Psyllid ID: psy11770
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 668 | 2.2.26 [Sep-21-2011] | |||||||
| P11505 | 1258 | Plasma membrane calcium-t | yes | N/A | 0.962 | 0.511 | 0.694 | 0.0 | |
| Q16720 | 1220 | Plasma membrane calcium-t | yes | N/A | 0.970 | 0.531 | 0.686 | 0.0 | |
| Q64568 | 1258 | Plasma membrane calcium-t | no | N/A | 0.962 | 0.511 | 0.685 | 0.0 | |
| P11506 | 1243 | Plasma membrane calcium-t | no | N/A | 0.968 | 0.520 | 0.684 | 0.0 | |
| Q9R0K7 | 1198 | Plasma membrane calcium-t | no | N/A | 0.968 | 0.540 | 0.684 | 0.0 | |
| Q01814 | 1243 | Plasma membrane calcium-t | no | N/A | 0.968 | 0.520 | 0.682 | 0.0 | |
| P20020 | 1258 | Plasma membrane calcium-t | no | N/A | 0.962 | 0.511 | 0.694 | 0.0 | |
| P23220 | 1220 | Plasma membrane calcium-t | no | N/A | 0.962 | 0.527 | 0.695 | 0.0 | |
| P58165 | 1112 | Plasma membrane calcium-t | N/A | N/A | 0.977 | 0.587 | 0.672 | 0.0 | |
| Q64542 | 1203 | Plasma membrane calcium-t | no | N/A | 0.959 | 0.532 | 0.687 | 0.0 |
| >sp|P11505|AT2B1_RAT Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus GN=Atp2b1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/657 (69%), Positives = 542/657 (82%), Gaps = 14/657 (2%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 357 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 416
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 417 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 476
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK +P+ E IP +I S +V GISVN YTSKI+ PE
Sbjct: 477 TGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 536
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLGF++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G +
Sbjct: 537 LPRHVGNKTECALLGFLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSF 596
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 597 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 656
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E+++V+ LTC+ V+GIEDPVRPEVPEAIKKCQRAGIT+RMV
Sbjct: 657 AGEPE---------PEWDNENDVVTGLTCIAVVGIEDPVRPEVPEAIKKCQRAGITVRMV 707
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 708 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 768 SSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 827
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 828 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 887
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 888 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 947
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 948 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 1004
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q16720|AT2B3_HUMAN Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens GN=ATP2B3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/663 (68%), Positives = 539/663 (81%), Gaps = 15/663 (2%)
Query: 7 AEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----I 62
A ++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + ++ FV+E W A +
Sbjct: 350 ANAPKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFVIETFVVEGRTWLAECTPV 409
Query: 63 YFREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATA 122
Y + FV+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATA
Sbjct: 410 YVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATA 469
Query: 123 ICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAP 182
ICSDKTGTLTTNRMT VQ+Y+ + YK IP + I +V IS+NS YT+KI+ P
Sbjct: 470 ICSDKTGTLTTNRMTVVQSYLGDTHYKEIPAPSALTPKILDLLVHAISINSAYTTKILPP 529
Query: 183 ENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK 242
E LP+QVGNKTECALLGFV+ + +++Q VR+ +PE+ +VYTFNSVRKSMSTVI
Sbjct: 530 EKEGALPRQVGNKTECALLGFVLDLKRDFQPVREQIPEDKLYKVYTFNSVRKSMSTVIRM 589
Query: 243 KNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIA 301
+G +R+++KGASEI+LKKC+ I NG L F + +VR +IEPMACDGLRTI IA
Sbjct: 590 PDGGFRLFSKGASEILLKKCTNILNSNGELRGFRPRDRDDMVRKIIEPMACDGLRTICIA 649
Query: 302 YKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI 361
Y+DF + +P+WD+E+ +V LTC+ V+GIEDPVRPEVPEAI+KCQRAGI
Sbjct: 650 YRDFSAGQ----------EPDWDNENEVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGI 699
Query: 362 TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421
T+RMVTGDNINTAR+IA KCGI++PGED+L LEGKEFNRR+R+ GE++Q LDKVWP+L
Sbjct: 700 TVRMVTGDNINTARAIAAKCGIIQPGEDFLCLEGKEFNRRIRNEKGEIEQERLDKVWPKL 759
Query: 422 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481
RVLARSSP+DK+TLVKG+IDS R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVA
Sbjct: 760 RVLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVA 819
Query: 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPL 541
KEASDIILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPL
Sbjct: 820 KEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPL 879
Query: 542 KAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVI 601
KAVQMLWVNLIMDT ASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A+YQL I
Sbjct: 880 KAVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGRDKPLISRTMMKNILGHAVYQLAI 939
Query: 602 IFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEG 661
IF +LF G+ DI +GR A S P++H+TIIFNTFV+M LFNEINARKIHG+RNVF+G
Sbjct: 940 IFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDG 999
Query: 662 LFT 664
+F+
Sbjct: 1000 IFS 1002
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q64568|AT2B3_RAT Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus GN=Atp2b3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/658 (68%), Positives = 538/658 (81%), Gaps = 15/658 (2%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + ++ FV++ W A +Y + F
