Psyllid ID: psy11740

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560---

MEVRFNSQRKLFSIIGIIKVEVDQMSFPGMEALKTAYGGVTVSSTLNPNNNGQGFGYYEPENAVPKEQFHVYWNVPTFQCHQYGLNFSEVRRWGIIENENGNFRGNEIALLYDPGVFPALLRAGGGDFVKRNGGVPQEGDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTAKFKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGRHPLWTYSAVNQEASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVRDNNDRNHWLFSASTSLYPSLYVKQANMTEFDRMRFMQGRLDETNRIKAGKPVYPFIWLQSDSSELYVCTFIWFKYFDNKDFLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYLHNTLGPAVKTVRRTPKMYLDDSIDNIISIYTADDVPFIIIYYRNIILLSLFILVESFVYVLLSENPLYLSNSLDDLPAGTPYNTIFGNTLTDIRSDGNVSYMNFVTLKAMCTSQLSHFPRDEHECQVTMETFHHLKLFLVSEDGLYQ

ccEEcccccccEEEEEEEEEEEEcccccccccccccccccEEEEccccccccccccccccccccccccEEEEEccccccHHccccccccccccEEEEccccccccccEEEEEccccccEEEcccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHcccccHHHHHHccccccccccccccccHHHHHHHHHHcccHHHHccccccccccEEcccccccccEEEEEEEEEccccccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHcccccccccccccHHHHHcccEEEEEEEccccccc

cEEEEccHHHHHHHHEEEEEEEEccccccHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccEEEEEccHHHHHHHcccccHHcccccEccHHHccccccEEEEEccccccEEEEcccccEEEEccccHHHccHHHHHHHHHHHHHHHcccccccccEEEEEEEEccccEEHEcHHEEcccccccEEEEEccccccccccccHHHcHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccEccEccccccHHHHHHHHHcHHHHHHccEEEcEccccHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEEccccccccHHHHHHHHHHHHHccccEEEEEccHHHcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccEEEEEEEcccccEEEEEHHHHHHHHHHHHHHHHHHHHHcccccEEcccccccccccccccEccccccccccccccEEEEEEEHHHHHHcccccccccccccEEEHHHHHHEEEEEEccccccc

MEVRFNSQRKLFSIIGIIKVEvdqmsfpgmEALKTAYGgvtvsstlnpnnngqgfgyyepenavpkeqfhvywnvptfqchqyglnfsEVRRWgiienengnfrgneiallydpgvfpallragggdfvkrnggvpqegdlTQHMQTLEAHVvgklipdpafsgelYFISFIDHQLTAKFKSVRARVSLSTrlgiidfehwrpvfeenfGSLDEYRKLSRRiergrhplwtysaVNQEASVRFEQAAKDFMFSSLVLLRKLrpkakwgyygfplcfnytprnqkpqctpsvrdnndrnhwlfsastslypslyvkqanmtEFDRMRFMqgrldetnrikagkpvypfiwlqsdsselyVCTFIWFkyfdnkdflkdsdMINALiipkkmgtngviiwgsshdvnteRKCRSLLNYLHntlgpavktvrrtpkmylddsIDNIIsiytaddvpFIIIYYRNIILLSLFILVESFVYVLLsenplylsnslddlpagtpyntifgntltdirsdgnvsyMNFVTLKAMCTsqlshfprdehecQVTMETFHHLKLFLvsedglyq

mevrfnsqrklFSIIGIIKVEVDQMSFPGMEALKTAYGGVTVSSTLNPNNNGQGFGYYEPENAVPKEQFHVYWNVPTFQCHQYGLNFSEVRRWGIIENENGNFRGNEIALLYDPGVFPALLRAGGGDFVKRNGGVPQEGDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTAKFKSVRARVSLStrlgiidfehwrpvfeenfgsldEYRKLSRRIErgrhplwtysavnQEASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVRDNNDRNHWLFSastslypslYVKQANMTEFDRMRFMQGRLDetnrikagkpvypFIWLQSDSSELYVCTFIWFKYFDNKDFLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYLhntlgpavktvrrtpkmyldDSIDNIISIYTADDVPFIIIYYRNIILLSLFILVESFVYVLLSENPLYLSNSLDDLPAGTPYNTIFGNTLTDIRSDGNVSYMNFVTLKAMCTSQLSHFPRDEHECQVTMETFHHLKLFLVSEDGLYQ

********RKLFSIIGIIKVEVDQMSFPGMEALKTAYGGVTVSSTLNPNNNGQGFGYYEPENAVPKEQFHVYWNVPTFQCHQYGLNFSEVRRWGIIENENGNFRGNEIALLYDPGVFPALLRAGGGDFVKRNGGVPQEGDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTAKFKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGRHPLWTYSAVNQEASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTP****************RNHWLFSASTSLYPSLYVKQANMTEFDRMRFMQGRLDETNRIKAGKPVYPFIWLQSDSSELYVCTFIWFKYFDNKDFLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYLHNTLGPAVKTVRRTPKMYLDDSIDNIISIYTADDVPFIIIYYRNIILLSLFILVESFVYVLLSENPLYLSNSLDDLPAGTPYNTIFGNTLTDIRSDGNVSYMNFVTLKAMCTSQLSHFPRDEHECQVTMETFHHLKLFLVS******

*******QRKLFSIIGIIKVEVDQMSFPGMEALKTAYGGVTVSSTLNPNNNGQGFGYYEPENAVPKEQFHVYWNVPTFQCHQYGLNFSEVRRWGIIENENGNFRGNEIALLYDPGVFPALLRAGGGDFVKRNGGVPQEGDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTAKFKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGRHPLWTYSAVNQEASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVRDNNDRNHWLFSASTSLYPSLYVKQANMTEFDRMRFMQGRLDETNRIKAGKPVYPFIWLQSDSSELYVCTFIWFKYFDNKDFLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYLHNTLGPAVKTVRRTPKMYLDDSIDNIISIYTADDVPFIIIYYRNIILLSLFILVESFVYVLLSENPLYLSNSLDDLPAGTPYNTIFGNTLTDIRSDGNVSYMNFVTLKAMCTSQLSHFPRDEHECQVTMETFHHLKLFLVSEDGLY*

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		563	2.2.26 [Sep-21-2011]
Q08169		382	Hyaluronidase OS=Apis mel	yes	N/A	0.619	0.913	0.397	2e-79
Q9U6V9		367	Hyaluronidase (Fragment)	N/A	N/A	0.577	0.885	0.392	3e-72
P49370		331	Hyaluronidase A OS=Vespul	N/A	N/A	0.571	0.972	0.390	2e-69
P86875		357	Hyaluronidase OS=Vespa ma	N/A	N/A	0.596	0.941	0.386	4e-69
P49371		331	Hyaluronidase OS=Dolichov	N/A	N/A	0.577	0.981	0.381	8e-68
P86687		288	Hyaluronidase (Fragment)	N/A	N/A	0.506	0.989	0.370	6e-57
Q5D7H4		340	Inactive hyaluronidase B	N/A	N/A	0.580	0.961	0.317	4e-53
Q5E985		450	Hyaluronidase-1 OS=Bos ta	yes	N/A	0.568	0.711	0.281	1e-36
A3QVN2		449	Hyaluronidase OS=Echis oc	N/A	N/A	0.568	0.712	0.269	2e-35
Q76HN1		449	Hyaluronidase-1 OS=Rattus	yes	N/A	0.563	0.706	0.284	3e-35

>sp\|Q08169\|HUGA_APIME Hyaluronidase OS=Apis mellifera PE=1 SV=1	Back alignment and function desciption

 Score =  297 bits (760), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 157/395 (39%), Positives = 219/395 (55%), Gaps = 46/395 (11%)

Query: 54  GFGYYEPENAVPKEQFHVYWNVPTFQCHQYGLNFSEV-RRWGIIENENGNFRGNEIALLY 112
           GF    P+N     +F+VYWNVPTF CH+YGL F EV  ++GI++N    FRG EIA+LY
Sbjct: 28  GFVQSTPDNNKTVREFNVYWNVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILY 87

