 PAT-GKL------------------------------S---------FK--G-------------A-------RWSV---  210 (366)
T ss_pred             ccc-hhc------------------------------c---------cc--c-------------c-------cccc---
Confidence            000 000                              0         00  0             0       0000   


Q ss_pred             hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734        522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS  601 (817)
Q Consensus       522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~  601 (817)
                                              +    +                    .  +                 ..+.++.++
T Consensus       211 ------------------------~----~--------------------~--~-----------------~~~~~~~~~  223 (366)
T TIGR00886       211 ------------------------G----T--------------------G--A-----------------LGDQLKVFR  223 (366)
T ss_pred             ------------------------c----c--------------------h--h-----------------HHHHHHHHh
Confidence                                    0    0                    0  0                 001345677


Q ss_pred             CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734        602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF  681 (817)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~  681 (817)
                      +|++|...+..++.....+.+..+.|.|+++.+|.++.+++.+.....+.+++++++.|+++||+|+|+.+         
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~---------  294 (366)
T TIGR00886       224 DRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL---------  294 (366)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH---------
Confidence            88888888888888888888999999999999999999999999999999999999999999999987542         


Q ss_pred             HHHHHHHHHHHHHHHHhhcC---chHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHH
Q psy11734        682 ATLGAVLPGVGALAASYVGC---NTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSG  751 (817)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  751 (817)
                       ..+......+..++.....   +.+.......+.....+...+..+....+..|+++|+++|+.+..+++|+
T Consensus       295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  366 (366)
T TIGR00886       295 -LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLGG  366 (366)
T ss_pred             -HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCCC
Confidence             1233333333333332221   23333444444555556666667777888889999999999999988763

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.85  E-value=1.2e-20  Score=214.92  Aligned_cols=299  Identities=12%  Similarity=0.054  Sum_probs=204.2

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc--------cccCcchhHHHHhhhH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS--------FTASWANVFYIFGAIA   72 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~--------~~~gWr~~f~i~~~~~   72 (817)
                      .|+++|++.+.. +.....++|++|+++|++++|+......+|..+++.+.+.+..        ...|||+.|++.+++.
T Consensus       130 ~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~  208 (476)
T PLN00028        130 VRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLH  208 (476)
T ss_pred             HHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHH
Confidence            388999998865 4456789999999999999999988777777777666654422        0258999999999988


Q ss_pred             HHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCcc
Q psy11734         73 VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKH  152 (817)
Q Consensus        73 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (817)
                      +++.++.+++.+++|+++  .++.+++      ..   .++.                                      
T Consensus       209 l~~~l~~~~~~~~~p~~~--~~~~~~~------~~---~~~~--------------------------------------  239 (476)
T PLN00028        209 IIMGILVLTLGQDLPDGN--YRELKKS------GT---MPKD--------------------------------------  239 (476)
T ss_pred             HHHHHHHHHHcCcCCCCc--hhhHHhc------Cc---cccc--------------------------------------
Confidence            888777766655544321  0000000      00   0000                                      


Q ss_pred             chhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHH
Q psy11734        153 TLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSE  232 (817)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~  232 (817)
                                                            .....+++.++++++|...+..++.....+....|+|.|+.+
T Consensus       240 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~  281 (476)
T PLN00028        240 --------------------------------------SFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYD  281 (476)
T ss_pred             --------------------------------------cHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence                                                  001125677889999988888777777778888899999988


Q ss_pred             hhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHH
Q psy11734        233 VIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTI  312 (817)
Q Consensus       233 ~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  312 (817)
                      .+|++..+++.+.....+++.++++++|+++||+++|+.   ...|+........+.++.++.+.... +.......+.+
T Consensus       282 ~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~---~~~r~~~~~~~~~l~~i~~~~~~~~~-~~~~~~~~~~l  357 (476)
T PLN00028        282 RFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFG---MRGRLWALWIVQTLGGVFCIWLGRAN-SLGAAIVVMIL  357 (476)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcC---cchhHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHH
Confidence            889999999999999999999999999999999998752   11244444444444444444333333 33333333333


Q ss_pred             HHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccc
Q psy11734        313 GMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVS  392 (817)
Q Consensus       313 ~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (817)
                      ..++.+...+.......++.|+++|++.|+.+...++|+.++|.+.+    ..+                          
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~----~~~--------------------------  407 (476)
T PLN00028        358 FSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF----TGS--------------------------  407 (476)
T ss_pred             HHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH----hcC--------------------------
Confidence            44444344444555566778899999999998877777777665533    110                          


Q ss_pred             cccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734        393 GMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE  437 (817)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~  437 (817)
                                      ..+|+..|++.+++.+++.++.++....+
T Consensus       408 ----------------~~~y~~~f~~~~~~~~i~~~~~~~~~~~~  436 (476)
T PLN00028        408 ----------------SYSTETGISLMGVMIIACTLPVAFIHFPQ  436 (476)
T ss_pred             ----------------CccHhhHHHHHHHHHHHHHHHHHheeccc
Confidence                            12599999999998888888877765333

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.85  E-value=6e-21  Score=212.25  Aligned_cols=285  Identities=16%  Similarity=0.170  Sum_probs=205.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc-CcchhHHHHhhhHHHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA-SWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~-gWr~~f~i~~~~~~i~~~~~   79 (817)
                      .|+++|+|.+...+...+++.|++| |||+++++++.++...|..+|+.+++++.+ +. +||+.+.+.+...++.....
T Consensus       103 ~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~-~~~~w~~~~~~~~~~~~~~~~~~  180 (393)
T PRK09705        103 SALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQ-HSETWYQTLAWWALPAVVALFAW  180 (393)
T ss_pred             HHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHH
Confidence            3899999999999999999999996 889999999999999999999999999988 64 89999887765554443333


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      +...+++|+++      ++        +                                                    
T Consensus       181 ~~~~~~~~~~~------~~--------~----------------------------------------------------  194 (393)
T PRK09705        181 WWQSAREVASS------HK--------T----------------------------------------------------  194 (393)
T ss_pred             HHHhcCCCccc------cC--------C----------------------------------------------------
Confidence            32222222110      00        0                                                    


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                                                       +.+.++.+++|..+...+..++....+++...|.|.|+++ +|.+..
T Consensus       195 ---------------------------------~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~  240 (393)
T PRK09705        195 ---------------------------------TTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQ  240 (393)
T ss_pred             ---------------------------------CcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChh
Confidence                                             0001234567777777777777788888999999999988 799999


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~  319 (817)
                      ++|....+..+++++++++.|++.||.++|+.          ...+..+..++...+...+++.....  ..+.+.+.+.
T Consensus       241 ~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~  308 (393)
T PRK09705        241 YSGSLLALMTLGQAAGALLMPAMARHQDRRKL----------LMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGLGG  308 (393)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhccchHH----------HHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhccc
Confidence            99999999999999999999999999998875          55555555555554433332222221  2222333333


Q ss_pred             cccccc-ccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccc
Q psy11734        320 CYASIR-VNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAP  397 (817)
Q Consensus       320 ~~~~~~-~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (817)
                      ..+... ....+.+| +++++++|+.+.+.++++.++|.+.|.+.|..|                               
T Consensus       309 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g-------------------------------  357 (393)
T PRK09705        309 AFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG-------------------------------  357 (393)
T ss_pred             hHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------------------------------
Confidence            334333 23344544 689999999999999999999999999999865                               


Q ss_pred             ccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc-ccccC
Q psy11734        398 LTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV-QYWNE  443 (817)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~-~~~~~  443 (817)
                                   +|+..|++.+++.+++.++...+.+|++ +.|.|
T Consensus       358 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (393)
T PRK09705        358 -------------NYLMDWAFHALCVVGLMIITLRFAPARFPQLWVK  391 (393)
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHhccccccchhcc
Confidence                         5788888888888877776555555543 33433

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.85  E-value=1.3e-18  Score=193.63  Aligned_cols=346  Identities=14%  Similarity=0.097  Sum_probs=218.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHH
Q psy11734        203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFA  282 (817)
Q Consensus       203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~  282 (817)
                      |-+....+..+....+.......+|.+.++ +|.|..+.++......++..++.++.|+++||+|||+.          +
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~----------l   71 (392)
T PRK10473          3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPV----------A   71 (392)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHH----------H
Confidence            334455555566666666666778887766 79999999999999999999999999999999999885          6


Q ss_pred             HHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhhccccccccccee
Q psy11734        283 TLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFL  361 (817)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l  361 (817)
                      ..+..+..++.......+ +.........+.+.+.+...+.......|.. +++|+++.++.+....++..++|.+.+.+
T Consensus        72 ~~~~~~~~i~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l  150 (392)
T PRK10473         72 IPGAALFIIASLLCSLAE-TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI  150 (392)
T ss_pred             HHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666666666666665544 4333333333344444444444455666655 48999999999999999999999887766


Q ss_pred             cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccc
Q psy11734        362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYW  441 (817)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~  441 (817)
                      .+..                                             +|+..|++.+++.++..++..+..++++++.
T Consensus       151 ~~~~---------------------------------------------g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  185 (392)
T PRK10473        151 MLKF---------------------------------------------PWQSLFYTMAAMGILVLLLSLFILKETRPAR  185 (392)
T ss_pred             HhCc---------------------------------------------ChHHHHHHHHHHHHHHHHHHHHHcCCCCCcc
Confidence            5443                                             6999999988877766655444333322110


Q ss_pred             cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734        442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER  521 (817)
Q Consensus       442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  521 (817)
                      +++                                                                      +.  +..
T Consensus       186 ~~~----------------------------------------------------------------------~~--~~~  193 (392)
T PRK10473        186 APA----------------------------------------------------------------------AS--SKP  193 (392)
T ss_pred             cCC----------------------------------------------------------------------cc--chH
Confidence            000                                                                      00  000


Q ss_pred             hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734        522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS  601 (817)
Q Consensus       522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~  601 (817)
                                                                                              +..++.++
T Consensus       194 ------------------------------------------------------------------------~~~~~~~~  201 (392)
T PRK10473        194 ------------------------------------------------------------------------RENSESLL  201 (392)
T ss_pred             ------------------------------------------------------------------------HHHHHHHh
Confidence                                                                                    01123455


Q ss_pred             CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734        602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF  681 (817)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~  681 (817)
                      +|+++.......+.......+..+.|.++++.+|++..+.+.......+.++++.++.+++.||+++|+.+         
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~---------  272 (392)
T PRK10473        202 NRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLM---------  272 (392)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH---------
Confidence            66655544444444444555666778888888999999999999999999999999999999999987643         


Q ss_pred             HHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC--CchHHHHHHHHHHHHHHHhHHHHHHH
Q psy11734        682 ATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--NFSGTIMALSNGLGCVSGMVAPLTVG  759 (817)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~i~p~~~g  759 (817)
                       ..+..+..++.+.+.... +.+.......+...+.+...+..  ...+..|  +..+.+.++    ..++..++|.+.+
T Consensus       273 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~----~~~~~~~g~~~~~  344 (392)
T PRK10473        273 -LTSQVLFLAAGITLALSP-SHAVSLFGITLICAGFSVGFGVA--MSQALGPFSLRAGVASST----LGIAQVCGSSLWI  344 (392)
T ss_pred             -HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccccHHHHH----HHHHHHHHHHHHH
Confidence             345555455554444433 22222222222222222222222  2233334  333444444    4455566666666


Q ss_pred             HhhcCCc
Q psy11734        760 FLTQNKT  766 (817)
Q Consensus       760 ~~~~~~g  766 (817)
                      .+.+..+
T Consensus       345 ~l~~~~g  351 (392)
T PRK10473        345 WLAAVLG  351 (392)
T ss_pred             HHHHHhc
Confidence            6666655

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.85  E-value=2.9e-18  Score=194.65  Aligned_cols=435  Identities=11%  Similarity=0.050  Sum_probs=273.6

Q ss_pred             hhch-hHHHHHHHHHHHHHHHHHHhhchhhHHHHh--hCCcccccchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccch
Q psy11734        200 LYSL-PVWSLIISEVGHDYGLYLISTDLPKYMSEV--IGLSVAENGVLSALPFLIMWLVSMSSSALADF-FIARDILSRT  275 (817)
Q Consensus       200 ~~~~-~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~  275 (817)
                      +++| .++...+..++...++|+...++|.|+++.  +|++..++|.......++..++++++|+++|| +|||+.    
T Consensus         6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~----   81 (475)
T TIGR00924         6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT----   81 (475)
T ss_pred             cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH----
Confidence            4554 466777788888999999999999999986  89999999999999999999999999999999 799986    


Q ss_pred             hhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-C---chhHHHHHHHhhhhhcc
Q psy11734        276 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-N---FSGTIMALSNGLGCVSG  351 (817)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~---~~g~a~g~~~~~~~lg~  351 (817)
                            +..+..+..++...+...+ +.........+.+.+.+...+.......+..| +   +|+++.++.+...++|+
T Consensus        82 ------l~~~~~~~~~g~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~  154 (475)
T TIGR00924        82 ------MVLGGIVLMLGHFMLAMSI-YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGS  154 (475)
T ss_pred             ------HHHHHHHHHHHHHHHHhcc-cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHH
Confidence                  7777777777777766544 33333334444455555666666666666554 3   38889999999999999


Q ss_pred             cccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhe
Q psy11734        352 MVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFV  431 (817)
Q Consensus       352 ~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~  431 (817)
                      ++||.+.+.+.++.                                             +|+..|.+.++..+++.+.++
T Consensus       155 ~ig~~l~g~l~~~~---------------------------------------------g~~~~f~~~~~~~~~~~l~~~  189 (475)
T TIGR00924       155 FISPLLAGVIAENY---------------------------------------------GYHVGFNLAAVGMVIGLLTFF  189 (475)
T ss_pred             HHHHHHHHHHHHhc---------------------------------------------ChHHHHHHHHHHHHHHHHHHH
Confidence            99999999887654                                             699999998877777666555


Q ss_pred             eecccccccc-cCC-CC--ch---hHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCcee
Q psy11734        432 LFGSGEVQYW-NES-IL--PA---RYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTV  504 (817)
Q Consensus       432 ~~~~~~~~~~-~~~-~~--~~---~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (817)
                      +..+..++.. +++ ..  +.   ++.......+....                                          
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------  227 (475)
T TIGR00924       190 AGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVF------------------------------------------  227 (475)
T ss_pred             HcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHH------------------------------------------
Confidence            4443221110 000 00  00   00000000000000                                          


Q ss_pred             eecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHH
Q psy11734        505 VSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRF  584 (817)
Q Consensus       505 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~  584 (817)
                                                         ..++..++-.......................+            
T Consensus       228 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  260 (475)
T TIGR00924       228 -----------------------------------FCAWLMHHVVIANILLMTVTLAVIIFFFRLAFK------------  260 (475)
T ss_pred             -----------------------------------HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh------------
Confidence                                               000000000000000000000000000000000            


Q ss_pred             HHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhH----HHHHHHHHHHHHHHHHHHHH
Q psy11734        585 LEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAE----NGVLSALPFLIMWLVSMSSS  660 (817)
Q Consensus       585 l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~----~~~~~~~~~~~~~ig~~~~g  660 (817)
                             +.....+-.|.+.+..+.+...++...+....+.+|.+.++..+.+...    .+++.++..+..++..++..
T Consensus       261 -------~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~  333 (475)
T TIGR00924       261 -------PRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLA  333 (475)
T ss_pred             -------ccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHH
Confidence                   0001111122234455555555666666666677888877754544322    66788888888888887766


Q ss_pred             HHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh--------cCchHHHHHHHHHHHHHHhhhhhhhhhhccccC
Q psy11734        661 ALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV--------GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLS  732 (817)
Q Consensus       661 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (817)
                      ++-.|.+||+.-   .....=..+++++.+++++.+...        ..+.++.+...++.+.+..+..|.......+..
T Consensus       334 ~~~~~l~~~~~~---~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~a  410 (475)
T TIGR00924       334 MIWTRLGRKGKD---PTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIA  410 (475)
T ss_pred             HHHHHHHhCCCC---CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence            665666654210   001111256777776666665531        236677788888888888888888889999998


Q ss_pred             C-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734        733 P-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       733 ~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~  792 (817)
                      | +.||+.+|+......+|..+++.+.....+..+   |...|..++...++..+..+...
T Consensus       411 P~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  468 (475)
T TIGR00924       411 PQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQG---VTGVFGKIGLVTLLVGVVMALMV  468 (475)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---hhhHHHHHHHHHHHHHHHHHHHH
Confidence            8 679999999999999999999999887766643   66777777777777666665553

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00889 2A0110 nucleoside transporter

Probab=99.85  E-value=1.9e-19  Score=201.48  Aligned_cols=266  Identities=10%  Similarity=0.120  Sum_probs=205.2

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCc-hHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--
Q psy11734        515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGG-KHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--  591 (817)
Q Consensus       515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--  591 (817)
                      |+|+|..|.|++.+++.+++.+++++.|+++||+|| |+++.++.+..+++..+..+.+  +++.+++.|++.|++.+  
T Consensus        32 ~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~  109 (418)
T TIGR00889        32 TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVT--TPAGMFPVLLANSLAYMPT  109 (418)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHccH
Confidence            899999999999999999999999999999999965 7789999999999999999998  99999999999888532  


Q ss_pred             ----------------------------------------------------------------------cC--------
Q psy11734        592 ----------------------------------------------------------------------LE--------  593 (817)
Q Consensus       592 ----------------------------------------------------------------------~~--------  593 (817)
                                                                                            ++        
T Consensus       110 ~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~lG~~ig~~l~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~  189 (418)
T TIGR00889       110 IALTNSISYANLPQAGLDVVTDFPPIRVMGTIGFIAAMWAVSLLDIELSNIQLYITAGSSALLGVFALTLPDIPVAKSTA  189 (418)
T ss_pred             HHHHHHHHHHHHhhcCCCchhcCCCeeeehhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhcCCCCCCCcccc
Confidence                                                                                  00        


Q ss_pred             -c--------hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCCh--------hHHHHHHHHHHHHHHHHH
Q psy11734        594 -T--------PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSV--------AENGVLSALPFLIMWLVS  656 (817)
Q Consensus       594 -~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~--------~~~~~~~~~~~~~~~ig~  656 (817)
                       .        +.++++|+|+++...+..++..........+.|.|+++ .|.++        ...+...+...+..+++.
T Consensus       190 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~  268 (418)
T TIGR00889       190 KMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFI  268 (418)
T ss_pred             ccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence             0        01246677887777777777766666677888999877 45443        566888889999999999


Q ss_pred             HHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCch---HHHHHHHHHHHHHHhhhhhhhhhhccccCC
Q psy11734        657 MSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNT---SMVAICFTIGMAFMGFCYASIRVNPIDLSP  733 (817)
Q Consensus       657 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (817)
                      +..|+++||+|+|+.+          ..+.++..++..++.....+.   +..+...++.+...+...+.......|..|
T Consensus       269 ~~~g~l~dr~g~r~~l----------~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p  338 (418)
T TIGR00889       269 LTIPFFLKRFGIKKVM----------LLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVP  338 (418)
T ss_pred             HHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999999988654          466666666555555432222   223333444455445555665677788888


Q ss_pred             -CchHHHHHHHH-HHHHHHHhHHHHHHHHhhcCCcc---ccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        734 -NFSGTIMALSN-GLGCVSGMVAPLTVGFLTQNKTL---LEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       734 -~~~g~~~g~~~-~~~~~g~~i~p~~~g~~~~~~g~---~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                       ++|+++.|+.+ ....+|+.++|.+.|.+.|+.+.   .+|+.+|.+.+++.+++.+.++++-+
T Consensus       339 ~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~  403 (418)
T TIGR00889       339 VHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK  403 (418)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence             78999999997 56788999999999999998753   35999999888888887777766644

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.85  E-value=7e-19  Score=195.03  Aligned_cols=360  Identities=15%  Similarity=0.073  Sum_probs=245.7

Q ss_pred             HHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH
Q psy11734        212 EVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV  291 (817)
Q Consensus       212 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~  291 (817)
                      +++...+...+..++|.|+++ +|.|..+.|+......++..+++++.|+++||.+|++.     .++.+... ..+.. 
T Consensus        13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~-----~~~~~~~~-~~~~~-   84 (382)
T PRK11128         13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIP-----ALRLLALL-TLLFA-   84 (382)
T ss_pred             HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHH-----HHHHHHHH-HHHHH-
Confidence            455556667777789999987 69999999999999999999999999999999998542     11222222 11111 


Q ss_pred             HHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCC
Q psy11734        292 GALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPI  371 (817)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~  371 (817)
                        .......++.+...+...+.+.+.+...+...+...+. +++++.+.+.......+|.++||.+.+.+.++.      
T Consensus        85 --~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~------  155 (382)
T PRK11128         85 --VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF------  155 (382)
T ss_pred             --HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc------
Confidence              12222233444444444434444444555444444444 456788888888888999999999999998875      


Q ss_pred             CCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHH
Q psy11734        372 DLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYV  451 (817)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  451 (817)
                                                             +|+..|++.++..++..+...+. ++++++ +++       
T Consensus       156 ---------------------------------------g~~~~f~~~~~~~~~~~~~~~~~-~~~~~~-~~~-------  187 (382)
T PRK11128        156 ---------------------------------------GEQAILWILTAGVASMLLGQLLR-PTIMPQ-GES-------  187 (382)
T ss_pred             ---------------------------------------ChhHHHHHHHHHHHHHHHHHHcc-CCCCCc-ccc-------
Confidence                                                   69999988776555544433322 211100 000       


Q ss_pred             HHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHH
Q psy11734        452 LGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFY  531 (817)
Q Consensus       452 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~  531 (817)
                                                                                     +-+..+           
T Consensus       188 ---------------------------------------------------------------~~~~~~-----------  193 (382)
T PRK11128        188 ---------------------------------------------------------------RQQESA-----------  193 (382)
T ss_pred             ---------------------------------------------------------------cccccc-----------
Confidence                                                                           000000           


Q ss_pred             HHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHH
Q psy11734        532 YGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIIS  611 (817)
Q Consensus       532 ~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~  611 (817)
                                                                                  ...++++++|+|++|.....
T Consensus       194 ------------------------------------------------------------~~~~~~~i~~~~~~~~~~~~  213 (382)
T PRK11128        194 ------------------------------------------------------------GWPAWKALLKEPTVWRFLLC  213 (382)
T ss_pred             ------------------------------------------------------------ccchHHHHHcChhHHHHHHH
Confidence                                                                        01235678899999998888


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHH
Q psy11734        612 EVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGV  691 (817)
Q Consensus       612 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~  691 (817)
                      .++.........++.|.|+++ .|.+..+.+.+.+...+..++..+..|++.||+++|+.+          ..+....++
T Consensus       214 ~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l----------~~~~~~~~~  282 (382)
T PRK11128        214 VSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLL----------LLSAICGVV  282 (382)
T ss_pred             HHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH----------HHHHHHHHH
Confidence            888888888888899999976 799999999999988899999999999999999987643          356666666


Q ss_pred             HHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHH-HHHHHhHHHHHHHHhhcCCccccH
Q psy11734        692 GALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGL-GCVSGMVAPLTVGFLTQNKTLLEW  770 (817)
Q Consensus       692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~i~p~~~g~~~~~~g~~~~  770 (817)
                      ..+++...+ +.+......++.+++.+...+.......+..++++++..++.+.. ...|..++|.+.|.+.|..+   +
T Consensus       283 ~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g---~  358 (382)
T PRK11128        283 RWGLMGSTT-ALPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG---A  358 (382)
T ss_pred             HHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---H
Confidence            655555543 556555566666666666566666666666666778889988744 45677999999999999985   3


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy11734        771 RVVFWIMFLTLFISNV  786 (817)
Q Consensus       771 ~~~~~~~~~~~~i~~~  786 (817)
                       ..++..+++.+++..
T Consensus       359 -~~~~~~~~~~~~~~~  373 (382)
T PRK11128        359 -GVFWVMALVALPALF  373 (382)
T ss_pred             -HHHHHHHHHHHHHHH
Confidence             456666666555443

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.84  E-value=1.6e-18  Score=193.62  Aligned_cols=372  Identities=15%  Similarity=0.105  Sum_probs=236.9

Q ss_pred             HHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH-----hhcCcccchhhHHHHHH
Q psy11734        209 IISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF-----IARDILSRTNVRKVFAT  283 (817)
Q Consensus       209 ~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-----g~r~~~~~~~~~~~~~~  283 (817)
                      ...++.++....-...-+|.|+++ .|+|.++.|+.......  .+..+++|+++||+     ||||.         .+.
T Consensus         5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~---------~l~   72 (402)
T PRK11902          5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRG---------WLL   72 (402)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchh---------HHH
Confidence            445566666666677889999998 59999999988665554  58899999999999     66653         255


Q ss_pred             HHhHHHHHHHHhhhccCC--ChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccce
Q psy11734        284 LGAVLPGVGALAASYVGC--NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGF  360 (817)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~  360 (817)
                      .+..+.++++..+.+.++  +.+.......+..++.....+...+...|..| |+|+++.++......+|..+++.+.+.
T Consensus        73 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~  152 (402)
T PRK11902         73 LTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW  152 (402)
T ss_pred             HHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH
Confidence            666666655555555432  23333333233344444555556666777665 679999999998888899988888776


Q ss_pred             ecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734        361 LTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY  440 (817)
Q Consensus       361 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~  440 (817)
                      +.+..                                            .+|+..|++.+++.++..+...+. ++++++
T Consensus       153 l~~~~--------------------------------------------~gw~~~f~i~a~~~l~~~l~~~~~-~e~~~~  187 (402)
T PRK11902        153 LADRV--------------------------------------------LGWGNTYLLMAGLMLAGALTTLWA-PEPEVP  187 (402)
T ss_pred             HHhcc--------------------------------------------cCHHHHHHHHHHHHHHHHHHHHhc-CCCccc
Confidence            65532                                            169999999888776655543332 221110


Q ss_pred             ccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCCh
Q psy11734        441 WNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDE  520 (817)
Q Consensus       441 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  520 (817)
                       +++  +                                                                   + +  .
T Consensus       188 -~~~--~-------------------------------------------------------------------~-~--~  194 (402)
T PRK11902        188 -ARP--P-------------------------------------------------------------------R-S--L  194 (402)
T ss_pred             -ccc--c-------------------------------------------------------------------c-h--h
Confidence             000  0                                                                   0 0  0


Q ss_pred             hhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhh
Q psy11734        521 RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAIL  600 (817)
Q Consensus       521 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l  600 (817)
                      .                             |.                 .                      .+++++++
T Consensus       195 ~-----------------------------~~-----------------~----------------------~~~~~~l~  206 (402)
T PRK11902        195 G-----------------------------EA-----------------V----------------------VGPLRDFF  206 (402)
T ss_pred             H-----------------------------HH-----------------H----------------------HHHHHHHH
Confidence            0                             00                 0                      02356788


Q ss_pred             cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcccccccchhhH
Q psy11734        601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF-LIMWLVSMSSSALADYLIVRDILSRTNVRK  679 (817)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~  679 (817)
                      |+|.++...+..++..........+.+.++.+++|+++++.+.+....+ ++.+++.+++|++.||+++|+.+       
T Consensus       207 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l-------  279 (402)
T PRK11902        207 SRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL-------  279 (402)
T ss_pred             hCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH-------
Confidence            8998888777777766655555556677788878999999998876654 56899999999999999987542       


Q ss_pred             HHHHHHHHHHHHHHH---HHHhhcCchHHHHHHHHHHHHH----HhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHh
Q psy11734        680 VFATLGAVLPGVGAL---AASYVGCNTSMVAICFTIGMAF----MGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGM  752 (817)
Q Consensus       680 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~  752 (817)
                         ..+..+..+..+   .+...+++.+.......+..+.    .+..+.......++..|   ++..+..+....++..
T Consensus       280 ---~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~  353 (402)
T PRK11902        280 ---MLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS---ATQYALLSALASVGRV  353 (402)
T ss_pred             ---HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHH
Confidence               223332222222   2223332334333333322222    22333334445555555   3345566666667777


Q ss_pred             HHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734        753 VAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSG  794 (817)
Q Consensus       753 i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~  794 (817)
                      +++.+.|.+.|..|   |+..|...+++.+++.+..+..+++
T Consensus       354 ~~~~~~G~l~~~~G---~~~~f~~~~~~~~~~~~~~~~~~~~  392 (402)
T PRK11902        354 YVGPTSGYLVEAYG---WPGFYLMTVVIALPGLALLWLMRGT  392 (402)
T ss_pred             HHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            67778999999986   8888988888888877666554333

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.84  E-value=6.3e-21  Score=211.40  Aligned_cols=278  Identities=15%  Similarity=0.131  Sum_probs=198.6

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.|...+....++.|++|++||++++++...+..+|..+++++++++.+ ..|||++|++.+++.++..+..+
T Consensus        97 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~  175 (382)
T PRK10091         97 GRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ-EFSWRYTFLLIAVFNIAVLASIY  175 (382)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh-hccHHHHHHHHHHHHHHHHHHHH
Confidence            38899999999999999999999999999999999999999999999999999999 89999999999887777766655


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +.+||.+++++   .+.                                                               
T Consensus       176 ~~lp~~~~~~~---~~~---------------------------------------------------------------  189 (382)
T PRK10091        176 FWVPDIRDEAK---GGL---------------------------------------------------------------  189 (382)
T ss_pred             HhCCCCCcccc---cCH---------------------------------------------------------------
Confidence            55555322110   000                                                               


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                      + +..+.+|++..+...+..++.....+....++|.++++.+|+++.+
T Consensus       190 --------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~  236 (382)
T PRK10091        190 --------------------------------R-EQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETS  236 (382)
T ss_pred             --------------------------------H-HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence                                            0 0123466777777666666666666666777888888888999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHh-hh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFM-GF  319 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-g~  319 (817)
                      .+.+..+..+++.+++++.|++.||+++|+.          ...+..+.+++.+.+....++.+.......+...+. +.
T Consensus       237 ~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~----------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  306 (382)
T PRK10091        237 MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI----------AAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFAL  306 (382)
T ss_pred             HHHHHHHHHHHHHHHhHHHheeccccCchhH----------HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999998875          555555555555444333323333333222222222 22


Q ss_pred             ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccc
Q psy11734        320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPL  398 (817)
Q Consensus       320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (817)
                      ..+.......+.+| +.++.+  ..+...++|+++||.+.|.+.|..+                                
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~--------------------------------  352 (382)
T PRK10091        307 SAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGL--------------------------------  352 (382)
T ss_pred             hHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHccc--------------------------------
Confidence            22222233334433 455554  3467788999999999999998753                                


Q ss_pred             cccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734        399 TVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG  434 (817)
Q Consensus       399 ~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~  434 (817)
                                  +|+..+.+.+++.+++......+.
T Consensus       353 ------------~~~~~~~~~~~~~~~~~~~~~~~~  376 (382)
T PRK10091        353 ------------AYNYVALPAALLSFAAMSSLLLYG  376 (382)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHHh
Confidence                        688888888877776664444333

>TIGR00897 2A0118 polyol permease family

Probab=99.84  E-value=2.5e-20  Score=208.13  Aligned_cols=285  Identities=15%  Similarity=0.109  Sum_probs=203.6

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhH-HHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGS-VLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~-~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~   79 (817)
                      .|+++|+|.+...+...+.+.+++|+|||++++|+.+++.++|. .++|++++++.+ ..||+..+|......++..++.
T Consensus       111 ~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~  189 (402)
T TIGR00897       111 FYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP-AFGEMNTLWSALAFVLTGGVIA  189 (402)
T ss_pred             HHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHHHHHH
Confidence            37889999998888888899999999999999999999999997 689999999998 8897777666544444444444


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      +++.++++++++. +++++                   +++                                       
T Consensus       190 ~~~~~~~~~~~~~-~~~~~-------------------~~~---------------------------------------  210 (402)
T TIGR00897       190 LFSNKDIFTPQHM-QTREK-------------------FSE---------------------------------------  210 (402)
T ss_pred             HhccCCCCCcccc-cCCcc-------------------hhh---------------------------------------
Confidence            4555554321110 00000                   000                                       


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                                                      .+.++++++|||+++...+..++.....++..+|.|.|+++ +|++..
T Consensus       211 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~  257 (402)
T TIGR00897       211 --------------------------------LGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTS  257 (402)
T ss_pred             --------------------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChh
Confidence                                            01235678999999998888888888999999999999876 899999


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhh---c-cCCChhHHHHHHHHHHH
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAAS---Y-VGCNTSMVAIFFTIGMA  315 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~l~~~  315 (817)
                      +.+.+.....+++.++++..|+++||+++|+.         ....+.....+....+.   . ..++.........+.+.
T Consensus       258 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~---------~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~  328 (402)
T TIGR00897       258 EWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT---------VRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGI  328 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH---------HHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHH
Confidence            99998888999999999999999999998774         11222222222211211   1 12233333333333333


Q ss_pred             HhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccc
Q psy11734        316 FMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMV  395 (817)
Q Consensus       316 ~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (817)
                      +.+...+ ......+.+|++||+++|+.|...++|+.++|.+.|.+.|..                              
T Consensus       329 ~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~------------------------------  377 (402)
T TIGR00897       329 FLAGYVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF------------------------------  377 (402)
T ss_pred             HHHHHHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------------------------------
Confidence            3333333 234456788899999999999999999999999999998875                              


Q ss_pred             ccccccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734        396 APLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF  433 (817)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~  433 (817)
                                     ++...|++.+++.+++.++..|.
T Consensus       378 ---------------g~~~~~~~~a~~~~i~~~~~~~~  400 (402)
T TIGR00897       378 ---------------GAIGVVWIFAALYVVSAFLTAFI  400 (402)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHHHh
Confidence                           58889999988888777766554

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK10504 putative transporter; Provisional

Probab=99.84  E-value=1.7e-20  Score=214.12  Aligned_cols=309  Identities=13%  Similarity=0.052  Sum_probs=207.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|+|.+...|...+.+.|++|+++|+++.++......+|..+||++++.+.+ ..|||+.|++..++..+..+...
T Consensus       104 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~-~~gw~~~f~~~~~~~~l~~~~~~  182 (471)
T PRK10504        104 ARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE-YASWHWIFLINIPVGIIGAIATL  182 (471)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHH
Confidence            38899999999999999999999999999999999999999999999999999999 89999999999888877776666


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhcccc--ccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAA--ERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGF  158 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (817)
                      ...|++++++++.+..............  ...+++..+|                              ....+.....
T Consensus       183 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~  232 (471)
T PRK10504        183 MLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGL------------------------------SPLAIAGLVA  232 (471)
T ss_pred             HhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCc------------------------------chHHHHHHHH
Confidence            6655544333222221111000000000  0000000001                              0011111111


Q ss_pred             HHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcc
Q psy11734        159 LSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSV  238 (817)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~  238 (817)
                      ......+.                ...++.+++++....+++|||++....+..++..........+.|.|++..+|.++
T Consensus       233 ~~~~~~~~----------------~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  296 (471)
T PRK10504        233 VGVVALLL----------------YLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSP  296 (471)
T ss_pred             HHHHHHHH----------------HHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence            11111111                11111111122223468999999999888888888877777889999998889999


Q ss_pred             cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCC-Ch-hHHHHHHHHHHHH
Q psy11734        239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGC-NT-SMVAIFFTIGMAF  316 (817)
Q Consensus       239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~~~~  316 (817)
                      .++++...+..++..++.++.|++.||+++|+.          ...+..+..+....+..... ++ ........+.+.+
T Consensus       297 ~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  366 (471)
T PRK10504        297 FHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRV----------LVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMV  366 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH----------HHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999885          55566655555444444322 22 2222223333344


Q ss_pred             hhhccccccccc-cccCCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        317 MGFCYASIRVNP-IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       317 ~g~~~~~~~~~~-~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      .+...+...... +..++++++.++|+.++.+.+|.++|+.+.|.+.+..+
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g  417 (471)
T PRK10504        367 NSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG  417 (471)
T ss_pred             HHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            444444444444 44556899999999999999999999999999998865

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.84  E-value=1.2e-19  Score=207.76  Aligned_cols=308  Identities=13%  Similarity=0.153  Sum_probs=208.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734        445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG  524 (817)
Q Consensus       445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g  524 (817)
                      +.++.+.+.+++.++.+...+|...+++..|.+.+                           ..++...+++++++.+.+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~   58 (479)
T PRK10077          6 NSSYIFSITLVATLGGLLFGYDTAVISGTVESLNT---------------------------VFVAPQNLSESAANSLLG   58 (479)
T ss_pred             cchHHHHHHHHHHHHHHhcCcccceehHhHHHHHH---------------------------HhcccccccccCChhHHH
Confidence            34566777888888999999999999988877665                           112234446799999999


Q ss_pred             HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHh---------h-hcchHHHHHHHHHHhhhcc---
Q psy11734        525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI---------A-HSGPVSMTVLRFLEGVGED---  591 (817)
Q Consensus       525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a---------~-~~s~~~l~~~R~l~Gig~~---  591 (817)
                      ++.+++.+++.+++++.|+++||+|||+++.++.++++++.++++++         + ...++.+++.|+++|++.|   
T Consensus        59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~  138 (479)
T PRK10077         59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLAS  138 (479)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHh
Confidence            99999999999999999999999999999999999999999988874         1 1135678999999999998   


Q ss_pred             ----------------------------------------------------------------------------cCch
Q psy11734        592 ----------------------------------------------------------------------------LETP  595 (817)
Q Consensus       592 ----------------------------------------------------------------------------~~~~  595 (817)
                                                                                                  .+.+
T Consensus       139 ~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~  218 (479)
T PRK10077        139 MLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETP  218 (479)
T ss_pred             hHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence                                                                                        0000


Q ss_pred             -h------------------------------HHhhcC-----HhHHHH-----H----HHHHHHHHHHHHHHhhHHHHH
Q psy11734        596 -W------------------------------AAILSS-----LPVWSL-----I----ISEVGHDYGFYLISSDLPKYM  630 (817)
Q Consensus       596 -~------------------------------~~~l~~-----~~~~~~-----~----~~~~~~~~~~~~~~~~~p~~l  630 (817)
                       +                              ++.+++     +..+..     .    ...+......+....+.|.++
T Consensus       219 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~  298 (479)
T PRK10077        219 RYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF  298 (479)
T ss_pred             HHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence             0                              000000     000000     0    000111111223345567666


Q ss_pred             HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh--cCch-HHHH
Q psy11734        631 SQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV--GCNT-SMVA  707 (817)
Q Consensus       631 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~  707 (817)
                      ++ .|.+...........++...++.++.++++||+|||+.+          ..+..+.+++++.+...  .... ....
T Consensus       299 ~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~----------i~~~~~~~v~~~~l~~~~~~~~~~~~~~  367 (479)
T PRK10077        299 KT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ----------IIGALGMAIGMFSLGTAFYTQAPGIVAL  367 (479)
T ss_pred             HH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH----------HHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence            65 788877777777788899999999999999999987643          45566666655554332  1111 2222


Q ss_pred             HHHHHHHHHHhh-hhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhh------cCCccccHHHHHHHHHH
Q psy11734        708 ICFTIGMAFMGF-CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT------QNKTLLEWRVVFWIMFL  779 (817)
Q Consensus       708 ~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~------~~~g~~~~~~~~~~~~~  779 (817)
                      ....+..++.+. ..+..+...+|.+| ++|+++.|+.+..+++++.+++.+.+.+.      |..+   +...|++.++
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~  444 (479)
T PRK10077        368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH---NGFSYWIYGC  444 (479)
T ss_pred             HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc---CccHHHHHHH
Confidence            222222222222 23555688888888 78999999999999999999987776554      3333   5567777777


Q ss_pred             HHHHHHHHHHHhcc
Q psy11734        780 TLFISNVFFVLFGS  793 (817)
Q Consensus       780 ~~~i~~~~~~~~~~  793 (817)
                      ..+++.+..+++.+
T Consensus       445 ~~~~~~~~~~~~~~  458 (479)
T PRK10077        445 MGVLAALFMWKFVP  458 (479)
T ss_pred             HHHHHHHHHHhccc
Confidence            76666666555533

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.84  E-value=1.6e-19  Score=206.22  Aligned_cols=300  Identities=16%  Similarity=0.154  Sum_probs=206.1

Q ss_pred             HHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHH
Q psy11734        452 LGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFY  531 (817)
Q Consensus       452 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~  531 (817)
                      ...++.++.+...+|...++...|.+..+.+.                           +...+.+.+..+.+++.+++.
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~   81 (481)
T TIGR00879        29 LSLIAAIGGLMFGYDTGVIGGALALPAFEFKF---------------------------TSANSDSYSSSLWGLVVSIFL   81 (481)
T ss_pred             HHHHHHHHHHhcccccchhhhhhhcHHHHHhc---------------------------CCcccCCCChhHHHHHHHHHH
Confidence            34455556677788888899888887770000                           000022245899999999999


Q ss_pred             HHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHHHHHhhhcc-------------------
Q psy11734        532 YGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA-HSGPVSMTVLRFLEGVGED-------------------  591 (817)
Q Consensus       532 ~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~-~~s~~~l~~~R~l~Gig~~-------------------  591 (817)
                      +++.+++++.|+++||+|||+++.++.++++++.+++.+.+ ..+++.+++.|+++|+|.+                   
T Consensus        82 ~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r  161 (481)
T TIGR00879        82 VGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALR  161 (481)
T ss_pred             HHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhh
Confidence            99999999999999999999999999999999999997754 1245689999999999988                   


Q ss_pred             -------------------------------------------------------cCchh--------------------
Q psy11734        592 -------------------------------------------------------LETPW--------------------  596 (817)
Q Consensus       592 -------------------------------------------------------~~~~~--------------------  596 (817)
                                                                             .+.+.                    
T Consensus       162 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  241 (481)
T TIGR00879       162 GALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRG  241 (481)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhC
Confidence                                                                   00000                    


Q ss_pred             ------------------------------HHhhc------CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhH
Q psy11734        597 ------------------------------AAILS------SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAE  640 (817)
Q Consensus       597 ------------------------------~~~l~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  640 (817)
                                                    ++.++      .+.++...+..+........+..+.|.++++ .|++..+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~  320 (481)
T TIGR00879       242 TSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDH  320 (481)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchH
Confidence                                          00000      1111222222222222333445566766655 7999988


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHH---hhcCc------hHHHHHHHH
Q psy11734        641 NGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAAS---YVGCN------TSMVAICFT  711 (817)
Q Consensus       641 ~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~  711 (817)
                      .+.......++.+++.++.|+++||++||+.+          ..++.+..++++++.   ....+      .........
T Consensus       321 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (481)
T TIGR00879       321 AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL----------LIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFIL  390 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHH
Confidence            88999999999999999999999999987653          344555555544444   11111      222222222


Q ss_pred             HHHHHHh-hhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHH
Q psy11734        712 IGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFV  789 (817)
Q Consensus       712 ~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~  789 (817)
                      +...+.+ ...+.......|..| +.|+++.|+.+...+++++++|.+.+.+.++.+   |+..|++.+++++++.+..+
T Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~---~~~~f~~~~~~~~~~~i~~~  467 (481)
T TIGR00879       391 LFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG---VGGVFIFFGGLNVLGLIFVY  467 (481)
T ss_pred             HHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---ccceehhHHHHHHHHHHHHh
Confidence            2222222 233444566688888 679999999999999999999999999998865   77888888888887777666


Q ss_pred             Hhc
Q psy11734        790 LFG  792 (817)
Q Consensus       790 ~~~  792 (817)
                      +..
T Consensus       468 ~~~  470 (481)
T TIGR00879       468 FFL  470 (481)
T ss_pred             eec
Confidence            543

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.84  E-value=1.2e-20  Score=211.03  Aligned_cols=285  Identities=18%  Similarity=0.125  Sum_probs=202.4

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...|...+++.|++|+|+|++++++.+.+..+|..+++.+++.+.+ ..+||+.|++.+.+.++..++..
T Consensus       109 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  187 (406)
T PRK11551        109 ARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG-DAAWRHIFYVGGVGPLLLVPLLM  187 (406)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-ccCHHHHHHHHHHHHHHHHHHHH
Confidence            38899999999999999999999999999999999999999999999999999888 89999999998877676666666


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +++||+|+.++..++++              ++                                               
T Consensus       188 ~~l~~~~~~~~~~~~~~--------------~~-----------------------------------------------  206 (406)
T PRK11551        188 RWLPESRAFAQAAGAGK--------------QR-----------------------------------------------  206 (406)
T ss_pred             HhCCCChhHHhccCcch--------------hh-----------------------------------------------
Confidence            66666543211000000              00                                               


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHh---hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAIL---YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLS  237 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s  237 (817)
                                                      +.....++   +++..+...+..++.....+....|.|.|+++ +|++
T Consensus       207 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s  253 (406)
T PRK11551        207 --------------------------------APVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLS  253 (406)
T ss_pred             --------------------------------hhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCC
Confidence                                            00011111   12233344445555566777788899999987 6999


Q ss_pred             ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHh
Q psy11734        238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFM  317 (817)
Q Consensus       238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  317 (817)
                      +.+.+.......++..+++++.|+++||.++|+.          ...+.....+++..+...+ +.........+.+++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~  322 (406)
T PRK11551        254 RSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRV----------VLLIYAGILASLAALAAAP-SFAGMLLAGFAAGLFV  322 (406)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH----------HHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999998875          4444444444444444433 3333322223333333


Q ss_pred             hhccccccccccccC-CCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734        318 GFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA  396 (817)
Q Consensus       318 g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (817)
                      ....+.......+.. +++|+++.|+.+...++|+.++|.+.|.+.|+.+                              
T Consensus       323 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~------------------------------  372 (406)
T PRK11551        323 VGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR------------------------------  372 (406)
T ss_pred             HhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC------------------------------
Confidence            333344455555654 4899999999999999999999999999988643                              


Q ss_pred             cccccccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734        397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS  435 (817)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~  435 (817)
                                    ++...+++...+.+++.++.++..+
T Consensus       373 --------------~~~~~~~~~~~~~~~~~~~~~~~~~  397 (406)
T PRK11551        373 --------------STVGVIGASIPVILVAALAALLLVS  397 (406)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHHHhc
Confidence                          5777787777777776666555443

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.84  E-value=9.1e-19  Score=194.55  Aligned_cols=376  Identities=10%  Similarity=0.024  Sum_probs=249.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734        202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF  281 (817)
Q Consensus       202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~  281 (817)
                      +|+++...+..++...+-.......|.+.++ ++.++.+.+++.....++..+..++.|+++||++||++          
T Consensus         2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~v----------   70 (393)
T PRK11195          2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRV----------   70 (393)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchh----------
Confidence            4667777777777776665565656666544 68888899999999999999999999999999999996          


Q ss_pred             HHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccce
Q psy11734        282 ATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGF  360 (817)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~  360 (817)
                      +..+..+.+++.+.+.... +.   .....+.+.+.+...+...+...|..| |+|++++|+.+...+++..+||.++|.
T Consensus        71 l~~~~~~~~~~~~~~~~~~-~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~  146 (393)
T PRK11195         71 MFIANGIKLLGCLLMLFGI-HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA  146 (393)
T ss_pred             hHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5666665555444433322 22   223334455666667777777777666 799999999999999999999999998


Q ss_pred             ecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734        361 LTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY  440 (817)
Q Consensus       361 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~  440 (817)
                      +.+.                                              .|+..+.+.+++.+++.+....+++++++ 
T Consensus       147 l~~~----------------------------------------------~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-  179 (393)
T PRK11195        147 LADP----------------------------------------------HAEAALAVCALIYLLAALFNLFIPRLGAR-  179 (393)
T ss_pred             HHHH----------------------------------------------HHHHHHHHHHHHHHHHHHHHhcCCCCccc-
Confidence            7764                                              25666666655554444443333322111 


Q ss_pred             ccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCCh
Q psy11734        441 WNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDE  520 (817)
Q Consensus       441 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  520 (817)
                       +++ .                                                                    +.+  +
T Consensus       180 -~~~-~--------------------------------------------------------------------~~~--~  187 (393)
T PRK11195        180 -RPG-Q--------------------------------------------------------------------SWN--P  187 (393)
T ss_pred             -ccc-c--------------------------------------------------------------------CCC--H
Confidence             000 0                                                                    000  0


Q ss_pred             hhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhh
Q psy11734        521 RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAIL  600 (817)
Q Consensus       521 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l  600 (817)
                      .                              +.             ...+.                      +++++++
T Consensus       188 ~------------------------------~~-------------~~~~~----------------------~~~~~l~  202 (393)
T PRK11195        188 I------------------------------AL-------------LRDFF----------------------HACRVLW  202 (393)
T ss_pred             H------------------------------HH-------------HHHHH----------------------HHHHHHH
Confidence            0                              00             00000                      1134556


Q ss_pred             cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHH
Q psy11734        601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV  680 (817)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~  680 (817)
                      ++|.+........+............|.|+++.+|.++.+.+...+...++.+++.+..+++.||.++++.+        
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~--------  274 (393)
T PRK11195        203 RDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL--------  274 (393)
T ss_pred             hCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH--------
Confidence            667665555554455555666667788899988999999999999999999999999999999988876543        


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCc--hHHHHHHHHHHHHHHHhHHHHHH
Q psy11734        681 FATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNF--SGTIMALSNGLGCVSGMVAPLTV  758 (817)
Q Consensus       681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~i~p~~~  758 (817)
                        ..+.. .++..+.+...+ +.+......++.+++.+...++..+..++..|++  +|++.++.|..++++..++..+.
T Consensus       275 --~~g~~-~~~~~~~~~~~~-~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~  350 (393)
T PRK11195        275 --PAGIL-MGLVVLLMALQH-SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY  350 (393)
T ss_pred             --HHHHH-HHHHHHHHHHHh-HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH
Confidence              23332 223333333332 4444444555556666665666666677777653  69999999999999999999999


Q ss_pred             HHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734        759 GFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       759 g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~  792 (817)
                      +.+ +..+   -+..+...++..+++....+.++
T Consensus       351 ~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~  380 (393)
T PRK11195        351 SLL-VKLG---VPVVAVIVGFGLLVALAMALLWR  380 (393)
T ss_pred             HHH-HHcC---CCHHHHHHHHHHHHHHHHHHHHH
Confidence            865 5544   45566666665556665555553

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.84  E-value=1.7e-20  Score=207.33  Aligned_cols=278  Identities=15%  Similarity=0.126  Sum_probs=206.2

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchh--HHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFM--TALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~--~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~   79 (817)
                      |+++|.+.+...|...+++.|+.|+++|.++  .+......++|.++||++++++.+ ..|||+.|++.+++.++..++.
T Consensus        94 ~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~~~~~~f~~~~~~~~~~~~~~  172 (375)
T TIGR00899        94 GVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL-GFGFTVMFLTAALAFVLCGVLV  172 (375)
T ss_pred             HHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-hcccHHHHHHHHHHHHHHHHHH
Confidence            6778888888889999999999988877755  688888899999999999999999 8999999999998888777777


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      ++++||+|+.++.   ++.                                                             
T Consensus       173 ~~~~~~~~~~~~~---~~~-------------------------------------------------------------  188 (375)
T TIGR00899       173 WLFLPSYPRGAPG---ALT-------------------------------------------------------------  188 (375)
T ss_pred             HHhCCCcccCccc---ccC-------------------------------------------------------------
Confidence            7767765432110   000                                                             


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                                                       +.+.++.+++|+++......++..........+.|.|+++.+|.++.
T Consensus       189 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  235 (375)
T TIGR00899       189 ---------------------------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDK  235 (375)
T ss_pred             ---------------------------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHH
Confidence                                             00123356667666665555555555566677889999888999999


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~  319 (817)
                      +.+.+.........++.++.|++.||+++|+.          ...+..+..+........+ +.+.......+.+.+.+.
T Consensus       236 ~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~  304 (375)
T TIGR00899       236 LAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRL----------MLLAALAGVAFYTGLAADN-SLWALLMLQLLNAIFIGI  304 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHhcchhH----------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence            99988877777888899999999999998875          4444444444433333322 333333344444444555


Q ss_pred             ccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734        320 CYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  399 (817)
Q Consensus       320 ~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (817)
                      ..+......+|..|+++++++++.+...++|.+++|.+.|.+.|..                                  
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~----------------------------------  350 (375)
T TIGR00899       305 LAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERW----------------------------------  350 (375)
T ss_pred             HHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------------------------
Confidence            5555566777888888899999999999999999999999888764                                  


Q ss_pred             ccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734        400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF  433 (817)
Q Consensus       400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~  433 (817)
                                 +|+..|++.+++.+++.++..+.
T Consensus       351 -----------g~~~~~~~~~~~~~~~~~~~~~~  373 (375)
T TIGR00899       351 -----------SYHAVYWFAIVMLIVALFCLLLI  373 (375)
T ss_pred             -----------cchhHHHHHHHHHHHHHHHHhee
Confidence                       58889999998888888776654

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR00895 2A0115 benzoate transport

Probab=99.84  E-value=1.4e-19  Score=201.50  Aligned_cols=377  Identities=16%  Similarity=0.138  Sum_probs=237.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHH
Q psy11734        205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATL  284 (817)
Q Consensus       205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~  284 (817)
                      +....+..+...........+.|.+.++ +|.+..+.+++.....++..++.++.|+++||+|||+.          ...
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~----------~~~   87 (398)
T TIGR00895        19 IILSFLIMLMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRV----------LLW   87 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHH----------HHH
Confidence            3344444455555555666667766655 79999999999999999999999999999999999885          566


Q ss_pred             HhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecc
Q psy11734        285 GAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  363 (817)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~  363 (817)
                      +..+..++.......+ +.....+...+.+.+.+...+.......|..| ++|+++.++.+....+|..+++.+.+.+.+
T Consensus        88 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~  166 (398)
T TIGR00895        88 SILLFSVFTLLCALAT-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP  166 (398)
T ss_pred             HHHHHHHHHHHHHHcc-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh
Confidence            6666666655555543 44445555555555566666666777777766 789999999999999999999999888776


Q ss_pred             cccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccC
Q psy11734        364 NIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNE  443 (817)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~  443 (817)
                      +.                                             +|+..|++.+++..+..++...+.++.++...+
T Consensus       167 ~~---------------------------------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (398)
T TIGR00895       167 VF---------------------------------------------GWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVS  201 (398)
T ss_pred             cc---------------------------------------------cceeehhhhhhHHHHHHHHHHHhCCCCChHHHh
Confidence            54                                             578888887655554444333333332211111


Q ss_pred             CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734        444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ  523 (817)
Q Consensus       444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  523 (817)
                      +..+.....         ....+.        ...+        +.        ++    ..+++    .++-   +.  
T Consensus       202 ~~~~~~~~~---------~~~~~~--------~~~~--------~~--------~~----~~~~~----~~~~---~~--  235 (398)
T TIGR00895       202 KRPETVRRI---------VNAIAP--------QMQA--------EA--------QS----ALPEQ----KATQ---GT--  235 (398)
T ss_pred             cCHHHHHHH---------HHHHHH--------hccc--------cc--------cc----ccccc----cccc---ch--
Confidence            100000000         000000        0000        00        00    00000    0000   00  


Q ss_pred             HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCH
Q psy11734        524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSL  603 (817)
Q Consensus       524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~  603 (817)
                                                .|..                  .                     ...++..+.+
T Consensus       236 --------------------------~~~~------------------~---------------------~~~~~~~~~~  250 (398)
T TIGR00895       236 --------------------------KRSV------------------F---------------------KALFQGKTAR  250 (398)
T ss_pred             --------------------------hhHH------------------H---------------------HHHhcchhHH
Confidence                                      0000                  0                     0001111223


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHH
Q psy11734        604 PVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFAT  683 (817)
Q Consensus       604 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~  683 (817)
                      ..+......++.....+....|.| ++.+..|.++.+.+.......++.+++.++.|+++||+++|..           .
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------~  318 (398)
T TIGR00895       251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT-----------A  318 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH-----------H
Confidence            444455555666677777888899 5555589999999999999999999999999999999997632           1


Q ss_pred             HHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHh
Q psy11734        684 LGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL  761 (817)
Q Consensus       684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~  761 (817)
                      ....+..+...++.....+.+......++.+++.+...+...+...|..| ++|+++.|+.+.+..+|+.++|.+.|.+
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l  397 (398)
T TIGR00895       319 LLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL  397 (398)
T ss_pred             HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence            22222222222222222245555555566666667777777888888888 7899999999999999999999999875

>TIGR00896 CynX cyanate transporter

Probab=99.84  E-value=3e-19  Score=196.00  Aligned_cols=331  Identities=18%  Similarity=0.105  Sum_probs=227.1

Q ss_pred             HhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCC
Q psy11734        222 ISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGC  301 (817)
Q Consensus       222 ~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (817)
                      ....+|.+.++ +|.|..+.|+..+...++..+++++.|+++||+|+|+.          +..+..+..++.... .. +
T Consensus        19 ~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~----------~~~~~~~~~~~~~~~-~~-~   85 (355)
T TIGR00896        19 VGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERS----------VAAGLLLIAAGILIR-SA-P   85 (355)
T ss_pred             CcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHH----------HHHHHHHHHHHHHHH-Hh-c
Confidence            34556665554 89999999999999999999999999999999999986          555655555554444 32 3


Q ss_pred             ChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccch
Q psy11734        302 NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTI  381 (817)
Q Consensus       302 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~  381 (817)
                      +.........+.+.+.+...+.......+..|++|+++.+..+....+|..+++.+.+.+.+..+               
T Consensus        86 ~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~---------------  150 (355)
T TIGR00896        86 GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSG---------------  150 (355)
T ss_pred             cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------
Confidence            44444444444444444444445556677778899999999999999999999998887765431               


Q ss_pred             hhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHHHHH
Q psy11734        382 MALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVT  461 (817)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~  461 (817)
                                                  .+|+..|.+.+++.++.....  ..+.++++  ++                 
T Consensus       151 ----------------------------~~w~~~f~~~~~~~~~~~~~~--~~~~~~~~--~~-----------------  181 (355)
T TIGR00896       151 ----------------------------GHWQQALAWWALPALLALLAW--IPQVRRRV--AA-----------------  181 (355)
T ss_pred             ----------------------------hhHHHHHHHHHHHHHHHHHHH--hhhhcccc--CC-----------------
Confidence                                        148988887766554433222  11111000  00                 


Q ss_pred             HHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhc
Q psy11734        462 LALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPG  541 (817)
Q Consensus       462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~  541 (817)
                                       +                                   +-  +.                     
T Consensus       182 -----------------~-----------------------------------~~--~~---------------------  186 (355)
T TIGR00896       182 -----------------N-----------------------------------QT--TT---------------------  186 (355)
T ss_pred             -----------------C-----------------------------------CC--CC---------------------
Confidence                             0                                   00  00                     


Q ss_pred             hhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHH
Q psy11734        542 GILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYL  621 (817)
Q Consensus       542 G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  621 (817)
                           +                        .                      +.++++|+|..|...+..++....++.
T Consensus       187 -----~------------------------~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (355)
T TIGR00896       187 -----R------------------------L----------------------TPVRIWRSPLAWQVTVFFGLQSGLYYS  215 (355)
T ss_pred             -----C------------------------C----------------------CCchhhcCHhHHHHHHHHHHHHHHHHH
Confidence                 0                        0                      124567788888877777777888888


Q ss_pred             HHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q psy11734        622 ISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGC  701 (817)
Q Consensus       622 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~  701 (817)
                      ...|+|.|+++ .|.|..+.+...+...++.++++++.|++.||+++|+.         ....+..+..++.+.+.+...
T Consensus       216 ~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~---------~~~~~~~~~~~~~~~~~~~~~  285 (355)
T TIGR00896       216 LIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRG---------IVAVLAVLQLVGLCGLLFAPM  285 (355)
T ss_pred             HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchH---------HHHHHHHHHHHHHHHHHHhhh
Confidence            99999999987 69999999999999999999999999999999964432         223455555555554544332


Q ss_pred             chHHHHHHHHHHHHHHhhhhhhhhhhccc-cCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCcc
Q psy11734        702 NTSMVAICFTIGMAFMGFCYASIRVNPID-LSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTL  767 (817)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~  767 (817)
                      +. ... ...+.+++.+..++.......+ ..+ +++++..++.+..+++++.++|.+.|.+.|+.+.
T Consensus       286 ~~-~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~  351 (355)
T TIGR00896       286 HG-LWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN  351 (355)
T ss_pred             hH-HHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            22 111 2334455555555555444433 333 6689999999999999999999999999998853

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.83  E-value=5.2e-20  Score=205.97  Aligned_cols=261  Identities=15%  Similarity=0.028  Sum_probs=196.7

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...+...+.+.|++|+++|.++.++......+|..++|.+++.+.+ ..|||++|++.+++.++..+..+
T Consensus       107 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-~~~w~~~~~~~~~~~~~~~~~~~  185 (406)
T PRK15402        107 LRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH-VLPWRGMFVLFAALAALSFFGLW  185 (406)
T ss_pred             HHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCccHHHHHHHHHHHHHHHHHH
Confidence            38899999998889999999999999999999999999999999999999999999 89999999998888777766665


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +..||++++++   +++.                   ++                                         
T Consensus       186 ~~~~~~~~~~~---~~~~-------------------~~-----------------------------------------  202 (406)
T PRK15402        186 RAMPETAGRVG---EKLS-------------------LK-----------------------------------------  202 (406)
T ss_pred             HhCCCCCcccc---cccc-------------------HH-----------------------------------------
Confidence            55555432110   0000                   00                                         


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                    +...++++++|||.++...+..++.....+....+.|.|+++.+|+++.+
T Consensus       203 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~  252 (406)
T PRK15402        203 ------------------------------ELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYE  252 (406)
T ss_pred             ------------------------------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHH
Confidence                                          00223567899999998888877777777777788899998889999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc----CCChhHHHHHHHHHHHH
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV----GCNTSMVAIFFTIGMAF  316 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~  316 (817)
                      .+....+..++..++.++.|+++||.++|+.          ...+.....++...+...    ..+..+......+.+.+
T Consensus       253 ~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g  322 (406)
T PRK15402        253 YGLLQVPVFGALIAGNLTLARLTSRRPLRSL----------IRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFG  322 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH----------HHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence            9988888888999999999999999998875          555555554444443322    22333344444444445


Q ss_pred             hhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        317 MGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       317 ~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      .+...+..........|+++|++.++.+..+.++..+|+.+.+.+.+..
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~  371 (406)
T PRK15402        323 IGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG  371 (406)
T ss_pred             HHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence            5444444444444556689999999999999999999999999887765

>KOG1330|consensus

Probab=99.83  E-value=2.6e-20  Score=196.63  Aligned_cols=284  Identities=14%  Similarity=0.151  Sum_probs=212.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734        445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG  524 (817)
Q Consensus       445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g  524 (817)
                      ..+..+..+.++++...++++||+.+....+++..                                   .+|+++++.|
T Consensus        27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~-----------------------------------~fni~~s~~G   71 (493)
T KOG1330|consen   27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQT-----------------------------------YFNISDSELG   71 (493)
T ss_pred             ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHH-----------------------------------hcCCCchhcc
Confidence            45566788999999999999999999887776666                                   9999999999


Q ss_pred             HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-------------
Q psy11734        525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-------------  591 (817)
Q Consensus       525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-------------  591 (817)
                      ++.+.|.+.+.+.+|++|+++|||+||+++.+|..+|++++++++++.  .||+++++|.+.|+|++             
T Consensus        72 ll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~--~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~  149 (493)
T KOG1330|consen   72 LLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN--HFWQVLLCRGFVGIGEASYSPIAPSLIADS  149 (493)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH--HHHHHHHHHHHhccchhhhcccchhHhhhc
Confidence            999999999999999999999999999999999999999999999998  99999999999999999             


Q ss_pred             --------------------------------------------------------------------------c-----
Q psy11734        592 --------------------------------------------------------------------------L-----  592 (817)
Q Consensus       592 --------------------------------------------------------------------------~-----  592 (817)
                                                                                                .     
T Consensus       150 f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~  229 (493)
T KOG1330|consen  150 FPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKP  229 (493)
T ss_pred             CcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCC
Confidence                                                                                      0     


Q ss_pred             ----CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHH---HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy11734        593 ----ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQ---VIGLSVAENGVLSALPFLIMWLVSMSSSALADY  665 (817)
Q Consensus       593 ----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~---~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr  665 (817)
                          .++.+...|+|.+....+.+....+..-++..|.|.++..   ..|.+..+..++..+...++.+|..++|.++||
T Consensus       230 ~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~  309 (493)
T KOG1330|consen  230 FTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDK  309 (493)
T ss_pred             ccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHH
Confidence                0112334556777777888888888888888888888764   346677778888889999999999999999999


Q ss_pred             hhccccc-ccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHH-HHHHHHHHHhhhhhhhhhhccccC-CCchHHHHHH
Q psy11734        666 LIVRDIL-SRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAI-CFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMAL  742 (817)
Q Consensus       666 ~g~~~~~-~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~  742 (817)
                      +-++..- ....+-......+...++..+.+............. ++.++........+...-+..++. |+.|.++.++
T Consensus       310 ~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~  389 (493)
T KOG1330|consen  310 LSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYAL  389 (493)
T ss_pred             HHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHH
Confidence            7653211 001122334444444444444444443322233333 333333332233333333344444 5899999999


Q ss_pred             HHHHHHH-HHhHHHHHHHHhhcCC
Q psy11734        743 SNGLGCV-SGMVAPLTVGFLTQNK  765 (817)
Q Consensus       743 ~~~~~~~-g~~i~p~~~g~~~~~~  765 (817)
                      ...+..+ |.+-+|++.|.+.|+.
T Consensus       390 ~~~~~h~fgd~~~p~ivGilsd~l  413 (493)
T KOG1330|consen  390 DTVFEHIFGDAASPYIVGILSDKL  413 (493)
T ss_pred             HHHHHHHhccCCCcceehhHHHHh
Confidence            9888776 6677777999999976

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.83  E-value=3.1e-20  Score=205.05  Aligned_cols=260  Identities=14%  Similarity=0.101  Sum_probs=193.1

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|.++|++.+..++.....+.+++| |||+++.++...+.++|..+++++.+.+.+ ..|||+.|++.+++.++..+..+
T Consensus        97 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~  174 (377)
T TIGR00890        97 TYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN-LEGVPAAFIYMGIIFLLVIVLGA  174 (377)
T ss_pred             HHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHH
Confidence            3788999999989999999999996 689999999999999999988888888888 88999999999988888877777


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +++|++|++++..++ +         .    +                                                
T Consensus       175 ~~~~~~~~~~~~~~~-~---------~----~------------------------------------------------  192 (377)
T TIGR00890       175 FLIGYPPGQLIKTNI-E---------V----S------------------------------------------------  192 (377)
T ss_pred             HheecCchhccccCc-c---------c----c------------------------------------------------
Confidence            776654322110000 0         0    0                                                


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                    +++.+.++++|||+++...+..++..........+.+.|.++ +|.+..+
T Consensus       193 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  241 (377)
T TIGR00890       193 ------------------------------VKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGF  241 (377)
T ss_pred             ------------------------------hhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHH
Confidence                                          001135678889998888777777766666666777777765 6888888


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCCh-hHHHHHHHHHHHHhhh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNT-SMVAIFFTIGMAFMGF  319 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~g~  319 (817)
                      .+.+.....++..+++++.|+++||++||+.          ...+..+..++...+...++.. ........+.+...+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~  311 (377)
T TIGR00890       242 LVLAVSISSIFNGGGRPFLGALSDKIGRQKT----------MSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGG  311 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh----------hhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999885          5566666666655554443222 1222223333344444


Q ss_pred             ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ..+.......|..| ++|+++.|+.+....+|++++|.+.|.+.|+.
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~  358 (377)
T TIGR00890       312 TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI  358 (377)
T ss_pred             chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            44444555666555 78999999999999999999999999888764

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.82  E-value=4.5e-20  Score=203.92  Aligned_cols=283  Identities=17%  Similarity=0.130  Sum_probs=196.3

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHh-hhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLAT-FCSGLIMSFTASWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~-~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~   79 (817)
                      .|+++|++.+...|...+++.|++|+|||+++.++......+|..+++ .+++.+.+ ..+||+.|++.+.+.++..++.
T Consensus        89 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  167 (379)
T TIGR00881        89 LWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE-LYSWHWVFIVPGIIAIIVSLIC  167 (379)
T ss_pred             HHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-cCCchhHHHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999999999999999 47777777 8899999999988888877777


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      +++.||+|++++..+.++...  ++.+..+..+++  +                                          
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~------------------------------------------  201 (379)
T TIGR00881       168 FLLLRDSPQSCGLPPAEEMPN--EEPDGDAEKKEE--E------------------------------------------  201 (379)
T ss_pred             heeeCCCccccccCccccCcc--cccccccccccc--c------------------------------------------
Confidence            777777665432211111000  000000000000  0                                          


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                                                   .++.+...++++|+|.++...+..++.....+.+..+.|.|+++.+|+++.
T Consensus       202 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  252 (379)
T TIGR00881       202 -----------------------------LTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKE  252 (379)
T ss_pred             -----------------------------ccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence                                         001122356788999999999999988888899999999999998899999


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC-CChhHHHHHHHHHHHHhh
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAIFFTIGMAFMG  318 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g  318 (817)
                      +++....+..+++.+++++.|++.||..+|+.       .............++....... .+.........+.+....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (379)
T TIGR00881       253 KASWAFTLYELGGLVGTLLAGWLSDKLFNGRR-------GPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVY  325 (379)
T ss_pred             HHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc-------hHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999754442       1111112222222222222211 122222222222222222


Q ss_pred             hccccccccccccC-CCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        319 FCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       319 ~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      ...+.......|.. +++|+++.|+.+....+|+.++|.+.|.+.|+.|
T Consensus       326 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g  374 (379)
T TIGR00881       326 GPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG  374 (379)
T ss_pred             hhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence            22222344455544 5899999999999999999999999999999764

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.82  E-value=1.5e-17  Score=188.98  Aligned_cols=434  Identities=12%  Similarity=0.068  Sum_probs=263.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccchhhHHHH
Q psy11734        203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADF-FIARDILSRTNVRKVF  281 (817)
Q Consensus       203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~~~~~~~  281 (817)
                      +.++.++...++...++|++..+++.|+++.+|.+..+++++.........+..+++|+++|| +|||+.          
T Consensus        14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~----------   83 (489)
T PRK10207         14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRT----------   83 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHH----------
Confidence            457788888889999999999999999999999999999988888888888888999999999 999996          


Q ss_pred             HHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-C--chhHHHHHHHhhhhhccccccccc
Q psy11734        282 ATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-N--FSGTIMALSNGLGCVSGMVAPLTV  358 (817)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~--~~g~a~g~~~~~~~lg~~~~~~i~  358 (817)
                      ...+.++..++.+.+....+..........+.+.+.+...+.......|..| +  +|+.++++.+...++|.++||.+.
T Consensus        84 ~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~  163 (489)
T PRK10207         84 IVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA  163 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence            7788877777776666554323333344555556666677777777777665 4  457899999999999999999999


Q ss_pred             ceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        359 GFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       359 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                      |.+.++.                                             +|++.|++.++..+++.+.+.+.++.-+
T Consensus       164 g~l~~~~---------------------------------------------gw~~~F~i~~i~~~~~~~~~~~~~~~~~  198 (489)
T PRK10207        164 PVIADKF---------------------------------------------GYSVTYNLCGAGLIIALLVYFACRGMVK  198 (489)
T ss_pred             HHHHHhh---------------------------------------------ChHHHHHHHHHHHHHHHHHHHHcchhhc
Confidence            9987764                                             6999999976655555555544432211


Q ss_pred             ccccCC-CCchhH--HHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccc
Q psy11734        439 QYWNES-ILPARY--VLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAK  515 (817)
Q Consensus       439 ~~~~~~-~~~~~~--~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (817)
                      +..++. ..+.++  .++....+......                                                   
T Consensus       199 ~~~~~~~~~~~d~~~~~l~~~~~~~~~~~---------------------------------------------------  227 (489)
T PRK10207        199 DIGSEPDHKPMSFSKLLLVLLGSVVMIFV---------------------------------------------------  227 (489)
T ss_pred             ccCCCCCccchhhhhHHHHHHHHHHHHHH---------------------------------------------------
Confidence            111011 001110  00100000000000                                                   


Q ss_pred             ccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCch
Q psy11734        516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETP  595 (817)
Q Consensus       516 ~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~  595 (817)
                                               .....|+ + +..... +...++... ..+..                   ...+
T Consensus       228 -------------------------~~~~~~~-~-~~~~~~-~~~~~~i~~-~~f~~-------------------~~~~  259 (489)
T PRK10207        228 -------------------------CAWLMHN-V-EVANLV-LIVLSIVVT-IIFFR-------------------EAFK  259 (489)
T ss_pred             -------------------------HHHHHhh-h-hHHHHH-HHHHHHHHH-HHHHH-------------------HHhc
Confidence                                     0001111 0 000000 000000000 00100                   0001


Q ss_pred             hHHhhcCHhHHHHHH--HHHHHHHHHHHHHhhHHHHHHHHhCCCh----hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy11734        596 WAAILSSLPVWSLII--SEVGHDYGFYLISSDLPKYMSQVIGLSV----AENGVLSALPFLIMWLVSMSSSALADYLIVR  669 (817)
Q Consensus       596 ~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~l~~~~g~s~----~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~  669 (817)
                      ..+..|+|.+....+  ...+....+....+.+|.|.++..+.+.    .....+..+..+..++..++.+++.||+++|
T Consensus       260 ~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r  339 (489)
T PRK10207        260 LDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSK  339 (489)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhC
Confidence            124556665443332  2344444455555778888875333221    1234444556677778888899999999988


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHH-----Hhh----cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHH
Q psy11734        670 DILSRTNVRKVFATLGAVLPGVGALAA-----SYV----GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTI  739 (817)
Q Consensus       670 ~~~~~~~~r~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~  739 (817)
                      +.-. ....|  ...++++.+++++.+     ...    ..+.++.+...++.+.+..+..++....+.+..| +.+|.+
T Consensus       340 ~~~~-~~~~k--~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~  416 (489)
T PRK10207        340 GKDL-SMPMK--FTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFI  416 (489)
T ss_pred             CCCC-CcHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHH
Confidence            5200 01111  134555555454322     111    1234666667777777777777777777777777 789999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhhcCC-------ccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        740 MALSNGLGCVSGMVAPLTVGFLTQNK-------TLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       740 ~g~~~~~~~~g~~i~p~~~g~~~~~~-------g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                      +|+.+...++|+.++..+........       .+..+...|...+...+++.++++...+
T Consensus       417 ~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~  477 (489)
T PRK10207        417 LGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP  477 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999988876553210       1123667788888777777666665543

>PRK03699 putative transporter; Provisional

Probab=99.82  E-value=3.9e-18  Score=189.90  Aligned_cols=346  Identities=11%  Similarity=0.060  Sum_probs=224.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHH
Q psy11734        203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFA  282 (817)
Q Consensus       203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~  282 (817)
                      +-++..+...++.......+...+|.+.++ +|.|..+.++......++..++++++|++.||+|||+.          +
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~----------~   75 (394)
T PRK03699          7 KLTWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQ----------L   75 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH----------H
Confidence            345666777777777777777888887665 89999999999999999999999999999999999985          6


Q ss_pred             HHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccccccee
Q psy11734        283 TLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL  361 (817)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l  361 (817)
                      ..+..+..++.....+.+ +.....+...+.+.+.+...+.......+..| ++|+.+.+..+....+|+.++|.+.+.+
T Consensus        76 ~~~~~~~~i~~~l~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l  154 (394)
T PRK03699         76 IFGFALMILAVAGLMFSH-SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL  154 (394)
T ss_pred             HHHHHHHHHHHHHHHHcc-hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666666666666665543 44444445555555555555555566666666 6899999999888888888888887766


Q ss_pred             cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc-
Q psy11734        362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY-  440 (817)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~-  440 (817)
                      .+..                                            .+|++.|.+.+++.++..++..+...++.++ 
T Consensus       155 ~~~~--------------------------------------------~gw~~~f~~~~~~~~~~~~~~~~~~~p~~~~~  190 (394)
T PRK03699        155 LARS--------------------------------------------IEWYWVYACIGLVYVAIFILTLFSEFPALGKH  190 (394)
T ss_pred             Hhcc--------------------------------------------ccHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            5432                                            1699999988877766555444322111111 


Q ss_pred             -c--cC--CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccc
Q psy11734        441 -W--NE--SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAK  515 (817)
Q Consensus       441 -~--~~--~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (817)
                       .  ++  .+.+.+. .+..+++..+........+....|...+                                  ++
T Consensus       191 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~l~----------------------------------~~  235 (394)
T PRK03699        191 APKADKPVAKEKWGI-GVLFLAIAALLYILAQLTFISWVPEYAQ----------------------------------KK  235 (394)
T ss_pred             CccccCccccccCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------HH
Confidence             0  00  0111111 1222223333322333333333444332                                  27


Q ss_pred             ccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCch
Q psy11734        516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETP  595 (817)
Q Consensus       516 ~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~  595 (817)
                      +|+|+.+.+++.+.+.++..++.+..|+++||++||+++.....+..+...+....+  +.+.+.+.-++.|++      
T Consensus       236 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~G~~------  307 (394)
T PRK03699        236 FGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD--DPSHLLYAILGLGFF------  307 (394)
T ss_pred             cCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHHHHH------
Confidence            899999999999999999999999999999999999998887776666555554444  333222222222211      


Q ss_pred             hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy11734        596 WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI-GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRD  670 (817)
Q Consensus       596 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~  670 (817)
                                          ....+..   ...+..+.. +-+....+.......+++.++..+.|++.|+.|-+.
T Consensus       308 --------------------~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~  360 (394)
T PRK03699        308 --------------------SSAIYTT---IITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQA  360 (394)
T ss_pred             --------------------HHHHHHH---HHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchh
Confidence                                1111111   111122211 123344566777777899999999999999988654

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.82  E-value=1.5e-18  Score=196.19  Aligned_cols=358  Identities=13%  Similarity=0.108  Sum_probs=238.0

Q ss_pred             HHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHH
Q psy11734        214 GHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGA  293 (817)
Q Consensus       214 ~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~  293 (817)
                      ........+..|++.|+++.+|.|+.++|.+.+...+...+..++.|+++||.++|.     +.||.++..+....+++.
T Consensus        10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~-----Grrr~~i~~~~~~~~i~~   84 (437)
T TIGR00792        10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRW-----GKFRPWLLIGAIPFSIVL   84 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCC-----CCcchhHHHhHHHHHHHH
Confidence            344555666778999999999999999999999999999999999999999854332     112334666766666666


Q ss_pred             HhhhccCCC-----hhHHHHHHHHHHHHhhhccccccccccccC--CCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        294 LAASYVGCN-----TSMVAIFFTIGMAFMGFCYASIRVNPIDLS--PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       294 ~~~~~~~~~-----~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      +.+...++.     ..+......+...+.........+...+..  +++|++..+..+....+|+.+++.+.+.+....+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~  164 (437)
T TIGR00792        85 VLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFG  164 (437)
T ss_pred             HHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            655544321     112222222233333333334445555543  4789999999999999888887777666554322


Q ss_pred             ccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCC
Q psy11734        367 SINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESIL  446 (817)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (817)
                      .                                      +....+|+..+.+.+++.++..++..+..||++++.+++  
T Consensus       165 ~--------------------------------------~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~--  204 (437)
T TIGR00792       165 G--------------------------------------GDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN--  204 (437)
T ss_pred             C--------------------------------------CcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc--
Confidence            0                                      001237999999888887776665544443322100000  


Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734        447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI  526 (817)
Q Consensus       447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~  526 (817)
                                                     .+                                  ++.  +.      
T Consensus       205 -------------------------------~~----------------------------------~~~--~~------  211 (437)
T TIGR00792       205 -------------------------------IE----------------------------------KKL--SL------  211 (437)
T ss_pred             -------------------------------cc----------------------------------cCC--CH------
Confidence                                           00                                  000  00      


Q ss_pred             HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHH
Q psy11734        527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVW  606 (817)
Q Consensus       527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~  606 (817)
                                                                                        .+.+++++++|+++
T Consensus       212 ------------------------------------------------------------------~~~~~~l~~~~~~~  225 (437)
T TIGR00792       212 ------------------------------------------------------------------KQIFKALFKNDQLL  225 (437)
T ss_pred             ------------------------------------------------------------------HHHHHHHhCCHHHH
Confidence                                                                              01246678899998


Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHH
Q psy11734        607 SLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGA  686 (817)
Q Consensus       607 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~  686 (817)
                      ......++.....+....+.+.|.++..+ +..+.+.+.....++.+++.++.++++||+|+|+.+          ..+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~----------~~~~  294 (437)
T TIGR00792       226 ILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF----------AGGI  294 (437)
T ss_pred             HHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHH
Confidence            88888888888877777777777766656 556677777778899999999999999999987653          3555


Q ss_pred             HHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccC--------CCchHHHHHHHHHHHHHHHhHHHHHH
Q psy11734        687 VLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLS--------PNFSGTIMALSNGLGCVSGMVAPLTV  758 (817)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~g~~~g~~~~~~~~g~~i~p~~~  758 (817)
                      .+..++.+.+.+...+.+.......+.+++.+...+..++...|..        ++.+|++.|+.+....+++.+++.+.
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~  374 (437)
T TIGR00792       295 LLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV  374 (437)
T ss_pred             HHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555555555443323344444555555666666666666666543        35689999999999999999999999


Q ss_pred             HHhhcCCc
Q psy11734        759 GFLTQNKT  766 (817)
Q Consensus       759 g~~~~~~g  766 (817)
                      |.+.|..|
T Consensus       375 g~ll~~~G  382 (437)
T TIGR00792       375 GLILGIIG  382 (437)
T ss_pred             HHHHHHcC
Confidence            99988654

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.82  E-value=9.6e-20  Score=202.47  Aligned_cols=254  Identities=13%  Similarity=0.067  Sum_probs=186.7

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.|...|...+++.|++|+|||+++.++...+.++|..++|++++.+.+ ..|||++|++.+++.+++.+...
T Consensus       114 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-~~gw~~~f~~~~~l~~~~~l~~~  192 (394)
T PRK10213        114 GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-LIGWRNVFNAAAVMGVLCIFWII  192 (394)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999999 89999999998877766554444


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      ...||+|+++      +.                                                              
T Consensus       193 ~~~p~~~~~~------~~--------------------------------------------------------------  204 (394)
T PRK10213        193 KSLPSLPGEP------SH--------------------------------------------------------------  204 (394)
T ss_pred             HHCCCCCccc------cc--------------------------------------------------------------
Confidence            4344322100      00                                                              


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                     ...+.++++|+|.++...+..++.....++...+.+.++.+.+|+++.+
T Consensus       205 -------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~  253 (394)
T PRK10213        205 -------------------------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDG  253 (394)
T ss_pred             -------------------------------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH
Confidence                                           0112456789999988877777777777777777755455557999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      .+......+++..+++++.+++.||.+++..          ...........+..... .++.+.......+.+.+.+..
T Consensus       254 ~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l----------~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~l~G~~~~~~  322 (394)
T PRK10213        254 LTLVLLSFGIASFVGTSLSSFILKRSVKLAL----------AGAPLVLAVSALVLTLW-GSDKIVATGVAIIWGLTFALV  322 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccchhHH----------HHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999543321          22222222222222222 224444444444455555555


Q ss_pred             cccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        321 YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       321 ~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      .+......++..|++++.+.+......++|..+||.+.|.+.|..
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~  367 (394)
T PRK10213        323 PVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNI  367 (394)
T ss_pred             hHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            665565666656777788888888889999999999999998875

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.82  E-value=9.3e-19  Score=201.13  Aligned_cols=306  Identities=16%  Similarity=0.138  Sum_probs=209.9

Q ss_pred             CCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734        443 ESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT  522 (817)
Q Consensus       443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  522 (817)
                      .+..++++.+..++.++.+...+|...++...|.+.++                              ...++.+.++.+
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~   57 (502)
T TIGR00887         8 APFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYV------------------------------YYHGKGPLPSSV   57 (502)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------hccCcccchHHH
Confidence            34567888889999999999999999999988776540                              000123456778