Sbjct: 355 KEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFVIETFVVDGRVWLAECTPVYVQYF 414
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 415 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 474
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLTTNRMT VQ+Y+ + YK IP + I +V IS+NS YT+KI+ PE
Sbjct: 475 TGTLTTNRMTVVQSYLGDTHYKEIPAPSALTPKILDLLVHAISINSAYTTKILPPEKEGA 534
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+QVGNKTECALLGF++ + +++Q VR+ +PE+ +VYTFNSVRKSMSTVI +G +
Sbjct: 535 LPRQVGNKTECALLGFILDLKRDFQPVREQIPEDQLYKVYTFNSVRKSMSTVIRMPDGGF 594
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEI+LKKC+ I NG L F + +V+ +IEPMACDGLRTI IAY+DF
Sbjct: 595 RLFSKGASEILLKKCTNILNSNGELRGFRPRDRDDMVKKIIEPMACDGLRTICIAYRDFS 654
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ +P+WD+E+ +V LTC+ V+GIEDPVRPEVPEAI+KCQRAGIT+RMV
Sbjct: 655 AIQ----------EPDWDNENEVVGDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMV 704
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IA KCGI++PGED+L LEGKEFNRR+R+ GE++Q LDKVWP+LRVLAR
Sbjct: 705 TGDNINTARAIAAKCGIIQPGEDFLCLEGKEFNRRIRNEKGEIEQERLDKVWPKLRVLAR 764
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 765 SSPTDKHTLVKGIIDSTTGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 824
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 825 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 884
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDT ASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A+YQL IIF +L
Sbjct: 885 LWVNLIMDTFASLALATEPPTESLLLRKPYGRDKPLISRTMMKNILGHAVYQLTIIFTLL 944
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFT 664
F G+ DI +GR A S P++H+TIIFNTFV+M LFNEINARKIHG+RNVF+G+F+
Sbjct: 945 FVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFS 1002
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P11506|AT2B2_RAT Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus GN=Atp2b2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/662 (68%), Positives = 535/662 (80%), Gaps = 15/662 (2%)
Query: 7 AEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEW----KAI 62
A H ++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + V FV+ + W +
Sbjct: 376 ANMHKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFTVDTFVVNKKPWLTECTPV 435
Query: 63 YFREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATA 122
Y + FV+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATA
Sbjct: 436 YVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATA 495
Query: 123 ICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAP 182
ICSDKTGTLTTNRMT VQAYV +V YK IP I +V I++NS YT+KI+ P
Sbjct: 496 ICSDKTGTLTTNRMTVVQAYVGDVHYKEIPDPSSINAKTLELLVNAIAINSAYTTKILPP 555
Query: 183 ENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK 242
E LP+QVGNKTEC LLGFV+ + ++Y+ VR +PEE +VYTFNSVRKSMSTVI
Sbjct: 556 EKEGALPRQVGNKTECGLLGFVLDLRQDYEPVRSQMPEEKLYKVYTFNSVRKSMSTVIKM 615
Query: 243 KN-GYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIA 301
+ +R+Y+KGASEI+LKKC I G F + +V+ VIEPMACDGLRTI +A
Sbjct: 616 PDESFRMYSKGASEIVLKKCCKILSGAGEPRVFRPRDRDEMVKKVIEPMACDGLRTICVA 675
Query: 302 YKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI 361
Y+DF + +P+WD+E++I++ LTC+CV+GIEDPVRPEVPEAI+KCQRAGI
Sbjct: 676 YRDFPSSP----------EPDWDNENDILNELTCICVVGIEDPVRPEVPEAIRKCQRAGI 725
Query: 362 TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421
T+RMVTGDNINTAR+IA KCGI+ PGED+L LEGKEFNRR+R+ GE++Q +DK+WP+L
Sbjct: 726 TVRMVTGDNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKL 785
Query: 422 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481
RVLARSSP+DK+TLVKG+IDS + R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVA
Sbjct: 786 RVLARSSPTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVA 845
Query: 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPL 541
KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPL
Sbjct: 846 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPL 905
Query: 542 KAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVI 601
KAVQMLWVNLIMDT ASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A+YQL +
Sbjct: 906 KAVQMLWVNLIMDTFASLALATEPPTETLLLRKPYGRNKPLISRTMMKNILGHAVYQLTL 965
Query: 602 IFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEG 661
IF +LF G+K+ I +GR A S P++H+TIIFNTFV+M LFNEINARKIHG+RNVF+G
Sbjct: 966 IFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDG 1025
Query: 662 LF 663
+F
Sbjct: 1026 IF 1027
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9R0K7|AT2B2_MOUSE Plasma membrane calcium-transporting ATPase 2 OS=Mus musculus GN=Atp2b2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/662 (68%), Positives = 535/662 (80%), Gaps = 15/662 (2%)
Query: 7 AEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEW----KAI 62
A H ++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + V FV+ + W +
Sbjct: 331 ANMHKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFTVDTFVVNKKPWLTECTPV 390
Query: 63 YFREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATA 122
Y + FV+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATA
Sbjct: 391 YVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATA 450
Query: 123 ICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAP 182
ICSDKTGTLTTNRMT VQAYV +V YK IP I +V I++NS YT+KI+ P
Sbjct: 451 ICSDKTGTLTTNRMTVVQAYVGDVHYKEIPDPSSINAKTLELLVNAIAINSAYTTKILPP 510
Query: 183 ENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK 242
E LP+QVGNKTEC LLGFV+ + ++Y+ VR +PEE +VYTFNSVRKSMSTVI
Sbjct: 511 EKEGALPRQVGNKTECGLLGFVLDLRQDYEPVRSQMPEEKLYKVYTFNSVRKSMSTVIKM 570