Query: 113 DPGVFPALLRAGGGDFVKRNGGVPQEGDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFI 172
           DPG+FPALL+   G+ V RNGGVPQ G+LT+H+Q    H++ + IPD +F G        
Sbjct: 88  DPGMFPALLKDPNGNVVARNGGVPQLGNLTKHLQVFRDHLINQ-IPDKSFPG-------- 138

Query: 173 DHQLTAKFKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGRHPLWTY 232
                               +G+IDFE WRP+F +N+ SL  Y+KLS  + R  HP W  
Sbjct: 139 --------------------VGVIDFESWRPIFRQNWASLQPYKKLSVEVVRREHPFWDD 178

Query: 233 SAVNQEASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVR 292
             V QEA  RFE+  + FM  +L   +++RP A WGYY +P C+N TP     QC  +  
Sbjct: 179 QRVEQEAKRRFEKYGQLFMEETLKAAKRMRPAANWGYYAYPYCYNLTPNQPSAQCEATTM 238

Query: 293 DNNDRNHWLFSASTSLYPSLYVKQANMTEFDRMRFMQGRLDETNRIKAGKPVYPFIWLQS 352
             ND+  WLF +   L PS+Y++  N+T  +R+  + GR+ E  RI            Q 
Sbjct: 239 QENDKMSWLFESEDVLLPSVYLRW-NLTSGERVGLVGGRVKEALRIAR----------QM 287

Query: 353 DSSELYVCTFIWFKYFDNKDF-LKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRS 411
            +S   V  + W+KY D +D  L  +D+   L     +G +G IIWGSS D+NT+ KC  
Sbjct: 288 TTSRKKVLPYYWYKYQDRRDTDLSRADLEATLRKITDLGADGFIIWGSSDDINTKAKCLQ 347

Query: 412 LLNYLHNTLGPAVKTV----RRTPKMYLDDSIDNI 442
              YL+N LGPAVK +        ++ +D S+D +
Sbjct: 348 FREYLNNELGPAVKRIALNNNANDRLTVDVSVDQV 382

May play a role in reproduction.
Apis mellifera (taxid: 7460)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 5

>sp\|Q9U6V9\|HUGA_POLAN Hyaluronidase (Fragment) OS=Polistes annularis PE=1 SV=1	Back alignment and function description

>sp\|P49370\|HUGAA_VESVU Hyaluronidase A OS=Vespula vulgaris PE=1 SV=1	Back alignment and function description

>sp\|P86875\|HUGA_VESMG Hyaluronidase OS=Vespa magnifica PE=1 SV=2	Back alignment and function description

>sp\|P49371\|HUGA_DOLMA Hyaluronidase OS=Dolichovespula maculata PE=1 SV=1	Back alignment and function description

>sp\|P86687\|HUGA_POLPI Hyaluronidase (Fragment) OS=Polybia paulista PE=1 SV=1	Back alignment and function description

>sp\|Q5D7H4\|HUGAB_VESVU Inactive hyaluronidase B OS=Vespula vulgaris PE=1 SV=1	Back alignment and function description

>sp\|Q5E985\|HYAL1_BOVIN Hyaluronidase-1 OS=Bos taurus GN=HYAL1 PE=2 SV=1	Back alignment and function description

>sp\|A3QVN2\|HYAL_ECHOC Hyaluronidase OS=Echis ocellatus PE=2 SV=1	Back alignment and function description

>sp\|Q76HN1\|HYAL1_RAT Hyaluronidase-1 OS=Rattus norvegicus GN=Hyal1 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		563
328712188		429	PREDICTED: hyaluronidase-like [Acyrthosi	0.579	0.759	0.461	4e-98
307180582		342	Hyaluronoglucosaminidase [Camponotus flo	0.587	0.967	0.425	3e-86
322794122		340	hypothetical protein SINV_05897 [Solenop	0.591	0.979	0.420	6e-80
345491628		376	PREDICTED: hyaluronidase-like [Nasonia v	0.595	0.890	0.413	3e-79
340724556		736	PREDICTED: hyaluronidase-like [Bombus te	0.596	0.456	0.408	7e-79
350397799		736	PREDICTED: hyaluronidase-like [Bombus im	0.596	0.456	0.406	2e-78
160948555		379	hyaluronidase [Anoplius samariensis]	0.611	0.907	0.388	1e-77
58585182		382	hyaluronidase precursor [Apis mellifera]	0.619	0.913	0.397	1e-77
332022548		409	Hyaluronidase [Acromyrmex echinatior]	0.577	0.794	0.415	2e-77
307197100		757	Hyaluronoglucosaminidase [Harpegnathos s	0.573	0.426	0.410	3e-77

>gi\|328712188\|ref\|XP_001944830.2\| PREDICTED: hyaluronidase-like [Acyrthosiphon pisum]	Back alignment and taxonomy information

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 173/375 (46%), Positives = 238/375 (63%), Gaps = 49/375 (13%)

Query: 62  NAVPKEQFHVYWNVPTFQCHQYGLNFSEVRRWGIIENENGNFRGNEIALLYDPGVFPALL 121
           N V  ++F VYWNVPTFQCH+YG  F EV  WGI +N + NFRG++I+LLYDPG+FPAL+
Sbjct: 77  NDVQSDEFRVYWNVPTFQCHKYGYKFDEVAEWGIQQNVDDNFRGDKISLLYDPGLFPALM 136

Query: 122 RAGG--GDFVKRNGGVPQEGDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTAK 179
           + GG   D V RNGGVP EG+LT+H++     +V KL+PDP+FSG               
Sbjct: 137 QGGGSRADHVIRNGGVPHEGNLTKHLELFTRDLVTKLVPDPSFSG--------------- 181

Query: 180 FKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGRHPLWTYSAVNQEA 239
                        L IIDFEHWRP++EENFGSL  Y+  S  IE+  HP W    + +EA
Sbjct: 182 -------------LAIIDFEHWRPMYEENFGSLSLYKDYSMEIEKYNHPYWQKEDLQKEA 228

Query: 240 SVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVRDNNDRNH 299
           S +FE+AA  F+  +L + + LRP A WGYYG+P CFNYTP+N + +C+ +V  NN+++ 
Sbjct: 229 SRKFEKAAIQFLKRTLQVAKSLRPNAYWGYYGYPFCFNYTPKNDQAKCSSNVMKNNEKSK 288

Query: 300 WLFSASTSLYPSLYVKQANMTEFDRMRFMQGRLDETNRI----KAGKPVYPFIWLQSDSS 355
           WLF  ST+++PSLY K  NM+   R RFMQGR+ E  R+       K VYP+ W+     
Sbjct: 289 WLFEESTAIFPSLYFKYENMSSEKRSRFMQGRMAEAMRVGNMGNTKKIVYPYTWI----- 343

Query: 356 ELYVCTFIWFKYFDNKDFLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNY 415
                     KY+D K F++ +D++N+  IPKK   +GVIIWG+S+DVN+E+KC+++ NY
Sbjct: 344 ----------KYYDTKQFVEKADLMNSFSIPKKNDASGVIIWGASNDVNSEKKCKAMHNY 393

Query: 416 LHNTLGPAVKTVRRT 430
           L   LGP +K   ++
Sbjct: 394 LTGVLGPTLKAFYKS 408

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|307180582\|gb\|EFN68537.1\| Hyaluronoglucosaminidase [Camponotus floridanus]	Back alignment and taxonomy information

>gi\|322794122\|gb\|EFZ17331.1\| hypothetical protein SINV_05897 [Solenopsis invicta]	Back alignment and taxonomy information

>gi\|345491628\|ref\|XP_003426664.1\| PREDICTED: hyaluronidase-like [Nasonia vitripennis]	Back alignment and taxonomy information

>gi\|340724556\|ref\|XP_003400647.1\| PREDICTED: hyaluronidase-like [Bombus terrestris]	Back alignment and taxonomy information

>gi\|350397799\|ref\|XP_003484995.1\| PREDICTED: hyaluronidase-like [Bombus impatiens]	Back alignment and taxonomy information