Q ss_pred             HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcc------hHHHHHHHHHHhhhcc-----
Q psy11734        523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSG------PVSMTVLRFLEGVGED-----  591 (817)
Q Consensus       523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s------~~~l~~~R~l~Gig~~-----  591 (817)
                      .+++.+.+.+++.+++++.|+++||+|||+++.++++++.++++++++++  +      ++.++++|+++|++.+     
T Consensus        58 ~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~r~l~G~~~g~~~~~  135 (502)
T TIGR00887        58 SAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSP--GSSPKSVMATLCFWRFWLGVGIGGDYPL  135 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcc--CcccchHHHHHHHHHHHHHHHHhhhhHH
Confidence            89999999999999999999999999999999999999999999999987  5      7889999999999999     


Q ss_pred             -------------------------------------------cC--------------------chhH-----------
Q psy11734        592 -------------------------------------------LE--------------------TPWA-----------  597 (817)
Q Consensus       592 -------------------------------------------~~--------------------~~~~-----------  597 (817)
                                                                 ..                    ..|+           
T Consensus       136 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~  215 (502)
T TIGR00887       136 SAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPAL  215 (502)
T ss_pred             HHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHH
Confidence                                                       00                    0111           


Q ss_pred             ------------------------------------------------------------HhhcC---HhH----HHHHH
Q psy11734        598 ------------------------------------------------------------AILSS---LPV----WSLII  610 (817)
Q Consensus       598 ------------------------------------------------------------~~l~~---~~~----~~~~~  610 (817)
                                                                                  +++++   ++.    +....
T Consensus       216 i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  295 (502)
T TIGR00887       216 LALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAG  295 (502)
T ss_pred             HHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHH
Confidence                                                                        01110   011    11112


Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHH------------HHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734        611 SEVGHDYGFYLISSDLPKYMSQVIGLSVAENGV------------LSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR  678 (817)
Q Consensus       611 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r  678 (817)
                      ..++....+|+...|.|+++++ .|++..+.+.            ......++.+++.++.++++||+|||+.+      
T Consensus       296 ~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l------  368 (502)
T TIGR00887       296 SWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ------  368 (502)
T ss_pred             HHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH------
Confidence            2334445667777889999976 6876542211            23344456777899999999999998653      


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcC--chHHHHHHHHHHHHH-HhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHH
Q psy11734        679 KVFATLGAVLPGVGALAASYVGC--NTSMVAICFTIGMAF-MGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVA  754 (817)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~  754 (817)
                          +.+..+.++++.++.....  +.........+..++ .....+..+....|.+| +.|+++.|+.+.++.++++++
T Consensus       369 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~  444 (502)
T TIGR00887       369 ----LMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIG  444 (502)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHH
Confidence                3455554544444433210  111111222222222 22234556677889999 779999999999999999999


Q ss_pred             HHHHHHhhcCCc-------cccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        755 PLTVGFLTQNKT-------LLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       755 p~~~g~~~~~~g-------~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      |.+.+.+.|..+       ..++...|++.+++.+++.+..++.
T Consensus       445 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~l  488 (502)
T TIGR00887       445 QFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLI  488 (502)
T ss_pred             HHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEe
Confidence            999999988532       1124567777777777776654433

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.82  E-value=1.9e-19  Score=199.84  Aligned_cols=254  Identities=17%  Similarity=0.181  Sum_probs=191.4

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...+...+++.|++|+|+|+++.++.+....+|..+++.+++.+.+ ..|||++|++.+.+.++..+..+
T Consensus        99 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~  177 (385)
T TIGR00710        99 LRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV-WLSWHAIFAFLSLAGILLSALIF  177 (385)
T ss_pred             HHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999999999999 89999999998887777766666


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +..||+++.+++.+.++                                                               
T Consensus       178 ~~~~~~~~~~~~~~~~~---------------------------------------------------------------  194 (385)
T TIGR00710       178 FILPETLPYEARIQIST---------------------------------------------------------------  194 (385)
T ss_pred             HhCCCCCCCcccCCHHH---------------------------------------------------------------
Confidence            66555432211100000                                                               


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                     ...+.++++|||+++...+...+.....+....+.|.++++.+|+++.+
T Consensus       195 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  243 (385)
T TIGR00710       195 -------------------------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSV  243 (385)
T ss_pred             -------------------------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHH
Confidence                                           0123567788999988888877778888888899999999889999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc---C-CChhHHHHHHHHHHHH
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV---G-CNTSMVAIFFTIGMAF  316 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~l~~~~  316 (817)
                      .+.+..+..++..+++++.|++.||+++|+.          ...+..+..++...+...   . +..........+.+.+
T Consensus       244 ~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  313 (385)
T TIGR00710       244 FGLLFALNIIAMIFGGFLNGRFIKKWGAKSL----------LRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIG  313 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH----------HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998875          444444444433333222   1 1222223333334444


Q ss_pred             hhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccc
Q psy11734        317 MGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVG  359 (817)
Q Consensus       317 ~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g  359 (817)
                      .+...+.......|..|++++++.++.+..++.++.+.+.+.+
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~  356 (385)
T TIGR00710       314 NSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS  356 (385)
T ss_pred             HHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555555556666777889999999999999876666666655

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.81  E-value=9.9e-18  Score=186.85  Aligned_cols=390  Identities=13%  Similarity=0.151  Sum_probs=252.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHH
Q psy11734        205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATL  284 (817)
Q Consensus       205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~  284 (817)
                      ++..+..++..+..........|.+ ++.+|.|..++|++.++..++..++++..|++.||+|+|+.          +..
T Consensus         5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~----------~~~   73 (410)
T TIGR00885         5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAG----------ILL   73 (410)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH----------HHH
Confidence            4555556665555554445666655 66689999999999999999999999999999999999986          777


Q ss_pred             HhHHHHHHHHhhhcc--CCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccccccee
Q psy11734        285 GAVLPGVGALAASYV--GCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL  361 (817)
Q Consensus       285 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l  361 (817)
                      +..+..++...+...  .++.+.......+.+.+.+...+..+....+..| +++++..++.+....+|+.++|.+.+.+
T Consensus        74 g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l  153 (410)
T TIGR00885        74 GLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL  153 (410)
T ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            887777776665332  2245555555566666666666666666666555 7899999999999999999999998877


Q ss_pred             cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccc
Q psy11734        362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYW  441 (817)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~  441 (817)
                      ...............                  ..+.... ...+....+|+..|++.+++.++..++..+. + .++. 
T Consensus       154 ~~~~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~-~p~~-  211 (410)
T TIGR00885       154 ILSNLPHQSQDVLDK------------------LSPEELS-AIKHSDLASVQTPYMIIGAVVLAVALLIMLT-K-MPAL-  211 (410)
T ss_pred             HhcCCccchhhhhhh------------------cCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-CCCC-
Confidence            643210000000000                  0000000 0001123479999998888766554433221 1 1110 


Q ss_pred             cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734        442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER  521 (817)
Q Consensus       442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  521 (817)
                      +++                                  +                          ++       +-+    
T Consensus       212 ~~~----------------------------------~--------------------------~~-------~~~----  220 (410)
T TIGR00885       212 NHS----------------------------------D--------------------------AK-------QIS----  220 (410)
T ss_pred             Ccc----------------------------------c--------------------------cc-------ccc----
Confidence            000                                  0                          00       000    


Q ss_pred             hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734        522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS  601 (817)
Q Consensus       522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~  601 (817)
                                                                                            ..++.++++|
T Consensus       221 ----------------------------------------------------------------------~~~~~~~~~~  230 (410)
T TIGR00885       221 ----------------------------------------------------------------------FSASLSRLAR  230 (410)
T ss_pred             ----------------------------------------------------------------------chhhHHHHHh
Confidence                                                                                  0012346778


Q ss_pred             CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHH
Q psy11734        602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI-GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV  680 (817)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~  680 (817)
                      +|+++...+..+++.....+..++++.|+++.. +.+...++.+.+.......+|+++++++.||+++|+.+        
T Consensus       231 ~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l--------  302 (410)
T TIGR00885       231 IRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL--------  302 (410)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--------
Confidence            888888888888888888888999999997632 44555556666677788899999999999999887543        


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHH-HHHHHHHHHHHHHhHHHHHHH
Q psy11734        681 FATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGT-IMALSNGLGCVSGMVAPLTVG  759 (817)
Q Consensus       681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~~g~~i~p~~~g  759 (817)
                        .+...+..+++++....+ +. .....+.+.+++.+..+|..++...+..+++..+ +.++...  .+|+++.|.+.|
T Consensus       303 --~i~~~~~~~~~ll~~~~~-~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G  376 (410)
T TIGR00885       303 --MAYAIIGMALCLGSIFAG-GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQG  376 (410)
T ss_pred             --HHHHHHHHHHHHHHHHcC-Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHH
Confidence              345555555555555543 32 3355555666777777788888888777755444 4444443  399999999999


Q ss_pred             HhhcCCc---cccHHHHHHHHHHHHH
Q psy11734        760 FLTQNKT---LLEWRVVFWIMFLTLF  782 (817)
Q Consensus       760 ~~~~~~g---~~~~~~~~~~~~~~~~  782 (817)
                      .+.|..+   .++++..|++...+.+
T Consensus       377 ~~~d~~~~~~~~~~~~~~~~~~~~~~  402 (410)
T TIGR00885       377 FIIDMKEIAAAPAVNTSFILPLLCFA  402 (410)
T ss_pred             HHHHHhcccccCccchHHHHHHHHHH
Confidence            9999641   1135666665444433

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.81  E-value=1.5e-19  Score=207.68  Aligned_cols=285  Identities=14%  Similarity=0.132  Sum_probs=177.0

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc----------------------cc
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS----------------------FT   58 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~----------------------~~   58 (817)
                      +|+++|++.|..+|....++.|++|+|+|++++++.+....+|..+++.++.++..                      ..
T Consensus       121 ~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (502)
T TIGR00887       121 WRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVD  200 (502)
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhc
Confidence            48999999999999999999999999999999999999999999999998876532                      01


Q ss_pred             cCcchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHH-----hHhhhhccccccccccccccCccccchhhhhhhhc
Q psy11734         59 ASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKER-----KYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYG  133 (817)
Q Consensus        59 ~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (817)
                      .+||++|.+.+++.++..+. .+++||+|+   +...+++     .+...+....+. ++++.+.++             
T Consensus       201 ~~WR~~~~~~~ip~~i~~~~-~~~lpESpr---~l~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-------------  262 (502)
T TIGR00887       201 YMWRILIGFGAVPALLALYF-RLTIPETPR---YTADVAKDVEQAASDMSAVLQVKI-EAEPDEVEK-------------  262 (502)
T ss_pred             ccHHHHHHHHHHHHHHHHHH-HHhCCCCHH---HHHHhCcchHHHHHHHHHHhcccc-ccCcccccc-------------
Confidence            47999998877766655444 445566554   3211111     111111100000 000000000             


Q ss_pred             hhhccccccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhch---h----HH
Q psy11734        134 YTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSL---P----VW  206 (817)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~----~~  206 (817)
                                                                         .+..+++.+.+++++++++   +    .+
T Consensus       263 ---------------------------------------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  291 (502)
T TIGR00887       263 ---------------------------------------------------ASTAVEVPKASWSDFFTHFFKWRHGKHLL  291 (502)
T ss_pred             ---------------------------------------------------hhccccchhhhHHHHHHHHhhhHHHHHHH
Confidence                                                               0000011123566776531   2    22


Q ss_pred             HHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccch------------hhhhhHHHHHHHHhhhHHHHHHHhhcCcccc
Q psy11734        207 SLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGV------------LSALPFLIMWLVSMSSSALADFFIARDILSR  274 (817)
Q Consensus       207 ~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~------------~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~  274 (817)
                      ......++....+|+...|.|.++++ .|++..+++.            ......++.+++.+++++++||+|||+.   
T Consensus       292 ~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~---  367 (502)
T TIGR00887       292 GTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPI---  367 (502)
T ss_pred             HHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhH---
Confidence            23334455566788888999999976 6887654332            1233445677788999999999999985   


Q ss_pred             hhhHHHHHHHHhHHHHHHHHhhhccCC--ChhHHHHHHHHHHHH-hhhccccccccccccCC-CchhHHHHHHHhhhhhc
Q psy11734        275 TNVRKVFATLGAVLPGVGALAASYVGC--NTSMVAIFFTIGMAF-MGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVS  350 (817)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg  350 (817)
                             ...+..+..+++..+....+  +............+. .....+....+..|..| +.|+++.|+.+.+.+++
T Consensus       368 -------l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~  440 (502)
T TIGR00887       368 -------QLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAG  440 (502)
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhH
Confidence                   45555555544443332211  111111222222222 22233445666788887 78999999999999999


Q ss_pred             ccccccccceecccc
Q psy11734        351 GMVAPLTVGFLTQNI  365 (817)
Q Consensus       351 ~~~~~~i~g~l~~~~  365 (817)
                      ++++|.+.+.+.|..
T Consensus       441 ~~~~~~~~~~l~~~~  455 (502)
T TIGR00887       441 AIIGQFGFLYLAQHG  455 (502)
T ss_pred             HHHHHHHhhhhhccc
Confidence            999999999988754

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.81  E-value=8.8e-19  Score=194.67  Aligned_cols=274  Identities=18%  Similarity=0.192  Sum_probs=197.2

Q ss_pred             HHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccc--cCChhhHHHHHH--HHHH---H
Q psy11734        461 TLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKF--DWDERTQGVILS--AFYY---G  533 (817)
Q Consensus       461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~g~~~s--~~~~---~  533 (817)
                      +.+++|++.++...+.+.+                                   ++  +.++++.+.+.+  .+..   +
T Consensus         3 ~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~   47 (394)
T TIGR00883         3 AVEWFDFYLYGFAAVLVFH-----------------------------------TFFPPSGDPLVALLATFATFAAGFLA   47 (394)
T ss_pred             chhHHHHHHHHHHHHHHHH-----------------------------------HhcCCCCChHHHHHHHHHHHHHHHHH
Confidence            5678899999988877776                                   33  244555555444  3333   3


Q ss_pred             HHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchH--------HHHHHHHHHhhhcc--------------
Q psy11734        534 YILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPV--------SMTVLRFLEGVGED--------------  591 (817)
Q Consensus       534 ~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~--------~l~~~R~l~Gig~~--------------  591 (817)
                      ..+++++.|+++||+|||+++..+.++.+++.+++++++  +++        .+++.|+++|++.+              
T Consensus        48 ~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~  125 (394)
T TIGR00883        48 RPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLP--SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA  125 (394)
T ss_pred             hhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCC--ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC
Confidence            347899999999999999999999999999999999998  765        48999999999877              


Q ss_pred             -----------------------------------------------------------------c--------------
Q psy11734        592 -----------------------------------------------------------------L--------------  592 (817)
Q Consensus       592 -----------------------------------------------------------------~--------------  592 (817)
                                                                                       +              
T Consensus       126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (394)
T TIGR00883       126 PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHKK  205 (394)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcccc
Confidence                                                                             0              


Q ss_pred             -CchhHHhhcCHh--HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy11734        593 -ETPWAAILSSLP--VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVR  669 (817)
Q Consensus       593 -~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~  669 (817)
                       ..+.++.+++++  ++......++.....+....+.|.|+++++|.+..+.+.......+.+.++.++.|+++||+|||
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~  285 (394)
T TIGR00883       206 KRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR  285 (394)
T ss_pred             ccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence             001223444443  66666677777778888889999999888899999999999999999999999999999999987


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHH-HHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHH-H
Q psy11734        670 DILSRTNVRKVFATLGAVLPGVGALA-ASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSN-G  745 (817)
Q Consensus       670 ~~~~~~~~r~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~-~  745 (817)
                      +.+         ...+.......... .... ..+.+.......+.+++.+...+...+...|..| ++|+++.++.+ .
T Consensus       286 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  356 (394)
T TIGR00883       286 PVL---------IIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNL  356 (394)
T ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHh
Confidence            642         11222222222111 2222 2233444444455555556666777788888888 67999999854 4


Q ss_pred             HHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHH
Q psy11734        746 LGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLF  782 (817)
Q Consensus       746 ~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~  782 (817)
                      ...+++.++|.+.|.+.|+.+.  |+..++...++.+
T Consensus       357 ~~~~g~~~~p~~~g~l~~~~g~--~~~~~~~~~~~~l  391 (394)
T TIGR00883       357 AGAIFGGFAPYIAAALVAMTGD--WYAIGYYLAALAL  391 (394)
T ss_pred             HHHHHhhHHHHHHHHHHHHcCc--chhHHHHHHHHHH
Confidence            4557888999999999998753  6565555554443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.81  E-value=6.3e-20  Score=201.74  Aligned_cols=265  Identities=12%  Similarity=0.073  Sum_probs=198.7

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...|...+++.|++|+|||+++.++.+....+|..++|.+++++.+ ..|||+.|++.++..++..+..+
T Consensus        98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~  176 (365)
T TIGR00900        98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA-TLGIKWAIWVDAVGFAISALLIV  176 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHH
Confidence            37889999999999999999999999999999999999999999999999999999 89999999998766655544433


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      ...++++++++. ++.+.+ ..                                                          
T Consensus       177 ~~~~~~~~~~~~-~~~~~~-~~----------------------------------------------------------  196 (365)
T TIGR00900       177 SVRIPELAASEI-QALSNA-VL----------------------------------------------------------  196 (365)
T ss_pred             hcccccCCCccc-cccchh-HH----------------------------------------------------------
Confidence            332211111000 000000 00                                                          


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHh-hchhhHHHHhhCCccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLIS-TDLPKYMSEVIGLSVA  239 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~-~~~p~~l~~~~g~s~~  239 (817)
                                                   ++.++.++.++|||.++...+..++......... .+.|.|.++.+|.+..
T Consensus       197 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (365)
T TIGR00900       197 -----------------------------RDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGST  247 (365)
T ss_pred             -----------------------------HHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchH
Confidence                                         0012235678899999888888888777777776 8899999988899999


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~  319 (817)
                      +.+.......++..++.++.+++.||.++|+.          ...+..+.++++..+.+.+++.+...+...+.+++.+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  317 (365)
T TIGR00900       248 HYGWVLAAFGLGALLGALLLGLLGRYFKRMAL----------MTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGP  317 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhchhHH----------HHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999988874          55555555555555544432233444444445555555


Q ss_pred             ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ..+.......+..| ++|+++.|+.+...++++.++|.+.|.+.|+.
T Consensus       318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~  364 (365)
T TIGR00900       318 INVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL  364 (365)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            55666666666554 78999999999999999999999999998875

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.81  E-value=1e-19  Score=206.12  Aligned_cols=282  Identities=13%  Similarity=0.121  Sum_probs=190.4

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|++.|...+...+++.+++| ++|+++.|+.+.+..+|..++|++++.+.+ ..|||++|++.+++.++..+..++
T Consensus       115 ~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~-~~gwr~~f~~~~~~~~~~~v~~~~  192 (455)
T TIGR00892       115 GFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE-SFGWRGSFLILGGLLLHCCVCGAL  192 (455)
T ss_pred             HHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH-HhChHHHHHHHHHHHHHHHHHHHH
Confidence            688999999877888899999995 899999999999999999999999999999 899999999999887766655555


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      ..+++++.++..++ +.+    .... +...++......                                         
T Consensus       193 ~~~~~~~~~~~~~~-~~~----~~~~-~~~~~~~~~~~~-----------------------------------------  225 (455)
T TIGR00892       193 MRPVGPSQRVSKSK-SKE----GLPP-DGSTKKLSKKST-----------------------------------------  225 (455)
T ss_pred             hCCCCccccccccc-ccc----cCCC-CCccccccccch-----------------------------------------
Confidence            44332211100000 000    0000 000000000000                                         


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN  241 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a  241 (817)
                                                .++..+....+++|+|+++...+..++...+.+....++|.|+++ +|++..++
T Consensus       226 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~  278 (455)
T TIGR00892       226 --------------------------AEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEA  278 (455)
T ss_pred             --------------------------hhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHH
Confidence                                      000001112368899999988888888888888888999999987 69999999


Q ss_pred             chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcc
Q psy11734        242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCY  321 (817)
Q Consensus       242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~  321 (817)
                      +.+..+.+++.+++++++|+++||...++.      |+.....+....+++++...... +.+...+...+.+.+.+...
T Consensus       279 g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~------~~~~~~~~~~~~~l~~ll~~~~~-~~~~~~i~~~~~G~~~g~~~  351 (455)
T TIGR00892       279 AFLLSIIGFVDIFARPSCGLIAGLKWIRPH------VQYLFSFALLFNGLTHLLCALAG-DYTGLVIYCIFFGLSFGSVG  351 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccCHH------HHHHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHhchHH
Confidence            999999999999999999999997422110      11122233333333333333322 44444444444444555555


Q ss_pred             cccccccccc-CCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        322 ASIRVNPIDL-SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       322 ~~~~~~~~~~-~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      +.......+. ++++++++.|+.+...++|++++|.+.|.+.|..+
T Consensus       352 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g  397 (455)
T TIGR00892       352 ALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK  397 (455)
T ss_pred             HHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC
Confidence            5555555554 55789999999999999999999999999998753

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.81  E-value=4.1e-17  Score=186.32  Aligned_cols=434  Identities=13%  Similarity=0.078  Sum_probs=257.4

Q ss_pred             HHHHhhchh-HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHH-HhhcCccc
Q psy11734        196 WAAILYSLP-VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADF-FIARDILS  273 (817)
Q Consensus       196 ~~~l~~~~~-~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~  273 (817)
                      ..+++|+|+ ++..+...++...++|++..++|.|+++.+|+|..+++..............+++|+++|| +|||+.  
T Consensus        13 ~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~--   90 (500)
T PRK09584         13 SLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRV--   90 (500)
T ss_pred             ChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH--
Confidence            457788885 8899999999999999999999999999899999998887777666666666789999999 599986  


Q ss_pred             chhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-C--chhHHHHHHHhhhhhc
Q psy11734        274 RTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-N--FSGTIMALSNGLGCVS  350 (817)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~--~~g~a~g~~~~~~~lg  350 (817)
                              +..+..+..++...+....++.........+.+.+.+...+.......+..| +  ++..+.++.+...++|
T Consensus        91 --------~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG  162 (500)
T PRK09584         91 --------IMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIG  162 (500)
T ss_pred             --------HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHH
Confidence                    6777777777766665543333333344444455566666666666777655 3  3556889999999999


Q ss_pred             ccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhh
Q psy11734        351 GMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFF  430 (817)
Q Consensus       351 ~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~  430 (817)
                      +.++|.+.|.+.|+.                                             +|++.|.+.++..+++.+.+
T Consensus       163 ~~~gp~i~g~l~~~~---------------------------------------------g~~~~F~i~~i~~~i~~i~~  197 (500)
T PRK09584        163 SFFSMLATPWLAAKY---------------------------------------------GWSVAFALSVVGMLITVVNF  197 (500)
T ss_pred             HHHHHHHHHHHHHhh---------------------------------------------CHHHHHHHHHHHHHHHHHHH
Confidence            999999999988764                                             69999999887766666544


Q ss_pred             eeeccccccc-ccCCCCchh--HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeec
Q psy11734        431 VLFGSGEVQY-WNESILPAR--YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSK  507 (817)
Q Consensus       431 ~~~~~~~~~~-~~~~~~~~~--~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (817)
                      ++..+.-++. .+++..+.+  ...+....+..+....+.. +       .+                            
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~----------------------------  241 (500)
T PRK09584        198 AFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWL-L-------HN----------------------------  241 (500)
T ss_pred             HHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHH-H-------hc----------------------------
Confidence            4432211111 001101111  1111111111111110000 0       00                            


Q ss_pred             ccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHh
Q psy11734        508 TYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEG  587 (817)
Q Consensus       508 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~G  587 (817)
                             .   +                            ..++.....++..     .. .+..  .            
T Consensus       242 -------~---~----------------------------~~~~~~~~~~~~~-----~~-~~~~--~------------  263 (500)
T PRK09584        242 -------Q---E----------------------------IARMALGVVALGI-----VV-IFGK--E------------  263 (500)
T ss_pred             -------c---h----------------------------HHHHHHHHHHHHH-----HH-HHHH--H------------
Confidence                   0   0                            0000000000000     00 0000  0            


Q ss_pred             hhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHH--HhCCCh------hHHHHHHHHHHHHHHHHHHHH
Q psy11734        588 VGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQ--VIGLSV------AENGVLSALPFLIMWLVSMSS  659 (817)
Q Consensus       588 ig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~--~~g~s~------~~~~~~~~~~~~~~~ig~~~~  659 (817)
                           ..+.++.-| ++.+.. +..+.....++......|.++..  ..+.+.      ...+++.++..+..++..++.
T Consensus       264 -----~~~~~~~~~-~~~~~~-~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~  336 (500)
T PRK09584        264 -----AFAMKGAAR-RKMIVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPIL  336 (500)
T ss_pred             -----HhhcCHHHH-HHHHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHH
Confidence                 001111222 222222 22335556677777777777664  222222      125566677777888888888


Q ss_pred             HHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcC--------chHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q psy11734        660 SALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGC--------NTSMVAICFTIGMAFMGFCYASIRVNPIDL  731 (817)
Q Consensus       660 g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (817)
                      +++-+|.++|..      ...-..+++++.+++++.+.....        +.++.+...++.+.+..+..|.......+.
T Consensus       337 ~~~~~~l~~r~~------~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~  410 (500)
T PRK09584        337 AAIYNKMGDRLP------MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQL  410 (500)
T ss_pred             HHHHHHhCcCCC------cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence            777777776531      233445677777777766554321        245666667777777777778888888888


Q ss_pred             CC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc------CC-ccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        732 SP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ------NK-TLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       732 ~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~------~~-g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      .| +.||..+|+......+|+.++..+.+....      .. ..+++...|...+...++..++.+..
T Consensus       411 aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~  478 (500)
T PRK09584        411 VPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLT  478 (500)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            88 789999997765555555555555432211      00 01236677877777766555444443

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.80  E-value=1.9e-19  Score=205.46  Aligned_cols=320  Identities=13%  Similarity=0.106  Sum_probs=200.4

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhh---hhhcccccCcchhHHHHhhhHHHHHh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCS---GLIMSFTASWANVFYIFGAIAVLWFA   77 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~---~~l~~~~~gWr~~f~i~~~~~~i~~~   77 (817)
                      .|+++|+|.+...+...++++|++|+++|++++++.+.+..+|..+++.++   ....+ ..+||++|++.++..++. +
T Consensus       133 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~w~~~f~~~~~~~~~~-~  210 (481)
T TIGR00879       133 GRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNN-TLGWRIPLGLQLIPAGLL-F  210 (481)
T ss_pred             HHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC-CccHHHHHHHHHHHHHHH-H
Confidence            388999999999999999999999999999999999999999999999999   77767 789999999966555444 4


Q ss_pred             hhhheeccCCCCCCC-CCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734         78 FWCILCFNDPKSHPY-ISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL  156 (817)
Q Consensus        78 ~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (817)
                      +..+++||+|+.... .+.++..+...+...   .++++.+..+. ...                               
T Consensus       211 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~-------------------------------  255 (481)
T TIGR00879       211 LGLFFLPESPRWLVGKGRVEEARKSLARLRG---TSGEDKELLDE-LEL-------------------------------  255 (481)
T ss_pred             HHHhcCCCChHHHHHcCChHHHHHHHHHHhC---CCCCcHHHHHH-HHH-------------------------------
Confidence            445556665531100 011110000000000   00000000000 000                               


Q ss_pred             HHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhh------chhHHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734        157 GFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILY------SLPVWSLIISEVGHDYGLYLISTDLPKYM  230 (817)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~i~~~~~~~~~~~~~~~~p~~l  230 (817)
                             .               ...+..+. +. .+..+.++++      .+.++...+..+......+....+.|.++
T Consensus       256 -------~---------------~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (481)
T TIGR00879       256 -------I---------------DIKRSIEK-RS-VQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF  311 (481)
T ss_pred             -------H---------------HHHHHHHH-hh-ccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHH
Confidence                   0               00000000 00 0111333332      23344444444444444455566777777


Q ss_pred             HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhh---ccCCC-----
Q psy11734        231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAAS---YVGCN-----  302 (817)
Q Consensus       231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----  302 (817)
                      ++ +|++..+++....+..++..++.+++|+++||++||+.          ...+..+..+++..+.   ....+     
T Consensus       312 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (481)
T TIGR00879       312 EN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPL----------LLIGAAGMAICLFVLGILGASFVTGSSKS  380 (481)
T ss_pred             HH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH----------HHHHHHHHHHHHHHHHHHhhcccCCcccc
Confidence            65 69999888999999999999999999999999999885          4555555555544443   11111     


Q ss_pred             -hhHHHHHHHHHHHHhh-hccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCcc
Q psy11734        303 -TSMVAIFFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSG  379 (817)
Q Consensus       303 -~~~~~~~~~l~~~~~g-~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~  379 (817)
                       .........+..++.+ ...+.......|..| ++|+++.|+.+...++|++++|.+.+.+.++.              
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~--------------  446 (481)
T TIGR00879       381 SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI--------------  446 (481)
T ss_pred             hhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence             2222222222222222 233445666677666 68999999999999999999999999887764              


Q ss_pred             chhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734        380 TIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE  437 (817)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~  437 (817)
                                                     +|+..|++.+++.+++.++..++.+++
T Consensus       447 -------------------------------~~~~~f~~~~~~~~~~~i~~~~~~~~~  473 (481)
T TIGR00879       447 -------------------------------GVGGVFIFFGGLNVLGLIFVYFFLPET  473 (481)
T ss_pred             -------------------------------CccceehhHHHHHHHHHHHHheecccC
Confidence                                           578888888888888777766655443

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>KOG2504|consensus

Probab=99.80  E-value=4.1e-18  Score=191.91  Aligned_cols=411  Identities=17%  Similarity=0.126  Sum_probs=284.4

Q ss_pred             HHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc
Q psy11734        219 LYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY  298 (817)
Q Consensus       219 ~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (817)
                      .+.+-...+.+. +.++.+..+++++.........+..++.+.+.||+|.|.+          .+.|.++..+++++..+
T Consensus        62 ~~~~Gv~~~~~~-~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v----------~i~G~~v~~~g~~lssF  130 (509)
T KOG2504|consen   62 INSFGLLFEELM-DYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTV----------MIAGGLVAALGLLLSSF  130 (509)
T ss_pred             hheehhhHHHHH-HHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHH----------HHHHHHHHHHHHHHHHH
Confidence            333333344444 4478888889999999999999999999999999999986          88999999999999988


Q ss_pred             cCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCc
Q psy11734        299 VGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFS  378 (817)
Q Consensus       299 ~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~  378 (817)
                      ..+-+...+..=.+.+.+.++.+....+.+...++|+|+.|+|+...-..+|..+-|.+...+.++.             
T Consensus       131 ~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~-------------  197 (509)
T KOG2504|consen  131 ATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY-------------  197 (509)
T ss_pred             HhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh-------------
Confidence            8753444444445555666666776777777888999999999999888888888888877777765             


Q ss_pred             cchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHH
Q psy11734        379 GTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCM  458 (817)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~  458 (817)
                                                      |||+.+++.+.+.+-..+.....++......++...+.+.        
T Consensus       198 --------------------------------G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~--------  237 (509)
T KOG2504|consen  198 --------------------------------GWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRN--------  237 (509)
T ss_pred             --------------------------------CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcc--------
Confidence                                            6999999999988766666666554322211111111110        


Q ss_pred             HHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccc---cccccCChhhHHHHHHHHHHHHH
Q psy11734        459 GVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTL---DAKFDWDERTQGVILSAFYYGYI  535 (817)
Q Consensus       459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~g~~~s~~~~~~~  535 (817)
                                        ..+..+-++++..+...........  ..+++.+..   .++......+....         
T Consensus       238 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---------  288 (509)
T KOG2504|consen  238 ------------------SAASVESTPKPVELRISERDSGLKK--LSLSNLATLKRGPDKWRNSPLQAFLS---------  288 (509)
T ss_pred             ------------------ccccccccccccccccccCCCCCCc--ccccchhhhhhCCccccccchhhhhh---------
Confidence                              0010011111111111000000000  000000000   00000001111000         


Q ss_pred             HhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHH
Q psy11734        536 LTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGH  615 (817)
Q Consensus       536 i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~  615 (817)
                                                        +-                        -.+++++|.++...+...+.
T Consensus       289 ----------------------------------~~------------------------d~~ll~~~~fl~~~~~~~~~  310 (509)
T KOG2504|consen  289 ----------------------------------ML------------------------DLSLLKDPKFLLLALSNLFA  310 (509)
T ss_pred             ----------------------------------hh------------------------hHHHHcCchHHHHHHHHHHH
Confidence                                              11                        15789999999999999999


Q ss_pred             HHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHH
Q psy11734        616 DYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA  695 (817)
Q Consensus       616 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~  695 (817)
                      ..+++....++|.|.++ ++++..+++.+.+..++..+++++..|+++|+...+        ++.....+.+..++..+.
T Consensus       311 ~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~--------~~~~~~~~ll~~gl~~~~  381 (509)
T KOG2504|consen  311 YLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIR--------ALVLFLLTLLIAGLARLF  381 (509)
T ss_pred             HHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccc--------hHHHHHHHHHHHHHHHHH
Confidence            99999999999999995 799999999999999999999999999999998843        233445666666666655


Q ss_pred             HHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHH
Q psy11734        696 ASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF  774 (817)
Q Consensus       696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~  774 (817)
                      ..... +.+.......+.+++.+...+.......|..+ +.-..+.|+...+..++..++|.+.|.+.|.+++  |...|
T Consensus       382 ~p~~~-~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~--Y~~~f  458 (509)
T KOG2504|consen  382 LPFAT-TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGN--YDHAF  458 (509)
T ss_pred             HHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCC--eeeeh
Confidence            55543 44455555555666666555555567777777 8899999999999999999999999999999864  88999


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q psy11734        775 WIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       775 ~~~~~~~~i~~~~~~~~~  792 (817)
                      +.++++.+++...+...+
T Consensus       459 ~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  459 YFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             hhcChHHHHHHHHHHHhH
Confidence            999999999887777665

>PRK15075 citrate-proton symporter; Provisional

Probab=99.80  E-value=3.1e-19  Score=201.29  Aligned_cols=260  Identities=16%  Similarity=0.133  Sum_probs=170.4

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc--------ccccCcchhHHHHhhhH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM--------SFTASWANVFYIFGAIA   72 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~--------~~~~gWr~~f~i~~~~~   72 (817)
                      .|+++|++.|..+|....+++|++|+|+|++++++...+..+|..+++.+++.+.        + ..|||++|++..+..
T Consensus       123 ~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~-~~gWr~~f~~~~~~~  201 (434)
T PRK15075        123 GRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMA-EWGWRIPFLIGCLIV  201 (434)
T ss_pred             HHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHh-ccchHHHHHHHHHHH
Confidence            3899999999999999999999999999999999999998888888888877763        4 689999999854332


Q ss_pred             HHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCcc
Q psy11734         73 VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKH  152 (817)
Q Consensus        73 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (817)
                      .+    . ++.++.+++.+   +...+  .         +++  ++                                  
T Consensus       202 ~~----~-~~~~~~~~e~~---~~~~~--~---------~~~--~~----------------------------------  226 (434)
T PRK15075        202 PF----I-FLIRRSLEETE---EFLAR--K---------HRP--SM----------------------------------  226 (434)
T ss_pred             HH----H-HHHHHhcCCCH---HHHHh--h---------hcc--cc----------------------------------
Confidence            11    1 12232222110   00000  0         000  00                                  


Q ss_pred             chhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHH-HHHHHHHHHHHHHHhhchhhHHH
Q psy11734        153 TLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSL-IISEVGHDYGLYLISTDLPKYMS  231 (817)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~i~~~~~~~~~~~~~~~~p~~l~  231 (817)
                                                              +..++++.++++.+.. ....++.....+....|.|.|++
T Consensus       227 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~  266 (434)
T PRK15075        227 ----------------------------------------REIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGK  266 (434)
T ss_pred             ----------------------------------------ccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                    1113344556555433 34444556677888999999999


Q ss_pred             HhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH-HHHhh-hc-cCCChhHHHH
Q psy11734        232 EVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV-GALAA-SY-VGCNTSMVAI  308 (817)
Q Consensus       232 ~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~~~  308 (817)
                      +.+|++..+++++..+..+++.++.+++|+++||++||+.          ...+..+..+ ..... .. ..++......
T Consensus       267 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (434)
T PRK15075        267 TVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPV----------LIAFTVLAILTAYPALSWLVAAPSFARMLA  336 (434)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH----------HHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence            9889999999998889999999999999999999998875          3333222221 11111 11 1222222222


Q ss_pred             HHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhh-hcccccccccceeccccc
Q psy11734        309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC-VSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~-lg~~~~~~i~g~l~~~~~  366 (817)
                      ...+.+.+.+...+.......|..| ++|+++.|+.+.+.. +++.++|.+.|.+.|+.|
T Consensus       337 ~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g  396 (434)
T PRK15075        337 VELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG  396 (434)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence            2222333344444444455666555 789999999766655 468899999999988763

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.80  E-value=6.5e-19  Score=195.00  Aligned_cols=254  Identities=15%  Similarity=0.175  Sum_probs=182.8

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...+...+++.|++|+|+|++++++......+|..++|.+++.+.+ ..|||+.|++.+.+.++..+...
T Consensus        85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~  163 (377)
T PRK11102         85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV-WFSWHAIFWVLALAAILAAALVF  163 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHH
Confidence            37889999999999999999999999999999999999999999999999999999 89999999998888777766666


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +..||++++++..+.+                     ++                                         
T Consensus       164 ~~~~~~~~~~~~~~~~---------------------~~-----------------------------------------  181 (377)
T PRK11102        164 FFIPETLPKERRQPFH---------------------LR-----------------------------------------  181 (377)
T ss_pred             HhCCccCcccccCCCC---------------------hH-----------------------------------------
Confidence            6666543211100000                     00                                         


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                    +...++++++|+|+++...+..++.....+....+.|.++.+.+|+++.+
T Consensus       182 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~  231 (377)
T PRK11102        182 ------------------------------TTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN  231 (377)
T ss_pred             ------------------------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH
Confidence                                          00123567889999888777777777788888889999998888999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHH---HHHHhhhccCCChhHHHHHHHHHHHHh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPG---VGALAASYVGCNTSMVAIFFTIGMAFM  317 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~  317 (817)
                      .|....+..++..+++++.|++.||+++|+.          ...+..+..   +.+......+.+.+.......+.....
T Consensus       232 ~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (377)
T PRK11102        232 FGYYFALNIVFLFVMTIINSRFVRRVGALNM----------LRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCV  301 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH----------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999875          444443322   222222222222222222222223333


Q ss_pred             hhccccccccccccCCCchhHHHHHHHhhhh-hcccccccc
Q psy11734        318 GFCYASIRVNPIDLSPNFSGTIMALSNGLGC-VSGMVAPLT  357 (817)
Q Consensus       318 g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~-lg~~~~~~i  357 (817)
                      +...+.......|..|++++++.++.+..++ +|+.+++.+
T Consensus       302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~  342 (377)
T PRK11102        302 SMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALL  342 (377)
T ss_pred             HHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence            3333333445567778999999999888766 444444444

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.79  E-value=2.3e-19  Score=199.33  Aligned_cols=258  Identities=11%  Similarity=0.030  Sum_probs=183.7

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|++||++.+...|...+++.|++|+|||+++.|+.+....+|.++||.++|++.+ . .|+..+++.+...++. .+..
T Consensus        94 ~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~-~-~~~~~~~i~~~~~~~~-~~~~  170 (393)
T PRK11195         94 AYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD-P-HAEAALAVCALIYLLA-ALFN  170 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHH-HHHH
Confidence            38899999999999999999999999999999999999999999999999999998 4 4888888776544333 3344


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +.+||+|++++..++++... .+                                                         
T Consensus       171 ~~l~~~~~~~~~~~~~~~~~-~~---------------------------------------------------------  192 (393)
T PRK11195        171 LFIPRLGARRPGQSWNPIAL-LR---------------------------------------------------------  192 (393)
T ss_pred             hcCCCCcccccccCCCHHHH-HH---------------------------------------------------------
Confidence            55665443221110000000 00                                                         


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                    +.++.+++++++|.+........+.........+..|.|+++.+|+++.+
T Consensus       193 ------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~  242 (393)
T PRK11195        193 ------------------------------DFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQ  242 (393)
T ss_pred             ------------------------------HHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH
Confidence                                          00112457788888776666655556666677777888999889999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      .|++..+..++.+++++..+++.||.++++.          +..+... ++....+... ++.+.......+.+.+.+..
T Consensus       243 ~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~----------~~~g~~~-~~~~~~~~~~-~~~~~~~~~~~~~G~~~g~~  310 (393)
T PRK11195        243 PAYLQAVVAIGIAVGAGAAARLVTLETVLRV----------LPAGILM-GLVVLLMALQ-HSLLPAYPLLILIGALGGFF  310 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcccch----------HHHHHHH-HHHHHHHHHH-hHHHHHHHHHHHHHHhhhhh
Confidence            9999999999999999999999998877764          4444432 3333233332 23443444444455555555


Q ss_pred             cccccccccccCCCc--hhHHHHHHHhhhhhccccccccccee
Q psy11734        321 YASIRVNPIDLSPNF--SGTIMALSNGLGCVSGMVAPLTVGFL  361 (817)
Q Consensus       321 ~~~~~~~~~~~~p~~--~g~a~g~~~~~~~lg~~~~~~i~g~l  361 (817)
                      .+......++..|++  +|++.++.|+.++++..++..+.+.+
T Consensus       311 ~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~  353 (393)
T PRK11195        311 VVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL  353 (393)
T ss_pred             hhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH
Confidence            555555666777753  69999999999999999999998854

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.79  E-value=2e-17  Score=209.23  Aligned_cols=385  Identities=12%  Similarity=0.030  Sum_probs=252.3

Q ss_pred             HHHhhchhHHHHHHHHHHHHHHHHHHhhchhhH----HHHhhCCc-ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCc
Q psy11734        197 AAILYSLPVWSLIISEVGHDYGLYLISTDLPKY----MSEVIGLS-VAENGVLSALPFLIMWLVSMSSSALADFFIARDI  271 (817)
Q Consensus       197 ~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~----l~~~~g~s-~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~  271 (817)
                      ..+++++.+...++..++....-+....-++.+    +.+..+.+ ....++......+..++.++++|+++||++||++
T Consensus         5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~   84 (1140)
T PRK06814          5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL   84 (1140)
T ss_pred             hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence            457888888777777666555543332222212    22211111 2345677777889999999999999999999974


Q ss_pred             ccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhc
Q psy11734        272 LSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVS  350 (817)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg  350 (817)
                      .      +.+........+.+.  +.+..++.+..++..++.+.+.++..+...+.+.+..| ++++.++|+.++..++|
T Consensus        85 ~------~~~~~~~~~~~~~~~--~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig  156 (1140)
T PRK06814         85 A------KILKFAEIGIAALAI--YGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIA  156 (1140)
T ss_pred             H------HHHHHHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHH
Confidence            1      011112222222211  12222356666666666677777777777777767555 78999999999999999


Q ss_pred             ccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhh
Q psy11734        351 GMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFF  430 (817)
Q Consensus       351 ~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~  430 (817)
                      .++||.++|.+.+..                                             +|+..|+..+++.+++.++.
T Consensus       157 ~~igp~l~g~l~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~  191 (1140)
T PRK06814        157 ILLGTIIGGLATISG---------------------------------------------NFVILVALLMGIAVLGWLAS  191 (1140)
T ss_pred             HHHHHHHHHHHHhcc---------------------------------------------ccHHHHHHHHHHHHHHHHHH
Confidence            999999999987654                                             68888855555555555554


Q ss_pred             eeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccc
Q psy11734        431 VLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYT  510 (817)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (817)
                      .++.+.+++. +..  +.                                                              
T Consensus       192 ~~~~~~~~~~-~~~--~~--------------------------------------------------------------  206 (1140)
T PRK06814        192 LFIPKTGNAA-PDL--KI--------------------------------------------------------------  206 (1140)
T ss_pred             hhCCCCCCCC-CCC--ee--------------------------------------------------------------
Confidence            4443322111 000  00                                                              


Q ss_pred             cccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhc
Q psy11734        511 TLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGE  590 (817)
Q Consensus       511 ~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~  590 (817)
                          +.  +..                                                  .  +.              
T Consensus       207 ----~~--~~~--------------------------------------------------~--~~--------------  214 (1140)
T PRK06814        207 ----DR--NII--------------------------------------------------R--ST--------------  214 (1140)
T ss_pred             ----cc--chH--------------------------------------------------H--HH--------------
Confidence                00  000                                                  0  00              


Q ss_pred             ccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy11734        591 DLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRD  670 (817)
Q Consensus       591 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~  670 (817)
                        ...++.+.++|.+|...+..++.......+..++|.|+++.+|.++.+.+.+.+...+++++|.++.|+++||..+++
T Consensus       215 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~  292 (1140)
T PRK06814        215 --ITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL  292 (1140)
T ss_pred             --HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee
Confidence              012456678899999988888888888889999999999999999999999999999999999999999998877665


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHhh-------------------cCchHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q psy11734        671 ILSRTNVRKVFATLGAVLPGVGALAASYV-------------------GCNTSMVAICFTIGMAFMGFCYASIRVNPIDL  731 (817)
Q Consensus       671 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (817)
                      .+.          .+.++.+++.+.+.+.                   ..+.+...+..++.+++.+...+...+..++.
T Consensus       293 ~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  362 (1140)
T PRK06814        293 YVP----------IGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAW  362 (1140)
T ss_pred             eeh----------HHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Confidence            432          2333332322222221                   12344455555556666666666777788887


Q ss_pred             CC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHH
Q psy11734        732 SP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISN  785 (817)
Q Consensus       732 ~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~  785 (817)
                      .| +.+|+++|+.+++.+++..+++.+.|.+.+..  .++...+++++.+.++..
T Consensus       363 ~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~  415 (1140)
T PRK06814        363 ANPAHRARVIAANNVLNAAFMVAGTIILALLQALG--FSIPWIILFIALANLIVA  415 (1140)
T ss_pred             CCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHH
Confidence            77 78999999999999999999999999987654  225555555555444433

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.79  E-value=4.2e-19  Score=197.23  Aligned_cols=262  Identities=18%  Similarity=0.231  Sum_probs=185.5

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc--------ccccCcchhHHHHhhhH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM--------SFTASWANVFYIFGAIA   72 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~--------~~~~gWr~~f~i~~~~~   72 (817)
                      .|+++|++.+...+...+++.|++|+|||+++.++...+..+|..+++.++..+.        + ..+||+.|++.+++.
T Consensus       102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~-~~~w~~~~~~~~~~~  180 (394)
T TIGR00883       102 ARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALL-EWGWRIPFLVSAVLV  180 (394)
T ss_pred             HHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhh-ccchHHHHHHHHHHH
Confidence            3899999999999999999999999999999999999999999999999877653        3 579999999877655


Q ss_pred             HHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCcc
Q psy11734         73 VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKH  152 (817)
Q Consensus        73 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (817)
                      ++...+ ....||+|+   +  +++++       +    +                                        
T Consensus       181 ~~~~~~-~~~~~~~~~---~--~~~~~-------~----~----------------------------------------  203 (394)
T TIGR00883       181 LIGLYL-RRNLEETPV---F--EKAQE-------K----H----------------------------------------  203 (394)
T ss_pred             HHHHHH-HHhcCCChh---H--HHHHh-------c----c----------------------------------------
Confidence            544332 222233221   1  00000       0    0                                        


Q ss_pred             chhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchh--HHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734        153 TLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLP--VWSLIISEVGHDYGLYLISTDLPKYM  230 (817)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~i~~~~~~~~~~~~~~~~p~~l  230 (817)
                                                           ++.+.+.++.++++.  ++......++.....+....+.|.|+
T Consensus       204 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (394)
T TIGR00883       204 -------------------------------------KKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYL  246 (394)
T ss_pred             -------------------------------------ccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                 001224566677765  77777777788888888889999999


Q ss_pred             HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHh-hhcc-CCChhHHHH
Q psy11734        231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALA-ASYV-GCNTSMVAI  308 (817)
Q Consensus       231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~  308 (817)
                      ++.+|.+..+.+....+..+++.++.++.|+++||++||+.         ....+......+... .... .++......
T Consensus       247 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (394)
T TIGR00883       247 TQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPV---------LIIFTVLAALLAVPLLMALLDSGSFTLFFF  317 (394)
T ss_pred             HHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH---------HHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence            88889999999999999999999999999999999998874         122222222222111 1122 223333334


Q ss_pred             HHHHHHHHhhhccccccccccccCC-CchhHHHHHHH-hhhhhcccccccccceeccccc
Q psy11734        309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSN-GLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~-~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      ...+.+++.+...+.......|..| ++|+++.++.+ ....+|+.++|.+.|.+.|+.|
T Consensus       318 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g  377 (394)
T TIGR00883       318 LVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG  377 (394)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence            4444445555555666677777666 78999999854 4556889999999999998864

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.79  E-value=3.5e-19  Score=199.97  Aligned_cols=258  Identities=15%  Similarity=0.034  Sum_probs=188.1

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|++.+...+...+.+.|++|+++|+++.++.....++|..+||.+++.+.+ ..||||.|++.+...++..+.. +
T Consensus       117 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~-~~~~~~~~~~~~~~~~~~~~~~-~  194 (417)
T PRK10489        117 GLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA-AGGVAWNYGLAAAGTFITLLPL-L  194 (417)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHH-H
Confidence            7788998888888999999999999999999999999999999999999999998 8899999998876666554443 3


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      .+|+++++++   +++.        .    .                                                 
T Consensus       195 ~l~~~~~~~~---~~~~--------~----~-------------------------------------------------  210 (417)
T PRK10489        195 RLPALPPPPQ---PREH--------P----L-------------------------------------------------  210 (417)
T ss_pred             hCCCCCCCCc---cccc--------c----h-------------------------------------------------
Confidence            3444322110   0000        0    0                                                 


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN  241 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a  241 (817)
                                                  ++.+.+++.++|+|.++...+..++.. ...+...++|.|+++.+|+++.+.
T Consensus       211 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~  261 (417)
T PRK10489        211 ----------------------------RSLLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQI  261 (417)
T ss_pred             ----------------------------HHHHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHh
Confidence                                        000123556778888766655554433 345677889999999889999999


Q ss_pred             chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcc
Q psy11734        242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCY  321 (817)
Q Consensus       242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~  321 (817)
                      |++.....++.++++++.+++.||.++++.          +..+..+..+++..+...+ +.........+.+.+.+...
T Consensus       262 g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~  330 (417)
T PRK10489        262 GLLYAAVPLGAALGALTSGWLAHSARPGLL----------MLLSTLGSFLAVGLFGLMP-MWILAVLCLALFGYLSAISS  330 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCcchH----------HHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999998665553          4455555555555544433 44444444444444444444


Q ss_pred             ccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        322 ASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       322 ~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      +......++..| ++||+++|+.+...++|.++||.+.|.+.|..
T Consensus       331 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~  375 (417)
T PRK10489        331 LLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM  375 (417)
T ss_pred             HHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh
Confidence            445566677666 68999999999999999999999999998875

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.79  E-value=1.6e-17  Score=170.53  Aligned_cols=261  Identities=18%  Similarity=0.193  Sum_probs=211.6

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---
Q psy11734        515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---  591 (817)
Q Consensus       515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---  591 (817)
                      |+|+|.++.|++.++..+++++.+++..+++.|+|.++.+..++++.++++++-...   +.+.|+.+-.+.|.|.+   
T Consensus        41 ~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~---~~~~L~~gt~l~G~gIav~n  117 (395)
T COG2807          41 DLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG---GLPLLFLGTLLAGAGIAVIN  117 (395)
T ss_pred             HhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHhhHHHHH
Confidence            999999999999999999999999999999999999999999999999999999886   57788999999998888   


Q ss_pred             -------------------------------------------------------------------c------------
Q psy11734        592 -------------------------------------------------------------------L------------  592 (817)
Q Consensus       592 -------------------------------------------------------------------~------------  592 (817)
                                                                                         .            
T Consensus       118 VLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~~  197 (395)
T COG2807         118 VLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQAASIATK  197 (395)
T ss_pred             HhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Confidence                                                                               0            


Q ss_pred             CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy11734        593 ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDIL  672 (817)
Q Consensus       593 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~  672 (817)
                      ..+-.+++|+|..|.+.+...+.+..+|.+..|+|.++.| .|+|.+++|.+.++..+.+++.+++...+.+|...++. 
T Consensus       198 ~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~-  275 (395)
T COG2807         198 LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRP-  275 (395)
T ss_pred             cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccch-
Confidence            1112357899999999999999999999999999999999 69999999999999999999999999999999554332 


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhhcCc-hHHHHHHHHHHHHHHhhhhhhhhhhccccC--CCchHHHHHHHHHHHHH
Q psy11734        673 SRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAICFTIGMAFMGFCYASIRVNPIDLS--PNFSGTIMALSNGLGCV  749 (817)
Q Consensus       673 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~  749 (817)
                              +.+....++.++.+.+.+.+.+ ++..   .++.+++.+..++..-+.+.+..  |+..+.-.|+.+.++++
T Consensus       276 --------~~~~~~~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYl  344 (395)
T COG2807         276 --------LVVLALLLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYL  344 (395)
T ss_pred             --------HHHHHHHHHHHHHHHHHHhhhhHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHH
Confidence                    2334444444555555554321 2222   34455555566666665555544  47899999999999999


Q ss_pred             HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        750 SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       750 g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                      -+.++|.+.|++.|..|  +|...+.......++..+.-+...|
T Consensus       345 lAa~GP~l~G~lhDa~g--sw~~~~~~l~~~~i~m~i~Gl~a~r  386 (395)
T COG2807         345 LAAFGPWLFGFLHDATG--SWSAPLVLLALATLLMLIFGLRAGR  386 (395)
T ss_pred             HHhhhhhhHhHHHHhcC--ChHHHHHHHHHHHHHHHHHHhhcch
Confidence            99999999999999995  4988888888777776666665533

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.79  E-value=6.1e-19  Score=201.20  Aligned_cols=285  Identities=14%  Similarity=0.171  Sum_probs=203.4

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHHhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      |+++|++.+...+...+++.|++|+|||+++.++...+..+|.++++.+++++.+ . .|||++|++.+.+.++..+..+
T Consensus       114 ~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~-~~~GWr~~f~i~a~l~ll~~l~~~  192 (491)
T PRK11010        114 AVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLAD-RYLGWQGMYWLMAALLIPCIIATL  192 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHHHHHHHH
Confidence            5677888888889999999999999999999999999999999999999999988 5 5999999999887776655444


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      + .||+++.++   +++..       .                                                     
T Consensus       193 ~-~~e~~~~~~---~~~~~-------~-----------------------------------------------------  208 (491)
T PRK11010        193 L-APEPTDTIP---VPKTL-------E-----------------------------------------------------  208 (491)
T ss_pred             h-cCCCccccc---cccch-------h-----------------------------------------------------
Confidence            3 555332110   00000       0                                                     


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                   ++...++++++++|+.+...+..++.....+....+.|.|+.+.+|+|..+
T Consensus       209 -----------------------------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~  259 (491)
T PRK11010        209 -----------------------------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGE  259 (491)
T ss_pred             -----------------------------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence                                         000224667888888877766666666666777788899988778999999


Q ss_pred             cchhhh-hhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHH---HhhhccCCChhHHHHHHHHHHHH
Q psy11734        241 NGVLSA-LPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGA---LAASYVGCNTSMVAIFFTIGMAF  316 (817)
Q Consensus       241 ag~~~~-~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~  316 (817)
                      .+.+.. ...++.+++.+++|+++||+++|+.          ...+..+..+..   ..+....++.........+....
T Consensus       260 ~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~----------l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~  329 (491)
T PRK11010        260 VGLVNKTLGLLATIVGALYGGILMQRLSLFRA----------LMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLC  329 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH----------HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence            999874 5668999999999999999998874          333333222222   22222222332322233332233


Q ss_pred             hhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccc
Q psy11734        317 MGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMV  395 (817)
Q Consensus       317 ~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (817)
                      .+...+...+...+..+ +.+++..|+.|....+|..+++.+.|.+.|..                              
T Consensus       330 ~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~------------------------------  379 (491)
T PRK11010        330 GGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH------------------------------  379 (491)
T ss_pred             HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------------------
Confidence            33333444455555444 68999999999999999999999999988865                              


Q ss_pred             ccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734        396 APLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS  435 (817)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~  435 (817)
                                     ||+..|.+.+++.+.+.++..+.++
T Consensus       380 ---------------G~~~~f~~~~~~~l~~l~~~~~~~~  404 (491)
T PRK11010        380 ---------------GWPTFYLFSVAAAVPGLLLLLVCRQ  404 (491)
T ss_pred             ---------------ChHHHHHHHHHHHHHHHHHHHHHHh
Confidence                           5899999999999988877766543

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.79  E-value=3.5e-19  Score=196.62  Aligned_cols=281  Identities=11%  Similarity=0.052  Sum_probs=193.2

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc-----c------------cccCcch
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM-----S------------FTASWAN   63 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~-----~------------~~~gWr~   63 (817)
                      +|++.|++ |..++.....+++|||+||||+++|+.....++|..+++++...++     +            ...+||.
T Consensus       134 ~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~  212 (462)
T PRK15034        134 IALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLAN  212 (462)
T ss_pred             HHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHH
Confidence            37899997 6699999999999999999999999997666677766665554433     1            0345888


Q ss_pred             hHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccc
Q psy11734         64 VFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGI  143 (817)
Q Consensus        64 ~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (817)
                      ++++..++.++..++.+++.+|+|+.+.                                                    
T Consensus       213 ~~~~~~~~~iv~~i~~~~~~~~~~~~~~----------------------------------------------------  240 (462)
T PRK15034        213 AAWIWVPLLAIATIAAWSGMNDIASSRA----------------------------------------------------  240 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCcccccc----------------------------------------------------
Confidence            8888888888777777776544332100                                                    


Q ss_pred             cccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHh
Q psy11734        144 LSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLIS  223 (817)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~  223 (817)
                                                                      .....++++|+|+.|...+.+++.++++.++.
T Consensus       241 ------------------------------------------------~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s  272 (462)
T PRK15034        241 ------------------------------------------------SIADQLPVLQRLHLWLLSLLYLATFGSFIGFS  272 (462)
T ss_pred             ------------------------------------------------CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHH
Confidence                                                            01125678999999999999999999999999


Q ss_pred             hchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHh-hhccCC-
Q psy11734        224 TDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALA-ASYVGC-  301 (817)
Q Consensus       224 ~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-  301 (817)
                      .++|.|+++.+  +............+.+.+.++++|+++||+|+++.          ...+.+.+.++... ....+. 
T Consensus       273 ~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v----------l~~~~i~~~i~~~~~~l~lp~~  340 (462)
T PRK15034        273 AGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV----------TLINFIFMAIFSALLFLTLPGT  340 (462)
T ss_pred             HHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH----------HHHHHHHHHHHHHHHHHHhccc
Confidence            99999998854  43333333444568889999999999999999985          44454444443322 222221 


Q ss_pred             ---ChhHHHHHHHHHHHHhhhccccccccccccCC----------------------CchhHHHHHHHhhhhhccccccc
Q psy11734        302 ---NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP----------------------NFSGTIMALSNGLGCVSGMVAPL  356 (817)
Q Consensus       302 ---~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p----------------------~~~g~a~g~~~~~~~lg~~~~~~  356 (817)
                         +.......+.......|.....+.-.+.+..|                      ++.|.+.|+.+..+.+|+.+-|.
T Consensus       341 ~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~  420 (462)
T PRK15034        341 GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQ  420 (462)
T ss_pred             cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhH
Confidence               11222222222223333333333222222222                      26889999999999999999999


Q ss_pred             ccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734        357 TVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG  436 (817)
Q Consensus       357 i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~  436 (817)
                      +.|...+.+|                                            ++...|+...+..+++.++....+.|
T Consensus       421 ~~g~~~~~~g--------------------------------------------~~~~~~~~~~~~~~~~~~~~w~~y~r  456 (462)
T PRK15034        421 AFGMSLNMTG--------------------------------------------SPVGAMKVFLIFYIVCVLLTWLVYGR  456 (462)
T ss_pred             HHHHHHHHcC--------------------------------------------CcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9998887765                                            57888888888888888776665544


Q ss_pred             cc
Q psy11734        437 EV  438 (817)
Q Consensus       437 ~~  438 (817)
                      +.
T Consensus       457 ~~  458 (462)
T PRK15034        457 RK  458 (462)
T ss_pred             CC
Confidence            43

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.79  E-value=4.4e-17  Score=181.28  Aligned_cols=369  Identities=13%  Similarity=0.052  Sum_probs=234.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhh--hhhHHHHHHHHhhh-HHHHHHHhhcCcccchhhHHHH
Q psy11734        205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLS--ALPFLIMWLVSMSS-SALADFFIARDILSRTNVRKVF  281 (817)
Q Consensus       205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~--~~~~i~~~ig~~~~-G~l~dk~g~r~~~~~~~~~~~~  281 (817)
                      +......++.++..+......+|.|+++ +|+|..+.|+..  ..+.+...+.+++. ++.+||.||||.         .
T Consensus         3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~---------~   72 (390)
T TIGR02718         3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRS---------W   72 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchh---------H
Confidence            4556667777888888888999999998 599999999963  45567777777777 447898888875         1


Q ss_pred             HHHHhHHHHHHHHhhhcc--CCC-hhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhcccccccc
Q psy11734        282 ATLGAVLPGVGALAASYV--GCN-TSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLT  357 (817)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i  357 (817)
                      +.....+.......+...  ..+ ..+.........++.....+.......+ ..+++++...+.......+|..+++..
T Consensus        73 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~  152 (390)
T TIGR02718        73 VLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAG  152 (390)
T ss_pred             HHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            222222222122222211  111 2222222222222222233333434333 334566777777777667777777777


Q ss_pred             cceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734        358 VGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE  437 (817)
Q Consensus       358 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~  437 (817)
                      .+.+.++.                                             +|+..|++.+++.++..+..+++.+++
T Consensus       153 ~~~l~~~~---------------------------------------------gw~~~f~~~a~l~~~~~~~~~~~~~~~  187 (390)
T TIGR02718       153 TLVLFGKF---------------------------------------------GQRPAFLLVACVPLASLVCVLWLKDRA  187 (390)
T ss_pred             HHHHHHHh---------------------------------------------CHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            77776664                                             699999999988877666654443321


Q ss_pred             cccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccccc
Q psy11734        438 VQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFD  517 (817)
Q Consensus       438 ~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (817)
                      +++ +++                                                                      +- 
T Consensus       188 ~~~-~~~----------------------------------------------------------------------~~-  195 (390)
T TIGR02718       188 VAS-PEA----------------------------------------------------------------------PL-  195 (390)
T ss_pred             cCc-ccc----------------------------------------------------------------------ch-
Confidence            110 000                                                                      00 


Q ss_pred             CChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhH
Q psy11734        518 WDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWA  597 (817)
Q Consensus       518 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~  597 (817)
                                                       +                    +                    ..+++
T Consensus       196 ---------------------------------~--------------------~--------------------~~~~~  202 (390)
T TIGR02718       196 ---------------------------------A--------------------R--------------------RASLF  202 (390)
T ss_pred             ---------------------------------h--------------------h--------------------HHHHH
Confidence                                             0                    0                    01245


Q ss_pred             HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcccccccch
Q psy11734        598 AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF-LIMWLVSMSSSALADYLIVRDILSRTN  676 (817)
Q Consensus       598 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~g~~~~~~~~~  676 (817)
                      +.+|+|..+......++..........+.|.|++| .|+++++++....... ...+++.+.+|++.||+|+|+.+    
T Consensus       203 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l----  277 (390)
T TIGR02718       203 RFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF----  277 (390)
T ss_pred             HHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH----
Confidence            67888888888888888888888888899999988 6999999999888776 46778899999999999987653    


Q ss_pred             hhHHHHHHHHHHHHHHH-HHHHhh----cCchHHHHHHHHHHHHHHhhhhhhhhhhccc-cCC-CchHHHHHHHHHHHHH
Q psy11734        677 VRKVFATLGAVLPGVGA-LAASYV----GCNTSMVAICFTIGMAFMGFCYASIRVNPID-LSP-NFSGTIMALSNGLGCV  749 (817)
Q Consensus       677 ~r~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~g~~~g~~~~~~~~  749 (817)
                            ..+..+.++.. ..+...    ..+.........+..+..+...+.......+ ..+ +++++.+++.+...++
T Consensus       278 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l  351 (390)
T TIGR02718       278 ------ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDL  351 (390)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence                  23333221211 111111    1122222223333334445555555544433 344 7899999999999999


Q ss_pred             HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHH
Q psy11734        750 SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVF  787 (817)
Q Consensus       750 g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~  787 (817)
                      |..++|.+.|.+.|..|   |+..|...+++.+++.+.
T Consensus       352 g~~~g~~~~G~l~~~~G---~~~~f~~~~~~~l~a~~~  386 (390)
T TIGR02718       352 GELIASSIAGYLTDRFG---YAGGFLSGTVLAVLAILL  386 (390)
T ss_pred             HHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHH
Confidence            99999999999999875   778888877777766544

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.79  E-value=4.9e-19  Score=199.47  Aligned_cols=268  Identities=13%  Similarity=0.121  Sum_probs=179.2

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|+|.|..++....++.|++|+|+|+++.++...+..+|..+++.+.+.+.+ ..|||+.|++.....++.    +
T Consensus       112 ~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~-~~~w~~~f~i~~~~~~~~----~  186 (426)
T PRK12307        112 SRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE-AYGWRAAFFVGLLPVLLV----I  186 (426)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc-cCCHHHHHHHHHHHHHHH----H
Confidence            38999999999999999999999999999999999999999999999999999999 899999999854332221    1


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      ++....|+++++   ++++. .      +..++.+.+|++                                        
T Consensus       187 ~~~~~~p~~~~~---~~~~~-~------~~~~~~~~~~~~----------------------------------------  216 (426)
T PRK12307        187 YIRARAPESKEW---EEAKL-S------GKGKHSQSAWSV----------------------------------------  216 (426)
T ss_pred             HHHHHCCCChHH---HHhhh-h------ccccccccchhh----------------------------------------
Confidence            111222332211   00000 0      000000001100                                        


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHH---HHHHHHHHHHHhhchhhHHHHhhCCc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIIS---EVGHDYGLYLISTDLPKYMSEVIGLS  237 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~---~~~~~~~~~~~~~~~p~~l~~~~g~s  237 (817)
                                                     .+.++++++|+|.++.....   .++.....+.+..++|.|+++ .|++
T Consensus       217 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~  264 (426)
T PRK12307        217 -------------------------------FSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFD  264 (426)
T ss_pred             -------------------------------hhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC
Confidence                                           12246788888887644333   223333444567889999987 5999


Q ss_pred             ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHh
Q psy11734        238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFM  317 (817)
Q Consensus       238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  317 (817)
                      +.+.+.......+++++++++.|++.||+++|+.          ...+.++..+....+.....+.......+..+....
T Consensus       265 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (426)
T PRK12307        265 TGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKT----------FSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMAT  334 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence            9999988888999999999999999999998875          555555544444433332222222222222221111


Q ss_pred             -hhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        318 -GFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       318 -g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                       ....+.......|..| +++|+++|+.+.+..+++.++|.+.|.+.|..
T Consensus       335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~  384 (426)
T PRK12307        335 NVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM  384 (426)
T ss_pred             cccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence             1112233445566666 78999999999999999999999999988775

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.79  E-value=1.2e-19  Score=198.65  Aligned_cols=257  Identities=23%  Similarity=0.349  Sum_probs=191.4

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...|...+++.|++|+|||++++++......+|..++|.+++.+.+ ..|||+.|++.+++.++..++..
T Consensus        91 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~~~~~~~~~~~~~~~~~~il~~  169 (352)
T PF07690_consen   91 ARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS-YFGWRWAFLISAILSLIAAILFI  169 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HCHHCCHHHHHHHHHHHHHHHHH
T ss_pred             hccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh-ccccccccccccchhhhhhhhHh
Confidence            37899999999999999999999999999999999999999999999999999998 89999999999998888877655


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      .+++++|++++..++++.+            ++.                                              
T Consensus       170 ~~~~~~~~~~~~~~~~~~~------------~~~----------------------------------------------  191 (352)
T PF07690_consen  170 LFLPEPPPPRERESPKESE------------SKK----------------------------------------------  191 (352)
T ss_dssp             CCC---STTTT--SSTTTT--------------H----------------------------------------------
T ss_pred             hhhhhcccccccccccccc------------ccc----------------------------------------------
Confidence            5655544333221111110            000                                              


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCch-HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCc-c
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP-WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLS-V  238 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s-~  238 (817)
                                                   +++..+ ++.++++|.+|...+..++.....+....+.|.|+++.+|++ .
T Consensus       192 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  242 (352)
T PF07690_consen  192 -----------------------------PKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGP  242 (352)
T ss_dssp             -----------------------------HHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTH
T ss_pred             -----------------------------ccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHH
Confidence                                         001112 567788888886677777777788889999999988889999 7


Q ss_pred             cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC--CChhHHHHHHHHHHHH
Q psy11734        239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG--CNTSMVAIFFTIGMAF  316 (817)
Q Consensus       239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~  316 (817)
                      .+.+.......+.+.+++++.|+++||+++|+.          .........+....+....  ++..+......+.+.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  312 (352)
T PF07690_consen  243 SQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRR----------LLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFG  312 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH----------HHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH----------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            899999999999999999999999999987653          2233333333333332221  2334444444555556


Q ss_pred             hhhccccccccccccCC-CchhHHHHHHHhhhhhcccccc
Q psy11734        317 MGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAP  355 (817)
Q Consensus       317 ~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~  355 (817)
                      .+...+.......+..| +++|++.|+.+..+++|+.++|
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP  352 (352)
T PF07690_consen  313 FGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP  352 (352)
T ss_dssp             HHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            66777777777777665 8999999999999999999886

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.79  E-value=5.4e-19  Score=196.71  Aligned_cols=270  Identities=13%  Similarity=0.095  Sum_probs=189.8

Q ss_pred             cccccchhhhhhhhccCCCCc--chhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhheeccC
Q psy11734          9 KGTTFPALCTLLAQWSPPNER--SFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFND   86 (817)
Q Consensus         9 ~g~~~~~~~~~i~~~~p~~~r--g~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~   86 (817)
                      .+...|...+++.|+.|+++|  +...++..++.++|.++||++++.+.+ +.|||+.|++.++..++..+..++++||+
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~-~~gw~~~f~~~~~~~~~~~~~~~~~~~~~  197 (393)
T PRK15011        119 GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM-GFSFTVMYLSAAVAFIVCGVMVWLFLPSM  197 (393)
T ss_pred             HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence            446788888888998877666  345688899999999999999999999 89999999999988888877777777776


Q ss_pred             CCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHh
Q psy11734         87 PKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTL  166 (817)
Q Consensus        87 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (817)
                      |++++..+ ++         .     +.                                                    
T Consensus       198 ~~~~~~~~-~~---------~-----~~----------------------------------------------------  210 (393)
T PRK15011        198 RKELPLAT-GT---------L-----EA----------------------------------------------------  210 (393)
T ss_pred             CCCCcccc-cc---------c-----cc----------------------------------------------------
Confidence            43221100 00         0     00                                                    


Q ss_pred             hhhcccCcCCchhhhHHhhhccCcccCchHHHHhhc-hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhh
Q psy11734        167 LTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYS-LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLS  245 (817)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~  245 (817)
                                                   .   .++ +..+.............+.+..+.|.|+++.+|++..+++.+.
T Consensus       211 -----------------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~  258 (393)
T PRK15011        211 -----------------------------P---RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMM  258 (393)
T ss_pred             -----------------------------c---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence                                         0   001 1122222333333445555667899999988899999999888


Q ss_pred             hhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcccccc
Q psy11734        246 ALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIR  325 (817)
Q Consensus       246 ~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~  325 (817)
                      ....++.+++.++.|+++||+++|+.          ...+.....+.+...... ++.........+..+..+...+...
T Consensus       259 ~~~~~~~i~~~~~~G~l~dr~g~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~~~g~~~~~~~  327 (393)
T PRK15011        259 GTAAGLEIPTMLIAGYFAKRLGKRFL----------MRVAAVAGVCFYAGMLMA-HSPAILLGLQLLNAIYIGILGGIGM  327 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhChHHH----------HHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            77778888999999999999999874          334444333333333322 2333333333434444444444445


Q ss_pred             ccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccccccccc
Q psy11734        326 VNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  405 (817)
Q Consensus       326 ~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (817)
                      ....|..|+++++++++.+...++|.+++|.+.|.+.|..                                        
T Consensus       328 ~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~----------------------------------------  367 (393)
T PRK15011        328 LYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW----------------------------------------  367 (393)
T ss_pred             HHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------------------------
Confidence            5667888888999999999999999999999999988764                                        


Q ss_pred             CCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734        406 NKTLSEWRVVFWIMFLALVISNVFFVLFG  434 (817)
Q Consensus       406 ~~~~~~~~~~f~i~~~~~~~~~~~~~~~~  434 (817)
                           +|+..|++.+++.+++.+..++.+
T Consensus       368 -----g~~~~~~~~~~~~~~~~~~~~~~~  391 (393)
T PRK15011        368 -----NYHAVFWFALVMIIATLFCLLRIK  391 (393)
T ss_pred             -----hhHHHHHHHHHHHHHHHHHHHhhc
Confidence                 689999988888888887776653

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.79  E-value=5.5e-19  Score=202.28  Aligned_cols=282  Identities=12%  Similarity=0.129  Sum_probs=173.1

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc--------ccccCcchhHHHHhhhH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM--------SFTASWANVFYIFGAIA   72 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~--------~~~~gWr~~f~i~~~~~   72 (817)
                      .|+++|++.|+..|...++++|++|+|||++++++.+.+..+|..+++.+++.+.        + ..|||++|++.+++.
T Consensus       126 ~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~gWr~~f~~~~~~~  204 (479)
T PRK10077        126 YRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLN-TDGWRYMFASEAIPA  204 (479)
T ss_pred             HHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccc-cCChHHHHHHHHHHH
Confidence            3899999999999999999999999999999999999999999999988776553        3 579999999988877


Q ss_pred             HHHHhhhhheeccCCCCCC-CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCc
Q psy11734         73 VLWFAFWCILCFNDPKSHP-YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGK  151 (817)
Q Consensus        73 ~i~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (817)
                      ++..+. .+++||+|+... ..+.++.....++.......++   ..++                               
T Consensus       205 ~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------------------  249 (479)
T PRK10077        205 LLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQ---ALQE-------------------------------  249 (479)
T ss_pred             HHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHH---HHHH-------------------------------
Confidence            776544 555676653210 0011111111111000000000   0000                               


Q ss_pred             cchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhc--hh-HHHHHHHHHHHHHHHHHHhhchhh
Q psy11734        152 HTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYS--LP-VWSLIISEVGHDYGLYLISTDLPK  228 (817)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~-~~~~~i~~~~~~~~~~~~~~~~p~  228 (817)
                                                       .+...+++....+..+..  .. +.......+......+...++.|.
T Consensus       250 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  296 (479)
T PRK10077        250 ---------------------------------IKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPE  296 (479)
T ss_pred             ---------------------------------HHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence                                             000000000000011110  00 111112222233344556677788


Q ss_pred             HHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc--CCC-hhH
Q psy11734        229 YMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV--GCN-TSM  305 (817)
Q Consensus       229 ~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~  305 (817)
                      ++++ .|++..+.++...+.++..+++.+++|+++||++||+.          ...+..+..++...+...  .+. ...
T Consensus       297 i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~----------~i~~~~~~~v~~~~l~~~~~~~~~~~~  365 (479)
T PRK10077        297 IFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPL----------QIIGALGMAIGMFSLGTAFYTQAPGIV  365 (479)
T ss_pred             HHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHH----------HHHhHHHHHHHHHHHHHHHhcCcccHH
Confidence            7776 68988888888888899999999999999999999875          566666666655554322  111 112


Q ss_pred             HHHHHHHHHHHhhh-ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734        306 VAIFFTIGMAFMGF-CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT  362 (817)
Q Consensus       306 ~~~~~~l~~~~~g~-~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~  362 (817)
                      ....+....++.+. ..+.......|..| ++|+++.|+.+..+++++.+++.+.+.+.
T Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~  424 (479)
T PRK10077        366 ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD  424 (479)
T ss_pred             HHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            22222222222222 23455677787766 78999999999999999999988776544

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.78  E-value=8.8e-16  Score=173.06  Aligned_cols=444  Identities=16%  Similarity=0.112  Sum_probs=269.9

Q ss_pred             hhchhHHHHHHHHHHHHHHHHHH----hhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccch
Q psy11734        200 LYSLPVWSLIISEVGHDYGLYLI----STDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRT  275 (817)
Q Consensus       200 ~~~~~~~~~~i~~~~~~~~~~~~----~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~  275 (817)
                      +++|+++..+....+.....|..    ...+|...++ .|-+ .+..++.....++..+..++.|+++|.+|||..    
T Consensus        37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~----  110 (599)
T PF06609_consen   37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYF----  110 (599)
T ss_pred             eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHH----
Confidence            45566665555444433333332    3334545555 4654 566777788899999999999999999999986    


Q ss_pred             hhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccc
Q psy11734        276 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVA  354 (817)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~  354 (817)
                            ...+.++..++.+...... +....+....+.+.+.+.... .....+|+.| |.|..+.++...........+
T Consensus       111 ------~i~g~~l~vvG~Iv~atA~-~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~  182 (599)
T PF06609_consen  111 ------FIIGSLLGVVGSIVCATAQ-NMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWIS  182 (599)
T ss_pred             ------HHHHHHHHHhHHHHhhcCC-cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence                  8888888889988887765 433444444444444444433 3444667666 789887776654433333344


Q ss_pred             ccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734        355 PLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG  434 (817)
Q Consensus       355 ~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~  434 (817)
                      +.+...+..                                             ..+||+.|++.++...++.++..+++
T Consensus       183 ~~ia~~~~~---------------------------------------------~~~WRw~~~~~~i~~~i~~vl~~~fY  217 (599)
T PF06609_consen  183 PLIAQLFAA---------------------------------------------HSGWRWIFYIFIIWSGIALVLIFFFY  217 (599)
T ss_pred             HHHHHHhcc---------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHh
Confidence            444332211                                             13799999999998888877666665


Q ss_pred             ccccccc--cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccc
Q psy11734        435 SGEVQYW--NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTL  512 (817)
Q Consensus       435 ~~~~~~~--~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (817)
                      +.++.++  .++.++ +..                          .+                                 
T Consensus       218 ~PP~~~~~~~~~~s~-~~~--------------------------l~---------------------------------  237 (599)
T PF06609_consen  218 FPPPRAQLHGRKLSK-REQ--------------------------LK---------------------------------  237 (599)
T ss_pred             CCCchhhhccccCcH-HHH--------------------------HH---------------------------------
Confidence            4433221  111111 100                          01                                 


Q ss_pred             cccccCChhhHHHHHHHHHHHHHHhhhhchhhc--cccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhc
Q psy11734        513 DAKFDWDERTQGVILSAFYYGYILTHIPGGILS--QKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGE  590 (817)
Q Consensus       513 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~--Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~  590 (817)
                        ++    +-+|.......+...+..+-+|--.  ++-..|   +++.++.+...+.....-+ .+            +.
T Consensus       238 --~l----D~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~---VIa~lviG~~~Lv~F~~wE-~~------------~~  295 (599)
T PF06609_consen  238 --EL----DWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAH---VIAPLVIGFVLLVAFVVWE-WF------------GA  295 (599)
T ss_pred             --Hh----hHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcc---chhhHHHHHHHHHHHHHhh-hh------------cc
Confidence              22    2244444444444444444433321  222222   2333333333222211110 00            00


Q ss_pred             ccCchh--HHhhcC-HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChh---HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        591 DLETPW--AAILSS-LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVA---ENGVLSALPFLIMWLVSMSSSALAD  664 (817)
Q Consensus       591 ~~~~~~--~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~---~~~~~~~~~~~~~~ig~~~~g~l~d  664 (817)
                       .++|+  .+++|+ |.+...++..++....++....+.|......++-|+.   +.++......++..+|..+.|.+..
T Consensus       296 -~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~  374 (599)
T PF06609_consen  296 -PKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFS  374 (599)
T ss_pred             -CCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHH
Confidence             12332  578887 4566666777788788899999999999888776653   5677778888999999999999999


Q ss_pred             hhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHH
Q psy11734        665 YLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMAL  742 (817)
Q Consensus       665 r~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~  742 (817)
                      |++|-|         +.++.+.+++.+++-.+... +++........++.+++.+....+..+..+-..| ++.|+++|+
T Consensus       375 ~ir~~K---------w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL  445 (599)
T PF06609_consen  375 KIRHIK---------WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGL  445 (599)
T ss_pred             Hccchh---------HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHH
Confidence            887643         34455665655544444433 3344444555556666666555555555555666 789999999


Q ss_pred             HHHHHHHHHhHHHHHHHHhhcCC----------------c----------------------------------------
Q psy11734        743 SNGLGCVSGMVAPLTVGFLTQNK----------------T----------------------------------------  766 (817)
Q Consensus       743 ~~~~~~~g~~i~p~~~g~~~~~~----------------g----------------------------------------  766 (817)
                      ...++.+|+.++..+...+..+.                |                                        
T Consensus       446 ~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~  525 (599)
T PF06609_consen  446 TGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQ  525 (599)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHH
Confidence            99999999999998886655421                0                                        


Q ss_pred             ---cccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734        767 ---LLEWRVVFWIMFLTLFISNVFFVLFGSG  794 (817)
Q Consensus       767 ---~~~~~~~~~~~~~~~~i~~~~~~~~~~~  794 (817)
                         ..+|+.+|+....+..++.+..++.+..
T Consensus       526 ~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~  556 (599)
T PF06609_consen  526 EAYAHAYRYVYYSSIAFGVVAIIAALFLGDI  556 (599)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence               0247888998888888888888887543

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.78  E-value=1.7e-18  Score=193.37  Aligned_cols=277  Identities=12%  Similarity=0.038  Sum_probs=191.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|+|.+...+...+++.|++|+|||++++++...+..+|.++|+++++.+.+ ..|||+.|++..++.++..... 
T Consensus       118 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~-  195 (399)
T PRK05122        118 GRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH-WGGLAGLGLLIMLLALLGLLLA-  195 (399)
T ss_pred             HHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHH-
Confidence            38899999999999999999999999999999999999999999999999999999 8999999988765544332221 


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                         ++.|++++. + ++                                                               
T Consensus       196 ---~~~~~~~~~-~-~~---------------------------------------------------------------  207 (399)
T PRK05122        196 ---RPRPAVPPV-K-GE---------------------------------------------------------------  207 (399)
T ss_pred             ---hcCCCCCCC-C-cc---------------------------------------------------------------
Confidence               222221110 0 00                                                               


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                      +.++++.+|+  ++.......+....+.....+.|.|+++ +|.  .+
T Consensus       208 --------------------------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~  250 (399)
T PRK05122        208 --------------------------------RLPFRRVLGR--VWPYGMGLALASIGFGTIATFITLYYAA-RGW--DG  250 (399)
T ss_pred             --------------------------------chhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--cc
Confidence                                            0011122221  1111222233344556667788888876 465  35


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      .+.......++..+++++.|++.||+++|+.          ...+..+..++...+...+ +.+...+...+.+++.+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~  319 (399)
T PRK05122        251 AALALTLFGVAFVGARLLFGNLINRLGGLRV----------AIVSLLVEILGLLLLWLAP-SPWMALIGAALTGFGFSLV  319 (399)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhHHHH
Confidence            5666777888999999999999999998774          5555555555555554443 4444444444444444444


Q ss_pred             cccccccccc-cCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734        321 YASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  399 (817)
Q Consensus       321 ~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (817)
                      .+.......+ .+++++|+++|+.+....+|..+++.+.|.+.|..                                  
T Consensus       320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------------------------------  365 (399)
T PRK05122        320 FPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF----------------------------------  365 (399)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------------------------------
Confidence            4444333444 55589999999999999999999999999887764                                  