Query: 243 KN-GYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIA 301
+ +R+Y+KGASEI+LKKC I G F + +V+ VIEPMACDGLRTI +A
Sbjct: 571 PDESFRMYSKGASEIVLKKCCKILSGAGEARVFRPRDRDEMVKKVIEPMACDGLRTICVA 630
Query: 302 YKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI 361
Y+DF + +P+WD+E++I++ LTC+CV+GIEDPVRPEVPEAI+KCQRAGI
Sbjct: 631 YRDFPSSP----------EPDWDNENDILNELTCICVVGIEDPVRPEVPEAIRKCQRAGI 680
Query: 362 TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421
T+RMVTGDNINTAR+IA KCGI+ PGED+L LEGKEFNRR+R+ GE++Q +DK+WP+L
Sbjct: 681 TVRMVTGDNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKL 740
Query: 422 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481
RVLARSSP+DK+TLVKG+IDS + R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVA
Sbjct: 741 RVLARSSPTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVA 800
Query: 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPL 541
KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPL
Sbjct: 801 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPL 860
Query: 542 KAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVI 601
KAVQMLWVNLIMDT ASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A+YQL +
Sbjct: 861 KAVQMLWVNLIMDTFASLALATEPPTETLLLRKPYGRNKPLISRTMMKNILGHAVYQLTL 920
Query: 602 IFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEG 661
IF +LF G+K+ I +GR A S P++H+TIIFNTFV+M LFNEINARKIHG+RNVF+G
Sbjct: 921 IFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDG 980
Query: 662 LF 663
+F
Sbjct: 981 IF 982
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Plays a role in maintaining balance and hearing. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q01814|AT2B2_HUMAN Plasma membrane calcium-transporting ATPase 2 OS=Homo sapiens GN=ATP2B2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/662 (68%), Positives = 534/662 (80%), Gaps = 15/662 (2%)
Query: 7 AEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEW----KAI 62
A H ++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + V FV+ + W +
Sbjct: 376 ASMHKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFTVDTFVVNKKPWLPECTPV 435
Query: 63 YFREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATA 122
Y + FV+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATA
Sbjct: 436 YVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATA 495
Query: 123 ICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAP 182
ICSDKTGTLTTNRMT VQAYV +V YK IP I ++ I++NS YT+KI+ P
Sbjct: 496 ICSDKTGTLTTNRMTVVQAYVGDVHYKEIPDPSSINTKTMELLINAIAINSAYTTKILPP 555
Query: 183 ENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP- 241
E LP+QVGNKTEC LLGFV+ + ++Y+ VR +PEE +VYTFNSVRKSMSTVI
Sbjct: 556 EKEGALPRQVGNKTECGLLGFVLDLKQDYEPVRSQMPEEKLYKVYTFNSVRKSMSTVIKL 615
Query: 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIA 301
+R+Y+KGASEI+LKKC I G F + +V+ VIEPMACDGLRTI +A
Sbjct: 616 PDESFRMYSKGASEIVLKKCCKILNGAGEPRVFRPRDRDEMVKKVIEPMACDGLRTICVA 675
Query: 302 YKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI 361
Y+DF + +P+WD+E++I++ LTC+CV+GIEDPVRPEVPEAI+KCQRAGI
Sbjct: 676 YRDFPSSP----------EPDWDNENDILNELTCICVVGIEDPVRPEVPEAIRKCQRAGI 725
Query: 362 TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421
T+RMVTGDNINTAR+IA KCGI+ PGED+L LEGKEFNRR+R+ GE++Q +DK+WP+L
Sbjct: 726 TVRMVTGDNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKL 785
Query: 422 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481
RVLARSSP+DK+TLVKG+IDS + R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVA
Sbjct: 786 RVLARSSPTDKHTLVKGIIDSTHTEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVA 845
Query: 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPL 541
KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPL
Sbjct: 846 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPL 905
Query: 542 KAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVI 601
KAVQMLWVNLIMDT ASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A+YQL +
Sbjct: 906 KAVQMLWVNLIMDTFASLALATEPPTETLLLRKPYGRNKPLISRTMMKNILGHAVYQLAL 965
Query: 602 IFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEG 661
IF +LF G+K+ I +GR A S P++H+TIIFNTFV+M LFNEINARKIHG+RNVF+G
Sbjct: 966 IFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDG 1025
Query: 662 LF 663
+F
Sbjct: 1026 IF 1027
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P20020|AT2B1_HUMAN Plasma membrane calcium-transporting ATPase 1 OS=Homo sapiens GN=ATP2B1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/657 (69%), Positives = 541/657 (82%), Gaps = 14/657 (2%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 357 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 416
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 417 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 476
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK +P+ E IP +I S +V GISVN YTSKI+ PE
Sbjct: 477 TGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 536
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLG ++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G Y
Sbjct: 537 LPRHVGNKTECALLGLLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSY 596
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 597 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 656
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E++IV+ LTC+ V+GIEDPVRPEVP+AIKKCQRAGIT+RMV
Sbjct: 657 AGEPE---------PEWDNENDIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMV 707
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 708 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 768 SSPTDKHTLVKGIIDSTVSDQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 827