>gi\|160948555\|dbj\|BAF93867.1\| hyaluronidase [Anoplius samariensis]	Back alignment and taxonomy information

>gi\|58585182\|ref\|NP_001011619.1\| hyaluronidase precursor [Apis mellifera] gi\|585279\|sp\|Q08169.1\|HUGA_APIME RecName: Full=Hyaluronidase; Short=Hya; AltName: Full=Allergen Api m II; AltName: Full=Hyaluronoglucosaminidase; AltName: Allergen=Api m 2; Flags: Precursor gi\|155680\|gb\|AAA27730.1\| hyaluronidase [Apis mellifera]	Back alignment and taxonomy information

>gi\|332022548\|gb\|EGI62851.1\| Hyaluronidase [Acromyrmex echinatior]	Back alignment and taxonomy information

>gi\|307197100\|gb\|EFN78468.1\| Hyaluronoglucosaminidase [Harpegnathos saltator]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		563
UNIPROTKB\|Q5D7H4		340	Q5D7H4 "Inactive hyaluronidase	0.435	0.720	0.305	9.2e-53
WB\|WBGene00011923		458	chhy-1 [Caenorhabditis elegans	0.397	0.489	0.331	1.4e-42
UNIPROTKB\|H9KYW7		442	HYAL1 "Uncharacterized protein	0.445	0.567	0.311	9.4e-41
MGI\|MGI:96298		462	Hyal1 "hyaluronoglucosaminidas	0.454	0.554	0.312	1.1e-39
UNIPROTKB\|G1SPB4		457	HYAL1 "Uncharacterized protein	0.454	0.560	0.32	1.3e-39
ZFIN\|ZDB-GENE-081104-366		428	hyal3 "hyaluronoglucosaminidas	0.413	0.544	0.322	5.3e-38
ZFIN\|ZDB-GENE-070112-2372		486	hyal6 "hyaluronoglucosaminidas	0.406	0.471	0.334	7.1e-38
ZFIN\|ZDB-GENE-060312-42		449	zgc:136804 "zgc:136804" [Danio	0.399	0.501	0.301	2.1e-36
UNIPROTKB\|F1NFN8		442	HYALP1 "Uncharacterized protei	0.404	0.515	0.309	1.1e-35
UNIPROTKB\|H9KZ20		483	HYAL2 "Uncharacterized protein	0.413	0.482	0.300	2e-33

UNIPROTKB\|Q5D7H4 Q5D7H4 "Inactive hyaluronidase B" [Vespula vulgaris (taxid:7454)]	Back alignment and assigned GO terms

 Score = 348 (127.6 bits), Expect = 9.2e-53, Sum P(2) = 9.2e-53
 Identities = 79/259 (30%), Positives = 127/259 (49%)

Query:   175 QLTAKFKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGRHPLWTYSA 234
             Q T +   +  +  ++  +G+I F +WRP+F  N  +L   + +S  + R  HP W  S 
Sbjct:    88 QFTKELDEIYPK-KIAGGIGVIHFHNWRPIFRRNVDNLKINKDISIDLVRKEHPKWDKSM 146

Query:   235 VNQEASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVRDN 294
             + +EAS RFE +AK FM  +L L +++R K +WGY+G+P C + +       C       
Sbjct:   147 IEKEASNRFETSAKIFMEKTLKLAKEIRKKTEWGYHGYPHCLSGSTDKPSFDCDALSMSE 206

Query:   295 NDRNHWLFSASTSLYPSLYVKQANMTEFDRMRFMQGRLDETNRIKAGKPVYPFIWLQSDS 354
             ND+  WLF+    L PS+Y+K     + +++  +Q RL E  RI       P        
Sbjct:   207 NDKMSWLFNNQNVLLPSIYLKNVLKPD-EKIHLVQERLKEAIRISKNFKHLP-------- 257

Query:   355 SELYVCTFIWFKYFDNKD-FLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLL 413
                 V  + W+ Y D +  FL ++D+ N        G +G+IIWG S+++   ++C  L 
Sbjct:   258 ---KVLPYWWYTYQDKESIFLTEADVKNTFKEILTNGADGIIIWGVSYELTDRKRCEKLK 314

Query:   414 NYLHNTLGPAVKTVRRTPK 432
              YL   LGP    V +  K
Sbjct:   315 EYLMKILGPIAFKVTKAVK 333

GO:0005576 "extracellular region" evidence=IDA

WB\|WBGene00011923 chhy-1 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

UNIPROTKB\|H9KYW7 HYAL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

MGI\|MGI:96298 Hyal1 "hyaluronoglucosaminidase 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|G1SPB4 HYAL1 "Uncharacterized protein" [Oryctolagus cuniculus (taxid:9986)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-081104-366 hyal3 "hyaluronoglucosaminidase 3" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-070112-2372 hyal6 "hyaluronoglucosaminidase 6" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-060312-42 zgc:136804 "zgc:136804" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NFN8 HYALP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|H9KZ20 HYAL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q08169	HUGA_APIME	3, ., 2, ., 1, ., 3, 5	0.3974	0.6198	0.9136	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1	LOW CONFIDENCE prediction!
3rd Layer	3.2.1.35	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		563
pfam01630		339	pfam01630, Glyco_hydro_56, Hyaluronidase	2e-93
pfam02931		215	pfam02931, Neur_chan_LBD, Neurotransmitter-gated i	0.001

>gnl\|CDD\|201894 pfam01630, Glyco_hydro_56, Hyaluronidase	Back alignment and domain information

 Score =  289 bits (741), Expect = 2e-93
 Identities = 116/376 (30%), Positives = 175/376 (46%), Gaps = 48/376 (12%)

Query: 63  AVPKEQFHVYWNVPTFQCHQYGLNFSEVRRWGIIENENGNFRGNEIALLYDP--GVFPAL 120
            +P   F V WNVPT  C        +V  + II N    F G  I + Y    G++P +
Sbjct: 6   VIPNRPFLVVWNVPTEMCLGRFGVPLDVSLFSIIANPRQTFVGQNITIFYVDRLGLYPYI 65

Query: 121 LRAGGGDFVKRNGGVPQEGDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTAKF 180
              G       NGG+PQ G LT H+   +  +    IPDP F+G                
Sbjct: 66  DPTGE---KPVNGGIPQLGSLTAHLAKAKKDIE-HYIPDPDFNG---------------- 105

Query: 181 KSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGRHPLWTYSAVNQEAS 240
                       L +ID+E WRP +  N+G  D Y+K S  + + +HP W  + V Q+A 
Sbjct: 106 ------------LAVIDWEEWRPTWARNWGPKDIYKKRSIELVQQQHPDWDPTEVEQKAK 153

Query: 241 VRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPR--NQKPQCTPSVRDNNDRN 298
            +FE+AA+ FM  +L L + LRP A WGYY FP C+N+     N   QC       ND+ 
Sbjct: 154 RQFEKAARAFMEETLKLGKALRPNALWGYYLFPDCYNHDYNQPNYTGQCPAVEMKRNDQL 213

Query: 299 HWLFSASTSLYPSLYVKQANM-TEFDRMRFMQGRLDETNRIKAGKPVYPFIWLQSDSSEL 357
            WL+  ST+L+PS+Y+      +    + +++ R+ E  R+               S  L
Sbjct: 214 SWLWKESTALFPSIYLPPRLKSSRKVGL-YVRHRVKEAIRVSKVG---------DASHPL 263

Query: 358 YVCTFIWFKYFDNKD-FLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYL 416
            V  +I + ++D  D FL + D+++ +     +G  G++IWGSS   N++  C+ L  Y+
Sbjct: 264 PVFVYIRYVFYDRTDTFLSEDDLVSTIGESAALGAAGIVIWGSSSLTNSKESCQHLREYM 323