Q ss_pred             ccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734        400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY  440 (817)
Q Consensus       400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~  440 (817)
                                 +|+..|++.+++.+++.++..++.++++++
T Consensus       366 -----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (399)
T PRK05122        366 -----------GYPSIFLAAALAALLGLALTWLLYRRAPRA  395 (399)
T ss_pred             -----------CHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence                       599999999988888887776665554433

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.77  E-value=5.3e-17  Score=169.44  Aligned_cols=287  Identities=17%  Similarity=0.165  Sum_probs=228.3

Q ss_pred             HHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHH
Q psy11734        451 VLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAF  530 (817)
Q Consensus       451 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~  530 (817)
                      ...+.++..+++-.+......+.+|.+.+                                   .||++..|.+++...|
T Consensus        13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~-----------------------------------~f~ls~~~a~liqfaf   57 (422)
T COG0738          13 LAFVLLTSLFFLWGFITCLNDILIPHLKE-----------------------------------VFDLTYFEASLIQFAF   57 (422)
T ss_pred             eHHHHHHHHHHHHHHHhhcchhhHHHHHH-----------------------------------HhCccHHHHHHHHHHH
Confidence            34556666667777777777888877777                                   9999999999999999


Q ss_pred             HHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHh-hhcchHHHHHHHHHHhhhcc------------------
Q psy11734        531 YYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI-AHSGPVSMTVLRFLEGVGED------------------  591 (817)
Q Consensus       531 ~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a-~~~s~~~l~~~R~l~Gig~~------------------  591 (817)
                      +.+|.+++++.|++.+|+|+|+.++.++.+++++..+..=+ ...++..++.+-++.|.|.+                  
T Consensus        58 f~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~  137 (422)
T COG0738          58 FGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES  137 (422)
T ss_pred             HHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh
Confidence            99999999999999999999999999999999999998532 23378889999999999998                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       138 a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~  217 (422)
T COG0738         138 AAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA  217 (422)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc
Confidence                                                                                            


Q ss_pred             -----cCc--hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        592 -----LET--PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALAD  664 (817)
Q Consensus       592 -----~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d  664 (817)
                           ++.  ...+++|+|+++...+..+++........+|++.|+.+..|.+..+++...+.+..+.++|++++.++..
T Consensus       218 ~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~  297 (422)
T COG0738         218 APSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMS  297 (422)
T ss_pred             cccccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 111  3567899999999999999999999999999999999988999999999999999999999999999999


Q ss_pred             hhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHH
Q psy11734        665 YLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSN  744 (817)
Q Consensus       665 r~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~  744 (817)
                      |+...+.+          ....++..+.++...+.+ + ...+......+++++..+|..++...+..|++...+.++ -
T Consensus       298 ~~~~~k~L----------af~a~~~ill~~~~~l~~-g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~-l  364 (422)
T COG0738         298 RIKPEKYL----------AFYALIAILLLLAVALIG-G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGL-L  364 (422)
T ss_pred             HhCHHHHH----------HHHHHHHHHHHHHHHHhc-C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccccccee-e
Confidence            99876643          233333334444444443 3 555666667788888899999988888888555555554 4


Q ss_pred             HHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHH
Q psy11734        745 GLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFF  788 (817)
Q Consensus       745 ~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~  788 (817)
                      .+...|+++.|.+.|++.|..+   -...+......+.+..+.+
T Consensus       365 ~maivGGAiiP~l~G~i~d~~g---~~~~~~~~pllc~lyV~~~  405 (422)
T COG0738         365 VMAIVGGAIIPPLQGVIADMFG---IQLTFLIVPLLCYLYVLFF  405 (422)
T ss_pred             eeheecchHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHH
Confidence            5678899999999999999986   3444444444555444333

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.77  E-value=1.5e-18  Score=193.21  Aligned_cols=255  Identities=13%  Similarity=0.076  Sum_probs=179.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...|...+++.|++|+|+|++++|+......+|..+||.+++++.+  .|||+.|++.+++.++..++..
T Consensus       105 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~--~g~~~~f~~~~~~~~~~~i~~~  182 (400)
T PRK11646        105 SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ--YDFRLVCATGAVLFVLAAAFNA  182 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHH
Confidence            37889999998899999999999999999999999999999999999999999886  6999999998877776655555


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      ++.|++++++      +++       +                                                     
T Consensus       183 ~~~~~~~~~~------~~~-------~-----------------------------------------------------  196 (400)
T PRK11646        183 WLLPAYKLST------VRT-------P-----------------------------------------------------  196 (400)
T ss_pred             HhCCcccccc------cch-------h-----------------------------------------------------
Confidence            5444321100      000       0                                                     


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                     .+.+++++++||.++...+..+...........++|.|+++. +.++.+
T Consensus       197 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~  244 (400)
T PRK11646        197 -------------------------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI-AGSPSA  244 (400)
T ss_pred             -------------------------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh-cCCchH
Confidence                                           012356778888887666555554444444567899999885 447788


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADF-FIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~  319 (817)
                      .+.+.....++...+....+++.|| .+.++.          ...+..+..++...+...+ +.........+.+.+.+.
T Consensus       245 ~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~----------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~g~~~  313 (400)
T PRK11646        245 VKWMYAIEACLSLTLLYPIARWSEKRFRLEHR----------LMAGLLIMSLSMFPIGMVS-NLQQLFTLICLFYIGSII  313 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH----------HHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHH
Confidence            8888777777666665555666655 433332          4455555555555554443 333333333334444445


Q ss_pred             ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      ..+.......+..| +++|++.|+.+....+|+++||.+.|.+.|+.+
T Consensus       314 ~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~  361 (400)
T PRK11646        314 AEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK  361 (400)
T ss_pred             HHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence            55555666666555 899999999999999999999999999998864

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.77  E-value=2.1e-18  Score=190.03  Aligned_cols=257  Identities=15%  Similarity=0.163  Sum_probs=179.5

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc---------cccCcchhH-HHHhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS---------FTASWANVF-YIFGA   70 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~---------~~~gWr~~f-~i~~~   70 (817)
                      .|+++|++.+ .++...++++|++|+|||++++++......+|..+++.+++.+.+         ...+||+.| ++.++
T Consensus        97 ~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~  175 (366)
T TIGR00886        97 LRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAG  175 (366)
T ss_pred             HHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHH
Confidence            3789999866 566788999999999999999999998888888877777766654         024899999 44466


Q ss_pred             hHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCC
Q psy11734         71 IAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGG  150 (817)
Q Consensus        71 ~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (817)
                      +..+..++.+.+.+|+|++++.   +++.+.    ..    .+.    ..                              
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~----~~~----~~------------------------------  210 (366)
T TIGR00886       176 ILLLPALLIFFVGADTPPGKPA---TGKLSF----KG----ARW----SV------------------------------  210 (366)
T ss_pred             HHHHHHHHHHHhcccCCccccc---chhccc----cc----ccc----cc------------------------------
Confidence            6666656666666665533211   000000    00    000    00                              


Q ss_pred             ccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734        151 KHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYM  230 (817)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l  230 (817)
                                                            +++...+.++++++|+++...+..++.....+.+..+.|.|+
T Consensus       211 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (366)
T TIGR00886       211 --------------------------------------GTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFF  252 (366)
T ss_pred             --------------------------------------cchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                  000111356788999999888888888888888999999999


Q ss_pred             HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc--cCC-ChhHHH
Q psy11734        231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY--VGC-NTSMVA  307 (817)
Q Consensus       231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~  307 (817)
                      ++.+|+++.+++.+.....+.+.++++++|+++||+++|+.          ...+......+...+..  ..+ +.....
T Consensus       253 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (366)
T TIGR00886       253 KDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARK----------LLMSFLGVAMGAFLVVLGLVSPLSLAVFI  322 (366)
T ss_pred             HHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchh----------HHHHHHHHHHHHHHHHhcCCCcchHHHHH
Confidence            99899999999998999999999999999999999999874          33333333333333322  221 333334


Q ss_pred             HHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcc
Q psy11734        308 IFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSG  351 (817)
Q Consensus       308 ~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~  351 (817)
                      ........+.+...+.......+..|+++|+++|+.+..+++|+
T Consensus       323 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  366 (366)
T TIGR00886       323 VLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLGG  366 (366)
T ss_pred             HHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCCC
Confidence            44444555666666666777778889999999999999998774

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.77  E-value=1.2e-16  Score=202.69  Aligned_cols=391  Identities=14%  Similarity=0.065  Sum_probs=250.9

Q ss_pred             HHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc--ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccch
Q psy11734        198 AILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA--ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRT  275 (817)
Q Consensus       198 ~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~--~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~  275 (817)
                      ..++++.+...++..++...........+..++...++.+..  ..+++.....++..++++++|+++||+|||+.    
T Consensus         4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~----   79 (1146)
T PRK08633          4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRV----   79 (1146)
T ss_pred             chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHH----
Confidence            467888888888777776666655555555555544555433  35777778889999999999999999999985    


Q ss_pred             hhHHHHHHHHhHHHHHHHHhhhc--cCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccc
Q psy11734        276 NVRKVFATLGAVLPGVGALAASY--VGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGM  352 (817)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~  352 (817)
                            +..+.++..+..++...  ..++.+...+..++.+.+.+...+....++.+..| ++|+.++|+.+....+|.+
T Consensus        80 ------l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~  153 (1146)
T PRK08633         80 ------IRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAIL  153 (1146)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHH
Confidence                  44444433332222221  12244555555555666666677777777778665 7899999999999999999


Q ss_pred             ccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHH-HHHHHhhhhhe
Q psy11734        353 VAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMF-LALVISNVFFV  431 (817)
Q Consensus       353 ~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~-~~~~~~~~~~~  431 (817)
                      +|+.+++.+.+..+.-.                                   .+. ..++.+.+.+.+ ...+++.++.+
T Consensus       154 lg~~l~~~l~~~~~~~~-----------------------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~  197 (1146)
T PRK08633        154 AGTALFSFLFESVNGNT-----------------------------------PSE-ILGRIAPAGLVLLAVAVLGLIFAY  197 (1146)
T ss_pred             HHHHHHHHHHHhhcccc-----------------------------------ccc-cccchHHHHHHHHHHHHHHHHHHh
Confidence            99999998876521000                                   000 012333333222 22233333333


Q ss_pred             eecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccc
Q psy11734        432 LFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTT  511 (817)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (817)
                      .++ +.++....+.                                 +                           +    
T Consensus       198 ~~~-~~~~~~~~~~---------------------------------~---------------------------~----  212 (1146)
T PRK08633        198 RLP-KVPAAAPEVF---------------------------------D---------------------------K----  212 (1146)
T ss_pred             cCc-CCCCCCcccc---------------------------------c---------------------------c----
Confidence            332 2111000000                                 0                           0    


Q ss_pred             ccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734        512 LDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED  591 (817)
Q Consensus       512 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~  591 (817)
                        .+.. ...+                                               .                     
T Consensus       213 --~~~~-~~~~-----------------------------------------------~---------------------  221 (1146)
T PRK08633        213 --KKYL-FPKL-----------------------------------------------L---------------------  221 (1146)
T ss_pred             --cccc-cHHH-----------------------------------------------H---------------------
Confidence              0000 0000                                               0                     


Q ss_pred             cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChh-HHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy11734        592 LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVA-ENGVLSALPFLIMWLVSMSSSALADYLIVRD  670 (817)
Q Consensus       592 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~-~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~  670 (817)
                       ...++.++++|.++...+..++.....+.+..++|.|+++.+|.+.. +.+++.+...++.+++.++.|+++||+++++
T Consensus       222 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~  300 (1146)
T PRK08633        222 -WRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG  300 (1146)
T ss_pred             -HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc
Confidence             01234567788888887777777777788888999999999999998 9999999999999999999999999999876


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHH
Q psy11734        671 ILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCV  749 (817)
Q Consensus       671 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~  749 (817)
                      .+          .++.++.+++++++.+.. +.+..++..++.+++.++..+...+...+..| +.||+++|+.+.+.++
T Consensus       301 ~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~l  369 (1146)
T PRK08633        301 LV----------PLGALGLALSLFLLPTAP-SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNV  369 (1146)
T ss_pred             ch----------hHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHH
Confidence            54          245555555555555543 44555555555666666666666777777777 7899999999999999


Q ss_pred             HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHH
Q psy11734        750 SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFIS  784 (817)
Q Consensus       750 g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~  784 (817)
                      ++.+++.+.+.+... + .++...+++.+.+.++.
T Consensus       370 g~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~  402 (1146)
T PRK08633        370 GMLLFLALTTLFSGL-G-LSPAGLFYLIALVTLIG  402 (1146)
T ss_pred             HHHHHHHHHHHHHHh-c-cCHHHHHHHHHHHHHHH
Confidence            998888887766542 2 12445555555544443

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.77  E-value=3.2e-17  Score=183.12  Aligned_cols=347  Identities=16%  Similarity=0.107  Sum_probs=219.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHH
Q psy11734        203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFA  282 (817)
Q Consensus       203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~  282 (817)
                      +.+....+..++.....+......|.+. +.+|.|..+.++..+...++..+++++.|+++||+|||+.          +
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~----------~   80 (405)
T TIGR00891        12 NAFSAAWLGWLLDAFDFFLVALVLAEVA-GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLP----------M   80 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------H
Confidence            3455666777777777777777777655 4589999999999999999999999999999999999986          6


Q ss_pred             HHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccccccee
Q psy11734        283 TLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL  361 (817)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l  361 (817)
                      ..+..+.+++.....+.+ +.........+.+.+.+...+.......|..| ++|++++++.+....+|..+++.+.+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l  159 (405)
T TIGR00891        81 VTSIVLFSAGTLACGFAP-GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV  159 (405)
T ss_pred             HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666666666666655544 55555555555555555666666666666555 8999999999999999999999988877


Q ss_pred             cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc-
Q psy11734        362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY-  440 (817)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~-  440 (817)
                      .+..+                                           .+|+..|++.++..++..+.....+++++.+ 
T Consensus       160 ~~~~~-------------------------------------------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  196 (405)
T TIGR00891       160 VPVWG-------------------------------------------DGWRALFFISILPIIFALWLRKNIPEAEDWKE  196 (405)
T ss_pred             HHhcC-------------------------------------------ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHH
Confidence            65431                                           1599999887766666555444443321100 


Q ss_pred             --cc-CCC----------C------------------chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCC
Q psy11734        441 --WN-ESI----------L------------------PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFV  489 (817)
Q Consensus       441 --~~-~~~----------~------------------~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (817)
                        .+ +..          .                  +.+|........................|...           
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  265 (405)
T TIGR00891       197 KHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYL-----------  265 (405)
T ss_pred             HhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHH-----------
Confidence              00 000          0                  01111111111222111111122222223222           


Q ss_pred             CCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHH-
Q psy11734        490 NTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLT-  568 (817)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~-  568 (817)
                                             .+++|+++.+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.++..+.. 
T Consensus       266 -----------------------~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~  322 (405)
T TIGR00891       266 -----------------------KADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVF  322 (405)
T ss_pred             -----------------------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHH
Confidence                                   22789999999999999999999999999999999999999888776553332221 


Q ss_pred             HHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCC--hhHHHHHHH
Q psy11734        569 PLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLS--VAENGVLSA  646 (817)
Q Consensus       569 ~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s--~~~~~~~~~  646 (817)
                      ...+  +.+                             ...+..++......+.....+.+..+...-+  ....+....
T Consensus       323 ~~~~--~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  371 (405)
T TIGR00891       323 AIGA--NVA-----------------------------VLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQ  371 (405)
T ss_pred             HhCC--chH-----------------------------HHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHH
Confidence            1111  111                             1112112222222222233444555432211  122444556


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcc
Q psy11734        647 LPFLIMWLVSMSSSALADYLIVR  669 (817)
Q Consensus       647 ~~~~~~~ig~~~~g~l~dr~g~~  669 (817)
                      ...+++.++.++.|.+.|+.|..
T Consensus       372 ~~~~g~~~g~~~~g~l~~~~g~~  394 (405)
T TIGR00891       372 LGNLGGALAPIIGALLAQRLDEY  394 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccc
Confidence            67788999999999999999854

>TIGR00895 2A0115 benzoate transport

Probab=99.77  E-value=2.6e-18  Score=191.23  Aligned_cols=282  Identities=16%  Similarity=0.211  Sum_probs=189.2

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++++.+ ..|||+.|++.+.+.++..++.+.
T Consensus       112 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~  190 (398)
T TIGR00895       112 RFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP-VFGWRSLFYVGGIAPLLLLLLLMR  190 (398)
T ss_pred             HHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh-cccceeehhhhhhHHHHHHHHHHH
Confidence            7889999999999999999999999999999999999999999999999999999 899999999987777777666666


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      ++|++|+.....++++..+..++.......++++...++                                         
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------  229 (398)
T TIGR00895       191 FLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQ-----------------------------------------  229 (398)
T ss_pred             hCCCCChHHHhcCHHHHHHHHHHHHHhcccccccccccc-----------------------------------------
Confidence            677654321111111111111111000000000000000                                         


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhh---chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILY---SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSV  238 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~  238 (817)
                                              +..++..+...+.+++   ++..+...+..++.....+....|.| ++.+.+|+++
T Consensus       230 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~  284 (398)
T TIGR00895       230 ------------------------KATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSL  284 (398)
T ss_pred             ------------------------ccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCH
Confidence                                    0000001111222333   23445555566666777788888899 4445589999


Q ss_pred             cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhh
Q psy11734        239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMG  318 (817)
Q Consensus       239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g  318 (817)
                      .+++.......+++.+++++.|+++||+++|+           ......+..+....+....++.........+.+.+.+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  353 (398)
T TIGR00895       285 SLAATGGALFNFGGVIGSIIFGWLADRLGPRV-----------TALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVN  353 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH-----------HHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999874           2233333333222222222244444444455555555


Q ss_pred             hccccccccccccCC-CchhHHHHHHHhhhhhccccccccccee
Q psy11734        319 FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL  361 (817)
Q Consensus       319 ~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l  361 (817)
                      ...+.......+..| ++|+++.|+.+.+..+|++++|.+.|.+
T Consensus       354 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l  397 (398)
T TIGR00895       354 GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL  397 (398)
T ss_pred             HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence            666666777777666 7999999999999999999999998865

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.77  E-value=8.3e-19  Score=204.97  Aligned_cols=335  Identities=14%  Similarity=0.123  Sum_probs=205.2

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------------cccCcchhHHHH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS------------FTASWANVFYIF   68 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------------~~~gWr~~f~i~   68 (817)
                      +|+++|+|.|+..|...+++.|++|+++|+++++++.+...+|.++++.++..+.+            ...+||+.|++.
T Consensus       261 ~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~  340 (742)
T TIGR01299       261 CRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVC  340 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999988876654            024689999987


Q ss_pred             hhhHHHHHhhhhheeccCCCCCCCCC----HHHHhHhhhhccccccccc----cccccCccccchhhhhhhhchhhcccc
Q psy11734         69 GAIAVLWFAFWCILCFNDPKSHPYIS----EKERKYLLDSIGAAERRKD----AKFDWDERTQGVILSSFYYGYTLTHIP  140 (817)
Q Consensus        69 ~~~~~i~~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (817)
                      +++.++. ++..+++||.|   ++..    .++......++.....+..    ..+..++.              ... .
T Consensus       341 ~lp~ll~-ll~~~~lPESP---rwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~--------------~~~-~  401 (742)
T TIGR01299       341 AFPCVFA-IGALTFMPESP---RFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHI--------------KTI-H  401 (742)
T ss_pred             HHHHHHH-HHHHHHcCCCH---HHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHH--------------HHh-h
Confidence            7665554 44455565554   3321    1111111111111000000    00000000              000 0


Q ss_pred             ccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchh-hhHHhhhccCcccCchHHHHhhch---hHHHHHHHHHHHH
Q psy11734        141 GGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSM-TVLRFLEGVGEDLKTPWAAILYSL---PVWSLIISEVGHD  216 (817)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~i~~~~~~  216 (817)
                      .   .|..                   .......+...- ...+ ..........+++++|+.|   ..+.+.+..++..
T Consensus       402 ~---~~~~-------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~  458 (742)
T TIGR01299       402 Q---EDEL-------------------IEIESDTGTWYQRCFVR-ALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLS  458 (742)
T ss_pred             h---hhhh-------------------hcccccccchhhcchhh-hhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence            0   0000                   000000000000 0000 0000000011344555543   3577888888899


Q ss_pred             HHHHHHhhchhhHHHHh----h-----------------CCccc------------------------------------
Q psy11734        217 YGLYLISTDLPKYMSEV----I-----------------GLSVA------------------------------------  239 (817)
Q Consensus       217 ~~~~~~~~~~p~~l~~~----~-----------------g~s~~------------------------------------  239 (817)
                      +++|++..|+|.++.+.    +                 +++.+                                    
T Consensus       459 ~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  538 (742)
T TIGR01299       459 FGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDD  538 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceee
Confidence            99999999999886541    0                 00000                                    


Q ss_pred             ---------------------------------------------------------ccchhhhhhHHHHHHHHhhhHHH
Q psy11734        240 ---------------------------------------------------------ENGVLSALPFLIMWLVSMSSSAL  262 (817)
Q Consensus       240 ---------------------------------------------------------~ag~~~~~~~i~~~ig~~~~G~l  262 (817)
                                                                               ..........++.+++.+++|++
T Consensus       539 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L  618 (742)
T TIGR01299       539 VTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALL  618 (742)
T ss_pred             ccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                                     01223445668889999999999


Q ss_pred             HHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHH
Q psy11734        263 ADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMA  341 (817)
Q Consensus       263 ~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g  341 (817)
                      +||+|||+.          +..+.++.+++.+++.+.. +....++..++.+++.+...+...++..|+.| ++|++++|
T Consensus       619 ~Dr~GRr~~----------l~~~~~lsai~~ll~~~~~-s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~G  687 (742)
T TIGR01299       619 MDKIGRLRM----------LAGSMVLSCISCFFLSFGN-SESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFG  687 (742)
T ss_pred             HHHhCCHHH----------HHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            999999986          6777777777766666554 33333333444444455555666778888877 78999999


Q ss_pred             HHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHH
Q psy11734        342 LSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFL  421 (817)
Q Consensus       342 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~  421 (817)
                      +.+....+|++++|.+.+.+.+.                                              .....|++.++
T Consensus       688 i~~~~~rlGaiigp~i~g~L~~~----------------------------------------------~~~~pf~i~a~  721 (742)
T TIGR01299       688 FLNALCKAAAVLGILIFGSFVGI----------------------------------------------TKAAPILFASA  721 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh----------------------------------------------hhHHHHHHHHH
Confidence            99999999999999998877653                                              24567777877


Q ss_pred             HHHHhhhhheeec
Q psy11734        422 ALVISNVFFVLFG  434 (817)
Q Consensus       422 ~~~~~~~~~~~~~  434 (817)
                      +.++++++.++++
T Consensus       722 ~lll~~ll~~~LP  734 (742)
T TIGR01299       722 ALACGGLLALKLP  734 (742)
T ss_pred             HHHHHHHHHHhCC
Confidence            7777777766664

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>KOG2533|consensus

Probab=99.76  E-value=2.6e-17  Score=183.41  Aligned_cols=273  Identities=19%  Similarity=0.144  Sum_probs=201.6

Q ss_pred             CCCCchhHHHHHHHHHHHHHHHhhhhhccEEE-EeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734        443 ESILPARYVLGIMGCMGVTLALMMRSCLATAI-TEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER  521 (817)
Q Consensus       443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  521 (817)
                      +..+|.+.+++..++..++..+.|+..++.+. -.+.+                                   |.|+..+
T Consensus        37 ~l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~e-----------------------------------dl~~~~~   81 (495)
T KOG2533|consen   37 KLLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKE-----------------------------------DLKLVGN   81 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCcc-----------------------------------ccchhhh
Confidence            34466677778888888899999998776532 22334                                   9999999


Q ss_pred             hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc----------
Q psy11734        522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED----------  591 (817)
Q Consensus       522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~----------  591 (817)
                      +.+.+.++|.++|+++++++|.+.||++..+.+....+.+++..+++...+  |++.+++.|++.|+.++          
T Consensus        82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~--s~~~~ialr~llGl~es~~wP~~~~~l  159 (495)
T KOG2533|consen   82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH--SFPGLIALRFLLGLFESGGWPGVVAIL  159 (495)
T ss_pred             hhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHhcccchHHHHHH
Confidence            999999999999999999999999999999999999999999999999988  99999999999999999          


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       160 g~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~  239 (495)
T KOG2533|consen  160 GNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTD  239 (495)
T ss_pred             HhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccch
Confidence                                                                                            


Q ss_pred             ----------------------cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH
Q psy11734        592 ----------------------LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF  649 (817)
Q Consensus       592 ----------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~  649 (817)
                                            ++..+++.+++|++|...+..++.....+++.+|+|.|+++..|+|..++..+..+..
T Consensus       240 ~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~  319 (495)
T KOG2533|consen  240 EEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYD  319 (495)
T ss_pred             HHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHH
Confidence                                  1123467889999999999999999999999999999999966799999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhcc
Q psy11734        650 LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPI  729 (817)
Q Consensus       650 ~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (817)
                      ++++++.++.|+++||.+.-     ...|..+....++...++...+.... ....................+......+
T Consensus       320 ~~g~v~~i~ag~lsdr~~~~-----~~~~~~~~~~~~~~~~~g~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~s  393 (495)
T KOG2533|consen  320 VGGIVGLILAGYLSDRLKTI-----FARRLLFIVFLCLYAIIGAISLLAAA-VLPGAYGAFLIGPYGLIATAIIALSWTS  393 (495)
T ss_pred             hhhHHHHHHHHHHHHHHhhh-----HHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHhHHHHhcchhhHHHHHHHHhhcc
Confidence            99999999999999996410     01122233344444444544444432 2333333333333333333333333333


Q ss_pred             c-cCCC-chHHHHHHHHHHHHHHHhHHHHHH
Q psy11734        730 D-LSPN-FSGTIMALSNGLGCVSGMVAPLTV  758 (817)
Q Consensus       730 ~-~~~~-~~g~~~g~~~~~~~~g~~i~p~~~  758 (817)
                      + ..++ .+-+..+......+.++.++|.+.
T Consensus       394 ~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~  424 (495)
T KOG2533|consen  394 ANLAGNTKALTTVSAIIDGTGSAGAISGQLF  424 (495)
T ss_pred             ccccchHHhHHHHhhhhcchhHHHHhhhhhc
Confidence            3 3443 344445555555555666555553

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.76  E-value=2.6e-18  Score=192.09  Aligned_cols=264  Identities=9%  Similarity=-0.019  Sum_probs=183.2

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|++||++.+...+....++.|++|++||+++++++.....+|..+||.+++.+.+ ..|||+.|++.+++.++..+..+
T Consensus       110 ~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-~~gw~~~f~~~~~~~~i~~~~~~  188 (413)
T PRK15403        110 ARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-FVHWKVLFAIIAVMGLIAFVGLL  188 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHH
Confidence            48999999987777888899999999999999999999999999999999999998 88999999999988887766655


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +.+||++++++. + .+..                                                             
T Consensus       189 ~~lp~~~~~~~~-~-~~~~-------------------------------------------------------------  205 (413)
T PRK15403        189 LAMPETVKRGAV-P-FSAK-------------------------------------------------------------  205 (413)
T ss_pred             HhCCCCccccCC-C-CChH-------------------------------------------------------------
Confidence            556654321100 0 0000                                                             


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                    ....++++++|||.++...+...+.....+.+..+.|.++++.+|+++.+
T Consensus       206 ------------------------------~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~  255 (413)
T PRK15403        206 ------------------------------SVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQ  255 (413)
T ss_pred             ------------------------------HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHH
Confidence                                          00124678899999999999888888888999899999999988999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      .++...+...+..+++.+.+++.+|..+++..   .....+...+..+...+..   ...+++........+.+.+.+..
T Consensus       256 ~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~---~~~~~~~~ig~~l~~~~~~---~~~~~~~~~~~~~~l~~~G~~~~  329 (413)
T PRK15403        256 FAWTQVPVFGAVIVANAIVARFVKDPTEPRFI---WRAVPIQLVGLALLIVGNL---LWPHVWLWSVLGTSLYAFGIGLI  329 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCchhHH---HHHHHHHHHHHHHHHHHHH---HccccHHHHHHHHHHHHHHHHHH
Confidence            99999888888888888888876544333320   0000111122221111111   12223322333444444444455


Q ss_pred             cccccccccccCCCchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734        321 YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  364 (817)
Q Consensus       321 ~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~  364 (817)
                      .+........-.+..+|++.++.+..+..+...++...+.+.++
T Consensus       330 ~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~  373 (413)
T PRK15403        330 FPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN  373 (413)
T ss_pred             hHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            44444222222233579999999999998888888888876654

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.76  E-value=2.8e-18  Score=192.09  Aligned_cols=282  Identities=16%  Similarity=0.174  Sum_probs=195.7

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|++.+ ..|...+.+.|++|+|||+++.++...+..+|..++|++++.+.+ ..|||+.|++.+++.++..+..++
T Consensus       114 ~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~  191 (408)
T PRK09874        114 RALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD-SYGLRPVFFITASVLFLCFLVTLF  191 (408)
T ss_pred             HHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHH
Confidence            778888755 678888899999999999999999999999999999999999999 899999999998887777766666


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      ++||++++.+   +++..+                                                             
T Consensus       192 ~~~~~~~~~~---~~~~~~-------------------------------------------------------------  207 (408)
T PRK09874        192 CIRENFQPVS---KKEMLH-------------------------------------------------------------  207 (408)
T ss_pred             HhccCccccc---chhhhH-------------------------------------------------------------
Confidence            6665432111   000000                                                             


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHH-HHHHHHHHHHHHHhhchhhHHHHhhCCccc-
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLI-ISEVGHDYGLYLISTDLPKYMSEVIGLSVA-  239 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~-  239 (817)
                                                     ..+..+.+++|+++... ....+..........+.|.|.++..+.... 
T Consensus       208 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (408)
T PRK09874        208 -------------------------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNI  256 (408)
T ss_pred             -------------------------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence                                           00122345566654432 223333344445556778888774332221 


Q ss_pred             --ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHh
Q psy11734        240 --ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFM  317 (817)
Q Consensus       240 --~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  317 (817)
                        ..+.+.....++..++.+..|+++||+++|+.          ...+..+..+.+....... +.+...+...+.+.+.
T Consensus       257 ~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~  325 (408)
T PRK09874        257 AFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI----------LITALIFSVLLLIPMSFVQ-TPLQLGILRFLLGAAD  325 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhh
Confidence              24555566778888999999999999999885          5555555555554444443 3444444444445555


Q ss_pred             hhcccccccccccc-CCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734        318 GFCYASIRVNPIDL-SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA  396 (817)
Q Consensus       318 g~~~~~~~~~~~~~-~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (817)
                      +...+.......+. +++++|+.+++.+..+.+|.++||.+.|.+.|..                               
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-------------------------------  374 (408)
T PRK09874        326 GALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-------------------------------  374 (408)
T ss_pred             HhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-------------------------------
Confidence            55555555455554 4578999999999999999999999999888765                               


Q ss_pred             cccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734        397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG  436 (817)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~  436 (817)
                                    +|+..|++.+++.+++.++..+..|+
T Consensus       375 --------------g~~~~f~~~~~~~l~~~~~~~~~~~~  400 (408)
T PRK09874        375 --------------GFRAVFLVTAGVVLFNAVYSWNSLRR  400 (408)
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence                          58999999999888887766554433

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.76  E-value=3.8e-18  Score=189.14  Aligned_cols=255  Identities=11%  Similarity=0.026  Sum_probs=195.4

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |.++|.+.+...|...++..++  +|||+++.|......++|.+++|++++++.+ ..|||+.|++.....+ +.+..+.
T Consensus       101 ~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~-~~g~~~~f~~~~~~~~-~~~~~~~  176 (382)
T TIGR00902       101 IGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG-MFDEQNILAILTAGLA-FMLIGFL  176 (382)
T ss_pred             HHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH-HcChhHHHHHHHHHHH-HHHHHHH
Confidence            6778888888899988887654  5889999999999999999999999999999 9999999998765432 2223333


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                       .+++++.++. ++ +.        +     +                                                
T Consensus       177 -~~~~~~~~~~-~~-~~--------~-----~------------------------------------------------  192 (382)
T TIGR00902       177 -IKPTIPPKDA-IP-ED--------E-----S------------------------------------------------  192 (382)
T ss_pred             -cCCCCCCCcc-cc-cc--------c-----c------------------------------------------------
Confidence             3332111100 00 00        0     0                                                


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN  241 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a  241 (817)
                                                   +...+.++++|||+++...+..++..........+.|.|+++ +|.++.+.
T Consensus       193 -----------------------------~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~  242 (382)
T TIGR00902       193 -----------------------------QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASAT  242 (382)
T ss_pred             -----------------------------ccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHH
Confidence                                         011236789999999999999998888999999999999987 79999999


Q ss_pred             chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcc
Q psy11734        242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCY  321 (817)
Q Consensus       242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~  321 (817)
                      |.+.....++.+++.++.+++.||+++|+.          +..+.+...+......+.+ +.+.......+-+...+...
T Consensus       243 g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~----------l~~~~~~~~~~~~~~~~~~-~~~~~~~~q~l~g~~~~~~~  311 (382)
T TIGR00902       243 GLLWGIGVLAEIIIFAFSNKLFQNCSARDL----------LLISAIACVGRWAIIGAIE-AFPLIFLLQILHCGTFAVCH  311 (382)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHhhCCHHHH----------HHHHHHHHHHHHHHHHhHh-hHHHHHHHHHHHHHHHHHHH
Confidence            999888899999999999999999999885          6778887777777666544 55555555555666666666


Q ss_pred             ccccccccccCCCchhHHHHHHHh-hhhhcccccccccceecccc
Q psy11734        322 ASIRVNPIDLSPNFSGTIMALSNG-LGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       322 ~~~~~~~~~~~p~~~g~a~g~~~~-~~~lg~~~~~~i~g~l~~~~  365 (817)
                      +....+.++.++++++++.++.+. ...+|.+++|.+.|.+.|+.
T Consensus       312 ~~~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~  356 (382)
T TIGR00902       312 LAAMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL  356 (382)
T ss_pred             HHHHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            666666667755789999999875 45689999999999999885

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK12382 putative transporter; Provisional

Probab=99.76  E-value=6.4e-18  Score=188.15  Aligned_cols=272  Identities=13%  Similarity=0.062  Sum_probs=188.3

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...|...+++.|++|+|||++++++.+.+...|..++|++++++.+ ..|||+.+++..++.++...   
T Consensus       118 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~---  193 (392)
T PRK12382        118 GRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS-HFGFAALALTTMVLPLLAWA---  193 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh-ccChHHHHHHHHHHHHHHHH---
Confidence            38899999999999999999999999999999999999999999999999999999 89999988876544333221   


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                       +.++.|++++..  +++                                                              
T Consensus       194 -~~~~~~~~~~~~--~~~--------------------------------------------------------------  208 (392)
T PRK12382        194 -FNGTVRKVPAHA--GER--------------------------------------------------------------  208 (392)
T ss_pred             -HHHhccCCCCCc--ccC--------------------------------------------------------------
Confidence             222223221100  000                                                              


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                       .+.++.+|  .++...+...+..........+.|.|+++ .|++  +
T Consensus       209 ---------------------------------~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--~  250 (392)
T PRK12382        209 ---------------------------------PSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA--M  250 (392)
T ss_pred             ---------------------------------chHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc--h
Confidence                                             00111111  11111112223344555666788888877 4654  4


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      .+.......++..+++++.|++.||+++|+.          ...+..+..++...+...+ +.........+.+.+.+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~  319 (392)
T PRK12382        251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV----------AIVSLLVETVGLLLLWLAP-TAWVALAGAALTGAGCSLI  319 (392)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCee----------hHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHhH
Confidence            5666667788889999999999999999886          5556666566555554443 4444444444444444444


Q ss_pred             cccccccccc-cCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734        321 YASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  399 (817)
Q Consensus       321 ~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (817)
                      .+.......+ .+|++||++.|+.++..++|++++|.+.|.+.|+.                                  
T Consensus       320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~----------------------------------  365 (392)
T PRK12382        320 FPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF----------------------------------  365 (392)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------------------
Confidence            4544444444 55689999999999999999999999999998875                                  


Q ss_pred             ccccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734        400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS  435 (817)
Q Consensus       400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~  435 (817)
                                 +|+..|.+.+++.+++.++.+++.|
T Consensus       366 -----------g~~~~~~~~~~~~~~~~~~~~~~~~  390 (392)
T PRK12382        366 -----------GYPSVFLAGAISAVLGIIVTILSFR  390 (392)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHhhcc
Confidence                       5999999999988888877665543

>PRK11043 putative transporter; Provisional

Probab=99.75  E-value=2.4e-17  Score=184.13  Aligned_cols=256  Identities=16%  Similarity=0.134  Sum_probs=187.3

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|++.+...+...+++.|++|+++|+++.+.......+|..++|.+++++.+ ..|||+.|++.+.+.++..+..++
T Consensus       101 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~  179 (401)
T PRK11043        101 RFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN-HFGWQAIFATLFAITLLLILPTLR  179 (401)
T ss_pred             HHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHHHHHH
Confidence            7899999988888888999999999999999999999999999999999999999 899999999998877776665554


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      + ++++++++    +++                                                               
T Consensus       180 ~-~~~~~~~~----~~~---------------------------------------------------------------  191 (401)
T PRK11043        180 L-KPSKKARK----QSQ---------------------------------------------------------------  191 (401)
T ss_pred             c-CCCCCccc----cch---------------------------------------------------------------
Confidence            3 33221110    000                                                               


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN  241 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a  241 (817)
                                                    .+.++++++|+|+++...+...+....++....+.|.++++ +|+++.+.
T Consensus       192 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~  240 (401)
T PRK11043        192 ------------------------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADI  240 (401)
T ss_pred             ------------------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHH
Confidence                                          01236678888888877777677777778888899999876 79999999


Q ss_pred             chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc-cCCChhHHHHHHHHHHHHhhhc
Q psy11734        242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY-VGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      |+...+..++..++++..+++.||+++|+..      + .......+..+.+..... ..++.........+.+.+.+..
T Consensus       241 g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (401)
T PRK11043        241 GLSYVPQTIAFLVGGYGCRAALQKWGGEQLL------P-WLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAI  313 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH------H-HHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHH
Confidence            9988888889999999999999999887641      1 111222222222222222 1223333333344444555555


Q ss_pred             cccccccccccCCCchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734        321 YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  364 (817)
Q Consensus       321 ~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~  364 (817)
                      .+.......+..|+++|++.|+.++.+..++..++.+.|.+.|.
T Consensus       314 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~  357 (401)
T PRK11043        314 YPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIST  357 (401)
T ss_pred             HHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            56555555566688999999999999999999999998888764

>PRK10133 L-fucose transporter; Provisional

Probab=99.74  E-value=8e-18  Score=189.27  Aligned_cols=259  Identities=12%  Similarity=0.090  Sum_probs=185.8

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-c----------------c-----
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-F----------------T-----   58 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-~----------------~-----   58 (817)
                      .|+++|+|.|...+....++.|+.|+++|.+.+++.+....+|..+++.+++.+.. .                .     
T Consensus       123 ~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~  202 (438)
T PRK10133        123 GLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKH  202 (438)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHH
Confidence            38999999999999999999999878888788999999999999999999876541 0                0     


Q ss_pred             ---cCcchhHHHHh-hhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhch
Q psy11734         59 ---ASWANVFYIFG-AIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGY  134 (817)
Q Consensus        59 ---~gWr~~f~i~~-~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (817)
                         .+||++|+... +..++..++.+...||.|+++      +.+       .    ++.                    
T Consensus       203 ~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~------~~~-------~----~~~--------------------  245 (438)
T PRK10133        203 SLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN------HSD-------A----KQG--------------------  245 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc------ccc-------c----ccc--------------------
Confidence               25666676433 333333222222222211100      000       0    000                    


Q ss_pred             hhccccccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHH
Q psy11734        135 TLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVG  214 (817)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~  214 (817)
                                                                              +...+.++++|+|+++...+..++
T Consensus       246 --------------------------------------------------------~~~~~~~~ll~~~~~~~~~l~~~~  269 (438)
T PRK10133        246 --------------------------------------------------------SFSASLSRLARIRHWRWAVLAQFC  269 (438)
T ss_pred             --------------------------------------------------------chhhhHHHHHhCchHHHHHHHHHH
Confidence                                                                    001235688999999888888888


Q ss_pred             HHHHHHHHhhchhhHH-HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHH
Q psy11734        215 HDYGLYLISTDLPKYM-SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGA  293 (817)
Q Consensus       215 ~~~~~~~~~~~~p~~l-~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~  293 (817)
                      .....++...|.|.|+ ++.+|+++.++++...+..+++.+|++++|++.||+++|+.          +..+..+..+.+
T Consensus       270 ~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~----------l~~~~~~~~~~~  339 (438)
T PRK10133        270 YVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKV----------LAAYALIAMALC  339 (438)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH----------HHHHHHHHHHHH
Confidence            8888888888999885 66789999999999999999999999999999999999875          455555444444


Q ss_pred             HhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        294 LAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      +.....+ +. .....+.+.+++.+...|.......+..|++.+++.++.. +..+|++++|.+.|.+.|..
T Consensus       340 ~~~~~~~-~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~  408 (438)
T PRK10133        340 LISAFAG-GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAA  408 (438)
T ss_pred             HHHHHcC-Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHHHhc
Confidence            4443333 22 2344555667777788888888787878888888888886 46678999999999888765

>KOG1330|consensus

Probab=99.74  E-value=6.4e-18  Score=178.74  Aligned_cols=285  Identities=14%  Similarity=0.121  Sum_probs=205.0

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      +|.+.|+|++...|.+.++++|.||.++|++++++++....+|..+|.+++..+.+.+..|||.|+..+++++++.++.+
T Consensus       127 ~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~  206 (493)
T KOG1330|consen  127 CRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVF  206 (493)
T ss_pred             HHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999998344499999999999999999999


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      ++.+|+++..+...+++.             +.. .+.                                          
T Consensus       207 ~f~~eP~rga~~~~~~~~-------------~~~-~~~------------------------------------------  230 (493)
T KOG1330|consen  207 LFVREPERGARDEVDGEN-------------KMV-KPF------------------------------------------  230 (493)
T ss_pred             hhccCcccccccccccCC-------------cCC-CCc------------------------------------------
Confidence            988775332111000000             000 000                                          


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHH---hhCCc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSE---VIGLS  237 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~---~~g~s  237 (817)
                                                   .....+.+.+.|++.+....+......+..-++..|.|.+.+.   ..|++
T Consensus       231 -----------------------------ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~  281 (493)
T KOG1330|consen  231 -----------------------------TSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFD  281 (493)
T ss_pred             -----------------------------cchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCc
Confidence                                         0012345667788888888888877777777778888887754   34667


Q ss_pred             ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcc-cchhhHHHHHHHHhHHHHHHHHhhhccCC-ChhHHHHHHHHHHH
Q psy11734        238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDIL-SRTNVRKVFATLGAVLPGVGALAASYVGC-NTSMVAIFFTIGMA  315 (817)
Q Consensus       238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~  315 (817)
                      ..+..+...+...++.+|..++|.++||+.++... .+...-......+.......+.+...... +.+..++++.++..
T Consensus       282 ~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~  361 (493)
T KOG1330|consen  282 HNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGET  361 (493)
T ss_pred             cccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            77777777888899999999999999998765432 33333444455555555555555544432 33444455555554


Q ss_pred             Hhhhccccc-cccccccCCCchhHHHHHHHhhhhh-cccccccccceecccccccCC
Q psy11734        316 FMGFCYASI-RVNPIDLSPNFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNIISINP  370 (817)
Q Consensus       316 ~~g~~~~~~-~~~~~~~~p~~~g~a~g~~~~~~~l-g~~~~~~i~g~l~~~~~~~~~  370 (817)
                      ..-...+.. .....-++|+.|.+++++...+..+ |.+-+|.+.|.+.|+.-++.|
T Consensus       362 ~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~~  418 (493)
T KOG1330|consen  362 ISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYKP  418 (493)
T ss_pred             HHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCCc
Confidence            444444444 4444557789999999999988775 566666699999999866664

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.74  E-value=1.4e-17  Score=171.01  Aligned_cols=280  Identities=16%  Similarity=0.163  Sum_probs=219.5

Q ss_pred             ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc-CcchhHHHHhhhHHHHHhhhhh
Q psy11734          3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA-SWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~-gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      .+.|.|.+.......++|.+.| +|+-+..+|+++....+|+++++.+.-.+.+ +. |||....+.+.++++.++.|+-
T Consensus       107 ~l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~-~~~gW~~aL~~WAl~allAl~~WlP  184 (395)
T COG2807         107 LLAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQ-HSGGWRGALGFWALLALLALLIWLP  184 (395)
T ss_pred             HHHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHH-hhccHHHHHHHHHHHHHHHHHHHhh
Confidence            3578899999999999999999 5788999999999999999999999999998 55 7999999999888888776654


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      -.      .|...  ++                                                               
T Consensus       185 q~------~r~~~--~~---------------------------------------------------------------  193 (395)
T COG2807         185 QA------LREQA--AS---------------------------------------------------------------  193 (395)
T ss_pred             hc------ccccc--cc---------------------------------------------------------------
Confidence            21      11000  00                                                               


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN  241 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a  241 (817)
                                                 .+++..+...++|||..|...+.+..++..+|....|+|.++.| +|+|++++
T Consensus       194 ---------------------------~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~a  245 (395)
T COG2807         194 ---------------------------IATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEA  245 (395)
T ss_pred             ---------------------------cccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHh
Confidence                                       00012233468999999999999999999999999999999999 69999999


Q ss_pred             chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcc
Q psy11734        242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCY  321 (817)
Q Consensus       242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~  321 (817)
                      |.+.+...+.++..++....+.+|...+|.         +......++.++++-+.+.+.+..+.+  ..+.+.+.|..+
T Consensus       246 G~llsl~~l~~~~~~ll~P~la~R~~n~r~---------~~~~~~~~~l~G~~G~~~~P~~~~~lw--~~llG~G~G~~F  314 (395)
T COG2807         246 GSLLSLMQLAQLPTALLIPLLARRSKNQRP---------LVVLALLLMLVGLVGLLLAPGQLPILW--ALLLGLGQGGAF  314 (395)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccch---------HHHHHHHHHHHHHHHHHHhhhhHHHHH--HHHHhCccchHH
Confidence            999999999999999999999998665554         355666666666666655554444444  233444445555


Q ss_pred             ccc--cccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734        322 ASI--RVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  399 (817)
Q Consensus       322 ~~~--~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (817)
                      +..  ........|++.+.-+|+.+.++++-++.||.++|++.|.+|                                 
T Consensus       315 ~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g---------------------------------  361 (395)
T COG2807         315 PLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG---------------------------------  361 (395)
T ss_pred             HHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC---------------------------------
Confidence            544  333344566889999999999999999999999999999987                                 


Q ss_pred             ccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                                 +|+...+..+++.+...+.-+...|++.
T Consensus       362 -----------sw~~~~~~l~~~~i~m~i~Gl~a~r~~~  389 (395)
T COG2807         362 -----------SWSAPLVLLALATLLMLIFGLRAGRNRY  389 (395)
T ss_pred             -----------ChHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence                       6888888888888877777777666543

>TIGR00901 2A0125 AmpG-related permease

Probab=99.74  E-value=1.3e-16  Score=175.20  Aligned_cols=326  Identities=15%  Similarity=0.097  Sum_probs=213.9

Q ss_pred             HhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH-----hhcCcccchhhHHHHHHHHhHHHHHHHHhh
Q psy11734        222 ISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF-----IARDILSRTNVRKVFATLGAVLPGVGALAA  296 (817)
Q Consensus       222 ~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-----g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (817)
                      +....|.++++ .|.|..+.|+.... .+...+ .++.|+++||+     ||||.         ++..+....++.+..+
T Consensus         7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~---------~l~~~~~~~~~~~~~l   74 (356)
T TIGR00901         7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRS---------WLVLTQVLLLSLLLIL   74 (356)
T ss_pred             HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHH---------HHHHHHHHHHHHHHHH
Confidence            34567778877 69999999988654 444444 89999999998     55543         3556666666555555


Q ss_pred             hccCC--ChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhhcccccccccceecccccccCCCCC
Q psy11734        297 SYVGC--NTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDL  373 (817)
Q Consensus       297 ~~~~~--~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~  373 (817)
                      .+..+  +.+.......+...+.....+...+...|.. +|+|+.+.++......+|..+++.+.+.+.+..+...    
T Consensus        75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~----  150 (356)
T TIGR00901        75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANT----  150 (356)
T ss_pred             HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccc----
Confidence            55432  2222223222333344444455566666655 5899999999999999999999999988776653100    


Q ss_pred             CCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHH
Q psy11734        374 SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLG  453 (817)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  453 (817)
                                                       ....+|+..|++.++..+++.+...+..|++++. ++.  +      
T Consensus       151 ---------------------------------~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~-~~~--~------  188 (356)
T TIGR00901       151 ---------------------------------GLITLWGYIFFWTALLILPGLLVTLFLAKEPQED-ASV--P------  188 (356)
T ss_pred             ---------------------------------ccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc-ccc--c------
Confidence                                             0123699999999988777665544433332110 000  0      


Q ss_pred             HHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHH
Q psy11734        454 IMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYG  533 (817)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~  533 (817)
                                               +                                  ++.      .          
T Consensus       189 -------------------------~----------------------------------~~~------~----------  193 (356)
T TIGR00901       189 -------------------------K----------------------------------PLT------Q----------  193 (356)
T ss_pred             -------------------------h----------------------------------hHH------H----------
Confidence                                     0                                  000      0          


Q ss_pred             HHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHh---HHHHHH
Q psy11734        534 YILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLP---VWSLII  610 (817)
Q Consensus       534 ~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~---~~~~~~  610 (817)
                                                               +                .+.++++++++|.   .+...+
T Consensus       194 -----------------------------------------~----------------~~~~~~~~~~~~~~~~~~~~~~  216 (356)
T TIGR00901       194 -----------------------------------------A----------------VLKPIREFFQRKNMIQALLLLL  216 (356)
T ss_pred             -----------------------------------------H----------------HHHHHHHHHHhcCchHHHHHHH
Confidence                                                     0                0012345555554   777777


Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHH
Q psy11734        611 SEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF-LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLP  689 (817)
Q Consensus       611 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~  689 (817)
                      ..++....++....+.|.|+++ +|++.++.+......+ ++.+++.+++|++.||+|+|+.+          ..+.++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l----------~~~~~~~  285 (356)
T TIGR00901       217 LIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL----------LLFGIVQ  285 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH----------HHHHHHH
Confidence            7777888888999999999998 8999999998777665 67889999999999999987643          2444444


Q ss_pred             HHHHHHHHhh--c--------CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHH
Q psy11734        690 GVGALAASYV--G--------CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC  748 (817)
Q Consensus       690 ~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~  748 (817)
                      ++....+.+.  .        ++.+......++..++.+...+...+..++..| ++||+.+|+.+...+
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       286 ALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             HHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence            4444433332  1        123444445555666667777888888888887 889999999887654

>KOG4686|consensus

Probab=99.74  E-value=1.9e-17  Score=162.42  Aligned_cols=271  Identities=16%  Similarity=0.152  Sum_probs=201.9

Q ss_pred             ccccCChhhHHHHHHHHHHHHHHhhhhchhhcc-ccCchHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHHHHHhhhcc
Q psy11734        514 AKFDWDERTQGVILSAFYYGYILTHIPGGILSQ-KFGGKHTLGLGFLSTAIFTLLTPLIA-HSGPVSMTVLRFLEGVGED  591 (817)
Q Consensus       514 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~D-r~Grr~~l~~~l~~~~i~~~l~~~a~-~~s~~~l~~~R~l~Gig~~  591 (817)
                      .|.+++.++..++-+.|..-..+-+.++|++.| |+|.|+.-++-....-++.+..+... ...+|++.++|++-|+|.-
T Consensus        72 ~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgE  151 (459)
T KOG4686|consen   72 LDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGE  151 (459)
T ss_pred             cccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCch
Confidence            377788889999999999999999999999999 68998877777777777877776532 2289999999999999876


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       152 SlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~  231 (459)
T KOG4686|consen  152 SLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALS  231 (459)
T ss_pred             hhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             --------------cCc------hhHHhhc-CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH
Q psy11734        592 --------------LET------PWAAILS-SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL  650 (817)
Q Consensus       592 --------------~~~------~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~  650 (817)
                                    ...      ++.++.. .|.+|.+.+.+.++..+.+.+....|.++++.+|+|+..++.+.+....
T Consensus       232 lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~  311 (459)
T KOG4686|consen  232 LGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYG  311 (459)
T ss_pred             hhhhhhHHHHHHhhhcCcccCCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhh
Confidence                          000      0111111 4679999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccc
Q psy11734        651 IMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPID  730 (817)
Q Consensus       651 ~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (817)
                      ...+.++..|.++||.|++-+.         ...+++....+-..+.+..-+|+...   .+.+....+.....|..+..
T Consensus       312 Isav~spvfg~i~Dk~G~n~~w---------v~~a~~~tl~~H~~l~Ft~lsPy~~m---~~lGLsysllAcslWP~va~  379 (459)
T KOG4686|consen  312 ISAVLSPVFGAISDKYGFNLWW---------VASACILTLLGHSGLFFTFLSPYTSM---TFLGLSYSLLACSLWPCVAS  379 (459)
T ss_pred             hhhhhhhhHHHhHhhhcceehh---------HHHHHHHHHHHhhhHHhhhccHHHHH---HHHhhhHHHHHHHHhhhhhh
Confidence            9999999999999999987542         12222222233333333322444333   33344444444445656666


Q ss_pred             cCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCcc-ccHHHHHHHHHHHHHHHHHHHHHhccCcc
Q psy11734        731 LSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTL-LEWRVVFWIMFLTLFISNVFFVLFGSGEV  796 (817)
Q Consensus       731 ~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  796 (817)
                      +.| ++.|++.|.++.++++|-.+.|.+.|.+.|..|. .+....|.+++...+++..+.+...++.+
T Consensus       380 ~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~  447 (459)
T KOG4686|consen  380 LVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQS  447 (459)
T ss_pred             hCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheecccc
Confidence            677 7799999999999999999999999999998752 23344566666667777766666654443

>KOG0253|consensus

Probab=99.74  E-value=9.5e-17  Score=163.49  Aligned_cols=299  Identities=14%  Similarity=0.187  Sum_probs=231.8

Q ss_pred             CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734        444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ  523 (817)
Q Consensus       444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  523 (817)
                      .+.+++|++....-.++....+-....+...|.+..                                   +++.+..|.
T Consensus        71 gfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~-----------------------------------~w~~s~~q~  115 (528)
T KOG0253|consen   71 GFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDE-----------------------------------VWGPSEGQA  115 (528)
T ss_pred             CcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----------------------------------hhchhhhhh
Confidence            357899999999999999999999999988888887                                   999999999


Q ss_pred             HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc------------
Q psy11734        524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED------------  591 (817)
Q Consensus       524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~------------  591 (817)
                      .++.+....++.+++..+|..+|++|||+.+.+..++..+...+.++++  |+..+.+.|.+.|+|.|            
T Consensus       116 ~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~sp--nf~~L~~f~~l~~~g~gg~pv~~~~yle~  193 (528)
T KOG0253|consen  116 PLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASP--NFASLCVFRALWGFGVGGLPVDSAIYLEF  193 (528)
T ss_pred             hHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCC--CeehhhHHHHHHhccCCCccHhHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999  99999999999999998            


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       194 lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~ki  273 (528)
T KOG0253|consen  194 LPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKI  273 (528)
T ss_pred             ccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             --------------------------------------cCchhHHhhc---CHhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy11734        592 --------------------------------------LETPWAAILS---SLPVWSLIISEVGHDYGFYLISSDLPKYM  630 (817)
Q Consensus       592 --------------------------------------~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l  630 (817)
                                                            ......+++.   .|+..+++..++...+.+|+........+
T Consensus       274 ArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelf  353 (528)
T KOG0253|consen  274 ARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELF  353 (528)
T ss_pred             HHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence                                                  0001122332   24456666777777788888765444433


Q ss_pred             H-----------------HHhC--CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHH
Q psy11734        631 S-----------------QVIG--LSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGV  691 (817)
Q Consensus       631 ~-----------------~~~g--~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~  691 (817)
                      +                 ...+  .+...-=.-.....++...|.++.+++.||+|||+++          +.++++..+
T Consensus       354 qsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTM----------al~l~~f~i  423 (528)
T KOG0253|consen  354 QSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTM----------ALSLILFGI  423 (528)
T ss_pred             hccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHH----------HHHHHHHHH
Confidence            3                 2111  1112222234456788999999999999999999875          477777777


Q ss_pred             HHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccH
Q psy11734        692 GALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEW  770 (817)
Q Consensus       692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~  770 (817)
                      +.+++.... +......+.+.+-++....+...+.+..|++| +.|+++.|..+.+..+|+.+.|.+. ...+...    
T Consensus       424 flfll~~c~-~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s~----  497 (528)
T KOG0253|consen  424 FLFLLTTCK-TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELST----  497 (528)
T ss_pred             HHHHHHHhc-CcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccce----
Confidence            776666554 55555566666666777778889999999999 7899999999999999999999998 5555431    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734        771 RVVFWIMFLTLFISNVFFVLFGSGE  795 (817)
Q Consensus       771 ~~~~~~~~~~~~i~~~~~~~~~~~~  795 (817)
                      ..+..+.+++++++.+...+++-+.
T Consensus       498 sl~i~vy~~~~ilagIavcffPiEt  522 (528)
T KOG0253|consen  498 SLPIFVYGALFILAGIAVCFFPIET  522 (528)
T ss_pred             eehHHHHHHHHHHHHHHheeeeecc
Confidence            2455566666666666666664433

>TIGR00898 2A0119 cation transport protein

Probab=99.74  E-value=1.6e-17  Score=191.41  Aligned_cols=278  Identities=13%  Similarity=0.127  Sum_probs=176.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      +|+++|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+    ||+.|++.+++.++..+.. 
T Consensus       186 ~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~-  260 (505)
T TIGR00898       186 FRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLS-  260 (505)
T ss_pred             HHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHH-
Confidence            48999999999999999999999999999999999999999999999998876543    9999999988777766555 


Q ss_pred             heeccCCCCCC-CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         81 ILCFNDPKSHP-YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        81 ~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      +++||+|+... +.+.++..+..++..+   .++.+.. ++..                                     
T Consensus       261 ~~~~esp~~l~~~~~~~~a~~~l~~~~~---~~~~~~~-~~~~-------------------------------------  299 (505)
T TIGR00898       261 WFVPESPRWLISQGRIEEALKILQRIAK---INGKKLP-AEVL-------------------------------------  299 (505)
T ss_pred             HhcCCChHHHHHCCCHHHHHHHHHHHHH---HcCCCCC-HHHH-------------------------------------
Confidence            55666553110 0111111111111111   0000000 0000                                     


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhh-ccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLE-GVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSV  238 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~  238 (817)
                                           ....-+ ..+++.+.++++++|+|.++...+...+.........+..+.++.+ .+.+.
T Consensus       300 ---------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  357 (505)
T TIGR00898       300 ---------------------SLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-LGGNI  357 (505)
T ss_pred             ---------------------hhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCCh
Confidence                                 000000 0011123467899999987666555444333222222222222222 34442


Q ss_pred             cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCC-hhHHHHHHHHHHHHh
Q psy11734        239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAIFFTIGMAFM  317 (817)
Q Consensus       239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~  317 (817)
                         .......++..+++.++.+++.||+|||+.          ...+..+.+++++.+...++. .........+..++.
T Consensus       358 ---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  424 (505)
T TIGR00898       358 ---YLDLFISGLVELPAKLITLLLIDRLGRRYT----------MAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGI  424 (505)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHH----------HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence               233445567788899999999999999875          666666666666666555433 233444444555555


Q ss_pred             hhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccc
Q psy11734        318 GFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVG  359 (817)
Q Consensus       318 g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g  359 (817)
                      ....+....+..|..| +.|+++.|+.+....+|++++|.+.+
T Consensus       425 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~  467 (505)
T TIGR00898       425 TSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY  467 (505)
T ss_pred             HHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence            5556666777888777 68999999999999999999999887

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.74  E-value=3.3e-17  Score=182.43  Aligned_cols=192  Identities=16%  Similarity=0.154  Sum_probs=150.2

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|++.+...+...+++.|++|+|||+++.++.+....+|..++|.+++.+.+ ..|||+.|++.+.+.++..++.++
T Consensus        98 ~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~-~~g~~~~~~~~~~~~~i~~~~~~~  176 (392)
T PRK10473         98 RFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML-KFPWQSLFYTMAAMGILVLLLSLF  176 (392)
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcChHHHHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999888 889999999998888887777666


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      .+||++++++.   ++.        .                                                      
T Consensus       177 ~~~~~~~~~~~---~~~--------~------------------------------------------------------  191 (392)
T PRK10473        177 ILKETRPARAP---AAS--------S------------------------------------------------------  191 (392)
T ss_pred             HcCCCCCcccC---Ccc--------c------------------------------------------------------
Confidence            66654321100   000        0                                                      


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN  241 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a  241 (817)
                                                    .....++.+|||.++...+...+..........+.|.++++.+|+++.+.
T Consensus       192 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  241 (392)
T PRK10473        192 ------------------------------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEY  241 (392)
T ss_pred             ------------------------------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHH
Confidence                                          01123466788887766666555555566667778989988889999999


Q ss_pred             chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc
Q psy11734        242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV  299 (817)
Q Consensus       242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (817)
                      +.......++..++.++.+++.||+++|+.          ...+..+..++...+...
T Consensus       242 ~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~  289 (392)
T PRK10473        242 AIIMALTAGVSMTVSFSTPFALGIFKPRTL----------MLTSQVLFLAAGITLALS  289 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCHHHH----------HHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999875          555655555555555443

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.74  E-value=5.3e-16  Score=174.70  Aligned_cols=354  Identities=16%  Similarity=0.149  Sum_probs=265.7

Q ss_pred             HHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHH----HHhhcCcccchhhHHHHHHHHhHH
Q psy11734        213 VGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALAD----FFIARDILSRTNVRKVFATLGAVL  288 (817)
Q Consensus       213 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~d----k~g~r~~~~~~~~~~~~~~~~~~~  288 (817)
                      +...........+++.|+++..|.++...|.+.....+...+..++.|.++|    |+||||.         .+..+...
T Consensus        11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp---------~~l~g~i~   81 (428)
T PF13347_consen   11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRP---------WILIGAIL   81 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccce---------EeehhhHH
Confidence            4455566666778999999999999999999999999999999999999999    7888877         37788888


Q ss_pred             HHHHHHhhhccCC-C------hhHHHHHHHHHHHHhhhccccccccccccCC--CchhHHHHHHHhhhhhcccccccccc
Q psy11734        289 PGVGALAASYVGC-N------TSMVAIFFTIGMAFMGFCYASIRVNPIDLSP--NFSGTIMALSNGLGCVSGMVAPLTVG  359 (817)
Q Consensus       289 ~~~~~~~~~~~~~-~------~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p--~~~g~a~g~~~~~~~lg~~~~~~i~g  359 (817)
                      .++++.++...++ +      ..+..+...+...+.........+...|..+  ++|.+..+..+....+|+.+...+.+
T Consensus        82 ~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~  161 (428)
T PF13347_consen   82 LALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAP  161 (428)
T ss_pred             HHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence            8887777766522 1      1122333333344444445555667777665  68999999999999998887777777


Q ss_pred             eecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734        360 FLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ  439 (817)
Q Consensus       360 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~  439 (817)
                      .+.+..++.                                      ....+|+...++.+++.+++.++..+..||+++
T Consensus       162 ~l~~~~g~~--------------------------------------~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~  203 (428)
T PF13347_consen  162 ILVSWFGGG--------------------------------------DTSNGYRWMALVLAIVGLVFFLITFFFVKERSV  203 (428)
T ss_pred             hhhhhhccC--------------------------------------ccchHHHHHHHHHHHHHHHHhhhhhheeeeccc
Confidence            776554310                                      111379999999999988888887777666221


Q ss_pred             cccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCC
Q psy11734        440 YWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWD  519 (817)
Q Consensus       440 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  519 (817)
                      +.+++.+                                                                    +.+  
T Consensus       204 ~~~~~~~--------------------------------------------------------------------~~~--  213 (428)
T PF13347_consen  204 EVTEQEK--------------------------------------------------------------------KIS--  213 (428)
T ss_pred             ccccccc--------------------------------------------------------------------ccc--
Confidence            1111100                                                                    000  


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHh
Q psy11734        520 ERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAI  599 (817)
Q Consensus       520 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~  599 (817)
                                                                                              .++.++++
T Consensus       214 ------------------------------------------------------------------------~~~~~~~~  221 (428)
T PF13347_consen  214 ------------------------------------------------------------------------LRDSLRSL  221 (428)
T ss_pred             ------------------------------------------------------------------------cccchhhh
Confidence                                                                                    12345778


Q ss_pred             hcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhH
Q psy11734        600 LSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRK  679 (817)
Q Consensus       600 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~  679 (817)
                      ++||+++......++............+.|.+++.|.+ ...+.+.....+..+++.++.++++||+|+|+.+       
T Consensus       222 ~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~-------  293 (428)
T PF13347_consen  222 FRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVY-------  293 (428)
T ss_pred             cccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeeh-------
Confidence            89999999999999988888888889999999988877 5667777788899999999999999999999875       


Q ss_pred             HHHHHHHHHHHHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHHHHHH
Q psy11734        680 VFATLGAVLPGVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGLGCVS  750 (817)
Q Consensus       680 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g  750 (817)
                         ..+..+.+++.+++.+.+ .+.+...+...+.+.+.+......++...|+.+        +..|...|+.+....++
T Consensus       294 ---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~  370 (428)
T PF13347_consen  294 ---IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIG  370 (428)
T ss_pred             ---hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHH
Confidence               377777777777666654 466777777777888877777777777777654        34799999999999999


Q ss_pred             HhHHHHHHHHhhcCCc
Q psy11734        751 GMVAPLTVGFLTQNKT  766 (817)
Q Consensus       751 ~~i~p~~~g~~~~~~g  766 (817)
                      ..+++.+.+.+.+..|
T Consensus       371 ~~la~~i~g~~l~~~G  386 (428)
T PF13347_consen  371 QGLAGAIVGLLLALVG  386 (428)
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            9999999998887654

>TIGR00896 CynX cyanate transporter

Probab=99.73  E-value=1.3e-17  Score=183.14  Aligned_cols=256  Identities=16%  Similarity=0.093  Sum_probs=185.6

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc--CcchhHHHHhhhHHHHHhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA--SWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~--gWr~~f~i~~~~~~i~~~~~   79 (817)
                      |+++|+|.+...+....++.|++| +||++++++++.+..+|..+++.+++.+.+ ..  +||+.|.+.+.+.++...  
T Consensus        94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~-~~~~~w~~~f~~~~~~~~~~~~--  169 (355)
T TIGR00896        94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQ-HSGGHWQQALAWWALPALLALL--  169 (355)
T ss_pred             HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhHHHHHHHHHHHHHHHHH--
Confidence            788999999888888889999996 689999999999999999999999998887 54  399999887655443322  


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                       ..+|+.+++++   + +.              +.                                             
T Consensus       170 -~~~~~~~~~~~---~-~~--------------~~---------------------------------------------  185 (355)
T TIGR00896       170 -AWIPQVRRRVA---A-NQ--------------TT---------------------------------------------  185 (355)
T ss_pred             -HHhhhhccccC---C-CC--------------CC---------------------------------------------
Confidence             22333221110   0 00              00                                             


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                                                      .+.+.++++|||.++...+..++....++....|+|.|+++ +|+|..
T Consensus       186 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~  232 (355)
T TIGR00896       186 --------------------------------TRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAA  232 (355)
T ss_pred             --------------------------------CCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHH
Confidence                                            01124467889998888777777788888889999999987 699999


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~  319 (817)
                      +.+.......++.++++++.|++.||+++|+.         ....+..+..++.+.+.+.+++....  ...+.+.+.+.
T Consensus       233 ~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~g~~~g~  301 (355)
T TIGR00896       233 TAGSLLALMQLAQAASALLIPALARRVKDQRG---------IVAVLAVLQLVGLCGLLFAPMHGLWA--WALVLGLGQGG  301 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHhhhccchH---------HHHHHHHHHHHHHHHHHHhhhhHHHH--HHHHHHHhhhh
Confidence            99999999999999999999999999965443         14455555555555554444332222  23344455555


Q ss_pred             ccccccccc-cccCC-CchhHHHHHHHhhhhhcccccccccceecccccccC
Q psy11734        320 CYASIRVNP-IDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISIN  369 (817)
Q Consensus       320 ~~~~~~~~~-~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~  369 (817)
                      ..+...... .+.++ +++++..++.+.+++++++++|.+.|.+.|+.|+|.
T Consensus       302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~  353 (355)
T TIGR00896       302 AFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL  353 (355)
T ss_pred             HhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            555443333 33443 678999999999999999999999999999987654

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.73  E-value=5.9e-17  Score=176.82  Aligned_cols=257  Identities=26%  Similarity=0.425  Sum_probs=215.1

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...+...+++.|++|+|||+++.++......+|..+++.+++.+.+ ..+||+.|++.+.+.++..+...
T Consensus        93 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  171 (352)
T cd06174          93 GRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-SLGWRWLFLILAILGLLLALLLL  171 (352)
T ss_pred             HHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999999999999 88999999998877666655443


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +. +                                                                            
T Consensus       172 ~~-~----------------------------------------------------------------------------  174 (352)
T cd06174         172 FL-L----------------------------------------------------------------------------  174 (352)
T ss_pred             HH-H----------------------------------------------------------------------------
Confidence            32 0                                                                            


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                                |.++...+..++..........+.|.++++.+|.+..+
T Consensus       175 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (352)
T cd06174         175 ------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAE  212 (352)
T ss_pred             ------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH
Confidence                                                      34566777777888888889999999999877999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcC-cccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARD-ILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~  319 (817)
                      .+.......++..+++++.+++.||.++|+ .          ...+..+..++........ +.........+.+.+.+.
T Consensus       213 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~  281 (352)
T cd06174         213 AGLLLSLFGLGGILGALLGGLLSDRLGRRRLL----------LLIGLLLAALGLLLLALAP-SLALLLVALLLLGFGLGF  281 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999988 5          6667777677666666554 455555566666666667


Q ss_pred             ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccc
Q psy11734        320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPL  398 (817)
Q Consensus       320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (817)
                      ..+.......+..| ++|++.+|+.+..+.+++.++|.+.|.+.|+.                                 
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~---------------------------------  328 (352)
T cd06174         282 AFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG---------------------------------  328 (352)
T ss_pred             cchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------------------------------
Confidence            77777777777766 89999999999999999999999999888753                                 


Q ss_pred             cccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734        399 TVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF  433 (817)
Q Consensus       399 ~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~  433 (817)
                                  +|+..|++.+++.+++.+...++
T Consensus       329 ------------~~~~~~~~~~~~~~i~~i~~~~~  351 (352)
T cd06174         329 ------------GYGGVFLILAALALLAALLLLLL  351 (352)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHheec
Confidence                        58889999988888887766543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.72  E-value=2.9e-17  Score=182.10  Aligned_cols=255  Identities=16%  Similarity=0.102  Sum_probs=187.6

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |.++|++.+...|...+++.++  ++||+++.+.......+|.++||++++++.+ +.|||..|++.+...++.. +..+
T Consensus       101 ~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~-~~g~~~~f~~~~~~~~~~~-~~~~  176 (382)
T PRK11128        101 IGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS-WFGEQAILWILTAGVASML-LGQL  176 (382)
T ss_pred             HHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH-HcChhHHHHHHHHHHHHHH-HHHH
Confidence            6788998888999888888876  4678999999999999999999999999999 8999999998876444433 3333


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      +.||++   +. ++++++       .                                                      
T Consensus       177 ~~~~~~---~~-~~~~~~-------~------------------------------------------------------  191 (382)
T PRK11128        177 LRPTIM---PQ-GESRQQ-------E------------------------------------------------------  191 (382)
T ss_pred             ccCCCC---Cc-cccccc-------c------------------------------------------------------
Confidence            333321   11 000000       0                                                      


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN  241 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a  241 (817)
                                                  ++.+.++++++|||+++...+..++..........+.|.|+++ .|++..+.
T Consensus       192 ----------------------------~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~  242 (382)
T PRK11128        192 ----------------------------SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTI  242 (382)
T ss_pred             ----------------------------ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHH
Confidence                                        0012347889999999998888888777777778888999976 79999999


Q ss_pred             chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcc
Q psy11734        242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCY  321 (817)
Q Consensus       242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~  321 (817)
                      |.+.....++..+..++.|++.||+++|+.          +..+....++....+...+ +.+...+...+.+...+...
T Consensus       243 g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~----------l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~  311 (382)
T PRK11128        243 GYLWSLGVVAEVLIFAFSNRLFRRWSARDL----------LLLSAICGVVRWGLMGSTT-ALPWLIVIQILHCGTFTVCH  311 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHH----------HHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHH
Confidence            998888888999999999999999998875          5666666666655554443 44444444444455555555


Q ss_pred             ccccccccccCCCchhHHHHHHHhh-hhhcccccccccceecccc
Q psy11734        322 ASIRVNPIDLSPNFSGTIMALSNGL-GCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       322 ~~~~~~~~~~~p~~~g~a~g~~~~~-~~lg~~~~~~i~g~l~~~~  365 (817)
                      +....+..+.+++++++..++.+.. ..+|.++||.+.|.+.|..
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~  356 (382)
T PRK11128        312 LAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL  356 (382)
T ss_pred             HHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            5555556666677788899988744 4567789999999999886

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.72  E-value=1.5e-17  Score=210.34  Aligned_cols=263  Identities=16%  Similarity=0.100  Sum_probs=191.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      +|++||++.+...|...+++.|++|+++|++++|+.+++.++|.++||+++|++.+ ..|||+.|+..++..++. ++..
T Consensus       114 ~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~-~~~~~~~~~~~~~~~~~~-~~~~  191 (1140)
T PRK06814        114 ALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI-SGNFVILVALLMGIAVLG-WLAS  191 (1140)
T ss_pred             HHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHH-HHHH
Confidence            48999999999999999999999999999999999999999999999999999999 899999995554444444 3344


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +.+|+++++++..+.+.. ..                                                           
T Consensus       192 ~~~~~~~~~~~~~~~~~~-~~-----------------------------------------------------------  211 (1140)
T PRK06814        192 LFIPKTGNAAPDLKIDRN-II-----------------------------------------------------------  211 (1140)
T ss_pred             hhCCCCCCCCCCCeeccc-hH-----------------------------------------------------------
Confidence            444444322111000000 00                                                           


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                   +.....++.+.++|.++...+..++.....+++..++|.|+++.+|.++.+
T Consensus       212 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~  262 (1140)
T PRK06814        212 -----------------------------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENV  262 (1140)
T ss_pred             -----------------------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHH
Confidence                                         000123677889999999999988888888888899999999989999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-------------------CC
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-------------------GC  301 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~  301 (817)
                      .|++.....+++++|+++.|+++||..+++.          +..+.++..++.+.+.+.                   ..
T Consensus       263 ~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  332 (1140)
T PRK06814        263 ATLFLAVFSVGVAVGSFLASKLSEGRITLLY----------VPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKR  332 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCceeeee----------ehHHHHHHHHHHHHHHhcccccccccccccchhhhhccc
Confidence            9999999999999999999999988776654          222323222222222111                   12


Q ss_pred             ChhHHHHHHHHHHHHhhhcccccccccccc-CCCchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734        302 NTSMVAIFFTIGMAFMGFCYASIRVNPIDL-SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  364 (817)
Q Consensus       302 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~-~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~  364 (817)
                      +.+...+..++.+.+.+...+...+..++. +++++|+++|+.|++.+++..+++.+.|.+.+.
T Consensus       333 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~  396 (1140)
T PRK06814        333 HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL  396 (1140)
T ss_pred             ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            333344444444455555555555565554 457999999999999999999999998887643

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.72  E-value=6.1e-16  Score=176.29  Aligned_cols=360  Identities=10%  Similarity=0.020  Sum_probs=228.9

Q ss_pred             HHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH----hhcCcccchhhHHHHHHHH
Q psy11734        210 ISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF----IARDILSRTNVRKVFATLG  285 (817)
Q Consensus       210 i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~----g~r~~~~~~~~~~~~~~~~  285 (817)
                      +..+..+.....+..|++.|++++.|.++..+|.+....-+...+..++.|+++||.    ||||.         ++..+
T Consensus        13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp---------~il~g   83 (473)
T PRK10429         13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKP---------WILIG   83 (473)
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcch---------hHhhh
Confidence            344445666677788899999999999999999999999999999999999999954    77665         46677


Q ss_pred             hHHHHHHHHhhhccCC-C-h---hHHHHHHHHHHHHhhhccccccccccccC--CCchhHHHHHHHhhhhhccccccccc
Q psy11734        286 AVLPGVGALAASYVGC-N-T---SMVAIFFTIGMAFMGFCYASIRVNPIDLS--PNFSGTIMALSNGLGCVSGMVAPLTV  358 (817)
Q Consensus       286 ~~~~~~~~~~~~~~~~-~-~---~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--p~~~g~a~g~~~~~~~lg~~~~~~i~  358 (817)
                      ....++++.++...++ + .   .+..+...+...+.........+...|+.  +++|.+.++......++|+.+.+.+.
T Consensus        84 ~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~  163 (473)
T PRK10429         84 TLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFT  163 (473)
T ss_pred             hHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7776666555544321 1 1   12222222233334444444566666755  47899999988787777766665554


Q ss_pred             ceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        359 GFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       359 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                      ..+.+..|.                                      .....+|+....+.+++.+++.....+..||+.
T Consensus       164 ~~~~~~~g~--------------------------------------~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~  205 (473)
T PRK10429        164 LPFVNYVGG--------------------------------------GDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY  205 (473)
T ss_pred             HHHHHHhCC--------------------------------------CchhhhHHHHHHHHHHHHHHHHHHHHcCceecC
Confidence            443332210                                      001236777777777776666555544444332


Q ss_pred             ccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccC
Q psy11734        439 QYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDW  518 (817)
Q Consensus       439 ~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (817)
                      ++.+++. +                               +                           +      +..  
T Consensus       206 ~~~~~~~-~-------------------------------~---------------------------~------~~~--  218 (473)
T PRK10429        206 SSDNQVS-A-------------------------------E---------------------------G------SHL--  218 (473)
T ss_pred             Ccccccc-c-------------------------------c---------------------------c------cCC--
Confidence            1100000 0                               0                           0      000  


Q ss_pred             ChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHH
Q psy11734        519 DERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAA  598 (817)
Q Consensus       519 s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~  598 (817)
                                                                              +.                ++.++.
T Consensus       219 --------------------------------------------------------~~----------------~~~~~~  226 (473)
T PRK10429        219 --------------------------------------------------------TL----------------KDIVAL  226 (473)
T ss_pred             --------------------------------------------------------CH----------------HHHHHH
Confidence                                                                    00                112455


Q ss_pred             hhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734        599 ILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR  678 (817)
Q Consensus       599 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r  678 (817)
                      +++||.++.+....++.....+....+.+.|.+...+ +....+.+.....+..+++.++.++++||+|+|+.+      
T Consensus       227 ~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~------  299 (473)
T PRK10429        227 IYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW------  299 (473)
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH------
Confidence            6789998888888888887777777777766665444 556666777777789999999999999999998653      


Q ss_pred             HHHHHHHHHHHHHHHHHHHh---h-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHH
Q psy11734        679 KVFATLGAVLPGVGALAASY---V-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGL  746 (817)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~  746 (817)
                          ..+..+..++.+.+..   . +.+.+..++...+.+.+.+......++..+|..+        +..|...|..++.
T Consensus       300 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~  375 (473)
T PRK10429        300 ----AGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMV  375 (473)
T ss_pred             ----HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHH
Confidence                2344433333333221   1 2233444444444555555555666666666532        4467799999999


Q ss_pred             HHHHHhHHHHHHHHhhcCCc
Q psy11734        747 GCVSGMVAPLTVGFLTQNKT  766 (817)
Q Consensus       747 ~~~g~~i~p~~~g~~~~~~g  766 (817)
                      ..++..+++.+.|.+.+..|
T Consensus       376 ~K~~~al~~~i~g~~l~~~G  395 (473)
T PRK10429        376 VKGGSAFAAFFIGVVLGLIG  395 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999987654

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.72  E-value=3.6e-16  Score=168.58  Aligned_cols=387  Identities=13%  Similarity=0.137  Sum_probs=253.0

Q ss_pred             hhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHH
Q psy11734        200 LYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRK  279 (817)
Q Consensus       200 ~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~  279 (817)
                      .||+++|......+...+.+-....+.|.+++++.|+|.+++|.+.+...+..++.+++.|.++||.+.||.       .
T Consensus         4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~-------L   76 (412)
T PF01306_consen    4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKH-------L   76 (412)
T ss_dssp             CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSH-------H
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHH-------H
Confidence            578899999999999888888888999999998889999999999999999999999999999999998874       1


Q ss_pred             HHHHHHhH--HHHHHHHhh--hccCCChhHHHHHHHHHHHHhhhccccccccccccC---CCchhHHHHHHHhhhhhccc
Q psy11734        280 VFATLGAV--LPGVGALAA--SYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS---PNFSGTIMALSNGLGCVSGM  352 (817)
Q Consensus       280 ~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~---p~~~g~a~g~~~~~~~lg~~  352 (817)
                       +..+...  ..+..+...  .....+   .+....+++...+..........+...   .++.+--+|=.-..+++|.+
T Consensus        77 -l~~i~~l~~l~~pff~~v~~pll~~n---~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~a  152 (412)
T PF01306_consen   77 -LWFIAILLLLFGPFFIYVFGPLLQSN---FWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFA  152 (412)
T ss_dssp             -HHHHHHHHHTCHHHHHHTHHHHHHTT----HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHH
Confidence             1111111  112222211  111111   112222222222222222211111111   13345556777788889999


Q ss_pred             ccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhee
Q psy11734        353 VAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVL  432 (817)
Q Consensus       353 ~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~  432 (817)
                      ++..++|.+.+.                                              +-+..||+..+..++..++..+
T Consensus       153 i~s~~~G~L~~i----------------------------------------------~p~~~fwi~s~~~~il~lll~~  186 (412)
T PF01306_consen  153 IASLLAGILFNI----------------------------------------------NPNIIFWIASAAAIILLLLLLL  186 (412)
T ss_dssp             HHHHHHHHHHHH----------------------------------------------HHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHhheeeee----------------------------------------------CccHHHHHHHHHHHHHHHHHHH
Confidence            999999988764                                              3567788776655544444444


Q ss_pred             eccccccc-ccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccc
Q psy11734        433 FGSGEVQY-WNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTT  511 (817)
Q Consensus       433 ~~~~~~~~-~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (817)
                      .++++.++ ..++                                                                   
T Consensus       187 ~~~~~~~~~~~~~-------------------------------------------------------------------  199 (412)
T PF01306_consen  187 LKPDVPPQAEVAD-------------------------------------------------------------------  199 (412)
T ss_dssp             S---SSSSS-SST-------------------------------------------------------------------
T ss_pred             cCCcCchhhhhhc-------------------------------------------------------------------
Confidence            43222211 0000                                                                   


Q ss_pred             ccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734        512 LDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED  591 (817)
Q Consensus       512 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~  591 (817)
                         +.+.+.+..                                                   +                
T Consensus       200 ---~~~~~~~~~---------------------------------------------------~----------------  209 (412)
T PF01306_consen  200 ---ALGAKKDKV---------------------------------------------------S----------------  209 (412)
T ss_dssp             ---TSSS-------------------------------------------------------------------------
T ss_pred             ---ccccCCCCC---------------------------------------------------c----------------
Confidence               000000000                                                   0                