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 828 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 887
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 888 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 947
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 948 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 1004
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P23220|AT2B1_PIG Plasma membrane calcium-transporting ATPase 1 OS=Sus scrofa GN=ATP2B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/657 (69%), Positives = 541/657 (82%), Gaps = 14/657 (2%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 357 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 416
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 417 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 476
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK IP+ E IP +I S +V GISVN YTSKI+ PE
Sbjct: 477 TGTLTMNRMTVVQAYINEKHYKKIPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 536
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLG ++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G Y
Sbjct: 537 LPRHVGNKTECALLGLLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSY 596
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 597 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 656
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E++IV+ LTC+ V+GIEDPVRPEVP+AIKKCQRAGIT+RMV
Sbjct: 657 AGEPE---------PEWDNENDIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMV 707
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 708 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 768 SSPTDKHTLVKGIIDSTVSDQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 827
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 828 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 887
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 888 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 947
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 948 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 1004
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Sus scrofa (taxid: 9823) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P58165|AT2B2_OREMO Plasma membrane calcium-transporting ATPase 2 (Fragment) OS=Oreochromis mossambicus GN=atp2b2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/681 (67%), Positives = 544/681 (79%), Gaps = 28/681 (4%)
Query: 1 MKPVEVAE--KHDEK-----------KSVLQAKLTKLAIQIGYAGSTIAILTVVILISQY 47
M+P++ AE + DEK KSVLQ KLTKLA+QIG AG ++ +TV+IL+ +
Sbjct: 340 MQPLKSAEGGEADEKERKKVSAPKKEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYF 399
Query: 48 CVKKFVIEDEEW----KAIYFREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMK 103
+ FV++ W IY + FV+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMK
Sbjct: 400 AIDNFVMQKRPWMPECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMK 459
Query: 104 DNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIAS 163
DNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQ YV +V+YK IP +P
Sbjct: 460 DNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQLYVGDVRYKEIPDPGVLPPKSLD 519
Query: 164 KIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVF 223
+V IS+NS YT+KI+ P+ LPKQVGNKTEC LLG V+ + ++YQ +R+ +PEE
Sbjct: 520 LLVNAISINSAYTTKILPPDKEGGLPKQVGNKTECGLLGLVLELKRDYQPIRNQIPEEKL 579
Query: 224 TRVYTFNSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRL 282
+VYTFNSVRKSMSTVI +G +R+Y+KGASEI+LKKCS+I G F + +
Sbjct: 580 YKVYTFNSVRKSMSTVIKLPDGSFRMYSKGASEIVLKKCSHILNEVGEPRVFRPRDKDEM 639
Query: 283 VRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIE 342
V+ VIEPMACDGLRTI +AY+DF ++ +PNWDDE+NI++ LT +CV+GIE
Sbjct: 640 VKKVIEPMACDGLRTICVAYRDFSSNP----------EPNWDDENNILNDLTAICVVGIE 689
Query: 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRV 402
DPVRPEVP AI+KCQRAGIT+RMVTG NINTAR+IA KCGI+ PGED+L ++GKEFNRR+
Sbjct: 690 DPVRPEVPNAIQKCQRAGITVRMVTGANINTARAIAIKCGIIHPGEDFLCIDGKEFNRRI 749
Query: 403 RDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGP 462
R+ GEV+Q +DKVWP+LRVLARSSP+DK+TLVKG+IDS ++ R+VVAVTGDGTNDGP
Sbjct: 750 RNEKGEVEQERIDKVWPKLRVLARSSPTDKHTLVKGIIDSTMADQRQVVAVTGDGTNDGP 809
Query: 463 ALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVN 522
ALKKADVGFAMGI GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVN
Sbjct: 810 ALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVN 869
Query: 523 VVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKAL 582
VVAVIVAF GAC QDSPLKAVQMLWVNLIMDT ASLALATE PT LL RKPYGR K L
Sbjct: 870 VVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKRKPYGRNKPL 929
Query: 583 ISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMT 642
IS TM KNI+G +YQL+IIF +LF G+++ DI +GR A S P++H+TIIFNTFV+M
Sbjct: 930 ISSTMTKNILGHGVYQLIIIFTLLFVGEQIFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQ 989
Query: 643 LFNEINARKIHGQRNVFEGLF 663
LFNEINARKIHG+RNVF+G+F
Sbjct: 990 LFNEINARKIHGERNVFDGIF 1010
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Oreochromis mossambicus (taxid: 8127) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q64542|AT2B4_RAT Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus GN=Atp2b4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/657 (68%), Positives = 534/657 (81%), Gaps = 16/657 (2%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEW----KAIYFREF 67
++KSVLQ KLT+LA+QIG AG ++ILTV+ILI + V FVI+ W +Y + F
Sbjct: 347 KEKSVLQGKLTRLAVQIGKAGLIMSILTVLILILYFVVDNFVIQRRAWLPECTPVYIQYF 406
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 407 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 466