Query: 417 HNTLGPAVKTVRRTPK 432
             TLGP +  V    K
Sbjct: 324 DTTLGPYIVNVTLAAK 339

Length = 339

>gnl\|CDD\|217293 pfam02931, Neur_chan_LBD, Neurotransmitter-gated ion-channel ligand binding domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		563
PF01630		337	Glyco_hydro_56: Hyaluronidase; InterPro: IPR018155	100.0
PF02931		217	Neur_chan_LBD: Neurotransmitter-gated ion-channel	94.14
TIGR00860		459	LIC Cation transporter family protein. selective w	84.72
KOG3643\|consensus		459		82.08
KOG3642\|consensus		466		80.83

>PF01630 Glyco_hydro_56: Hyaluronidase; InterPro: IPR018155 O-Glycosyl hydrolases 3	Back alignment and domain information

Probab=100.00  E-value=5.6e-131  Score=995.68  Aligned_cols=321  Identities=40%  Similarity=0.864  Sum_probs=267.9

Q ss_pred             CCCCCCceEEEeecCccccc-cCCCcccccccceeEeCCCCcccCCcEEEEeCC--CCCceEecCCCCccccccCCCCCC
Q psy11740         62 NAVPKEQFHVYWNVPTFQCH-QYGLNFSEVRRWGIIENENGNFRGNEIALLYDP--GVFPALLRAGGGDFVKRNGGVPQE  138 (563)
Q Consensus        62 ~~~~~~pF~v~WNVPT~~C~-k~gv~~~~L~~fgIv~N~~~~FrGq~ItIFY~~--GlyPyi~~~~~G~~~~vNGGlPQ~  138 (563)
                      |+++++||.|+|||||++|+ ++++++ +|+.||||+|++++|+||+|||||++  |+||||++  .|++  +||||||+
T Consensus         3 p~~~~~pF~~~WN~Pt~~C~~~~~v~l-~L~~f~Iv~N~~~~f~G~~itIfY~~~lG~yP~~~~--~~~~--~NGGlPQ~   77 (337)
T PF01630_consen    3 PIIPNRPFVVYWNVPTEMCHKRFNVFL-DLSAFGIVQNPNQTFRGQNITIFYEPRLGLYPYYDE--QGKP--VNGGLPQN   77 (337)
T ss_dssp             SSBTTBSSEEEEES-GGGGGGGT---T-CHCCCTEB--GGG-SSSSSEEEEESTSSST--EEEE--TSEE--ETTSSGGG
T ss_pred             CCCCCCCEEEEECCCHHHHhhccCCCC-CchhcCCeeCccccccCCeEEEEeCCCCCCcceECC--CCCe--ecCCCCCC
Confidence            79999999999999999998 688888 69999999999999999999999999  99999994  5655  99999999


Q ss_pred             CCHHHHHHHHHhhhccCcccCCCCCCCcchhhhhhhhhhhhhhhhhhhccccceeEEEEccccccccccccCChHHHHHH
Q psy11740        139 GDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTAKFKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKL  218 (563)
Q Consensus       139 gnLt~HL~ka~~DI~~~~IPd~~F~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~LaVIDwE~WRPvw~rNWgsk~iYR~~  218 (563)
                      |||++||+|+++||. ++||+++|+|                            |||||||+|||+|+||||+|+|||++
T Consensus        78 ~~L~~HL~k~~~dI~-~~ip~~~f~G----------------------------LaVIDwE~WRP~w~rNw~~k~iYr~~  128 (337)
T PF01630_consen   78 GNLSAHLEKAKEDIN-EYIPDPDFSG----------------------------LAVIDWEEWRPLWRRNWGSKDIYRNE  128 (337)
T ss_dssp             S-HHHHHHHHHHHHH-HHS--TT--S----------------------------EEEEE--SS-SSGGG--GGGHHHHHH
T ss_pred             CcHHHHHHHHHHHHH-HhCCCCCCCc----------------------------ceEEeccccccchhhcCCCcHHHHHH
Confidence            999999999999999 9999999999                            99999999999999999999999999


Q ss_pred             HHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceeeccCCccCCCCCCC--CCCCCCccccccCC
Q psy11740        219 SRRIERGRHPLWTYSAVNQEASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRN--QKPQCTPSVRDNND  296 (563)
Q Consensus       219 S~~Lvr~~hP~ws~~~v~~~Ak~eFE~AAK~FM~eTL~LgK~LRP~alWGYYgFP~CyNy~~~~--~tg~Cp~~~~~~ND  296 (563)
                      |++|||++||+|++++++++|+++||+|||+||+|||+|||+|||+|+||||+||+|||+++.+  |||+||+.++.+||
T Consensus       129 S~~lv~~~hp~ws~~~v~~~A~~~FE~aAr~fM~eTL~l~k~lRP~~lWGyY~FP~CyN~~~~~~~ytg~C~~~~~~~ND  208 (337)
T PF01630_consen  129 SIELVRQQHPDWSEKEVEKEAKKEFEKAARKFMEETLRLAKRLRPNALWGYYLFPDCYNYDYKQPNYTGSCPEIEKKRND  208 (337)
T ss_dssp             HHHHHHHHSTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEBT-S---TTCTSCTS--SS--HHHHHHHH
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCCCCCCCcccCCcCCCCChHHHHhcc
Confidence            9999999999999999999999999999999999999999999999999999999999998754  58999999999999


Q ss_pred             ccccccccccccccccccccccCCcccccc--hhhhhhhhhhhcc----C--CCCeeeEeecccCCccceeeeeeeeeec
Q psy11740        297 RNHWLFSASTSLYPSLYVKQANMTEFDRMR--FMQGRLDETNRIK----A--GKPVYPFIWLQSDSSELYVCTFIWFKYF  368 (563)
Q Consensus       297 ~L~WLW~eSTALYPSIYL~~~~l~~~~~~~--fVr~RV~EA~RVa----~--~~PVypY~~~~~~~~~~y~~~f~r~~Y~  368 (563)
                      +|.|||++||||||||||+ ..++++.+.+  ||++||+||+|||    .  ++|||||+               |+.|+
T Consensus       209 ~L~WLw~~StaLyPSIYL~-~~l~~s~~~~l~fV~~Rv~EA~Rva~~~~~~~~~pV~~Y~---------------r~~~~  272 (337)
T PF01630_consen  209 QLSWLWKESTALYPSIYLP-KSLKSSENARLYFVRGRVKEAMRVAKLPKPPYPLPVFPYT---------------RYVYY  272 (337)
T ss_dssp             TTHHHHHH-SEEB-B---B-CCSTHHHHHHHHHHHHHHHHHHHHHHHTSSTT--EEEEEE---------------ESEET
T ss_pred             cchhhhhhcCeeceEEecc-hhcCCccchhHHHHHHHHHHHHHHHhhcCCCCCcceeeee---------------ecccc
Confidence            9999999999999999999 8888877664  8999999999999    2  37999999               98887


Q ss_pred             CC-CCCCchhHHHHHhhhhhhcCCCeEEEecCCCCCCcHHHhHHHHHhhhcchhhHHHHhhccch
Q psy11740        369 DN-KDFLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYLHNTLGPAVKTVRRTPK  432 (563)
Q Consensus       369 d~-~~fLsq~DL~nTIgesaalGa~GVVIWGss~d~~S~~~C~~L~~Yl~~tLGPyI~nVt~aak  432 (563)
                      +. .+|||++||++||||+++|||+||||||+|++++|+++|++|++||+++|||||+|||+|||
T Consensus       273 ~~~~~fLs~~DL~~TigesaalGa~GvViWG~s~~~~s~~~C~~l~~Yl~~~LGPyi~nVt~aak  337 (337)
T PF01630_consen  273 DSTDEFLSQEDLVNTIGESAALGAAGVVIWGSSNDVNSKESCQKLRNYLDTTLGPYIVNVTTAAK  337 (337)
T ss_dssp             TEEEEE--HHHHHHHHHHHHHTT-SEEEEE--GGGSSSHHHHHHHHHHHHHTHHHHHHHHHHHH-
T ss_pred             cCccccchhhHHHHHHHHHHHcCCCeEEEeeccccccChHHHHHHHHHHHhchHHHHHHHHhhcC
Confidence            75 45999999999999999999999999999999999999999999999999999999999997

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 56 GH56 from CAZY comprises enzymes with only one known activity; hyaluronidase 3.2.1.35 from EC. The venom of Apis mellifera (Honeybee) contains several biologically-active peptides and two enzymes, one of which is a hyaluronidase []. The amino acid sequence of bee venom hyaluronidase contains 349 amino acids, and includes four cysteines and a number of potential glycosylation sites []. The sequence shows a high degree of similarity to PH-20, a membrane protein of mammalian sperm involved in sperm-egg adhesion, supporting the view that hyaluronidases play a role in fertilisation []. PH-20 is required for sperm adhesion to the egg zona pellucida; it is located on both the sperm plasma membrane and acrosomal membrane []. The amino acid sequence of the mature protein contains 468 amino acids, and includes six potential N-linked glycosylation sites and twelve cysteines, eight of which are tightly clustered near the C terminus [].; GO: 0004415 hyalurononglucosaminidase activity, 0005975 carbohydrate metabolic process; PDB: 1FCQ_A 1FCV_A 1FCU_A 2J88_A 2PE4_A 2ATM_A.