Q ss_pred             cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhC---CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734        592 LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIG---LSVAENGVLSALPFLIMWLVSMSSSALADYLIV  668 (817)
Q Consensus       592 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g---~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~  668 (817)
                       .+...+++|+|++|.+.+........++.+-...|.|++...+   .+....|++.+...+..++.-.+.+++.+|+|.
T Consensus       210 -~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~  288 (412)
T PF01306_consen  210 -LKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGA  288 (412)
T ss_dssp             -HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred             -HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence             0134678999999999998888888888888889999886422   344567888888889999999999999999999


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHH-HHH
Q psy11734        669 RDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALS-NGL  746 (817)
Q Consensus       669 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~-~~~  746 (817)
                      |+.+          .++..++.+=.....+.+ +++.....-.+-+.-..+......-++.+.+| |..++...+. +..
T Consensus       289 k~~L----------llag~i~~iRi~~~~~~~-~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~  357 (412)
T PF01306_consen  289 KNLL----------LLAGVIMAIRIIGSGFAT-NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFA  357 (412)
T ss_dssp             HHHH----------HHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTT
T ss_pred             HhHH----------HHHHHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHH
Confidence            8764          344444444444555554 77777777777777777777777778888887 6678888885 677


Q ss_pred             HHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734        747 GCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGE  795 (817)
Q Consensus       747 ~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  795 (817)
                      .+++..+.+.+.|.+.|+.|   ++..|++++.+.++..++..+..+++
T Consensus       358 ~~~~~~i~s~~~G~lyd~~G---~~~tylimg~iv~~~~li~~f~l~~~  403 (412)
T PF01306_consen  358 KQIGIIILSPLAGYLYDRIG---FQHTYLIMGLIVLPFTLISAFTLKKD  403 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred             HHHHHHHHhhhHHhhHhhcC---cHHHHHHHHHHHHHHHHHheeeecCC
Confidence            88999999999999999986   77888899988887777776664433

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.71  E-value=6.1e-17  Score=180.82  Aligned_cols=279  Identities=14%  Similarity=0.108  Sum_probs=183.9

Q ss_pred             cccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHHhhhhhe
Q psy11734          4 MSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWFAFWCIL   82 (817)
Q Consensus         4 l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~~~~~~~   82 (817)
                      +.++..+...|...+++.|++|+|||+++.++...+..+|..+++.+++.+.+ . .|||.+|++.+.+.++..+. .+.
T Consensus       103 ~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~-~~~gw~~~f~i~a~~~l~~~l~-~~~  180 (402)
T PRK11902        103 LVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD-RVLGWGNTYLLMAGLMLAGALT-TLW  180 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh-cccCHHHHHHHHHHHHHHHHHH-HHh
Confidence            45566677788899999999999999999999999999999999999999988 5 49999999988776655443 344


Q ss_pred             eccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHH
Q psy11734         83 CFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTA  162 (817)
Q Consensus        83 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (817)
                      .||+++.++. +++.++                                                               
T Consensus       181 ~~e~~~~~~~-~~~~~~---------------------------------------------------------------  196 (402)
T PRK11902        181 APEPEVPARP-PRSLGE---------------------------------------------------------------  196 (402)
T ss_pred             cCCCcccccc-cchhHH---------------------------------------------------------------
Confidence            4543221110 000000                                                               


Q ss_pred             HHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccc
Q psy11734        163 LLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENG  242 (817)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag  242 (817)
                                                  +.++++++++|||.++...+..++..........+.+.++.+.+|+++.+.+
T Consensus       197 ----------------------------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g  248 (402)
T PRK11902        197 ----------------------------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVG  248 (402)
T ss_pred             ----------------------------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence                                        0122467889999998877776666555444444566677777899999999


Q ss_pred             hhhhhhH-HHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH---hhhccCCChhHHHHHHHH----HH
Q psy11734        243 VLSALPF-LIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL---AASYVGCNTSMVAIFFTI----GM  314 (817)
Q Consensus       243 ~~~~~~~-i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l----~~  314 (817)
                      ++....+ ++..++.+++|++.||+++|+.          ...+..+..+...   .+...+++.+.......+    .+
T Consensus       249 ~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~----------l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g  318 (402)
T PRK11902        249 IVNKTLGLAATIVGALAGGTLMVRLGLYRS----------LMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGG  318 (402)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHhHHHH----------HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence            8876554 5689999999999999998874          3333333333222   222333333333333322    22


Q ss_pred             HHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccc
Q psy11734        315 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGM  394 (817)
Q Consensus       315 ~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (817)
                      ...+...+......++..|   ++..++.+....++..+++.+.|.+.|..                             
T Consensus       319 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~G~l~~~~-----------------------------  366 (402)
T PRK11902        319 MGTAAFVALLMALCNRSFS---ATQYALLSALASVGRVYVGPTSGYLVEAY-----------------------------  366 (402)
T ss_pred             HHHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------------
Confidence            2233334434445555444   33445555555666665666888888876                             


Q ss_pred             cccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734        395 VAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG  434 (817)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~  434 (817)
                                      ||+..|.+.+++.+++.++....+
T Consensus       367 ----------------G~~~~f~~~~~~~~~~~~~~~~~~  390 (402)
T PRK11902        367 ----------------GWPGFYLMTVVIALPGLALLWLMR  390 (402)
T ss_pred             ----------------ChHHHHHHHHHHHHHHHHHHHHHh
Confidence                            699999999988888776664443

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.71  E-value=1.4e-14  Score=162.53  Aligned_cols=358  Identities=17%  Similarity=0.107  Sum_probs=248.8

Q ss_pred             chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-CCChhHHHHHHHHHHHHhhhc
Q psy11734        242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      ++......+...+..++.|.++|+-++||.         ++.....+..++...+.+. ++++....++..++..+....
T Consensus        73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~---------~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~  143 (477)
T PF11700_consen   73 LYANSISGLLQALLAPFLGAIADYGGRRKR---------FLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEAS  143 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcccccchH---------HHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence            355667778888999999999999888875         3444444545555555554 334666666666677777777


Q ss_pred             cccccccccccCC-Cch--------------------------hHHHHHHHhhhhhcccccccccceecccccccCCCCC
Q psy11734        321 YASIRVNPIDLSP-NFS--------------------------GTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDL  373 (817)
Q Consensus       321 ~~~~~~~~~~~~p-~~~--------------------------g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~  373 (817)
                      ....+++..++.+ +.+                          ++.++.-...+++|+.+.-.+.-.+....++.     
T Consensus       144 ~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~-----  218 (477)
T PF11700_consen  144 NVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST-----  218 (477)
T ss_pred             HHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc-----
Confidence            7777888877665 445                          78888888888888877666544433322110     


Q ss_pred             CCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHH
Q psy11734        374 SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLG  453 (817)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  453 (817)
                                                      +....+.|.++.+.++-.++-.+..+++.|+++++...+..+      
T Consensus       219 --------------------------------~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~------  260 (477)
T PF11700_consen  219 --------------------------------ASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGS------  260 (477)
T ss_pred             --------------------------------cccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcch------
Confidence                                            011235677777777766654444444444443321111000      


Q ss_pred             HHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHH
Q psy11734        454 IMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYG  533 (817)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~  533 (817)
                                                                                       +.             
T Consensus       261 -----------------------------------------------------------------~~-------------  262 (477)
T PF11700_consen  261 -----------------------------------------------------------------SY-------------  262 (477)
T ss_pred             -----------------------------------------------------------------hH-------------
Confidence                                                                             00             


Q ss_pred             HHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHH
Q psy11734        534 YILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEV  613 (817)
Q Consensus       534 ~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~  613 (817)
                                                      +..++.+                   ....++++.|+|+....+++++
T Consensus       263 --------------------------------~~~g~~~-------------------l~~t~k~~~~~~~~~~fLia~~  291 (477)
T PF11700_consen  263 --------------------------------LRFGFKR-------------------LWRTFKEIRKLRQLFLFLIAYF  291 (477)
T ss_pred             --------------------------------HHHHHHH-------------------HHHHHHHHHhChHHHHHHHHHH
Confidence                                            0000100                   0134567778899999999999


Q ss_pred             HHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--cccccchhhHHHHHHHHHHH-H
Q psy11734        614 GHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVR--DILSRTNVRKVFATLGAVLP-G  690 (817)
Q Consensus       614 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~--~~~~~~~~r~~~~~~~~~~~-~  690 (817)
                      +++-+..++......|.++++|++..+...+.....+.+++|.++.|++.||+|.|  +++          ..+.++. .
T Consensus       292 l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l----------~~~l~~~~~  361 (477)
T PF11700_consen  292 LYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTL----------LISLILWII  361 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH----------HHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999988  432          1222222 2


Q ss_pred             HHHHHHH-h-----hcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734        691 VGALAAS-Y-----VGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  763 (817)
Q Consensus       691 ~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~  763 (817)
                      +++..+. +     ...+.+...+...+.+.+.+..++..-+...++.| ++.+.-.|+.+..+...+.+||.+.|.+.|
T Consensus       362 i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~  441 (477)
T PF11700_consen  362 IPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITD  441 (477)
T ss_pred             HHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222221 1     12345666666667777777777777788888887 778999999999999999999999999999


Q ss_pred             CCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734        764 NKTLLEWRVVFWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       764 ~~g~~~~~~~~~~~~~~~~i~~~~~~~~~  792 (817)
                      .+++  .|..+..+.++.+++.++.....
T Consensus       442 ~tg~--~r~g~~~l~~lf~~gl~ll~~v~  468 (477)
T PF11700_consen  442 ATGS--QRYGFLFLLVLFLIGLILLFFVD  468 (477)
T ss_pred             HhCC--chhHHHHHHHHHHHHHHHHhhcc
Confidence            9854  78899999999999988887663

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>TIGR00901 2A0125 AmpG-related permease

Probab=99.71  E-value=5.4e-17  Score=178.21  Aligned_cols=241  Identities=14%  Similarity=0.106  Sum_probs=173.5

Q ss_pred             cccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccC--------cchhHHHHhhhHHHH
Q psy11734          4 MSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTAS--------WANVFYIFGAIAVLW   75 (817)
Q Consensus         4 l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~g--------Wr~~f~i~~~~~~i~   75 (817)
                      +.+++.+...+...+++.|++|+|||+++.++...+..+|.++++.+++.+.+ ..|        ||.+|++.++..++.
T Consensus        92 ~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~-~~g~~~~~~~~wr~~f~i~ai~~l~~  170 (356)
T TIGR00901        92 LIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLAS-PEFANTGLITLWGYIFFWTALLILPG  170 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhh-hcccccccccccHHHHHHHHHHHHHH
Confidence            44555666678888999999999999999999999999999999999999998 777        999999998877775


Q ss_pred             HhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchh
Q psy11734         76 FAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLG  155 (817)
Q Consensus        76 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (817)
                      .+..++..||++++++. ++++..+                                                       
T Consensus       171 ~~~~~~~~~e~~~~~~~-~~~~~~~-------------------------------------------------------  194 (356)
T TIGR00901       171 LLVTLFLAKEPQEDASV-PKPLTQA-------------------------------------------------------  194 (356)
T ss_pred             HHHHHHhccCCCccccc-chhHHHH-------------------------------------------------------
Confidence            55555445553221110 0000000                                                       


Q ss_pred             HHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchh---HHHHHHHHHHHHHHHHHHhhchhhHHHH
Q psy11734        156 LGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLP---VWSLIISEVGHDYGLYLISTDLPKYMSE  232 (817)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~i~~~~~~~~~~~~~~~~p~~l~~  232 (817)
                                                          .++++++++|+|.   ++...+..++.....+....+.|.|+++
T Consensus       195 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  238 (356)
T TIGR00901       195 ------------------------------------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD  238 (356)
T ss_pred             ------------------------------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                0224667788876   7777777777788888889999999998


Q ss_pred             hhCCcccccchhhhhhH-HHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC----------C
Q psy11734        233 VIGLSVAENGVLSALPF-LIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG----------C  301 (817)
Q Consensus       233 ~~g~s~~~ag~~~~~~~-i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~  301 (817)
                       +|++..+.+.+....+ ++.+++.+++|++.||+++|+.          +..+.++.++......+..          +
T Consensus       239 -~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (356)
T TIGR00901       239 -MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA----------LLLFGIVQALTNAGFVWLASNGHHDGITFP  307 (356)
T ss_pred             -cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH----------HHHHHHHHHHHHHHHHHHHhcCcccccccc
Confidence             8999999998877665 6788999999999999998875          4555555554444333221          1


Q ss_pred             ChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhh
Q psy11734        302 NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC  348 (817)
Q Consensus       302 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~  348 (817)
                      +.+.......+..++.+...+.......+..| +++|+.+|+.+...+
T Consensus       308 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       308 HLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             hHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence            22334444444456666666777777777555 899999999988765

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.71  E-value=1.5e-16  Score=177.16  Aligned_cols=257  Identities=15%  Similarity=0.159  Sum_probs=186.5

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...+....+..|++++++|+++.++...+..+|..++|.+++.+.+ ..|||+.|++.+.+.++..+...
T Consensus       102 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-~~g~~~~f~~~~~~~~~~~~~~~  180 (394)
T PRK11652        102 ASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT-LFGWRACYLFLLLLGAGVTFSMA  180 (394)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccChHHHHHHHHHHHHHHHHHHH
Confidence            37899999998888888999999999999999999999999999999999999998 88999999998877776666555


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      ++.||+|++++   +++.                                                              
T Consensus       181 ~~~~~~~~~~~---~~~~--------------------------------------------------------------  195 (394)
T PRK11652        181 RWMPETRPADA---RRTR--------------------------------------------------------------  195 (394)
T ss_pred             HhCCccCcccc---chhH--------------------------------------------------------------
Confidence            55555432111   0000                                                              


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                     .+.++++++|||.++...+..+........+..+.|.++++.+|+++.+
T Consensus       196 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  244 (394)
T PRK11652        196 -------------------------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMT  244 (394)
T ss_pred             -------------------------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHH
Confidence                                           0123567788888876666666666666666777888999888999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-CCChhHHHHHHHHHHHHhhh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~g~  319 (817)
                      .++......++.++++++.+++.||.+++..         ..........+.+...... ..+.+.......+.+.+.+.
T Consensus       245 ~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  315 (394)
T PRK11652        245 VSILFILPIPAAFFGAWFAGRPNKRFSTLMW---------QSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGM  315 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence            9998888888899999999999999884322         1112222222222222111 11333344444445555566


Q ss_pred             ccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecc
Q psy11734        320 CYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  363 (817)
Q Consensus       320 ~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~  363 (817)
                      ..+.......+..|+++|++.++.+....+|+++++.+.+.+.+
T Consensus       316 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~  359 (394)
T PRK11652        316 LFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQ  359 (394)
T ss_pred             HHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            66666666777778899999999999999999999998876543

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.71  E-value=3.3e-14  Score=159.06  Aligned_cols=178  Identities=15%  Similarity=0.223  Sum_probs=137.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH-hhcCcccchhhHHH
Q psy11734        202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF-IARDILSRTNVRKV  280 (817)
Q Consensus       202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-g~r~~~~~~~~~~~  280 (817)
                      .+.++..+...+.....+|++..++|.|+++.+|++..+++.+.........++.+++|+++||+ |||+.         
T Consensus         8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~---------   78 (493)
T PRK15462          8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA---------   78 (493)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH---------
Confidence            34577778888888999999999999999998999999999999999999999999999999999 99986         


Q ss_pred             HHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-C--chhHHHHHHHhhhhhcccccccc
Q psy11734        281 FATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-N--FSGTIMALSNGLGCVSGMVAPLT  357 (817)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~--~~g~a~g~~~~~~~lg~~~~~~i  357 (817)
                       +..+.++..++.+.+.....+.......+.+...+.+...+...+...|..| +  +|.+++++.+...++|+.++|.+
T Consensus        79 -iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l  157 (493)
T PRK15462         79 -VMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA  157 (493)
T ss_pred             -HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence             6777777776655554322222222333333334455555656667777666 3  59999999999999999999999


Q ss_pred             cceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734        358 VGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG  434 (817)
Q Consensus       358 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~  434 (817)
                      .+.+.++.                                             +|+..|.+.++.++++.+.+++..
T Consensus       158 ~g~L~~~~---------------------------------------------Gw~~~F~iaaigm~l~li~~~~~~  189 (493)
T PRK15462        158 CGYAQEEY---------------------------------------------SWAMGFGLAAVGMIAGLVIFLCGN  189 (493)
T ss_pred             HHHHHhhh---------------------------------------------ChHHHHHHHHHHHHHHHHHHHHhh
Confidence            99887654                                             699999998877777776665433

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.71  E-value=2e-15  Score=167.40  Aligned_cols=272  Identities=13%  Similarity=0.141  Sum_probs=176.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734        202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF  281 (817)
Q Consensus       202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~  281 (817)
                      ++.++......++...........+|.+.++ +|.|..+.|++.....++..+++++.|+++||+|||+.          
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~----------   73 (381)
T PRK03633          5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRS----------   73 (381)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH----------
Confidence            4557788888888888888888999999987 69999999999999999999999999999999999986          


Q ss_pred             HHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcccccc-ccccccCCCchhHHHHHHHhhhhhcccccccccce
Q psy11734        282 ATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIR-VNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGF  360 (817)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~  360 (817)
                      ...+..+..++.....+.+ +.+...+...+.+.+.+...+... ....+.++++|+++++..+....+|..+||.+.+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~  152 (381)
T PRK03633         74 YYLASLIFAAGCAGLGLMV-GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK  152 (381)
T ss_pred             HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            6666776666666655544 554444444454555544444432 33344556899999999999999999999999888


Q ss_pred             ecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734        361 LTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY  440 (817)
Q Consensus       361 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~  440 (817)
                      +.+....                                         ...|...+...    .+..++.....++++++
T Consensus       153 l~~~~~~-----------------------------------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  187 (381)
T PRK03633        153 VSTELMS-----------------------------------------VLPWVTGLVLA----AILPLLFTRILNQQAEN  187 (381)
T ss_pred             ccccccc-----------------------------------------hHHHHHHHHHH----HHHHHHHhcccCCCCCC
Confidence            7654210                                         00232221111    11111111111111111


Q ss_pred             cc-CC----CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccc
Q psy11734        441 WN-ES----ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAK  515 (817)
Q Consensus       441 ~~-~~----~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (817)
                      .+ ++    .++.+++.....++.......   ......|...+                                   +
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lp~~~~-----------------------------------~  229 (381)
T PRK03633        188 HDSTSIWPMLKLRQARLGVNGCIISGIVLG---SLYGLMPLYLN-----------------------------------H  229 (381)
T ss_pred             CCCCCHHHHHHhcchHHHHHHHHHHHHHHH---HHHHHHHHHHH-----------------------------------H
Confidence            00 01    011111111111111111111   11112344444                                   6


Q ss_pred             ccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHH
Q psy11734        516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLT  568 (817)
Q Consensus       516 ~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~  568 (817)
                      .|.++++.+++.+.+.++..+++++.|++.||+|+|+++..+..+.+++.+..
T Consensus       230 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~  282 (381)
T PRK03633        230 QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM  282 (381)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence            68899999999999999999999999999999999999988888777765443

>TIGR01272 gluP glucose/galactose transporter

Probab=99.70  E-value=1.3e-16  Score=170.74  Aligned_cols=257  Identities=14%  Similarity=0.081  Sum_probs=190.4

Q ss_pred             ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccc---------------ccCcchhHHH
Q psy11734          3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSF---------------TASWANVFYI   67 (817)
Q Consensus         3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~---------------~~gWr~~f~i   67 (817)
                      ++.|.|.+...+.++.++++..|+|++.+.+++.++..++|..++|.+++.++..               ..+||++|++
T Consensus        18 f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~   97 (310)
T TIGR01272        18 FVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLL   97 (310)
T ss_pred             HHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999999999999988730               1479999998


Q ss_pred             HhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccc
Q psy11734         68 FGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQK  147 (817)
Q Consensus        68 ~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (817)
                      .+.+.+++.+++.+. + .||.++.  ++++.      ..    ++                                  
T Consensus        98 ia~~~~~~~i~~~~~-~-~p~~~~~--~~~~~------~~----~~----------------------------------  129 (310)
T TIGR01272        98 LAGALAVLAIIFAFL-P-LPELQEA--DVARV------SS----GD----------------------------------  129 (310)
T ss_pred             HHHHHHHHHHHHHHc-c-CCCCCcc--ccccc------cc----cc----------------------------------
Confidence            776655555443332 2 2322110  00000      00    00                                  


Q ss_pred             cCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchh
Q psy11734        148 FGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLP  227 (817)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p  227 (817)
                                                                   ....++++|+|.++...+..++..+.-.++..|.+
T Consensus       130 ---------------------------------------------~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~  164 (310)
T TIGR01272       130 ---------------------------------------------TTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLV  164 (310)
T ss_pred             ---------------------------------------------ccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                         00123567889999988888888888999999999


Q ss_pred             hHHHHh--hCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhH
Q psy11734        228 KYMSEV--IGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSM  305 (817)
Q Consensus       228 ~~l~~~--~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (817)
                      .|+.+.  +|+++.+++........++.+|+++++++.||+++|+.          +..+..+..++..+....+ +.. 
T Consensus       165 ~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~----------l~~~~~l~~~~~~l~~~~~-~~~-  232 (310)
T TIGR01272       165 NFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY----------LAFNAFLAVLLSIGAALTH-GYV-  232 (310)
T ss_pred             HHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH----------HHHHHHHHHHHHHHHHHcC-CHH-
Confidence            999864  58999999999999999999999999999999998875          4455555555444443333 222 


Q ss_pred             HHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        306 VAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       306 ~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ....+.+.+++.+..+|.......+..|++.+++.++. .+..+|+++.|.+.|.+.|..
T Consensus       233 ~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~  291 (310)
T TIGR01272       233 AMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCL  291 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhc
Confidence            22334455667777778777777676677777788875 678899999999999999875

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>KOG0252|consensus

Probab=99.70  E-value=3e-17  Score=172.63  Aligned_cols=308  Identities=16%  Similarity=0.132  Sum_probs=227.9

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734        447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI  526 (817)
Q Consensus       447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~  526 (817)
                      .+....+++.-.+++.+.+|..+++...|-+..                           .++.....+=|.++...+.+
T Consensus        37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~---------------------------lY~~~~~~~g~~ps~i~~~V   89 (538)
T KOG0252|consen   37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGY---------------------------LYYHGDESGGHYPSGVLALV   89 (538)
T ss_pred             HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHH---------------------------HhcCCCCCCCcCCchHHHHH
Confidence            345566778888999999999999998877765                           11222222334567778889


Q ss_pred             HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcc-----hHHHHHHHHHHhhhcc----------
Q psy11734        527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSG-----PVSMTVLRFLEGVGED----------  591 (817)
Q Consensus       527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s-----~~~l~~~R~l~Gig~~----------  591 (817)
                      ..+-.+|.++||+++|+++||+|||+++...+++..++++++++....+     .+.|.+.|++.|+|.|          
T Consensus        90 n~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~  169 (538)
T KOG0252|consen   90 NAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIM  169 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHh
Confidence            9999999999999999999999999999999999999999888875112     4569999999999999          


Q ss_pred             -----------------------------------------------------------------------------cCc
Q psy11734        592 -----------------------------------------------------------------------------LET  594 (817)
Q Consensus       592 -----------------------------------------------------------------------------~~~  594 (817)
                                                                                                   ...
T Consensus       170 SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~  249 (538)
T KOG0252|consen  170 SESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETA  249 (538)
T ss_pred             hhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch
Confidence                                                                                         000


Q ss_pred             h-------------------------------------------hHHhh---cCHhHHHHHHHHHHHHHHHHHHHhhHHH
Q psy11734        595 P-------------------------------------------WAAIL---SSLPVWSLIISEVGHDYGFYLISSDLPK  628 (817)
Q Consensus       595 ~-------------------------------------------~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~p~  628 (817)
                      +                                           +.+.+   .-+++...+..+|....++|+...+...
T Consensus       250 ~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~  329 (538)
T KOG0252|consen  250 RYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSV  329 (538)
T ss_pred             hHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHH
Confidence            0                                           11111   1256677788899999999999999999


Q ss_pred             HHHHHhCCChhHHHH--------HHHHHH-HHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy11734        629 YMSQVIGLSVAENGV--------LSALPF-LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV  699 (817)
Q Consensus       629 ~l~~~~g~s~~~~~~--------~~~~~~-~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~  699 (817)
                      .+++ .|+.+...-.        ...+.. ...++|..+...++|++|||.          ..+.+++++.+..+.+...
T Consensus       330 I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~----------iq~~GF~~~~i~~~~~~~~  398 (538)
T KOG0252|consen  330 IFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKY----------IQLMGFFIMTIFFFVIAGP  398 (538)
T ss_pred             HHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHH----------HHHhhHHHHHHHHHHHcCC
Confidence            8886 3554432222        222222 333447778888999999765          4468888888877777654


Q ss_pred             cC---chHHHHHHHHHHHHHHh-hhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc-----CCcccc
Q psy11734        700 GC---NTSMVAICFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ-----NKTLLE  769 (817)
Q Consensus       700 ~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~-----~~g~~~  769 (817)
                      .+   +.....++..+..++.. ........+.+|.+| +.|++..|+....+..|++++.....++.+     ..+   
T Consensus       399 y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g---  475 (538)
T KOG0252|consen  399 YNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIG---  475 (538)
T ss_pred             cccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcccc---
Confidence            32   12233334444333333 445555688899999 889999999999999999999999999999     444   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734        770 WRVVFWIMFLTLFISNVFFVLFGSGE  795 (817)
Q Consensus       770 ~~~~~~~~~~~~~i~~~~~~~~~~~~  795 (817)
                      .+..+++.+++++++.+..+++...+
T Consensus       476 ~~~v~~i~~~~~~~gi~~T~l~pEtk  501 (538)
T KOG0252|consen  476 VRNVFIILAGCMLLGILFTLLIPETK  501 (538)
T ss_pred             chHHHHHHHHHHHHhHheeEEeeccc
Confidence            78999999999999999999887433

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.70  E-value=4e-17  Score=187.81  Aligned_cols=303  Identities=10%  Similarity=0.101  Sum_probs=174.0

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.+...+....++.|++|+|+|+++.++...+..+|..+++.+.+.+.+ ..|||+.|++..+..+ ..++..
T Consensus       114 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~w~~~f~~~~~~~~-~~~~~~  191 (496)
T PRK03893        114 ARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP-VWGWRALFFIGILPII-FALWLR  191 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHH-HHHHHH
Confidence            37899999999999999999999999999999999999999999999999999999 9999999997543322 222222


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      ...|+   ++++.++++......+...      .  ...                             .+++........
T Consensus       192 ~~~p~---~~~~~~~~~~~~~~~~~~~------~--~~~-----------------------------~~~~~~~~~~~~  231 (496)
T PRK03893        192 KNLPE---AEDWKEKHAGKAPVRTMVD------I--LYR-----------------------------GEHRIINILLTL  231 (496)
T ss_pred             HhCCC---chhhhhhccccccchhHHH------H--Hhc-----------------------------chhHHHHHHHHH
Confidence            22233   2211000000000000000      0  000                             000000000000


Q ss_pred             HHHHHhhhhcc--cCcCCch---------hhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhH
Q psy11734        161 TALLTLLTPLV--AHSGPVS---------MTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKY  229 (817)
Q Consensus       161 ~~~~~~~~~~~--~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~  229 (817)
                      ...........  ....+..         .+.....+...          .+.+......+..+......+....++|.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~  301 (496)
T PRK03893        232 AAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSG----------KRWPTGVMLMVVVLFAFLYSWPIQALLPTY  301 (496)
T ss_pred             HHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcc----------cchhHHHHHHHHHHHHHhccchHHHHHHHH
Confidence            00000000000  0000000         00000000000          011222223333333333334567889999


Q ss_pred             HHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhH-HHH
Q psy11734        230 MSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSM-VAI  308 (817)
Q Consensus       230 l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  308 (817)
                      +++.+|++..+++.+..+..++..++++++|+++||+++|+.          ...+..+..+....+....+.... ...
T Consensus       302 l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (496)
T PRK03893        302 LKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKA----------YVCSLLISQLLIIPVFAIGGANVWVLGL  371 (496)
T ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH----------HHHHHHHHHHHHHHHhhccccHHHHHHH
Confidence            987789999999999999999999999999999999998875          444444444433333222222222 222


Q ss_pred             HHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ......+......+.......+..| +++|+++|+.+....+|+.++|.+.|.+.|+.
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~  429 (496)
T PRK03893        372 LLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL  429 (496)
T ss_pred             HHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC
Confidence            2222122222223334555666555 78999999999999999999999999998875

>KOG0569|consensus

Probab=99.70  E-value=1.1e-15  Score=168.16  Aligned_cols=260  Identities=16%  Similarity=0.149  Sum_probs=193.2

Q ss_pred             HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHHHHHhhhcc----------
Q psy11734        523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA-HSGPVSMTVLRFLEGVGED----------  591 (817)
Q Consensus       523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~-~~s~~~l~~~R~l~Gig~~----------  591 (817)
                      .+.+.+.+.+|.++|+...|.++||+|||..+.++.++..++.++..++. ..+++++.++|++.|+..+          
T Consensus        62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl  141 (485)
T KOG0569|consen   62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL  141 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            57779999999999999999999999999999999998888888887764 2388999999999999998          


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A  221 (485)
T KOG0569|consen  142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEA  221 (485)
T ss_pred             hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHH
Confidence                                                                                            


Q ss_pred             --------------------------------cCchhHHhhcCHhH-----HHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q psy11734        592 --------------------------------LETPWAAILSSLPV-----WSLIISEVGHDYGFYLISSDLPKYMSQVI  634 (817)
Q Consensus       592 --------------------------------~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~l~~~~  634 (817)
                                                      ...++++++++|..     ..+.+.......+.+....|...++++ .
T Consensus       222 ~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-a  300 (485)
T KOG0569|consen  222 RKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-A  300 (485)
T ss_pred             HHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-c
Confidence                                            11235677876543     223333344444566666777777777 5


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhc----Cc-hHHH---
Q psy11734        635 GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVG----CN-TSMV---  706 (817)
Q Consensus       635 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~---  706 (817)
                      |+++.++.+.....++...+.++.+.++.||.|||..+          +.+..++.++.+++....    .. .|..   
T Consensus       301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLl----------l~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~  370 (485)
T KOG0569|consen  301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLL----------LISLSLMAVALLLMSIALFLSNSFGSWLSYLC  370 (485)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            99999999999999999999999999999999988654          455555555444443221    11 2222   


Q ss_pred             HHHHHHHHHHHh-hhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHH
Q psy11734        707 AICFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFIS  784 (817)
Q Consensus       707 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~  784 (817)
                      +...+...+..+ ...|..+-..+|.+| +.|.+++++...+..+..++-......+.+..|.    ..|+...+.+++.
T Consensus       371 i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~----~~filF~i~~~~~  446 (485)
T KOG0569|consen  371 IAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP----YVFILFVIPLAIF  446 (485)
T ss_pred             HHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----hhhHHHHHHHHHH
Confidence            233333333333 345666788999998 7799999999999999999999999999888862    5667777777777


Q ss_pred             HHHHHHhccCccc
Q psy11734        785 NVFFVLFGSGEVQ  797 (817)
Q Consensus       785 ~~~~~~~~~~~~~  797 (817)
                      .+..++..++.|.
T Consensus       447 ~i~~~~~lPETkg  459 (485)
T KOG0569|consen  447 LIYLYRYLPETKG  459 (485)
T ss_pred             HHHHHHhCcccCC
Confidence            7777766555443

>PRK09669 putative symporter YagG; Provisional

Probab=99.70  E-value=1.8e-15  Score=171.23  Aligned_cols=353  Identities=10%  Similarity=-0.013  Sum_probs=223.6

Q ss_pred             HHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH----hhcCcccchhhHHHHHHHHhHH
Q psy11734        213 VGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF----IARDILSRTNVRKVFATLGAVL  288 (817)
Q Consensus       213 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~----g~r~~~~~~~~~~~~~~~~~~~  288 (817)
                      +..+.....+..+++.|+++++|.|+.++|.+.....+...+..++.|+++||.    ||||.         .+..+...
T Consensus        19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp---------~il~~~~~   89 (444)
T PRK09669         19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRP---------YLLWFAIP   89 (444)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcch---------hHHHHHHH
Confidence            344445566678899999999999999999999999999999999999999994    44443         46666565


Q ss_pred             HHHHHHhhhccCC---C--hhHHHHHHHHHHHHhhhccccccccccccC--CCchhHHHHHHHhhhhhccccccccccee
Q psy11734        289 PGVGALAASYVGC---N--TSMVAIFFTIGMAFMGFCYASIRVNPIDLS--PNFSGTIMALSNGLGCVSGMVAPLTVGFL  361 (817)
Q Consensus       289 ~~~~~~~~~~~~~---~--~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--p~~~g~a~g~~~~~~~lg~~~~~~i~g~l  361 (817)
                      .++++.++...++   .  ..+..+...+...+.........+...|..  +++|.+..+.......+|+.+++.+...+
T Consensus        90 ~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl  169 (444)
T PRK09669         90 FGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPL  169 (444)
T ss_pred             HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555544443332   1  122222222222233333333455555644  37899999999999998888887765554


Q ss_pred             cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccc
Q psy11734        362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYW  441 (817)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~  441 (817)
                      ....+.                                      .....+|+..+.+.+++.++...+..+..|++.++.
T Consensus       170 ~~~~~~--------------------------------------~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~  211 (444)
T PRK09669        170 VDILGK--------------------------------------GDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPE  211 (444)
T ss_pred             HHHhCC--------------------------------------CchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCC
Confidence            443220                                      001237888888887777666555444433322110


Q ss_pred             cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734        442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER  521 (817)
Q Consensus       442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  521 (817)
                      +++                                                                      +-     
T Consensus       212 ~~~----------------------------------------------------------------------~~-----  216 (444)
T PRK09669        212 VDN----------------------------------------------------------------------SS-----  216 (444)
T ss_pred             CcC----------------------------------------------------------------------CC-----
Confidence            000                                                                      00     


Q ss_pred             hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734        522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS  601 (817)
Q Consensus       522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~  601 (817)
                                                                           +                ..+++++++|
T Consensus       217 -----------------------------------------------------~----------------~~~~~~~~~~  227 (444)
T PRK09669        217 -----------------------------------------------------S----------------VWKDLKLLLG  227 (444)
T ss_pred             -----------------------------------------------------C----------------HHHHHHHHhC
Confidence                                                                 0                0123567788


Q ss_pred             CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734        602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF  681 (817)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~  681 (817)
                      ||+++.+....++............+.|.+...+ +++..+.+.....+..+++.++.++++||+|+|+..         
T Consensus       228 n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~---------  297 (444)
T PRK09669        228 NSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAF---------  297 (444)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH---------
Confidence            9998888777776666665555545544444433 333444555566688889999999999999987653         


Q ss_pred             HHHHHHHHHHHHHHHHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHHHHHHHh
Q psy11734        682 ATLGAVLPGVGALAASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGLGCVSGM  752 (817)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~  752 (817)
                       ..+..+..++.+.+... +.+.+...+..++.+.+.+...+..++...|..+        +..|...|..++...+|..
T Consensus       298 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~a  376 (444)
T PRK09669        298 -KWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLA  376 (444)
T ss_pred             -HHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHH
Confidence             23333333222222222 2244445555556666666666777777776542        3467889999999999999


Q ss_pred             HHHHHHHHhhcCCcc
Q psy11734        753 VAPLTVGFLTQNKTL  767 (817)
Q Consensus       753 i~p~~~g~~~~~~g~  767 (817)
                      ++|.+.|.+.+..|.
T Consensus       377 lg~~i~g~ll~~~Gy  391 (444)
T PRK09669        377 IGGAVVGWILAWVDY  391 (444)
T ss_pred             HHHHHHHHHHHHcCC
Confidence            999999999987653

>PRK09848 glucuronide transporter; Provisional

Probab=99.70  E-value=9.2e-16  Score=173.89  Aligned_cols=161  Identities=11%  Similarity=0.076  Sum_probs=119.3

Q ss_pred             hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy11734        596 WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRT  675 (817)
Q Consensus       596 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~  675 (817)
                      +++++|||+++...+..++............|.|+++.+|.+....+.......++.+++.++.+++.||+++|+.+   
T Consensus       221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~---  297 (448)
T PRK09848        221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF---  297 (448)
T ss_pred             HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---
Confidence            56788999999998888888888888888889999988888776665555555677888999999999999987653   


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcC-chHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHH
Q psy11734        676 NVRKVFATLGAVLPGVGALAASYVGC-NTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGL  746 (817)
Q Consensus       676 ~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~  746 (817)
                             ..+..+..++.+.+.+.+. +.+.......+.+.+.+...+..++...|..+        +..|...|+.+..
T Consensus       298 -------~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~  370 (448)
T PRK09848        298 -------LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFT  370 (448)
T ss_pred             -------HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHH
Confidence                   3555555555555544332 33444444445555556666666666666554        2469999999999


Q ss_pred             HHHHHhHHHHHHHHhhcCCc
Q psy11734        747 GCVSGMVAPLTVGFLTQNKT  766 (817)
Q Consensus       747 ~~~g~~i~p~~~g~~~~~~g  766 (817)
                      ..+|..+++.+.|.+.+..|
T Consensus       371 ~klg~aig~~i~g~~l~~~G  390 (448)
T PRK09848        371 RKCGQAIGGSIPAFILGLSG  390 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHcC
Confidence            99999999999998887654

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.70  E-value=8e-15  Score=161.41  Aligned_cols=185  Identities=17%  Similarity=0.187  Sum_probs=138.1

Q ss_pred             HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccch
Q psy11734        597 AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTN  676 (817)
Q Consensus       597 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~  676 (817)
                      .+++|+|++....+..++..........+.+.|+++.-|.+....+...++..+..++.-...+++..|+|.++++    
T Consensus       201 ~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll----  276 (400)
T PF03825_consen  201 LKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLL----  276 (400)
T ss_pred             HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH----
Confidence            4789999999888888988889999999999999995337778888888888889999999999999999987653    


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHH----HHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHH-HHH
Q psy11734        677 VRKVFATLGAVLPGVGALAASYVGCNTSMVAICFT----IGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLG-CVS  750 (817)
Q Consensus       677 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~-~~g  750 (817)
                            .++.+..++=..++.+..++.+.......    +-+...+..+.....+..+..| +.|+++.++.+... .+|
T Consensus       277 ------~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg  350 (400)
T PF03825_consen  277 ------LLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLG  350 (400)
T ss_pred             ------HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHH
Confidence                  46666666655555555323333333333    3455555666666677888887 77999999988765 589


Q ss_pred             HhHHHHHHHHhhcCCccc---cHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        751 GMVAPLTVGFLTQNKTLL---EWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       751 ~~i~p~~~g~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      ..++..+.|++.|+.|.+   .|...+.+.+++.++..+.+++.
T Consensus       351 ~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~  394 (400)
T PF03825_consen  351 GAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL  394 (400)
T ss_pred             HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999987633   25556666666666666555554

>PRK10054 putative transporter; Provisional

Probab=99.70  E-value=3.5e-17  Score=182.02  Aligned_cols=255  Identities=11%  Similarity=0.088  Sum_probs=179.5

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |.+.|.+.+...|...+...|.+|+|+|+++.|+.....++|.++||++++++.+  .|||++|++.+.+.++..++..+
T Consensus       103 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--~g~~~~f~~~~~~~~i~~i~~~~  180 (395)
T PRK10054        103 FALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINLPFWLAAICSAFPLVFIQI  180 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcHHHHHHHHHHHHHHHHHH
Confidence            4556666666778888999999999999999999999999999999999998876  68999999988777766555555


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      ++|+++++++   +++.        +                                                      
T Consensus       181 ~~~~~~~~~~---~~~~--------~------------------------------------------------------  195 (395)
T PRK10054        181 WVQRSEKAIA---TETG--------S------------------------------------------------------  195 (395)
T ss_pred             HHhccccccc---cchh--------h------------------------------------------------------
Confidence            5544321110   0000        0                                                      


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHh--hCCccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEV--IGLSVA  239 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~  239 (817)
                                                     ....++++|||+++...+..++..........+.+.|..+.  .+.+..
T Consensus       196 -------------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (395)
T PRK10054        196 -------------------------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEK  244 (395)
T ss_pred             -------------------------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHH
Confidence                                           00124678899998888888877777777777888887653  344555


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~  319 (817)
                      ..+.......+......+..|++.||.++|+.          ...+..+..++...+....++.+...+...+.+.+.+.
T Consensus       245 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  314 (395)
T PRK10054        245 VVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL----------MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEII  314 (395)
T ss_pred             HHHHHHHhhhhheeeehhHHHHHHccCCchhH----------HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHH
Confidence            66777666767777777888999999988875          55666666665555544333443333344444444444


Q ss_pred             ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ..+.....+.+..| +.+++..+..+ ...+|.++||.+.|.+.|+.
T Consensus       315 ~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~  360 (395)
T PRK10054        315 YAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL  360 (395)
T ss_pred             HHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc
Confidence            44555556666555 78899988765 67789999999999999986

>KOG2504|consensus

Probab=99.69  E-value=5.7e-17  Score=182.70  Aligned_cols=331  Identities=16%  Similarity=0.182  Sum_probs=235.0

Q ss_pred             ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhhe
Q psy11734          3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCIL   82 (817)
Q Consensus         3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~   82 (817)
                      ++.|+|.|..+..+..++..|| +|+|+.|.|+..++.++|..+-|++...+.+ ..|||+.+++.+.+.+-..+....+
T Consensus       143 vi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~-~~G~r~~~l~~~~~~l~~~~~~~~~  220 (509)
T KOG2504|consen  143 VIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLS-KYGWRGALLIFGGISLNVLVAGALL  220 (509)
T ss_pred             HHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHc
Confidence            4679999999999999999999 8999999999999999999999999999999 9999999999998888888888777


Q ss_pred             eccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHH
Q psy11734         83 CFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTA  162 (817)
Q Consensus        83 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (817)
                      .|..++..+. .+++.+......+......+.+..-++....-        .   ....-....+-.++           
T Consensus       221 rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~-----------  277 (509)
T KOG2504|consen  221 RPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKK--------L---SLSNLATLKRGPDK-----------  277 (509)
T ss_pred             CCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCc--------c---cccchhhhhhCCcc-----------
Confidence            7654443322 11100000000000000000000000000000        0   00000000000000           


Q ss_pred             HHHhhhhcccCcCCchhhhHHhhhccCcccC--chHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        163 LLTLLTPLVAHSGPVSMTVLRFLEGVGEDLK--TPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                            ......+..  .-+++++|+|.++...+...+...+++....++|.|..+ +|++..+
T Consensus       278 ----------------------~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~  334 (509)
T KOG2504|consen  278 ----------------------WRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSND  334 (509)
T ss_pred             ----------------------ccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhh
Confidence                                  000000001  114689999999999999999999999999999999995 7999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      ++.+....++...+++++.|+++|+...++.        .+..++.++.+++...+.+.. +....+....+.++..+..
T Consensus       335 aa~l~Siigi~~i~gRi~~G~laD~~~~~~~--------~~~~~~ll~~gl~~~~~p~~~-~~~~l~~~~~~fG~~~g~~  405 (509)
T KOG2504|consen  335 AAFLLSIIGVSDIIGRIILGLLADKPGIRAL--------VLFLLTLLIAGLARLFLPFAT-TYVGLIVFSILFGFCVGSF  405 (509)
T ss_pred             hHHHHHHHHHhhhhhhhhhhhhcCccccchH--------HHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999885432        245666666666665555554 5666777777777777777


Q ss_pred             cccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734        321 YASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  399 (817)
Q Consensus       321 ~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (817)
                      .........|..+ ++-..+.|+...++.++..+||++.|.+.|.++                                 
T Consensus       406 ~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg---------------------------------  452 (509)
T KOG2504|consen  406 SSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG---------------------------------  452 (509)
T ss_pred             HHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC---------------------------------
Confidence            7777767777555 899999999999999999999999999999875                                 


Q ss_pred             ccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734        400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG  434 (817)
Q Consensus       400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~  434 (817)
                                 +|...|+..++..+++..++++.+
T Consensus       453 -----------~Y~~~f~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  453 -----------NYDHAFYFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             -----------CeeeehhhcChHHHHHHHHHHHhH
Confidence                       477888888888888887776665

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.68  E-value=3.3e-17  Score=184.13  Aligned_cols=274  Identities=12%  Similarity=0.142  Sum_probs=182.7

Q ss_pred             hhhhccC--CCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHH
Q psy11734         19 LLAQWSP--PNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEK   96 (817)
Q Consensus        19 ~i~~~~p--~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~   96 (817)
                      .+.++.+  +++|++..|......++|..++|++++.+.+  .+||++|++.+.+.++..++.++..+++|++++. + +
T Consensus       127 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~--~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~  202 (420)
T PRK09528        127 AIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN--INPQINFWLGSGSALILLVLLFFAKPDAPSTAKV-A-N  202 (420)
T ss_pred             hhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh--cCchHhHHHHHHHHHHHHHHHhcccccccchhhh-c-c
Confidence            3444433  3567889999999999999999999999987  5999999998877777666665554443321110 0 0


Q ss_pred             HHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhhcccCcCC
Q psy11734         97 ERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGP  176 (817)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (817)
                      +.        +   .+++                                                              
T Consensus       203 ~~--------~---~~~~--------------------------------------------------------------  209 (420)
T PRK09528        203 AL--------G---ANAS--------------------------------------------------------------  209 (420)
T ss_pred             ch--------h---cccc--------------------------------------------------------------
Confidence            00        0   0000                                                              


Q ss_pred             chhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhh---CCcccccchhhhhhHHHHH
Q psy11734        177 VSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVI---GLSVAENGVLSALPFLIMW  253 (817)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~---g~s~~~ag~~~~~~~i~~~  253 (817)
                                   +......++++|||.++...+...+....+.....+.|.|+.+.+   +.+..+.|.+.....++..
T Consensus       210 -------------~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  276 (420)
T PRK09528        210 -------------AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEA  276 (420)
T ss_pred             -------------cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Confidence                         000123456888998876666555555555555567888877643   4565677888888889999


Q ss_pred             HHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccc-cC
Q psy11734        254 LVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPID-LS  332 (817)
Q Consensus       254 ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~  332 (817)
                      ++.+.+|+++||+++|+.          ...+..+..+......+.+ +.+.......+.+...+...+....+..+ .+
T Consensus       277 ~~~~~~g~l~dr~g~~~~----------~~~~~~l~~~~~~l~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~  345 (420)
T PRK09528        277 LIMFFAPFIINRIGAKNA----------LLLAGTIMAVRIIGSGFAT-GPLEVSILKLLHAFEVPFLLVGVFKYITLNFD  345 (420)
T ss_pred             HHHHHHHHHHHHhCcchh----------hHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999986          5566666666655555544 44433333333333333333333344444 45


Q ss_pred             CCchhHHHHH-HHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccch
Q psy11734        333 PNFSGTIMAL-SNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSE  411 (817)
Q Consensus       333 p~~~g~a~g~-~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (817)
                      ++.+++..+. .|+...+|++++|.+.|.+.|..                                             +
T Consensus       346 ~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~---------------------------------------------G  380 (420)
T PRK09528        346 VRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI---------------------------------------------G  380 (420)
T ss_pred             ccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh---------------------------------------------C
Confidence            5788888766 67888899999999999998875                                             5


Q ss_pred             hHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        412 WRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       412 ~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                      |+..|.+.+++.++..++..++.|+++
T Consensus       381 ~~~~f~~~~~~~~i~~~~~~~~~~~~~  407 (420)
T PRK09528        381 FQGTYLILGGIVLLFTLISVFTLSGDR  407 (420)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            899999988888777766665555443

>KOG3764|consensus

Probab=99.68  E-value=1.7e-16  Score=164.15  Aligned_cols=267  Identities=15%  Similarity=0.119  Sum_probs=203.1

Q ss_pred             cccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-
Q psy11734        513 DAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-  591 (817)
Q Consensus       513 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-  591 (817)
                      ..+++-+++++|++++++.+...+..|+.|.+.||+|+|..+++|+.+....+++.++.+  +++.++++|.+||+|.+ 
T Consensus        98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--sy~~l~vAR~LQgvgsA~  175 (464)
T KOG3764|consen   98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--SYPMLFVARSLQGVGSAF  175 (464)
T ss_pred             ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--hhHHHHHHHHHhhhhHHH
Confidence            346677889999999999999999999999999999999999999999999999999999  99999999999999999 


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~  255 (464)
T KOG3764|consen  176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD  255 (464)
T ss_pred             HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence                                                                                            


Q ss_pred             ---cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734        592 ---LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIV  668 (817)
Q Consensus       592 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~  668 (817)
                         +..++++++++|.++.........+...-..-..+|.++.+....+.-+.|..+....+...+|+.+.|.+.||+++
T Consensus       256 ~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~  335 (464)
T KOG3764|consen  256 STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPH  335 (464)
T ss_pred             ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCc
Confidence               22347789999999988887777777777777888998988888555588888888899999999999999999996


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHH---HHHHHHHHHHHHhhhhhhhhhhccccCC-C---chHHHHH
Q psy11734        669 RDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSM---VAICFTIGMAFMGFCYASIRVNPIDLSP-N---FSGTIMA  741 (817)
Q Consensus       669 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~g~~~g  741 (817)
                      .+++        ..+.+.+...++.....+.+ +...   ......+.+........+......|.-. +   ..|.+.+
T Consensus       336 ~~wl--------~~~~gl~~~G~~~~~iP~~~-~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVya  406 (464)
T KOG3764|consen  336 LRWL--------LSLGGLATVGVSSGPIPFAT-SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYA  406 (464)
T ss_pred             hhHH--------HHHHHHHHHHHHhchhHhhh-hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHH
Confidence            5442        22344444333333333332 2222   1122222222222222222233333322 2   5799999


Q ss_pred             HHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        742 LSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       742 ~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                      +......+|.++||.++|.+.+..|   +++...+.+...++..-++..++.
T Consensus       407 Iad~a~sla~a~GP~~gg~iv~~iG---F~wl~~iig~~n~iyapvl~ll~~  455 (464)
T KOG3764|consen  407 IADAAFSLAYAIGPTFGGSLVEAIG---FEWLMTIIGILNLIYAPVLLLLRI  455 (464)
T ss_pred             HHHHHHHHhhhccccccchheeehh---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999987   888888888888887766666543

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.68  E-value=2.1e-16  Score=184.47  Aligned_cols=197  Identities=14%  Similarity=0.174  Sum_probs=145.7

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc---------------------
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA---------------------   59 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~---------------------   59 (817)
                      .|+++|+|.+..++...+++.|++|+++|+++++++.....+|+++|+++++++.+ .+                     
T Consensus       178 ~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~-~~~d~~~~~~~~~~l~~~dprWi  256 (633)
T TIGR00805       178 SQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ-IYVDTGSVNTEDVILTPTDPRWI  256 (633)
T ss_pred             HHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHh-cccccccCCCCCCCCCCCCccHH
Confidence            38999999999999999999999999999999999999999999999999999886 32                     


Q ss_pred             -CcchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhcc
Q psy11734         60 -SWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTH  138 (817)
Q Consensus        60 -gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (817)
                       +||..|++.+++.++..+..+++.++.|++.++.+.++.+.  +..+.     .++.++++...               
T Consensus       257 GaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~---------------  314 (633)
T TIGR00805       257 GAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHET--EKLEK-----SEDKSRKKNSD---------------  314 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhh--hcccc-----cccccchhhhh---------------
Confidence             26667888888888877665554333343221111110000  00000     00000000000               


Q ss_pred             ccccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHH
Q psy11734        139 IPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYG  218 (817)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~  218 (817)
                                                                       ..++.+..+++++|||.++...+..++....
T Consensus       315 -------------------------------------------------~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~  345 (633)
T TIGR00805       315 -------------------------------------------------ITKDFPKIIKRLLCNPIYMLVILAQVIDSLA  345 (633)
T ss_pred             -------------------------------------------------hHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence                                                             0001123467899999999999999999999


Q ss_pred             HHHHhhchhhHHHHhhCCcccccchhhhhhHH-HHHHHHhhhHHHHHHHhhc
Q psy11734        219 LYLISTDLPKYMSEVIGLSVAENGVLSALPFL-IMWLVSMSSSALADFFIAR  269 (817)
Q Consensus       219 ~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i-~~~ig~~~~G~l~dk~g~r  269 (817)
                      ++++.+|+|.|+++.+|+++.+++++..+..+ +.+++.+++|+++||++.+
T Consensus       346 ~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~  397 (633)
T TIGR00805       346 FNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN  397 (633)
T ss_pred             HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence            99999999999999999999999999887776 6789999999999998855

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.68  E-value=1.7e-16  Score=201.43  Aligned_cols=263  Identities=14%  Similarity=0.068  Sum_probs=190.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc---------cCcchhHHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT---------ASWANVFYIFGAI   71 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~---------~gWr~~f~i~~~~   71 (817)
                      +|+++|++.+...|...+++.|++|+++|++++|+...+..+|.++|+.+++++.+ .         .+|++.+.+....
T Consensus       109 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~  187 (1146)
T PRK08633        109 VTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE-SVNGNTPSEILGRIAPAGLVLLA  187 (1146)
T ss_pred             HHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH-hhccccccccccchHHHHHHHHH
Confidence            48899999999999999999999999999999999999999999999999999988 4         3455665555444


Q ss_pred             HHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCc
Q psy11734         72 AVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGK  151 (817)
Q Consensus        72 ~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (817)
                      ..++.++..+.+|+.|+..+...+++.             ...   .                                 
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~---~---------------------------------  218 (1146)
T PRK08633        188 VAVLGLIFAYRLPKVPAAAPEVFDKKK-------------YLF---P---------------------------------  218 (1146)
T ss_pred             HHHHHHHHHhcCcCCCCCCcccccccc-------------ccc---H---------------------------------
Confidence            444444444445554432211100000             000   0                                 


Q ss_pred             cchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHH
Q psy11734        152 HTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMS  231 (817)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~  231 (817)
                                                            +....+++.++++|.++...+..++.....+....++|.|++
T Consensus       219 --------------------------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (1146)
T PRK08633        219 --------------------------------------KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAK  260 (1146)
T ss_pred             --------------------------------------HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence                                                  001224667888999988888888877778888889999999


Q ss_pred             HhhCCccc-ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHH
Q psy11734        232 EVIGLSVA-ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFF  310 (817)
Q Consensus       232 ~~~g~s~~-~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (817)
                      +.+|++.. +.+++.....++.++++++.|++.||.++++.          ..++.++..++++.+.... +.+...+..
T Consensus       261 ~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  329 (1146)
T PRK08633        261 EVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL----------VPLGALGLALSLFLLPTAP-SLASVLVLF  329 (1146)
T ss_pred             HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc----------hhHHHHHHHHHHHHHHHhh-hHHHHHHHH
Confidence            98999998 99999999999999999999999999998875          5555555555555554443 444444444


Q ss_pred             HHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734        311 TIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT  362 (817)
Q Consensus       311 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~  362 (817)
                      ++.+++.+...+...+...+..| ++||+++|+.+++.++|..+++.+.+.+.
T Consensus       330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~  382 (1146)
T PRK08633        330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS  382 (1146)
T ss_pred             HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            55555555555555666666554 78999999999999999887776665443

>PTZ00207 hypothetical protein; Provisional

Probab=99.67  E-value=1.5e-14  Score=164.41  Aligned_cols=465  Identities=11%  Similarity=0.054  Sum_probs=275.0

Q ss_pred             HHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH
Q psy11734        215 HDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL  294 (817)
Q Consensus       215 ~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~  294 (817)
                      .....|++..+.|.. ++.+|+|..+.+.+..... ......+.+|++.||+|+|++          ..++.++..++.+
T Consensus        39 ~~g~~y~fsv~s~~L-~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~v----------llig~ll~~iG~l  106 (591)
T PTZ00207         39 CTSFMYAFNLISGAM-QARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPI----------FVLSMTVFCLGTL  106 (591)
T ss_pred             HHHHHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHH----------HHHHHHHHHHHHH
Confidence            345667777767755 5568999999888776533 334566678999999999986          7777777777777


Q ss_pred             hhhccC-----CChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccC
Q psy11734        295 AASYVG-----CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISIN  369 (817)
Q Consensus       295 ~~~~~~-----~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~  369 (817)
                      ......     .+.+...+...+.+.+.+...+.......+.+|++||.+.|+......+|+++.+.+...+...     
T Consensus       107 l~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-----  181 (591)
T PTZ00207        107 LFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-----  181 (591)
T ss_pred             HHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence            666541     2444444444455545444444445555667889999999999999999998655544433221     


Q ss_pred             CCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc---ccCCCC
Q psy11734        370 PIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY---WNESIL  446 (817)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  446 (817)
                                                               +|+..|++.+++.++..++...+-+..+.+   +++++.
T Consensus       182 -----------------------------------------~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~  220 (591)
T PTZ00207        182 -----------------------------------------NTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHL  220 (591)
T ss_pred             -----------------------------------------hHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCC
Confidence                                                     477777777777766555444444333221   111100


Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734        447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI  526 (817)
Q Consensus       447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~  526 (817)
                      .......                                          ....++.+.+-+  |.   .++   -..+..
T Consensus       221 ~~~~~~~------------------------------------------~~~~~~~y~~q~--~p---~~~---f~~~~~  250 (591)
T PTZ00207        221 DEEEKAQ------------------------------------------RLMRKGVYLKQK--AP---MWR---FVYGFV  250 (591)
T ss_pred             CHHHHHH------------------------------------------HhhhhhhhhhcC--CC---cee---hhhHHH
Confidence            0000000                                          000000000000  00   111   134555


Q ss_pred             HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHH---HHHH-HHHHHhh-hcchH-----H------HHHHHHHHhhh-
Q psy11734        527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLST---AIFT-LLTPLIA-HSGPV-----S------MTVLRFLEGVG-  589 (817)
Q Consensus       527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~---~i~~-~l~~~a~-~~s~~-----~------l~~~R~l~Gig-  589 (817)
                      .++....|...+.+..... +.++..-..++.+..   ...- +..+.-. +..-.     .      ---.+.-..=+ 
T Consensus       251 i~~~l~~yl~~~~~~~~~~-~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (591)
T PTZ00207        251 ILIILIVFLPLQGALVAYL-KLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDK  329 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccc
Confidence            5555555555554444321 222222122222111   1111 1111110 00000     0      00000000000 


Q ss_pred             --cc--------cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhH--HHHHHHHHHHHHHHHHH
Q psy11734        590 --ED--------LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAE--NGVLSALPFLIMWLVSM  657 (817)
Q Consensus       590 --~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~--~~~~~~~~~~~~~ig~~  657 (817)
                        ..        ..+++.+.+++.++|++++.++|.......+...+....+..-|.+.++  ...+.++.++.+.+|++
T Consensus       330 ~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl  409 (591)
T PTZ00207        330 VVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRL  409 (591)
T ss_pred             cccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHH
Confidence              00        0114567788899999999999999999999999998887732663322  33378899999999999


Q ss_pred             HHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchH
Q psy11734        658 SSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSG  737 (817)
Q Consensus       658 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  737 (817)
                      .+|+++...-+|+.- .+-.|...+.+..+ +.++.+++.... +.....+..++.+++.|...+......+|++.++-|
T Consensus       410 ~~g~~~~~~~~~~~~-~r~prt~~l~~~~~-~~~~~lll~~~~-p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g  486 (591)
T PTZ00207        410 CMSYFEIWSQKRRAE-DRVPITIALFIPSV-CIITMLTLFLTL-PKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPA  486 (591)
T ss_pred             HHHHHHHHHHhhccc-cccchhHHHHHHHH-HHHHHHHHHHHC-CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchH
Confidence            999999444444310 11236677777777 555555555543 225677777888888898889999999999999899


Q ss_pred             HHHHHHHHHHHHHHhHH-HHHHHHhhcCCc----------cccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        738 TIMALSNGLGCVSGMVA-PLTVGFLTQNKT----------LLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       738 ~~~g~~~~~~~~g~~i~-p~~~g~~~~~~g----------~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      +-.-+.....-+|+.+- -.+.|.+.|...          ..=++..|++++++++++.+....+
T Consensus       487 ~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l  551 (591)
T PTZ00207        487 KHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV  551 (591)
T ss_pred             HHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence            98888877777776665 567888887642          1227899999999999988876654

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.67  E-value=4.9e-16  Score=175.11  Aligned_cols=392  Identities=14%  Similarity=0.134  Sum_probs=234.7

Q ss_pred             ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhhe
Q psy11734          3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCIL   82 (817)
Q Consensus         3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~   82 (817)
                      ++.|+|.|... .....++|..|.|.|+...++......+...+++.++..+.. ..+|||.|++..+...+..++.+++
T Consensus       139 ~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-~~~WRw~~~~~~i~~~i~~vl~~~f  216 (599)
T PF06609_consen  139 VLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA-HSGWRWIFYIFIIWSGIALVLIFFF  216 (599)
T ss_pred             HHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc-CCCcchHHHHHHHHHHHHHHHHHHH
Confidence            35678876554 456668999999999998888877766666678888877777 7899999999988776665554444


Q ss_pred             eccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhcccc-ccccccccCCccchhHHHHHH
Q psy11734         83 CFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIP-GGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        83 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      .+.+|+...+.++..+.   +        +-+++||-.    ..+....+..-+..+- +|--...+++.+++...+.+.
T Consensus       217 Y~PP~~~~~~~~~~s~~---~--------~l~~lD~IG----~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~  281 (599)
T PF06609_consen  217 YFPPPRAQLHGRKLSKR---E--------QLKELDWIG----IFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGF  281 (599)
T ss_pred             hCCCchhhhccccCcHH---H--------HHHHhhHHH----HHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHH
Confidence            32221111000000000   0        012344422    2222222222222221 222223566666666666666


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCc-ccCchHHHHhhc-hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGE-DLKTPWAAILYS-LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~-~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                      .++..++.+               |...+ +.+.-..++||+ |.+....+..++.++.+|....+.|+.....++-|+.
T Consensus       282 ~~Lv~F~~w---------------E~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~  346 (599)
T PF06609_consen  282 VLLVAFVVW---------------EWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPI  346 (599)
T ss_pred             HHHHHHHHh---------------hhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCc
Confidence            665555444               22211 223334589998 5677777788888888999999999998888877764


Q ss_pred             ---ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-CCChhHHHHHHHHHHH
Q psy11734        240 ---ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAIFFTIGMA  315 (817)
Q Consensus       240 ---~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~  315 (817)
                         +.++...+...+..+|..+.|.+..|.++-|.         .+..+.+++..++.++... +++....+.+..+.+.
T Consensus       347 ~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw---------~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~  417 (599)
T PF06609_consen  347 SITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKW---------QLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGF  417 (599)
T ss_pred             ccceeehhhhhHHHHHHHHHHHHHHHHHHccchhH---------HHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHH
Confidence               67889999999999999999999988875553         3555665555544444433 3343344455555555


Q ss_pred             Hhhhccccccccccc-cCCCchhHHHHHHHhhhhhcccccccccceecccccccC----------CCCCCCCCccchhhc
Q psy11734        316 FMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISIN----------PIDLSPNFSGTIMAL  384 (817)
Q Consensus       316 ~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~----------~~~~~~~~~~~~~~~  384 (817)
                      +.+.......+..+- .++++.|+++|+..+.|.+|+++|..+...+..+.-...          +..+++...+.....
T Consensus       418 giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a  497 (599)
T PF06609_consen  418 GIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEA  497 (599)
T ss_pred             hHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHH
Confidence            555544434334433 555899999999999999999999999877765431111          112211111111100


Q ss_pred             c-----cCccccccccccccccc---cccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734        385 S-----NGLGCVSGMVAPLTVGF---LTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG  436 (817)
Q Consensus       385 ~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~  436 (817)
                      .     .....+++.- +.+...   -.++...++|+++|+....+.+++.+..++++.-
T Consensus       498 ~~~~~~~a~~~iPGit-~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~  556 (599)
T PF06609_consen  498 LAAGNLEALAAIPGIT-PEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDI  556 (599)
T ss_pred             HhccChhHHhhCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence            0     0111123221 111111   1122345789999999999999998888887643

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.67  E-value=6.1e-16  Score=172.07  Aligned_cols=246  Identities=13%  Similarity=0.017  Sum_probs=172.1

Q ss_pred             ccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhheeccCCCCCC
Q psy11734         12 TFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHP   91 (817)
Q Consensus        12 ~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~   91 (817)
                      ..+..-++..|+.++|+++...+....+..+|..+|+.+.+++.+ ..|||..|++.+.+.++..+..++..|++|++++
T Consensus       114 ~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~-~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~  192 (390)
T TIGR02718       114 QDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG-KFGQRPAFLLVACVPLASLVCVLWLKDRAVASPE  192 (390)
T ss_pred             HHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccc
Confidence            344445566788888888888888888889999999999999999 8999999999998877766665554333221100


Q ss_pred             CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhhcc
Q psy11734         92 YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLV  171 (817)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (817)
                          +++.                                                                        
T Consensus       193 ----~~~~------------------------------------------------------------------------  196 (390)
T TIGR02718       193 ----APLA------------------------------------------------------------------------  196 (390)
T ss_pred             ----cchh------------------------------------------------------------------------
Confidence                0000                                                                        


Q ss_pred             cCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhH-H
Q psy11734        172 AHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPF-L  250 (817)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~-i  250 (817)
                                          ...+.++++|+|.++...+..++..........+.|.|++| +|+++++.|.+..... .
T Consensus       197 --------------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~  255 (390)
T TIGR02718       197 --------------------RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAV  255 (390)
T ss_pred             --------------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHH
Confidence                                01236788999998888888888888788888889999988 6999999999888776 4


Q ss_pred             HHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHH-HHhhhcc----CCChhHHHHHHHHHHHHhhhcccccc
Q psy11734        251 IMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVG-ALAASYV----GCNTSMVAIFFTIGMAFMGFCYASIR  325 (817)
Q Consensus       251 ~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~l~~~~~g~~~~~~~  325 (817)
                      ...++.+++|++.||+++|+.          ...+..+..+. +......    .++.........+.....+...+...
T Consensus       256 ~~~~g~~~~g~l~~r~g~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  325 (390)
T TIGR02718       256 TVLLGCGGGAWLVRRAGLWRT----------FILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIY  325 (390)
T ss_pred             HHHHHHHHHHHHHHHhhHHHH----------HHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            677889999999999999875          33343333221 1111111    11222223333333334444444443


Q ss_pred             cc-ccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        326 VN-PIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       326 ~~-~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      .. .....| +++|+.+++.+...++|..++|.+.|.+.|..
T Consensus       326 ~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~  367 (390)
T TIGR02718       326 TAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF  367 (390)
T ss_pred             HHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33 344555 78999999999999999999999999998875

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>KOG3764|consensus

Probab=99.66  E-value=1.8e-16  Score=164.00  Aligned_cols=258  Identities=15%  Similarity=0.094  Sum_probs=192.8

Q ss_pred             CcccccCCcccccchhhhhhhhccCCC-CcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPN-ERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~-~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~   79 (817)
                      .|.+||+|.+..+...+++++|.||+| ||++++|+...+.++|-.+||+.||.+.+ ..|-+.+|++.+.+.++-..+-
T Consensus       165 AR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe-~~Gk~aPFlVL~~v~Lld~~L~  243 (464)
T KOG3764|consen  165 ARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE-FAGKSAPFLVLAIVLLLDGALQ  243 (464)
T ss_pred             HHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh-hcCCcCcHHHHHHHHHHHHHHH
Confidence            399999999999999999999999976 68999999999999999999999999999 9999999999999999988888


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      ++.+++...+++     +                                                              
T Consensus       244 l~vi~p~~~~~~-----~--------------------------------------------------------------  256 (464)
T KOG3764|consen  244 LLVIEPTEMDPD-----S--------------------------------------------------------------  256 (464)
T ss_pred             HheeCccccCcc-----c--------------------------------------------------------------
Confidence            887754321110     0                                                              


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                                                    +.+..|+++++++|.++.........+.+.-..--.+|.++.|...-+.-
T Consensus       257 ------------------------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w  306 (464)
T KOG3764|consen  257 ------------------------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGW  306 (464)
T ss_pred             ------------------------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCc
Confidence                                          01244688999999999888887777777777777788888887775555


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~  319 (817)
                      +.|+...|..+..+++..+.|.++||+++.++.        ....+.+..+++.....+.+ ++...++-.....++.+.
T Consensus       307 ~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl--------~~~~gl~~~G~~~~~iP~~~-~~~~L~vp~~~l~~~i~~  377 (464)
T KOG3764|consen  307 EVGLAFLPASLSYAIGTNLFGKLADKYPHLRWL--------LSLGGLATVGVSSGPIPFAT-SIAQLWVPNFGLGFGIGL  377 (464)
T ss_pred             ceeeeecccccchhccCchHHHHHHhcCchhHH--------HHHHHHHHHHHHhchhHhhh-hHHHHhhhhHHHHHHHHH
Confidence            999999999999999999999999999965531        23344444444433344443 333332222222222222


Q ss_pred             cc-ccccccccccCC---C---chhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        320 CY-ASIRVNPIDLSP---N---FSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       320 ~~-~~~~~~~~~~~p---~---~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      .. ........-+.+   +   ..|+.+++......+|.++||.++|.+.+..
T Consensus       378 ~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i  430 (464)
T KOG3764|consen  378 ADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI  430 (464)
T ss_pred             HHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh
Confidence            22 222222222222   2   4689999999999999999999999998876

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.65  E-value=1.7e-16  Score=179.34  Aligned_cols=260  Identities=14%  Similarity=0.126  Sum_probs=182.5

Q ss_pred             cccCCcccccchhhhhhhhcc-CCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------cccCcchhHHHHhhhHHHHH
Q psy11734          4 MSNFPKGTTFPALCTLLAQWS-PPNERSFMTALVFAGVQLGSVLATFCSGLIMS------FTASWANVFYIFGAIAVLWF   76 (817)
Q Consensus         4 l~G~g~g~~~~~~~~~i~~~~-p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------~~~gWr~~f~i~~~~~~i~~   76 (817)
                      +.+++.+...+...++..|.. +++||++..++...+..+|..+++.+.+.+..      ...|||+++++.+++.++..
T Consensus       108 ~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~  187 (437)
T TIGR00792       108 LLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSL  187 (437)
T ss_pred             HHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHH
Confidence            344455555556667778877 46899999999999888888887776655542      14689999999998888887


Q ss_pred             hhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734         77 AFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL  156 (817)
Q Consensus        77 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (817)
                      ++.++..||++++.+.   +++             ++.                                          
T Consensus       188 ~~~~~~~~e~~~~~~~---~~~-------------~~~------------------------------------------  209 (437)
T TIGR00792       188 IICFFGTKERYSEIPK---NIE-------------KKL------------------------------------------  209 (437)
T ss_pred             HHHHcCCEecCCCCCc---ccc-------------cCC------------------------------------------
Confidence            7777777665422110   000             000                                          


Q ss_pred             HHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCC
Q psy11734        157 GFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGL  236 (817)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~  236 (817)
                                                        +.++.++++++||+++...+..++.....+....+.+.|.++.++ 
T Consensus       210 ----------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  254 (437)
T TIGR00792       210 ----------------------------------SLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-  254 (437)
T ss_pred             ----------------------------------CHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-
Confidence                                              012236788999999988888888888887777777777766555 


Q ss_pred             cccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHH
Q psy11734        237 SVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAF  316 (817)
Q Consensus       237 s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  316 (817)
                      +..+.+.+.....++.+++.++.++++||+|+|+.          ...+..+..++...+.+..++.....+...+.+++
T Consensus       255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  324 (437)
T TIGR00792       255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKIL----------FAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFG  324 (437)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH----------HHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHH
Confidence            45566667777789999999999999999998875          55666666666555554433434444444445555


Q ss_pred             hhhccccccccccccC--------CCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        317 MGFCYASIRVNPIDLS--------PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       317 ~g~~~~~~~~~~~~~~--------p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      .+...+...+...|..        ++.+|+++|+.++...+|+++++.+.|.+.|..|
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G  382 (437)
T TIGR00792       325 QNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG  382 (437)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            5555555555554432        3568999999999999999999999999998865

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.64  E-value=1.8e-13  Score=152.60  Aligned_cols=405  Identities=15%  Similarity=0.082  Sum_probs=259.4

Q ss_pred             HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHH----HhhcCcccchhhHHHHHH
Q psy11734        208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADF----FIARDILSRTNVRKVFAT  283 (817)
Q Consensus       208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk----~g~r~~~~~~~~~~~~~~  283 (817)
                      .....+....++.....+.+.|+++ .|.+..+.+.+.....+.+++..++.|+++||    +||||.         ++.
T Consensus         9 ~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp---------~il   78 (477)
T TIGR01301         9 VASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP---------FIA   78 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH---------HHH
Confidence            3334444455666667778888876 79999999999999999999999999999994    888876         355


Q ss_pred             HHhHHHHHHHHhhhccCCC-------------h---hHHHHHHHHHHHHhhhccccccccccccCC-Cch--hHHHHHHH
Q psy11734        284 LGAVLPGVGALAASYVGCN-------------T---SMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFS--GTIMALSN  344 (817)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~--g~a~g~~~  344 (817)
                      .+.....+++.++.+..+.             .   ......+.+..+......+...+...|..| ++|  +.++++.+
T Consensus        79 ~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~  158 (477)
T TIGR01301        79 AGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFS  158 (477)
T ss_pred             HHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHH
Confidence            5566666666666553321             0   122222333344555555556777888666 443  68999999


Q ss_pred             hhhhhcccccccccceec--ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHH
Q psy11734        345 GLGCVSGMVAPLTVGFLT--QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLA  422 (817)
Q Consensus       345 ~~~~lg~~~~~~i~g~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~  422 (817)
                      .+..+|+.+|+.+.+...  +..+- .                          ...     ..+....+++..|++.+++
T Consensus       159 ~~~~lG~ilg~~~g~~~~~~~~~~~-~--------------------------~~~-----~~~~~~~~~~~~F~i~a~~  206 (477)
T TIGR01301       159 FFMAIGNVLGYAAGAYSGLYKIFPF-T--------------------------KTE-----ACGVSCANLKSCFLIDIIL  206 (477)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHhccc-c--------------------------ccc-----ccccccchHHHHHHHHHHH
Confidence            999999999999888642  11110 0                          000     0000123799999999999


Q ss_pred             HHHhhhhheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCc
Q psy11734        423 LVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNH  502 (817)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (817)
                      .+++.+...+..||++...+++..+.                                                      
T Consensus       207 l~i~~l~t~~~v~E~~~~~~~~~~~~------------------------------------------------------  232 (477)
T TIGR01301       207 LAILTYIALSAVKENPLIGSDDFINS------------------------------------------------------  232 (477)
T ss_pred             HHHHHHHHeeeeeccCCCccccchhh------------------------------------------------------
Confidence            99999998888777543211110000                                                      


Q ss_pred             eeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q psy11734        503 TVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVL  582 (817)
Q Consensus       503 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~  582 (817)
                           +++    +.+-...                             +.                .+.+          
T Consensus       233 -----~~~----~~~~~~~-----------------------------~~----------------~~~~----------  248 (477)
T TIGR01301       233 -----EAA----PPSKHGE-----------------------------EA----------------FFGE----------  248 (477)
T ss_pred             -----hcc----cccccch-----------------------------hh----------------hHHH----------
Confidence                 000    0000000                             00                0000          


Q ss_pred             HHHHhhhcccCchhHHhhc-CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHH-HhCCCh------hHH---H-HHHHHHHH
Q psy11734        583 RFLEGVGEDLETPWAAILS-SLPVWSLIISEVGHDYGFYLISSDLPKYMSQ-VIGLSV------AEN---G-VLSALPFL  650 (817)
Q Consensus       583 R~l~Gig~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~------~~~---~-~~~~~~~~  650 (817)
                                  -++.+.+ -|..+.+++..++.-.+.+.+..|.+.|+.+ ++|-++      ++.   | +......+
T Consensus       249 ------------i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~  316 (477)
T TIGR01301       249 ------------LFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSV  316 (477)
T ss_pred             ------------HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence                        0111111 3678899999999999999999999999884 555432      122   2 23334555


Q ss_pred             HHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcC---c-----------------hHHHHHHH
Q psy11734        651 IMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGC---N-----------------TSMVAICF  710 (817)
Q Consensus       651 ~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~~~~  710 (817)
                      ...+.+++..++.+|+|+|+..         -..+.++.+++++...+...   +                 .+..+..+
T Consensus       317 ~~~i~s~~l~~l~~~~g~~k~~---------~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  387 (477)
T TIGR01301       317 VLGITSIGMEKLCRGWGAGKRL---------WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVF  387 (477)
T ss_pred             HHHHHHHHHHHHHHHhccchhH---------HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHH
Confidence            5567777888888888853221         14665666666666554321   0                 25556666


Q ss_pred             HHHHHHHhhhhhhhhhhccccCC---CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHH
Q psy11734        711 TIGMAFMGFCYASIRVNPIDLSP---NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVF  787 (817)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~  787 (817)
                      ...++.....++..++..++..+   +..|..+|+.|.+-.+.+.+.....|.+.+..|. +-..++.+.++..+++.+.
T Consensus       388 ~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~-~~~~~~~~~gv~~~~aa~~  466 (477)
T TIGR01301       388 AILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG-GNLPAFVVGAVAAFVSGLL  466 (477)
T ss_pred             HHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC-CCeeHHHHHHHHHHHHHHH
Confidence            66777777777777777776655   4569999999999999999999999987666653 3456788888888888887


Q ss_pred             HHHhccC
Q psy11734        788 FVLFGSG  794 (817)
Q Consensus       788 ~~~~~~~  794 (817)
                      .++..++
T Consensus       467 ~~~~~~~  473 (477)
T TIGR01301       467 ALILLPR  473 (477)
T ss_pred             HHHhCCC
Confidence            7766433

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.63  E-value=9.9e-16  Score=170.76  Aligned_cols=283  Identities=11%  Similarity=0.090  Sum_probs=189.8

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|++.+...|....+..|.-  +++++..|......++|.++||.+++.+.+  .+||++|++.+.+.++..++.+.
T Consensus       106 ~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~--~~~~~~f~~~~~~~~~~~~~~~~  181 (396)
T TIGR00882       106 GLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS--IDPQIVFWLGSGFALILMLLLMF  181 (396)
T ss_pred             HHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc--cCchHHHHHHHHHHHHHHHHHHH
Confidence            45566667767777766666642  445667788888889999999999998876  59999999998888877666555


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      ..|++|+++      +.++.    .+   .++                                                
T Consensus       182 ~~~~~~~~~------~~~~~----~~---~~~------------------------------------------------  200 (396)
T TIGR00882       182 AKPKAPSSA------TVANA----LG---ANA------------------------------------------------  200 (396)
T ss_pred             hCCCCchhh------hhhcc----cc---ccc------------------------------------------------
Confidence            444332211      00000    00   000                                                


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhh---CCcc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVI---GLSV  238 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~---g~s~  238 (817)
                                                 ++++..+.++++|||+++...+..++....+.....+.|.|+++.+   +.+.
T Consensus       201 ---------------------------~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~  253 (396)
T TIGR00882       201 ---------------------------SAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGT  253 (396)
T ss_pred             ---------------------------CCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence                                       0011234678999999887777766666666666678888888754   4555


Q ss_pred             cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhh
Q psy11734        239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMG  318 (817)
Q Consensus       239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g  318 (817)
                      ...|.......+...++.+..|++.||.++|+.          ...+..+..+........+ +.+.......+.+.+..
T Consensus       254 ~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~----------l~~~~~l~~l~~~~~~~~~-~~~~~~~~~~l~g~~~~  322 (396)
T TIGR00882       254 RVFGYVTTMGELLNALIMFCAPLIINRIGAKNA----------LLIAGTIMSVRIIGSSFAT-TALEVVILKMLHAFEVP  322 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh----------HHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHH
Confidence            667888888888999999999999999999986          5666666666555544433 44333333333333332


Q ss_pred             hcccccccccccc-CCCchhHHHHH-HHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734        319 FCYASIRVNPIDL-SPNFSGTIMAL-SNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA  396 (817)
Q Consensus       319 ~~~~~~~~~~~~~-~p~~~g~a~g~-~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (817)
                      ........+..+. +++.++++.+. .+....+|+.+++.+.|.+.|..                               
T Consensus       323 ~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-------------------------------  371 (396)
T TIGR00882       323 FLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-------------------------------  371 (396)
T ss_pred             HHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-------------------------------
Confidence            2222222333443 44677777766 67889999999999999999875                               


Q ss_pred             cccccccccCCccchhHHHHHHHHHHHHHhhhhhee
Q psy11734        397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVL  432 (817)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~  432 (817)
                                    ||+..|.+.+++.+++.++..+
T Consensus       372 --------------G~~~~f~~~~~~~~i~~~~~~~  393 (396)
T TIGR00882       372 --------------GFQGAYLVLGCIVLLFTLISVF  393 (396)
T ss_pred             --------------ccHHHHHHHHHHHHHHHHHHHH
Confidence                          5899999998888877766543

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.63  E-value=5.6e-14  Score=164.25  Aligned_cols=286  Identities=13%  Similarity=0.082  Sum_probs=190.7

Q ss_pred             HHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC--------
Q psy11734        229 YMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG--------  300 (817)
Q Consensus       229 ~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  300 (817)
                      -+++.++++..+.|++.+...++.+++.++.|++.||.+||+.          +..+.++.+++.++.....        
T Consensus        58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~----------i~~g~ll~~lg~ll~alphf~~~~y~~  127 (633)
T TIGR00805        58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIV----------IGIGCAIMGLGSFLLSLPHFLSGRYSY  127 (633)
T ss_pred             hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceE----------EEecHHHHHHHHHHHhChHHhcCCccc
Confidence            3455589999999999999999999999999999999999987          6677777777666654331        


Q ss_pred             -----------------------------------------C-ChhHHHHHHHHHHHHhhhccccccccccccCC-Cchh
Q psy11734        301 -----------------------------------------C-NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSG  337 (817)
Q Consensus       301 -----------------------------------------~-~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g  337 (817)
                                                               . .+...++.-++.+.+.+...+....++.|..| ++|+
T Consensus       128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~  207 (633)
T TIGR00805       128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSP  207 (633)
T ss_pred             cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccH
Confidence                                                     0 01122333444444455555666778888666 7899


Q ss_pred             HHHHHHHhhhhhcccccccccceecccccccCCCCCCC-CCccchhhcccCccccccccccccccccccCC-ccchhHHH
Q psy11734        338 TIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK-TLSEWRVV  415 (817)
Q Consensus       338 ~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  415 (817)
                      ...|+.+....+|.++|+.+.+.+.+...++...+.++ ..++                         ++. ...+|+..
T Consensus       208 ~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~-------------------------~dprWiGaWwl~  262 (633)
T TIGR00805       208 LYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTP-------------------------TDPRWIGAWWIG  262 (633)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCC-------------------------CCccHHHHHHHH
Confidence            99999999999999999999999887654332111000 0000                         000 11248888


Q ss_pred             HHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCC
Q psy11734        416 FWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCF  495 (817)
Q Consensus       416 f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (817)
                      |++.+++.++..+..++++|+.++...+...+..                            .+     +          
T Consensus       263 Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~----------------------------~~-----~----------  299 (633)
T TIGR00805       263 FLICGGVALLTSIPFFFFPKALPKEGKRVNVDVH----------------------------ET-----E----------  299 (633)
T ss_pred             HHHHHHHHHHHHHHHHhCccccCCcccccchhhh----------------------------hh-----h----------
Confidence            9988888777666666665543322110000000                            00     0          


Q ss_pred             CCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11734        496 PNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSG  575 (817)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s  575 (817)
                       ..+  . .+++  +.  ++.+                                .+                  . .  +
T Consensus       300 -~~~--~-~~~~--~~--~~~~--------------------------------~~------------------~-~--~  318 (633)
T TIGR00805       300 -KLE--K-SEDK--SR--KKNS--------------------------------DI------------------T-K--D  318 (633)
T ss_pred             -ccc--c-cccc--cc--hhhh--------------------------------hh------------------H-H--H
Confidence             000  0 0000  00  0000                                00                  0 0  0