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ Y+ IPK +D+P ++ IV I +NS YTSKI+ PE
Sbjct: 467 TGTLTMNRMTVVQAYIGGTHYRQIPKPDDLPPNVLDLIVNSICINSAYTSKILPPEKEGG 526
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGY 246
LP+QVGNKTEC LLGFV + ++YQ VR ++PEE +VYTFNSVRKSMSTVI K + G+
Sbjct: 527 LPRQVGNKTECGLLGFVTDLKQDYQAVRSEMPEEKLFKVYTFNSVRKSMSTVIRKPEGGF 586
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
RV++KGASEI+L+KC I + G + F + +VRNVIEPMA +GLRTI IAY+DF
Sbjct: 587 RVFSKGASEIMLRKCDRILNKEGGIVPFKTKDRDNMVRNVIEPMASEGLRTIGIAYRDFD 646
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ +P+W++E+ I + L C+ V+GIEDPVRPEVP+AI KC+RAGIT+RMV
Sbjct: 647 GE-----------EPSWENENEIFTGLVCIAVVGIEDPVRPEVPDAINKCKRAGITVRMV 695
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDN+NTAR+IATKCGI+ PG+D+L LEGKEFNR +R+ GEV+Q LDKVWPRLRVLAR
Sbjct: 696 TGDNVNTARAIATKCGILTPGDDFLCLEGKEFNRLIRNEKGEVEQEKLDKVWPRLRVLAR 755
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS I R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 756 SSPTDKHTLVKGIIDSNIGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 815
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 816 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFSGACITQDSPLKAVQM 875
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDT ASLALATE PT LL R+PYGR K LIS+TMMKNI+G A+YQL I+F ++
Sbjct: 876 LWVNLIMDTFASLALATEPPTDSLLRRRPYGRNKPLISRTMMKNILGHAVYQLGIVFLLV 935
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F GDKL DI +GR A S P+QH+TI+FNTFVLM LFNEIN+RKIHG++NVF G++
Sbjct: 936 FAGDKLFDIDSGRKAPLNSPPSQHYTIVFNTFVLMQLFNEINSRKIHGEKNVFAGVY 992
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 668 | ||||||
| 383859186 | 1194 | PREDICTED: plasma membrane calcium-trans | 0.973 | 0.544 | 0.820 | 0.0 | |
| 383859194 | 1199 | PREDICTED: plasma membrane calcium-trans | 0.973 | 0.542 | 0.820 | 0.0 | |
| 383859192 | 1176 | PREDICTED: plasma membrane calcium-trans | 0.973 | 0.552 | 0.820 | 0.0 | |
| 383859188 | 1172 | PREDICTED: plasma membrane calcium-trans | 0.973 | 0.554 | 0.820 | 0.0 | |
| 383859190 | 1108 | PREDICTED: plasma membrane calcium-trans | 0.973 | 0.586 | 0.820 | 0.0 | |
| 340729533 | 1193 | PREDICTED: plasma membrane calcium-trans | 0.977 | 0.547 | 0.815 | 0.0 | |
| 350411677 | 1193 | PREDICTED: plasma membrane calcium-trans | 0.977 | 0.547 | 0.813 | 0.0 | |
| 380018752 | 1189 | PREDICTED: plasma membrane calcium-trans | 0.989 | 0.555 | 0.803 | 0.0 | |
| 328783833 | 1186 | PREDICTED: plasma membrane calcium-trans | 0.989 | 0.557 | 0.802 | 0.0 | |
| 328724399 | 1218 | PREDICTED: plasma membrane calcium-trans | 0.988 | 0.541 | 0.803 | 0.0 |
| >gi|383859186|ref|XP_003705077.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1131 bits (2926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/652 (82%), Positives = 598/652 (91%), Gaps = 2/652 (0%)
Query: 15 SVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVG 74
SVLQAKLTKLAIQIGYAGSTIA+LTVVIL+ Q+CVK FVI+++ WK Y + VR I+G
Sbjct: 336 SVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIDEKPWKNTYAGDLVRHLIIG 395
Query: 75 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 134
VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN
Sbjct: 396 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 455
Query: 135 RMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGN 194
RMT VQ+Y+CE K IPK+ DIP + + IV+ IS+NS YTS+IM ++ ELP QVGN
Sbjct: 456 RMTVVQSYICEKMSKTIPKFSDIPSHVGNLIVQAISINSAYTSRIMPSQDPTELPLQVGN 515
Query: 195 KTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGA 253
KTECALLGFVVA+G NYQT+RDD PEE FTRVYTFNSVRKSMSTVIP+K G YR++TKGA
Sbjct: 516 KTECALLGFVVALGMNYQTIRDDQPEETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGA 575
Query: 254 SEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEIN 313
SEII+KKC++IYGR GHLEKFT++MQ RLV+NVIEPMACDGLRTIS+AY+DFV KAEIN
Sbjct: 576 SEIIMKKCAFIYGREGHLEKFTREMQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEIN 635
Query: 314 QVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINT 373
QVHI+ +PNWDDE NIV++LTCLC++GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINT
Sbjct: 636 QVHIDNEPNWDDEENIVNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINT 695
Query: 374 ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKY 433
ARSIA KCGI+KP ED+LILEGKEFNRR+RD+NGEVQQ+LLDKVWP+LRVLARSSP+DKY
Sbjct: 696 ARSIALKCGILKPNEDFLILEGKEFNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKY 755
Query: 434 TLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 493
TLVKG+IDSK S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDN
Sbjct: 756 TLVKGIIDSKASVSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 815
Query: 494 FSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM 553
FSSIVKAVMWGRNVYDSI+KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM
Sbjct: 816 FSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM 875
Query: 554 DTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLL 613
DTLASLALATE+PTPDLLLR+PYGRTK LIS+TMMKNI+GQA+YQL +IF +LF GDK+L
Sbjct: 876 DTLASLALATELPTPDLLLRRPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKML 935
Query: 614 DIPTGRG-AEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFT 664
DI TGRG A+ G PTQHFT+IFNTFV+MTLFNE NARKIHGQRNVF+G+FT
Sbjct: 936 DIETGRGVAQAGGGPTQHFTVIFNTFVMMTLFNEFNARKIHGQRNVFQGIFT 987
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859194|ref|XP_003705081.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 5 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/652 (82%), Positives = 598/652 (91%), Gaps = 2/652 (0%)