>PF02931 Neur_chan_LBD: Neurotransmitter-gated ion-channel ligand binding domain ion channel family signature gamma-aminobutyric acid (GABA) receptor signature nicotinic acetylcholine receptor signature; InterPro: IPR006202 Neurotransmitter ligand-gated ion channels are transmembrane receptor-ion channel complexes that open transiently upon binding of specific ligands, allowing rapid transmission of signals at chemical synapses [, ]

Back alignment and domain information

>TIGR00860 LIC Cation transporter family protein	Back alignment and domain information

>KOG3643\|consensus	Back alignment and domain information

>KOG3642\|consensus	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		563
1fcq_A		350	Crystal Structure (Monoclinic) Of Bee Venom Hyaluro		1e-79
2atm_A		331	Crystal Structure Of The Recombinant Allergen Ves V		1e-70
2pe4_A		424	Structure Of Human Hyaluronidase 1, A Hyaluronan Hy		4e-36

>pdb|1FCQ|A Chain A, Crystal Structure (Monoclinic) Of Bee Venom Hyaluronidase Length = 350

Back alignment and structure

Iteration: 1

Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 155/389 (39%), Positives = 217/389 (55%), Gaps = 46/389 (11%) Query: 60 PENAVPKEQFHVYWNVPTFQCHQYGLNFSEV-RRWGIIENENGNFRGNEIALLYDPGVFP 118 P+N +F+VYWNVPTF CH+YGL F EV ++GI++N FRG EIA+LYDPG+FP Sbjct: 2 PDNNKTVREFNVYWNVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMFP 61 Query: 119 ALLRAGGGDFVKRNGGVPQEGDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTA 178 ALL+ G+ V RNGGVPQ G+LT+H+Q H++ + IPD +F G Sbjct: 62 ALLKDPNGNVVARNGGVPQLGNLTKHLQVFRDHLINQ-IPDKSFPG-------------- 106 Query: 179 KFKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGRHPLWTYSAVNQE 238 +G+IDFE WRP+F +N+ SL Y+KLS + R HP W V QE Sbjct: 107 --------------VGVIDFESWRPIFRQNWASLQPYKKLSVEVVRREHPFWDDQRVEQE 152 Query: 239 ASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVRDNNDRN 298 A RFE+ + FM +L +++RP A WGYY +P C+N TP QC + ND+ Sbjct: 153 AKRRFEKYGQLFMEETLKAAKRMRPAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKM 212 Query: 299 HWLFSASTSLYPSLYVKQANMTEFDRMRFMQGRLDETNRIKAGKPVYPFIWLQSDSSELY 358 WLF + L PS+Y++ N+T +R+ + GR+ E RI Q +S Sbjct: 213 SWLFESEDVLLPSVYLRW-NLTSGERVGLVGGRVKEALRIAR----------QMTTSRKK 261 Query: 359 VCTFIWFKYFDNKDF-LKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYLH 417 V + W+KY D +D L +D+ L +G +G IIWGSS D+NT+ KC YL+ Sbjct: 262 VLPYYWYKYQDRRDTDLSRADLEATLRKITDLGADGFIIWGSSDDINTKAKCLQFREYLN 321 Query: 418 NTLGPAVKTV----RRTPKMYLDDSIDNI 442 N LGPAVK + ++ +D S+D + Sbjct: 322 NELGPAVKRIALNNNANDRLTVDVSVDQV 350

PyMOL of 1fcq

>pdb|2ATM|A Chain A, Crystal Structure Of The Recombinant Allergen Ves V 2 Length = 331

Back alignment and structure

>pdb|2PE4|A Chain A, Structure Of Human Hyaluronidase 1, A Hyaluronan Hydrolyzing Enzyme Involved In Tumor Growth And Angiogenesis Length = 424

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		563
1fcq_A		350	Hyaluronoglucosaminidase; 7-stranded (beta/alpha)	1e-114
2atm_A		331	Hyaluronoglucosaminidase; beta-alpha-barrels, hydr	1e-114
2pe4_A		424	Hyaluronidase-1; hyaluronan, EGF-like domain, hydr	1e-104
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
3rqw_A		322	ELIC pentameric ligand gated ION channel from ERW	1e-05
3rhw_A		347	Avermectin-sensitive glutamate-gated chloride CHA	4e-05
3igq_A		201	GLR4197 protein; plgic Cys-loop, membrane protein,	2e-04
3tlw_A		321	GLR4197 protein, GLIC; Cys-loop receptor family, m	2e-04

>1fcq_A Hyaluronoglucosaminidase; 7-stranded (beta/alpha) TIM barrel, glycosidase family 56, allergen, hydrolase; 1.60A {Apis mellifera} SCOP: c.1.8.9 PDB: 1fcu_A 1fcv_A* 2j88_A Length = 350	Back alignment and structure

 Score =  342 bits (878), Expect = e-114
 Identities = 152/375 (40%), Positives = 208/375 (55%), Gaps = 42/375 (11%)

Query: 60  PENAVPKEQFHVYWNVPTFQCHQYGLNFSEV-RRWGIIENENGNFRGNEIALLYDPGVFP 118
           P+N     +F+VYWNVPTF CH+YGL F EV  ++GI++N    FRG EIA+LYDPG+FP
Sbjct: 2   PDNNKTVREFNVYWNVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMFP 61

Query: 119 ALLRAGGGDFVKRNGGVPQEGDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTA 178
           ALL+   G+ V RNGGVPQ G+LT+H+Q    H++   IPD +F G              
Sbjct: 62  ALLKDPNGNVVARNGGVPQLGNLTKHLQVFRDHLI-NQIPDKSFPG-------------- 106

Query: 179 KFKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGRHPLWTYSAVNQE 238
                         +G+IDFE WRP+F +N+ SL  Y+KLS  + R  HP W    V QE
Sbjct: 107 --------------VGVIDFESWRPIFRQNWASLQPYKKLSVEVVRREHPFWDDQRVEQE 152

Query: 239 ASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVRDNNDRN 298
           A  RFE+  + FM  +L   +++RP A WGYY +P C+N TP     QC  +    ND+ 
Sbjct: 153 AKRRFEKYGQLFMEETLKAAKRMRPAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKM 212

Query: 299 HWLFSASTSLYPSLYVKQANMTEFDRMRFMQGRLDETNRIKAGKPVYPFIWLQSDSSELY 358
            WLF +   L PS+Y++  N+T  +R+  + GR+ E  RI            Q  +S   
Sbjct: 213 SWLFESEDVLLPSVYLRW-NLTSGERVGLVGGRVKEALRIAR----------QMTTSRKK 261

Query: 359 VCTFIWFKYFDNKD-FLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYLH 417
           V  + W+KY D +D  L  +D+   L     +G +G IIWGSS D+NT+ KC     YL+
Sbjct: 262 VLPYYWYKYQDRRDTDLSRADLEATLRKITDLGADGFIIWGSSDDINTKAKCLQFREYLN 321