Q ss_pred             hHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH-HHHH
Q psy11734        576 PVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL-IMWL  654 (817)
Q Consensus       576 ~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~-~~~i  654 (817)
                      +                ...+++++++|.++...+..++.....+++.+|+|.|+++++|+++.+++.+.....+ +.++
T Consensus       319 ~----------------~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~v  382 (633)
T TIGR00805       319 F----------------PKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGL  382 (633)
T ss_pred             H----------------HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHH
Confidence            0                1235789999999999999999999999999999999999999999999999887776 6789


Q ss_pred             HHHHHHHHHhhhhcc
Q psy11734        655 VSMSSSALADYLIVR  669 (817)
Q Consensus       655 g~~~~g~l~dr~g~~  669 (817)
                      |.+++|+++||++.+
T Consensus       383 G~~l~G~l~~r~~~~  397 (633)
T TIGR00805       383 GYLIGGFIMKKFKLN  397 (633)
T ss_pred             HHhhhhheeeeeccc
Confidence            999999999999854

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK11462 putative transporter; Provisional

Probab=99.62  E-value=1.1e-13  Score=156.62  Aligned_cols=356  Identities=10%  Similarity=0.006  Sum_probs=216.4

Q ss_pred             HHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH
Q psy11734        212 EVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV  291 (817)
Q Consensus       212 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~  291 (817)
                      -+..+.....+..|++.|+.++.|.++..+|.+.+..-+...+.-++.|+++||...|.     +.|+..+..+....++
T Consensus        18 ~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~-----Gr~rp~il~g~i~~~i   92 (460)
T PRK11462         18 DAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRW-----GKFRPWVLFGALPFGI   92 (460)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCC-----CCcchhHhHHHHHHHH
Confidence            33445556666788999999999999999999999999999999999999999853321     1233357777666666


Q ss_pred             HHHhhhccCC-C----hhHHHHHHHHHHHHhhhccccccccccccCC--CchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734        292 GALAASYVGC-N----TSMVAIFFTIGMAFMGFCYASIRVNPIDLSP--NFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  364 (817)
Q Consensus       292 ~~~~~~~~~~-~----~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p--~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~  364 (817)
                      ++.++...++ +    ..+..+...+...+.........+...+..+  ++|++.++.......+|+.+++.+...+.+.
T Consensus        93 ~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~  172 (460)
T PRK11462         93 VCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL  172 (460)
T ss_pred             HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666554432 1    1222222222333333444444556666544  7999999999999999888887776655544


Q ss_pred             ccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCC
Q psy11734        365 IISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNES  444 (817)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (817)
                      .|+                                      +....+|.....+.+++.+++..+.....||+.++.+ +
T Consensus       173 ~g~--------------------------------------~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~-~  213 (460)
T PRK11462        173 IGG--------------------------------------DNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP-T  213 (460)
T ss_pred             hCC--------------------------------------CchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc-c
Confidence            321                                      0012368877777777666665554443333221100 0


Q ss_pred             CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734        445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG  524 (817)
Q Consensus       445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g  524 (817)
                                                                                            +.  +     
T Consensus       214 ----------------------------------------------------------------------~~--~-----  216 (460)
T PRK11462        214 ----------------------------------------------------------------------TT--S-----  216 (460)
T ss_pred             ----------------------------------------------------------------------CC--C-----
Confidence                                                                                  00  0     


Q ss_pred             HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHh
Q psy11734        525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLP  604 (817)
Q Consensus       525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~  604 (817)
                                                                   +                      ++.++..++||.
T Consensus       217 ---------------------------------------------~----------------------~~~l~~~~~Nk~  229 (460)
T PRK11462        217 ---------------------------------------------M----------------------REDLRDIWQNDQ  229 (460)
T ss_pred             ---------------------------------------------H----------------------HHHHHHHhCChH
Confidence                                                         0                      012456778888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHH
Q psy11734        605 VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATL  684 (817)
Q Consensus       605 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~  684 (817)
                      ++.+....++..............|.+...|. ....+.+.....++++++.+++++++||+++|+..          ..
T Consensus       230 ~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~----------~~  298 (460)
T PRK11462        230 WRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF----------WW  298 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----------HH
Confidence            87776666666665555555555555555554 33445566677889999999999999999987642          11


Q ss_pred             HHHHHHHHHHHHHhhcC-chHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHHHHHHHhHHH
Q psy11734        685 GAVLPGVGALAASYVGC-NTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGLGCVSGMVAP  755 (817)
Q Consensus       685 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~i~p  755 (817)
                      +..+..+..+++.+.+. +........++.+.+.+...+..+....|...        +.-|...+..++...+|..+++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~  378 (460)
T PRK11462        299 TNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGG  378 (460)
T ss_pred             HHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence            22222222222222222 22223333333444444444444444544332        3346666777899999999999


Q ss_pred             HHHHHhhcCCc
Q psy11734        756 LTVGFLTQNKT  766 (817)
Q Consensus       756 ~~~g~~~~~~g  766 (817)
                      .+.|.+.+..|
T Consensus       379 ~i~g~iL~~~G  389 (460)
T PRK11462        379 ALIGWMLAYGG  389 (460)
T ss_pred             HHHHHHHHHcC
Confidence            99998887643

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.61  E-value=4.6e-15  Score=165.42  Aligned_cols=255  Identities=13%  Similarity=0.120  Sum_probs=176.3

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccc------------------------
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSF------------------------   57 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~------------------------   57 (817)
                      |++.|+|.|...+....++.+..|+|+|++++++.+...++|..+||.+++.+...                        
T Consensus       101 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (410)
T TIGR00885       101 LFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHS  180 (410)
T ss_pred             HHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHH
Confidence            78899999999999999999999999999999999999999999999999887540                        


Q ss_pred             -ccCcchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhh
Q psy11734         58 -TASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTL  136 (817)
Q Consensus        58 -~~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (817)
                       ..+||++|++.+.+.++..++..+ .+ .|+.++  +++++        .      +                      
T Consensus       181 ~~~~w~~~fl~~a~~~~~~~~~~~~-~~-~p~~~~--~~~~~--------~------~----------------------  220 (410)
T TIGR00885       181 DLASVQTPYMIIGAVVLAVALLIML-TK-MPALNH--SDAKQ--------I------S----------------------  220 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-hc-CCCCCc--ccccc--------c------c----------------------
Confidence             136999999998877766544432 22 232111  00000        0      0                      


Q ss_pred             ccccccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHH
Q psy11734        137 THIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHD  216 (817)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~  216 (817)
                                                                             ...+.++++|+|+++...+..++..
T Consensus       221 -------------------------------------------------------~~~~~~~~~~~~~~~~~~l~~f~yv  245 (410)
T TIGR00885       221 -------------------------------------------------------FSASLSRLARIRHYREGVIAQFFYV  245 (410)
T ss_pred             -------------------------------------------------------chhhHHHHHhChhHHHHHHHHHHHH
Confidence                                                                   0113457889999998888888877


Q ss_pred             HHHHHHhhchhhHHHHhh-CCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHh
Q psy11734        217 YGLYLISTDLPKYMSEVI-GLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALA  295 (817)
Q Consensus       217 ~~~~~~~~~~p~~l~~~~-g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (817)
                      ....+...+++.|.++.. +.+...++........+..+|+++++++.||+++|+.          ......+..+..++
T Consensus       246 g~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~----------l~i~~~~~~~~~ll  315 (410)
T TIGR00885       246 GVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV----------LMAYAIIGMALCLG  315 (410)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH----------HHHHHHHHHHHHHH
Confidence            777788889999997632 3343444545555667889999999999999998875          55555555555555


Q ss_pred             hhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhH-HHHHHHhhhhhcccccccccceecccc
Q psy11734        296 ASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGT-IMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       296 ~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~-a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ....+ +... ...+.+.+++....+|.......+..+|+..+ +.++....  +|+++.|.+.|.+.|..
T Consensus       316 ~~~~~-~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~  382 (410)
T TIGR00885       316 SIFAG-GHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK  382 (410)
T ss_pred             HHHcC-ChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence            55544 3333 33333444555555566655555555544433 44444433  99999999999999964

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.60  E-value=1e-13  Score=151.05  Aligned_cols=361  Identities=11%  Similarity=0.062  Sum_probs=263.6

Q ss_pred             HHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHH
Q psy11734        213 VGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVG  292 (817)
Q Consensus       213 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~  292 (817)
                      +..+..+.....|+..|++++.|.++..+|.+....=+..++.-++.|.++||..+|.     +.|+.++..+.+..++.
T Consensus        22 ~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~-----GrfRP~lL~g~ip~~i~   96 (467)
T COG2211          22 FASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRW-----GRFRPWLLWGAIPFAIV   96 (467)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccc-----ccccHHHHHHhHHHHHH
Confidence            3345566667789999999999999999999999999999999999999999865443     33555677776666666


Q ss_pred             HHhhhccCC-----ChhHHHHHHHHHHHHhhhccccccccccccC--CCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        293 ALAASYVGC-----NTSMVAIFFTIGMAFMGFCYASIRVNPIDLS--PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       293 ~~~~~~~~~-----~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ..++...++     +.....+...+...+.........+...+..  |++|.+..+....+..+|+.+...+.+.+.+..
T Consensus        97 ~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~  176 (467)
T COG2211          97 AVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLF  176 (467)
T ss_pred             HHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            666655542     2444444444445445454444555665544  579999999999999999888888877777665


Q ss_pred             cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734        366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI  445 (817)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (817)
                      +.                                      +....+|+..-.+.+++..+..+..++-.||+..+..+..
T Consensus       177 g~--------------------------------------~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~  218 (467)
T COG2211         177 GG--------------------------------------GDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTK  218 (467)
T ss_pred             CC--------------------------------------CcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCc
Confidence            41                                      1124578888888888888777777776666543211110


Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                      .                                                                    +.+.+.     
T Consensus       219 ~--------------------------------------------------------------------~~~~~~-----  225 (467)
T COG2211         219 T--------------------------------------------------------------------GVKLKL-----  225 (467)
T ss_pred             c--------------------------------------------------------------------cccccH-----
Confidence            0                                                                    000000     


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhH
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPV  605 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~  605 (817)
                                                                                         +..+..+++||++
T Consensus       226 -------------------------------------------------------------------~~~~~~~~~Nrp~  238 (467)
T COG2211         226 -------------------------------------------------------------------KDSFLLIFKNRPL  238 (467)
T ss_pred             -------------------------------------------------------------------HHHHHHHHccchH
Confidence                                                                               0123457789999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734        606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG  685 (817)
Q Consensus       606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~  685 (817)
                      ...++..++...+..-..+....|.+.++|.+.............+.+++.++..++++|+|+|+..          .++
T Consensus       239 ~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~----------~~~  308 (467)
T COG2211         239 LLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF----------LIG  308 (467)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH----------HHH
Confidence            9998888888888888888899999888888888887787778888888899999999999998764          466


Q ss_pred             HHHHHHHHHHHHhhcCc-hHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHHHHHHHhHHHH
Q psy11734        686 AVLPGVGALAASYVGCN-TSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGLGCVSGMVAPL  756 (817)
Q Consensus       686 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~i~p~  756 (817)
                      .++..++.+++.+.+.+ .+..++..++...+.+...+..++..+|...        |.-|...|.+.+++-+|.+++..
T Consensus       309 ~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~  388 (467)
T COG2211         309 LLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGF  388 (467)
T ss_pred             HHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence            77777777766666533 3455555567777777888888888877542        45799999999999999999999


Q ss_pred             HHHHhhcCCc
Q psy11734        757 TVGFLTQNKT  766 (817)
Q Consensus       757 ~~g~~~~~~g  766 (817)
                      +.|++.+..|
T Consensus       389 ~~g~~L~~~G  398 (467)
T COG2211         389 IPGWILGAIG  398 (467)
T ss_pred             HHHHHHHHcC
Confidence            9999988764

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.59  E-value=9.1e-15  Score=166.17  Aligned_cols=307  Identities=13%  Similarity=0.093  Sum_probs=170.5

Q ss_pred             cccccCCcccccchhhhhhhhccCCC--CcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPN--ERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~--~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~   79 (817)
                      |+++|+|.|...|...++++|.||++  ||+++.++++.+.++|..+||.+++++.+ +.|||++|++.++ +++..++.
T Consensus       112 ~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~-~~gw~~~F~i~~i-~~~~~~~~  189 (489)
T PRK10207        112 LGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD-KFGYSVTYNLCGA-GLIIALLV  189 (489)
T ss_pred             HHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH-hhChHHHHHHHHH-HHHHHHHH
Confidence            78999999999999999999999887  45889999999999999999999999999 9999999999643 55555555


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      +...++..++.+..+++                 ++.|+...   .+   +..+............++. +.........
T Consensus       190 ~~~~~~~~~~~~~~~~~-----------------~~~d~~~~---~l---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  245 (489)
T PRK10207        190 YFACRGMVKDIGSEPDH-----------------KPMSFSKL---LL---VLLGSVVMIFVCAWLMHNV-EVANLVLIVL  245 (489)
T ss_pred             HHHcchhhcccCCCCCc-----------------cchhhhhH---HH---HHHHHHHHHHHHHHHHhhh-hHHHHHHHHH
Confidence            44444322111000000                 00111110   00   0000000000000000100 0000000000


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHH--HHHHHHHHHHHhhchhhHHHHhhCCc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIIS--EVGHDYGLYLISTDLPKYMSEVIGLS  237 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~--~~~~~~~~~~~~~~~p~~l~~~~g~s  237 (817)
                      ......                 .++.. +.+ .   .+++|+|.+..+.+.  ..+....+....+.+|.+.++..+. 
T Consensus       246 ~~i~~~-----------------~f~~~-~~~-~---~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~-  302 (489)
T PRK10207        246 SIVVTI-----------------IFFRE-AFK-L---DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHH-  302 (489)
T ss_pred             HHHHHH-----------------HHHHH-Hhc-C---CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccc-
Confidence            000000                 01111 111 1   167788876554432  3333444444557788888753333 


Q ss_pred             ccccch------hhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhh-----hcc----CCC
Q psy11734        238 VAENGV------LSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAA-----SYV----GCN  302 (817)
Q Consensus       238 ~~~ag~------~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~  302 (817)
                       ...|+      +.....+..++.+++.+++.||.++|+.-..+..+   ...|+++.+++++.+     ...    ..+
T Consensus       303 -~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k---~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s  378 (489)
T PRK10207        303 -EILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMK---FTLGMFLCSLGFLTAAAAGMWFADAQGLTS  378 (489)
T ss_pred             -cccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHH---HHHHHHHHHHHHHHHHHHHHhhcCCCCccC
Confidence             23333      33334566778888999999999988631111111   334444444444321     111    113


Q ss_pred             hhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhccccccccccee
Q psy11734        303 TSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFL  361 (817)
Q Consensus       303 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l  361 (817)
                      .++......+.+.+-+...+.......+ .+++.+|.++|+.++.+++|+.++..+.+..
T Consensus       379 ~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~  438 (489)
T PRK10207        379 PWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT  438 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4444455555555565666655554544 5558999999999999999999988776543

>TIGR00889 2A0110 nucleoside transporter

Probab=99.59  E-value=3.6e-13  Score=150.81  Aligned_cols=334  Identities=12%  Similarity=0.015  Sum_probs=183.6

Q ss_pred             HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhH
Q psy11734        208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAV  287 (817)
Q Consensus       208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~  287 (817)
                      ..+..++.+..+-.....++.++++++|+|..+.|++.....++..++++..|+++||+|+||.         .+..+..
T Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~---------~~~~~~~   77 (418)
T TIGR00889         7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQK---------VYAVCHF   77 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH---------HHHHHHH
Confidence            4455566666666666788999998889999999999999999999999999999999976442         1445555


Q ss_pred             HHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcccccccc----cc----ccCC-CchhHHHHHHHhhhhhccccccccc
Q psy11734        288 LPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVN----PI----DLSP-NFSGTIMALSNGLGCVSGMVAPLTV  358 (817)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~----~~----~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~  358 (817)
                      +..+......+.+ +.+.......+.+.......+.....    ..    |... ..+.+..|      .+|.+++|.+.
T Consensus        78 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~  150 (418)
T TIGR00889        78 AGALLLFFAAQVT-TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAV  150 (418)
T ss_pred             HHHHHHHHHHHhc-CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHH
Confidence            5545444444433 33333333333333322222222111    11    2111 12323332      35667777776


Q ss_pred             ceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        359 GFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       359 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                      |.+ +..                                            ..|. .|++.+++.++..++..+.++.++
T Consensus       151 g~l-~~~--------------------------------------------~~~~-~f~~~~~~~~~~~~~~~~~~e~~~  184 (418)
T TIGR00889       151 SLL-DIE--------------------------------------------LSNI-QLYITAGSSALLGVFALTLPDIPV  184 (418)
T ss_pred             HHh-ccc--------------------------------------------chhH-HHHHHHHHHHHHHHHHhcCCCCCC
Confidence            654 111                                            0232 455666655555554444443321


Q ss_pred             ccccC-CC-Cc---hhH-HH-----HHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeec
Q psy11734        439 QYWNE-SI-LP---ARY-VL-----GIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSK  507 (817)
Q Consensus       439 ~~~~~-~~-~~---~~~-~i-----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (817)
                      ++.++ .. .+   ... .+     ++...+..++............|...+                            
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------  236 (418)
T TIGR00889       185 AKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLH----------------------------  236 (418)
T ss_pred             CccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHH----------------------------
Confidence            11111 00 00   000 00     011111111111111111111122222                            


Q ss_pred             ccccccccc--------cCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhc--chH
Q psy11734        508 TYTTLDAKF--------DWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHS--GPV  577 (817)
Q Consensus       508 ~~~~~~~~~--------~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~--s~~  577 (817)
                             |.        |++.++.+...++..++..+++++.|++.||+|||+++..+.++.+++.++....++.  +.+
T Consensus       237 -------~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~  309 (418)
T TIGR00889       237 -------EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYA  309 (418)
T ss_pred             -------HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHH
Confidence                   22        2345778999999999999999999999999999999999999998887777664300  112


Q ss_pred             HHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHH----HHHH-HHHHHHH
Q psy11734        578 SMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAEN----GVLS-ALPFLIM  652 (817)
Q Consensus       578 ~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~----~~~~-~~~~~~~  652 (817)
                      .+++.+++.|++                             ........+.+..+.  .++..-    +... ....++.
T Consensus       310 ~l~l~~~l~g~~-----------------------------~~~~~~~~~~~i~~~--~p~~~~g~~~g~~~~~~~~lg~  358 (418)
T TIGR00889       310 LLFLSMIVYGCA-----------------------------FDFFNISGSVFVEKE--VPVHIRASAQGLFTLMCNGFGS  358 (418)
T ss_pred             HHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHhhHH
Confidence            233333333332                             222222334444443  233222    2332 3345788


Q ss_pred             HHHHHHHHHHHhhhhcc
Q psy11734        653 WLVSMSSSALADYLIVR  669 (817)
Q Consensus       653 ~ig~~~~g~l~dr~g~~  669 (817)
                      .+|.+++|++.|+.|.+
T Consensus       359 ~iGp~l~G~l~~~~g~~  375 (418)
T TIGR00889       359 LLGYILSGVMVEKMFAY  375 (418)
T ss_pred             HHHHHHHHHHHHHhccc
Confidence            99999999999998753

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>KOG0255|consensus

Probab=99.58  E-value=4e-13  Score=155.35  Aligned_cols=255  Identities=17%  Similarity=0.143  Sum_probs=181.0

Q ss_pred             CCCCCCCCCceeeeccccccc---ccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHH
Q psy11734        493 SCFPNANGNHTVVSKTYTTLD---AKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTP  569 (817)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~  569 (817)
                      .+..|.+++.++.+....++.   +.++.+.....+..+++.+|..+|++++|+++||+|||+++..++++..++.++++
T Consensus        87 ~~~~~~~~~~~~~~~~~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a  166 (521)
T KOG0255|consen   87 VIVICLDGWVYDYGSSVYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTA  166 (521)
T ss_pred             ccccccceeEecCCCCcccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHH
Confidence            346778888877776555444   45567889999999999999999999999999999999999999999999999999


Q ss_pred             HhhhcchHHHHHHHHHHhhhcc----------------------------------------------------------
Q psy11734        570 LIAHSGPVSMTVLRFLEGVGED----------------------------------------------------------  591 (817)
Q Consensus       570 ~a~~~s~~~l~~~R~l~Gig~~----------------------------------------------------------  591 (817)
                      +++  |++.+++.|+++|++.+                                                          
T Consensus       167 ~a~--~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~  244 (521)
T KOG0255|consen  167 FAP--NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITRDWRWLFWIISIPS  244 (521)
T ss_pred             HhC--cHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            999  99999999999999999                                                          


Q ss_pred             ----------------------------------c-----C-----------------------chhHHhhcCHhHHHHH
Q psy11734        592 ----------------------------------L-----E-----------------------TPWAAILSSLPVWSLI  609 (817)
Q Consensus       592 ----------------------------------~-----~-----------------------~~~~~~l~~~~~~~~~  609 (817)
                                                        +     .                       ..+.++++.|+.....
T Consensus       245 ~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~  324 (521)
T KOG0255|consen  245 GLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRT  324 (521)
T ss_pred             HHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHH
Confidence                                              0     0                       0112233333221111


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHH
Q psy11734        610 ISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLP  689 (817)
Q Consensus       610 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~  689 (817)
                      +... ..+..+.+..+.-.+....+|.+..   ......+.....+....+...||.|||..          ...+..+.
T Consensus       325 ~~~~-~~~~~~~~~y~gl~~~~~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~----------~~~~~~~~  390 (521)
T KOG0255|consen  325 LYLL-FIWFVFSLVYYGLSLNVSGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPP----------LFLSLFLA  390 (521)
T ss_pred             HHHH-HHHHHHhHHHHhhhhhhhhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHH----------HHHHHHHH
Confidence            1111 1111122222222222222344432   33344445777777888999999986643          46778887


Q ss_pred             HHHHHHHHhhcCchH--HHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734        690 GVGALAASYVGCNTS--MVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  763 (817)
Q Consensus       690 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~  763 (817)
                      .++++...+......  .......++.++.+..+........|..| ..|..+.+..+....+++.++|.+.-....
T Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~  467 (521)
T KOG0255|consen  391 GIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ  467 (521)
T ss_pred             HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            888888777653333  45555566666666667777889999999 679999999999999999999999765544

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.57  E-value=1.8e-14  Score=163.39  Aligned_cols=259  Identities=15%  Similarity=0.128  Sum_probs=192.3

Q ss_pred             ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhhe
Q psy11734          3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCIL   82 (817)
Q Consensus         3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~   82 (817)
                      ++.|++.+...|.-.+++.+..|+||..++.++.+...+++.++||.++|.++. ..|=.++|.++++.-++.... ...
T Consensus       111 fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva-~~G~~~~f~inalsfl~~i~~-l~~  188 (524)
T PF05977_consen  111 FLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVA-FFGAAAAFLINALSFLISILA-LLR  188 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHH
Confidence            456888888899999999999999999999999999999999999999999999 889999999987644443333 222


Q ss_pred             eccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHH
Q psy11734         83 CFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTA  162 (817)
Q Consensus        83 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (817)
                      .|.+++ ++..+ +|+  ...+                                                          
T Consensus       189 ~~~~~~-~~~~~-~e~--~~~~----------------------------------------------------------  206 (524)
T PF05977_consen  189 WKPPPP-PSSLP-RER--FFSA----------------------------------------------------------  206 (524)
T ss_pred             cccccc-ccccc-hhh--hhhh----------------------------------------------------------
Confidence            222111 11111 110  0000                                                          


Q ss_pred             HHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccc
Q psy11734        163 LLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENG  242 (817)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag  242 (817)
                                                   .+..++.+.++|......+..++.+.....+...+|.+.++.+|.++...|
T Consensus       207 -----------------------------l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yG  257 (524)
T PF05977_consen  207 -----------------------------LREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYG  257 (524)
T ss_pred             -----------------------------HHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHH
Confidence                                         122355566677766666666666655556667799999999999999999


Q ss_pred             hhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccc
Q psy11734        243 VLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYA  322 (817)
Q Consensus       243 ~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~  322 (817)
                      ++....++|.++|+++.+++.+|.++++.          +..+.+..+++++.+.+.+ +.+...+.+++.+.+......
T Consensus       258 ll~a~~gvGai~Gal~~~~l~~~~~~~~l----------v~~~~~~~a~~~~~lal~~-~~~~~~~~l~l~G~~~~~~~~  326 (524)
T PF05977_consen  258 LLLAAFGVGAILGALLLPRLRRRLSSRRL----------VLLASLLFALALLLLALSP-SFWLALIALFLAGAAWIIANS  326 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCcchh----------hHHHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999887775          5666666677666666654 445555555555555555555


Q ss_pred             cccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        323 SIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       323 ~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ..++..+...| +.+|+++++.+++...+..+|..+.|.+.|..
T Consensus       327 ~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~  370 (524)
T PF05977_consen  327 SLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF  370 (524)
T ss_pred             HHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            55566666555 78999999999999999999999999998876

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.57  E-value=8.5e-13  Score=139.21  Aligned_cols=383  Identities=16%  Similarity=0.136  Sum_probs=251.2

Q ss_pred             HhhchhhHHHHhhCC---cccc----cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH
Q psy11734        222 ISTDLPKYMSEVIGL---SVAE----NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL  294 (817)
Q Consensus       222 ~~~~~p~~l~~~~g~---s~~~----ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~  294 (817)
                      +.+++|.|+++..+-   ++.+    .++......+...+-+++.|.++|+.|+||.         .......+..++.+
T Consensus        34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~---------~~~~f~~i~i~~~~  104 (438)
T COG2270          34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKK---------FFGFFTAIGIISTF  104 (438)
T ss_pred             eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcch---------HHHHHHHHHHHHHH
Confidence            457788898875433   5443    3455666777788889999999999998886         35555666666667


Q ss_pred             hhhccCC--ChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccc--eecccccccC
Q psy11734        295 AASYVGC--NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVG--FLTQNIISIN  369 (817)
Q Consensus       295 ~~~~~~~--~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g--~l~~~~~~~~  369 (817)
                      .+.+.++  +++.....+.+...+........++...++.+ ++.+..+++....+++|+.+.-.+.-  .+......  
T Consensus       105 ~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~--  182 (438)
T COG2270         105 LLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTG--  182 (438)
T ss_pred             HHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccc--
Confidence            7766665  34555566666666666666667888887776 56788888777777877765444321  11000000  


Q ss_pred             CCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchh
Q psy11734        370 PIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPAR  449 (817)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (817)
                                           ....    +.+  .++++.+.-|.++.+.++-.++-.+-.++..++..+.         
T Consensus       183 ---------------------~~~~----l~~--l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~---------  226 (438)
T COG2270         183 ---------------------ITII----LLG--LPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKI---------  226 (438)
T ss_pred             ---------------------eeEE----eec--cCccccccchhHHHHHHHHHHHHHhHHHhcccccccc---------
Confidence                                 0000    000  1111222344444444443333222222221111100         


Q ss_pred             HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHH
Q psy11734        450 YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSA  529 (817)
Q Consensus       450 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~  529 (817)
                                                                                       ..+..+         
T Consensus       227 -----------------------------------------------------------------~~~~~~---------  232 (438)
T COG2270         227 -----------------------------------------------------------------SSPPPT---------  232 (438)
T ss_pred             -----------------------------------------------------------------cccchH---------
Confidence                                                                             000000         


Q ss_pred             HHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHH
Q psy11734        530 FYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLI  609 (817)
Q Consensus       530 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~  609 (817)
                                                         .+..      ++-.             ...+++++.+++.+....
T Consensus       233 -----------------------------------~l~~------g~k~-------------L~~t~k~i~~~~~i~~FL  258 (438)
T COG2270         233 -----------------------------------ALRN------GFKE-------------LKSTFKEIRGRKNLVLFL  258 (438)
T ss_pred             -----------------------------------HHHH------HHHH-------------HHHHHHHHhcccchHHHH
Confidence                                               0000      1110             124567888889999999


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHH
Q psy11734        610 ISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLP  689 (817)
Q Consensus       610 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~  689 (817)
                      ++.+++.-+..+.......|-.+.+|++..+...+.....+.+++|++++|++.||+|.|+++          ..+.++.
T Consensus       259 iA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl----------~~~lvi~  328 (438)
T COG2270         259 IARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVL----------MIGLVIL  328 (438)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceee----------hHHHHHH
Confidence            999999999999999999999989999999999999999999999999999999999999775          3555555


Q ss_pred             HHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccc
Q psy11734        690 GVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLL  768 (817)
Q Consensus       690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~  768 (817)
                      .+.++...+.. ..........+.+.+.+..++..-++..+..| ++-++..|+.+..+...+.++|.+.+.+.+.+++ 
T Consensus       329 ~~~~~~~~~~~-~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~-  406 (438)
T COG2270         329 SIAALYLIFLE-GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS-  406 (438)
T ss_pred             HHHHHHHHHcc-ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc-
Confidence            54444444443 23333333344555555556666677777777 7799999999999999999999999999999865 


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734        769 EWRVVFWIMFLTLFISNVFFVLFG  792 (817)
Q Consensus       769 ~~~~~~~~~~~~~~i~~~~~~~~~  792 (817)
                       -+..+..+.++..++.+...+.+
T Consensus       407 -~r~g~~~i~vll~iGl~~L~~v~  429 (438)
T COG2270         407 -SRAGVLSIIVLLLIGLLLLLRVK  429 (438)
T ss_pred             -hhhHHHHHHHHHHhhHhhEEeec
Confidence             67888888888888887776653

>TIGR00788 fbt folate/biopterin transporter

Probab=99.56  E-value=8.7e-14  Score=157.69  Aligned_cols=370  Identities=12%  Similarity=0.009  Sum_probs=218.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHh---hcCcccchhhHHHH
Q psy11734        205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFI---ARDILSRTNVRKVF  281 (817)
Q Consensus       205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g---~r~~~~~~~~~~~~  281 (817)
                      ...+...++..+.. +.....++.++++.+|.|..+.+.+.....+...+-.+ +|.++||++   +||        +..
T Consensus        28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rR--------r~~   97 (468)
T TIGR00788        28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTK--------RWY   97 (468)
T ss_pred             HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccc--------hHH
Confidence            44555567777777 77778888899988999999998888888888888555 999999995   222        123


Q ss_pred             HHHHhHHH-HHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCc---hhHHHHHHHhhhhhcccccccc
Q psy11734        282 ATLGAVLP-GVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNF---SGTIMALSNGLGCVSGMVAPLT  357 (817)
Q Consensus       282 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~---~g~a~g~~~~~~~lg~~~~~~i  357 (817)
                      +..+.++. .+.+..+...++........+.+..++....-........|..+|+   .+...++....+.+|..+++.+
T Consensus        98 l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l  177 (468)
T TIGR00788        98 LVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLL  177 (468)
T ss_pred             HHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHH
Confidence            44444444 2333333322222223332444444444444444455555544433   3334445555566899999999


Q ss_pred             cceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734        358 VGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE  437 (817)
Q Consensus       358 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~  437 (817)
                      .|.+.+..                                             +|+..|++.+++.++..+...+.+ |+
T Consensus       178 ~G~l~~~~---------------------------------------------~~~~~f~~~a~l~ll~~~~~~~~~-E~  211 (468)
T TIGR00788       178 GGPLLDKT---------------------------------------------LTRILFLITAALLLLQLFVSNLSK-ER  211 (468)
T ss_pred             HHHHHHhc---------------------------------------------CcchHHHHHHHHHHHHHHHHHhcc-cc
Confidence            99887764                                             589999999888887755444443 32


Q ss_pred             cccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccccc
Q psy11734        438 VQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFD  517 (817)
Q Consensus       438 ~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (817)
                      +....++                                ..+            .+|..                  ...
T Consensus       212 ~~~~~~~--------------------------------~~~------------~~~~~------------------~~~  229 (468)
T TIGR00788       212 RAFVRPR--------------------------------IGT------------YLEMN------------------MAL  229 (468)
T ss_pred             ccccccc--------------------------------ccc------------cchhh------------------hhh
Confidence            1100000                                000            00000                  000


Q ss_pred             CChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhH
Q psy11734        518 WDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWA  597 (817)
Q Consensus       518 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~  597 (817)
                      .+...                                            .....+  .                 ..+.+
T Consensus       230 ~~~~~--------------------------------------------~~~~~~--~-----------------~~~l~  246 (468)
T TIGR00788       230 LTLGV--------------------------------------------LANVKV--Q-----------------ILGLR  246 (468)
T ss_pred             hhhhH--------------------------------------------HHHHHH--H-----------------HHHHH
Confidence            00000                                            000000  0                 01234


Q ss_pred             HhhcCHhHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccch
Q psy11734        598 AILSSLPVWSLIISEVG-HDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTN  676 (817)
Q Consensus       598 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~  676 (817)
                      +.+++|.++...+..++ +... .+.....-.+.++.+|+++.+.|......+++.+++....+++.+|++.|+.+    
T Consensus       247 ~~l~~~~i~~~l~fifl~~~~~-~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l----  321 (468)
T TIGR00788       247 GAIQLLEIAKPLIFIFLSYANL-PGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLF----  321 (468)
T ss_pred             HHHhcHHHHHHHHHHHHHHhhc-CCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHH----
Confidence            55677887765554444 2211 11111100123345899999999999999999999999999998888866543    


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhh---------cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHH
Q psy11734        677 VRKVFATLGAVLPGVGALAASYV---------GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGL  746 (817)
Q Consensus       677 ~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~  746 (817)
                            .++.++.+++.+.....         ..+.+.......+..+..+....+.....++..| +++|+..++.+++
T Consensus       322 ------~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~  395 (468)
T TIGR00788       322 ------GVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASI  395 (468)
T ss_pred             ------HHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHH
Confidence                  35555554444332110         0122223333344455555556666677777777 7799999999999


Q ss_pred             HHHHHhHHHHHHHHhhcCCc
Q psy11734        747 GCVSGMVAPLTVGFLTQNKT  766 (817)
Q Consensus       747 ~~~g~~i~p~~~g~~~~~~g  766 (817)
                      .++|..+++.++|.+.+..|
T Consensus       396 ~~lg~~v~~~~gg~l~~~~g  415 (468)
T TIGR00788       396 LHLGSSVSGFLGVLLMETIG  415 (468)
T ss_pred             HHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999998875

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.54  E-value=2.2e-13  Score=147.62  Aligned_cols=284  Identities=14%  Similarity=0.102  Sum_probs=193.3

Q ss_pred             HHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh-HHHHHHHHHHH
Q psy11734        455 MGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT-QGVILSAFYYG  533 (817)
Q Consensus       455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~~~  533 (817)
                      +|..+++  .--|.+++.+.|++.+                                   |+|+|++| .|.+.++|..+
T Consensus        32 lC~fGF~--~e~R~n~s~a~p~L~~-----------------------------------elglT~~qv~G~I~s~F~ys   74 (511)
T TIGR00806        32 LCFYGFM--AQFRPGESFITPYLLT-----------------------------------VLNFTEETVTNEIIPVLPYS   74 (511)
T ss_pred             HHHHHHH--HHhhchHHHHHHHHHH-----------------------------------HcCCCHHHhcchHHHHHHHH
Confidence            4444433  3458888999988888                                   99999999 99999999999


Q ss_pred             HHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc----------------------
Q psy11734        534 YILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED----------------------  591 (817)
Q Consensus       534 ~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~----------------------  591 (817)
                      |++++++.|.++||+|.|+++.++++.+++.+++.++++  ++..|.+.|++.|+++|                      
T Consensus        75 Yal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~rat  152 (511)
T TIGR00806        75 HLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--SVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAA  152 (511)
T ss_pred             HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence            999999999999999999999999999999999999999  99999999999999999                      


Q ss_pred             ------------------------------------------------------------cCc-----------------
Q psy11734        592 ------------------------------------------------------------LET-----------------  594 (817)
Q Consensus       592 ------------------------------------------------------------~~~-----------------  594 (817)
                                                                                  ...                 
T Consensus       153 si~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~  232 (511)
T TIGR00806       153 AYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGP  232 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCC
Confidence                                                                        000                 


Q ss_pred             ---h------------------hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHH
Q psy11734        595 ---P------------------WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMW  653 (817)
Q Consensus       595 ---~------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~  653 (817)
                         .                  +++..+||++..-.+=+.+..++++-+..|....-++..+-...--|..-++..+.++
T Consensus       233 ~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga  312 (511)
T TIGR00806       233 GGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGA  312 (511)
T ss_pred             ccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHH
Confidence               0                  0112344444333333345556666666666666655433112245556667778888


Q ss_pred             HHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhc-cccC
Q psy11734        654 LVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNP-IDLS  732 (817)
Q Consensus       654 ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  732 (817)
                      +..+..|++-.++.+-        -...+.+..++.+..++++...+ +.|......++......+..+....-+ ..+.
T Consensus       313 ~~a~~ag~~~~~w~~~--------~~l~l~v~s~~~~gll~~m~~t~-~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~  383 (511)
T TIGR00806       313 ITSFIAGFVNIRWARW--------SKLLIAVVSAIQAGLVFWMSQSH-DIWVLYVTYVLFRGIYQFLVPIATFQIASSLS  383 (511)
T ss_pred             HHHHHHHhhcCCchhh--------HHHHHHHHHHHHHHHhhhhhccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8999999986554321        12233344444444455555543 778888888888887777666655433 3344


Q ss_pred             CCchHHHHHHHHHHHHHHHhHHHHHH----HHhhcCCcc-ccHHHHHHHHHHHHHHHHH
Q psy11734        733 PNFSGTIMALSNGLGCVSGMVAPLTV----GFLTQNKTL-LEWRVVFWIMFLTLFISNV  786 (817)
Q Consensus       733 ~~~~g~~~g~~~~~~~~g~~i~p~~~----g~~~~~~g~-~~~~~~~~~~~~~~~i~~~  786 (817)
                      .+.-|...|+++++.-+-..+-..+.    |.-.|...- .-|...|.+++.+.++..+
T Consensus       384 ~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~  442 (511)
T TIGR00806       384 KELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAG  442 (511)
T ss_pred             ccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehhhHHHHHHHHHHHHHH
Confidence            46679999998887766665554442    221111100 1255667777766666544

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>TIGR01272 gluP glucose/galactose transporter

Probab=99.54  E-value=6.6e-13  Score=142.08  Aligned_cols=165  Identities=13%  Similarity=0.066  Sum_probs=127.7

Q ss_pred             HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy11734        598 AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQV--IGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRT  675 (817)
Q Consensus       598 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~  675 (817)
                      +.+|+|+++...+..+++.....+...|.+.|+++.  +|+++++++...+.+..+.++|+++++++.||+++++.+   
T Consensus       135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l---  211 (310)
T TIGR01272       135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL---  211 (310)
T ss_pred             hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH---
Confidence            356678888888888998889999999999999864  689999999999999999999999999999999987643   


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHH
Q psy11734        676 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAP  755 (817)
Q Consensus       676 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p  755 (817)
                             ..+..+..++.++....+ +. .....+.+.+++.+..+|...+...+..|++.+++.++. ..+.+|+++.|
T Consensus       212 -------~~~~~l~~~~~~l~~~~~-~~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P  281 (310)
T TIGR01272       212 -------AFNAFLAVLLSIGAALTH-GY-VAMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVP  281 (310)
T ss_pred             -------HHHHHHHHHHHHHHHHcC-CH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHH
Confidence                   244444444444443332 22 233345566777778888888888888887778888885 67789999999


Q ss_pred             HHHHHhhcCCccccHHHHHHHHH
Q psy11734        756 LTVGFLTQNKTLLEWRVVFWIMF  778 (817)
Q Consensus       756 ~~~g~~~~~~g~~~~~~~~~~~~  778 (817)
                      .+.|.+.|..|   .+.+|++..
T Consensus       282 ~l~G~lad~~g---~~~a~~v~~  301 (310)
T TIGR01272       282 LLQGSLADCLG---IQLAFALPV  301 (310)
T ss_pred             HHHHHHHHhcc---chHHHHHHH
Confidence            99999999876   556665433

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>KOG0569|consensus

Probab=99.52  E-value=4.7e-14  Score=155.22  Aligned_cols=289  Identities=15%  Similarity=0.131  Sum_probs=191.2

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhh-hhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSG-LIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~-~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      |++.|+..|.......-++.|..|++.||........+..+|..++..++. .+......|++.+....+++++..+...
T Consensus       123 R~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~  202 (485)
T KOG0569|consen  123 RLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLP  202 (485)
T ss_pred             HHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999999987764 3333267899999999888877766665


Q ss_pred             heeccCCCCCCCCCH-H-HHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHH
Q psy11734         81 ILCFNDPKSHPYISE-K-ERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGF  158 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (817)
                      ++    ||++|+.-. + +.++.+++++.....++++-+.+                                       
T Consensus       203 ~~----PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e---------------------------------------  239 (485)
T KOG0569|consen  203 FL----PESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIE---------------------------------------  239 (485)
T ss_pred             cC----CCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHH---------------------------------------
Confidence            54    556654322 1 11111111111100000000000                                       


Q ss_pred             HHHHHHHhhhhcccCcCCchhhhHHhhhccC--cccCchHHHHhhchhH-----HHHHHHHHHHHHHHHHHhhchhhHHH
Q psy11734        159 LSTALLTLLTPLVAHSGPVSMTVLRFLEGVG--EDLKTPWAAILYSLPV-----WSLIISEVGHDYGLYLISTDLPKYMS  231 (817)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~-----~~~~i~~~~~~~~~~~~~~~~p~~l~  231 (817)
                                           -..+..++.+  +++..+++++++||+.     ..+.+...-...+.+....|...+++
T Consensus       240 ---------------------~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~  298 (485)
T KOG0569|consen  240 ---------------------EMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFK  298 (485)
T ss_pred             ---------------------HHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHH
Confidence                                 0001111111  1245568899988764     44445555566677778888888888


Q ss_pred             HhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc---CCCh---hH
Q psy11734        232 EVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV---GCNT---SM  305 (817)
Q Consensus       232 ~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~  305 (817)
                      + .|++..++-+.....++.+.+.++.+.++.||.|||+.          ...+..++.+..+.+...   .+..   ..
T Consensus       299 ~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpL----------ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~  367 (485)
T KOG0569|consen  299 T-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPL----------LLISLSLMAVALLLMSIALFLSNSFGSWLS  367 (485)
T ss_pred             H-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence            7 49999999999999999999999999999999999986          556655555544444322   1111   11


Q ss_pred             --HHHHHHHHHHHhhhc-cccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        306 --VAIFFTIGMAFMGFC-YASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       306 --~~~~~~l~~~~~g~~-~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                        .+..+.+..+....+ .|..+-...|+.| +.|+++.++...+..+...+-...+..+.+..
T Consensus       368 y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~  431 (485)
T KOG0569|consen  368 YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI  431 (485)
T ss_pred             HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence              122333333333333 3444777788776 79999999999998877776666655555544

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.51  E-value=5.2e-12  Score=136.38  Aligned_cols=187  Identities=19%  Similarity=0.205  Sum_probs=155.2

Q ss_pred             HHHHhhchh-HHHHHHHHHHHHHHHHHHhhchhhHHHHhhC----CcccccchhhhhhHHHHHHHHhhhHHHHHH-Hhhc
Q psy11734        196 WAAILYSLP-VWSLIISEVGHDYGLYLISTDLPKYMSEVIG----LSVAENGVLSALPFLIMWLVSMSSSALADF-FIAR  269 (817)
Q Consensus       196 ~~~l~~~~~-~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g----~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r  269 (817)
                      .+..+++|+ ++.++..-+.-.+++|++...+-.|+....+    +|.+++.-+...+.--.=....++|+++|| +|+|
T Consensus        13 ~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~   92 (498)
T COG3104          13 EMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR   92 (498)
T ss_pred             ccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence            456677664 7889999999999999999999999987777    999998888888777777889999999999 5888


Q ss_pred             CcccchhhHHHHHHHHhHHHHHHHHhhhccC-CChhHHHHHHHHHHHHhhhccccccccccccCCC---chhHHHHHHHh
Q psy11734        270 DILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPN---FSGTIMALSNG  345 (817)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~---~~g~a~g~~~~  345 (817)
                      +.          +.+|.+++.++-+.+.... .......+.+.+...+.|..-++......|..|+   +|-.++++.+.
T Consensus        93 ~t----------I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~  162 (498)
T COG3104          93 RT----------IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYM  162 (498)
T ss_pred             HH----------HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEE
Confidence            86          8899999999988888774 3444555555555678888888888888786653   37788899999


Q ss_pred             hhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHH
Q psy11734        346 LGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVI  425 (817)
Q Consensus       346 ~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~  425 (817)
                      ..++|+.++|.+.+.+.++.                                             +|+..|-..++-+..
T Consensus       163 ~iNiGsl~~p~i~~~~~~~~---------------------------------------------g~~~gF~~aavGm~~  197 (498)
T COG3104         163 GINIGSLIAPIITGLLAINY---------------------------------------------GWHVGFGLAAVGMII  197 (498)
T ss_pred             EeehHHHHHHHHHHHHHHhh---------------------------------------------CHHHHHHHHHHHHHH
Confidence            99999999999999988875                                             699999999999999


Q ss_pred             hhhhheeecccc
Q psy11734        426 SNVFFVLFGSGE  437 (817)
Q Consensus       426 ~~~~~~~~~~~~  437 (817)
                      +++.+.+.+|.-
T Consensus       198 gl~~f~~~~r~~  209 (498)
T COG3104         198 GLVIFLLGRRHV  209 (498)
T ss_pred             HHHHHHHccchh
Confidence            999988877553

>KOG0253|consensus

Probab=99.50  E-value=4.8e-13  Score=136.80  Aligned_cols=280  Identities=13%  Similarity=0.164  Sum_probs=181.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      +|.+.|+|.|+ .|...++-.+..|..+|.+.+-.. ..+.+|.++...+.-..++ .+||||-....+.+..+.. ..+
T Consensus       172 f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~-~~gwr~~l~~~~~pl~~~a-~f~  247 (528)
T KOG0253|consen  172 FRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS-NFGWRYLLFTSSTPLMFAA-RFL  247 (528)
T ss_pred             HHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHhHHHHHH-HHH
Confidence            47889999998 999999999999999999988887 9999999999999998998 8999999888874444433 334


Q ss_pred             heeccCCCCCC-CCCHHHHhHhhhhcccccc---------------ccccccccCccccchhhhhhhhchhhcccccccc
Q psy11734         81 ILCFNDPKSHP-YISEKERKYLLDSIGAAER---------------RKDAKFDWDERTQGVILSSFYYGYTLTHIPGGIL  144 (817)
Q Consensus        81 ~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (817)
                      +.+||.|+-.- .-++.+..+..+++.++..               .++++-|.+++.+                     
T Consensus       248 ~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~---------------------  306 (528)
T KOG0253|consen  248 VWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKS---------------------  306 (528)
T ss_pred             hhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhh---------------------
Confidence            44444443110 1112222222222211100               0011111111000                     


Q ss_pred             ccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhh---chhHHHHHHHHHHHHHHHHH
Q psy11734        145 SQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILY---SLPVWSLIISEVGHDYGLYL  221 (817)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~i~~~~~~~~~~~  221 (817)
                            +                                    ..+.......+++.   .+..+......+.+...+|+
T Consensus       307 ------~------------------------------------a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg  344 (528)
T KOG0253|consen  307 ------S------------------------------------AAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYG  344 (528)
T ss_pred             ------c------------------------------------cccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHH
Confidence                  0                                    00111112233332   11234444555566667777


Q ss_pred             HhhchhhHHHHhh-------------------CCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHH
Q psy11734        222 ISTDLPKYMSEVI-------------------GLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFA  282 (817)
Q Consensus       222 ~~~~~p~~l~~~~-------------------g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~  282 (817)
                      ........+|...                   ..+..+--.-.....++.+.|.++.+++.||+|||+.          +
T Consensus       345 ~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT----------M  414 (528)
T KOG0253|consen  345 SVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT----------M  414 (528)
T ss_pred             HHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH----------H
Confidence            7665555555321                   1111111222445678889999999999999999997          7


Q ss_pred             HHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccccc
Q psy11734        283 TLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTV  358 (817)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~  358 (817)
                      ....++..++.+.+.... +.....+.++.+-++....++..+++..|++| +.|+++.|....+.++|+++.|.++
T Consensus       415 al~l~~f~iflfll~~c~-~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA  490 (528)
T KOG0253|consen  415 ALSLILFGIFLFLLTTCK-TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA  490 (528)
T ss_pred             HHHHHHHHHHHHHHHHhc-CcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence            888888887777776654 33445555566667777888889999999999 6899999999999999999999998

>KOG0254|consensus

Probab=99.50  E-value=5.5e-13  Score=153.51  Aligned_cols=249  Identities=17%  Similarity=0.179  Sum_probs=174.0

Q ss_pred             hhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------
Q psy11734        521 RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---------  591 (817)
Q Consensus       521 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---------  591 (817)
                      .+.+++.+.+.++..+++++.|+++|++|||+.+.++.+.+.++++++++++  |+++++++|+++|+|.|         
T Consensus        89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~piy  166 (513)
T KOG0254|consen   89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAPVY  166 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcchhh
Confidence            6779999999999999999999999999999999999999999999999999  99999999999999999         


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~  246 (513)
T KOG0254|consen  167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAK  246 (513)
T ss_pred             HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHH
Confidence                                                                                            


Q ss_pred             -------c--Cc------------------------hhHHhhc----CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q psy11734        592 -------L--ET------------------------PWAAILS----SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI  634 (817)
Q Consensus       592 -------~--~~------------------------~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~  634 (817)
                             .  ..                        .++++++    ++..+...+..+....+......|.+.+++.. 
T Consensus       247 ~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-  325 (513)
T KOG0254|consen  247 RSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-  325 (513)
T ss_pred             HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-
Confidence                   0  00                        0111111    11233444455555556666777888888774 


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhc----C-------ch
Q psy11734        635 GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVG----C-------NT  703 (817)
Q Consensus       635 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----~-------~~  703 (817)
                      |.+... .......++...++..++.++.||+|||+.+          +.+...+.++++++....    .       ..
T Consensus       326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll----------l~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~  394 (513)
T KOG0254|consen  326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL----------LFGAAGMSICLVILAVVGVFALYYPNSSKGAG  394 (513)
T ss_pred             CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHhHHHHHHHHHHHHHHHHHhccCCCcccchh
Confidence            655433 4455567788888888889999999987654          466666666666555321    1       01


Q ss_pred             HHHHHHHHHH-HHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHH
Q psy11734        704 SMVAICFTIG-MAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTL  781 (817)
Q Consensus       704 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~  781 (817)
                      +..+....+. ..+.....+..+...+|.+| +.|+++.++........+.+-....-...+..+   ....|...+..+
T Consensus       395 ~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~---~~~~f~~f~~~~  471 (513)
T KOG0254|consen  395 WLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG---IGGTFGYFGGIC  471 (513)
T ss_pred             HHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccchHHHHHHHH
Confidence            2333333222 22223445666678899999 889999999999998877776655555544432   234445555555


Q ss_pred             HHHHH
Q psy11734        782 FISNV  786 (817)
Q Consensus       782 ~i~~~  786 (817)
                      .+...
T Consensus       472 ~~~~~  476 (513)
T KOG0254|consen  472 LLSLI  476 (513)
T ss_pred             HHHHH
Confidence            55444

>KOG4686|consensus

Probab=99.48  E-value=5.8e-13  Score=131.24  Aligned_cols=268  Identities=14%  Similarity=0.117  Sum_probs=180.4

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCc------chh---HHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASW------ANV---FYIFGAI   71 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gW------r~~---f~i~~~~   71 (817)
                      .|++-|+|+-..-..-.+++..||..||.+.++|+..+..-+|+..-..+.+++.+ +.+=      |..   ....+..
T Consensus       142 GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~-~~~~~~~~~ghT~LG~~l~~~~~  220 (459)
T KOG4686|consen  142 GRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYD-TMGRMFPGVGHTLLGLWLCFEVK  220 (459)
T ss_pred             hheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHH-HHHHhcccchHHHHHHHHHHHHH
Confidence            38999999998888899999999999999999999999999999998888888887 3220      111   1111111


Q ss_pred             HHHHHhhhhheeccCCCCCCCCCHH-HHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCC
Q psy11734         72 AVLWFAFWCILCFNDPKSHPYISEK-ERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGG  150 (817)
Q Consensus        72 ~~i~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (817)
                      +.....+....       ..+.++. |+....++-.. .  ++                                     
T Consensus       221 tc~~slical~-------lg~~D~rAerilh~e~g~~-G--e~-------------------------------------  253 (459)
T KOG4686|consen  221 TCKQSLICALS-------LGLSDDRAERILHLEEGFL-G--EE-------------------------------------  253 (459)
T ss_pred             HHHHHHHHHHH-------hhhhhhHHHHHHhhhcCcc-c--CC-------------------------------------
Confidence            11111111110       1111111 11100000000 0  00                                     


Q ss_pred             ccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734        151 KHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYM  230 (817)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l  230 (817)
                                                               ++.....- -.|.+|...+..++.+...+.+....|.++
T Consensus       254 -----------------------------------------pkLtdv~~-f~ppfw~~~iicv~yyva~fPFi~lg~~fF  291 (459)
T KOG4686|consen  254 -----------------------------------------PKLTDVNT-FYPPFWVLVIICVLYYVAWFPFITLGPMFF  291 (459)
T ss_pred             -----------------------------------------cccccccc-cCccHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence                                                     01111111 257899999999999999999999999999


Q ss_pred             HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHH
Q psy11734        231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFF  310 (817)
Q Consensus       231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (817)
                      ++.+|+|+..++-+.+.......+.+++.|.++||.|++..+         +..+.+...++=..+.++.-+++..+.++
T Consensus       292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~w---------v~~a~~~tl~~H~~l~Ft~lsPy~~m~~l  362 (459)
T KOG4686|consen  292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWW---------VASACILTLLGHSGLFFTFLSPYTSMTFL  362 (459)
T ss_pred             HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehh---------HHHHHHHHHHHhhhHHhhhccHHHHHHHH
Confidence            999999999999999999889999999999999999999763         55555555555555555443444443333


Q ss_pred             HHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccC
Q psy11734        311 TIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISIN  369 (817)
Q Consensus       311 ~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~  369 (817)
                      .  ........+.++....-++.++.|+++|..+..+++|-++.|.++|.+.|..|+|+
T Consensus       363 G--LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~  419 (459)
T KOG4686|consen  363 G--LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYD  419 (459)
T ss_pred             h--hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchh
Confidence            2  22222222333444444555799999999999999999999999999999987543

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.46  E-value=6.2e-16  Score=175.60  Aligned_cols=286  Identities=16%  Similarity=0.249  Sum_probs=176.6

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc---CcchhHHHHhhhHHHHHh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA---SWANVFYIFGAIAVLWFA   77 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~---gWr~~f~i~~~~~~i~~~   77 (817)
                      .|+++|++.|...+.+..++.|..|+++|++..++.+....+|..++..++..+.+ ..   +||+.+++..+++++..+
T Consensus       108 ~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~~~~Wr~~~~~~~~~~l~~~~  186 (451)
T PF00083_consen  108 GRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY-YSDNWGWRILLIFGAIPSLLVLL  186 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc
Confidence            59999999999999999999999999999999999999999999999988876654 44   499999999888776655


Q ss_pred             hhhheeccCCCCCCCCCHHHHhHhhhhcccc-ccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734         78 FWCILCFNDPKSHPYISEKERKYLLDSIGAA-ERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL  156 (817)
Q Consensus        78 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (817)
                      .. .++   ||++++.-.+++++..++..+. ...+..+.+.++...                                 
T Consensus       187 ~~-~~~---pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~---------------------------------  229 (451)
T PF00083_consen  187 LR-FFL---PESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKA---------------------------------  229 (451)
T ss_pred             cc-ccc---ccccceeccccccccccccccccccccccccccccccc---------------------------------
Confidence            44 445   4455554333332211111110 000111111111000                                 


Q ss_pred             HHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchh----HHHHHHHH-HHHHHHHHHHhhchhhHHH
Q psy11734        157 GFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLP----VWSLIISE-VGHDYGLYLISTDLPKYMS  231 (817)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~i~~-~~~~~~~~~~~~~~p~~l~  231 (817)
                                                 ..+. +++.+..+++++++++    ........ +....+.+....+.|.+++
T Consensus       230 ---------------------------~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~  281 (451)
T PF00083_consen  230 ---------------------------EKKE-SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE  281 (451)
T ss_pred             ---------------------------cccc-ccccceeeeecccccccccccccccccccccccccccccccccccccc
Confidence                                       0000 0001134666777643    22222222 2223344455666777766


Q ss_pred             HhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhh---c-cCCC----h
Q psy11734        232 EVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAAS---Y-VGCN----T  303 (817)
Q Consensus       232 ~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~----~  303 (817)
                      + .|.+..  -.......+...++.+++..+.||+|||+.          ...+..++.++...+.   . ..++    .
T Consensus       282 ~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~----------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (451)
T PF00083_consen  282 N-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKL----------LIIGLLLMAICSLILGIIFFLGVSSSSWWS  348 (451)
T ss_pred             c-cccccc--cccccccccccccccccccccccccccccc----------cccccccccccccccccccccccccccccc
Confidence            5 466666  333444556677788888899999999986          5566666555554442   1 1111    1


Q ss_pred             hHHHHHHHHHHHHhh-hccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        304 SMVAIFFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       304 ~~~~~~~~l~~~~~g-~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ........+...... ...+....+..|..| +.|+++.|+.+.++++++.+++.+...+.++.
T Consensus       349 ~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~  412 (451)
T PF00083_consen  349 ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL  412 (451)
T ss_pred             cccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            222222222222222 233444677788888 79999999999999999999999888777664

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>KOG2615|consensus

Probab=99.45  E-value=8.7e-13  Score=136.16  Aligned_cols=239  Identities=17%  Similarity=0.125  Sum_probs=171.1

Q ss_pred             ccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc----
Q psy11734        516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED----  591 (817)
Q Consensus       516 ~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~----  591 (817)
                      .+.+..-.|.+.|+|.+...++++.+|.++||||||.++.++++..++..++-+++.  |+..+++.|++.|+..+    
T Consensus        63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--~F~afv~aR~l~Gi~kgnl~v  140 (451)
T KOG2615|consen   63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--NFAAFVLARFLGGIFKGNLSV  140 (451)
T ss_pred             ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhccCchHH
Confidence            334566689999999999999999999999999999999999999999999999999  99667777999999999    


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       141 ~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~r  220 (451)
T KOG2615|consen  141 IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLR  220 (451)
T ss_pred             HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccch
Confidence                                                                                            


Q ss_pred             cCc----hh-------------H-----HhhcCHh-------HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHH
Q psy11734        592 LET----PW-------------A-----AILSSLP-------VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENG  642 (817)
Q Consensus       592 ~~~----~~-------------~-----~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~  642 (817)
                      +++    +.             .     ..+||++       .....+.++.++..+-+.....+.+-.+.+|+++.+.|
T Consensus       221 k~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G  300 (451)
T KOG2615|consen  221 KRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG  300 (451)
T ss_pred             hhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence            000    00             0     1233332       23334455555555555555555555667899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhh
Q psy11734        643 VLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYA  722 (817)
Q Consensus       643 ~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (817)
                      .+.+..++.+.+.+....+..||.+..        -+.....+..++...++++.... .+........+-.+......+
T Consensus       301 ~vl~~tGl~m~~~ql~~~~~l~~~~~~--------~~a~l~~~l~~~vP~~llls~~~-~~~~l~~~s~l~sf~~A~~vt  371 (451)
T KOG2615|consen  301 KVLSTTGLLMLVIQLALVPILPRYKGN--------IKAVLLFSLLLIVPAFLLLSLAR-TPVVLYLGSTLKSFSTASVVT  371 (451)
T ss_pred             eeeehhhHHHHHHHHhccccccccccc--------hhhHHHHHHHHHHHHHHHHhccc-cchhhhHHHHHHHHHHHHhhH
Confidence            999988888888888877777776621        01122344444444444444443 333444444444444445555


Q ss_pred             hhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy11734        723 SIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK  765 (817)
Q Consensus       723 ~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~  765 (817)
                      ..........| ++||++.|+....+.++-++||.+.|.+....
T Consensus       372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws  415 (451)
T KOG2615|consen  372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS  415 (451)
T ss_pred             HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence            56666677777 78999999999999999999999999877653

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.43  E-value=2.5e-12  Score=146.18  Aligned_cols=313  Identities=10%  Similarity=-0.006  Sum_probs=174.4

Q ss_pred             cccccCCcccccchhhhhhhhccCCCC---cchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNE---RSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAF   78 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~---rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~   78 (817)
                      |.++|+|.|...|...++++|++|++|   |+++.+++..+.++|..+||++++++.+ ..|||+.|++.++..++. ++
T Consensus       109 ~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~-~~g~~~~f~~~~~~~~~~-~l  186 (475)
T TIGR00924       109 LGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE-NYGYHVGFNLAAVGMVIG-LL  186 (475)
T ss_pred             HHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHH-HH
Confidence            678899999999999999999999865   8999999999999999999999999999 889999999987544333 33


Q ss_pred             hhheec----cCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccch
Q psy11734         79 WCILCF----NDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTL  154 (817)
Q Consensus        79 ~~~~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (817)
                      .+++.+    +.|++++..++++++........               .......+.         .++..++-.... .
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~---------~~~~~~~~~~~~-~  241 (475)
T TIGR00924       187 TFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLAL---------------LAALALVFF---------CAWLMHHVVIAN-I  241 (475)
T ss_pred             HHHHcccccccCCCCCCCcchhhhhhHHHHHHH---------------HHHHHHHHH---------HHHHHhccHHHH-H
Confidence            333322    22211111111111000000000               000000000         000000000000 0


Q ss_pred             hHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhh
Q psy11734        155 GLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVI  234 (817)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~  234 (817)
                      .......+  .. ...               .....+++....+-.|...+...++...+....+.-..+.+|.+.++..
T Consensus       242 ~~~~~~~~--~~-~~~---------------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~  303 (475)
T TIGR00924       242 LLMTVTLA--VI-IFF---------------FRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNM  303 (475)
T ss_pred             HHHHHHHH--HH-HHH---------------HHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc
Confidence            00000000  00 000               0000011111111122333444455555545555555566777776643


Q ss_pred             CCcccc----cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc--------cCCC
Q psy11734        235 GLSVAE----NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY--------VGCN  302 (817)
Q Consensus       235 g~s~~~----ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  302 (817)
                      +.+...    .+++.....+..++..++..++-.|..||...   .....-...|+++.++++..+..        ...+
T Consensus       304 ~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~---~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s  380 (475)
T TIGR00924       304 HHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKD---PTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTS  380 (475)
T ss_pred             cccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCC---CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccC
Confidence            433222    56777777777777777766655566554210   00111135666666666555542        1235


Q ss_pred             hhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734        303 TSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT  362 (817)
Q Consensus       303 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~  362 (817)
                      .++..+...+...+-....+.......+..| +.||+.+|+......+|..+++.+.....
T Consensus       381 ~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~  441 (475)
T TIGR00924       381 PWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGA  441 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6666666667777777778888888878776 68999999999999988888888766443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.41  E-value=2.9e-16  Score=178.36  Aligned_cols=261  Identities=19%  Similarity=0.276  Sum_probs=177.8

Q ss_pred             ChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhc-chHHHHHHHHHHhhhcc------
Q psy11734        519 DERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHS-GPVSMTVLRFLEGVGED------  591 (817)
Q Consensus       519 s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~-s~~~l~~~R~l~Gig~~------  591 (817)
                      ++.+.+++.+...+|..+|+++.|.++||+|||+.+.++.++..+++++.++++.+ +++.+.++|+++|++.|      
T Consensus        44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~  123 (451)
T PF00083_consen   44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS  123 (451)
T ss_pred             hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            67789999999999999999999999999999999999999999999999999733 68899999999999998      


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~  203 (451)
T PF00083_consen  124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGR  203 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccc
Confidence                                                                                            


Q ss_pred             ---------------------------c------CchhHHhhcCHh----HHHHHHHHHHHHH-HHHHHHhhHHHHHHHH
Q psy11734        592 ---------------------------L------ETPWAAILSSLP----VWSLIISEVGHDY-GFYLISSDLPKYMSQV  633 (817)
Q Consensus       592 ---------------------------~------~~~~~~~l~~~~----~~~~~~~~~~~~~-~~~~~~~~~p~~l~~~  633 (817)
                                                 .      +..++++++++.    .........+... +.+....+.|..+++ 
T Consensus       204 ~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-  282 (451)
T PF00083_consen  204 DEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-  282 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-
Confidence                                       0      001233444422    2222222222222 233444555555544 


Q ss_pred             hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHH---h-hcCc----hHH
Q psy11734        634 IGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAAS---Y-VGCN----TSM  705 (817)
Q Consensus       634 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~-~~~~----~~~  705 (817)
                      .+.+..  -.......+...++.+++.++.||+|||+.+          ..+....+++.+.+.   . ...+    ...
T Consensus       283 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~----------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (451)
T PF00083_consen  283 AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLL----------IIGLLLMAICSLILGIIFFLGVSSSSWWSIL  350 (451)
T ss_pred             cccccc--ccccccccccccccccccccccccccccccc----------ccccccccccccccccccccccccccccccc
Confidence            566665  2223344567777888888999999999765          355555555555443   1 1112    122


Q ss_pred             HHHHHHHHHHHHh-hhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHH
Q psy11734        706 VAICFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFI  783 (817)
Q Consensus       706 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i  783 (817)
                      .+....+.....+ ...+..+....|.+| +.|+++.|+....+.+++.++|.+...+.++.+   ....+.+.++++++
T Consensus       351 ~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~---~~~~~~i~~~~~~i  427 (451)
T PF00083_consen  351 SIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG---GWGVFLIFAGVCLI  427 (451)
T ss_pred             cceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccchhhHHHHHH
Confidence            2222222222222 344555688899999 789999999999999999999999988887764   23556666666666


Q ss_pred             HHHHHHHhccCc
Q psy11734        784 SNVFFVLFGSGE  795 (817)
Q Consensus       784 ~~~~~~~~~~~~  795 (817)
                      +.+..+++.++.
T Consensus       428 ~~i~~~~~lpET  439 (451)
T PF00083_consen  428 AIIFVYFFLPET  439 (451)
T ss_pred             HHhheeEEEeeC
Confidence            666665554433

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.38  E-value=1.6e-11  Score=137.61  Aligned_cols=178  Identities=16%  Similarity=0.236  Sum_probs=136.3

Q ss_pred             cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcccccccchhhH
Q psy11734        601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYL-IVRDILSRTNVRK  679 (817)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-g~~~~~~~~~~r~  679 (817)
                      +.|.++.++...+.....+|++..++|.|+++.+|++..+++...........++.+++|+++||+ |||+.+       
T Consensus         7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i-------   79 (493)
T PRK15462          7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV-------   79 (493)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH-------
Confidence            345677778888888999999999999999999999999999999999999999999999999999 988653       


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-C--chHHHHHHHHHHHHHHHhHHHH
Q psy11734        680 VFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-N--FSGTIMALSNGLGCVSGMVAPL  756 (817)
Q Consensus       680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~g~~~g~~~~~~~~g~~i~p~  756 (817)
                         ..+.++..++.+++.....+.........+...+.+...+...+...|.+| +  .|.++.++.+...++|+.++|.
T Consensus        80 ---liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~  156 (493)
T PRK15462         80 ---MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI  156 (493)
T ss_pred             ---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence               466666666655554322122222222223333444444555677788887 3  5999999999999999999999


Q ss_pred             HHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        757 TVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       757 ~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      +.+++.+..|   |+..|.+.++..+++.+.+...
T Consensus       157 l~g~L~~~~G---w~~~F~iaaigm~l~li~~~~~  188 (493)
T PRK15462        157 ACGYAQEEYS---WAMGFGLAAVGMIAGLVIFLCG  188 (493)
T ss_pred             HHHHHHhhhC---hHHHHHHHHHHHHHHHHHHHHh
Confidence            9999988865   9999998877776666665543

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.36  E-value=6.5e-12  Score=141.48  Aligned_cols=255  Identities=17%  Similarity=0.224  Sum_probs=194.6

Q ss_pred             CcccccchhhhhhhhccC-CCCcchhHHHhHhhhhhhHHHHhhhhhhhcc----cc--cCcchhHHHHhhhHHHHHhhhh
Q psy11734          8 PKGTTFPALCTLLAQWSP-PNERSFMTALVFAGVQLGSVLATFCSGLIMS----FT--ASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         8 g~g~~~~~~~~~i~~~~p-~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~----~~--~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      +.......-.++..|..+ +|||.+..+.-.....+|..+...+.+.+.+    ..  .+|++..++.+++.++..++.+
T Consensus       116 ~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~  195 (428)
T PF13347_consen  116 AYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITF  195 (428)
T ss_pred             hhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhh
Confidence            334445566778889998 4799999999999999998777777766664    11  1799999999999998888888


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +..||++++.+   +++                ++                                             
T Consensus       196 ~~~ke~~~~~~---~~~----------------~~---------------------------------------------  211 (428)
T PF13347_consen  196 FFVKERSVEVT---EQE----------------KK---------------------------------------------  211 (428)
T ss_pred             heeeecccccc---ccc----------------cc---------------------------------------------
Confidence            88777211110   000                00                                             


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                   ...++.+++++|||++.......++............+.|.++..|.+ ..
T Consensus       212 -----------------------------~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~  261 (428)
T PF13347_consen  212 -----------------------------ISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GL  261 (428)
T ss_pred             -----------------------------cccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hh
Confidence                                         001334778999999999999999988888888888888888887777 55


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC-CChhHHHHHHHHHHHHhhh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g~  319 (817)
                      .+.......++..++.++.++++||+|+|+.          ...+..+..++.+.+.+.+ ++.+...+...+.+.+.+.
T Consensus       262 ~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~  331 (428)
T PF13347_consen  262 ISIFMLIFFVASIVGSPLWGRLSKRFGKKKV----------YIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGA  331 (428)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHccceee----------hhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcc
Confidence            6666777889999999999999999999997          7777777777777666655 4666667777777777777


Q ss_pred             ccccccccccccCC--------CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        320 CYASIRVNPIDLSP--------NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       320 ~~~~~~~~~~~~~p--------~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      ......+...|+.+        +..|..+|+.++...++.++++.+.+.+.+..|
T Consensus       332 ~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G  386 (428)
T PF13347_consen  332 FFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG  386 (428)
T ss_pred             cccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence            77777777776554        346999999999999999999999999987765

>KOG2563|consensus

Probab=99.35  E-value=2.1e-11  Score=129.36  Aligned_cols=305  Identities=13%  Similarity=0.013  Sum_probs=220.2

Q ss_pred             CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734        444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ  523 (817)
Q Consensus       444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  523 (817)
                      +..++||.++.++++..+.+.+....+++...+...                                   -++ +.+..
T Consensus        38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~-----------------------------------~Yg-s~~~~   81 (480)
T KOG2563|consen   38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNS-----------------------------------FYG-SSSAA   81 (480)
T ss_pred             ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHH-----------------------------------Hhc-chHHH
Confidence            457889999999999999999999988877655555                                   667 77778


Q ss_pred             HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhh----cchH--HHHHHHHHHhhhcc------
Q psy11734        524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAH----SGPV--SMTVLRFLEGVGED------  591 (817)
Q Consensus       524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~----~s~~--~l~~~R~l~Gig~~------  591 (817)
                      -|...+|++.+....+++-++.||+|-|....++..+..++..+-..+..    .+++  ....+..+.+.+.-      
T Consensus        82 ~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lP  161 (480)
T KOG2563|consen   82 DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLP  161 (480)
T ss_pred             HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccc
Confidence            89999999999999999999999999999999999999999999888751    2344  45566666665555      


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       162 skiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t  241 (480)
T KOG2563|consen  162 SKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT  241 (480)
T ss_pred             cHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence                                                                                            


Q ss_pred             ---------c----CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHH
Q psy11734        592 ---------L----ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMS  658 (817)
Q Consensus       592 ---------~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~  658 (817)
                               .    ..+.++.++++++....+.+......+++..+.+-.-+.. .|++...+|+......+++++|..+
T Consensus       242 Pps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~  320 (480)
T KOG2563|consen  242 PPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALA  320 (480)
T ss_pred             CCchhHhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHH
Confidence                     0    1124578899999999999998888888888777765655 4788888999999999999999999


Q ss_pred             HHHHHhhhhcccccccchhhHHHHHHHHHHHHHH-HHHHHhhc--CchHHHHHHHHHHHHHHhhhhhhhhhhc-cccCCC
Q psy11734        659 SSALADYLIVRDILSRTNVRKVFATLGAVLPGVG-ALAASYVG--CNTSMVAICFTIGMAFMGFCYASIRVNP-IDLSPN  734 (817)
Q Consensus       659 ~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  734 (817)
                      .|.+.||.++.+..         +........++ +.+.....  ...+.......+.+++.....|.-.-.. ...+|.
T Consensus       321 ~gii~Dktk~fk~~---------~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv  391 (480)
T KOG2563|consen  321 SGIIADKTKKFKLT---------TLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPV  391 (480)
T ss_pred             HHhhhhhhhhHHHH---------HHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeecccc
Confidence            99999999865432         12223333333 22222221  1223333333444444444555444333 446788


Q ss_pred             chHHHHHHHHHHHHHHHhHHHHHHHHhhcCCc-cccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734        735 FSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT-LLEWRVVFWIMFLTLFISNVFFVLFGSG  794 (817)
Q Consensus       735 ~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g-~~~~~~~~~~~~~~~~i~~~~~~~~~~~  794 (817)
                      .=++..|+.+..+++-+.+-..+.+...+..+ ++++...-+.+...+.++..+..+.++.
T Consensus       392 ~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~  452 (480)
T KOG2563|consen  392 AEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD  452 (480)
T ss_pred             CCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence            88899999999999999999999999888764 2223334444555555555555555443

>PTZ00207 hypothetical protein; Provisional

Probab=99.34  E-value=4.1e-12  Score=144.59  Aligned_cols=394  Identities=12%  Similarity=0.055  Sum_probs=230.6

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|+|.+..++.+...+.+||| ++||+++|+.....++|+++.+++...+..  .+|++.|++.+++++++.++++.
T Consensus       127 r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~  203 (591)
T PTZ00207        127 NGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIV  203 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHh
Confidence            788999999999999999999996 789999999999999999875555554444  47999999999999999999999


Q ss_pred             eeccCCCCCC-----CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734         82 LCFNDPKSHP-----YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL  156 (817)
Q Consensus        82 ~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (817)
                      +++++|....     +.+++++.  .++.......+++.-.|. -.....+.+....|...+   ..+.+..+-.+..-.
T Consensus       204 ~vr~p~~~~~~~~~~~~~~~~~~--~~~~~~~~y~~q~~p~~~-f~~~~~i~~~l~~yl~~~---~~~~~~~~~~~~~~~  277 (591)
T PTZ00207        204 FMRLPPFHLTGYQEKHLDEEEKA--QRLMRKGVYLKQKAPMWR-FVYGFVILIILIVFLPLQ---GALVAYLKLGSNFKV  277 (591)
T ss_pred             heeCCcchhhcccccCCCHHHHH--HHhhhhhhhhhcCCCcee-hhhHHHHHHHHHHHHHHH---HHHHHHhcccHHHHH
Confidence            8887653221     11222221  111111011111100000 001111222222222222   222221111111111


Q ss_pred             HHHHHHH-HH-----hhhhcccCcCC--c------h---hh------------hHHhhhccCcccCchHHHHhhchhHHH
Q psy11734        157 GFLSTAL-LT-----LLTPLVAHSGP--V------S---MT------------VLRFLEGVGEDLKTPWAAILYSLPVWS  207 (817)
Q Consensus       157 ~~~~~~~-~~-----~~~~~~~~~~~--~------~---~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~  207 (817)
                      .....++ +.     +.++...-...  .      .   .-            .....+....+..+++++.+++..+|.
T Consensus       278 ~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wl  357 (591)
T PTZ00207        278 GFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWC  357 (591)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHH
Confidence            1111111 11     11111110000  0      0   00            000000000111125678888999999


Q ss_pred             HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc--cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHH
Q psy11734        208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE--NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLG  285 (817)
Q Consensus       208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~--ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~  285 (817)
                      .++..+|..+.-..+..-+-++.+..-|++..+  ...+....++++.+|++..|..+....+|+. .++-.|...+.+.
T Consensus       358 l~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~-~~r~prt~~l~~~  436 (591)
T PTZ00207        358 LLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRA-EDRVPITIALFIP  436 (591)
T ss_pred             HHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhcc-ccccchhHHHHHH
Confidence            999999999998888888888888743773333  3336788999999999999999944444431 0112345556666


Q ss_pred             hHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhccccc-ccccceeccc
Q psy11734        286 AVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVA-PLTVGFLTQN  364 (817)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~-~~i~g~l~~~  364 (817)
                      .+ +.++.+.++...+ .....+..++.+.+.|...+......+|++.|+-|+-+-+.....-+|+.+- -.++|.+.|+
T Consensus       437 ~~-~~~~~lll~~~~p-~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~  514 (591)
T PTZ00207        437 SV-CIITMLTLFLTLP-KAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQ  514 (591)
T ss_pred             HH-HHHHHHHHHHHCC-ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            66 4444444444332 2455566666777888888888999999888988888877777777777665 4467777776


Q ss_pred             ccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734        365 IISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ  439 (817)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~  439 (817)
                      -..-         .+.       ..|..                .+=++..|.++++++..+.+..+.+.-+.++
T Consensus       515 ea~k---------~~~-------~~C~G----------------~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~  557 (591)
T PTZ00207        515 QADK---------LGQ-------DVCTE----------------RVCVVMPLAFLLGLSFLAFITSTYVHLQYRR  557 (591)
T ss_pred             HHhh---------CCC-------CeeCC----------------ceeeHhHHHHHHHHHHHHHHHHhheeeehHH
Confidence            4210         000       00110                1238999999999999999887666655443

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.34  E-value=3e-11  Score=135.75  Aligned_cols=285  Identities=16%  Similarity=0.128  Sum_probs=206.9

Q ss_pred             chhhhhhhhccCCCCc--------------------------chhHHHhHhhhhhhHHHHhhhhhhhcc-------cccC
Q psy11734         14 PALCTLLAQWSPPNER--------------------------SFMTALVFAGVQLGSVLATFCSGLIMS-------FTAS   60 (817)
Q Consensus        14 ~~~~~~i~~~~p~~~r--------------------------g~~~gi~~~~~~~G~~ig~~~~~~l~~-------~~~g   60 (817)
                      ..-.+++-|..+++++                          ++..+.-.+...+|..+...+.-.+..       ...+
T Consensus       145 vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~  224 (477)
T PF11700_consen  145 VFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWA  224 (477)
T ss_pred             HHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchh
Confidence            3345667777777777                          899999888888998888887665543       0223


Q ss_pred             cchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhcccc
Q psy11734         61 WANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIP  140 (817)
Q Consensus        61 Wr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (817)
                      =|..+.+.+..-++..+..++.+|++|+.++..+.+..  ......                                  
T Consensus       225 ~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~--~~~g~~----------------------------------  268 (477)
T PF11700_consen  225 IRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSY--LRFGFK----------------------------------  268 (477)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhH--HHHHHH----------------------------------
Confidence            48888888888788888888888887653221111110  000000                                  


Q ss_pred             ccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHH
Q psy11734        141 GGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLY  220 (817)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~  220 (817)
                                                                        +....++++.|+|+.....++.++..-+..
T Consensus       269 --------------------------------------------------~l~~t~k~~~~~~~~~~fLia~~l~~dg~~  298 (477)
T PF11700_consen  269 --------------------------------------------------RLWRTFKEIRKLRQLFLFLIAYFLYSDGVN  298 (477)
T ss_pred             --------------------------------------------------HHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence                                                              013346778889999999999999999999


Q ss_pred             HHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhc--CcccchhhHHHHHHHHhHHH-HHHHHhhh
Q psy11734        221 LISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIAR--DILSRTNVRKVFATLGAVLP-GVGALAAS  297 (817)
Q Consensus       221 ~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  297 (817)
                      ++......|.++++|++..+...+.....+...+|+++.|++.||+|.|  +.          +....... .+.+..+.
T Consensus       299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~----------l~~~l~~~~~i~~~g~~  368 (477)
T PF11700_consen  299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRT----------LLISLILWIIIPLYGLF  368 (477)
T ss_pred             HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH----------HHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998  43          22222222 22223222


Q ss_pred             ------ccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCC
Q psy11734        298 ------YVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINP  370 (817)
Q Consensus       298 ------~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~  370 (817)
                            ....+.+..++.-.+.+..+|...+...+...++-| ++.+.-+|+.+..+...+.+||.+.|.+.|.+|    
T Consensus       369 G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg----  444 (477)
T PF11700_consen  369 GFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG----  444 (477)
T ss_pred             HhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence                  012244445555555666666666666666666555 789999999999999999999999999999875    


Q ss_pred             CCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        371 IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                                                              +.|..+....++.+++.++......++.
T Consensus       445 ----------------------------------------~~r~g~~~l~~lf~~gl~ll~~v~~~~g  472 (477)
T PF11700_consen  445 ----------------------------------------SQRYGFLFLLVLFLIGLILLFFVDVEKG  472 (477)
T ss_pred             ----------------------------------------CchhHHHHHHHHHHHHHHHHhhccchhh
Confidence                                                    4778888888888888888766655443

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.32  E-value=1.1e-10  Score=122.51  Aligned_cols=343  Identities=16%  Similarity=0.167  Sum_probs=230.1

Q ss_pred             HhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCC
Q psy11734        222 ISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGC  301 (817)
Q Consensus       222 ~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (817)
                      ..--+-+.+++.++.+..+++++......+..++++..|++.+|+|.|+.          +..|..++++++.++.-..+
T Consensus        31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~g----------i~lgL~l~avg~~lF~pAa~  100 (422)
T COG0738          31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAG----------IVLGLLLYAVGAALFWPAAS  100 (422)
T ss_pred             cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHH----------HHHHHHHHHHHHHHHhhhhh
Confidence            33334446677799999999999999999999999999999999999986          89999999998888753322


Q ss_pred             --ChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCc
Q psy11734        302 --NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFS  378 (817)
Q Consensus       302 --~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~  378 (817)
                        ++......+.+.+.+.+.--+..+.++..+.| +..+.-+.+...+..+|++++|.+.+.+...-.            
T Consensus       101 ~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~------------  168 (422)
T COG0738         101 SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGV------------  168 (422)
T ss_pred             hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh------------
Confidence              45555555566666666666667888888776 577888899999999999999999998887520            


Q ss_pred             cchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc-ccC--CC------Cchh
Q psy11734        379 GTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY-WNE--SI------LPAR  449 (817)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~--~~------~~~~  449 (817)
                                  ......+......  ......++..|.+.+...++..+.....+..+.++ .++  +.      +..+
T Consensus       169 ------------~~~~~~~~~~~~~--~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~  234 (422)
T COG0738         169 ------------ALTMSAAQILAIK--GADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQ  234 (422)
T ss_pred             ------------hhccCHHHHHHHH--HHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccccchHHHHHh
Confidence                        0000000000000  01134588889988888877776665555222111 111  11      0111


Q ss_pred             HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHH
Q psy11734        450 YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSA  529 (817)
Q Consensus       450 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~  529 (817)
                      ..-+....++.|+..-.+...+..++...+                                  +..|.++.+.....+.
T Consensus       235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~----------------------------------~~~g~~~~~aa~~~s~  280 (422)
T COG0738         235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLE----------------------------------ELLGLNEQQAAYYLSF  280 (422)
T ss_pred             ChHHHHHHHHHHHHHhHHHHHHHHHHHHHH----------------------------------hcCCccHHHHHHHHHH
Confidence            112333344444444455555555555444                                  0378899999999999