Query: 15 SVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVG 74
SVLQAKLTKLAIQIGYAGSTIA+LTVVIL+ Q+CVK FVI+++ WK Y + VR I+G
Sbjct: 337 SVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIDEKPWKNTYAGDLVRHLIIG 396
Query: 75 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 134
VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN
Sbjct: 397 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 456
Query: 135 RMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGN 194
RMT VQ+Y+CE K IPK+ DIP + + IV+ IS+NS YTS+IM ++ ELP QVGN
Sbjct: 457 RMTVVQSYICEKMSKTIPKFSDIPSHVGNLIVQAISINSAYTSRIMPSQDPTELPLQVGN 516
Query: 195 KTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGA 253
KTECALLGFVVA+G NYQT+RDD PEE FTRVYTFNSVRKSMSTVIP+K G YR++TKGA
Sbjct: 517 KTECALLGFVVALGMNYQTIRDDQPEETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGA 576
Query: 254 SEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEIN 313
SEII+KKC++IYGR GHLEKFT++MQ RLV+NVIEPMACDGLRTIS+AY+DFV KAEIN
Sbjct: 577 SEIIMKKCAFIYGREGHLEKFTREMQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEIN 636
Query: 314 QVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINT 373
QVHI+ +PNWDDE NIV++LTCLC++GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINT
Sbjct: 637 QVHIDNEPNWDDEENIVNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINT 696
Query: 374 ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKY 433
ARSIA KCGI+KP ED+LILEGKEFNRR+RD+NGEVQQ+LLDKVWP+LRVLARSSP+DKY
Sbjct: 697 ARSIALKCGILKPNEDFLILEGKEFNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKY 756
Query: 434 TLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 493
TLVKG+IDSK S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDN
Sbjct: 757 TLVKGIIDSKASVSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 816
Query: 494 FSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM 553
FSSIVKAVMWGRNVYDSI+KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM
Sbjct: 817 FSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM 876
Query: 554 DTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLL 613
DTLASLALATE+PTPDLLLR+PYGRTK LIS+TMMKNI+GQA+YQL +IF +LF GDK+L
Sbjct: 877 DTLASLALATELPTPDLLLRRPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKML 936
Query: 614 DIPTGRG-AEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFT 664
DI TGRG A+ G PTQHFT+IFNTFV+MTLFNE NARKIHGQRNVF+G+FT
Sbjct: 937 DIETGRGVAQAGGGPTQHFTVIFNTFVMMTLFNEFNARKIHGQRNVFQGIFT 988
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859192|ref|XP_003705080.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 4 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/652 (82%), Positives = 598/652 (91%), Gaps = 2/652 (0%)
Query: 15 SVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVG 74
SVLQAKLTKLAIQIGYAGSTIA+LTVVIL+ Q+CVK FVI+++ WK Y + VR I+G
Sbjct: 337 SVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIDEKPWKNTYAGDLVRHLIIG 396
Query: 75 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 134
VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN
Sbjct: 397 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 456
Query: 135 RMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGN 194
RMT VQ+Y+CE K IPK+ DIP + + IV+ IS+NS YTS+IM ++ ELP QVGN
Sbjct: 457 RMTVVQSYICEKMSKTIPKFSDIPSHVGNLIVQAISINSAYTSRIMPSQDPTELPLQVGN 516
Query: 195 KTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGA 253
KTECALLGFVVA+G NYQT+RDD PEE FTRVYTFNSVRKSMSTVIP+K G YR++TKGA
Sbjct: 517 KTECALLGFVVALGMNYQTIRDDQPEETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGA 576
Query: 254 SEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEIN 313
SEII+KKC++IYGR GHLEKFT++MQ RLV+NVIEPMACDGLRTIS+AY+DFV KAEIN
Sbjct: 577 SEIIMKKCAFIYGREGHLEKFTREMQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEIN 636
Query: 314 QVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINT 373
QVHI+ +PNWDDE NIV++LTCLC++GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINT
Sbjct: 637 QVHIDNEPNWDDEENIVNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINT 696
Query: 374 ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKY 433
ARSIA KCGI+KP ED+LILEGKEFNRR+RD+NGEVQQ+LLDKVWP+LRVLARSSP+DKY
Sbjct: 697 ARSIALKCGILKPNEDFLILEGKEFNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKY 756
Query: 434 TLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 493
TLVKG+IDSK S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDN
Sbjct: 757 TLVKGIIDSKASVSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 816
Query: 494 FSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM 553
FSSIVKAVMWGRNVYDSI+KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM
Sbjct: 817 FSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM 876
Query: 554 DTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLL 613
DTLASLALATE+PTPDLLLR+PYGRTK LIS+TMMKNI+GQA+YQL +IF +LF GDK+L
Sbjct: 877 DTLASLALATELPTPDLLLRRPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKML 936
Query: 614 DIPTGRG-AEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFT 664
DI TGRG A+ G PTQHFT+IFNTFV+MTLFNE NARKIHGQRNVF+G+FT
Sbjct: 937 DIETGRGVAQAGGGPTQHFTVIFNTFVMMTLFNEFNARKIHGQRNVFQGIFT 988
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859188|ref|XP_003705078.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 2 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/652 (82%), Positives = 598/652 (91%), Gaps = 2/652 (0%)
Query: 15 SVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVG 74
SVLQAKLTKLAIQIGYAGSTIA+LTVVIL+ Q+CVK FVI+++ WK Y + VR I+G