Query: 418 NTLGPAVKTVRRTPK 432
           N LGPAVK +     
Sbjct: 322 NELGPAVKRIALNNN 336

PyMOL of 1fcq

>2atm_A Hyaluronoglucosaminidase; beta-alpha-barrels, hydrolase; HET: MES; 2.00A {Vespula vulgaris} Length = 331	Back alignment and structure

>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens} Length = 424	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3rqw_A ELIC pentameric ligand gated ION channel from ERW chrysanthemi; membrane, transport protein; HET: ACH MES; 2.91A {Dickeya dadantii} PDB: 3rqu_A* 3uq4_A 3uq5_A 3uq7_A 2vl0_A 2yks_A Length = 322	Back alignment and structure

>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A* Length = 347	Back alignment and structure

>3igq_A GLR4197 protein; plgic Cys-loop, membrane protein, transport protein; 2.30A {Gloeobacter violaceus} Length = 201	Back alignment and structure

>3tlw_A GLR4197 protein, GLIC; Cys-loop receptor family, membrane protein, transport protei; HET: LMT; 2.60A {Gloeobacter violaceus} PDB: 3uu4_A* 3uub_A* 3tlv_A* 3uu6_A* 3uu5_A* 3uu3_A* 3tlu_A* 3uu8_A* 3tls_A* 3tlt_A* 3p4w_A* 3p50_A* 3eam_A* 3ehz_A 2xq4_A 2xq5_A 2xq6_A 2xq3_A 2xq8_A 2xqa_A ... Length = 321	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		563
1fcq_A		350	Hyaluronoglucosaminidase; 7-stranded (beta/alpha)	100.0
2atm_A		331	Hyaluronoglucosaminidase; beta-alpha-barrels, hydr	100.0
2pe4_A		424	Hyaluronidase-1; hyaluronan, EGF-like domain, hydr	100.0
2qc1_B		212	Acetylcholine receptor subunit alpha; nicotinic ac	94.46
3sq6_A		204	ACHBP, neuronal acetylcholine receptor subunit alp	94.11
3tlw_A		321	GLR4197 protein, GLIC; Cys-loop receptor family, m	93.98
3rqw_A		322	ELIC pentameric ligand gated ION channel from ERW	93.42
2bg9_A		370	Acetylcholine receptor protein, alpha chain; ION c	93.27
2bg9_E		370	Acetylcholine receptor protein, gamma chain; ION c	93.2
2bg9_B		370	Acetylcholine receptor protein, beta chain; ION ch	92.52
3igq_A		201	GLR4197 protein; plgic Cys-loop, membrane protein,	92.41
2bg9_C		369	Acetylcholine receptor protein, delta chain; ION c	92.38
4aq5_E		488	Acetylcholine receptor gamma subunit; membrane pro	92.31
4aq5_A		461	Acetylcholine receptor subunit alpha; membrane pro	91.74
4aq5_C		522	Acetylcholine receptor delta subunit; membrane pro	91.5
4aod_A		205	Acetylcholine-binding protein type 1; ligand gated	91.33
4aq5_B		493	Acetylcholine receptor beta subunit; membrane prot	91.27
3rhw_A		347	Avermectin-sensitive glutamate-gated chloride CHA	89.95
4aoe_A		205	Acetylcholine-binding protein type 2; ligand gated	88.64
2bj0_A		203	Acetylcholine-binding protein; 3D-structure, glyco	80.48

>1fcq_A Hyaluronoglucosaminidase; 7-stranded (beta/alpha) TIM barrel, glycosidase family 56, allergen, hydrolase; 1.60A {Apis mellifera} SCOP: c.1.8.9 PDB: 1fcu_A 1fcv_A* 2j88_A	Back alignment and structure

Probab=100.00  E-value=8.7e-137  Score=1039.72  Aligned_cols=337  Identities=46%  Similarity=0.917  Sum_probs=299.5

Q ss_pred             CCCCCCCCceEEEeecCccccccCCCccccccc-ceeEeCCCCcccCCcEEEEeCCCCCceEecCCCCccccccCCCCCC
Q psy11740         60 PENAVPKEQFHVYWNVPTFQCHQYGLNFSEVRR-WGIIENENGNFRGNEIALLYDPGVFPALLRAGGGDFVKRNGGVPQE  138 (563)
Q Consensus        60 p~~~~~~~pF~v~WNVPT~~C~k~gv~~~~L~~-fgIv~N~~~~FrGq~ItIFY~~GlyPyi~~~~~G~~~~vNGGlPQ~  138 (563)
                      |.|+++++||.|+|||||++|+++++++.+|+. |+|++||+++|+||+|||||++|+||||.+.++|+++++||||||+
T Consensus         2 ~~p~~~~~pF~v~WN~PT~~C~~~~~~~~dl~~~f~Iv~N~~~~f~G~~itIfY~~G~yP~~~~~~~g~~~~~NGGiPQ~   81 (350)
T 1fcq_A            2 PDNNKTVREFNVYWNVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMFPALLKDPNGNVVARNGGVPQL   81 (350)
T ss_dssp             --------CCEEEEESCGGGGGGGTCCCTHHHHTTCCBCCGGGCSSSSSEEEEESCSCCCEEC-------CEETTSSGGG
T ss_pred             CCCcCCCCCeEEEEcCCHHHhcccCCcccchhcccCeEeCccccccCCeEEEEeCCCCCceeecCCCCCEeecCCCcCCC
Confidence            357899999999999999999999999978998 9999999999999999999999999999965578775569999999


Q ss_pred             CCHHHHHHHHHhhhccCcccCCCCCCCcchhhhhhhhhhhhhhhhhhhccccceeEEEEccccccccccccCChHHHHHH
Q psy11740        139 GDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTAKFKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKL  218 (563)
Q Consensus       139 gnLt~HL~ka~~DI~~~~IPd~~F~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~LaVIDwE~WRPvw~rNWgsk~iYR~~  218 (563)
                      |||++||+|+++||. ++||+++|+|                            |||||||+|||+|+||||+|+|||++
T Consensus        82 ~~L~~HL~k~~~dI~-~~IP~~~f~G----------------------------LaVIDwE~WRP~w~rNW~~k~iYr~~  132 (350)
T 1fcq_A           82 GNLTKHLQVFRDHLI-NQIPDKSFPG----------------------------VGVIDFESWRPIFRQNWASLQPYKKL  132 (350)
T ss_dssp             CCHHHHHHHHHHHHH-HHCCCTTCCS----------------------------EEEEECCSCCSSGGGCCGGGHHHHHH
T ss_pred             CCHHHHHHHHHHHHH-HhCCCCCCCc----------------------------eEEEEccccCccHhhcccccHHHHHH
Confidence            999999999999999 9999999999                            99999999999999999999999999


Q ss_pred             HHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceeeccCCccCCCCCCCCCCCCCccccccCCcc
Q psy11740        219 SRRIERGRHPLWTYSAVNQEASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVRDNNDRN  298 (563)
Q Consensus       219 S~~Lvr~~hP~ws~~~v~~~Ak~eFE~AAK~FM~eTL~LgK~LRP~alWGYYgFP~CyNy~~~~~tg~Cp~~~~~~ND~L  298 (563)
                      |++|||++||+||+++++++|+++||+|||+||+|||+|||+|||+|+||||+||+|||++++++||+||+.++.|||+|
T Consensus       133 S~~Lv~~~hp~ws~~~v~~~A~~~FE~aAr~FM~eTLkl~k~lRP~~lWGyY~fP~CyN~~~~~~tg~Cp~~~~~~Nd~L  212 (350)
T 1fcq_A          133 SVEVVRREHPFWDDQRVEQEAKRRFEKYGQLFMEETLKAAKRMRPAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKM  212 (350)
T ss_dssp             HHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEBTCSCCCTTSSSCCSSSCCHHHHHHHHTC
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCCcccCCCCCcCCCCCCHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccCCcccccchhhhhhhhhhhcc-----CCCCeeeEeecccCCccceeeeeeeeeecCCCC-
Q psy11740        299 HWLFSASTSLYPSLYVKQANMTEFDRMRFMQGRLDETNRIK-----AGKPVYPFIWLQSDSSELYVCTFIWFKYFDNKD-  372 (563)
Q Consensus       299 ~WLW~eSTALYPSIYL~~~~l~~~~~~~fVr~RV~EA~RVa-----~~~PVypY~~~~~~~~~~y~~~f~r~~Y~d~~~-  372 (563)
                      +|||++||||||||||+ ..++++.+.+||++||+||+|||     .++|||||+               |++|+|+.+ 
T Consensus       213 ~WLw~~StaLyPSIYL~-~~l~~s~~~~fV~~Rv~EA~Rva~~~~~~~~PV~~Y~---------------r~~Y~d~~~~  276 (350)
T 1fcq_A          213 SWLFESEDVLLPSVYLR-WNLTSGERVGLVGGRVKEALRIARQMTTSRKKVLPYY---------------WYKYQDRRDT  276 (350)
T ss_dssp             HHHHTTCSEEBCBCCCC-SSSCHHHHHHHHHHHHHHHHHHHHHCSSCCCEECCEE---------------ESEETTEEEE
T ss_pred             hhhhhhcCcccceeecc-cccCCcccchhHHHHHHHHHHHHhhcCCCCCceEEeE---------------eeEecCCccc
Confidence            99999999999999999 88888888899999999999998     357899999               999997665 