Q ss_pred             HHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHH
Q psy11734        530 FYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLI  609 (817)
Q Consensus       530 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~  609 (817)
                      ++.+..+|..+...+..|+...|.+.+..+...+-.+..++++  +...                          ++.+.
T Consensus       281 ~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~--g~v~--------------------------~~~l~  332 (422)
T COG0738         281 FWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIG--GVVA--------------------------LYALF  332 (422)
T ss_pred             HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc--ChHH--------------------------HHHHH
Confidence            9999999999999999999999999988888877777777877  4221                          11122


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHH---HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy11734        610 ISEVGHDYGFYLISSDLPKYMS---QVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVR  669 (817)
Q Consensus       610 ~~~~~~~~~~~~~~~~~p~~l~---~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~  669 (817)
                      +..++.       ....|+.+.   +.++...+..+.......+++.+..++.|+++|+.|.-
T Consensus       333 ~ig~F~-------simfPTIfslal~~l~~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~  388 (422)
T COG0738         333 LIGLFN-------SIMFPTIFSLALKNLGEHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQ  388 (422)
T ss_pred             HHHHHh-------HHHHHHHHHHHHhccCccccccceeeeeheecchHHHHHHHHHHHhhhhH
Confidence            222111       122344433   22343334455666677789999999999999999853

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.28  E-value=1.1e-10  Score=133.50  Aligned_cols=181  Identities=15%  Similarity=0.206  Sum_probs=135.6

Q ss_pred             HhhcCHh-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcccccccc
Q psy11734        598 AILSSLP-VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADY-LIVRDILSRT  675 (817)
Q Consensus       598 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~g~~~~~~~~  675 (817)
                      +.+|+|+ ++.++...++...++|++..++|.|+++.+|+|..+++..............+++|+++|| +|||+.+   
T Consensus        15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~---   91 (500)
T PRK09584         15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI---   91 (500)
T ss_pred             hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH---
Confidence            4567764 8888888899999999999999999999999999998887777666666666899999999 5988654   


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCC---chHHHHHHHHHHHHHHHh
Q psy11734        676 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPN---FSGTIMALSNGLGCVSGM  752 (817)
Q Consensus       676 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~  752 (817)
                             ..+.++..++..+..+...+.........+.+.+.+...+...+...+.+|+   .+..+.++.+...++|+.
T Consensus        92 -------~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~  164 (500)
T PRK09584         92 -------MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF  164 (500)
T ss_pred             -------HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH
Confidence                   4666666666666655432333333334445555555556666777777763   245678888999999999


Q ss_pred             HHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        753 VAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       753 i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      ++|.+.|++.|+.|   |+..|.+.++..+++.+.+...
T Consensus       165 ~gp~i~g~l~~~~g---~~~~F~i~~i~~~i~~i~~~~~  200 (500)
T PRK09584        165 FSMLATPWLAAKYG---WSVAFALSVVGMLITVVNFAFC  200 (500)
T ss_pred             HHHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999865   9999998887666666555443

>KOG0254|consensus

Probab=99.28  E-value=1.7e-11  Score=141.25  Aligned_cols=280  Identities=13%  Similarity=0.087  Sum_probs=175.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~~~~   79 (817)
                      .|+++|+|.|........+++|.-|++.||...+..+....+|..++..++....+ . .+||..+++..+.+++..+. 
T Consensus       148 GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~-~~~~Wr~~~~~~~i~~~~~~~~-  225 (513)
T KOG0254|consen  148 GRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK-VYAGWRIPLGLALIPAVILALG-  225 (513)
T ss_pred             HHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc-CCccHHHHHHHHHHHHHHHHHH-
Confidence            49999999999999999999999999999999999999999999999555555443 2 48999999988888888777 


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      .++.||.|+   +.-++++....++........+   +|+.....-.                                 
T Consensus       226 ~~~~pesp~---~L~~~g~~~~a~~~l~~l~g~~---~~~~~~~~~~---------------------------------  266 (513)
T KOG0254|consen  226 MLFLPESPR---WLIEKGRLEEAKRSLKRLRGLS---PEDVEVELEL---------------------------------  266 (513)
T ss_pred             HHhCCCChH---HHHHcCChHHHHHHHHHHhCCC---CcchHHHHHH---------------------------------
Confidence            676765543   3222211111111100000000   1111000000                                 


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCc-hHHHHh----hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhh
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKT-PWAAIL----YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVI  234 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~----~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~  234 (817)
                                          .........+..... .+.+++    +++.++...+..+.+..+.....+|.+.+++.. 
T Consensus       267 --------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-  325 (513)
T KOG0254|consen  267 --------------------LKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-  325 (513)
T ss_pred             --------------------HHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-
Confidence                                000000011111111 233333    344456777777777788888899999998874 


Q ss_pred             CCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc----CC-------Ch
Q psy11734        235 GLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV----GC-------NT  303 (817)
Q Consensus       235 g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~  303 (817)
                      |.+... .......++.+.++..++..+.||.|||+.          +..+...+.+++..+...    ..       ..
T Consensus       326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~l----------ll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~  394 (513)
T KOG0254|consen  326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKL----------LLFGAAGMSICLVILAVVGVFALYYPNSSKGAG  394 (513)
T ss_pred             CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHHhHHHHHHHHHHHHHHHHHhccCCCcccchh
Confidence            666444 555666788888999999999999999986          666666666666555422    10       11


Q ss_pred             hHHHHHHHHHH-HHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccc
Q psy11734        304 SMVAIFFTIGM-AFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMV  353 (817)
Q Consensus       304 ~~~~~~~~l~~-~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~  353 (817)
                      +..+....+.. .+.....+..+....|..| +.|+++.++...+..+.+.+
T Consensus       395 ~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~  446 (513)
T KOG0254|consen  395 WLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFL  446 (513)
T ss_pred             HHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHH
Confidence            22222222222 2333334445678889888 78999999999888865543

>PRK09848 glucuronide transporter; Provisional

Probab=99.27  E-value=1e-11  Score=140.87  Aligned_cols=162  Identities=11%  Similarity=0.042  Sum_probs=121.2

Q ss_pred             hHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccc
Q psy11734        195 PWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSR  274 (817)
Q Consensus       195 ~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~  274 (817)
                      .+++++|||.++...+..++.....+....+.|.|+++.+|.+....++...+..++.+++.++.+++.||+++|+.   
T Consensus       220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~---  296 (448)
T PRK09848        220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNT---  296 (448)
T ss_pred             HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH---
Confidence            36789999999999998888888888888888999998888887766666666677888999999999999998875   


Q ss_pred             hhhHHHHHHHHhHHHHHHHHhhhccCC-ChhHHHHHHHHHHHHhhhccccccccccccCC--------CchhHHHHHHHh
Q psy11734        275 TNVRKVFATLGAVLPGVGALAASYVGC-NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNG  345 (817)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p--------~~~g~a~g~~~~  345 (817)
                             ...+..+..++...+.+.+. +.+.......+.+.+.+...+...+...|..|        ++.|..+|+.++
T Consensus       297 -------~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~  369 (448)
T PRK09848        297 -------FLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSF  369 (448)
T ss_pred             -------HHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHH
Confidence                   66676666666655554432 23333333344444455555555555555443        246999999999


Q ss_pred             hhhhcccccccccceeccccc
Q psy11734        346 LGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       346 ~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      .+.+|.++++.+.|.+.+..|
T Consensus       370 ~~klg~aig~~i~g~~l~~~G  390 (448)
T PRK09848        370 TRKCGQAIGGSIPAFILGLSG  390 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999988764

>PRK09669 putative symporter YagG; Provisional

Probab=99.26  E-value=2e-11  Score=138.26  Aligned_cols=250  Identities=10%  Similarity=0.027  Sum_probs=160.0

Q ss_pred             cccchhhhhhhhcc-CCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------cccCcchhHHHHhhhHHHHHhhhhhee
Q psy11734         11 TTFPALCTLLAQWS-PPNERSFMTALVFAGVQLGSVLATFCSGLIMS------FTASWANVFYIFGAIAVLWFAFWCILC   83 (817)
Q Consensus        11 ~~~~~~~~~i~~~~-p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------~~~gWr~~f~i~~~~~~i~~~~~~~~~   83 (817)
                      .....-.++.+|+. +++||.+..++-.....+|..+++.+...+..      ...||+..+.+.+++.++..++.++..
T Consensus       125 ~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~  204 (444)
T PRK09669        125 AINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMT  204 (444)
T ss_pred             hhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCe
Confidence            34444557888887 45889998888888888887777665544332      135899999998888877776666666


Q ss_pred             ccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHH
Q psy11734         84 FNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTAL  163 (817)
Q Consensus        84 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (817)
                      ||++++++    +++               .                                                 
T Consensus       205 ~e~~~~~~----~~~---------------~-------------------------------------------------  216 (444)
T PRK09669        205 KERYTPEV----DNS---------------S-------------------------------------------------  216 (444)
T ss_pred             EEecCCCC----cCC---------------C-------------------------------------------------
Confidence            65422110    000               0                                                 


Q ss_pred             HHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccch
Q psy11734        164 LTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGV  243 (817)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~  243 (817)
                                                 ..++..++++|||+++...+..++............+.|.+...+ +++..+.
T Consensus       217 ---------------------------~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~  268 (444)
T PRK09669        217 ---------------------------SVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATL  268 (444)
T ss_pred             ---------------------------CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHH
Confidence                                       012346788999999888777776655554444444444443332 2233344


Q ss_pred             hhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-CCChhHHHHHHHHHHHHhhhccc
Q psy11734        244 LSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAIFFTIGMAFMGFCYA  322 (817)
Q Consensus       244 ~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~g~~~~  322 (817)
                      ......+..+++.+++++++||+|+|+.          ...+..+..+....+... .++.....+...+.+.+.+...+
T Consensus       269 ~~~~~~i~~ii~~~~~~~l~~r~gk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  338 (444)
T PRK09669        269 FLVTGMIAGLFGALLSERLLGKFDRVRA----------FKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTP  338 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhChHHH----------HHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHH
Confidence            4555667888899999999999999875          444444333322222222 33444444444555556666666


Q ss_pred             cccccccccCC--------CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        323 SIRVNPIDLSP--------NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       323 ~~~~~~~~~~p--------~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      ...+...|..+        +..|..+|..++...+|.++|+.+.|.+.|..|
T Consensus       339 ~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G  390 (444)
T PRK09669        339 LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD  390 (444)
T ss_pred             HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            66666665432        345788999999999999999999999998875

>KOG0252|consensus

Probab=99.26  E-value=5.8e-12  Score=133.23  Aligned_cols=318  Identities=14%  Similarity=0.109  Sum_probs=209.0

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------cc--------cCcchhHH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS------FT--------ASWANVFY   66 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------~~--------~gWr~~f~   66 (817)
                      .|++.|+|.|+-+|.+.++.+|...+++||...+...+..+.|...|.+++-.+..      ..        .=||-.|-
T Consensus       150 ~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~g  229 (538)
T KOG0252|consen  150 FRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFG  229 (538)
T ss_pred             HHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHH
Confidence            49999999999999999999999999999999999999999999999888876664      01        13999999


Q ss_pred             HHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhcccccccccc
Q psy11734         67 IFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQ  146 (817)
Q Consensus        67 i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (817)
                      +..++++++...-+..    ||++++....++ +..+..++...+...  +.++.+..                      
T Consensus       230 lg~vpa~~~ly~Rl~M----~Et~~Y~al~~~-~~~~a~~d~~k~~~~--~~~~~~~~----------------------  280 (538)
T KOG0252|consen  230 LGAVPALLVLYFRLKM----PETARYTALVSK-KLKQAAGDMKKVLSV--DIEAESTA----------------------  280 (538)
T ss_pred             HHHHHHHHHHHhhhcC----CcchhHHHHhhc-CHhhhhhcccccccc--ccchhhcc----------------------
Confidence            8877776665444443    555544311110 000000000000000  00000000                      


Q ss_pred             ccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcc-cCc---hHHHHhhc---hhHHHHHHHHHHHHHHH
Q psy11734        147 KFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGED-LKT---PWAAILYS---LPVWSLIISEVGHDYGL  219 (817)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~l~~~---~~~~~~~i~~~~~~~~~  219 (817)
                                                              ....+ +++   .+.+.+..   +.........|.....+
T Consensus       281 ----------------------------------------~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiaf  320 (538)
T KOG0252|consen  281 ----------------------------------------ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAF  320 (538)
T ss_pred             ----------------------------------------ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence                                                    00000 011   12222322   34677788888899999


Q ss_pred             HHHhhchhhHHHHhhCCcccccch--------hhhhhH-HHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHH
Q psy11734        220 YLISTDLPKYMSEVIGLSVAENGV--------LSALPF-LIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPG  290 (817)
Q Consensus       220 ~~~~~~~p~~l~~~~g~s~~~ag~--------~~~~~~-i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~  290 (817)
                      |+...+...++++ .|+.+.+.-.        ...... .+.+.|-.+...++|++||+..          ...+++++.
T Consensus       321 y~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~i----------q~~GF~~~~  389 (538)
T KOG0252|consen  321 YGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYI----------QLMGFFIMT  389 (538)
T ss_pred             hccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHH----------HHhhHHHHH
Confidence            9999989888886 4766554433        122222 2333467788889999999986          888899888


Q ss_pred             HHHHhhhccCCC---hhHHHHHHHHHH-HHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        291 VGALAASYVGCN---TSMVAIFFTIGM-AFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       291 ~~~~~~~~~~~~---~~~~~~~~~l~~-~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      +..+.+....++   .....++..+.. +........+-++..|.+| +.|++..|+.-..+-.|+.++...+..+.++.
T Consensus       390 i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~  469 (538)
T KOG0252|consen  390 IFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN  469 (538)
T ss_pred             HHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc
Confidence            888888766542   222222222222 2332333445777788888 79999999999999999999999988887753


Q ss_pred             cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                                                              .+..-+.+++|++.++++.++.++++++++.+.
T Consensus       470 ----------------------------------------yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~  502 (538)
T KOG0252|consen  470 ----------------------------------------YPPNIGVRNVFIILAGCMLLGILFTLLIPETKG  502 (538)
T ss_pred             ----------------------------------------CCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence                                                    011237899999999999999999999984433

>TIGR00788 fbt folate/biopterin transporter

Probab=99.22  E-value=1.7e-11  Score=138.95  Aligned_cols=275  Identities=11%  Similarity=0.005  Sum_probs=169.7

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchh---HHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFM---TALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAF   78 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~---~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~   78 (817)
                      +++.+++.+...+.+-+++.|..+ |++...   ++.......+|..+|+.++|.+.+ ..+||.+|++.+.+.++. .+
T Consensus       127 ~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~-~~~~~~~f~~~a~l~ll~-~~  203 (468)
T TIGR00788       127 IFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD-KTLTRILFLITAALLLLQ-LF  203 (468)
T ss_pred             HHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH-hcCcchHHHHHHHHHHHH-HH
Confidence            345677777778888899999998 555543   333334455899999999999999 889999999998777776 33


Q ss_pred             hhheeccCCC-CCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHH
Q psy11734         79 WCILCFNDPK-SHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLG  157 (817)
Q Consensus        79 ~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (817)
                      ...++||++. ..+..++++.... ..... ...+                                             
T Consensus       204 ~~~~~~E~~~~~~~~~~~~~~~~~-~~~~~-~~~~---------------------------------------------  236 (468)
T TIGR00788       204 VSNLSKERRAFVRPRIGTYLEMNM-ALLTL-GVLA---------------------------------------------  236 (468)
T ss_pred             HHHhcccccccccccccccchhhh-hhhhh-hHHH---------------------------------------------
Confidence            4455565431 1111101000000 00000 0000                                             


Q ss_pred             HHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCc
Q psy11734        158 FLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLS  237 (817)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s  237 (817)
                                                   . .++......+.+++|.++...+..++.+....+.....-.+.++..|++
T Consensus       237 -----------------------------~-~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s  286 (468)
T TIGR00788       237 -----------------------------N-VKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGG  286 (468)
T ss_pred             -----------------------------H-HHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCC
Confidence                                         0 0000112445678888876555444421111111111111334568999


Q ss_pred             ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc---------CCChhHHHH
Q psy11734        238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV---------GCNTSMVAI  308 (817)
Q Consensus       238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  308 (817)
                      +.+.|....+.+++.+++..+.+++.+|++.|+.          ...+.++..++.+.....         .++......
T Consensus       287 ~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~----------l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~  356 (468)
T TIGR00788       287 PSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL----------FGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLG  356 (468)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH----------HHHHHHHHHHHHhCceeeeeccccccCCCCeeeeee
Confidence            9999999999999999999999999988887775          666666665544332211         012223333


Q ss_pred             HHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        309 FFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       309 ~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      ...+...+.+.........+.+ .+++++|+.+++.+.++++|..+++.++|.+.++.|
T Consensus       357 ~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g  415 (468)
T TIGR00788       357 DSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG  415 (468)
T ss_pred             hhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            3334444555555555555555 445799999999999999999999999999988865

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>KOG2563|consensus

Probab=99.20  E-value=5.8e-11  Score=126.04  Aligned_cols=255  Identities=18%  Similarity=0.153  Sum_probs=178.0

Q ss_pred             ccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccc-----ccCcch--hHHHHhhhHHHHHhhhhheec
Q psy11734         12 TFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSF-----TASWAN--VFYIFGAIAVLWFAFWCILCF   84 (817)
Q Consensus        12 ~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~-----~~gWr~--~f~i~~~~~~i~~~~~~~~~~   84 (817)
                      +.-....+.+.|||++||..|..+-..+..+|.++|.++...+.+.     ...|.-  .|+....+..+.+++..+..+
T Consensus       157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~  236 (480)
T KOG2563|consen  157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFT  236 (480)
T ss_pred             hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3444567889999999999999999999999999999999999871     235666  466666666666666667677


Q ss_pred             cCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHH
Q psy11734         85 NDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALL  164 (817)
Q Consensus        85 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (817)
                      ++|+.++........       +        .                                                
T Consensus       237 ~~P~tPps~s~~~~~-------~--------~------------------------------------------------  253 (480)
T KOG2563|consen  237 KKPPTPPSASQAALQ-------D--------A------------------------------------------------  253 (480)
T ss_pred             CCCCCCCchhHhhhh-------c--------C------------------------------------------------
Confidence            766655432221110       0        0                                                


Q ss_pred             HhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchh
Q psy11734        165 TLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVL  244 (817)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~  244 (817)
                                                .-....++.++|+++....+.+....+.+++..+.+..-+.. .|++...+|+.
T Consensus       254 --------------------------~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~i  306 (480)
T KOG2563|consen  254 --------------------------SFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYI  306 (480)
T ss_pred             --------------------------cHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchh
Confidence                                      013357899999999999999999999999988877766655 58888999999


Q ss_pred             hhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHH-HHhhhccCC--ChhHHHHHHHHHHHHhhhcc
Q psy11734        245 SALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVG-ALAASYVGC--NTSMVAIFFTIGMAFMGFCY  321 (817)
Q Consensus       245 ~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~l~~~~~g~~~  321 (817)
                      .....+++++++.+.|.+.||.++.+.         ..........++ +.+...+..  +.+.......+.+++.....
T Consensus       307 g~l~iv~Gmlga~~~gii~Dktk~fk~---------~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~  377 (480)
T KOG2563|consen  307 GALMIVAGMLGALASGIIADKTKKFKL---------TTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYL  377 (480)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhHHH---------HHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCC
Confidence            999999999999999999999876543         133333333344 222222221  23334444444455554555


Q ss_pred             ccc-cccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        322 ASI-RVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       322 ~~~-~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      |.- -.-.+..+|..-++..|+.|..+|+-+.+-..+.+...+..
T Consensus       378 Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~  422 (480)
T KOG2563|consen  378 PIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDL  422 (480)
T ss_pred             CcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhcc
Confidence            544 33445578988899999999999987777777766665543

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.18  E-value=1.9e-10  Score=122.19  Aligned_cols=297  Identities=16%  Similarity=0.138  Sum_probs=204.0

Q ss_pred             cccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhH-HHH--hhhHHHHHhhhh
Q psy11734          4 MSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVF-YIF--GAIAVLWFAFWC   80 (817)
Q Consensus         4 l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f-~i~--~~~~~i~~~~~~   80 (817)
                      +.|+|.+.....-.++++|..|+|||+++.++.....-+|.+++..+.+.+.+ .++=.-.. .+.  +.+.+++.++..
T Consensus        98 l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~-~~s~~rL~~v~~~~a~i~~~l~~ia~  176 (403)
T PF03209_consen   98 LYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLD-PFSPERLIQVIQGVALIALLLNLIAL  176 (403)
T ss_pred             HHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcc-ccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46788888888899999999999999999999999999999999999998887 44322222 222  222222222222


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      +  +.+|+.++..+.+++             ++                                               
T Consensus       177 w--g~E~r~~~~~~~~~~-------------~~-----------------------------------------------  194 (403)
T PF03209_consen  177 W--GQEPRRSRRAAAAER-------------PR-----------------------------------------------  194 (403)
T ss_pred             H--hcccCCcccccCCCC-------------CC-----------------------------------------------
Confidence            2  222222211100000             00                                               


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                   ....+.++++.++|+....++..++....++.=-..+-+|=-+++|+++.|
T Consensus       195 -----------------------------~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~e  245 (403)
T PF03209_consen  195 -----------------------------PPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGE  245 (403)
T ss_pred             -----------------------------ccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHH
Confidence                                         001234778889999888888888888888877778888889999999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc--CCChhHHHHHHHHHHHHh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADF-FIARDILSRTNVRKVFATLGAVLPGVGALAASYV--GCNTSMVAIFFTIGMAFM  317 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~  317 (817)
                      +..+......+.++|....|++..| .++++.          ...+...+.+++.++...  ..+.+..-....+.+.+.
T Consensus       246 TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~----------a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~  315 (403)
T PF03209_consen  246 TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRT----------AALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN  315 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHH----------HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence            9999999999999999999998874 444443          556666665555554332  224444445555555566


Q ss_pred             hhccccccccccc-cCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734        318 GFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA  396 (817)
Q Consensus       318 g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (817)
                      |.........+.+ ..+++.|..+|.....+.+...++..+.|.+.|-.....                           
T Consensus       316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~---------------------------  368 (403)
T PF03209_consen  316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALF---------------------------  368 (403)
T ss_pred             hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------
Confidence            6555555445555 446899999999999999999999999999998752111                           


Q ss_pred             cccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734        397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE  437 (817)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~  437 (817)
                              .+....+|..+|.+=++..+++..+..-+.+++
T Consensus       369 --------~~~~~~aY~~VF~lEa~ll~~a~~ll~~l~~~~  401 (403)
T PF03209_consen  369 --------GNSPALAYGVVFALEAVLLLAALVLLGRLDRRE  401 (403)
T ss_pred             --------cCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence                    001234799999999999888887765554443

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG0255|consensus

Probab=99.15  E-value=1.6e-10  Score=133.64  Aligned_cols=277  Identities=18%  Similarity=0.185  Sum_probs=174.5

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      +|+++|++.++....+..++.|++++|+|+.+..+ ......++.++++.++++.+   +|||.+++...++++..++ +
T Consensus       177 ~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~  251 (521)
T KOG0255|consen  177 FRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-W  251 (521)
T ss_pred             HHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH-H
Confidence            59999999999999999999999999999999999 88888999999999998876   8999999999888877666 3


Q ss_pred             heeccCCCCCCCCCHHHHh----HhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734         81 ILCFNDPKSHPYISEKERK----YLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL  156 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (817)
                      ++.   ||++|+...+++.    +..++..+....+.+  .++....                                 
T Consensus       252 ~l~---~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~--~~~~~~~---------------------------------  293 (521)
T KOG0255|consen  252 FLP---PESPRWLLSKGRIDEAIKILKKIAKLNGRKLS--VKELLRL---------------------------------  293 (521)
T ss_pred             Hcc---CcChHHHHHcCchHHHHHHHHHHHhhcCCCCC--cHHHHHH---------------------------------
Confidence            333   3455544332221    111111110000000  0000000                                 


Q ss_pred             HHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHH----HHHHHHHHhhchhhHHHH
Q psy11734        157 GFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVG----HDYGLYLISTDLPKYMSE  232 (817)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~----~~~~~~~~~~~~p~~l~~  232 (817)
                                            -...+..+....+++..+.++++.|+.....+...+    ....+|+...     -..
T Consensus       294 ----------------------~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~-----~~~  346 (521)
T KOG0255|consen  294 ----------------------ELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL-----NVS  346 (521)
T ss_pred             ----------------------HHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh-----hhh
Confidence                                  000000000011122346788888754333332222    2223333222     112


Q ss_pred             hhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChh--HHHHHH
Q psy11734        233 VIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTS--MVAIFF  310 (817)
Q Consensus       233 ~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  310 (817)
                      ..|.+..   ......+..........+...|+.|||..          ...+..+..++++...+......  ..+...
T Consensus       347 ~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
T KOG0255|consen  347 GLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPP----------LFLSLFLAGIGLLLFGWLPDDLGGWLHWILP  413 (521)
T ss_pred             hcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHH----------HHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence            1233222   22333333556666677899999988875          77788888888888777764433  455666


Q ss_pred             HHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccce
Q psy11734        311 TIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGF  360 (817)
Q Consensus       311 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~  360 (817)
                      .++.++.+........+..|+.| ..|..+.+..+....+|++++|.+.-.
T Consensus       414 ~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~  464 (521)
T KOG0255|consen  414 LLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLL  464 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66666666666667888889888 589999999999999999999988543

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.14  E-value=2.2e-08  Score=106.68  Aligned_cols=187  Identities=18%  Similarity=0.136  Sum_probs=143.8

Q ss_pred             hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcccccc
Q psy11734        595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADY-LIVRDILS  673 (817)
Q Consensus       595 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~g~~~~~~  673 (817)
                      .++++..+|+........+....+++.--..+-+|-.+++|+++.+...+......+..+|..+.|++..| .++++   
T Consensus       200 a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~---  276 (403)
T PF03209_consen  200 AWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKR---  276 (403)
T ss_pred             HHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH---
Confidence            35677788888888888888888888888889999999999999999999999999999999999998884 33333   


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhc--CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHH
Q psy11734        674 RTNVRKVFATLGAVLPGVGALAASYVG--CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVS  750 (817)
Q Consensus       674 ~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g  750 (817)
                             ...+++..+.+++.++....  .+.+......++.+++.+.......+...+..+ ++.|+.+|.-...+.++
T Consensus       277 -------~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A  349 (403)
T PF03209_consen  277 -------TAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIA  349 (403)
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHH
Confidence                   23466666666666655442  255677777777777777655555566666665 88999999999999999


Q ss_pred             HhHHHHHHHHhhcCC----c---cccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        751 GMVAPLTVGFLTQNK----T---LLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       751 ~~i~p~~~g~~~~~~----g---~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      ..++..++|.+.|..    +   ...|..+|.+=+.+.+++.++....
T Consensus       350 ~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l  397 (403)
T PF03209_consen  350 RGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRL  397 (403)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999988842    1   1347778887777777777666554

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.14  E-value=4.1e-10  Score=123.07  Aligned_cols=252  Identities=14%  Similarity=0.110  Sum_probs=191.3

Q ss_pred             chhhhhhhhccC-CCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------cccCcchhHHHHhhhHHHHHhhhhheeccC
Q psy11734         14 PALCTLLAQWSP-PNERSFMTALVFAGVQLGSVLATFCSGLIMS------FTASWANVFYIFGAIAVLWFAFWCILCFND   86 (817)
Q Consensus        14 ~~~~~~i~~~~p-~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~   86 (817)
                      ..=.++..+..+ ++||.+..+.-.....+|..+...+...+..      ...||+..-++.++++.+..++.++-.+|+
T Consensus       131 iPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER  210 (467)
T COG2211         131 IPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKER  210 (467)
T ss_pred             CchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            333455556655 5899999999999999998777777666654      245899999999999998888888877776


Q ss_pred             CCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHh
Q psy11734         87 PKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTL  166 (817)
Q Consensus        87 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (817)
                      +.+....++..+                                                                    
T Consensus       211 ~~~~~~~~~~~~--------------------------------------------------------------------  222 (467)
T COG2211         211 VVETQPTKTGVK--------------------------------------------------------------------  222 (467)
T ss_pred             cCccccCccccc--------------------------------------------------------------------
Confidence            542211000000                                                                    


Q ss_pred             hhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhh
Q psy11734        167 LTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSA  246 (817)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~  246 (817)
                                             ++.+..+..++|||++....+...+......-.....+.|.+...|.+...+.....
T Consensus       223 -----------------------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~  279 (467)
T COG2211         223 -----------------------LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLL  279 (467)
T ss_pred             -----------------------ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHH
Confidence                                   001223457889999998888888887777777788888888888888888888888


Q ss_pred             hhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCC-hhHHHHHHHHHHHHhhhcccccc
Q psy11734        247 LPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAIFFTIGMAFMGFCYASIR  325 (817)
Q Consensus       247 ~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~g~~~~~~~  325 (817)
                      ....+.+++.++..++++|+|+|+.          ..++.++..++.+.+.+.+.+ ....++..++...+.+...+..+
T Consensus       280 ~~~~~~l~~~~~~p~L~~~~gkk~~----------~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~w  349 (467)
T COG2211         280 ASGAGLLIGLILWPRLVKKFGKKKL----------FLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPW  349 (467)
T ss_pred             HHHHHHHHHHHhHHHHHHHhchHHH----------HHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccH
Confidence            8888888999999999999999996          777777777777777777644 44455555666777777777778


Q ss_pred             ccccccCC--------CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        326 VNPIDLSP--------NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       326 ~~~~~~~p--------~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      +.+.|...        +..|..+|.+++++=+|.+++..+.|.+++..|
T Consensus       350 am~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G  398 (467)
T COG2211         350 AMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG  398 (467)
T ss_pred             HHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            88777553        346889999999999999999999999998876

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.11  E-value=1.5e-10  Score=132.06  Aligned_cols=254  Identities=9%  Similarity=-0.058  Sum_probs=160.1

Q ss_pred             ccchhhhhhhhcc-CCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------cccCcchhHHHHhhhHHHHHhhhhheec
Q psy11734         12 TFPALCTLLAQWS-PPNERSFMTALVFAGVQLGSVLATFCSGLIMS------FTASWANVFYIFGAIAVLWFAFWCILCF   84 (817)
Q Consensus        12 ~~~~~~~~i~~~~-p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------~~~gWr~~f~i~~~~~~i~~~~~~~~~~   84 (817)
                      ..+.-.++..|.. +++||.+..+.-.....+|..+.+.+...+.+      ...+|+...++.+++.++.....++..|
T Consensus       123 ~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~  202 (473)
T PRK10429        123 MDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVH  202 (473)
T ss_pred             HcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCce
Confidence            3444557778888 58999999988666666665555554443322      0236888888887777776666666566


Q ss_pred             cCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHH
Q psy11734         85 NDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALL  164 (817)
Q Consensus        85 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (817)
                      |+++.+.. +.++               +++.+                                               
T Consensus       203 e~~~~~~~-~~~~---------------~~~~~-----------------------------------------------  219 (473)
T PRK10429        203 EVYSSDNQ-VSAE---------------GSHLT-----------------------------------------------  219 (473)
T ss_pred             ecCCcccc-cccc---------------ccCCC-----------------------------------------------
Confidence            65321100 0000               00000                                               


Q ss_pred             HhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchh
Q psy11734        165 TLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVL  244 (817)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~  244 (817)
                                                 .++.++.+++||.++...+..++.....+....+.+.|++.. ..+....+.+
T Consensus       220 ---------------------------~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~-~~~~~~~~~~  271 (473)
T PRK10429        220 ---------------------------LKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV-IGDADLFPYY  271 (473)
T ss_pred             ---------------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEE-CCCHHHHHHH
Confidence                                       122355678999998888888888877777777777666554 3345555666


Q ss_pred             hhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc---c-CCChhHHHHHHHHHHHHhhhc
Q psy11734        245 SALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY---V-GCNTSMVAIFFTIGMAFMGFC  320 (817)
Q Consensus       245 ~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~l~~~~~g~~  320 (817)
                      .....++.+++.++.++++||+|+|+.          ...+..+..++.+.+..   . +.+.+...+...+.+.+.+..
T Consensus       272 ~~~~~i~~ii~~~~~~~l~~r~gkk~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~  341 (473)
T PRK10429        272 LSYAGAANLVTLILFPRLVKSLSRRIL----------WAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALF  341 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCcHHH----------HHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHH
Confidence            666678899999999999999999985          44444443333332221   2 223333333334444444444


Q ss_pred             cccccccccccCC--------CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        321 YASIRVNPIDLSP--------NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       321 ~~~~~~~~~~~~p--------~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      .....+...|..+        +..|..+|..++...++.++++.+.|.+.+..|
T Consensus       342 ~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G  395 (473)
T PRK10429        342 WVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG  395 (473)
T ss_pred             HHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            4544555555432        346779999999999999999999999998775

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.08  E-value=1.1e-09  Score=116.11  Aligned_cols=189  Identities=15%  Similarity=0.114  Sum_probs=147.8

Q ss_pred             CchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcc
Q psy11734        193 KTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDIL  272 (817)
Q Consensus       193 ~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~  272 (817)
                      +...+++.+++++....++.++..-+..+.......|-.+.+|.+..+..+......+..++|+++.|++.||++.|++ 
T Consensus       242 ~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~v-  320 (438)
T COG2270         242 KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPV-  320 (438)
T ss_pred             HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcee-
Confidence            4457888899999999999999999999999999999998899999999999999999999999999999999999986 


Q ss_pred             cchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccc-cccccccCCCchhHHHHHHHhhhhhcc
Q psy11734        273 SRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASI-RVNPIDLSPNFSGTIMALSNGLGCVSG  351 (817)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~g~a~g~~~~~~~lg~  351 (817)
                               +..+.++..+..+...+...+.......+.++.+.. ...+.. ......++|++.+..+|+.+..++..+
T Consensus       321 ---------l~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G-~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S  390 (438)
T COG2270         321 ---------LMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLG-GAQASSRSYLARLVPKGKEGRFFGLYALTGRAAS  390 (438)
T ss_pred             ---------ehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcc-hHHHHHHHHHHHhCCCccccceeehhhhhhhHHH
Confidence                     666666666555555555434333333344344333 333434 444455666899999999999999999


Q ss_pred             cccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhe
Q psy11734        352 MVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFV  431 (817)
Q Consensus       352 ~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~  431 (817)
                      .+||...+.+.+.+|                                            +-|..+....++..++.++..
T Consensus       391 ~~gp~lv~v~t~iTg--------------------------------------------~~r~g~~~i~vll~iGl~~L~  426 (438)
T COG2270         391 FLGPFLVAVITQITG--------------------------------------------SSRAGVLSIIVLLLIGLLLLL  426 (438)
T ss_pred             HHHHHHHHHHHHHhc--------------------------------------------chhhHHHHHHHHHHhhHhhEE
Confidence            999999999988875                                            356677777778888888777


Q ss_pred             eeccc
Q psy11734        432 LFGSG  436 (817)
Q Consensus       432 ~~~~~  436 (817)
                      ..+.+
T Consensus       427 ~v~~~  431 (438)
T COG2270         427 RVKVP  431 (438)
T ss_pred             eecCC
Confidence            76644

>KOG2615|consensus

Probab=99.08  E-value=2.5e-10  Score=118.29  Aligned_cols=275  Identities=15%  Similarity=0.127  Sum_probs=157.0

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHH----
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWF----   76 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~----   76 (817)
                      |++.|+.-| ...+..++++|.+++|+|+++++..+..+++|-++||.+||++.++. ..=+..|.....+..+..    
T Consensus       128 R~l~Gi~kg-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v  206 (451)
T KOG2615|consen  128 RFLGGIFKG-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDV  206 (451)
T ss_pred             HHhhhhccC-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHH
Confidence            888999888 67788999999999999999999999999999999999999998711 112222333221111111    


Q ss_pred             hhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734         77 AFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL  156 (817)
Q Consensus        77 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (817)
                      .+..+++||+=+.+++.  +++.+..+....  +.+..+++|.+                                    
T Consensus       207 ~~~~~~lpETL~~rk~~--~~~~~~~~~~~~--~~~~~~~~~~~------------------------------------  246 (451)
T KOG2615|consen  207 TFFPWFLPETLPLRKRN--DEHSTLQEAADD--RLALLKFARIF------------------------------------  246 (451)
T ss_pred             HHHHHhCCccccchhhc--ccccchhhhhhh--hhhhcchhhhh------------------------------------
Confidence            12233344431111111  111101110000  00101111100                                    


Q ss_pred             HHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchh------HHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734        157 GFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLP------VWSLIISEVGHDYGLYLISTDLPKYM  230 (817)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~i~~~~~~~~~~~~~~~~p~~l  230 (817)
                                                             -....||++      .+..+...-+.+.-.|......+..+
T Consensus       247 ---------------------------------------~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l  287 (451)
T KOG2615|consen  247 ---------------------------------------KVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFL  287 (451)
T ss_pred             ---------------------------------------hhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHh
Confidence                                                   012223332      12222222222222333333333333


Q ss_pred             -HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHH
Q psy11734        231 -SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIF  309 (817)
Q Consensus       231 -~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (817)
                       .+.+|+++.+.|.+....++.+.+.+..-.+..||.....        +..+..++.++...++++.... ........
T Consensus       288 ~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~--------~a~l~~~l~~~vP~~llls~~~-~~~~l~~~  358 (451)
T KOG2615|consen  288 THGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNI--------KAVLLFSLLLIVPAFLLLSLAR-TPVVLYLG  358 (451)
T ss_pred             hcCccCCChhhheeeeehhhHHHHHHHHhccccccccccch--------hhHHHHHHHHHHHHHHHHhccc-cchhhhHH
Confidence             4568999999999999999988888877777777755211        1124444444444444444433 33344444


Q ss_pred             HHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        310 FTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       310 ~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      ..+-.+......+..........| .+||+++|+..+.+.++-++||.+.|.+....
T Consensus       359 s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws  415 (451)
T KOG2615|consen  359 STLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS  415 (451)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence            444444444455555555555555 79999999999999999999999999887653

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.07  E-value=5.4e-10  Score=121.04  Aligned_cols=187  Identities=12%  Similarity=0.146  Sum_probs=137.0

Q ss_pred             HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHh---hCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcc
Q psy11734        196 WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEV---IGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDIL  272 (817)
Q Consensus       196 ~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~---~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~  272 (817)
                      ..+++|+|++|...+........++.+-...|.|++..   .+.+....|++.+...+..++...+.+++.+|+|.|+. 
T Consensus       213 ~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~-  291 (412)
T PF01306_consen  213 VLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNL-  291 (412)
T ss_dssp             HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-
T ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhH-
Confidence            56899999999988887777777777655677777652   24455668888888899999999999999999999986 


Q ss_pred             cchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHH-Hhhhhhc
Q psy11734        273 SRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALS-NGLGCVS  350 (817)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~-~~~~~lg  350 (817)
                               +.++..++.+=.....+.+ +++.....-.+-+.-........--+.++..| |..++...+. +...++|
T Consensus       292 ---------Lllag~i~~iRi~~~~~~~-~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~  361 (412)
T PF01306_consen  292 ---------LLLAGVIMAIRIIGSGFAT-NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIG  361 (412)
T ss_dssp             ---------HHHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHH
T ss_pred             ---------HHHHHHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHH
Confidence                     6666666666666666655 55566665555555555555555556666555 7788999985 6888899


Q ss_pred             ccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhh
Q psy11734        351 GMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFF  430 (817)
Q Consensus       351 ~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~  430 (817)
                      ..+.+.++|.+.|+.                                             |++.+|++++++.++..++.
T Consensus       362 ~~i~s~~~G~lyd~~---------------------------------------------G~~~tylimg~iv~~~~li~  396 (412)
T PF01306_consen  362 IIILSPLAGYLYDRI---------------------------------------------GFQHTYLIMGLIVLPFTLIS  396 (412)
T ss_dssp             HHHHHHHHHHHHHHH---------------------------------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHhhHhhc---------------------------------------------CcHHHHHHHHHHHHHHHHHh
Confidence            999999999999997                                             68999999998888777665


Q ss_pred             eeeccccc
Q psy11734        431 VLFGSGEV  438 (817)
Q Consensus       431 ~~~~~~~~  438 (817)
                      .+.-++++
T Consensus       397 ~f~l~~~~  404 (412)
T PF01306_consen  397 AFTLKKDK  404 (412)
T ss_dssp             HHHS--SS
T ss_pred             eeeecCCC
Confidence            55544443

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>KOG3626|consensus

Probab=99.06  E-value=1.7e-09  Score=123.28  Aligned_cols=197  Identities=14%  Similarity=0.152  Sum_probs=142.3

Q ss_pred             ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccC------------------cchh
Q psy11734          3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTAS------------------WANV   64 (817)
Q Consensus         3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~g------------------Wr~~   64 (817)
                      ++.|+|+..++|...+++-|...+++-+..+|+..+...+|+++|..+|++....+.+                  |.--
T Consensus       245 ~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlG  324 (735)
T KOG3626|consen  245 LLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLG  324 (735)
T ss_pred             HHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHH
Confidence            5789999999999999999999999999999999999999999999999998862211                  4555


Q ss_pred             HHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhcccccccc
Q psy11734         65 FYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGIL  144 (817)
Q Consensus        65 f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (817)
                      |++.+.+.++..+..+++=++.|++.++.+.++.+....+..  ...++..+..                          
T Consensus       325 FLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~--------------------------  376 (735)
T KOG3626|consen  325 FLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESG--GAKSDKTFGK--------------------------  376 (735)
T ss_pred             HHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccc--cccCCcchhh--------------------------
Confidence            666777777776666666444454433211111111100000  0000000000                          


Q ss_pred             ccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhh
Q psy11734        145 SQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLIST  224 (817)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~  224 (817)
                                                                 .-++-+...+++++||.+....+...+....+.++.+
T Consensus       377 -------------------------------------------~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~t  413 (735)
T KOG3626|consen  377 -------------------------------------------KIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYIT  413 (735)
T ss_pred             -------------------------------------------hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHH
Confidence                                                       0011234567999999999999999999999999999


Q ss_pred             chhhHHHHhhCCcccccchhhhhhHH-HHHHHHhhhHHHHHHHhhcC
Q psy11734        225 DLPKYMSEVIGLSVAENGVLSALPFL-IMWLVSMSSSALADFFIARD  270 (817)
Q Consensus       225 ~~p~~l~~~~g~s~~~ag~~~~~~~i-~~~ig~~~~G~l~dk~g~r~  270 (817)
                      ++|.|+++.+|.++..+..++....+ +..+|.+++|++..|+..+.
T Consensus       414 FlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~  460 (735)
T KOG3626|consen  414 FLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSA  460 (735)
T ss_pred             hhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccH
Confidence            99999999999999999988866554 56688899999999976543

>PRK11462 putative transporter; Provisional

Probab=99.01  E-value=3.2e-09  Score=120.40  Aligned_cols=242  Identities=12%  Similarity=0.067  Sum_probs=145.8

Q ss_pred             hhhhhhccC-CCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-------cCcchhHHHHhhhHHHHHhhhhheeccCCC
Q psy11734         17 CTLLAQWSP-PNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-------ASWANVFYIFGAIAVLWFAFWCILCFNDPK   88 (817)
Q Consensus        17 ~~~i~~~~p-~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-------~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~   88 (817)
                      .++..|..+ +|||.+..++-..+..+|..+++.+...+.+ .       .||+....+.+++.+++..+.+...||+++
T Consensus       131 ~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~-~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~  209 (460)
T PRK11462        131 CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVN-LIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVE  209 (460)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccC
Confidence            455666666 6899999999999999988888777655544 2       368888888887777776666655554422


Q ss_pred             CCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhh
Q psy11734         89 SHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLT  168 (817)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (817)
                      +++     ++.                                                                     
T Consensus       210 ~~~-----~~~---------------------------------------------------------------------  215 (460)
T PRK11462        210 APP-----TTT---------------------------------------------------------------------  215 (460)
T ss_pred             CCc-----cCC---------------------------------------------------------------------
Confidence            110     000                                                                     


Q ss_pred             hcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhh
Q psy11734        169 PLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALP  248 (817)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~  248 (817)
                                            +.++..+.+++||.++......++..............|.+...|. +...+.+....
T Consensus       216 ----------------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~  272 (460)
T PRK11462        216 ----------------------SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTY  272 (460)
T ss_pred             ----------------------CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHH
Confidence                                  0012356778898887776665555554444444444444443343 23344556677


Q ss_pred             HHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCC-hhHHHHHHHHHHHHhhhcccccccc
Q psy11734        249 FLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAIFFTIGMAFMGFCYASIRVN  327 (817)
Q Consensus       249 ~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~g~~~~~~~~~  327 (817)
                      .++++++.+++++++||+++|+.          ...+..+..+....+.+.+.+ .....+...+.+.+.+...+.....
T Consensus       273 ~i~~iig~~l~~~l~~r~gkk~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m  342 (460)
T PRK11462        273 CVGNLIGSALAKPLTDWKCKVTI----------FWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM  342 (460)
T ss_pred             HHHHHHHHHHHHHHHHHhChHHH----------HHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88899999999999999998864          332222222222222222222 2222233333333333333333444


Q ss_pred             ccccCC--------CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        328 PIDLSP--------NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       328 ~~~~~p--------~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      ..|..+        +..|..++..++...+|.++++.+.|.+.+..|
T Consensus       343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G  389 (460)
T PRK11462        343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG  389 (460)
T ss_pred             HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            444332        234666788889999999999999999988754

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.01  E-value=5.6e-11  Score=135.46  Aligned_cols=294  Identities=14%  Similarity=0.089  Sum_probs=3.0

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-----------------cC----
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-----------------AS----   60 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-----------------~g----   60 (817)
                      .++.|+|+...+++..+++-|..++++-+..+|++.+...+|+++|..+++.....+                 ..    
T Consensus       148 q~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGA  227 (539)
T PF03137_consen  148 QLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGA  227 (539)
T ss_dssp             ----SSS-------------------------------------------------------------------------
T ss_pred             HHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHH
Confidence            478999999999999999999999999999999999999999999999999887511                 12    


Q ss_pred             cchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhh-ccccccccccccccCccccchhhhhhhhchhhccc
Q psy11734         61 WANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDS-IGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHI  139 (817)
Q Consensus        61 Wr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (817)
                      |=--|++.+.+.++..+..+.+-|+.|+.++..++++.+....+ ....+..++++..  +                   
T Consensus       228 WWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------------------  286 (539)
T PF03137_consen  228 WWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKK--S-------------------  286 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhccccccccc--c-------------------
Confidence            44445555555555555555543333433111111111000000 0000000000000  0                   


Q ss_pred             cccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHH
Q psy11734        140 PGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGL  219 (817)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~  219 (817)
                                                                   ....-++.+...+++++||.+....+...+.....
T Consensus       287 ---------------------------------------------~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~  321 (539)
T PF03137_consen  287 ---------------------------------------------FGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIV  321 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ---------------------------------------------hhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence                                                         00001122445679999999999999999999999


Q ss_pred             HHHhhchhhHHHHhhCCcccccchhhhhhHH-HHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH-HHHhhh
Q psy11734        220 YLISTDLPKYMSEVIGLSVAENGVLSALPFL-IMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV-GALAAS  297 (817)
Q Consensus       220 ~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i-~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  297 (817)
                      .++.++.|.|+|..++.++.++.++.....+ +..+|.+++|++.+|+..+..    +.-+.......+.... ...++.
T Consensus       322 ~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~----~~~~~~~v~~~v~~~~~~~~~~~  397 (539)
T PF03137_consen  322 SGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSAR----GAAKFCIVVSIVSVILYSPLFFL  397 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHH----HHHHHHHHHHHHHHHHHHHHHee
Confidence            9999999999999999999999988766554 777899999999999865421    1111111111111111 111111


Q ss_pred             ccCC--------------------------------------------C----hhHHHHHHHHHHHH-hhhccccccccc
Q psy11734        298 YVGC--------------------------------------------N----TSMVAIFFTIGMAF-MGFCYASIRVNP  328 (817)
Q Consensus       298 ~~~~--------------------------------------------~----~~~~~~~~~l~~~~-~g~~~~~~~~~~  328 (817)
                      ..++                                            +    .....+.+++..+. .....+...+..
T Consensus       398 ~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~L  477 (539)
T PF03137_consen  398 GCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITL  477 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeee
Confidence            1100                                            0    00111111111222 222344446666


Q ss_pred             cccCCCchhHHHHHHHhhhh-hcccccccccceecccc
Q psy11734        329 IDLSPNFSGTIMALSNGLGC-VSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       329 ~~~~p~~~g~a~g~~~~~~~-lg~~~~~~i~g~l~~~~  365 (817)
                      ..+++++|+.|.|+...+.+ +|..-||.++|.+.|..
T Consensus       478 R~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t  515 (539)
T PF03137_consen  478 RCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST  515 (539)
T ss_dssp             --------------------------------------
T ss_pred             ccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence            77888999999999998755 68899999999999985

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.01  E-value=3.3e-09  Score=117.09  Aligned_cols=192  Identities=17%  Similarity=0.160  Sum_probs=143.6

Q ss_pred             HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccch
Q psy11734        196 WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRT  275 (817)
Q Consensus       196 ~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~  275 (817)
                      ..+++|||++....+..++..........+.+.|+++.-|++....+.......++-++.....+++..|+|.++.    
T Consensus       200 ~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l----  275 (400)
T PF03825_consen  200 ALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWL----  275 (400)
T ss_pred             HHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH----
Confidence            4579999999998888888888888889999999998533788888888888888899999999999999999885    


Q ss_pred             hhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHH----HHHHhhhccccccccccccCC-CchhHHHHHHHhhh-hh
Q psy11734        276 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTI----GMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLG-CV  349 (817)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~-~l  349 (817)
                            +.++.+..++=..+.....++.+.......+    -+...+........++.+..| +.|+++.++.+.+. .+
T Consensus       276 ------l~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Gl  349 (400)
T PF03825_consen  276 ------LLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGL  349 (400)
T ss_pred             ------HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhH
Confidence                  7777777776665665553344443333333    344444555556677777555 78999999999875 59


Q ss_pred             cccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhh
Q psy11734        350 SGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVF  429 (817)
Q Consensus       350 g~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~  429 (817)
                      |+++|..++|.+.|+.|..                                       ..-.|...+.+.+++.++..++
T Consensus       350 g~~iG~~igG~l~~~~g~~---------------------------------------~~~~~~~~~~v~a~~~~~~~~~  390 (400)
T PF03825_consen  350 GGAIGSLIGGWLYDAFGAR---------------------------------------GMFDWSAVFLVFAVMALVILVL  390 (400)
T ss_pred             HHHHHHHHHHHHHHHhcch---------------------------------------hhhhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987510                                       0124777888888877777766


Q ss_pred             heeeccc
Q psy11734        430 FVLFGSG  436 (817)
Q Consensus       430 ~~~~~~~  436 (817)
                      +.++-|+
T Consensus       391 f~~~fk~  397 (400)
T PF03825_consen  391 FVILFKP  397 (400)
T ss_pred             HHhhccC
Confidence            6555444

>KOG3626|consensus

Probab=98.98  E-value=1.7e-07  Score=107.11  Aligned_cols=283  Identities=15%  Similarity=0.127  Sum_probs=192.9

Q ss_pred             HHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc---------
Q psy11734        229 YMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV---------  299 (817)
Q Consensus       229 ~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  299 (817)
                      -.++.++++..+.|++..-.-+++.+......+..-|..|.++          +..|.++++++.++....         
T Consensus       122 tiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~----------Ig~G~~~m~lgsll~alPHf~~~~y~~  191 (735)
T KOG3626|consen  122 TIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRW----------IGIGLVLMGLGSLLFALPHFFSGPYEY  191 (735)
T ss_pred             hhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccce----------eeechhHHHHHHHHHhChHHhcCcchh
Confidence            3456688999999999999999999999999999999888886          778888888777776552         


Q ss_pred             -----------C---------------------------CChhHHHHHHHHHHHHhhhc----cccccccccccCC-Cch
Q psy11734        300 -----------G---------------------------CNTSMVAIFFTIGMAFMGFC----YASIRVNPIDLSP-NFS  336 (817)
Q Consensus       300 -----------~---------------------------~~~~~~~~~~~l~~~~~g~~----~~~~~~~~~~~~p-~~~  336 (817)
                                 +                           .+....+++++++-...|.+    ++.-..++.|... ++.
T Consensus       192 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~S  271 (735)
T KOG3626|consen  192 ELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNS  271 (735)
T ss_pred             hhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCC
Confidence                       0                           00111333333333333333    3333667777665 678


Q ss_pred             hHHHHHHHhhhhhcccccccccceecccccccC--CCCCCCCCccchhhcccCccccccccccccccccccCCccchhHH
Q psy11734        337 GTIMALSNGLGCVSGMVAPLTVGFLTQNIISIN--PIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRV  414 (817)
Q Consensus       337 g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (817)
                      +.-.|+.++++-+|-++|=.+++.......++.  +..+.+..                            ......|-.
T Consensus       272 plYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~D----------------------------PrWIGAWWl  323 (735)
T KOG3626|consen  272 PLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTD----------------------------PRWIGAWWL  323 (735)
T ss_pred             cHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCC----------------------------cchhhHHHH
Confidence            899999999999999999888888877654331  11111111                            112346888


Q ss_pred             HHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCC
Q psy11734        415 VFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESC  494 (817)
Q Consensus       415 ~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (817)
                      -|++.+.+.++..+..++++|+.++..+++..+                               +  .+         .+
T Consensus       324 GFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~-------------------------------~--~~---------~~  361 (735)
T KOG3626|consen  324 GFLICGALLLFSAVPLFFFPKELPKSQKRKRAR-------------------------------D--LH---------VL  361 (735)
T ss_pred             HHHHHHHHHHHHHHHHHhCcccCccccccchhh-------------------------------h--hc---------cc
Confidence            888999999999999999988876543321000                               0  00         00


Q ss_pred             CCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhc
Q psy11734        495 FPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHS  574 (817)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~  574 (817)
                        .   ++...++..+++.++.                                                       .  
T Consensus       362 --k---~~~~~~~~~~~~~~~i-------------------------------------------------------k--  379 (735)
T KOG3626|consen  362 --K---TESGGAKSDKTFGKKI-------------------------------------------------------K--  379 (735)
T ss_pred             --c---cccccccCCcchhhhH-------------------------------------------------------H--
Confidence              0   0000001011110000                                                       0  


Q ss_pred             chHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH-HHHH
Q psy11734        575 GPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF-LIMW  653 (817)
Q Consensus       575 s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~-~~~~  653 (817)
                      .+                ....+++++||.+....++..+....+.++.+|+|.|+++.+|.++..+..+..... .+..
T Consensus       380 df----------------p~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~  443 (735)
T KOG3626|consen  380 DF----------------PKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAA  443 (735)
T ss_pred             HH----------------HHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhh
Confidence            11                134688999999999999999999999999999999999999999999998886655 4777


Q ss_pred             HHHHHHHHHHhhhhcc
Q psy11734        654 LVSMSSSALADYLIVR  669 (817)
Q Consensus       654 ig~~~~g~l~dr~g~~  669 (817)
                      +|.+++|++..|+.-+
T Consensus       444 ~Gi~lGG~iikkfkl~  459 (735)
T KOG3626|consen  444 VGIFLGGLIIKKFKLS  459 (735)
T ss_pred             hhhhccceeeeeeccc
Confidence            8999999999998744

>TIGR00806 rfc RFC reduced folate carrier

Probab=98.95  E-value=4.7e-08  Score=106.70  Aligned_cols=161  Identities=12%  Similarity=0.033  Sum_probs=122.7

Q ss_pred             HhhHHHHHHHHhCCChhH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q psy11734        623 SSDLPKYMSQVIGLSVAE-NGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGC  701 (817)
Q Consensus       623 ~~~~p~~l~~~~g~s~~~-~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~  701 (817)
                      ..+...++.+.+|+|.++ .+.+.+.+..+-.+..+.+|+++||+|.|+++          ..+.+...+..++..+.. 
T Consensus        45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL----------~l~~l~Wsl~t~L~~fa~-  113 (511)
T TIGR00806        45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL----------VLQALSFVCVWLLLLLGT-  113 (511)
T ss_pred             HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHH-
Confidence            445666788789999999 99999999999999999999999999988764          466666666666666653 


Q ss_pred             chHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHH
Q psy11734        702 NTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLT  780 (817)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~  780 (817)
                      +.....+.-++.+.+.+... ....++...+| ++|++++|+.+....+|.++++.+.++ ....+-..|....++..+.
T Consensus       114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s  191 (511)
T TIGR00806       114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVF  191 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHH
Confidence            45556666666666666666 66677777777 889999999999999999999999999 4455433455556566666


Q ss_pred             HHHHHHHHHHhccCcc
Q psy11734        781 LFISNVFFVLFGSGEV  796 (817)
Q Consensus       781 ~~i~~~~~~~~~~~~~  796 (817)
                      ..++.+..++++++++
T Consensus       192 ~~~a~~~a~~LP~~~~  207 (511)
T TIGR00806       192 MTFSVFLALFLKRPKR  207 (511)
T ss_pred             HHHHHHHHHhCCCCch
Confidence            6667777777765444

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>KOG3762|consensus

Probab=98.93  E-value=1.2e-08  Score=110.60  Aligned_cols=178  Identities=20%  Similarity=0.149  Sum_probs=129.8

Q ss_pred             hhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734        599 ILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR  678 (817)
Q Consensus       599 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r  678 (817)
                      ++.+++..+..+...+...+.-.+.+++=-++++ .+-.+..-|.....-..+-++.-++.+++.+|+|+-+++.     
T Consensus       367 ~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~-----  440 (618)
T KOG3762|consen  367 VFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY-----  440 (618)
T ss_pred             HhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceee-----
Confidence            4445554444444444444444445555445555 5655666676666777788888899999999999998864     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHH-HHHhHHHH
Q psy11734        679 KVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC-VSGMVAPL  756 (817)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~-~g~~i~p~  756 (817)
                           .+..+.++=++.+.+. .++|..+.+-++.+...+..+..+.++++...| +.++++.|+...... +|-.+|++
T Consensus       441 -----lgLa~~~~Rf~~~S~L-~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl  514 (618)
T KOG3762|consen  441 -----LGLACNVGRFLYYSYL-QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL  514 (618)
T ss_pred             -----ehhhHHHHHHHHHHHh-cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence                 6666666655555555 489999999999999999888888888988887 789999999876655 68999999


Q ss_pred             HHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        757 TVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       757 ~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      ++|.+.+..+   -+..|...++.+++.++.+...
T Consensus       515 IGG~~v~~fg---~~ttf~~~giAcl~~l~~~~~i  546 (618)
T KOG3762|consen  515 IGGFVVERFG---ARTTFRIFGIACLVTLALFISI  546 (618)
T ss_pred             hhhhhheeeh---hHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999976   4566776666666666555544

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=98.92  E-value=8.9e-09  Score=111.66  Aligned_cols=188  Identities=19%  Similarity=0.233  Sum_probs=154.8

Q ss_pred             HHhhcCH-hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhC----CChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhccc
Q psy11734        597 AAILSSL-PVWSLIISEVGHDYGFYLISSDLPKYMSQVIG----LSVAENGVLSALPFLIMWLVSMSSSALADY-LIVRD  670 (817)
Q Consensus       597 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g----~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~g~~~  670 (817)
                      +..+++| .++.+...-+.--+++|++-..+-.|+....+    +|.+++.-+++.+....-...+++||++|| +|+|+
T Consensus        14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~   93 (498)
T COG3104          14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR   93 (498)
T ss_pred             cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Confidence            4456665 47778888899999999999999999998888    999999999999999999999999999999 57776


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCCC---chHHHHHHHHHH
Q psy11734        671 ILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPN---FSGTIMALSNGL  746 (817)
Q Consensus       671 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~  746 (817)
                      ++          +.+.++..++.+++.... .++....+.+.+...+.+..-+...+...|.+|+   +|-.+.++....
T Consensus        94 tI----------~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~  163 (498)
T COG3104          94 TI----------VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMG  163 (498)
T ss_pred             HH----------HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEE
Confidence            64          588888888988888763 3455555555555566677777777778887762   378888888999


Q ss_pred             HHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCccc
Q psy11734        747 GCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQ  797 (817)
Q Consensus       747 ~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  797 (817)
                      .++|+.++|.+.+++.++.|   |+..|...++...++.+.++..+++.+.
T Consensus       164 iNiGsl~~p~i~~~~~~~~g---~~~gF~~aavGm~~gl~~f~~~~r~~~~  211 (498)
T COG3104         164 INIGSLIAPIITGLLAINYG---WHVGFGLAAVGMIIGLVIFLLGRRHVKG  211 (498)
T ss_pred             eehHHHHHHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence            99999999999999999987   9999999999999999998888665543

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=98.85  E-value=2e-07  Score=104.46  Aligned_cols=183  Identities=15%  Similarity=0.097  Sum_probs=130.9

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----hhcccccccchhh
Q psy11734        603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADY----LIVRDILSRTNVR  678 (817)
Q Consensus       603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~g~~~~~~~~~~r  678 (817)
                      ++...+....+..++++.....+++.|+++ +|.+....+.......+.+++..++.|+++||    +|||+.       
T Consensus         4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp-------   75 (477)
T TIGR01301         4 RKLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP-------   75 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH-------
Confidence            345556666677777888888889998866 89999999999999999999999999999995    888653       


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcC------------ch----HHHHHHHHHHHHHHhhhhhhhhhhccccCC-Cch--HHH
Q psy11734        679 KVFATLGAVLPGVGALAASYVGC------------NT----SMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFS--GTI  739 (817)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~~~~~~------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--g~~  739 (817)
                        ++..+.....++++++.+...            +.    +..+..+.+.-+..+...++..+...|..| ++|  +.+
T Consensus        76 --~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a  153 (477)
T TIGR01301        76 --FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIA  153 (477)
T ss_pred             --HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHH
Confidence              345556666666666655321            00    112222333344555566677788999888 433  689


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHh--hcCCc----------cccHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734        740 MALSNGLGCVSGMVAPLTVGFL--TQNKT----------LLEWRVVFWIMFLTLFISNVFFVLFGSGE  795 (817)
Q Consensus       740 ~g~~~~~~~~g~~i~p~~~g~~--~~~~g----------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  795 (817)
                      .+..+...++|+.+++.+.+..  .+..+          ..+++..|++.+++.+++.+...+..+++
T Consensus       154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~  221 (477)
T TIGR01301       154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN  221 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence            9999999999999999998864  22110          02578899998888888887777765443

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=98.83  E-value=4.2e-10  Score=128.36  Aligned_cols=381  Identities=13%  Similarity=0.095  Sum_probs=1.3

Q ss_pred             HHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC---C----
Q psy11734        229 YMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG---C----  301 (817)
Q Consensus       229 ~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----  301 (817)
                      -+++.++++..++|++.+...++.++..++..+..+|..|.|+          +..|.++++++.+++....   .    
T Consensus        28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprw----------ig~g~~~~~~g~~l~~lPhf~~~~y~~   97 (539)
T PF03137_consen   28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRW----------IGIGALLMGLGSLLFALPHFLSGPYSY   97 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcce----------eeecHHHHHHHHHHHhccHhhcCCCcc
Confidence            4556689999999999999999999999999999998766665          7788888887777665420   0    


Q ss_pred             --------------------------------------ChhHHHHHHHHHHHHhhhccc----cccccccccC-CCchhH
Q psy11734        302 --------------------------------------NTSMVAIFFTIGMAFMGFCYA----SIRVNPIDLS-PNFSGT  338 (817)
Q Consensus       302 --------------------------------------~~~~~~~~~~l~~~~~g~~~~----~~~~~~~~~~-p~~~g~  338 (817)
                                                            .......++.++-...|.+.+    .-.+++.|.. +++.+.
T Consensus        98 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~spl  177 (539)
T PF03137_consen   98 EEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPL  177 (539)
T ss_dssp             ------------------------------------------------------SSS-----------------------
T ss_pred             ccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCcc
Confidence                                                  001122333334344444333    3366777744 478888


Q ss_pred             HHHHHHhhhhhcccccccccceecccccccCCC-----CCCCCCccchhhcccCccccccccccccccccccCCccchhH
Q psy11734        339 IMALSNGLGCVSGMVAPLTVGFLTQNIISINPI-----DLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWR  413 (817)
Q Consensus       339 a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (817)
                      -.|+.+.+..+|.++|=.+++...+...++...     .+.|+..-                            ...+|=
T Consensus       178 YiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~----------------------------WvGAWW  229 (539)
T PF03137_consen  178 YIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPR----------------------------WVGAWW  229 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             chhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCcc----------------------------HHHHHH
Confidence            889999999999988888888877654332211     11111110                            122455


Q ss_pred             HHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCC
Q psy11734        414 VVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTES  493 (817)
Q Consensus       414 ~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (817)
                      .-|++.+.+.++..+..++++|+-++..+.+..+                                  +.          
T Consensus       230 LGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~----------------------------------~~----------  265 (539)
T PF03137_consen  230 LGFLICGILLFLSAIPLFFFPKKLPGTSERQEEK----------------------------------ES----------  265 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHcCCccCCCcccccchh----------------------------------hh----------
Confidence            5667777777777888888887765541111000                                  00          


Q ss_pred             CCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhh
Q psy11734        494 CFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAH  573 (817)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~  573 (817)
                      ++...+ +...++..++...++..                                                  ..+ . 
T Consensus       266 ~~~~~~-~~~~~~~~~~~~~~~~~--------------------------------------------------~~~-~-  292 (539)
T PF03137_consen  266 SERKEE-DSDKDSFKDPKSKKSFG--------------------------------------------------KSI-K-  292 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhcchh-hhhhhcccccccccchh--------------------------------------------------hhh-h-
Confidence            000000 00000000000000000                                                  000 0 


Q ss_pred             cchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH-HH
Q psy11734        574 SGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL-IM  652 (817)
Q Consensus       574 ~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~-~~  652 (817)
                       +                .....+++++||.+....++..+......++.+++|.|++.+++.++.+++.+.....+ ++
T Consensus       293 -d----------------f~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~  355 (539)
T PF03137_consen  293 -D----------------FPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGA  355 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             -h----------------HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchh
Confidence             1                12346789999999999999999999999999999999999999999999988876664 78


Q ss_pred             HHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh-----------cC--------------------
Q psy11734        653 WLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV-----------GC--------------------  701 (817)
Q Consensus       653 ~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-----------~~--------------------  701 (817)
                      ++|.+++|++.+|++-+.    ++.-++..+...+........+...           +.                    
T Consensus       356 ~~G~llGG~ivkk~kl~~----~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~  431 (539)
T PF03137_consen  356 ALGILLGGYIVKKFKLSA----RGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCC  431 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             heehheEEEEEEEecCcH----HHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCcc
Confidence            899999999999987442    1222333322222221101111110           00                    


Q ss_pred             --------------c-h---HHHHHHHHHHHHHHhhhhhhhh-hhccccCCCchHHHHHHHHHHHHH-HHhHHHHHHHHh
Q psy11734        702 --------------N-T---SMVAICFTIGMAFMGFCYASIR-VNPIDLSPNFSGTIMALSNGLGCV-SGMVAPLTVGFL  761 (817)
Q Consensus       702 --------------~-~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~-g~~i~p~~~g~~  761 (817)
                                    + .   ....+.+++..+..+....+.. .....+.+++|+.+.|+...+..+ |.+-+|.+.|.+
T Consensus       432 ~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~i  511 (539)
T PF03137_consen  432 SSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAI  511 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHH
Confidence                          0 0   1111122222222233333333 333335558999999999877665 889999999999


Q ss_pred             hcCC
Q psy11734        762 TQNK  765 (817)
Q Consensus       762 ~~~~  765 (817)
                      .|..
T Consensus       512 iD~t  515 (539)
T PF03137_consen  512 IDST  515 (539)
T ss_dssp             ----
T ss_pred             Hhhh
Confidence            9984

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=98.82  E-value=7.4e-08  Score=101.09  Aligned_cols=147  Identities=17%  Similarity=0.139  Sum_probs=119.6

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---
Q psy11734        515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---  591 (817)
Q Consensus       515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---  591 (817)
                      ++|.++.|++.+...-+....+..++.|.++||+|||+..+...++.+++++. -..+  +++.|+++|++.|++.+   
T Consensus        63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~--~~~~L~~GRvlgGiaTSLLf  139 (354)
T PF05631_consen   63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSS--NYPVLLLGRVLGGIATSLLF  139 (354)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-Hhcc--ccHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999999999998864 4446  89999999999999999   


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       140 S~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN  219 (354)
T PF05631_consen  140 SAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN  219 (354)
T ss_pred             HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence                                                                                            


Q ss_pred             --c---Cc--------hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHH
Q psy11734        592 --L---ET--------PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMS  658 (817)
Q Consensus       592 --~---~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~  658 (817)
                        .   ..        .++.+.+||+++.+.....++-...|.+....++-++.  +-+...-|.+++.+....++|+.+
T Consensus       220 yg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~--~~~~~P~GlIFssFM~a~MlGS~l  297 (354)
T PF05631_consen  220 YGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDP--DDEELPLGLIFSSFMVAMMLGSSL  297 (354)
T ss_pred             CCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecC--CCCCCCchHHHHHHHHHHHHHHHH
Confidence              0   11        12346678999999999999999988887544444442  112334789999999999999988


Q ss_pred             HHHHHhhh
Q psy11734        659 SSALADYL  666 (817)
Q Consensus       659 ~g~l~dr~  666 (817)
                      ..++..|.
T Consensus       298 f~~l~s~~  305 (354)
T PF05631_consen  298 FSRLLSKS  305 (354)
T ss_pred             HHHHHhCC
Confidence            87666544

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=98.78  E-value=4.3e-08  Score=91.04  Aligned_cols=131  Identities=16%  Similarity=0.156  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhh
Q psy11734        647 LPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRV  726 (817)
Q Consensus       647 ~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (817)
                      ...++..++.+..|++.||+|||+.+          ..+.....++.+.....+ +.+.......+.+...+...+....
T Consensus         6 ~~~~~~~~~~~~~g~~~d~~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~   74 (141)
T TIGR00880         6 GYALGQLIYSPLSGLLTDRFGRKPVL----------LVGLFIFVLSTAMFALSS-NITVLIIARFLQGFGAAFALVAGAA   74 (141)
T ss_pred             eehhHHHHHHhhHHHHHhhcchhHHH----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            45678889999999999999987653          355555555555554443 5555555566666666666777777


Q ss_pred             hccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        727 NPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       727 ~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      ...|..| ++|+++.++.+....++..++|.+.+.+.+..+   |+..+++.+...+++.+...+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  137 (141)
T TIGR00880        75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG---WRAPFLFLAILALAAFILLAFL  137 (141)
T ss_pred             HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc---hHHHHHHHHHHHHHHHHHHhhc
Confidence            8888887 779999999999999999999999999988754   8888888887777776666554

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.66  E-value=3.7e-07  Score=102.35  Aligned_cols=131  Identities=21%  Similarity=0.299  Sum_probs=83.9

Q ss_pred             hhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHh---hcCcccchhhHHHHHHHHhHHHHHHHHhhhccCC-
Q psy11734        226 LPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFI---ARDILSRTNVRKVFATLGAVLPGVGALAASYVGC-  301 (817)
Q Consensus       226 ~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  301 (817)
                      ...|+++.+|.++.+...+.....+... ..++.|.++|-+-   .||        |..+.++.++..++...+...+. 
T Consensus        12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr--------~~Y~~i~~~~~~~~~~~~~~~~~~   82 (433)
T PF03092_consen   12 IYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRR--------KPYMIIGWLLGAVSALVLALLPAS   82 (433)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcc--------hHHHHHHHHHHHHHHHHHHhcccc
Confidence            3446778899999987776666665444 4788999999973   232        33456666666555555544433 


Q ss_pred             --ChhHHHHHHHHHHHHhhhcccccccccccc---CCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        302 --NTSMVAIFFTIGMAFMGFCYASIRVNPIDL---SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       302 --~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~---~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                        +.......+.+...+....-....+...|.   .|+.+|.-.+.....+.+|+.++..+.|.+.++.
T Consensus        83 ~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~  151 (433)
T PF03092_consen   83 ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF  151 (433)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC
Confidence              333344444444444444444444444443   3445888888999999999999999999887764

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>KOG2816|consensus

Probab=98.65  E-value=6e-06  Score=92.16  Aligned_cols=247  Identities=17%  Similarity=0.150  Sum_probs=176.6

Q ss_pred             HHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccc
Q psy11734        249 FLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNP  328 (817)
Q Consensus       249 ~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~  328 (817)
                      ++..++.++.-|.++||+|||..          +........+....+.+..   ++..+... ..++.........+++
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~----------L~~~~~~~~l~~~~~~~~~---~~~~~~~~-l~g~~~~~~s~~~a~v  137 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVV----------LLLPLFGTILPALCLLFQG---YWFFLLLG-LSGGFSAIFSVGFAYV  137 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhh----------HHHHHHHHHHhHHHHHHHH---HHHhhhcc-cccchhhhhhhhhhhe
Confidence            67888999999999999999975          4444444333333333322   22222111 1233334455557777


Q ss_pred             cccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCC
Q psy11734        329 IDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK  407 (817)
Q Consensus       329 ~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (817)
                      .|... ++|....|+.+..-..+..++|.+.+.+....                                          
T Consensus       138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~------------------------------------------  175 (463)
T KOG2816|consen  138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL------------------------------------------  175 (463)
T ss_pred             eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc------------------------------------------
Confidence            88666 79999999999999999999999988877653                                          


Q ss_pred             ccchhHHHHHHHHHHHHHhhhhheeecccccccccCC-------------------------CCchhHHHHHHHHHHHHH
Q psy11734        408 TLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNES-------------------------ILPARYVLGIMGCMGVTL  462 (817)
Q Consensus       408 ~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~il~~~~~~~~~  462 (817)
                         ++-.+|.+.+...+.+.+...++-|+..++.+++                         +.+.+...+.++....+.
T Consensus       176 ---~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~  252 (463)
T KOG2816|consen  176 ---GIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLS  252 (463)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHH
Confidence               5778899998888888877666665543222211                         112333444555555555


Q ss_pred             HHhhhhhcc-EEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhc
Q psy11734        463 ALMMRSCLA-TAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPG  541 (817)
Q Consensus       463 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~  541 (817)
                      ...+..... ...-++..                                   .+++++.+.+...+.......+++.+.
T Consensus       253 ~~~~~~~~~~~~~~yl~~-----------------------------------~f~w~~~~~s~~~~~~~~~~~i~~l~~  297 (463)
T KOG2816|consen  253 SLPEAGGASDVLLLYLKA-----------------------------------KFGWNKKEFSDLLSLVSILGIISQLLL  297 (463)
T ss_pred             HHHHhcCceeEEEEEEee-----------------------------------ecCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            555554444 33223344                                   899999999999888888888888888


Q ss_pred             h-hhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734        542 G-ILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED  591 (817)
Q Consensus       542 G-~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~  591 (817)
                      . .+...+|-|+++..|+..-.+.....++++  +.|+++...++.++...
T Consensus       298 ~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~--~~w~~~~~~v~~~~~~~  346 (463)
T KOG2816|consen  298 LPLLSSILGEKRLISLGLLSEFLQLLLFAFAT--ETWMMFAAGVVVALAGI  346 (463)
T ss_pred             HHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc--cchhhhHHHHHHHhhcc
Confidence            7 788899999999999999999999999999  99999999999888766

>KOG2325|consensus

Probab=98.62  E-value=6.8e-07  Score=98.34  Aligned_cols=114  Identities=23%  Similarity=0.193  Sum_probs=92.8

Q ss_pred             CCCchhHHHHHHHHHHHHHHHhhhhhccEEE-EeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734        444 SILPARYVLGIMGCMGVTLALMMRSCLATAI-TEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT  522 (817)
Q Consensus       444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  522 (817)
                      +.++.+|+.++++.+..++.....+.+.+.. |++.+                                  -|.+-+.+.
T Consensus        27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~----------------------------------lD~~A~~~f   72 (488)
T KOG2325|consen   27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQK----------------------------------LDPTATATF   72 (488)
T ss_pred             cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhh----------------------------------cCCCCCcch
Confidence            4467789998888888888877776655433 33322                                  156778888


Q ss_pred             HHHHHHHHHHHHHHhhhhchhhccccCc-hHHHHHHHHHHHHHHHHH-HHhh--hcchHHHHHHHHHHhhhcc
Q psy11734        523 QGVILSAFYYGYILTHIPGGILSQKFGG-KHTLGLGFLSTAIFTLLT-PLIA--HSGPVSMTVLRFLEGVGED  591 (817)
Q Consensus       523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~~l~~~~i~~~l~-~~a~--~~s~~~l~~~R~l~Gig~~  591 (817)
                      .|++.++..++.+++++.+|....|.+. |+.++.+.++..++.++. +++.  +.+.+.++++|++.|+|.+
T Consensus        73 fG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~  145 (488)
T KOG2325|consen   73 FGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG  145 (488)
T ss_pred             hhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc
Confidence            9999999999999999999999999997 889999999999999999 4442  3367889999999999988

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=98.62  E-value=6.2e-08  Score=89.91  Aligned_cols=137  Identities=17%  Similarity=0.159  Sum_probs=100.2

Q ss_pred             hhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccc
Q psy11734        243 VLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYA  322 (817)
Q Consensus       243 ~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~  322 (817)
                      +......++..++++..|++.||++||+.          ...+.....++.......+ +.+.......+.+...+...+
T Consensus         2 ~~~~~~~~~~~~~~~~~g~~~d~~g~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~   70 (141)
T TIGR00880         2 LLLAGYALGQLIYSPLSGLLTDRFGRKPV----------LLVGLFIFVLSTAMFALSS-NITVLIIARFLQGFGAAFALV   70 (141)
T ss_pred             EEEEeehhHHHHHHhhHHHHHhhcchhHH----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHH
Confidence            34556788899999999999999999885          5556555555555554443 444444455555555555566


Q ss_pred             cccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccccc
Q psy11734        323 SIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVG  401 (817)
Q Consensus       323 ~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (817)
                      .......|..| ++|+++.++.+....+|..++|.+.+.+.+..                                    
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------------------------  114 (141)
T TIGR00880        71 AGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL------------------------------------  114 (141)
T ss_pred             hHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc------------------------------------
Confidence            66666777665 78999999999999999999999988876543                                    


Q ss_pred             ccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734        402 FLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS  435 (817)
Q Consensus       402 ~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~  435 (817)
                               +|+..|++.+.+.+++.+...++.+
T Consensus       115 ---------~~~~~~~~~~~~~~~~~~~~~~~~~  139 (141)
T TIGR00880       115 ---------GWRAPFLFLAILALAAFILLAFLLP  139 (141)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHhhcCC
Confidence                     5888899888887777666555443

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=98.56  E-value=8e-05  Score=82.18  Aligned_cols=393  Identities=11%  Similarity=0.040  Sum_probs=212.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHH
Q psy11734        204 PVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFAT  283 (817)
Q Consensus       204 ~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~  283 (817)
                      ..+.+.++.++..+.-=..-+-.|.++.+.+.-+-.-.+.+.....+..++.++.-|.+.||..|.+..   ..-.+.-.
T Consensus         3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~---~~~l~~Qn   79 (432)
T PF06963_consen    3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVI---RTSLVVQN   79 (432)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhH---HHHHHHHH
Confidence            345677788888888888888899999998776766677777788888999999999999998877642   11111112


Q ss_pred             HHhHHHHHHHHhhhccCCC----hhHHHHHHH--HHHHH--hhhcccccccc-------ccccCCCchhHHHHHHHhhhh
Q psy11734        284 LGAVLPGVGALAASYVGCN----TSMVAIFFT--IGMAF--MGFCYASIRVN-------PIDLSPNFSGTIMALSNGLGC  348 (817)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--l~~~~--~g~~~~~~~~~-------~~~~~p~~~g~a~g~~~~~~~  348 (817)
                      .+..++...++.+......    .......+.  +..+.  .........+.       ..+-.++.....++.+.-.-+
T Consensus        80 ~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL  159 (432)
T PF06963_consen   80 LSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDL  159 (432)
T ss_pred             HHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHH
Confidence            2333333333322222211    111111111  11111  11112211111       122234566677777777777


Q ss_pred             hcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhh
Q psy11734        349 VSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNV  428 (817)
Q Consensus       349 lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~  428 (817)
                      +...++|.+.|.+.+..                                             +......+.++..+++.+
T Consensus       160 ~ckllaPl~vG~l~t~~---------------------------------------------s~~~~~~~i~~~N~~S~~  194 (432)
T PF06963_consen  160 FCKLLAPLFVGLLMTFA---------------------------------------------SPVIAAIFIAGWNLASVF  194 (432)
T ss_pred             HHHHHHHHHHHHHhhcc---------------------------------------------CHHHHHHHHHHHHHHHHH
Confidence            79999999999888764                                             466677777777777776


Q ss_pred             hheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecc
Q psy11734        429 FFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKT  508 (817)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (817)
                      +-+++-++-.+..                                 |++.+..+..+.++.++.+               
T Consensus       195 vEy~~l~~VY~~~---------------------------------P~L~~~~~~~~~~~~~~~~---------------  226 (432)
T PF06963_consen  195 VEYFLLARVYNSV---------------------------------PALAVKKRSSESESSSDEE---------------  226 (432)
T ss_pred             HHHHHHHHHHHhC---------------------------------hHhcCCCCCcccccccccc---------------
Confidence            6444433322111                                 1111100000000000000               


Q ss_pred             cccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhh
Q psy11734        509 YTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGV  588 (817)
Q Consensus       509 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gi  588 (817)
                            +..-+..+....                                     ..+-..+.+                
T Consensus       227 ------~~~~~~~~~~~~-------------------------------------~~~~~~~~~----------------  247 (432)
T PF06963_consen  227 ------SSSESSSDPSIL-------------------------------------KRLWNPLRT----------------  247 (432)
T ss_pred             ------ccccccchhhHH-------------------------------------HHHHHHHHH----------------
Confidence                  000000000000                                     000000111                


Q ss_pred             hcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734        589 GEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIV  668 (817)
Q Consensus       589 g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~  668 (817)
                         ...+++..+++|.+... ++..+.+...-++...+..|+... |+++...|.+=+...+.++.|++...++.+|+|.
T Consensus       248 ---~~~~w~~Y~~q~vflas-~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGl  322 (432)
T PF06963_consen  248 ---IIRGWRTYFRQPVFLAS-FALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGL  322 (432)
T ss_pred             ---HhccHHHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence               12346667777755444 444444444555677788999985 9999999999999999999999999999999997


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHhhcCch--HH----HHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHH
Q psy11734        669 RDILSRTNVRKVFATLGAVLPGVGALAASYVGCNT--SM----VAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMA  741 (817)
Q Consensus       669 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g  741 (817)
                      .+.-      .+....-..+..++...+ +.+.++  ..    .+....+.-.+.-..--......+|..| ++||+..|
T Consensus       323 vr~G------~~~l~~q~~~L~~~v~~~-~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~g  395 (432)
T PF06963_consen  323 VRAG------LWSLWWQWVCLALCVVSF-WAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSG  395 (432)
T ss_pred             hhhH------HHHHHHHHHHHHHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHH
Confidence            6542      222222222222222222 333222  11    2222222222222222333355566555 88999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHhhcC
Q psy11734        742 LSNGLGCVSGMVAPLTVGFLTQN  764 (817)
Q Consensus       742 ~~~~~~~~g~~i~p~~~g~~~~~  764 (817)
                      +.+..+++...+.-.+ +.+...
T Consensus       396 vq~sl~~lf~ll~~~~-~ii~~~  417 (432)
T PF06963_consen  396 VQNSLQSLFELLSFVL-TIIFPR  417 (432)
T ss_pred             HHHHHHHHHHHHHHHH-HhccCC
Confidence            9999999987776544 344444

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG2816|consensus

Probab=98.42  E-value=6.7e-07  Score=99.74  Aligned_cols=263  Identities=17%  Similarity=0.155  Sum_probs=180.1