Sbjct: 337 SVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIDEKPWKNTYAGDLVRHLIIG 396
Query: 75 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 134
VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN
Sbjct: 397 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 456
Query: 135 RMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGN 194
RMT VQ+Y+CE K IPK+ DIP + + IV+ IS+NS YTS+IM ++ ELP QVGN
Sbjct: 457 RMTVVQSYICEKMSKTIPKFSDIPSHVGNLIVQAISINSAYTSRIMPSQDPTELPLQVGN 516
Query: 195 KTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGA 253
KTECALLGFVVA+G NYQT+RDD PEE FTRVYTFNSVRKSMSTVIP+K G YR++TKGA
Sbjct: 517 KTECALLGFVVALGMNYQTIRDDQPEETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGA 576
Query: 254 SEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEIN 313
SEII+KKC++IYGR GHLEKFT++MQ RLV+NVIEPMACDGLRTIS+AY+DFV KAEIN
Sbjct: 577 SEIIMKKCAFIYGREGHLEKFTREMQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEIN 636
Query: 314 QVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINT 373
QVHI+ +PNWDDE NIV++LTCLC++GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINT
Sbjct: 637 QVHIDNEPNWDDEENIVNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINT 696
Query: 374 ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKY 433
ARSIA KCGI+KP ED+LILEGKEFNRR+RD+NGEVQQ+LLDKVWP+LRVLARSSP+DKY
Sbjct: 697 ARSIALKCGILKPNEDFLILEGKEFNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKY 756
Query: 434 TLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 493
TLVKG+IDSK S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDN
Sbjct: 757 TLVKGIIDSKASVSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 816
Query: 494 FSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM 553
FSSIVKAVMWGRNVYDSI+KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM
Sbjct: 817 FSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM 876
Query: 554 DTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLL 613
DTLASLALATE+PTPDLLLR+PYGRTK LIS+TMMKNI+GQA+YQL +IF +LF GDK+L
Sbjct: 877 DTLASLALATELPTPDLLLRRPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKML 936
Query: 614 DIPTGRG-AEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFT 664
DI TGRG A+ G PTQHFT+IFNTFV+MTLFNE NARKIHGQRNVF+G+FT
Sbjct: 937 DIETGRGVAQAGGGPTQHFTVIFNTFVMMTLFNEFNARKIHGQRNVFQGIFT 988
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859190|ref|XP_003705079.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 isoform 3 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/652 (82%), Positives = 598/652 (91%), Gaps = 2/652 (0%)
Query: 15 SVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVG 74
SVLQAKLTKLAIQIGYAGSTIA+LTVVIL+ Q+CVK FVI+++ WK Y + VR I+G
Sbjct: 337 SVLQAKLTKLAIQIGYAGSTIAVLTVVILVIQFCVKTFVIDEKPWKNTYAGDLVRHLIIG 396
Query: 75 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 134
VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN
Sbjct: 397 VTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 456
Query: 135 RMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGN 194
RMT VQ+Y+CE K IPK+ DIP + + IV+ IS+NS YTS+IM ++ ELP QVGN
Sbjct: 457 RMTVVQSYICEKMSKTIPKFSDIPSHVGNLIVQAISINSAYTSRIMPSQDPTELPLQVGN 516
Query: 195 KTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYTKGA 253
KTECALLGFVVA+G NYQT+RDD PEE FTRVYTFNSVRKSMSTVIP+K G YR++TKGA
Sbjct: 517 KTECALLGFVVALGMNYQTIRDDQPEETFTRVYTFNSVRKSMSTVIPRKGGGYRLFTKGA 576
Query: 254 SEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEIN 313
SEII+KKC++IYGR GHLEKFT++MQ RLV+NVIEPMACDGLRTIS+AY+DFV KAEIN
Sbjct: 577 SEIIMKKCAFIYGREGHLEKFTREMQERLVKNVIEPMACDGLRTISVAYRDFVPGKAEIN 636
Query: 314 QVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINT 373
QVHI+ +PNWDDE NIV++LTCLC++GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDNINT
Sbjct: 637 QVHIDNEPNWDDEENIVNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDNINT 696
Query: 374 ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKY 433
ARSIA KCGI+KP ED+LILEGKEFNRR+RD+NGEVQQ+LLDKVWP+LRVLARSSP+DKY
Sbjct: 697 ARSIALKCGILKPNEDFLILEGKEFNRRIRDSNGEVQQHLLDKVWPKLRVLARSSPTDKY 756
Query: 434 TLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 493
TLVKG+IDSK S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILTDDN
Sbjct: 757 TLVKGIIDSKASVSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDN 816
Query: 494 FSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM 553
FSSIVKAVMWGRNVYDSI+KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM
Sbjct: 817 FSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIM 876
Query: 554 DTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLL 613
DTLASLALATE+PTPDLLLR+PYGRTK LIS+TMMKNI+GQA+YQL +IF +LF GDK+L
Sbjct: 877 DTLASLALATELPTPDLLLRRPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGDKML 936
Query: 614 DIPTGRG-AEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFT 664
DI TGRG A+ G PTQHFT+IFNTFV+MTLFNE NARKIHGQRNVF+G+FT
Sbjct: 937 DIETGRGVAQAGGGPTQHFTVIFNTFVMMTLFNEFNARKIHGQRNVFQGIFT 988
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340729533|ref|XP_003403055.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/655 (81%), Positives = 596/655 (90%), Gaps = 2/655 (0%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFF 71
++KSVLQAKLTKLAIQIGYAGSTIA+LTV+IL+ Q+CV FVIE + WK +Y + VR
Sbjct: 332 KEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILVIQFCVTTFVIEGKPWKNMYAGDLVRHL 391
Query: 72 IVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL 131
I+GVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL
Sbjct: 392 IIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL 451