Q ss_pred             CCchhHHHHHhhhhhhcCCCeEEEecCCCCCCcHHHhHHHHHhhhcchhhHHHHhhccchhh----hcccccc
Q psy11740        373 FLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYLHNTLGPAVKTVRRTPKMY----LDDSIDN  441 (563)
Q Consensus       373 fLsq~DL~nTIgesaalGa~GVVIWGss~d~~S~~~C~~L~~Yl~~tLGPyI~nVt~aakl~----lD~~~~n  441 (563)
                      ||||+||+|||||+|++||+||||||||++++|+++|++|++||+++|||||+|||+||++|    .|.++|+
T Consensus       277 fLS~~DL~~TigesaalGa~GiViWGss~~~~s~~~C~~l~~Yl~~~LgPyi~nVt~aa~~~~~~~~~~~~~~  349 (350)
T 1fcq_A          277 DLSRADLEATLRKITDLGADGFIIWGSSDDINTKAKCLQFREYLNNELGPAVKRIALNNNANDRLTVDVSVDQ  349 (350)
T ss_dssp             ECCHHHHHHHHHHHHHTTCSEEEEECCGGGSSSHHHHHHHHHHHHHTHHHHHHC-------------------
T ss_pred             cccHHHHHHHHHHHHHcCCCeEEEecccccccCHHHHHHHHHHHHhcchHHHHHHHHHHHhhcceeeeeeccc
Confidence            99999999999999999999999999999999999999999999999999999999999999    5666665

PyMOL of 1fcq

>2atm_A Hyaluronoglucosaminidase; beta-alpha-barrels, hydrolase; HET: MES; 2.00A {Vespula vulgaris}	Back alignment and structure

>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}	Back alignment and structure

>2qc1_B Acetylcholine receptor subunit alpha; nicotinic acetylcholine receptor, glycosylated protein, beta sandwich, Cys-loop, buried hydrophilic residues; HET: NAG MAN; 1.94A {Mus musculus} PDB: 1l4w_B 1ljz_B	Back alignment and structure

>3sq6_A ACHBP, neuronal acetylcholine receptor subunit alpha-7, acetylcholine-binding protein; nicotinic receptor; HET: EPJ NAG; 2.80A {Homo sapiens} SCOP: b.96.1.1 PDB: 3sq9_A*	Back alignment and structure

>3tlw_A GLR4197 protein, GLIC; Cys-loop receptor family, membrane protein, transport protei; HET: LMT; 2.60A {Gloeobacter violaceus} PDB: 3uu4_A* 3uub_A* 3tlv_A* 3uu6_A* 3uu5_A* 3uu3_A* 3tlu_A* 3uu8_A* 3tls_A* 3tlt_A* 3p4w_A* 3p50_A* 3eam_A* 4f8h_A* 2xq4_A 2xq5_A 2xq6_A 2xq3_A 2xq8_A 2xqa_A ...	Back alignment and structure

>3rqw_A ELIC pentameric ligand gated ION channel from ERW chrysanthemi; membrane, transport protein; HET: ACH MES; 2.91A {Dickeya dadantii} PDB: 2yn6_A* 3rqu_A* 3uq4_A 3uq5_A 3uq7_A 2vl0_A 2yks_A 4a97_A* 4a96_A* 2yoe_A* 4a98_A*	Back alignment and structure

>2bg9_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}	Back alignment and structure

>2bg9_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}	Back alignment and structure

>2bg9_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}	Back alignment and structure

>3igq_A GLR4197 protein; plgic Cys-loop, membrane protein, transport protein; 2.30A {Gloeobacter violaceus}	Back alignment and structure

>2bg9_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}	Back alignment and structure

>4aq5_E Acetylcholine receptor gamma subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_E	Back alignment and structure

>4aq5_A Acetylcholine receptor subunit alpha; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_A	Back alignment and structure

>4aq5_C Acetylcholine receptor delta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_C	Back alignment and structure

>4aod_A Acetylcholine-binding protein type 1; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholine receptor; 6.00A {Biomphalaria glabrata}	Back alignment and structure

>4aq5_B Acetylcholine receptor beta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_B	Back alignment and structure

>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*	Back alignment and structure

>4aoe_A Acetylcholine-binding protein type 2; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholin receptor; 5.80A {Biomphalaria glabrata}	Back alignment and structure

>2bj0_A Acetylcholine-binding protein; 3D-structure, glycoprotein, glycprotein, IGG fold, immunoglobulin domain, pentamer, signal; HET: CXS; 2.0A {Bulinus truncatus}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		563
d1fcqa_		321	c.1.8.9 (A:) Bee venom hyaluronidase {Honeybee (Ap	1e-111

>d1fcqa_ c.1.8.9 (A:) Bee venom hyaluronidase {Honeybee (Apis mellifera) [TaxId: 7460]} Length = 321	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Bee venom hyaluronidase
domain: Bee venom hyaluronidase
species: Honeybee (Apis mellifera) [TaxId: 7460]

 Score =  332 bits (854), Expect = e-111
 Identities = 149/360 (41%), Positives = 202/360 (56%), Gaps = 42/360 (11%)

Query: 68  QFHVYWNVPTFQCHQYGLNFSEVRR-WGIIENENGNFRGNEIALLYDPGVFPALLRAGGG 126
           +F+VYWNVPTF CH+YGL F EV   +GI++N    FRG EIA+LYDPG+FPALL+   G
Sbjct: 1   EFNVYWNVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMFPALLKDPNG 60

Query: 127 DFVKRNGGVPQEGDLTQHMQTLEAHVVGKLIPDPAFSGELYFISFIDHQLTAKFKSVRAR 186
           + V RNGGVPQ G+LT+H+Q    H++   IPD +F G                      
Sbjct: 61  NVVARNGGVPQLGNLTKHLQVFRDHLI-NQIPDKSFPG---------------------- 97

Query: 187 VSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGRHPLWTYSAVNQEASVRFEQA 246
                 +G+IDFE WRP+F +N+ SL  Y+KLS  + R  HP W    V QEA  RFE+ 
Sbjct: 98  ------VGVIDFESWRPIFRQNWASLQPYKKLSVEVVRREHPFWDDQRVEQEAKRRFEKY 151

Query: 247 AKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVRDNNDRNHWLFSAST 306
            + FM  +L   +++RP A WGYY +P C+N TP     QC  +    ND+  WLF +  
Sbjct: 152 GQLFMEETLKAAKRMRPAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFESED 211

Query: 307 SLYPSLYVKQANMTEFDRMRFMQGRLDETNRIKAGKPVYPFIWLQSDSSELYVCTFIWFK 366
            L PS+Y++  N+T  +R+  + GR+ E  RI               +S   V  + W+K
Sbjct: 212 VLLPSVYLRW-NLTSGERVGLVGGRVKEALRIARQ----------MTTSRKKVLPYYWYK 260