Q ss_pred             ccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhheeccCCCC
Q psy11734         10 GTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKS   89 (817)
Q Consensus        10 g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~   89 (817)
                      +.++....++++|....++|.+..|+.......+..++|.+++.+.. ..|--.+|++.....++..+...+++||+-.+
T Consensus       127 ~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~-~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~  205 (463)
T KOG2816|consen  127 SAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK-FLGIALVFLIAAASGILSLLYMLLFLPESLQE  205 (463)
T ss_pred             hhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hcCchHHHHHHHHHHHHHHHHHhhccccccCc
Confidence            44678889999999999999999999999999999999999999999 89999999999998888888888888775322


Q ss_pred             CCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhh
Q psy11734         90 HPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTP  169 (817)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (817)
                      +...+     ....     ....+....|..                                                 
T Consensus       206 ~~~~~-----~~~~-----~~~~~~~~~~~~-------------------------------------------------  226 (463)
T KOG2816|consen  206 KERSD-----ATLR-----ELTPGSLDSSHV-------------------------------------------------  226 (463)
T ss_pred             ccccc-----cccc-----ccCCCcccchhh-------------------------------------------------
Confidence            21110     0000     000011001100                                                 


Q ss_pred             cccCcCCchhhhHHhhhccCcccCchHH---HHhhchhHHHHHHHHHHHHHHHH-HHhhchhhHHHHhhCCcccccchhh
Q psy11734        170 LVAHSGPVSMTVLRFLEGVGEDLKTPWA---AILYSLPVWSLIISEVGHDYGLY-LISTDLPKYMSEVIGLSVAENGVLS  245 (817)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~i~~~~~~~~~~-~~~~~~p~~l~~~~g~s~~~ag~~~  245 (817)
                                             .++++   ..=.+|..+......+.....-. +..-..+.|+...++++..+.+.+.
T Consensus       227 -----------------------~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~  283 (463)
T KOG2816|consen  227 -----------------------ADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLL  283 (463)
T ss_pred             -----------------------hhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHH
Confidence                                   01111   11123334443333333333332 2332457788888999999999989


Q ss_pred             hhhHHHHHHHHhhhH-HHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccc
Q psy11734        246 ALPFLIMWLVSMSSS-ALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASI  324 (817)
Q Consensus       246 ~~~~i~~~ig~~~~G-~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~  324 (817)
                      +..+....+++.+.. .+..+++.++.          +..|+..-.+......+... .+..+....... +.....+..
T Consensus       284 ~~~~~~~~i~~l~~~~~l~~~l~~~~~----------i~lGl~~~~~~~~~~af~~~-~w~~~~~~v~~~-~~~~~~pa~  351 (463)
T KOG2816|consen  284 SLVSILGIISQLLLLPLLSSILGEKRL----------ISLGLLSEFLQLLLFAFATE-TWMMFAAGVVVA-LAGIVFPAI  351 (463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhH----------hhHHHHHHHHHHHHHHHhcc-chhhhHHHHHHH-hhcchhHHH
Confidence            989999999998887 66677787775          88888888887777777653 333333333222 333444555


Q ss_pred             cccc-cccCCCchhHHHHHHHhhhhhcccccccccceecccccc
Q psy11734        325 RVNP-IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIIS  367 (817)
Q Consensus       325 ~~~~-~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~  367 (817)
                      .+.. ....++++|++.++...++.+.+.++|.+.+.+...+..
T Consensus       352 ~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~  395 (463)
T KOG2816|consen  352 RAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLD  395 (463)
T ss_pred             HhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence            4444 446679999999999999999999999999988776643

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.29  E-value=1.5e-05  Score=81.19  Aligned_cols=140  Identities=16%  Similarity=0.086  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHH
Q psy11734        613 VGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVG  692 (817)
Q Consensus       613 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~  692 (817)
                      .......|.+..|.|. +++.+|+|+++...+.....++..+| ++.|.+.||+|.+.+          +.++.+...++
T Consensus        12 ~~~~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~----------l~iG~~~~~~G   79 (250)
T PF06813_consen   12 QLCSGTTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVV----------LLIGAVLGFVG   79 (250)
T ss_pred             HHhcCcccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHH----------HHHHHHHHHHH
Confidence            3444567777878876 66779999999999998888998875 888999999997643          34777776676


Q ss_pred             HHHHHhhcC-----ch-HHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcC
Q psy11734        693 ALAASYVGC-----NT-SMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  764 (817)
Q Consensus       693 ~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~  764 (817)
                      ...+.....     .+ |.......+.+......+........+.+|++||++.|+.-....+++.+-..+...+.+.
T Consensus        80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~  157 (250)
T PF06813_consen   80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD  157 (250)
T ss_pred             HHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence            666554321     12 3333333333333223333333445577899999999999999999887777776666655

>KOG2325|consensus

Probab=98.29  E-value=1.6e-06  Score=95.55  Aligned_cols=88  Identities=13%  Similarity=0.144  Sum_probs=69.0

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-cccCcc-----------hhHHHH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-FTASWA-----------NVFYIF   68 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-~~~gWr-----------~~f~i~   68 (817)
                      .|++.|+|.| ......+++++.-..++|.|+++..+.+..+|.++||.++..+.. +..||.           .+=|++
T Consensus       136 ~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m  214 (488)
T KOG2325|consen  136 ARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLM  214 (488)
T ss_pred             HHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHH
Confidence            3899999988 677788899998889999999999999999999999988877765 222332           244677


Q ss_pred             hhhHHHHHhhhhheeccCCCC
Q psy11734         69 GAIAVLWFAFWCILCFNDPKS   89 (817)
Q Consensus        69 ~~~~~i~~~~~~~~~~~~p~~   89 (817)
                      .++.++..++.+++++|.+++
T Consensus       215 ~i~~i~~~v~i~~~f~E~~~~  235 (488)
T KOG2325|consen  215 AILWIIYIVIILFFFKEVYRG  235 (488)
T ss_pred             HHHHHHHHHHHHhheeecccC
Confidence            777777777778888776543

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.19  E-value=3.4e-06  Score=94.58  Aligned_cols=298  Identities=14%  Similarity=0.095  Sum_probs=161.5

Q ss_pred             chhhhhhhhccC--CCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhheeccCCCCCC
Q psy11734         14 PALCTLLAQWSP--PNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHP   91 (817)
Q Consensus        14 ~~~~~~i~~~~p--~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~   91 (817)
                      ..+=+.+.|.-.  +++||..++.......+|.+++..++|.+.+ ..++|+.|.+.+++..+..+..+++.+|+++.++
T Consensus       105 V~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~-~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~  183 (433)
T PF03092_consen  105 VAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD-SFGPQGVFLISAALPLLMLIVALFLLEERKVRPA  183 (433)
T ss_pred             HhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-cCCCeEEehHHHHHHHHHHHHHHHhhhhcccccc
Confidence            334445555542  3448899999999999999999999999999 9999999999988888777666666554221111


Q ss_pred             CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhhcc
Q psy11734         92 YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLV  171 (817)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (817)
                      .    +.....++...      ...+                                                      
T Consensus       184 ~----~~~~~~~~~~~------~~~~------------------------------------------------------  199 (433)
T PF03092_consen  184 D----EVFSFGKEEVP------CLFG------------------------------------------------------  199 (433)
T ss_pred             c----hhhcccccccc------hhhH------------------------------------------------------
Confidence            1    00000000000      0000                                                      


Q ss_pred             cCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHH-HHHHHHHHHHHhhchhhHHHHhhC---Ccccccchhhhh
Q psy11734        172 AHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIIS-EVGHDYGLYLISTDLPKYMSEVIG---LSVAENGVLSAL  247 (817)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~-~~~~~~~~~~~~~~~p~~l~~~~g---~s~~~ag~~~~~  247 (817)
                                      .-++.....++.+++|.+|...+. .++............-.+..+..+   +|+...+.+...
T Consensus       200 ----------------~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~v  263 (433)
T PF03092_consen  200 ----------------SFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIV  263 (433)
T ss_pred             ----------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHH
Confidence                            000012235678888888876662 222111111100000011223345   777777777766


Q ss_pred             hHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc---------CCChhHHHHHHHHHHHHhh
Q psy11734        248 PFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV---------GCNTSMVAIFFTIGMAFMG  318 (817)
Q Consensus       248 ~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~g  318 (817)
                      ..++.++|..+..+...+..-         |+++.....+.....+.-+...         ++. +.....-.+.....+
T Consensus       264 g~~~~l~g~~~y~~~~~~~~~---------R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~-~f~lgd~~l~~~~~~  333 (433)
T PF03092_consen  264 GSIASLLGILLYRKYFSNWSW---------RRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQ-WFALGDTILEEVIGM  333 (433)
T ss_pred             HHHHHHHHHHHHHHHHhCCCH---------HHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCe-EEEEEhHHHHHHHHH
Confidence            666666666665554333322         3333333333222222211111         111 222222222223333


Q ss_pred             hc-cccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccc
Q psy11734        319 FC-YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAP  397 (817)
Q Consensus       319 ~~-~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (817)
                      .. .|.......-.++..-|+.+++..++.++|..++..+...+.+..+ .+                            
T Consensus       334 i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~-vt----------------------------  384 (433)
T PF03092_consen  334 IAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG-VT----------------------------  384 (433)
T ss_pred             HHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CC----------------------------
Confidence            33 3333334444555799999999999999999999999888877764 10                            


Q ss_pred             ccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734        398 LTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ  439 (817)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~  439 (817)
                              +.+-++.....++..++.++.+++..++.++++.
T Consensus       385 --------~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~~  418 (433)
T PF03092_consen  385 --------RDDFSNLWLLILICSVIQLLPLPLLFLLPPQKRI  418 (433)
T ss_pred             --------cccccchHHHHHHHHHHHHHHHHHHHHcCCCchh
Confidence                    0001245556667777777777777677665543

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>KOG3098|consensus

Probab=98.14  E-value=0.00037  Score=76.90  Aligned_cols=224  Identities=15%  Similarity=0.025  Sum_probs=151.9

Q ss_pred             HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------------
Q psy11734        527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---------------  591 (817)
Q Consensus       527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---------------  591 (817)
                      .++-...+.+++++.+.+.|+.|+|+.++++...+....+..-+-   |-+-+++...+.|+|.+               
T Consensus        56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~---N~y~~yfssallG~Gaallw~GqG~ylt~~st  132 (461)
T KOG3098|consen   56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP---NSYYLYFSSALLGFGAALLWTGQGGYLTSNST  132 (461)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc---chHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence            677788889999999999999999999999999999888877665   67789999999999999               


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~  212 (461)
T KOG3098|consen  133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPS  212 (461)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCc
Confidence                                                                                            


Q ss_pred             -------cCc--hhH-------HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH--hCCCh-hHHHHHHHHHHHHH
Q psy11734        592 -------LET--PWA-------AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQV--IGLSV-AENGVLSALPFLIM  652 (817)
Q Consensus       592 -------~~~--~~~-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~s~-~~~~~~~~~~~~~~  652 (817)
                             +..  +.+       +.+++|+...+....+.......-.....|+.+...  ++.+. ...+......+++.
T Consensus       213 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~  292 (461)
T KOG3098|consen  213 KDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGE  292 (461)
T ss_pred             cchhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHH
Confidence                   011  222       344566666666655555444444555666665543  23332 33455566677888


Q ss_pred             HHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh-cCc----------------hHHHHHHHHHHHH
Q psy11734        653 WLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV-GCN----------------TSMVAICFTIGMA  715 (817)
Q Consensus       653 ~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~  715 (817)
                      .++....+.+++|+.+..       |+..+..+..+..+.+++.... +.+                .....++..+.+.
T Consensus       293 v~~g~~~~~l~~rir~fg-------~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~  365 (461)
T KOG3098|consen  293 VIGGLDFSILSKRIRGFG-------RKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGF  365 (461)
T ss_pred             HHHHHHHHHHhhhhhhcc-------cCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhh
Confidence            888888888888876543       3334445555544444443322 101                1233344444555


Q ss_pred             HHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHH
Q psy11734        716 FMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGF  760 (817)
Q Consensus       716 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~  760 (817)
                      .-.......+..+....|++|.++.++..+-+.+++.++-.....
T Consensus       366 ~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~  410 (461)
T KOG3098|consen  366 GDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPY  410 (461)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            555666667788888889999999999999888888777665543

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=98.11  E-value=0.00085  Score=72.90  Aligned_cols=362  Identities=10%  Similarity=0.006  Sum_probs=203.5

Q ss_pred             hchhhHHHHh-hCCcccccchhhhhhHH-HHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCC
Q psy11734        224 TDLPKYMSEV-IGLSVAENGVLSALPFL-IMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGC  301 (817)
Q Consensus       224 ~~~p~~l~~~-~g~s~~~ag~~~~~~~i-~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (817)
                      .++..|+.+. +|++.+|..--..|... ..++.-+....++|..+.|++          ++++.+...+...++.+.. 
T Consensus        24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpv----------iil~~~~~i~t~~lll~~~-   92 (412)
T PF01770_consen   24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPV----------IILQALSYIITWLLLLFGT-   92 (412)
T ss_pred             ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHH----------HHHHHHHHHHHHHHHHHHC-
Confidence            4666677775 89999988766666543 455666678889999998885          5666655555555555554 


Q ss_pred             ChhHHHHHHHHHHHHhhhccccccccc-cccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccc
Q psy11734        302 NTSMVAIFFTIGMAFMGFCYASIRVNP-IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGT  380 (817)
Q Consensus       302 ~~~~~~~~~~l~~~~~g~~~~~~~~~~-~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~  380 (817)
                      +...+-+.-+..+..... -.....++ ..++|++--++++.......+|-.++..++..+....               
T Consensus        93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~---------------  156 (412)
T PF01770_consen   93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFG---------------  156 (412)
T ss_pred             cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------
Confidence            444444444433333322 22233444 3355677677777777776666666666555444321               


Q ss_pred             hhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHHHH
Q psy11734        381 IMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGV  460 (817)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~  460 (817)
                                                  ..++....++......++.+..+++++.+++..-.+..+..-.         
T Consensus       157 ----------------------------~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~---------  199 (412)
T PF01770_consen  157 ----------------------------GVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQD---------  199 (412)
T ss_pred             ----------------------------CCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccc---------
Confidence                                        1268889999999899999999998876554321111100000         


Q ss_pred             HHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhh
Q psy11734        461 TLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIP  540 (817)
Q Consensus       461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~  540 (817)
                                       .+ +..   .+.++...   ++.   .++++.+.   +.+ +.                    
T Consensus       200 -----------------~~-~~~---~~~~~~~~---~~~---~~~~~~~~---~~~-~~--------------------  228 (412)
T PF01770_consen  200 -----------------AN-ESE---SDKMNESP---ESS---SSTEKSPS---TES-SS--------------------  228 (412)
T ss_pred             -----------------cc-ccc---cccccccc---ccc---cccccCcc---ccc-ch--------------------
Confidence                             00 000   00000000   000   00000000   000 00                    


Q ss_pred             chhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHH
Q psy11734        541 GGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFY  620 (817)
Q Consensus       541 ~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  620 (817)
                               ++.             .+.-+                      ...+++..++|+++.-.+=+.+...+++
T Consensus       229 ---------~~~-------------~l~~l----------------------~~~~~~~y~~~~ll~WSlWWa~atcgy~  264 (412)
T PF01770_consen  229 ---------RKS-------------VLRLL----------------------WKDFKSCYSNPRLLLWSLWWAFATCGYY  264 (412)
T ss_pred             ---------HHH-------------HHHHH----------------------HHHHHHHhcCchHHHHHHHHHHHHhHHH
Confidence                     000             00000                      1346777888887666666667777777


Q ss_pred             HHHhhHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHh
Q psy11734        621 LISSDLPKYMSQV--IGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASY  698 (817)
Q Consensus       621 ~~~~~~p~~l~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~  698 (817)
                      -+..+.....++.  .+-+..-.|..-+...+.+.++.+..|++..++.+-        ....+....++.+.+++++.+
T Consensus       265 qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~--------~~l~l~~~S~l~a~~L~lm~~  336 (412)
T PF01770_consen  265 QVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW--------GELALGVFSLLQAGLLFLMSF  336 (412)
T ss_pred             HHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH--------HHHHHHHHHHHHHHHHHHHHH
Confidence            7777777777664  122333456677778888888999999985555442        223334444455555555655


Q ss_pred             hcCchHHHHHHHHHHHHHHhhhhhhhh-hhccccCCCchHHHHHHHHHHHHHHHhH
Q psy11734        699 VGCNTSMVAICFTIGMAFMGFCYASIR-VNPIDLSPNFSGTIMALSNGLGCVSGMV  753 (817)
Q Consensus       699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~g~~i  753 (817)
                      .. +.|......++......+..+... .++.....+.-|...|+++++..+-..+
T Consensus       337 t~-~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQti  391 (412)
T PF01770_consen  337 TG-NIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTI  391 (412)
T ss_pred             hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence            54 677777777777666665554444 3334444577888888877765554433

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>KOG4332|consensus

Probab=98.05  E-value=6.4e-05  Score=74.56  Aligned_cols=257  Identities=17%  Similarity=0.066  Sum_probs=144.1

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---
Q psy11734        515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---  591 (817)
Q Consensus       515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---  591 (817)
                      .++..+.|+|.+.-.-+-...+...+.|.++||-|||+..+.-.+.+.++ ++.-.++  .+-.|+++|++-|+..+   
T Consensus        66 tYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLs-CiTKhSp--qYkVLmVGR~LGGiaTsLLF  142 (454)
T KOG4332|consen   66 TYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILS-CITKHSP--QYKVLMVGRVLGGIATSLLF  142 (454)
T ss_pred             hcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHH-HHhhcCC--ceEEEeehhhhhhHHHHHHH
Confidence            67778888888777666667778888899999999999765544444332 2223344  67789999999999998   


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       143 SaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~E  222 (454)
T KOG4332|consen  143 SAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSE  222 (454)
T ss_pred             HHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhh
Confidence                                                                                            


Q ss_pred             ---cCch-----------hHHhhcCHhHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHH
Q psy11734        592 ---LETP-----------WAAILSSLPVWSLIISEVGHDYGFYLIS-SDLPKYMSQVIGLSVAENGVLSALPFLIMWLVS  656 (817)
Q Consensus       592 ---~~~~-----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~  656 (817)
                         ....           .+.+.+++++.++.-....+-...|.+. .|-|..--+..+   .--|.+++-+.++.++|+
T Consensus       223 Nygdps~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~---iPhGfiFatFMlASmLGS  299 (454)
T KOG4332|consen  223 NYGDPSENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASMLGS  299 (454)
T ss_pred             ccCChhhhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc---CCchhHHHHHHHHHHHhh
Confidence               0000           1123445555544444444444444443 445542111111   224678888888888888


Q ss_pred             HHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh----c--CchHHHHHHHHHHHHHHhhhhhhhhhhccc
Q psy11734        657 MSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV----G--CNTSMVAICFTIGMAFMGFCYASIRVNPID  730 (817)
Q Consensus       657 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (817)
                      -+..++..|-..|.-        ..+.+.+.+..+.+.+....    +  .++....+.+.+.-.+.+...|.+.-.-.+
T Consensus       300 Sla~Rl~s~s~~~ve--------~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsq  371 (454)
T KOG4332|consen  300 SLASRLLSRSSPKVE--------SYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQ  371 (454)
T ss_pred             HHHHHHHhcCCcccc--------hHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHh
Confidence            888777766543311        11223444444433333322    1  123445666666667777777777777777


Q ss_pred             cCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHH
Q psy11734        731 LSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFF  788 (817)
Q Consensus       731 ~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~  788 (817)
                      .-| +.|++.+-..-.=-++-..++-+.  .=.|... ..-+..|-++.+...++.+..
T Consensus       372 yIPEearstimNfFRvPLnifvClvLyn--lh~~~~p-~~tr~mf~icS~~~~~a~i~~  427 (454)
T KOG4332|consen  372 YIPEEARSTIMNFFRVPLNIFVCLVLYN--LHVDAFP-TTTRNMFGICSAFLFVASILQ  427 (454)
T ss_pred             hCCHHHHhhhhhheechhhHhhhhhhee--cccccCc-cccchhhhhhHHHHHHHHHHH
Confidence            777 668776544332222222222111  0011111 112456666666666654443

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=97.98  E-value=0.00053  Score=72.49  Aligned_cols=251  Identities=13%  Similarity=0.044  Sum_probs=136.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734        202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF  281 (817)
Q Consensus       202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~  281 (817)
                      ++++...........+..-...+  ..| + .+|++..+.+.+.........+...+.|.++||+|||+.          
T Consensus        36 qr~yl~vY~La~~aDWLQGpY~Y--~LY-~-~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~----------  101 (354)
T PF05631_consen   36 QRKYLLVYLLAMAADWLQGPYLY--ALY-E-SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA----------  101 (354)
T ss_pred             HHHHHHHHHHHHHHHHhhcchhH--HHH-H-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH----------
Confidence            34455555444444433322222  223 3 489999999999999999999999999999999999985          


Q ss_pred             HHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccc--cccc----cccCCCchhHHHHHHHhhhh-hccccc
Q psy11734        282 ATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASI--RVNP----IDLSPNFSGTIMALSNGLGC-VSGMVA  354 (817)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~--~~~~----~~~~p~~~g~a~g~~~~~~~-lg~~~~  354 (817)
                      ++...++..++++.-.  .++....++.=.+++......++..  +...    .+.+++..+...+...+..+ +-+..+
T Consensus       102 cl~~cily~~scl~k~--~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~a  179 (354)
T PF05631_consen  102 CLLFCILYSLSCLTKH--SSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGA  179 (354)
T ss_pred             HHHHHHHHHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHH
Confidence            5555555555544322  2245555555455555444444433  2222    22333445555555443322 222333


Q ss_pred             ccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734        355 PLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG  434 (817)
Q Consensus       355 ~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~  434 (817)
                      ..++..+.|..+                                           .+-...|.....+.+++.++.....
T Consensus       180 Gv~a~~l~~~~~-------------------------------------------~g~vaPF~~a~~~l~~~~~~I~~~W  216 (354)
T PF05631_consen  180 GVVANVLADWFG-------------------------------------------FGPVAPFDAAIVLLAVAAVLILKTW  216 (354)
T ss_pred             hHHHHHHHHHhC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHhcc
Confidence            333333333321                                           1335577777777777776655544


Q ss_pred             ccccccccCC--C-C--c-------hhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCc
Q psy11734        435 SGEVQYWNES--I-L--P-------ARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNH  502 (817)
Q Consensus       435 ~~~~~~~~~~--~-~--~-------~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (817)
                      +|+.++.+++  . .  +       .+..++ .+.+...+-....+.+-....+..++.                     
T Consensus       217 ~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril-~LG~~qslFE~smy~FVflWtPaL~~~---------------------  274 (354)
T PF05631_consen  217 PENYGDTSSSSSLSGSFREAWRAILSDPRIL-LLGLIQSLFEGSMYLFVFLWTPALDPD---------------------  274 (354)
T ss_pred             cccCCCcccccchHHHHHHHHHHHHcCchhH-HHHHHHHHHHHHHHHheeeeeceecCC---------------------
Confidence            5544331111  1 0  0       112222 222333333334444444443332200                     


Q ss_pred             eeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhcccc
Q psy11734        503 TVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKF  548 (817)
Q Consensus       503 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~  548 (817)
                                  +   .+.-.|++.+.|+.+..+|+-+..++..|-
T Consensus       275 ------------~---~~~P~GlIFssFM~a~MlGS~lf~~l~s~~  305 (354)
T PF05631_consen  275 ------------D---EELPLGLIFSSFMVAMMLGSSLFSRLLSKS  305 (354)
T ss_pred             ------------C---CCCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence                        1   122379999999999999999998766543

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=97.92  E-value=4.5e-05  Score=77.73  Aligned_cols=137  Identities=18%  Similarity=0.130  Sum_probs=93.2

Q ss_pred             HHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHH
Q psy11734        214 GHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGA  293 (817)
Q Consensus       214 ~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~  293 (817)
                      ...+..|.+..|-|..-+ .+|+|..|...+.....++..+ ++..|.+.||.+++..          +.+|.+...++.
T Consensus        13 ~~~Gt~Y~Fs~yS~~Lk~-~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~----------l~iG~~~~~~GY   80 (250)
T PF06813_consen   13 LCSGTTYTFSAYSPQLKS-RLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVV----------LLIGAVLGFVGY   80 (250)
T ss_pred             HhcCcccchhhhhHHHHH-HhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHH----------HHHHHHHHHHHH
Confidence            455677888888887665 5899999999999999998876 5889999999999875          677777777766


Q ss_pred             HhhhccCC------ChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceec
Q psy11734        294 LAASYVGC------NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLT  362 (817)
Q Consensus       294 ~~~~~~~~------~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~  362 (817)
                      ..+...-.      +.+.+.....+++.+.....+.........+|++||++.|+.-....+++++-.++...+.
T Consensus        81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f  155 (250)
T PF06813_consen   81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFF  155 (250)
T ss_pred             HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence            66544311      2223333333332222222222222233456889999999999999988887777655444

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=97.90  E-value=0.00023  Score=83.36  Aligned_cols=166  Identities=11%  Similarity=0.072  Sum_probs=120.7

Q ss_pred             HHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcccccccchhhHHHHHHHHHHHHHHHHHH
Q psy11734        618 GFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYL-IVRDILSRTNVRKVFATLGAVLPGVGALAA  696 (817)
Q Consensus       618 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~  696 (817)
                      ++|++...+..|+.+.+|++...+..++..+....-+...++|+++|++ |+++.+          ..+.++..++..++
T Consensus         2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI----------l~~~ii~~lG~~ll   71 (654)
T TIGR00926         2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI----------LYLSIVYVVGHALL   71 (654)
T ss_pred             ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHHHHHHHHHHHHH
Confidence            5678888899999999999999999888888888899999999999995 544433          46666666666665


Q ss_pred             HhhcCc----h---HHHHHHHHHHHHHHhhhhhhhhhhccccCC-C---chHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy11734        697 SYVGCN----T---SMVAICFTIGMAFMGFCYASIRVNPIDLSP-N---FSGTIMALSNGLGCVSGMVAPLTVGFLTQNK  765 (817)
Q Consensus       697 ~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~  765 (817)
                      .....+    .   ......+.+..++.+..-+...+...|.++ +   .+-....+.....++|+.+++.+.+++.+..
T Consensus        72 ai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~  151 (654)
T TIGR00926        72 SFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV  151 (654)
T ss_pred             HhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            543211    1   123334444555555556666666666554 2   3778888889999999999999999987553


Q ss_pred             c----cccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        766 T----LLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       766 g----~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                      +    ..+|..+|.+.+++.+++.+.+...++
T Consensus       152 ~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k  183 (654)
T TIGR00926       152 GCFGCQDCYPLAFGVPAILMILALIVFMAGSK  183 (654)
T ss_pred             cccccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence            1    124889999999999998888766543

>KOG0637|consensus

Probab=97.90  E-value=6e-05  Score=81.00  Aligned_cols=382  Identities=16%  Similarity=0.118  Sum_probs=207.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH----hhcCcccchhhHH
Q psy11734        204 PVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF----IARDILSRTNVRK  279 (817)
Q Consensus       204 ~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~----g~r~~~~~~~~~~  279 (817)
                      +.+......+...+++..=..|.|+|+++ .|.+....+.+.....+.+.+.+++.|..+||.    ||||.        
T Consensus        33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP--------  103 (498)
T KOG0637|consen   33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP--------  103 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccc--------
Confidence            34445555555666677777899999998 599999999988888899999999999999984    55554        


Q ss_pred             HHHHHHhHHHHHHHHhhhccCC-------C-----hhHHHHHHHHHH----HHhhhccccccccccccCC-CchhH-HHH
Q psy11734        280 VFATLGAVLPGVGALAASYVGC-------N-----TSMVAIFFTIGM----AFMGFCYASIRVNPIDLSP-NFSGT-IMA  341 (817)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~~~l~~----~~~g~~~~~~~~~~~~~~p-~~~g~-a~g  341 (817)
                       ++..+.....+++.++.+..+       +     ....+....++.    +.........-+...|+.. .++.+ +++
T Consensus       104 -fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans  182 (498)
T KOG0637|consen  104 -FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANS  182 (498)
T ss_pred             -hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccch
Confidence             677777777777776655321       1     123333333333    3333334444556666554 34444 888


Q ss_pred             HHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHH
Q psy11734        342 LSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFL  421 (817)
Q Consensus       342 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~  421 (817)
                      ...++..+|+.+|-...++.--+.        .-.+..                 ....     +......+..|.....
T Consensus       183 ~f~~f~avGnvLGY~~g~y~~~~~--------~~~Ft~-----------------~~~~-----~~~C~~~~~~~~~~v~  232 (498)
T KOG0637|consen  183 VFSFFMAVGNVLGYALGSYLGLYK--------IFPFTL-----------------TTAC-----DLYCANLKLCFFLEVT  232 (498)
T ss_pred             hHHHHHHhcceeeeecccccCceE--------EeehHH-----------------HHHH-----HHHHHHHHHHHHHhhh
Confidence            888888888888777655221110        000000                 0000     0001234444444444


Q ss_pred             HHHHhhhhheeecccccccccC---------------------CCC-chhHHHHHH---HHHHH---HHHHhhhhhccEE
Q psy11734        422 ALVISNVFFVLFGSGEVQYWNE---------------------SIL-PARYVLGIM---GCMGV---TLALMMRSCLATA  473 (817)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~---------------------~~~-~~~~~il~~---~~~~~---~~~~~~~~~~~~~  473 (817)
                      +..+.-...+.-.++ ++...+                     +.+ +..|.+.+.   .++++   ++-+-|.+.=   
T Consensus       233 L~~i~~~~~l~~~~~-~~~s~~~~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~---  308 (498)
T KOG0637|consen  233 LLLIETSESLWYPQE-KPLSPKGTTARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGR---  308 (498)
T ss_pred             hhheecccccccccc-cCCCCCcccccccccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcch---
Confidence            433333222221111 111111                     012 233333332   22222   2222222211   


Q ss_pred             EEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHH
Q psy11734        474 ITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHT  553 (817)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~  553 (817)
                        ++-+                    ||.+..+.  .+-...++-....-.|-..++.+..++.+....++.||+|.|+.
T Consensus       309 --~vy~--------------------GDp~a~~~--S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~  364 (498)
T KOG0637|consen  309 --EVYG--------------------GDPKADEN--SEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKR  364 (498)
T ss_pred             --HhhC--------------------CCCCCCcc--hhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceE
Confidence              1111                    11111110  00001122122223455567777888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccC--chhH-----HhhcCHhHHHHHHHHHHHHHHHHHHHhhH
Q psy11734        554 LGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLE--TPWA-----AILSSLPVWSLIISEVGHDYGFYLISSDL  626 (817)
Q Consensus       554 l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~--~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  626 (817)
                      +..+...+.+++.+.++.+  +.+....-|-..|+-.+..  .++.     ...+.|-..                -.+.
T Consensus       365 y~~~~~~f~~~~~~~gl~~--~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~----------------t~~~  426 (498)
T KOG0637|consen  365 YWGGVNAFGLATGLAGLVL--NTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAI----------------TFSI  426 (498)
T ss_pred             EeehhHHHHHHHHHHhhhh--hHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCcccc----------------cccc
Confidence            9999998999999999999  8888888888888544411  1110     111111100                1112


Q ss_pred             HHHHHH----HhCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q psy11734        627 PKYMSQ----VIGLS-VAENGVLSALPFLIMWLVSMSSSALADYLIVRDI  671 (817)
Q Consensus       627 p~~l~~----~~g~s-~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~  671 (817)
                      |.-+..    ..|.. ....+.+.....+.+++.++..|.+.|.+|.-+.
T Consensus       427 pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~  476 (498)
T KOG0637|consen  427 PFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNL  476 (498)
T ss_pred             ccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcch
Confidence            222211    01111 1234555556667888888888999999998764

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=97.90  E-value=1.5e-05  Score=65.66  Aligned_cols=79  Identities=19%  Similarity=0.142  Sum_probs=73.4

Q ss_pred             HhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchh
Q psy11734        464 LMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGI  543 (817)
Q Consensus       464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~  543 (817)
                      ...|..+.+.+|.|.+                                   |.++|.++.|++.+...+||.+|.+...+
T Consensus         5 GigRFayTplLP~M~~-----------------------------------~~~ls~~~ag~lasaNy~GYL~GAl~~~~   49 (85)
T PF06779_consen    5 GIGRFAYTPLLPLMQA-----------------------------------DGGLSLSQAGWLASANYLGYLVGALLASR   49 (85)
T ss_pred             hhHHHHHHhHhHHHHH-----------------------------------hcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4678889999999999                                   99999999999999999999999999999


Q ss_pred             hccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q psy11734        544 LSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSM  579 (817)
Q Consensus       544 l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l  579 (817)
                      +.++..+++.+..+++...+.++.+++.+  +.+..
T Consensus        50 ~~~~~~~~~~~~~~l~~~~~~~~~ma~~~--~~~~w   83 (85)
T PF06779_consen   50 LPRHSRPRRLLRAGLLLTVLSTAAMALTH--SFWLW   83 (85)
T ss_pred             HHhcccHHHHHHHHHHHHHHHHHHHHHHh--chHHH
Confidence            99999999999999999999999999998  76643

Note that many members are hypothetical proteins.

>KOG3762|consensus

Probab=97.65  E-value=0.00042  Score=76.05  Aligned_cols=157  Identities=20%  Similarity=0.119  Sum_probs=121.2

Q ss_pred             HHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhh
Q psy11734        198 AILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNV  277 (817)
Q Consensus       198 ~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~  277 (817)
                      .++.++.....++...+.+.+.-.+.+++=-++++ ++-.+..-|......-.+-++.-++.+++.+|+|+-++      
T Consensus       366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v------  438 (618)
T KOG3762|consen  366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNV------  438 (618)
T ss_pred             HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccce------
Confidence            56777877666666666555555555555444555 67777777877777778888889999999999999987      


Q ss_pred             HHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhh-hcccccc
Q psy11734        278 RKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC-VSGMVAP  355 (817)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~-lg~~~~~  355 (817)
                          +.+++.+.+.=+++..+.. ++|..+.+-.+-+...+.......++++.+.| +.++++.++....-. +|-..|.
T Consensus       439 ----~~lgLa~~~~Rf~~~S~L~-n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs  513 (618)
T KOG3762|consen  439 ----MYLGLACNVGRFLYYSYLQ-NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS  513 (618)
T ss_pred             ----eeehhhHHHHHHHHHHHhc-CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence                7788887777777776665 77888888888888888888888888888665 789999999887755 7888999


Q ss_pred             cccceeccccc
Q psy11734        356 LTVGFLTQNII  366 (817)
Q Consensus       356 ~i~g~l~~~~~  366 (817)
                      .|+|.+.++++
T Consensus       514 lIGG~~v~~fg  524 (618)
T KOG3762|consen  514 LIGGFVVERFG  524 (618)
T ss_pred             hhhhhhheeeh
Confidence            99998888763

>PF12832 MFS_1_like: MFS_1 like family

Probab=97.58  E-value=0.00042  Score=56.70  Aligned_cols=65  Identities=29%  Similarity=0.237  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q psy11734        606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDI  671 (817)
Q Consensus       606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~  671 (817)
                      +.+-..++++..+...+..++|.|+++ .|+|+.++|.+.++..+...++.++.|+++||.++++.
T Consensus         3 ~~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~   67 (77)
T PF12832_consen    3 LPLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV   67 (77)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence            345567788888999999999999998 79999999999999999999999999999999999864

>PF12832 MFS_1_like: MFS_1 like family

Probab=97.43  E-value=0.0004  Score=56.84  Aligned_cols=63  Identities=32%  Similarity=0.277  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCc
Q psy11734        208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDI  271 (817)
Q Consensus       208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~  271 (817)
                      .-..+++..++..++.-++|.|+++ .|+|+.++|.+.....+..+++.++.|.++||.++++.
T Consensus         5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~   67 (77)
T PF12832_consen    5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV   67 (77)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence            3445667777888888999999998 79999999999999999999999999999999999885

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=97.42  E-value=0.0006  Score=79.87  Aligned_cols=171  Identities=11%  Similarity=0.065  Sum_probs=123.6

Q ss_pred             HHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccchhhHHHHHHHHhHHHHHHHHhh
Q psy11734        218 GLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADF-FIARDILSRTNVRKVFATLGAVLPGVGALAA  296 (817)
Q Consensus       218 ~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (817)
                      ++|++...+..|+++..|++..++..+........-+...++|+++|+ +|+++.          +..+.++..++..++
T Consensus         2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~t----------Il~~~ii~~lG~~ll   71 (654)
T TIGR00926         2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKT----------ILYLSIVYVVGHALL   71 (654)
T ss_pred             ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH----------HHHHHHHHHHHHHHH
Confidence            467777888889888889999988888888888888899999999999 566664          666666666666665


Q ss_pred             hccCCC-------hhHHHHHHHHHHHHhhhccccccccccccCC-C---chhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        297 SYVGCN-------TSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-N---FSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       297 ~~~~~~-------~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~---~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      .....+       ....+..+.+..++.|..-+...+...|..+ +   ++-+.+.+.....++|+.+++.+.+.+.++.
T Consensus        72 ai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~  151 (654)
T TIGR00926        72 SFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV  151 (654)
T ss_pred             HhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            543211       1224455666667777777777777766443 2   4778889999999999999999888776543


Q ss_pred             cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734        366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG  436 (817)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~  436 (817)
                      +.++                                      ...+|...|.+.+++++++.+++....|.
T Consensus       152 ~~fg--------------------------------------~~~~~~~aF~i~~i~m~ia~lvf~~g~k~  184 (654)
T TIGR00926       152 GCFG--------------------------------------CQDCYPLAFGVPAILMILALIVFMAGSKM  184 (654)
T ss_pred             cccc--------------------------------------cCcchHHHHHHHHHHHHHHHHHHHHhccc
Confidence            2100                                      01269999999999999998887665443

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=97.32  E-value=0.0025  Score=70.49  Aligned_cols=149  Identities=11%  Similarity=0.089  Sum_probs=89.9

Q ss_pred             CchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcc
Q psy11734        193 KTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDIL  272 (817)
Q Consensus       193 ~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~  272 (817)
                      ..+|+.-+++|.+...+...++ ++...++-.....|+.. +|+++...|.+-....+.++.+.++..++.+|+|..|. 
T Consensus       249 ~~~w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl~~-~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~-  325 (432)
T PF06963_consen  249 IRGWRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYLKS-QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRA-  325 (432)
T ss_pred             hccHHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh-
Confidence            4457777888766554444443 34444455566777877 59999999999999999999999999999999998764 


Q ss_pred             cchhhHHHHHHHHhH---HHHHHHHhhhccCCCh--hHHHHHHHHHH-----HHhhhccccccccccccCCCchhHHHHH
Q psy11734        273 SRTNVRKVFATLGAV---LPGVGALAASYVGCNT--SMVAIFFTIGM-----AFMGFCYASIRVNPIDLSPNFSGTIMAL  342 (817)
Q Consensus       273 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~l~~-----~~~g~~~~~~~~~~~~~~p~~~g~a~g~  342 (817)
                               ...+..   .+........+.+.++  ......+..+.     +.-++=........+++++++||+.+|+
T Consensus       326 ---------G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gv  396 (432)
T PF06963_consen  326 ---------GLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGV  396 (432)
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHH
Confidence                     233322   1222222222332222  22222222111     2222222323333344666899999999


Q ss_pred             HHhhhhhcccc
Q psy11734        343 SNGLGCVSGMV  353 (817)
Q Consensus       343 ~~~~~~lg~~~  353 (817)
                      -+...++...+
T Consensus       397 q~sl~~lf~ll  407 (432)
T PF06963_consen  397 QNSLQSLFELL  407 (432)
T ss_pred             HHHHHHHHHHH
Confidence            99998865543

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=97.20  E-value=0.0053  Score=66.85  Aligned_cols=277  Identities=11%  Similarity=0.031  Sum_probs=155.8

Q ss_pred             chhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCc--chhHHHHhhhHHHHHhhhhheeccCCCCCC
Q psy11734         14 PALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASW--ANVFYIFGAIAVLWFAFWCILCFNDPKSHP   91 (817)
Q Consensus        14 ~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gW--r~~f~i~~~~~~i~~~~~~~~~~~~p~~~~   91 (817)
                      .+-.+++-...|+++-.|+.+..-+...+|-.++..+|-.+++ ..+.  +..+++. .....+..++.+++|..+++..
T Consensus       112 vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs-~~~~sy~~L~~is-l~~~~~a~~~~~fLP~~~~S~~  189 (412)
T PF01770_consen  112 VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS-FGGVSYFQLNYIS-LASVSLALLIALFLPMPKRSLF  189 (412)
T ss_pred             HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHH-HHHHHHHHHHHHHcCCCCcccc
Confidence            3445777778888999999999999999999999999998887 3333  3333333 3344455555566777654432


Q ss_pred             CCCHHHHhHhhhhc--cccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhh
Q psy11734         92 YISEKERKYLLDSI--GAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTP  169 (817)
Q Consensus        92 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (817)
                      ..+..+.+....+.  +..++.++.+.+-++...                        ..+                   
T Consensus       190 f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~-------------------  226 (412)
T PF01770_consen  190 FHRKPPAEQDANESESDKMNESPESSSSTEKSPS------------------------TES-------------------  226 (412)
T ss_pred             eeccCccccccccccccccccccccccccccCcc------------------------ccc-------------------
Confidence            22211110000000  000000000000000000                        000                   


Q ss_pred             cccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHh--hCCcccccchhhhh
Q psy11734        170 LVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEV--IGLSVAENGVLSAL  247 (817)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~ag~~~~~  247 (817)
                            .....++       ++....+++..+||.++.-.+-..+..++++-+.+|.....++.  .+-+..-.|.+-..
T Consensus       227 ------~~~~~~l-------~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~  293 (412)
T PF01770_consen  227 ------SSRKSVL-------RLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAA  293 (412)
T ss_pred             ------chHHHHH-------HHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHH
Confidence                  0000000       00122356777899988878888888889999999888888775  12233345666777


Q ss_pred             hHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccc-cc
Q psy11734        248 PFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASI-RV  326 (817)
Q Consensus       248 ~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~-~~  326 (817)
                      ..+.+.++++..|++..++.+..        ...+.....+.+..++++.+.. +.+...+...+......+..+.. .-
T Consensus       294 ~tllgA~~al~~g~v~~~w~~~~--------~l~l~~~S~l~a~~L~lm~~t~-~Iwv~Y~~yIif~~~y~fliTiA~~q  364 (412)
T PF01770_consen  294 STLLGAIAALLAGYVKVNWDRWG--------ELALGVFSLLQAGLLFLMSFTG-NIWVCYAGYIIFRSLYMFLITIASFQ  364 (412)
T ss_pred             HHHHHHHHHHHHhHhhcchHHHH--------HHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            77788888888888844443322        2223344444455555565554 55555555555555544444433 33


Q ss_pred             cccccCCCchhHHHHHHHhhhhhcccccccc
Q psy11734        327 NPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  357 (817)
Q Consensus       327 ~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i  357 (817)
                      .+.++..+.-|-.+|+++++..+-..+-..+
T Consensus       365 IA~~l~~e~yaLVFGiNtf~Al~LQtilT~i  395 (412)
T PF01770_consen  365 IAKNLSEERYALVFGINTFVALVLQTILTLI  395 (412)
T ss_pred             HHHhccccceeeeeeeHHHHHHHHHHheEEE
Confidence            4455666788999999998888666555444

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=96.75  E-value=1.4  Score=49.57  Aligned_cols=256  Identities=12%  Similarity=0.036  Sum_probs=132.5

Q ss_pred             ChhhHHHHHHHHHHHHHHh-hhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh--hcchHH--HHHHHHHHhhhcccC
Q psy11734        519 DERTQGVILSAFYYGYILT-HIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA--HSGPVS--MTVLRFLEGVGEDLE  593 (817)
Q Consensus       519 s~~~~g~~~s~~~~~~~i~-~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~--~~s~~~--l~~~R~l~Gig~~~~  593 (817)
                      +.....++-+...+..++. .++.+++++|++|++++-.....+...-++.++.-  ..+..+  -..-......    .
T Consensus        41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~----~  116 (472)
T TIGR00769        41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLL----P  116 (472)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhc----c
Confidence            4467888888776666666 99999999999999999998888888888887762  001100  0000000000    0


Q ss_pred             chhHHhhcCHhHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy11734        594 TPWAAILSSLPVWSLIISEVG-HDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDIL  672 (817)
Q Consensus       594 ~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~  672 (817)
                      ..++..+.--+.|...+.+.. -.++...++...=.+++|.  .+.+|+.-++.+.++++-+|.+++|.+...+.+.+--
T Consensus       117 ~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi--~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~  194 (472)
T TIGR00769       117 PGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQI--TTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRAS  194 (472)
T ss_pred             hhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            001100000012222222211 1122222221222345553  7889999999999999999999999888776531100


Q ss_pred             ccchhhH------HHHHHHHHHHHHHHHHHHhh---------------------------------cCchHHHHHHHHH-
Q psy11734        673 SRTNVRK------VFATLGAVLPGVGALAASYV---------------------------------GCNTSMVAICFTI-  712 (817)
Q Consensus       673 ~~~~~r~------~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~-  712 (817)
                      .......      .++.+..+...+.+.+..+.                                 ..++....+...+ 
T Consensus       195 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi  274 (472)
T TIGR00769       195 LGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLKFLVSSPYILDLALLVI  274 (472)
T ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhccccCCCCCCHHHHHHHHHhCHHHHHHHHHHH
Confidence            0000011      12223232223333222221                                 0011111111111 


Q ss_pred             -HHHHHhhhhhhhhhhccccCC--CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHH
Q psy11734        713 -GMAFMGFCYASIRVNPIDLSP--NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFI  783 (817)
Q Consensus       713 -~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i  783 (817)
                       .+.........--....+.+|  ++++.-+|-.+...++...+...+.+.+.+..|   |.....+.-.+.++
T Consensus       275 ~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~G---w~~~a~i~Pii~li  345 (472)
T TIGR00769       275 AYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYG---WLTAALITPLVMLL  345 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHH
Confidence             112222222222244455655  568888888888877777666666688888876   76655554444444

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>KOG1237|consensus

Probab=96.69  E-value=0.22  Score=57.53  Aligned_cols=176  Identities=11%  Similarity=0.040  Sum_probs=104.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH-hhcCcccchhhHHHHHH
Q psy11734        205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF-IARDILSRTNVRKVFAT  283 (817)
Q Consensus       205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-g~r~~~~~~~~~~~~~~  283 (817)
                      .........+-...+++...-+-.|+.+.++.+...+.-......-........+++++|.+ ||.+.          +.
T Consensus        39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~t----------I~  108 (571)
T KOG1237|consen   39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFT----------IN  108 (571)
T ss_pred             HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHH----------HH
Confidence            33455555566777777766677788888888887777777777777778889999999995 55553          56


Q ss_pred             HHhHHHHHHHHhhhccC--------------C----C----hhHHHHHHHHH--HHHhhhccccccccccccCC----C-
Q psy11734        284 LGAVLPGVGALAASYVG--------------C----N----TSMVAIFFTIG--MAFMGFCYASIRVNPIDLSP----N-  334 (817)
Q Consensus       284 ~~~~~~~~~~~~~~~~~--------------~----~----~~~~~~~~~l~--~~~~g~~~~~~~~~~~~~~p----~-  334 (817)
                      ++..+...++..+....              .    +    .........+.  ..+.+..-+.......|-.+    + 
T Consensus       109 ~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~  188 (571)
T KOG1237|consen  109 IGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVE  188 (571)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcch
Confidence            66665555543332210              0    0    01111111111  22333444444444444222    1 


Q ss_pred             --chhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchh
Q psy11734        335 --FSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEW  412 (817)
Q Consensus       335 --~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (817)
                        ....-+....+..+.|..++..+..++-|+                                             .+|
T Consensus       189 ~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~---------------------------------------------~~w  223 (571)
T KOG1237|consen  189 VKGIPSFFNWFYFSQNGGALLAQTVLVYIQDN---------------------------------------------VGW  223 (571)
T ss_pred             hhCcccchhHHHHHHHHHHHHHHHHHHhhhhc---------------------------------------------ccc
Confidence              233556666666666666665555544443                                             268


Q ss_pred             HHHHHHHHHHHHHhhhhheeecc
Q psy11734        413 RVVFWIMFLALVISNVFFVLFGS  435 (817)
Q Consensus       413 ~~~f~i~~~~~~~~~~~~~~~~~  435 (817)
                      ...|-+..+.+.++.++++.-.+
T Consensus       224 ~lgf~i~~~~~~lai~iF~~g~~  246 (571)
T KOG1237|consen  224 KLGFGIPTVLNALAILIFLPGFP  246 (571)
T ss_pred             eeeccHHHHHHHHHHHHHHcCce
Confidence            88888888888888877766543

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=96.68  E-value=0.0081  Score=60.51  Aligned_cols=57  Identities=14%  Similarity=0.332  Sum_probs=40.4

Q ss_pred             CCCcchhHHHhHhhhhhhHHHHhhhhhhh---cc-cccCcchhHHHHhhhHHHHHhhhhhe
Q psy11734         26 PNERSFMTALVFAGVQLGSVLATFCSGLI---MS-FTASWANVFYIFGAIAVLWFAFWCIL   82 (817)
Q Consensus        26 ~~~rg~~~gi~~~~~~~G~~ig~~~~~~l---~~-~~~gWr~~f~i~~~~~~i~~~~~~~~   82 (817)
                      .|+|+....+...+.++|+++....--.-   .+ ....|++++-+.+.+.++.+++..++
T Consensus         1 ~k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if   61 (267)
T PF07672_consen    1 QKKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF   61 (267)
T ss_pred             CCccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            47788888888889999988776552211   11 23469999999998877776666555

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=96.66  E-value=0.14  Score=57.62  Aligned_cols=146  Identities=8%  Similarity=0.059  Sum_probs=93.1

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCC-----ChhHHHHHHHHHHHHHHHH-HHHHHHHHhhhhcccccccch
Q psy11734        603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGL-----SVAENGVLSALPFLIMWLV-SMSSSALADYLIVRDILSRTN  676 (817)
Q Consensus       603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~-----s~~~~~~~~~~~~~~~~ig-~~~~g~l~dr~g~~~~~~~~~  676 (817)
                      |+++...+..++....++.+     --++|....     +.+...++.....+.+.+. .++.+++++|+.|++.+.   
T Consensus         7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~---   78 (472)
T TIGR00769         7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFY---   78 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHH---
Confidence            45556666666655555433     334555544     3466777777776776666 899999999999987642   


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhh-----cC-------------------------chHHHHHHHHHHHHHHhhhhh-hhh
Q psy11734        677 VRKVFATLGAVLPGVGALAASYV-----GC-------------------------NTSMVAICFTIGMAFMGFCYA-SIR  725 (817)
Q Consensus       677 ~r~~~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~~~~~~~~~~~~~~~~~-~~~  725 (817)
                           .+...+.  ..++++.+.     +.                         +.|.........-.......+ ..|
T Consensus        79 -----~~~~~F~--~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW  151 (472)
T TIGR00769        79 -----TVISPFL--GFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFW  151 (472)
T ss_pred             -----HHHHHHH--HHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence                 1111111  111111111     10                         123333444445555555565 777


Q ss_pred             hhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734        726 VNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  763 (817)
Q Consensus       726 ~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~  763 (817)
                      ..+.|+.. ++..+-.++.+..+++|..+++.+..++.+
T Consensus       152 ~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~  190 (472)
T TIGR00769       152 GFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK  190 (472)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998 889999999999999999999999888763

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=96.43  E-value=0.13  Score=53.80  Aligned_cols=154  Identities=23%  Similarity=0.241  Sum_probs=96.7

Q ss_pred             HHHHHHhhHHHHHHHHhCCCh--hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHH
Q psy11734        618 GFYLISSDLPKYMSQVIGLSV--AENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA  695 (817)
Q Consensus       618 ~~~~~~~~~p~~l~~~~g~s~--~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~  695 (817)
                      .........+.+..+ .+.+.  ...+.......+...++.+..|.++||.|||+.+          ..+......+.+.
T Consensus        17 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~~~~~~   85 (338)
T COG0477          17 DLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL----------IIGLLLFLLGTLL   85 (338)
T ss_pred             hcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH----------HHHHHHHHHHHHH
Confidence            333334455655555 34444  4678888888899999999999999999877432          2222222233333


Q ss_pred             HHhhcC-chHHHHHHHHHHHHHHhhhhhhhhhhccccCCC--chHHHHHHHHH-HHHHHHhHHHHHHHHhhcCCccccHH
Q psy11734        696 ASYVGC-NTSMVAICFTIGMAFMGFCYASIRVNPIDLSPN--FSGTIMALSNG-LGCVSGMVAPLTVGFLTQNKTLLEWR  771 (817)
Q Consensus       696 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~-~~~~g~~i~p~~~g~~~~~~g~~~~~  771 (817)
                      ..+... ..+.........+...+...+.......+..|+  .++...+.... ...++..++|.+.+.+.+. ....|+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  164 (338)
T COG0477          86 LALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLWGWR  164 (338)
T ss_pred             HHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchH
Confidence            333332 233333333334555555666667778888885  78999898888 5777888898887777766 334587


Q ss_pred             HHHHHHHHHHHH
Q psy11734        772 VVFWIMFLTLFI  783 (817)
Q Consensus       772 ~~~~~~~~~~~i  783 (817)
                      ..+.........
T Consensus       165 ~~~~~~~~~~~~  176 (338)
T COG0477         165 AAFLLAALLGLL  176 (338)
T ss_pred             HHHHHHHHHHHH
Confidence            755555555443

>KOG3810|consensus

Probab=96.43  E-value=0.0085  Score=62.41  Aligned_cols=309  Identities=9%  Similarity=0.022  Sum_probs=172.9

Q ss_pred             hhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHh--hhHHHHHhhhhheeccCCCCCCCC
Q psy11734         16 LCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFG--AIAVLWFAFWCILCFNDPKSHPYI   93 (817)
Q Consensus        16 ~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~--~~~~i~~~~~~~~~~~~p~~~~~~   93 (817)
                      -++++-...+|+++.++.|..-+..-.|-..|..++-.+++  .+|-.-+..+-  .....+..+...++|..+++....
T Consensus       115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs--~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~  192 (433)
T KOG3810|consen  115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVS--LETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFH  192 (433)
T ss_pred             hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhh--hcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhh
Confidence            35667777889999999999999999999999999998887  44444444432  233344445555666554332211


Q ss_pred             CHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhhcccC
Q psy11734         94 SEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAH  173 (817)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (817)
                      +.+++.. ..+.++..       ++.+.....                                                
T Consensus       193 ~~~~~~~-v~~~e~~~-------~~~~~~~~l------------------------------------------------  216 (433)
T KOG3810|consen  193 RLEDKIS-VGDLEEMN-------PQASYMSYL------------------------------------------------  216 (433)
T ss_pred             cccccce-eccchhcC-------ccchhhHHH------------------------------------------------
Confidence            1111111 01111100       010000000                                                


Q ss_pred             cCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCc-ccccchhhhhhHHHH
Q psy11734        174 SGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLS-VAENGVLSALPFLIM  252 (817)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s-~~~ag~~~~~~~i~~  252 (817)
                               +   ..-......+.+..+||.+..=.+-..+..+++|-+.+|......+...-+ ..--|..=....+.+
T Consensus       217 ---------~---~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLG  284 (433)
T KOG3810|consen  217 ---------R---GAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLG  284 (433)
T ss_pred             ---------H---HHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHH
Confidence                     0   000001223556778888766666667778899999998888877753111 112344444556677


Q ss_pred             HHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccc-ccccccc
Q psy11734        253 WLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASI-RVNPIDL  331 (817)
Q Consensus       253 ~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~  331 (817)
                      +++.+..|.+.-.+.|.        +..++.++.+..+-.++.+..+. +.++..+...+.....+...+.. ...+.++
T Consensus       285 a~~~~~~g~l~i~w~r~--------g~~ll~~~s~~~agllf~m~~t~-~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL  355 (433)
T KOG3810|consen  285 AIAALAAGYLNINWNRW--------GDLLLAVGSAVQAGLLFIMAQTQ-HIWVCYAGYVLFRVIYQLTITIATFQIARNL  355 (433)
T ss_pred             HHHHHHHHheeeccchh--------hHHHHHHHHHHhhhhhhhhhccc-ceehhhhhHHHHHhhHhhhhhHHHHHHHHhh
Confidence            77888888877544433        23346666555555555555554 45555555554444444443333 4455667


Q ss_pred             CCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccch
Q psy11734        332 SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSE  411 (817)
Q Consensus       332 ~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (817)
                      ..|.-|-.+|++.++.-+-..+-..+   ..|..|-    .+++.                            +  .-.-
T Consensus       356 ~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~----~L~ir----------------------------~--Q~~~  398 (433)
T KOG3810|consen  356 SSELFGLVFGINTFVALILQSILTLI---VVDDRGL----GLDIR----------------------------T--QFVV  398 (433)
T ss_pred             hhhhheeeeehHHHHHHHHHHhheEE---EEccccc----CCCcc----------------------------e--eEEE
Confidence            77888999999988877555544333   3454431    00000                            0  0123


Q ss_pred             hHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734        412 WRVVFWIMFLALVISNVFFVLFGSGEVQY  440 (817)
Q Consensus       412 ~~~~f~i~~~~~~~~~~~~~~~~~~~~~~  440 (817)
                      |..-|.+.+++.+++..+....+++.+.+
T Consensus       399 Y~~Yf~v~~~i~~~~~~~~~~~~~~~~~~  427 (433)
T KOG3810|consen  399 YSSYFIVLGVIFLIGFGIEYLMCRRNKVP  427 (433)
T ss_pred             EeehHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence            66678888888888877666555544433

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=96.17  E-value=0.81  Score=50.77  Aligned_cols=162  Identities=19%  Similarity=0.123  Sum_probs=86.4

Q ss_pred             hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc-c-c
Q psy11734        596 WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDI-L-S  673 (817)
Q Consensus       596 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~-~-~  673 (817)
                      +.+++|-|.+..+.+.....-.++..--.-...=+.+ .|++.++.+.+.    +..+.-.++.|+++.|+-+.+- + .
T Consensus       271 l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~----li~~P~qii~~~~~~Kws~g~~P~~~  345 (544)
T PF13000_consen  271 LWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLV----LIDFPFQIILPYYIGKWSAGSPPLDV  345 (544)
T ss_pred             HHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHH----HHhhhHHHHHHHHhhhhhcCCCcccc
Confidence            4577888888888777777776666655555555556 699998887655    4444445555555555433221 0 0


Q ss_pred             ----cch-----------------hhHHHHHHHHHHHH----HHHHHHHhhc-Cc--hHHHHHHHHHHHHHHhhhhhhhh
Q psy11734        674 ----RTN-----------------VRKVFATLGAVLPG----VGALAASYVG-CN--TSMVAICFTIGMAFMGFCYASIR  725 (817)
Q Consensus       674 ----~~~-----------------~r~~~~~~~~~~~~----~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~  725 (817)
                          .++                 .|.|.  .++..-.    +........+ .+  +.......+.......+.....+
T Consensus       346 ~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl--~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmF  423 (544)
T PF13000_consen  346 DNKALPNFSRANKIIRLLVGDAGALRPWL--WAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMF  423 (544)
T ss_pred             ccccccccccccchhhhhhccchhhHHHH--HHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence                000                 01111  1221111    1111111222 11  12222222333333333222222


Q ss_pred             ----hhccccC-CCchHHHHHHHHHHHHHHHhHHHHHHHHhhcC
Q psy11734        726 ----VNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  764 (817)
Q Consensus       726 ----~~~~~~~-~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~  764 (817)
                          +.-+.+. |..=||.|-+.|++.++|+-.-..+.=++.|.
T Consensus       424 Vai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~  467 (544)
T PF13000_consen  424 VAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY  467 (544)
T ss_pred             HHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence                3333443 68899999999999999998888777777775

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>KOG3098|consensus

Probab=96.13  E-value=0.088  Score=58.50  Aligned_cols=155  Identities=14%  Similarity=-0.070  Sum_probs=88.7

Q ss_pred             HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHh--hCCcc-cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcc
Q psy11734        196 WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEV--IGLSV-AENGVLSALPFLIMWLVSMSSSALADFFIARDIL  272 (817)
Q Consensus       196 ~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~--~g~s~-~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~  272 (817)
                      ..+++++|+.......++..+...--.....|..+.-.  ++.+. ...+......+++..+++...+.+.+|..+... 
T Consensus       233 ~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~-  311 (461)
T KOG3098|consen  233 TFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGR-  311 (461)
T ss_pred             HHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhccc-
Confidence            34677888887777777766555555556666655432  23322 234555666778888888888888887655432 


Q ss_pred             cchhhHHHHHHHHhHHHHHHHHhhhcc-CCC----------------hhHHHHHHHHHHHHhhhccccccccccccCCCc
Q psy11734        273 SRTNVRKVFATLGAVLPGVGALAASYV-GCN----------------TSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNF  335 (817)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------------~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~  335 (817)
                            +..+.++..+..+..++.... +.+                .....+.-.+.+..-....+........+.|++
T Consensus       312 ------~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~  385 (461)
T KOG3098|consen  312 ------KPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDD  385 (461)
T ss_pred             ------CcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc
Confidence                  222455554444443333221 111                112222222222222233333477778888999


Q ss_pred             hhHHHHHHHhhhhhcccccccc
Q psy11734        336 SGTIMALSNGLGCVSGMVAPLT  357 (817)
Q Consensus       336 ~g~a~g~~~~~~~lg~~~~~~i  357 (817)
                      |.++.++.-+-+.++++++-..
T Consensus       386 ~~~~fsi~kfyq~~~s~v~~f~  407 (461)
T KOG3098|consen  386 RAQAFSLFKFYQSVASCVAFFF  407 (461)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhh
Confidence            9999998888888776654443

>PRK03612 spermidine synthase; Provisional

Probab=96.03  E-value=0.46  Score=54.60  Aligned_cols=152  Identities=13%  Similarity=-0.003  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHH
Q psy11734        608 LIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAV  687 (817)
Q Consensus       608 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~  687 (817)
                      +.+..++..++...+......++...+|-+....+.+.+.+.++..+|..+++++.++.-++..      + +-+.++.+
T Consensus        19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~------~-~e~~i~l~   91 (521)
T PRK03612         19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV------A-VELLLALL   91 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH------H-HHHHHHHH
Confidence            3344444455555555556666666678888888888888889999999888877643322211      0 00011111


Q ss_pred             HHHHHHHHHHhhcC--c-hHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhc-
Q psy11734        688 LPGVGALAASYVGC--N-TSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ-  763 (817)
Q Consensus       688 ~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~-  763 (817)
                      ......++......  . ........++..++.|+..|.......+...++.+...|-......+|+.+|+.+.+.+.- 
T Consensus        92 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp  171 (521)
T PRK03612         92 GGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLP  171 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHH
Confidence            11111111111110  1 1112223333455556666655544443333345677777788888899999888886654 


Q ss_pred             CCc
Q psy11734        764 NKT  766 (817)
Q Consensus       764 ~~g  766 (817)
                      ..|
T Consensus       172 ~lG  174 (521)
T PRK03612        172 RLG  174 (521)
T ss_pred             hcc
Confidence            444

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=96.00  E-value=0.013  Score=61.46  Aligned_cols=75  Identities=29%  Similarity=0.546  Sum_probs=65.4

Q ss_pred             cccCCh--hhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcc--hHHHHHHHHHHhhhc
Q psy11734        515 KFDWDE--RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSG--PVSMTVLRFLEGVGE  590 (817)
Q Consensus       515 ~~~~s~--~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s--~~~l~~~R~l~Gig~  590 (817)
                      +++.+.  .+.++..+.+.++..+++++.|.+.||+|||+.+..+.....++.+++.+..  +  .+.+++.|+.+|++.
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~  108 (338)
T COG0477          31 TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP--NVGLALLLILRLLQGLGG  108 (338)
T ss_pred             HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc--cchHHHHHHHHHHHHhhh
Confidence            454444  5889999999999999999999999999999999888887777778888887  5  889999999999998


Q ss_pred             c
Q psy11734        591 D  591 (817)
Q Consensus       591 ~  591 (817)
                      +
T Consensus       109 ~  109 (338)
T COG0477         109 G  109 (338)
T ss_pred             H
Confidence            7

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=95.70  E-value=0.022  Score=47.19  Aligned_cols=77  Identities=19%  Similarity=0.237  Sum_probs=63.7

Q ss_pred             HHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH
Q psy11734        215 HDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL  294 (817)
Q Consensus       215 ~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~  294 (817)
                      .+.+-+.+...+|...+| .++|..++|++.+...++.++|.+...++.++..+++.          ...+.+..++.+.
T Consensus         4 mGigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~----------~~~~l~~~~~~~~   72 (85)
T PF06779_consen    4 MGIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRL----------LRAGLLLTVLSTA   72 (85)
T ss_pred             hhhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH----------HHHHHHHHHHHHH
Confidence            355667777888877777 69999999999999999999999999999998666664          7788888888888


Q ss_pred             hhhccCCC
Q psy11734        295 AASYVGCN  302 (817)
Q Consensus       295 ~~~~~~~~  302 (817)
                      .+.++++.
T Consensus        73 ~ma~~~~~   80 (85)
T PF06779_consen   73 AMALTHSF   80 (85)
T ss_pred             HHHHHhch
Confidence            88777643

Note that many members are hypothetical proteins.

>KOG3574|consensus

Probab=95.66  E-value=1.3  Score=47.38  Aligned_cols=163  Identities=16%  Similarity=0.081  Sum_probs=89.8

Q ss_pred             hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy11734        596 WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRT  675 (817)
Q Consensus       596 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~  675 (817)
                      ++++++-|.+..+.......-.++.+-....+.-+.| .|++.++-+.+.....-.+++.....|.++.+  +|+..  +
T Consensus       258 l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~--~  332 (510)
T KOG3574|consen  258 LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLN--V  332 (510)
T ss_pred             HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcch--H
Confidence            4677777887777777777777888777777877777 69999888766533333444444444444331  22221  1


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhc---C--c--hHHHHHHHHHHHHHHh----hhhhhhhhhccccCC-CchHHHHHHH
Q psy11734        676 NVRKVFATLGAVLPGVGALAASYVG---C--N--TSMVAICFTIGMAFMG----FCYASIRVNPIDLSP-NFSGTIMALS  743 (817)
Q Consensus       676 ~~r~~~~~~~~~~~~~~~~~~~~~~---~--~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~g~~~g~~  743 (817)
                      ..|....-+....  +..++..+.+   .  +  +....++.+....+.+    ..+-...+..+++.+ +.-||-+.+.
T Consensus       333 ~lka~~~R~~~~~--~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlL  410 (510)
T KOG3574|consen  333 FLKAVPYRLGGGL--VQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLL  410 (510)
T ss_pred             HHHhhhHHHHHHH--HHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHH
Confidence            2222221122211  1222222211   1  1  1111112121222221    122222244455554 7799999999


Q ss_pred             HHHHHHHHhHHHHHHHHhhcCC
Q psy11734        744 NGLGCVSGMVAPLTVGFLTQNK  765 (817)
Q Consensus       744 ~~~~~~g~~i~p~~~g~~~~~~  765 (817)
                      |+..++|+-.=..+...+.|..
T Consensus       411 NTLsnLGg~wp~tv~l~l~D~l  432 (510)
T KOG3574|consen  411 NTLSNLGGNWPGTVALWLADGL  432 (510)
T ss_pred             HHHHHhcCCcHHHHHHHhcccC
Confidence            9999999988888888888854

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=95.16  E-value=3.1  Score=45.70  Aligned_cols=67  Identities=12%  Similarity=0.013  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734        523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED  591 (817)
Q Consensus       523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~  591 (817)
                      .+.+.-+-.+-..+..+...++.+|+.-+.=..+..++..++.++.++++  +.+.=+++=.+.+++.|
T Consensus        61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~--~v~~~l~Gv~las~ssg  127 (402)
T PF02487_consen   61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP--SVWVRLLGVVLASLSSG  127 (402)
T ss_pred             chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc--chhHHHHHHHHHhhhhh
Confidence            44455555556666777788888988766666677778888889999998  88887777777777777

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=94.72  E-value=0.11  Score=56.76  Aligned_cols=74  Identities=7%  Similarity=0.064  Sum_probs=47.7

Q ss_pred             cCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCc--chhHHHHhhhHHHHHhhhhhee
Q psy11734          6 NFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASW--ANVFYIFGAIAVLWFAFWCILC   83 (817)
Q Consensus         6 G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gW--r~~f~i~~~~~~i~~~~~~~~~   83 (817)
                      +++.|..-..-..+ +..|++    ..++-|+++.+.++++|+..=-.+.+  .||  |..+.+..++.++..+..++.+
T Consensus       123 s~ssg~GE~tfL~l-t~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~--~g~s~~~tll~~~~lp~~~~~~~f~~L  195 (402)
T PF02487_consen  123 SLSSGLGEVTFLSL-THFYGK----SSLSAWSSGTGGAGLVGALYYLGLTT--LGLSPRTTLLIMLVLPAIFLLSYFFLL  195 (402)
T ss_pred             hhhhhhhHHHHHHH-HHhcCc----cccccccCCcChhhHHHHHHHHHHHH--hCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            33334333333333 456653    46788999999999988887665554  455  7788888877766666666666


Q ss_pred             ccC
Q psy11734         84 FND   86 (817)
Q Consensus        84 ~~~   86 (817)
                      |++
T Consensus       196 ~~~  198 (402)
T PF02487_consen  196 PSP  198 (402)
T ss_pred             ccc
Confidence            654

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PRK03612 spermidine synthase; Provisional

Probab=94.66  E-value=0.24  Score=56.79  Aligned_cols=148  Identities=14%  Similarity=0.038  Sum_probs=86.3

Q ss_pred             HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhH
Q psy11734        208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAV  287 (817)
Q Consensus       208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~  287 (817)
                      ..+..++.+.+-...-.....++....|-+....+.+...+..+..+|+.+++++.++..++..      +.. +.++..
T Consensus        19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~------~~e-~~i~l~   91 (521)
T PRK03612         19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV------AVE-LLLALL   91 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH------HHH-HHHHHH
Confidence            3444455566666666666667777789999999999999999999999999988744333321      000 111111


Q ss_pred             HHHHH---HHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceec
Q psy11734        288 LPGVG---ALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLT  362 (817)
Q Consensus       288 ~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~  362 (817)
                      .....   .....+...........+.+..++.|+..|...-...+...++.+...|-.+....+|+++|..+.+.+.
T Consensus        92 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vL  169 (521)
T PRK03612         92 GGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLL  169 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence            11110   0111111001111222233344566666666544444433445677788888899999999999888765

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=94.53  E-value=1.4  Score=41.57  Aligned_cols=140  Identities=11%  Similarity=-0.075  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHhC-----CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHH
Q psy11734        612 EVGHDYGFYLISSDLPKYMSQVIG-----LSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGA  686 (817)
Q Consensus       612 ~~~~~~~~~~~~~~~p~~l~~~~g-----~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~  686 (817)
                      .++...++........+.++....     .++..--.-.++......+++++.+.+.+++|.|..          ++++.
T Consensus         5 f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~s----------m~lg~   74 (156)
T PF05978_consen    5 FMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWS----------MILGS   74 (156)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHH----------HHHHH
Confidence            344444455444444555543211     222222234456667778888899999999997743          34555


Q ss_pred             HHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734        687 VLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  763 (817)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~  763 (817)
                      +...+..+...+  ++.+..+..-.+.+++.+......-....+... +.+++-.|+.-.+.+.+..+|..+.-.+.+
T Consensus        75 ~~y~~y~~~~~~--~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~  150 (156)
T PF05978_consen   75 LGYAIYIASFFY--PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ  150 (156)
T ss_pred             HHHHHHHHHHHh--hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            555443333322  245556666666666666666555555666555 678888888888888877777776555443

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>KOG3810|consensus

Probab=93.81  E-value=0.7  Score=48.66  Aligned_cols=266  Identities=12%  Similarity=0.121  Sum_probs=160.4

Q ss_pred             cccCChhhHH-HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--
Q psy11734        515 KFDWDERTQG-VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--  591 (817)
Q Consensus       515 ~~~~s~~~~g-~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--  591 (817)
                      +.|+++.|.. =+.-.....|.+.-.+.=.+.|..--|++++.--+.......+.-+.+  +.+.+=+.-+.-|...+  
T Consensus        35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~--sV~~mQvlE~FyG~~tAaE  112 (433)
T KOG3810|consen   35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGP--SVKAMQVLEFFYGPATAAE  112 (433)
T ss_pred             CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcC--CchheeeehhhcChHHHHH
Confidence            3344444332 233345566777777788889988889988877777777777777777  88777777777777766  


Q ss_pred             --------------------------------------------------------------------------------
Q psy11734        592 --------------------------------------------------------------------------------  591 (817)
Q Consensus       592 --------------------------------------------------------------------------------  591 (817)
                                                                                                      
T Consensus       113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~  192 (433)
T KOG3810|consen  113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFH  192 (433)
T ss_pred             HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhh
Confidence                                                                                            


Q ss_pred             ---------------cCc---------------hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhC-CChhH
Q psy11734        592 ---------------LET---------------PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIG-LSVAE  640 (817)
Q Consensus       592 ---------------~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g-~s~~~  640 (817)
                                     .+.               .+.+..++|++..=.+=+.+..++++-+..+....-++... -...-
T Consensus       193 ~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vy  272 (433)
T KOG3810|consen  193 RLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVY  272 (433)
T ss_pred             cccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhh
Confidence                           000               11233456665333333445555666666666665555421 11112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhh
Q psy11734        641 NGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFC  720 (817)
Q Consensus       641 ~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  720 (817)
                      -|..=++..+.++++.+..|++.-++.|.        +...+..+....+.+++.+.... +.|...+...+......+.
T Consensus       273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~--------g~~ll~~~s~~~agllf~m~~t~-~Iw~~Ya~yvlfr~~y~l~  343 (433)
T KOG3810|consen  273 NGAVEAVSTLLGAIAALAAGYLNINWNRW--------GDLLLAVGSAVQAGLLFIMAQTQ-HIWVCYAGYVLFRVIYQLT  343 (433)
T ss_pred             cCHHHHHHHHHHHHHHHHHHheeeccchh--------hHHHHHHHHHHhhhhhhhhhccc-ceehhhhhHHHHHhhHhhh
Confidence            23344456677788888888887655544        33455566555555555555544 6777777777776666655


Q ss_pred             hhhhh-hhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCcc--------ccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        721 YASIR-VNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTL--------LEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       721 ~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~--------~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      ..... ..+.+...+.-|...|+..++.-+-..+-..+   ..|..|-        .-|...|.+.+.+.+++....+..
T Consensus       344 itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~  420 (433)
T KOG3810|consen  344 ITIATFQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM  420 (433)
T ss_pred             hhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence            54443 44555666888999999877765554444333   4443221        124567888888888887665544


Q ss_pred             ccC
Q psy11734        792 GSG  794 (817)
Q Consensus       792 ~~~  794 (817)
                      .++
T Consensus       421 ~~~  423 (433)
T KOG3810|consen  421 CRR  423 (433)
T ss_pred             hhc
Confidence            333

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=92.84  E-value=0.89  Score=50.02  Aligned_cols=110  Identities=14%  Similarity=0.097  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHHHHhh--cCch------HHHHHHHHHHHHHHhhhhhhhhhhccccCC----CchHHHHHHHHHHHHHH
Q psy11734        683 TLGAVLPGVGALAASYV--GCNT------SMVAICFTIGMAFMGFCYASIRVNPIDLSP----NFSGTIMALSNGLGCVS  750 (817)
Q Consensus       683 ~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~g~~~~~~~~g  750 (817)
                      +++.++..++.+++...  +...      ....+.+.+...+.|..-+.......|.++    +++..........-++|
T Consensus         5 ~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G   84 (372)
T PF00854_consen    5 LLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIG   84 (372)
T ss_dssp             HHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhh
Confidence            46666666666663332  2121      345555555666666667777777777665    23777888889999999


Q ss_pred             HhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734        751 GMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGE  795 (817)
Q Consensus       751 ~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  795 (817)
                      +.+++.+.+++.++.+   |...|.+.++..+++.+.++.-++..
T Consensus        85 ~~~~~~~~~~i~~~~~---~~~~f~i~~~~~~~~~~~f~~~~~~y  126 (372)
T PF00854_consen   85 SLFSPTLVPYIQQNYG---WFLGFGIPAIGMLLALIVFLSGRKRY  126 (372)
T ss_dssp             HHHHHHCCCHHHHCS----HHHHHHHHHHHHHHHHHHHHCCCCTT
T ss_pred             hHhhcccchhhccccc---hhhhhhHHHHHHHHHHHHHHhCCcCC
Confidence            9999999999998876   99999999999999888877664443

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG0637|consensus

Probab=92.22  E-value=0.24  Score=54.13  Aligned_cols=151  Identities=18%  Similarity=0.161  Sum_probs=103.0

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHH
Q psy11734        603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFA  682 (817)
Q Consensus       603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~  682 (817)
                      ++........+...++.-.-.+++|+|++. +|.+.+..+..-...-+.+++.+++.|..+||...|..     +||.++
T Consensus        32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~G-----RRRPfI  105 (498)
T KOG0637|consen   32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYG-----RRRPFI  105 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccc-----cccchH
Confidence            345555566667777777778999999999 69999988888888889999999999999998765532     256677


Q ss_pred             HHHHHHHHHHHHHHHhhcC-------ch-----HHHHHHHHHHHHHH----hhhhhhhhhhccccCC-CchHH-HHHHHH
Q psy11734        683 TLGAVLPGVGALAASYVGC-------NT-----SMVAICFTIGMAFM----GFCYASIRVNPIDLSP-NFSGT-IMALSN  744 (817)
Q Consensus       683 ~~~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~g~-~~g~~~  744 (817)
                      ..+.....+.++++.+.++       +.     ...+..+++.....    .....+.-+...|... +++-+ +++...
T Consensus       106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~  185 (498)
T KOG0637|consen  106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS  185 (498)
T ss_pred             HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence            7777777777777766421       11     23333333333322    2344445567777765 45555 888888


Q ss_pred             HHHHHHHhHHHHHHH
Q psy11734        745 GLGCVSGMVAPLTVG  759 (817)
Q Consensus       745 ~~~~~g~~i~p~~~g  759 (817)
                      .+..+|+.+|=...+
T Consensus       186 ~f~avGnvLGY~~g~  200 (498)
T KOG0637|consen  186 FFMAVGNVLGYALGS  200 (498)
T ss_pred             HHHHhcceeeeeccc
Confidence            888888877654444

>KOG3574|consensus

Probab=91.74  E-value=1.6  Score=46.71  Aligned_cols=166  Identities=14%  Similarity=0.063  Sum_probs=99.3

Q ss_pred             HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccch
Q psy11734        196 WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRT  275 (817)
Q Consensus       196 ~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~  275 (817)
                      .+++++-|++..........-.++-+--...+.-+.| +|++.++-++...+....+++.....|+++.+.  |+.  .+
T Consensus       258 l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~--~pl--~~  332 (510)
T KOG3574|consen  258 LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAGP--RPL--NV  332 (510)
T ss_pred             HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCCC--Ccc--hH
Confidence            4577788887777766677777777777778888887 699999988877766666777777777766532  221  11


Q ss_pred             hhHHHHHHHHhHHHHHHHHhhh-ccCC-C----hhHHHHHHHHHHHHhhhcccc---ccccccc-cCCCchhHHHHHHHh
Q psy11734        276 NVRKVFATLGAVLPGVGALAAS-YVGC-N----TSMVAIFFTIGMAFMGFCYAS---IRVNPID-LSPNFSGTIMALSNG  345 (817)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~----~~~~~~~~~l~~~~~g~~~~~---~~~~~~~-~~p~~~g~a~g~~~~  345 (817)
                      ..|.+...+........+.... .... +    ....+..+....+...+....   ..+..+. .+|..-|+-+.+.|+
T Consensus       333 ~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNT  412 (510)
T KOG3574|consen  333 FLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNT  412 (510)
T ss_pred             HHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHH
Confidence            2233333333333322222221 1111 1    111122221122222222222   2333344 456889999999999


Q ss_pred             hhhhcccccccccceeccccc
Q psy11734        346 LGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       346 ~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      ..++|+-.=..++..+.|..+
T Consensus       413 LsnLGg~wp~tv~l~l~D~lt  433 (510)
T KOG3574|consen  413 LSNLGGNWPGTVALWLADGLT  433 (510)
T ss_pred             HHHhcCCcHHHHHHHhcccCc
Confidence            999999998888888888764

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=90.84  E-value=3.2  Score=46.27  Aligned_cols=166  Identities=16%  Similarity=0.123  Sum_probs=89.9

Q ss_pred             HHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCc-----
Q psy11734        197 AAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDI-----  271 (817)
Q Consensus       197 ~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~-----  271 (817)
                      .+++|-|++....+.....-.++-+.-.-...-+.| .|++.++.+....+..-.+++..+..|+++.  |+++.     
T Consensus       272 ~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li~~P~qii~~~~~~Kws~--g~~P~~~~~~  348 (544)
T PF13000_consen  272 WKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLIDFPFQIILPYYIGKWSA--GSPPLDVDNK  348 (544)
T ss_pred             HHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHHhhhHHHHHHHHhhhhhc--CCCccccccc
Confidence            467888988888887777777776665556666666 6999998777665555455555555555443  22211     


Q ss_pred             ---------------ccchhhHHHHHHHHhH----HHHHHHHhhhccC-CC--hhHHHHHHHHHHHHhhhcccc----cc
Q psy11734        272 ---------------LSRTNVRKVFATLGAV----LPGVGALAASYVG-CN--TSMVAIFFTIGMAFMGFCYAS----IR  325 (817)
Q Consensus       272 ---------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~--~~~~~~~~~l~~~~~g~~~~~----~~  325 (817)
                                     ++.....+..+ .+..    ...++.......+ +.  +......+++...........    ..
T Consensus       349 ~l~~~~~~~~~~~~l~g~~g~L~~Wl-~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~  427 (544)
T PF13000_consen  349 ALPNFSRANKIIRLLVGDAGALRPWL-WAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIM  427 (544)
T ss_pred             cccccccccchhhhhhccchhhHHHH-HHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                           00000011111 1111    1111112222222 11  112222222222222222222    22


Q ss_pred             ccccc-cCCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        326 VNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       326 ~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      +.-.. .+|..-||-+.+.|++.++|+..-..+.=.+.|.+.
T Consensus       428 AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT  469 (544)
T PF13000_consen  428 AFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT  469 (544)
T ss_pred             HHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence            22233 457889999999999999999998888888888763

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=90.77  E-value=2.2  Score=40.17  Aligned_cols=63  Identities=21%  Similarity=0.293  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED  591 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~  591 (817)
                      -.++....+++++++.+.+.+++|.|+.++++.+.+.+-.... +-+  +.+.++..-++.|++.+
T Consensus        42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~--~~~~l~~~s~l~G~~~a  104 (156)
T PF05978_consen   42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP--NSYTLYPASALLGFGAA  104 (156)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh--hHHHHHHHHHHHhhhhH
Confidence            3455666677888888999999999999999999999766554 455  78899999999999988

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>KOG1479|consensus

Probab=89.81  E-value=14  Score=40.48  Aligned_cols=177  Identities=12%  Similarity=0.078  Sum_probs=83.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHH
Q psy11734        604 PVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFAT  683 (817)
Q Consensus       604 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~  683 (817)
                      ..+..++...........+.+-.+.|.++..+.++  +..+.....+.+.+...+.-.+--|...|..    +.-.....
T Consensus        19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~----~~~~~~l~   92 (406)
T KOG1479|consen   19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLR----TRVGYLLS   92 (406)
T ss_pred             HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence            34555566666677888888888877776545444  3333333444444444444444444333310    00111111