Query: 367 YFDNKD-FLKDSDMINALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYLHNTLGPAVK 425
           Y D +D  L  +D+   L     +G +G IIWGSS D+NT+ KC     YL+N LGPAVK
Sbjct: 261 YQDRRDTDLSRADLEATLRKITDLGADGFIIWGSSDDINTKAKCLQFREYLNNELGPAVK 320

PyMOL of d1fcqa_

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		563
d1fcqa_		321	Bee venom hyaluronidase {Honeybee (Apis mellifera)	100.0
d1uw6a_		208	Acetylcholine binding protein (ACHBP) {Great pond	89.6

>d1fcqa_ c.1.8.9 (A:) Bee venom hyaluronidase {Honeybee (Apis mellifera) [TaxId: 7460]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Bee venom hyaluronidase
domain: Bee venom hyaluronidase
species: Honeybee (Apis mellifera) [TaxId: 7460]

Probab=100.00  E-value=2.5e-132  Score=996.14  Aligned_cols=313  Identities=47%  Similarity=0.955  Sum_probs=295.8

Q ss_pred             ceEEEeecCccccccCCCcccc-cccceeEeCCCCcccCCcEEEEeCCCCCceEecCCCCccccccCCCCCCCCHHHHHH
Q psy11740         68 QFHVYWNVPTFQCHQYGLNFSE-VRRWGIIENENGNFRGNEIALLYDPGVFPALLRAGGGDFVKRNGGVPQEGDLTQHMQ  146 (563)
Q Consensus        68 pF~v~WNVPT~~C~k~gv~~~~-L~~fgIv~N~~~~FrGq~ItIFY~~GlyPyi~~~~~G~~~~vNGGlPQ~gnLt~HL~  146 (563)
                      .|.++|||||++|++||+++++ |+.|+||+||+++|+||+|||||++|+|||+...++|+.+++||||||+|||++||+
T Consensus         1 ~F~v~WN~PT~~C~~~~~~~~~~l~~F~Iv~n~~~~f~Gq~itIFY~~G~yP~~~~~~~~~~~~~NGGlPQ~~sL~~HL~   80 (321)
T d1fcqa_           1 EFNVYWNVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMFPALLKDPNGNVVARNGGVPQLGNLTKHLQ   80 (321)
T ss_dssp             CCEEEEESCGGGGGGGTCCCTHHHHTTCCBCCGGGCSSSSSEEEEESCSCCCEEC-------CEETTSSGGGCCHHHHHH
T ss_pred             CcEEEecCCHHHHhhCCCCCCCcchhcceeeCCCCcccCCeEEEEeCCCCCcceEeCCCCceeeecCCCCCcccHHHHHH
Confidence            3999999999999999999853 689999999999999999999999999999987667777779999999999999999


Q ss_pred             HHHhhhccCcccCCCCCCCcchhhhhhhhhhhhhhhhhhhccccceeEEEEccccccccccccCChHHHHHHHHHHHHhh
Q psy11740        147 TLEAHVVGKLIPDPAFSGELYFISFIDHQLTAKFKSVRARVSLSTRLGIIDFEHWRPVFEENFGSLDEYRKLSRRIERGR  226 (563)
Q Consensus       147 ka~~DI~~~~IPd~~F~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~LaVIDwE~WRPvw~rNWgsk~iYR~~S~~Lvr~~  226 (563)
                      |+++||. ++||+++|+|                            |||||||+|||+|+||||+|+|||++|++|||++
T Consensus        81 k~~~dI~-~~ip~~~f~G----------------------------LaVIDwE~WRP~w~rNW~~k~iYr~~S~elv~~~  131 (321)
T d1fcqa_          81 VFRDHLI-NQIPDKSFPG----------------------------VGVIDFESWRPIFRQNWASLQPYKKLSVEVVRRE  131 (321)
T ss_dssp             HHHHHHH-HHCCCTTCCS----------------------------EEEEECCSCCSSGGGCCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HhCCCCCCCc----------------------------cEEEeccccccchhhcccccHHHHHHHHHHHHHH
Confidence            9999999 9999999999                            9999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceeeccCCccCCCCCCCCCCCCCccccccCCcccccccccc
Q psy11740        227 HPLWTYSAVNQEASVRFEQAAKDFMFSSLVLLRKLRPKAKWGYYGFPLCFNYTPRNQKPQCTPSVRDNNDRNHWLFSAST  306 (563)
Q Consensus       227 hP~ws~~~v~~~Ak~eFE~AAK~FM~eTL~LgK~LRP~alWGYYgFP~CyNy~~~~~tg~Cp~~~~~~ND~L~WLW~eST  306 (563)
                      ||+|++++|+++|+++||+|||+||++||+|||+|||+|+||||+||||||++++++||+||+.+++|||+|.|||++||
T Consensus       132 hp~w~~~~v~~~Ak~~FE~aak~FM~eTL~L~k~lRP~~lWGyYlfPdCyN~~~~~ytg~Cp~~e~~rNd~L~WLw~~St  211 (321)
T d1fcqa_         132 HPFWDDQRVEQEAKRRFEKYGQLFMEETLKAAKRMRPAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFESED  211 (321)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEBTCSCCCTTSSSCCSSSCCHHHHHHHHTCHHHHTTCS
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccccccccccCCCCCCCCCCChHHHhhccchhhhhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccCCcccccchhhhhhhhhhhcc-----CCCCeeeEeecccCCccceeeeeeeeeecCCC-CCCchhHHH
Q psy11740        307 SLYPSLYVKQANMTEFDRMRFMQGRLDETNRIK-----AGKPVYPFIWLQSDSSELYVCTFIWFKYFDNK-DFLKDSDMI  380 (563)
Q Consensus       307 ALYPSIYL~~~~l~~~~~~~fVr~RV~EA~RVa-----~~~PVypY~~~~~~~~~~y~~~f~r~~Y~d~~-~fLsq~DL~  380 (563)
                      ||||||||+ ..++++++.+|||+||+||+|||     ...|||||+               |++|+|.. .||||+||+
T Consensus       212 ALyPSIYL~-~~l~~s~~~~fVr~Rv~EA~RVa~~~~~~~~pv~py~---------------~~~y~d~~~~~Ls~~DL~  275 (321)
T d1fcqa_         212 VLLPSVYLR-WNLTSGERVGLVGGRVKEALRIARQMTTSRKKVLPYY---------------WYKYQDRRDTDLSRADLE  275 (321)
T ss_dssp             EEBCBCCCC-SSSCHHHHHHHHHHHHHHHHHHHHHCSSCCCEECCEE---------------ESEETTEEEEECCHHHHH
T ss_pred             ccceeeeec-cccCCchhHHHHHHHHHHHHHHHhhccCCCCCceeEE---------------EEEecCCcccccCHHHHH
Confidence            999999999 78888888899999999999999     346899999               99998854 599999999


Q ss_pred             HHhhhhhhcCCCeEEEecCCCCCCcHHHhHHHHHhhhcchhhHHH
Q psy11740        381 NALIIPKKMGTNGVIIWGSSHDVNTERKCRSLLNYLHNTLGPAVK  425 (563)
Q Consensus       381 nTIgesaalGa~GVVIWGss~d~~S~~~C~~L~~Yl~~tLGPyI~  425 (563)
                      ||||||||+||+||||||++++++|+++|++|++||+++|||||+
T Consensus       276 ~TIgesaalGaaGvViWG~~~~~~s~~~C~~l~~Yl~~~LGPyi~  320 (321)
T d1fcqa_         276 ATLRKITDLGADGFIIWGSSDDINTKAKCLQFREYLNNELGPAVK  320 (321)
T ss_dssp             HHHHHHHHTTCSEEEEECCGGGSSSHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHcCCCEEEEecCchhccCHHHHHHHHHHHhhcchhhhc
Confidence            999999999999999999999999999999999999999999986

PyMOL of d1fcqa_

>d1uw6a_ b.96.1.1 (A:) Acetylcholine binding protein (ACHBP) {Great pond snail (Lymnaea stagnalis) [TaxId: 6523]}	Back information, alignment and structure