Q ss_pred             HHHHHHHHHHHHHHh--hcCch----HHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHH
Q psy11734        684 LGAVLPGVGALAASY--VGCNT----SMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  757 (817)
Q Consensus       684 ~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~  757 (817)
                      ...++ .+..+.+.+  .....    +.......+...+.+.......-...+..+++....++=.+..+.+.+...-..
T Consensus        93 ~~~il-~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~i~t  171 (406)
T KOG1479|consen   93 LIAIL-FIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLRILT  171 (406)
T ss_pred             HHHHH-HHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHHHHH
Confidence            11111 122222223  11111    333444444555555666666666776666887777666666665555444333


Q ss_pred             HHHhhcCCccccHHHHHHHHHHHHHHHHHHHH
Q psy11734        758 VGFLTQNKTLLEWRVVFWIMFLTLFISNVFFV  789 (817)
Q Consensus       758 ~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~  789 (817)
                      -...-|..  .+-...|.+..+..++|.+.+.
T Consensus       172 ka~~~~~~--~sA~~yF~~s~~~~llC~i~y~  201 (406)
T KOG1479|consen  172 KAAFSDSR--TSALIYFITSTVILLLCFVLYL  201 (406)
T ss_pred             HHhcCCCC--ceeehhHHHHHHHHHHHHHHHH
Confidence            33222222  1122344444455555555555

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=89.62  E-value=40  Score=37.88  Aligned_cols=56  Identities=11%  Similarity=-0.110  Sum_probs=35.0

Q ss_pred             chHHHHHHHHHHHHHHhhhhhhhhhhcccc-CCCchHHHHHHHHHHHHHHHhHHHHH
Q psy11734        702 NTSMVAICFTIGMAFMGFCYASIRVNPIDL-SPNFSGTIMALSNGLGCVSGMVAPLT  757 (817)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~i~p~~  757 (817)
                      +.+..++..++.++..|...+.......+. .+++|-.+..+++..-.+|-..|..+
T Consensus       371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l  427 (437)
T TIGR00939       371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL  427 (437)
T ss_pred             ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345556666667777765555554444443 34778777777777766666666655

>KOG1237|consensus

Probab=88.35  E-value=13  Score=43.20  Aligned_cols=174  Identities=12%  Similarity=0.035  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cccccccchhhHHHHH
Q psy11734        605 VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLI-VRDILSRTNVRKVFAT  683 (817)
Q Consensus       605 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g-~~~~~~~~~~r~~~~~  683 (817)
                      ...++..-.+-..+++++...+-.|+.+.+|.+...+.-....+..........+++++|-+- |..+          +.
T Consensus        39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~t----------I~  108 (571)
T KOG1237|consen   39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFT----------IN  108 (571)
T ss_pred             HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHH----------HH
Confidence            344555566777788888899999999999999988888888888888888899999999864 3333          34


Q ss_pred             HHHHHHHHHHHHHHhhc--------------C----c-h--HH---HHHHHHHHHHHHhhhhhhhhhhccccCC----C-
Q psy11734        684 LGAVLPGVGALAASYVG--------------C----N-T--SM---VAICFTIGMAFMGFCYASIRVNPIDLSP----N-  734 (817)
Q Consensus       684 ~~~~~~~~~~~~~~~~~--------------~----~-~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-  734 (817)
                      ++.++...++.++....              .    + +  ..   ....+-+...+.+..-+.....-.|.++    + 
T Consensus       109 ~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~  188 (571)
T KOG1237|consen  109 IGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVE  188 (571)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcch
Confidence            44444444433332210              0    0 0  01   1111111122222333444455555544    1 


Q ss_pred             --chHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        735 --FSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       735 --~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                        .+..-+.-.....+.|..++-.+.-++.|+.+   |...|.+..++..++.++++..
T Consensus       189 ~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~---w~lgf~i~~~~~~lai~iF~~g  244 (571)
T KOG1237|consen  189 VKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVG---WKLGFGIPTVLNALAILIFLPG  244 (571)
T ss_pred             hhCcccchhHHHHHHHHHHHHHHHHHHhhhhccc---ceeeccHHHHHHHHHHHHHHcC
Confidence              23456666777778888888888888877765   9899999999988888777654

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=88.01  E-value=18  Score=41.19  Aligned_cols=46  Identities=2%  Similarity=-0.041  Sum_probs=38.8

Q ss_pred             hhhhh-hhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734        718 GFCYA-SIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ  763 (817)
Q Consensus       718 ~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~  763 (817)
                      ....+ ..|..+.|+.. ++..+-.++.+..+++|..++..+...+.+
T Consensus       158 svvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~  205 (491)
T PF03219_consen  158 SVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS  205 (491)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33344 45788889887 899999999999999999999999888887

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=86.10  E-value=0.45  Score=52.39  Aligned_cols=74  Identities=16%  Similarity=0.195  Sum_probs=61.6

Q ss_pred             cccCCcccccchhhhhhhhccCCCC---cchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhh
Q psy11734          4 MSNFPKGTTFPALCTLLAQWSPPNE---RSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAF   78 (817)
Q Consensus         4 l~G~g~g~~~~~~~~~i~~~~p~~~---rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~   78 (817)
                      +.++|.|+.=|....+.+|-|++++   |.+...++..+.++|..++..+.+++-+ +.||.+.|.+.++..++..+.
T Consensus        42 lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~-~~~~~~~f~i~~~~~~~~~~~  118 (372)
T PF00854_consen   42 LIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQ-NYGWFLGFGIPAIGMLLALIV  118 (372)
T ss_dssp             HHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHH-CS-HHHHHHHHHHHHHHHHHH
T ss_pred             HHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcc-ccchhhhhhHHHHHHHHHHHH
Confidence            5678999999999999999998763   5566778899999999999999999999 999999999987655554443

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG1479|consensus

Probab=84.90  E-value=66  Score=35.34  Aligned_cols=132  Identities=11%  Similarity=0.068  Sum_probs=61.5

Q ss_pred             hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734        201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV  280 (817)
Q Consensus       201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~  280 (817)
                      ++-.++..++........+..+.+-.+.|..+..+.++  +-.......+...+...+.-.+.-|...|..   +..+-.
T Consensus        16 ~~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~---~~~~~~   90 (406)
T KOG1479|consen   16 YNLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLR---TRVGYL   90 (406)
T ss_pred             cccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence            34456666777777777888888877766655444444  3333333444444444444444444333321   011111


Q ss_pred             HHHHHhHHHHHHHHhhhc--cCCC----hhHHHHHHHHHHHHhhhccccccccccccCCCchhHH
Q psy11734        281 FATLGAVLPGVGALAASY--VGCN----TSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTI  339 (817)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a  339 (817)
                      +......+  +..+.+..  ....    ....++...+.+.+.+.......-...+.++|+....
T Consensus        91 l~~~~il~--i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqav  153 (406)
T KOG1479|consen   91 LSLIAILF--IVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAV  153 (406)
T ss_pred             HHHHHHHH--HHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHH
Confidence            11111111  11122222  1111    2333444444455555555555666677777765443

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=83.86  E-value=13  Score=38.01  Aligned_cols=159  Identities=16%  Similarity=0.153  Sum_probs=77.8

Q ss_pred             CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChh-------------HHHHHHHHHHHHHHHHHHHH
Q psy11734        593 ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVA-------------ENGVLSALPFLIMWLVSMSS  659 (817)
Q Consensus       593 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~-------------~~~~~~~~~~~~~~ig~~~~  659 (817)
                      +....+.+|+|+.|...+.+......  .+..+.+.+.++....++.             .......++..+..+|.+..
T Consensus        84 ~~s~~~~LK~K~tw~w~~~Yg~wLv~--~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~~i  161 (267)
T PF07672_consen   84 KPSYKSILKEKETWKWILIYGIWLVV--VVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPFTI  161 (267)
T ss_pred             cchHHHHHccchHHHHHHHHHHHhee--EEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHHhhhceee
Confidence            45678999999998877766554321  1222233444432222221             11223333334444555666


Q ss_pred             HHHHhhhhcccccccchhhHHHHH----HHHHHHHHHHHHHHhhcCch----HHHHHHHHHHHHHHhhhhhhhhhhcccc
Q psy11734        660 SALADYLIVRDILSRTNVRKVFAT----LGAVLPGVGALAASYVGCNT----SMVAICFTIGMAFMGFCYASIRVNPIDL  731 (817)
Q Consensus       660 g~l~dr~g~~~~~~~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (817)
                      |..+...-+|+         ++..    .+.+...+..+.......+.    ....+..++.+++.-...+..-....|.
T Consensus       162 g~~nkt~~kRk---------~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEy  232 (267)
T PF07672_consen  162 GLWNKTNYKRK---------PFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEY  232 (267)
T ss_pred             ccchhhhhhhh---------hHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhh
Confidence            66655433332         2222    22333333333321222122    2222333334444334444444455553


Q ss_pred             ---CCCchHHHHHHHHHHHHHHHhHHHHHHHHhh
Q psy11734        732 ---SPNFSGTIMALSNGLGCVSGMVAPLTVGFLT  762 (817)
Q Consensus       732 ---~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~  762 (817)
                         .|+..|.-.|+.-.++++.-.+.-.+...+.
T Consensus       233 K~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i~  266 (267)
T PF07672_consen  233 KGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVIA  266 (267)
T ss_pred             cCCCcceehhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence               3677899899888888887766666655444

>KOG4332|consensus

Probab=83.17  E-value=16  Score=37.25  Aligned_cols=41  Identities=20%  Similarity=0.089  Sum_probs=34.7

Q ss_pred             HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCc
Q psy11734        231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDI  271 (817)
Q Consensus       231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~  271 (817)
                      -+.||+...+.|.+........++...+.|.++||-|||+-
T Consensus        64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKra  104 (454)
T KOG4332|consen   64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA  104 (454)
T ss_pred             ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccc
Confidence            34589999999988887777778888899999999999984

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=81.82  E-value=73  Score=35.85  Aligned_cols=174  Identities=9%  Similarity=0.099  Sum_probs=95.8

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhC---CChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734        603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIG---LSVAENGVLSALPFL-IMWLVSMSSSALADYLIVRDILSRTNVR  678 (817)
Q Consensus       603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g---~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~g~~~~~~~~~~r  678 (817)
                      |.+..+.+..+|....+.     .---++|.+.   .+++.+.++-...-+ .+.+..++..++.++..+.++..     
T Consensus        27 ~kflpl~Ll~f~I~~ny~-----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~-----   96 (509)
T COG3202          27 KKFLPLALLFFCILFNYN-----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFY-----   96 (509)
T ss_pred             HHHHHHHHHHHHHHHHHH-----HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHH-----
Confidence            445555555544443333     2233444433   345555555555444 56667777788887777665431     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhh--------cCc-----------h------------HHHHHHHHHHHHHHhhhhh-hhhh
Q psy11734        679 KVFATLGAVLPGVGALAASYV--------GCN-----------T------------SMVAICFTIGMAFMGFCYA-SIRV  726 (817)
Q Consensus       679 ~~~~~~~~~~~~~~~~~~~~~--------~~~-----------~------------~~~~~~~~~~~~~~~~~~~-~~~~  726 (817)
                         ...+.+.  .+++++++.        +++           +            |........+-.......+ ..+.
T Consensus        97 ---~~~~~F~--~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~  171 (509)
T COG3202          97 ---IILGFFL--GFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQ  171 (509)
T ss_pred             ---HHHHHHH--HHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHH
Confidence               1122221  222222211        111           1            3344444445444455455 5567


Q ss_pred             hccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCcc-------ccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734        727 NPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTL-------LEWRVVFWIMFLTLFISNVFFVLF  791 (817)
Q Consensus       727 ~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~-------~~~~~~~~~~~~~~~i~~~~~~~~  791 (817)
                      .+.|+.. ++..+-.++.+...+++..++..+..++.++...       ...+..+.+.++...++++...+.
T Consensus       172 faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~  244 (509)
T COG3202         172 FANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYI  244 (509)
T ss_pred             HHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888887 8899999999999999999999998888775310       012334444455545555555444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	817
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	3e-12
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	7e-12
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	1e-10
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	1e-08
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 68.5 bits (168), Expect = 3e-12
 Identities = 33/207 (15%), Positives = 73/207 (35%), Gaps = 11/207 (5%)

Query: 593 ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIM 652
           +     +L +  +W + I+ V      Y I    P Y+ +V   ++ ++     L     
Sbjct: 242 QIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAG 301

Query: 653 WLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTI 712
              ++    ++D +   +    T V  +     A +      A +       +  IC  +
Sbjct: 302 IPGTLLCGWMSDKVFRGNR-GATGVFFMTLVTIATIVYWMNPAGNPT-----VDMICMIV 355

Query: 713 GMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMV-APLTVGFLTQNKTLLEW 770
               +      I ++ ++L+P   +GT    +   G + G V A   VG+         W
Sbjct: 356 IGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---FGW 412

Query: 771 RVVFWIMFLTLFISNVFFVLFGSGEVQ 797
              F +M     ++ +  ++   GE +
Sbjct: 413 DGGFMVMIGGSILAVILLIVVMIGEKR 439

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 67.4 bits (165), Expect = 7e-12
 Identities = 17/135 (12%), Positives = 40/135 (29%), Gaps = 8/135 (5%)

Query: 10  GTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFG 69
           G  +P     +  W    ER  + ++      +G  +      L M++   W    Y+  
Sbjct: 134 GMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPA 193

Query: 70  AIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQ------ 123
             A+L   F   +  + P+S      +E K         +  ++                
Sbjct: 194 FCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKL 253

Query: 124 --GVILSSFYYGYTL 136
              + +++ +     
Sbjct: 254 LWYIAIANVFVYLLR 268

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 63.9 bits (156), Expect = 1e-10
 Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 8/172 (4%)

Query: 195 PWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWL 254
               +L +  +W + I+ V      Y I    P Y+ EV   ++ ++     L       
Sbjct: 244 FMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIP 303

Query: 255 VSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGM 314
            ++    ++D     +    T V  +     A +        +  G  T  +     IG 
Sbjct: 304 GTLLCGWMSDKVFRGNR-GATGVFFMTLVTIATI----VYWMNPAGNPTVDMICMIVIGF 358

Query: 315 AFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMV-APLTVGFLTQN 364
              G     I ++ ++L+P   +GT    +   G + G V A   VG+    
Sbjct: 359 LIYGP-VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF 409

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 57.4 bits (139), Expect = 1e-08
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 514 AKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI-- 571
            +  +     G  LS     Y  +    G +S +   +  L  G +  A   L    +  
Sbjct: 55  VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW 114

Query: 572 AHSGPVSMTVLRFLEGVGE 590
           A S    M VL FL G  +
Sbjct: 115 ATSSIAVMFVLLFLCGWFQ 133

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 55.8 bits (135), Expect = 3e-08
 Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 114 AKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLV-- 171
            +  +     G  LS     Y  +    G +S +   +  L  G +  A + L    V  
Sbjct: 55  VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW 114

Query: 172 AHSGPVSMTVLRFLEGVGE 190
           A S    M VL FL G  +
Sbjct: 115 ATSSIAVMFVLLFLCGWFQ 133

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 1e-04
 Identities = 90/601 (14%), Positives = 152/601 (25%), Gaps = 181/601 (30%)

Query: 125 VILSSFYYGYTLTHI---PGGILSQK-FGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMT 180
           V   +F   +    +   P  ILS++     H +      +  L L   L++        
Sbjct: 24  VFEDAFVDNFDCKDVQDMPKSILSKEEI--DHIIMSKDAVSGTLRLFWTLLSKQ---EEM 78

Query: 181 VLRFLEGVGED----LKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKY------- 229
           V +F+E V       L +P        P     +     D  LY  +    KY       
Sbjct: 79  VQKFVEEVLRINYKFLMSPIKTE-QRQPSMMTRMYIEQRDR-LYNDNQVFAKYNVSRLQP 136

Query: 230 ---------------------M-----SEVIGLSVAENGVLSALPFLIMWL--------- 254
                                +     + V         V   + F I WL         
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196

Query: 255 ------------VSMSSSALADFFI--------ARDILSRTNVRKVFAT--LGAVLPGVG 292
                       +  + ++ +D            +  L R    K +    L  VL  V 
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL--VLLNV- 253

Query: 293 ALAASYVGCNTSMVAIFFTIGMAFMGFC-------YASIRVNPIDLSPNFSGTIMALSNG 345
                    N            AF   C       +  +     D     + T ++L + 
Sbjct: 254 --------QNAKAWN-------AFNLSCKILLTTRFKQV----TDFLSAATTTHISLDHH 294

Query: 346 LGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTI-MALSNGLGCVSGMVAPLTVGFLT 404
                 +        L    +   P DL      T    LS        ++A      L 
Sbjct: 295 S---MTLTPDEVKSLLL-KYLDCRPQDLPREVLTTNPRRLS--------IIAESIRDGLA 342

Query: 405 QNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ--YWNESILPA-----RYVLGIM-- 455
              T   W+ V     L  +I +   VL    E +  +   S+ P        +L ++  
Sbjct: 343 ---TWDNWKHVN-CDKLTTIIESSLNVL-EPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397

Query: 456 -----GCMGVTLALMMRSCLATAITEMVRNVKTTK---HD--FVNTESCFPNANGNHTVV 505
                  M V   L   S +        +  K +                 N    H  +
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVE-------KQPKESTISIPSIYLELKVKL-ENEYALHRSI 449

Query: 506 SKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGG--KHTLGLGFLSTAI 563
              Y      FD D+      L  ++Y +I  H+      ++        L   FL   I
Sbjct: 450 VDHYNIPK-TFDSDDLIP-PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI 507

Query: 564 FTLLTPLIAHSGPVSM-----------------------TVLRFLEGVGEDL-ETPWAAI 599
               T   A    ++                         +L FL  + E+L  + +  +
Sbjct: 508 RHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDL 567

Query: 600 L 600
           L
Sbjct: 568 L 568

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	817
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.94
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.92
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.91
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.91
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.9
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.9
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.86
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.86
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.81
2xut_A	524	Proton/peptide symporter family protein; transport	99.79
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.79
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.73
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.69
2xut_A	524	Proton/peptide symporter family protein; transport	99.57

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.94  E-value=1.9e-25  Score=251.48  Aligned_cols=400  Identities=13%  Similarity=0.118  Sum_probs=291.5

Q ss_pred             hhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHH
Q psy11734        200 LYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRK  279 (817)
Q Consensus       200 ~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~  279 (817)
                      .+.+.++...+..++.....+.+...+|.+.++ + .+..+.|++.....++..+++++.|+++||+|||+.        
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~--------   94 (451)
T 1pw4_A           25 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-G-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF--------   94 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSHHHHHHHTTSS-T-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHH--------
Confidence            344556677777777777777777788887776 5 999999999999999999999999999999999986        


Q ss_pred             HHHHHHhHHHHHHHHhhhc----cCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccc
Q psy11734        280 VFATLGAVLPGVGALAASY----VGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVA  354 (817)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~  354 (817)
                        +..+..+..++.+...+    .. +.+...+...+.+.+.+...+.......|..| ++|++++++.+....+|..++
T Consensus        95 --l~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g  171 (451)
T 1pw4_A           95 --LPAGLILAAAVMLFMGFVPWATS-SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIP  171 (451)
T ss_dssp             --HHHHHHHHHHHHHHHHHCHHHHS-SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSH
T ss_pred             --HHHHHHHHHHHHHHHHhhhhccc-cHHHHHHHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHH
Confidence              77777777777777766    44 55556666666666777777777778788666 899999999999999999999


Q ss_pred             ccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734        355 PLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG  434 (817)
Q Consensus       355 ~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~  434 (817)
                      |.+.+.+.+..+                                            +|+..|++.+++.++..++..++.
T Consensus       172 ~~~~~~l~~~~g--------------------------------------------~w~~~f~~~~~~~~~~~~~~~~~~  207 (451)
T 1pw4_A          172 PLLFLLGMAWFN--------------------------------------------DWHAALYMPAFCAILVALFAFAMM  207 (451)
T ss_dssp             HHHHHHHHHHTC--------------------------------------------CSTTCTHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhc--------------------------------------------cHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999988776531                                            288899988888776665554443


Q ss_pred             ccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccc
Q psy11734        435 SGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDA  514 (817)
Q Consensus       435 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (817)
                      +++++...++..+                               +       .  +        +    ..++       
T Consensus       208 ~~~~~~~~~~~~~-------------------------------~-------~--~--------~----~~~~-------  228 (451)
T 1pw4_A          208 RDTPQSCGLPPIE-------------------------------E-------Y--K--------N----DYPD-------  228 (451)
T ss_dssp             CCSSTTTCCCSCT-------------------------------T-------T--C--------C----C----------
T ss_pred             cCCHhhcCCCChh-------------------------------h-------h--c--------c----cccc-------
Confidence            4332211111000                               0       0  0        0    0000       


Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCc
Q psy11734        515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLET  594 (817)
Q Consensus       515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~  594 (817)
                      +..-+.                        .++...|                                         +.
T Consensus       229 ~~~~~~------------------------~~~~~~~-----------------------------------------~~  243 (451)
T 1pw4_A          229 DYNEKA------------------------EQELTAK-----------------------------------------QI  243 (451)
T ss_dssp             ----------------------------------CCT-----------------------------------------HH
T ss_pred             cchhhh------------------------hcccccc-----------------------------------------cc
Confidence            000000                        0000000                                         01


Q ss_pred             hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh--hccccc
Q psy11734        595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYL--IVRDIL  672 (817)
Q Consensus       595 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~--g~~~~~  672 (817)
                      ..++.+|+|.++...+..++.....+.+..+.|.|+++.+|+++.+++...+...++.+++.++.|+++||+  ++|+.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~  323 (451)
T 1pw4_A          244 FMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT  323 (451)
T ss_dssp             HHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHH
T ss_pred             hHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhH
Confidence            136778899999999999999999999999999999998899999999999999999999999999999999  776532


Q ss_pred             ccchhhHHHHHHHHHHHH-HHHHHHHhhcC-chHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHH
Q psy11734        673 SRTNVRKVFATLGAVLPG-VGALAASYVGC-NTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCV  749 (817)
Q Consensus       673 ~~~~~r~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~  749 (817)
                                ..+..+.. ++++++...+. +.+.......+.+++.+...+.......|..| ++|+++.|+.+...++
T Consensus       324 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  393 (451)
T 1pw4_A          324 ----------GVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYL  393 (451)
T ss_dssp             ----------HHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHH
Confidence                      23333333 45555444432 44555555555666666666666777888887 6799999999999999


Q ss_pred             -HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        750 -SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       750 -g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                       ++.++|.+.|.+.|..+   |+..|++.+++.+++.+..++..+
T Consensus       394 ~g~~~~~~~~g~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~  435 (451)
T 1pw4_A          394 GGSVAASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVVMI  435 (451)
T ss_dssp             HHHHHHHHHHHHHHHSSC---SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHHHHHHHHh
Confidence             99999999999999876   788899888888888777766543

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.92  E-value=1.5e-23  Score=235.24  Aligned_cols=395  Identities=13%  Similarity=0.101  Sum_probs=275.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHH
Q psy11734        204 PVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFAT  283 (817)
Q Consensus       204 ~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~  283 (817)
                      .+.......++............|.+. +.+|.|..+.|++.....++..+++++.|+++||+|||+.          +.
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~----------l~   95 (438)
T 3o7q_A           27 PFALLCSLFFLWAVANNLNDILLPQFQ-QAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAG----------II   95 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHH----------HH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHH----------HH
Confidence            344555566666666666777777755 4589999999999999999999999999999999999986          77


Q ss_pred             HHhHHHHHHHHhh---hccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccc
Q psy11734        284 LGAVLPGVGALAA---SYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVG  359 (817)
Q Consensus       284 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g  359 (817)
                      .+..+..++.+..   ...+ +.+...+...+.+.+.+...+....+..|..| |+|+.++++.+....+|..++|.+.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~  174 (438)
T 3o7q_A           96 TGLFLYALGAALFWPAAEIM-NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ  174 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccccc-cHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7777777766666   4433 56666666666677777777777777777665 79999999999999999999999999


Q ss_pred             eec-ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        360 FLT-QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       360 ~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                      .+. +..+..+....                   ....+.....+ +.....+|++.|++.+++.++..++..+...++.
T Consensus       175 ~l~~~~~~~~~~~~~-------------------~~~~~~~~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~p~~  234 (438)
T 3o7q_A          175 SLILSNVPHQSQDVL-------------------DKMSPEQLSAY-KHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPAL  234 (438)
T ss_dssp             HHHHTSSCCCCHHHH-------------------HHSCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred             HHHhccccccccccc-------------------ccCCcchhhhh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence            888 44321000000                   00000000000 0001124899998777766655554443322111


Q ss_pred             ccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccC
Q psy11734        439 QYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDW  518 (817)
Q Consensus       439 ~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (817)
                      ++++++  +                                                                   +-  
T Consensus       235 ~~~~~~--~-------------------------------------------------------------------~~--  243 (438)
T 3o7q_A          235 QSDNHS--D-------------------------------------------------------------------AK--  243 (438)
T ss_dssp             TTTCCC--C-------------------------------------------------------------------SS--
T ss_pred             cccccc--c-------------------------------------------------------------------cc--
Confidence            110000  0                                                                   00  


Q ss_pred             ChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHH
Q psy11734        519 DERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAA  598 (817)
Q Consensus       519 s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~  598 (817)
                                                  +                        .  +                .+.++++
T Consensus       244 ----------------------------~------------------------~--~----------------~~~~~~~  253 (438)
T 3o7q_A          244 ----------------------------Q------------------------G--S----------------FSASLSR  253 (438)
T ss_dssp             ----------------------------T------------------------T--S----------------HHHHHHH
T ss_pred             ----------------------------c------------------------c--c----------------hhhhHHH
Confidence                                        0                        0  0                0124567


Q ss_pred             hhcCHhHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchh
Q psy11734        599 ILSSLPVWSLIISEVGHDYGFYLISSDLPKY-MSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNV  677 (817)
Q Consensus       599 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~  677 (817)
                      ++|+|+++...+..++.....+.+..+.|.| +++.+|.+..+++...+...+++.+++++.|+++||+++|+.+     
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~-----  328 (438)
T 3o7q_A          254 LARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL-----  328 (438)
T ss_dssp             HTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH-----
T ss_pred             HHhChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH-----
Confidence            8899999999999999999999999999999 8888899999999999999999999999999999999987643     


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHH
Q psy11734        678 RKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLT  757 (817)
Q Consensus       678 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~  757 (817)
                           ..+.++..++++++.+.+ +.+ ......+.+++.+...+.......|..|++++++.++.. ...+++.++|.+
T Consensus       329 -----~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~  400 (438)
T 3o7q_A          329 -----AAYALIAMALCLISAFAG-GHV-GLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPV  400 (438)
T ss_dssp             -----HHHHHHHHHHHHHHHHCC-HHH-HHHHHHHHHHHHTTHHHHHHHHHHSSCGGGHHHHHHHHH-HTTHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHcC-CcH-HHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHH-HHHHHHHHHHHH
Confidence                 355566666666555543 333 333445555666667777778877888866999999877 778999999999


Q ss_pred             HHHhhcCCccccHHHHHHHHHHHHHHHHH
Q psy11734        758 VGFLTQNKTLLEWRVVFWIMFLTLFISNV  786 (817)
Q Consensus       758 ~g~~~~~~g~~~~~~~~~~~~~~~~i~~~  786 (817)
                      .|.+.|..|.  ++..|++.+++.++..+
T Consensus       401 ~g~l~~~~g~--~~~~~~~~~~~~~~~~~  427 (438)
T 3o7q_A          401 MGFVSDAAGN--IPTAELIPALCFAVIFI  427 (438)
T ss_dssp             HHHHHHHHTS--SGGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHhcc--hHHHHHHHHHHHHHHHH
Confidence            9999998752  55666665555444433

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.91  E-value=2.3e-23  Score=237.55  Aligned_cols=441  Identities=14%  Similarity=0.039  Sum_probs=285.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhchhhHHHHh-----hCCcccccchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccchh
Q psy11734        203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEV-----IGLSVAENGVLSALPFLIMWLVSMSSSALADF-FIARDILSRTN  276 (817)
Q Consensus       203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~~  276 (817)
                      +.++...+..++....+++...++|.|+++.     +|.|..+.+++.....++..++++++|+++|| +|||+.     
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~-----   87 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPA-----   87 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHH-----
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHH-----
Confidence            4577888888888999999999999999998     89999999999999999999999999999999 899986     


Q ss_pred             hHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-Cc--hhHHHHHHHhhhhhcccc
Q psy11734        277 VRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NF--SGTIMALSNGLGCVSGMV  353 (817)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~--~g~a~g~~~~~~~lg~~~  353 (817)
                           +..+.++..++.+.....+ +.....+...+.+.+.+...+.......|..| ++  |+++.++.+....+|..+
T Consensus        88 -----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~  161 (491)
T 4aps_A           88 -----VFWGGVLIMLGHIVLALPF-GASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFI  161 (491)
T ss_dssp             -----HHHHHHHHHHHHHHHHSCC-STTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHH
Confidence                 7777777777777776654 55555555666666676777777777777655 66  888999999999999999


Q ss_pred             cccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734        354 APLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF  433 (817)
Q Consensus       354 ~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~  433 (817)
                      +|.+.+.+.+..                                             +|+..|++.++..+++.+...+.
T Consensus       162 ~~~~~~~l~~~~---------------------------------------------g~~~~f~~~~~~~~~~~~~~~~~  196 (491)
T 4aps_A          162 APLIVGAAQEAA---------------------------------------------GYHVAFSLAAIGMFIGLLVYYFG  196 (491)
T ss_dssp             HHHHHHHHHHHS---------------------------------------------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhh---------------------------------------------hHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999887754                                             69999999988888777766554


Q ss_pred             cccccccccCC--C--CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccc
Q psy11734        434 GSGEVQYWNES--I--LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTY  509 (817)
Q Consensus       434 ~~~~~~~~~~~--~--~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (817)
                      .++..++..++  .  .+.+..                                                          
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------------  218 (491)
T 4aps_A          197 GKKTLDPHYLRPTDPLAPEEVK----------------------------------------------------------  218 (491)
T ss_dssp             HHTTCCSCCSCCSCCCSHHHHH----------------------------------------------------------
T ss_pred             CcccccccccCCCCccccchhH----------------------------------------------------------
Confidence            33322111000  0  000000                                                          


Q ss_pred             ccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhh
Q psy11734        510 TTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVG  589 (817)
Q Consensus       510 ~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig  589 (817)
                       ...+..+......+...  ..          -...++....+............. ...+..  ..             
T Consensus       219 -~~~~~~g~~l~~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~-------------  269 (491)
T 4aps_A          219 -PLLVKVSLAVAGFIAII--VV----------MNLVGWNSLPAYINLLTIVAIAIP-VFYFAW--MI-------------  269 (491)
T ss_dssp             -HHHHHCCCCCHHHHHHH--HH----------HHHHSSCCTTHHHHHHHHHHHHHH-HHHHHH--HC-------------
T ss_pred             -HHHHHHHHHHHHHHHHH--HH----------HHhccCcccccchhhhhHHHHHHH-HHHHHH--Hh-------------
Confidence             00000000000000000  00          001122222221111110000000 000000  00             


Q ss_pred             cccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy11734        590 EDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVR  669 (817)
Q Consensus       590 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~  669 (817)
                      .....+..+..+....+......++....+.....++|.|+++..+.+..+.+.......+...++.++.+++.||++||
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r  349 (491)
T 4aps_A          270 SSVKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKN  349 (491)
T ss_dssp             ------------CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hcccccHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhcc
Confidence            00000001111222345555566666666777778899999998888877788888889999999999999999999998


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhh--------cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHH
Q psy11734        670 DILSRTNVRKVFATLGAVLPGVGALAASYV--------GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIM  740 (817)
Q Consensus       670 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~  740 (817)
                      +..     +...+..+..+.+++++++...        +.+.+.......+.+++.+...+.......|..| +.||+++
T Consensus       350 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~  424 (491)
T 4aps_A          350 QPS-----SPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAFNSQMM  424 (491)
T ss_dssp             --------CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSSSST
T ss_pred             CCC-----chHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHH
Confidence            642     2333345555555555554442        1234555555666666666667777788888888 6799999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734        741 ALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGE  795 (817)
Q Consensus       741 g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  795 (817)
                      |+.+...++|+.++|.+.+.+.+..    +...|..++++.+++.+..+...++.
T Consensus       425 g~~~~~~~~g~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (491)
T 4aps_A          425 SMWFLSSSVGSALNAQLVTLYNAKS----EVAYFSYFGLGSVVLGIVLVFLSKRI  475 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGGGGSS----TTHHHHHTHHHHHHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999887653    45677777777777777666654433

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.91  E-value=3.5e-23  Score=235.99  Aligned_cols=312  Identities=13%  Similarity=0.138  Sum_probs=217.1

Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                      ++|.|.+..+.+++.++..+|...++.++|.+.+.-                           ..+...+.+.++++.|+
T Consensus         7 ~~y~~~i~~~a~lg~~~~Gyd~~~i~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~g~   59 (491)
T 4gc0_A            7 SSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVF---------------------------VAPQNLSESAANSLLGF   59 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHGGGGTHHHHHHHH---------------------------TGGGCCCHHHHHHHHHH
T ss_pred             hHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------cCCCCCCcccHHHHHHH
Confidence            456677777788899999999999998888776600                           00000122345678899


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHH------------------HhhhcchHHHHHHHHHHh
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTP------------------LIAHSGPVSMTVLRFLEG  587 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~------------------~a~~~s~~~l~~~R~l~G  587 (817)
                      +.+++.+|+.++++++|+++||+|||+++.++.+++.+++++++                  +++  |+++++++|+++|
T Consensus        60 ~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~--~~~~l~~~R~l~G  137 (491)
T 4gc0_A           60 CVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAG--YVPEFVIYRIIGG  137 (491)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGG--CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhh--hHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999                  477  9999999999999


Q ss_pred             hhcc----------------------------------------------------------------------------
Q psy11734        588 VGED----------------------------------------------------------------------------  591 (817)
Q Consensus       588 ig~~----------------------------------------------------------------------------  591 (817)
                      +|.|                                                                            
T Consensus       138 ~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (491)
T 4gc0_A          138 IGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLL  217 (491)
T ss_dssp             HHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhhhhhh
Confidence            9988                                                                            


Q ss_pred             ---cCch--------------------------------------------hHHhhcCHhHHHH-HHHHHHHHHHHHHHH
Q psy11734        592 ---LETP--------------------------------------------WAAILSSLPVWSL-IISEVGHDYGFYLIS  623 (817)
Q Consensus       592 ---~~~~--------------------------------------------~~~~l~~~~~~~~-~~~~~~~~~~~~~~~  623 (817)
                         ++.|                                            .....+.++.... ....+......+.+.
T Consensus       218 ~~~peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (491)
T 4gc0_A          218 YTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVL  297 (491)
T ss_dssp             GGSCCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCCTHHHHHHHHHHHHHHTCHHHHH
T ss_pred             hcCCCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhhhHHHHhcccHHHHHHHHHHHHHHhhhhHHH
Confidence               0000                                            0001112223332 233333344455556


Q ss_pred             hhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh---c
Q psy11734        624 SDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV---G  700 (817)
Q Consensus       624 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---~  700 (817)
                      .+.|.+.++ .+.+............+...++.++.+++.||+|||+.+          ..+.....++++.+...   .
T Consensus       298 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~----------~~~~~~~~~~~~~l~~~~~~~  366 (491)
T 4gc0_A          298 YYAPEVFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ----------IIGALGMAIGMFSLGTAFYTQ  366 (491)
T ss_dssp             HHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHH----------HHHHHHHHHHHHHHHHHHHTT
T ss_pred             hcchHHHHh-cCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchh----------ccchHHHHHHHHHHHHHHhcc
Confidence            666665555 688888888888888899999999999999999998643          34444444444443321   2


Q ss_pred             CchHHHHHHHHHHHHHHh-hhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCc---cccHHHHHH
Q psy11734        701 CNTSMVAICFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT---LLEWRVVFW  775 (817)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g---~~~~~~~~~  775 (817)
                      .+.+..+....+...+.+ ...+..+.+.+|++| +.|+++.|+.+..+++++.++|.+.+.+.+...   ..++...|+
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~  446 (491)
T 4gc0_A          367 APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYW  446 (491)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHH
T ss_pred             cchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHH
Confidence            222333333333222222 334566688999999 789999999999999999999998887765421   011345678


Q ss_pred             HHHHHHHHHHHHHHHhccCccc
Q psy11734        776 IMFLTLFISNVFFVLFGSGEVQ  797 (817)
Q Consensus       776 ~~~~~~~i~~~~~~~~~~~~~~  797 (817)
                      +.+++++++.++.+++.++.|.
T Consensus       447 i~~~~~~~~~i~~~~~~PETkg  468 (491)
T 4gc0_A          447 IYGCMGVLAALFMWKFVPETKG  468 (491)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCTT
T ss_pred             HHHHHHHHHHHHHHheecCCCC
Confidence            8888888888777666554443

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.90  E-value=1e-24  Score=245.65  Aligned_cols=305  Identities=15%  Similarity=0.156  Sum_probs=229.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccC-cchhHHHHhhhHHHHHhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTAS-WANVFYIFGAIAVLWFAFW   79 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~g-Wr~~f~i~~~~~~i~~~~~   79 (817)
                      .|+++|++.+...|...+++.|++|+|+|++++++...+..+|..++|.+++++.+ ..| ||++|++.+++.++..++.
T Consensus       125 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g~w~~~f~~~~~~~~~~~~~~  203 (451)
T 1pw4_A          125 LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMA-WFNDWHAALYMPAFCAILVALFA  203 (451)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHH-HTCCSTTCTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHH
Confidence            38899999999999999999999999999999999999999999999999999888 888 9999999998888888777


Q ss_pred             hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734         80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL  159 (817)
Q Consensus        80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (817)
                      ++++||+|++.+..++++.+...+  .+.+..++++                                            
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--------------------------------------------  237 (451)
T 1pw4_A          204 FAMMRDTPQSCGLPPIEEYKNDYP--DDYNEKAEQE--------------------------------------------  237 (451)
T ss_dssp             HHHCCCSSTTTCCCSCTTTCCC----------------------------------------------------------
T ss_pred             HhhccCCHhhcCCCChhhhccccc--ccchhhhhcc--------------------------------------------
Confidence            777887765443221111100000  0000000000                                            


Q ss_pred             HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734        160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA  239 (817)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  239 (817)
                                                   ....+...++++|+|.++...+..++.....++...+.|.|+++.+|++..
T Consensus       238 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  288 (451)
T 1pw4_A          238 -----------------------------LTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALD  288 (451)
T ss_dssp             ------------------------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHH
T ss_pred             -----------------------------cccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence                                         000111246788999999999999999999999999999999998899999


Q ss_pred             ccchhhhhhHHHHHHHHhhhHHHHHHH--hhcCcccchhhHHHHHHHHhHHHH-HHHHhhhccCC-ChhHHHHHHHHHHH
Q psy11734        240 ENGVLSALPFLIMWLVSMSSSALADFF--IARDILSRTNVRKVFATLGAVLPG-VGALAASYVGC-NTSMVAIFFTIGMA  315 (817)
Q Consensus       240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~--g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~~  315 (817)
                      +++++..+..++.++++++.|++.||+  ++|+.          ...+..+.. +++..+...++ +.+.......+.++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  358 (451)
T 1pw4_A          289 KSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA----------TGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGF  358 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHH----------HHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh----------HHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHH
Confidence            999999999999999999999999999  77764          444444433 55555554432 34444444444444


Q ss_pred             HhhhccccccccccccCC-CchhHHHHHHHhhhhh-cccccccccceecccccccCCCCCCCCCccchhhcccCcccccc
Q psy11734        316 FMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSG  393 (817)
Q Consensus       316 ~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~l-g~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (817)
                      +.+...+.......+..| ++||+++|+.+.+.++ |++++|.+.|.+.|+.                            
T Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~----------------------------  410 (451)
T 1pw4_A          359 LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF----------------------------  410 (451)
T ss_dssp             HHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS----------------------------
T ss_pred             HHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------------------
Confidence            444555555566666555 6899999999999999 9999999999998875                            


Q ss_pred             ccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734        394 MVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG  436 (817)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~  436 (817)
                                       +|+..|++.+++.+++.++.++..++
T Consensus       411 -----------------g~~~~~~~~~~~~~~~~~~~~~~~~~  436 (451)
T 1pw4_A          411 -----------------GWDGGFMVMIGGSILAVILLIVVMIG  436 (451)
T ss_dssp             -----------------CSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------------CcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence                             58889999988888888776665543

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.90  E-value=4.4e-24  Score=238.15  Aligned_cols=389  Identities=13%  Similarity=0.115  Sum_probs=248.2

Q ss_pred             HHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhh
Q psy11734        198 AILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNV  277 (817)
Q Consensus       198 ~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~  277 (817)
                      +++|||+++......++....+.....++|.|+++.+|.|+.+.|++.....++..++++++|+++||+|||+.      
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~------   75 (417)
T 2cfq_A            2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKY------   75 (417)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCH------
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH------
Confidence            35899999999888888888888888999999998889999999999999999999999999999999999986      


Q ss_pred             HHHHHHHHhHHHHHH---HHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccC---CCchhHHHHHHHhhhhhcc
Q psy11734        278 RKVFATLGAVLPGVG---ALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS---PNFSGTIMALSNGLGCVSG  351 (817)
Q Consensus       278 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~---p~~~g~a~g~~~~~~~lg~  351 (817)
                          +..+..+..+.   +....+.............+.+.+.+...+.......+..   +++++.++|..+....+|.
T Consensus        76 ----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  151 (417)
T 2cfq_A           76 ----LLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGW  151 (417)
T ss_dssp             ----HHHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSSTTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHH
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHH
Confidence                44444333221   1111111000000001111111111111111112222222   2356777888888888999


Q ss_pred             cccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhe
Q psy11734        352 MVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFV  431 (817)
Q Consensus       352 ~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~  431 (817)
                      +++|.+.+.+.+.                                              +|+..|++.++..++..+...
T Consensus       152 ~~~~~l~~~l~~~----------------------------------------------~~~~~f~~~~~~~~~~~~~~~  185 (417)
T 2cfq_A          152 ALGASIVGIMFTI----------------------------------------------NNQFVFWLGSGCALILAVLLF  185 (417)
T ss_dssp             HHHHHHHHHHHHH----------------------------------------------CSHHHHTTTTTTTTTHHHHSC
T ss_pred             HHHHHHHHHHHHh----------------------------------------------chhHHHHHHHHHHHHHHHHHH
Confidence            9999888876542                                              477788766655443333333


Q ss_pred             eecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccc
Q psy11734        432 LFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTT  511 (817)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (817)
                      +..+++++. .++  +                               +                  .+    ++++    
T Consensus       186 ~~~~~~~~~-~~~--~-------------------------------~------------------~~----~~~~----  205 (417)
T 2cfq_A          186 FAKTDAPSS-ATV--A-------------------------------N------------------AV----GANH----  205 (417)
T ss_dssp             SSCCCCSCS-SCS--S-------------------------------S------------------SS----SSCC----
T ss_pred             HcCcccccc-ccc--c-------------------------------c------------------cc----cccc----
Confidence            322221100 000  0                               0                  00    0000    


Q ss_pred             ccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734        512 LDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED  591 (817)
Q Consensus       512 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~  591 (817)
                        ++.                                                          +                
T Consensus       206 --~~~----------------------------------------------------------~----------------  209 (417)
T 2cfq_A          206 --SAF----------------------------------------------------------S----------------  209 (417)
T ss_dssp             --CCC----------------------------------------------------------C----------------
T ss_pred             --ccc----------------------------------------------------------c----------------
Confidence              000                                                          0                


Q ss_pred             cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734        592 LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGL---SVAENGVLSALPFLIMWLVSMSSSALADYLIV  668 (817)
Q Consensus       592 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~---s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~  668 (817)
                       ..++++++|+|+++...+..++....++.+..+.|.|+++.++.   +....+...+...+...++.++.|+++||+||
T Consensus       210 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~  288 (417)
T 2cfq_A          210 -LKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGG  288 (417)
T ss_dssp             -HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred             -HHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcH
Confidence             01234567788888777666666666667777899999875542   23445677777888889999999999999998


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHH-HHH
Q psy11734        669 RDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALS-NGL  746 (817)
Q Consensus       669 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~-~~~  746 (817)
                      |+.+          ..+..+.++.++.+...+ +.+.......+.+++.....+..+....|..| +.||++.+.. +..
T Consensus       289 ~~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~  357 (417)
T 2cfq_A          289 KNAL----------LLAGTIMSVRIIGSSFAT-SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFF  357 (417)
T ss_dssp             HHHH----------HHHHHHHHHHHHHHTTCC-SHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTT
T ss_pred             HHHH----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence            7643          355555555555554433 44444444333444444444555678888888 7799999994 888


Q ss_pred             HHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        747 GCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       747 ~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                      +.+|+.++|.+.|.+.|..+   ++..|.+.+++.+++.+..+...+
T Consensus       358 ~~lg~~~gp~l~G~l~~~~g---~~~~f~~~~~~~l~~~~~~~~~~~  401 (417)
T 2cfq_A          358 KQLAMIFMSVLAGNMYESIG---FQGAYLVLGLVALGFTLISVFTLS  401 (417)
T ss_dssp             HHHHHHHHTHHHHTHHHHSH---HHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred             HhHHHHHhhhhHHHHHHhcC---cHHHHHHHHHHHHHHHHHHHhhhc
Confidence            88999999999999998764   778888888888888776655433

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.86  E-value=2e-22  Score=221.23  Aligned_cols=354  Identities=14%  Similarity=0.106  Sum_probs=261.4

Q ss_pred             HHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHh
Q psy11734        207 SLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGA  286 (817)
Q Consensus       207 ~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~  286 (817)
                      ...+..++...........+|.+.++ +|.|..+.+++.....++..+++++.|+++||+|||+.          ...+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------~~~~~   72 (375)
T 2gfp_A            4 MLVLLVAVGQMAQTIYIPAIADMARD-LNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPV----------ILVGM   72 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTT-SSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCC----------CHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh----------HHHHH
Confidence            34555566666666667777776655 79999999999999999999999999999999999997          66777


Q ss_pred             HHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734        287 VLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI  365 (817)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~  365 (817)
                      .+..++.......+ +.+.......+.+.+.+...+.......|..| |+|++++++.+....+|..++|.+.+.+.+..
T Consensus        73 ~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~  151 (375)
T 2gfp_A           73 SIFMLATLVAVTTS-SLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMW  151 (375)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHH
T ss_pred             HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhc
Confidence            77676666665554 45555555555666666666666777777654 89999999999999999999999999877653


Q ss_pred             cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734        366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI  445 (817)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (817)
                                                                   +|+..|++.+++.++..+...+..|+++++ +++ 
T Consensus       152 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-  184 (375)
T 2gfp_A          152 ---------------------------------------------NWRACYLFLLVLCAGVTFSMARWMPETRPV-DAP-  184 (375)
T ss_dssp             ---------------------------------------------HHHHHHHHHHHHHHHHHCCCCCSSCCCSTT-TCC-
T ss_pred             ---------------------------------------------cHHHHHHHHHHHHHHHHHHHHHHCcccCCC-Ccc-
Confidence                                                         699999998888877766444433332211 000 


Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734        446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV  525 (817)
Q Consensus       446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~  525 (817)
                       +                               +                                   +          
T Consensus       185 -~-------------------------------~-----------------------------------~----------  187 (375)
T 2gfp_A          185 -R-------------------------------T-----------------------------------R----------  187 (375)
T ss_dssp             -C-------------------------------C-----------------------------------C----------
T ss_pred             -c-------------------------------c-----------------------------------c----------
Confidence             0                               0                                   0          


Q ss_pred             HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhH
Q psy11734        526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPV  605 (817)
Q Consensus       526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~  605 (817)
                                                                                        .+.++++.+|+|++
T Consensus       188 ------------------------------------------------------------------~~~~~~~~~~~~~~  201 (375)
T 2gfp_A          188 ------------------------------------------------------------------LLTSYKTLFGNSGF  201 (375)
T ss_dssp             ------------------------------------------------------------------TTTCSTHHHHHHHH
T ss_pred             ------------------------------------------------------------------HHHHHHHHhcCcch
Confidence                                                                              01223566778899


Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734        606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG  685 (817)
Q Consensus       606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~  685 (817)
                      +...+..++.....+.+..+.|.|+++.+|.|+.+++.......++.+++.++.+++.||++++.            ..+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~------------~~~  269 (375)
T 2gfp_A          202 NCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM------------WQS  269 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTHHHHHH------------HHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHH
Confidence            99999999999999999999999999988999999999999999999999999999999998632            122


Q ss_pred             HHH-HHHHHH--HHHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHh
Q psy11734        686 AVL-PGVGAL--AASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFL  761 (817)
Q Consensus       686 ~~~-~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~  761 (817)
                      ... ...+..  ..... +.+.+.......+.+++.+...+.......|..|++||++.|+.+..+++|+.++|.+.|.+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~~~~~~~g~l  349 (375)
T 2gfp_A          270 VICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAML  349 (375)
T ss_dssp             HHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHCCSTTCTHH
T ss_pred             HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222 111111  12221 11334444555566666667777777888888888899999999999999999999999998


Q ss_pred             hcCCccccHHHHHHHH
Q psy11734        762 TQNKTLLEWRVVFWIM  777 (817)
Q Consensus       762 ~~~~g~~~~~~~~~~~  777 (817)
                      .+..+   +...+...
T Consensus       350 ~~~~~---~~~~~~~~  362 (375)
T 2gfp_A          350 PQTGQ---GSLGLLMT  362 (375)
T ss_dssp             HHHHH---HHHHHHHH
T ss_pred             hcCCc---ccHHHHHH
Confidence            77643   66655553

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.86  E-value=6.4e-22  Score=221.84  Aligned_cols=260  Identities=13%  Similarity=0.104  Sum_probs=202.0

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc-ccccC-------------------
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM-SFTAS-------------------   60 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~-~~~~g-------------------   60 (817)
                      .|+++|+|.|...|...+++.|++|+|+|++++++.+....+|..+++.+++++. + ..+                   
T Consensus       123 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~  201 (438)
T 3o7q_A          123 GLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILS-NVPHQSQDVLDKMSPEQLSAYK  201 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHT-SSCCCCHHHHHHSCHHHHHHHH
T ss_pred             HHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccccccccccCCcchhhhhh
Confidence            3889999999999999999999999999999999999999999999999999998 5 444                   


Q ss_pred             ------cchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhch
Q psy11734         61 ------WANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGY  134 (817)
Q Consensus        61 ------Wr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (817)
                            ||+.|++.+.+.++..++.++.  +.||++++.++++                +                    
T Consensus       202 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~----------------~--------------------  243 (438)
T 3o7q_A          202 HSLVLSVQTPYMIIVAIVLLVALLIMLT--KFPALQSDNHSDA----------------K--------------------  243 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCTTTCCCCS----------------S--------------------
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHH--cCCcccccccccc----------------c--------------------
Confidence                  9999998877666665554442  2233221110000                0                    


Q ss_pred             hhccccccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHH
Q psy11734        135 TLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVG  214 (817)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~  214 (817)
                                                                            +++.+.++++++|+|.++...+..++
T Consensus       244 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (438)
T 3o7q_A          244 ------------------------------------------------------QGSFSASLSRLARIRHWRWAVLAQFC  269 (438)
T ss_dssp             ------------------------------------------------------TTSHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred             ------------------------------------------------------ccchhhhHHHHHhChHHHHHHHHHHH
Confidence                                                                  00113457789999999999999999


Q ss_pred             HHHHHHHHhhchhhH-HHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHH
Q psy11734        215 HDYGLYLISTDLPKY-MSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGA  293 (817)
Q Consensus       215 ~~~~~~~~~~~~p~~-l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~  293 (817)
                      .....+....|.|.| +++.+|++..+++.......+++.+++++.|+++||+++|+.          ...+..+..+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~----------~~~~~~~~~~~~  339 (438)
T 3o7q_A          270 YVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKV----------LAAYALIAMALC  339 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH----------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH----------HHHHHHHHHHHH
Confidence            999999999999999 888889999999999999999999999999999999999875          566666666666


Q ss_pred             HhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734        294 LAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII  366 (817)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~  366 (817)
                      +.+.+.+ +.... ..+.+.+++.+...+.......+..|++++++.++.+ ...+|++++|.+.|.+.|..|
T Consensus       340 ~~~~~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~g~l~~~~g  409 (438)
T 3o7q_A          340 LISAFAG-GHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAG  409 (438)
T ss_dssp             HHHHHCC-HHHHH-HHHHHHHHHHTTHHHHHHHHHHSSCGGGHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHcC-CcHHH-HHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            6655554 33333 3334444555556666666666666666889998887 778999999999999998863

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.81  E-value=4.4e-21  Score=210.46  Aligned_cols=254  Identities=15%  Similarity=0.121  Sum_probs=201.1

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      |+++|++.+...|...+++.|++|+|||++++++.+....+|..++|.+++++.+ ..|||+.|++.+++.++..+..++
T Consensus        95 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~  173 (375)
T 2gfp_A           95 SAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDT-MWNWRACYLFLLVLCAGVTFSMAR  173 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSC-HHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999 889999999998888877776666


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      .+||+|++++..                  +                                                 
T Consensus       174 ~~~~~~~~~~~~------------------~-------------------------------------------------  186 (375)
T 2gfp_A          174 WMPETRPVDAPR------------------T-------------------------------------------------  186 (375)
T ss_dssp             SSCCCSTTTCCC------------------C-------------------------------------------------
T ss_pred             HCcccCCCCccc------------------c-------------------------------------------------
Confidence            666543221100                  0                                                 


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN  241 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a  241 (817)
                                                   +.+.++++++|+|+++...+..++.....+....+.|.|+++.+|+++.++
T Consensus       187 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  237 (375)
T 2gfp_A          187 -----------------------------RLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTV  237 (375)
T ss_dssp             -----------------------------CTTTCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHH
T ss_pred             -----------------------------cHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence                                         012235678899999999999999999999999999999999889999999


Q ss_pred             chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHH-HHHHHHh--hhcc-CCChhHHHHHHHHHHHHh
Q psy11734        242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVL-PGVGALA--ASYV-GCNTSMVAIFFTIGMAFM  317 (817)
Q Consensus       242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~-~~~~~~~~~~~~l~~~~~  317 (817)
                      +.......++..+++++.+++.||.+++            ...+... ...+...  .... .++.+.......+.+.+.
T Consensus       238 g~~~~~~~~~~~~~~~~~~~l~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~  305 (375)
T 2gfp_A          238 SILFILPIPAAFFGAWFAGRPNKRFSTL------------MWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGA  305 (375)
T ss_dssp             HHHHHTHHHHHHHHHHHHHTTTTHHHHH------------HHHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999873            2222222 2222221  1111 113333444445555666


Q ss_pred             hhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734        318 GFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  364 (817)
Q Consensus       318 g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~  364 (817)
                      +...+.......|..|++||++.|+.+..+++|+.++|.+.|.+.+.
T Consensus       306 ~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~  352 (375)
T 2gfp_A          306 GMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQT  352 (375)
T ss_dssp             HHTSSTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHCCSTTCTHHHHH
T ss_pred             HHhhHHHHHHHHHhCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            66777777777887779999999999999999999999999987664

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.79  E-value=6.5e-19  Score=202.43  Aligned_cols=177  Identities=14%  Similarity=0.014  Sum_probs=140.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhC------CcccccchhhhhhHHHHHHHHhhhHHHHHHH-hhcCcccc
Q psy11734        202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIG------LSVAENGVLSALPFLIMWLVSMSSSALADFF-IARDILSR  274 (817)
Q Consensus       202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g------~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-g~r~~~~~  274 (817)
                      +|.++...+..++....+++...++|.|+++.+|      .|..+.+++.....++..++.+++|+++||+ |||+.   
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~---   87 (524)
T 2xut_A           11 PRQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNT---   87 (524)
T ss_dssp             --CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHH---
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH---
Confidence            4567888888999999999999999999998889      9999999999999999999999999999999 99885   


Q ss_pred             hhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHH---HHhhhhhc
Q psy11734        275 TNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMAL---SNGLGCVS  350 (817)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~---~~~~~~lg  350 (817)
                             +..+.++..++.+.......+.+...+...+.+.+.+...+.......|..| ++|+++.+.   .+....+|
T Consensus        88 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g  160 (524)
T 2xut_A           88 -------ILWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFG  160 (524)
T ss_dssp             -------HHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHH
Confidence                   6667777777766666554245555555556666666677777777777665 678766655   89999999


Q ss_pred             ccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhh
Q psy11734        351 GMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFF  430 (817)
Q Consensus       351 ~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~  430 (817)
                      .+++|.+.+.+.+..                                             +|+..|++.+++.+++.+..
T Consensus       161 ~~~g~~~~~~l~~~~---------------------------------------------g~~~~f~~~~~~~~~~~~~~  195 (524)
T 2xut_A          161 SFFASLSMPLLLKNF---------------------------------------------GAAVAFGIPGVLMFVATVFF  195 (524)
T ss_dssp             HHHHHHTSTHHHHTS---------------------------------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccc---------------------------------------------cHHHHHHHHHHHHHHHHHHH
Confidence            999999988877653                                             69999999988877776665


Q ss_pred             eee
Q psy11734        431 VLF  433 (817)
Q Consensus       431 ~~~  433 (817)
                      .+.
T Consensus       196 ~~~  198 (524)
T 2xut_A          196 WLG  198 (524)
T ss_dssp             HSS
T ss_pred             HHh
Confidence            543

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.79  E-value=1.5e-19  Score=206.00  Aligned_cols=318  Identities=14%  Similarity=0.055  Sum_probs=191.3

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCC--cchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNE--RSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAF   78 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~--rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~   78 (817)
                      .|+++|+|.|...|...++++|++|+++  |+++.++++.+..+|..++|.+++++.+ ..|||++|++.++..++..+.
T Consensus       114 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~g~~~~f~~~~~~~~~~~~~  192 (491)
T 4aps_A          114 SIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQE-AAGYHVAFSLAAIGMFIGLLV  192 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHH
Confidence            3889999999999999999999999999  7778888999999999999999999999 899999999987766666555


Q ss_pred             hhheeccCCCCCC-CC----CHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccc
Q psy11734         79 WCILCFNDPKSHP-YI----SEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHT  153 (817)
Q Consensus        79 ~~~~~~~~p~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (817)
                      .++..|+.+++++ ..    ++++.++..+....             .-....+.++.          ....++......
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------------~l~~~~~~~~~----------~~~~~~~~~~~~  249 (491)
T 4aps_A          193 YYFGGKKTLDPHYLRPTDPLAPEEVKPLLVKVSL-------------AVAGFIAIIVV----------MNLVGWNSLPAY  249 (491)
T ss_dssp             HHHHHHTTCCSCCSCCSCCCSHHHHHHHHHHCCC-------------CCHHHHHHHHH----------HHHHSSCCTTHH
T ss_pred             HHHhCcccccccccCCCCccccchhHHHHHHHHH-------------HHHHHHHHHHH----------HHhccCcccccc
Confidence            5444333221111 00    11111100000000             00000000000          000000000000


Q ss_pred             hhHHH-HHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHH
Q psy11734        154 LGLGF-LSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSE  232 (817)
Q Consensus       154 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~  232 (817)
                      ..... ........                 ......++.+.+..+..+....+...+..++....+.....++|.|+++
T Consensus       250 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (491)
T 4aps_A          250 INLLTIVAIAIPVF-----------------YFAWMISSVKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAE  312 (491)
T ss_dssp             HHHHHHHHHHHHHH-----------------HHHHHC------------CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHH
T ss_pred             hhhhhHHHHHHHHH-----------------HHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence            00000 00000000                 0000011111111122233345555656666666777778889999999


Q ss_pred             hhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc--------CCChh
Q psy11734        233 VIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV--------GCNTS  304 (817)
Q Consensus       233 ~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  304 (817)
                      ..+.+..+.+....+..++..++.++.|++.||++||+..     +...+..+..+..+++..+...        ..+..
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (491)
T 4aps_A          313 RVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPS-----SPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPL  387 (491)
T ss_dssp             SCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC--------CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTTCCTH
T ss_pred             HhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCC-----chHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHH
Confidence            8888888899999999999999999999999999998641     1222335555555555554432        12344


Q ss_pred             HHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734        305 MVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQN  364 (817)
Q Consensus       305 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~  364 (817)
                      .......+.+.+.+...+.......|..| ++||+++|+.+...++|++++|.+.+.+.|.
T Consensus       388 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~~  448 (491)
T 4aps_A          388 WLVGSWALVILGEMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNAK  448 (491)
T ss_dssp             HHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGGS
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            44455555555666666666777777666 7899999999999999999999998876543

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.73  E-value=1.8e-18  Score=192.65  Aligned_cols=288  Identities=13%  Similarity=0.119  Sum_probs=189.2

Q ss_pred             ccccCCcccccchhhhhhhhccCC--CCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          3 EMSNFPKGTTFPALCTLLAQWSPP--NERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         3 ~l~G~g~g~~~~~~~~~i~~~~p~--~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .+.|++.|..++.....+.++.++  ++|+.+.|.......+|..++|.+++++.+  .+||+.|++.+...++..+..+
T Consensus       108 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~--~~~~~~f~~~~~~~~~~~~~~~  185 (417)
T 2cfq_A          108 IVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT--INNQFVFWLGSGCALILAVLLF  185 (417)
T ss_dssp             HGGGSSTTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHH--HCSHHHHTTTTTTTTTHHHHSC
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH--hchhHHHHHHHHHHHHHHHHHH
Confidence            345555555555555555566543  466888889988999999999999999987  5899999988776555444433


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      + .+++|+++  .++++++      +.    +++                                              
T Consensus       186 ~-~~~~~~~~--~~~~~~~------~~----~~~----------------------------------------------  206 (417)
T 2cfq_A          186 F-AKTDAPSS--ATVANAV------GA----NHS----------------------------------------------  206 (417)
T ss_dssp             S-SCCCCSCS--SCSSSSS------SS----CCC----------------------------------------------
T ss_pred             H-cCcccccc--ccccccc------cc----ccc----------------------------------------------
Confidence            3 33222111  0000000      00    000                                              


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCC---c
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGL---S  237 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~---s  237 (817)
                                                   +....++++++|+|+++...+..++....++....++|.|+++.++.   +
T Consensus       207 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (417)
T 2cfq_A          207 -----------------------------AFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQG  257 (417)
T ss_dssp             -----------------------------CCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHH
T ss_pred             -----------------------------cccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence                                         00112356788999998777766666666666667799998775442   3


Q ss_pred             ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHh
Q psy11734        238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFM  317 (817)
Q Consensus       238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  317 (817)
                      ....+.......++..++.++.|+++||+++|+.          +..+..+.++.+..+...+ +.........+.....
T Consensus       258 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~----------l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~  326 (417)
T 2cfq_A          258 TRVFGYVTTMGELLNASIMFFAPLIINRIGGKNA----------LLLAGTIMSVRIIGSSFAT-SALEVVILKTLHMFEV  326 (417)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH----------HHHHHHHHHHHHHHHTTCC-SHHHHHHHTTHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHH----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHH
Confidence            4445677777788889999999999999999875          5556666666555554443 3333333322233333


Q ss_pred             hhccccccccccccCC-CchhHHHHH-HHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccc
Q psy11734        318 GFCYASIRVNPIDLSP-NFSGTIMAL-SNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMV  395 (817)
Q Consensus       318 g~~~~~~~~~~~~~~p-~~~g~a~g~-~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (817)
                      +...+....+..|..| +.||++.++ .+..+.+|+.++|.+.|.+.|+.                              
T Consensus       327 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~------------------------------  376 (417)
T 2cfq_A          327 PFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI------------------------------  376 (417)
T ss_dssp             HHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHS------------------------------
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhc------------------------------
Confidence            3333334556677666 789999999 48889999999999999888764                              


Q ss_pred             ccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734        396 APLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG  436 (817)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~  436 (817)
                                     +++..|.+.+++.+++.++..++.|+
T Consensus       377 ---------------g~~~~f~~~~~~~l~~~~~~~~~~~~  402 (417)
T 2cfq_A          377 ---------------GFQGAYLVLGLVALGFTLISVFTLSG  402 (417)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             ---------------CcHHHHHHHHHHHHHHHHHHHhhhcC
Confidence                           58888999988888888776655544

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.69  E-value=7.7e-18  Score=191.64  Aligned_cols=319  Identities=13%  Similarity=0.109  Sum_probs=197.9

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-------cccCcchhHHHHhhhHH
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-------FTASWANVFYIFGAIAV   73 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-------~~~gWr~~f~i~~~~~~   73 (817)
                      .|+++|+|.|+..+.+..+++|+.|+++|++..+..+.+..+|..+++.++..+..       ...+||+.+.+..+..+
T Consensus       132 ~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (491)
T 4gc0_A          132 YRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPAL  211 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhh
Confidence            39999999999999999999999999999999999999999999999999887664       12457777777766665


Q ss_pred             HHHhhhhheeccCCCCCCCCCH----HHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccC
Q psy11734         74 LWFAFWCILCFNDPKSHPYISE----KERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFG  149 (817)
Q Consensus        74 i~~~~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (817)
                      +..+..+ ++   ||++++...    ++..+..++....+..+++..+.++                             
T Consensus       212 ~~~~~~~-~~---peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~-----------------------------  258 (491)
T 4gc0_A          212 LFLMLLY-TV---PESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKH-----------------------------  258 (491)
T ss_dssp             HHHHHGG-GS---CCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------
T ss_pred             hhhhhhh-cC---CCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHH-----------------------------
Confidence            5544443 34   444433221    1111111111100000000000000                             


Q ss_pred             CccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHH-HHHHHHHHHHHHHHHhhchhh
Q psy11734        150 GKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWS-LIISEVGHDYGLYLISTDLPK  228 (817)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~i~~~~~~~~~~~~~~~~p~  228 (817)
                                                          +..++++.......++.+.... .....+....+.+.+..|.|.
T Consensus       259 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (491)
T 4gc0_A          259 ------------------------------------SLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPE  302 (491)
T ss_dssp             ------------------------------------HHHHHHHHTTHHHHSCCTHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred             ------------------------------------HHHhhhhhhhHHHHhcccHHHHHHHHHHHHHHhhhhHHHhcchH
Confidence                                                0000011112233444444433 333444445556667777777


Q ss_pred             HHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc---cCCChhH
Q psy11734        229 YMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY---VGCNTSM  305 (817)
Q Consensus       229 ~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  305 (817)
                      +.++ .+.+..+.........+...++.++++++.||+|||+.          ...+.....+++..+..   ...+...
T Consensus       303 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~  371 (491)
T 4gc0_A          303 VFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPL----------QIIGALGMAIGMFSLGTAFYTQAPGIV  371 (491)
T ss_dssp             HHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHH----------HHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred             HHHh-cCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcch----------hccchHHHHHHHHHHHHHHhcccchHH
Confidence            7665 57887777788888899999999999999999999985          44555444444443322   2222233


Q ss_pred             HHHHHHHHHHHhhh-ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhh
Q psy11734        306 VAIFFTIGMAFMGF-CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMA  383 (817)
Q Consensus       306 ~~~~~~l~~~~~g~-~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~  383 (817)
                      ....+.+...+... ..+....+..|+.| +.|+++.|+.+.++++++.+++.+.+.+.+....                
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~----------------  435 (491)
T 4gc0_A          372 ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWL----------------  435 (491)
T ss_dssp             HHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHH----------------
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence            33333333322222 33445678888888 7899999999999999999999988776654210                


Q ss_pred             cccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        384 LSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                                             ....++...|++.+++.+++.++..++.+|++
T Consensus       436 -----------------------~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETk  467 (491)
T 4gc0_A          436 -----------------------VAHFHNGFSYWIYGCMGVLAALFMWKFVPETK  467 (491)
T ss_dssp             -----------------------HHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCT
T ss_pred             -----------------------HhhhhhhHHHHHHHHHHHHHHHHHHheecCCC
Confidence                                   00113556788888888888876665555543

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.57  E-value=2e-15  Score=173.17  Aligned_cols=80  Identities=15%  Similarity=0.249  Sum_probs=70.9

Q ss_pred             cccccCCcccccchhhhhhhhccCCCCcchhHHH---hHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhh
Q psy11734          2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTAL---VFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAF   78 (817)
Q Consensus         2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi---~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~   78 (817)
                      |+++|++.+...|...+++.|++|+++|+++.+.   ......+|..++|.+++++.+ ..|||++|++.+++.++..+.
T Consensus       116 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g~~~~f~~~~~~~~~~~~~  194 (524)
T 2xut_A          116 LFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLK-NFGAAVAFGIPGVLMFVATVF  194 (524)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHH-TSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999887777   999999999999999999998 899999999988776665555


Q ss_pred             hhhe
Q psy11734         79 WCIL   82 (817)
Q Consensus        79 ~~~~   82 (817)
                      .++.
T Consensus       195 ~~~~  198 (524)
T 2xut_A          195 FWLG  198 (524)
T ss_dssp             HHSS
T ss_pred             HHHh
Confidence            4443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	817
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	5e-04

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 40.8 bits (94), Expect = 5e-04
 Identities = 34/283 (12%), Positives = 72/283 (25%), Gaps = 13/283 (4%)

Query: 514 AKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI-- 571
            +  +     G  LS     Y  +    G +S +   +  L  G +  A   L    +  
Sbjct: 52  VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW 111

Query: 572 AHSGPVSMTVLRFLEGVGEDL-ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLP--- 627
           A S    M VL FL G  + +   P    +            V      + +   +P   
Sbjct: 112 ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLL 171

Query: 628 -------KYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV 680
                             A   +L AL    M   +  S  L      ++        K 
Sbjct: 172 FLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKA 231

Query: 681 FATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIM 740
              L A    +  +  + +    ++  +   +    +     +        + + S    
Sbjct: 232 EQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAY 291

Query: 741 ALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFI 783
            L    G    ++       + +            ++ +   +
Sbjct: 292 FLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV 334

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	817
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.95
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.88
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.86
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.48

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=5.5e-27  Score=260.63  Aligned_cols=304  Identities=16%  Similarity=0.166  Sum_probs=244.4

Q ss_pred             CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734        444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ  523 (817)
Q Consensus       444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  523 (817)
                      ..++++|.++..++++++..++|+..++.+.|.+ +                                   |+|+|++|.
T Consensus        18 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~-~-----------------------------------~~g~s~~~~   61 (447)
T d1pw4a_          18 TYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL-V-----------------------------------EQGFSRGDL   61 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHT-T-----------------------------------SSTTCSSCH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-----------------------------------HhCcCHHHH
Confidence            3466889999999999999999999999888765 4                                   679999999


Q ss_pred             HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh--hcchHHHHHHHHHHhhhcc----------
Q psy11734        524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA--HSGPVSMTVLRFLEGVGED----------  591 (817)
Q Consensus       524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~--~~s~~~l~~~R~l~Gig~~----------  591 (817)
                      |++.+++.+++++++++.|+++||+|||+++.+++++.+++.+++++++  ..+++.+++.|+++|++.+          
T Consensus        62 g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i  141 (447)
T d1pw4a_          62 GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTM  141 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence            9999999999999999999999999999999999999999999998874  2278899999999999987          


Q ss_pred             ---------------------------------------------------------------c----------------
Q psy11734        592 ---------------------------------------------------------------L----------------  592 (817)
Q Consensus       592 ---------------------------------------------------------------~----------------  592 (817)
                                                                                     .                
T Consensus       142 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (447)
T d1pw4a_         142 VHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKN  221 (447)
T ss_dssp             HTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCC
T ss_pred             HHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhhh
Confidence                                                                           0                


Q ss_pred             -----------------CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHH
Q psy11734        593 -----------------ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLV  655 (817)
Q Consensus       593 -----------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig  655 (817)
                                       +...++.+++|.++......++.....+++..+.|.|+++..+.+..+.+.......+.++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (447)
T d1pw4a_         222 DYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPG  301 (447)
T ss_dssp             C-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhh
Confidence                             001245678899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-
Q psy11734        656 SMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-  733 (817)
Q Consensus       656 ~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  733 (817)
                      .++.|+++||++|++.       .........+..++........ .+.+......++.++..+...+.......|..| 
T Consensus       302 ~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~  374 (447)
T d1pw4a_         302 TLLCGWMSDKVFRGNR-------GATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPK  374 (447)
T ss_dssp             HHHHHHHHHHTSTTCH-------HHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCT
T ss_pred             hhhhhhhhhhcccccc-------ccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence            9999999999998752       2222222222222332222222 234555555555555555666667778888888 


Q ss_pred             CchHHHHHHHHHHHHHH-HhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734        734 NFSGTIMALSNGLGCVS-GMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS  793 (817)
Q Consensus       734 ~~~g~~~g~~~~~~~~g-~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~  793 (817)
                      +.||++.|+.+..++++ ..++|.+.|.+.|..|   |+..|+.++++.+++.++++...+
T Consensus       375 ~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~  432 (447)
T d1pw4a_         375 KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVVMI  432 (447)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67999999999998885 5668999999999976   778888877777777666665533

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.3e-23  Score=232.98  Aligned_cols=308  Identities=14%  Similarity=0.154  Sum_probs=224.6

Q ss_pred             CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734          1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC   80 (817)
Q Consensus         1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~   80 (817)
                      .|+++|++.|..++...+++.|++|+|||++++++++.+..+|..+++.+++.+.....+||+.|++.+.+.++..++.+
T Consensus       122 ~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~  201 (447)
T d1pw4a_         122 LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAF  201 (447)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999999988776246899999999999999888888


Q ss_pred             heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734         81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS  160 (817)
Q Consensus        81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (817)
                      ++.+++|++.+..+.++.++...+...  ...+++                                             
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------------------------------------------  234 (447)
T d1pw4a_         202 AMMRDTPQSCGLPPIEEYKNDYPDDYN--EKAEQE---------------------------------------------  234 (447)
T ss_dssp             HHCCCSSTTTCCCSCTTTCCC-----------------------------------------------------------
T ss_pred             Hhcccchhhcccchhhhhhhhcccchh--hccccc---------------------------------------------
Confidence            888887776543332222110000000  000000                                             


Q ss_pred             HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734        161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE  240 (817)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  240 (817)
                                                  ....+...++++++|.++......++.....++...|.|.|+++.++++..+
T Consensus       235 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (447)
T d1pw4a_         235 ----------------------------LTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK  286 (447)
T ss_dssp             -----------------------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHH
T ss_pred             ----------------------------cchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccch
Confidence                                        0111233567889999999999999999999999999999999999999999


Q ss_pred             cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-CCChhHHHHHHHHHHHHhhh
Q psy11734        241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAIFFTIGMAFMGF  319 (817)
Q Consensus       241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~g~  319 (817)
                      .+.......+++.++.+++|++.||.++++.       .........+..++....... ..+.........+.+++.+.
T Consensus       287 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  359 (447)
T d1pw4a_         287 SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR-------GATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYG  359 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTSTTCH-------HHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTH
T ss_pred             hhhhhhcchhhhhhhhhhhhhhhhhcccccc-------ccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998763       112222222223333333222 22344444444444444445


Q ss_pred             ccccccccccccCC-CchhHHHHHHHhhhhhc-ccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccc
Q psy11734        320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVS-GMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAP  397 (817)
Q Consensus       320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg-~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (817)
                      ..+.......|..| +++|++.|+.+.+.+++ ...+|.+.|.+.|+.                                
T Consensus       360 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~--------------------------------  407 (447)
T d1pw4a_         360 PVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF--------------------------------  407 (447)
T ss_dssp             HHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--------------------------------
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------------------------
Confidence            55555666667665 78999999999999885 456888999988876                                


Q ss_pred             ccccccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734        398 LTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS  435 (817)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~  435 (817)
                                   +|+..|++.+++.+++.++..++.+
T Consensus       408 -------------g~~~~~~~~~~~~~~~~~~~~~~~~  432 (447)
T d1pw4a_         408 -------------GWDGGFMVMIGGSILAVILLIVVMI  432 (447)
T ss_dssp             -------------CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence                         5788888888777777665544443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=2.4e-21  Score=210.91  Aligned_cols=391  Identities=13%  Similarity=0.099  Sum_probs=246.1

Q ss_pred             HHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhh
Q psy11734        198 AILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNV  277 (817)
Q Consensus       198 ~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~  277 (817)
                      +.+|||++|...+..++..........++|.|+++..|.|..+.|++.+...++..+++++.|+++||+|||+.      
T Consensus         2 ~~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~------   75 (417)
T d1pv7a_           2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKY------   75 (417)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTH------
T ss_pred             CcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH------
Confidence            46899999999999999988888888899999999899999999999999999999999999999999999996      


Q ss_pred             HHHHHHHHhHHHHHHHHhhhccCCChhHH---HHHHHHHHHHhhhccccc-cccccccCC--CchhHHHHHHHhhhhhcc
Q psy11734        278 RKVFATLGAVLPGVGALAASYVGCNTSMV---AIFFTIGMAFMGFCYASI-RVNPIDLSP--NFSGTIMALSNGLGCVSG  351 (817)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~g~~~~~~-~~~~~~~~p--~~~g~a~g~~~~~~~lg~  351 (817)
                          +..+..+..++..............   ...........+...... ........+  +++....+........+.
T Consensus        76 ----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (417)
T d1pv7a_          76 ----LLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGW  151 (417)
T ss_dssp             ----HHHHHHHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhcccc
Confidence                5555555555555544433221111   111111111111111111 111111222  234455666667777777


Q ss_pred             cccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhe
Q psy11734        352 MVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFV  431 (817)
Q Consensus       352 ~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~  431 (817)
                      .++|.+.+.+.+.                                              +++..+........+..++..
T Consensus       152 ~~~~~~~~~l~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~  185 (417)
T d1pv7a_         152 ALGASIVGIMFTI----------------------------------------------NNQFVFWLGSGCALILAVLLF  185 (417)
T ss_dssp             HHHHHHHHHHHHH----------------------------------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccc----------------------------------------------cccccccchhhHHHHHHHHHH
Confidence            8888887766544                                              344445544444444443333


Q ss_pred             eecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccc
Q psy11734        432 LFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTT  511 (817)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (817)
                      +..+++++..+++..+.                             .+                                
T Consensus       186 ~~~~~~~~~~~~~~~~~-----------------------------~~--------------------------------  204 (417)
T d1pv7a_         186 FAKTDAPSSATVANAVG-----------------------------AN--------------------------------  204 (417)
T ss_dssp             SSCCCSCSSSCSSHHHH-----------------------------SC--------------------------------
T ss_pred             HHhcccccchhhhhhhh-----------------------------hh--------------------------------
Confidence            33333222211110000                             00                                


Q ss_pred             ccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734        512 LDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED  591 (817)
Q Consensus       512 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~  591 (817)
                         +...+.                                                                       
T Consensus       205 ---~~~~~~-----------------------------------------------------------------------  210 (417)
T d1pv7a_         205 ---HSAFSL-----------------------------------------------------------------------  210 (417)
T ss_dssp             ---CCCCCH-----------------------------------------------------------------------
T ss_pred             ---cccccc-----------------------------------------------------------------------
Confidence               000000                                                                       


Q ss_pred             cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHH---HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734        592 LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQ---VIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIV  668 (817)
Q Consensus       592 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~---~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~  668 (817)
                        ....+..+++..+....................+.+...   ..+.+....+.......++..++....+++.||.++
T Consensus       211 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~  288 (417)
T d1pv7a_         211 --KLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGG  288 (417)
T ss_dssp             --HHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCH
T ss_pred             --cccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhcccccccccccccchhhhhhhhccccc
Confidence              011122233333333333333333333333333333322   223445566777778888999999999999999998


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHH-HHH
Q psy11734        669 RDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALS-NGL  746 (817)
Q Consensus       669 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~-~~~  746 (817)
                      ++.+          ..+..+..++.+.+...+ +.+.......+.+++.+...+......+|..| +.|+++.|+. +..
T Consensus       289 ~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (417)
T d1pv7a_         289 KNAL----------LLAGTIMSVRIIGSSFAT-SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFF  357 (417)
T ss_dssp             HHHH----------HHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTT
T ss_pred             ccch----------hhhHHHHHHhhhcccccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHH
Confidence            7653          466666666666666654 66666667777777777777888888888887 7799999985 455


Q ss_pred             HHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734        747 GCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGE  795 (817)
Q Consensus       747 ~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  795 (817)
                      ..+|..++|.+.|++.|+.|   ++..|++.+++.++..++..+..+++
T Consensus       358 ~~~g~~i~~~~~G~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~l~~~  403 (417)
T d1pv7a_         358 KQLAMIFMSVLAGNMYESIG---FQGAYLVLGLVALGFTLISVFTLSGP  403 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            67899999999999999976   88889998888888777776664433

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=6.1e-15  Score=159.35  Aligned_cols=289  Identities=12%  Similarity=0.097  Sum_probs=189.6

Q ss_pred             cccCCcccccchhhhhhhhccCC--CCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734          4 MSNFPKGTTFPALCTLLAQWSPP--NERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI   81 (817)
Q Consensus         4 l~G~g~g~~~~~~~~~i~~~~p~--~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~   81 (817)
                      +.+.+.+...+.......+..++  +++.+..+........+..+++.+++.+.+  .+|++.++.......+..++.++
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~  186 (417)
T d1pv7a_         109 VGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT--INNQFVFWLGSGCALILAVLLFF  186 (417)
T ss_dssp             HTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhcccccccccccccccc--ccccccccchhhHHHHHHHHHHH
Confidence            34455555555555444444433  456677888888999999999999999987  67777777777777777777777


Q ss_pred             eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734         82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST  161 (817)
Q Consensus        82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (817)
                      ..+++|++++..++++..             ++                                               
T Consensus       187 ~~~~~~~~~~~~~~~~~~-------------~~-----------------------------------------------  206 (417)
T d1pv7a_         187 AKTDAPSSATVANAVGAN-------------HS-----------------------------------------------  206 (417)
T ss_dssp             SCCCSCSSSCSSHHHHSC-------------CC-----------------------------------------------
T ss_pred             Hhcccccchhhhhhhhhh-------------cc-----------------------------------------------
Confidence            776655433221111110             00                                               


Q ss_pred             HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhH---HHHhhCCcc
Q psy11734        162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKY---MSEVIGLSV  238 (817)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~---l~~~~g~s~  238 (817)
                                                  +.......+.++++..+....................+.+   ..+..+.+.
T Consensus       207 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (417)
T d1pv7a_         207 ----------------------------AFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGT  258 (417)
T ss_dssp             ----------------------------CCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHH
T ss_pred             ----------------------------cccccccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccch
Confidence                                        0011123344444444433333333333333332222222   222345566


Q ss_pred             cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhh
Q psy11734        239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMG  318 (817)
Q Consensus       239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g  318 (817)
                      ...+.......++..++..+.+++.||.++|+.          ...+..+..++.+.+...+ +.+...+...+.+.+.+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~  327 (417)
T d1pv7a_         259 RVFGYVTTMGELLNASIMFFAPLIINRIGGKNA----------LLLAGTIMSVRIIGSSFAT-SALEVVILKTLHMFEVP  327 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHH----------HHHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHH
T ss_pred             hhhcccccccccccccchhhhhhhhcccccccc----------hhhhHHHHHHhhhcccccc-ccchhhHHHHHHHHHHH
Confidence            677788888889999999999999999999885          6677777777766666655 55555566666666666


Q ss_pred             hccccccccccccCC-CchhHHHHHH-HhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734        319 FCYASIRVNPIDLSP-NFSGTIMALS-NGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA  396 (817)
Q Consensus       319 ~~~~~~~~~~~~~~p-~~~g~a~g~~-~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (817)
                      ...+.......|..| ++|+++.|+. +....+|.+++|.+.|.+.|+.                               
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~-------------------------------  376 (417)
T d1pv7a_         328 FLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI-------------------------------  376 (417)
T ss_dssp             HHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-------------------------------
T ss_pred             HHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------
Confidence            666767667777555 7899999986 4566799999999999999886                               


Q ss_pred             cccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734        397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV  438 (817)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~  438 (817)
                                    +++..|++.+++.++..++..++-|+++
T Consensus       377 --------------g~~~~~~~~~~~~~~~~~~~~~~l~~~~  404 (417)
T d1pv7a_         377 --------------GFQGAYLVLGLVALGFTLISVFTLSGPG  404 (417)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHHSCCSS
T ss_pred             --------------CHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence                          5889999998888877776666555443