Query: 132 TTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQ 191
TTNRMT VQ+Y+CE K +P++ +IP I + I++ I+VNS YTS+IM P+ ELP Q
Sbjct: 452 TTNRMTVVQSYICEKMSKKVPEFSEIPSHIGNLIIQAIAVNSAYTSRIMPPQEPTELPLQ 511
Query: 192 VGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYT 250
VGNKTECALLGFVVA+G NYQT+RDD PEE FTRVYTFNSVRKSMSTVIP+K G YR++T
Sbjct: 512 VGNKTECALLGFVVALGMNYQTIRDDQPEETFTRVYTFNSVRKSMSTVIPRKGGGYRLFT 571
Query: 251 KGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKA 310
KGASEII+KKC++IYGR GHLEKFT++MQ RLV+NVIEPMACDGLRTI +AY+DFV KA
Sbjct: 572 KGASEIIMKKCAFIYGREGHLEKFTREMQERLVKNVIEPMACDGLRTICVAYRDFVPGKA 631
Query: 311 EINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDN 370
EINQVHI+ DPNW+DE NIV++LTCLC++GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDN
Sbjct: 632 EINQVHIDNDPNWEDEENIVNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDN 691
Query: 371 INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 430
INTARSIA KCGI KP ED+LILEGKEFNRR+RD NGEVQQ+LLDKVWPRLRVLARSSP+
Sbjct: 692 INTARSIALKCGIFKPNEDFLILEGKEFNRRIRDANGEVQQHLLDKVWPRLRVLARSSPT 751
Query: 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 490
DKYTLVKG+IDSK S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILT
Sbjct: 752 DKYTLVKGIIDSKASVSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILT 811
Query: 491 DDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVN 550
DDNFSSIVKAVMWGRNVYDSI+KFLQFQLTVN+VAVIVAFIGACAVQDSPLKAVQMLWVN
Sbjct: 812 DDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNIVAVIVAFIGACAVQDSPLKAVQMLWVN 871
Query: 551 LIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGD 610
LIMDTLASLALATEMPT DLLLRKPYGRTK LIS+TMMKNI+GQA+YQL +IF +LF GD
Sbjct: 872 LIMDTLASLALATEMPTSDLLLRKPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGD 931
Query: 611 KLLDIPTGRG-AEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFT 664
K+LDI TGRG A+ G PTQHFTIIFNTFV+MTLFNE NARKIHGQRNVF+G+FT
Sbjct: 932 KMLDIETGRGVAQTGGGPTQHFTIIFNTFVMMTLFNEFNARKIHGQRNVFQGIFT 986
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350411677|ref|XP_003489420.1| PREDICTED: plasma membrane calcium-transporting ATPase 3-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/655 (81%), Positives = 596/655 (90%), Gaps = 2/655 (0%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFF 71
++KSVLQAKLTKLAIQIGYAGSTIA+LTV+IL+ Q+CV FVIE + WK +Y + VR
Sbjct: 332 KEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILVIQFCVTTFVIEGKPWKNMYAGDLVRHL 391
Query: 72 IVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL 131
I+GVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL
Sbjct: 392 IIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL 451
Query: 132 TTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQ 191
TTNRMT VQ+Y+CE K +P++ +IP I + I++ I+VNS YTS+IM P+ ELP Q
Sbjct: 452 TTNRMTVVQSYICEKMSKKVPEFSEIPSHIGNLIIQAIAVNSAYTSRIMPPQEPTELPLQ 511
Query: 192 VGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYT 250
VGNKTECALLGFVVA+G NYQT+RDD PEE FTRVYTFNSVRKSMSTVIP+K G YR++T
Sbjct: 512 VGNKTECALLGFVVALGMNYQTIRDDQPEETFTRVYTFNSVRKSMSTVIPRKGGGYRLFT 571
Query: 251 KGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKA 310
KGASEII+KKC++IYGR GHLEKFT++MQ RLV+NVIEPMACDGLRTI +AY+DFV KA
Sbjct: 572 KGASEIIMKKCAFIYGREGHLEKFTREMQERLVKNVIEPMACDGLRTICVAYRDFVPGKA 631
Query: 311 EINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDN 370
EINQVHI+ DPNW+DE N+V++LTCLC++GIEDPVRPEVP+AI+KCQ+AGIT+RMVTGDN
Sbjct: 632 EINQVHIDNDPNWEDEENVVNNLTCLCIVGIEDPVRPEVPDAIRKCQKAGITVRMVTGDN 691
Query: 371 INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 430
INTARSIA KCGI KP ED+LILEGKEFNRR+RD NGEVQQ+LLDKVWPRLRVLARSSP+
Sbjct: 692 INTARSIALKCGIFKPNEDFLILEGKEFNRRIRDANGEVQQHLLDKVWPRLRVLARSSPT 751
Query: 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 490
DKYTLVKG+IDSK S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDIILT
Sbjct: 752 DKYTLVKGIIDSKASVSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILT 811
Query: 491 DDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVN 550
DDNFSSIVKAVMWGRNVYDSI+KFLQFQLTVN+VAVIVAFIGACAVQDSPLKAVQMLWVN
Sbjct: 812 DDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNIVAVIVAFIGACAVQDSPLKAVQMLWVN 871
Query: 551 LIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGD 610
LIMDTLASLALATEMPT DLLLRKPYGRTK LIS+TMMKNI+GQA+YQL +IF +LF GD
Sbjct: 872 LIMDTLASLALATEMPTSDLLLRKPYGRTKPLISRTMMKNILGQAVYQLSVIFMLLFVGD 931
Query: 611 KLLDIPTGRG-AEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFT 664
K+LDI TGRG A+ G PTQHFTIIFNTFV+MTLFNE NARKIHGQRNVF+G+FT
Sbjct: 932 KMLDIETGRGVAQAGGGPTQHFTIIFNTFVMMTLFNEFNARKIHGQRNVFQGIFT 986
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380018752|ref|XP_003693287.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/663 (80%), Positives = 598/663 (90%), Gaps = 2/663 (0%)
Query: 4 VEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIY 63
V A + ++KSVLQAKLTKLAIQIGYAGSTIA+LTV+IL+ Q+CV F ++ + WK Y
Sbjct: 320 VSHAAEGKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILVIQFCVTTFYVQGKSWKNTY 379
Query: 64 FREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAI 123
+ VR I+GVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAI
Sbjct: 380 AGDLVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAI 439
Query: 124 CSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPE 183
CSDKTGTLTTNRMT VQ+Y+CE K P++ DIP + + +V+ IS+NS YTS+IM +
Sbjct: 440 CSDKTGTLTTNRMTVVQSYICEKMSKITPQFSDIPSHVGNLMVQAISINSAYTSRIMPAQ 499
Query: 184 NANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKK 243
+LP QVGNKTECALLGFV+A+G NYQT+RDD PEE FTRVYTFNSVRKSMST IP+K
Sbjct: 500 EPTDLPLQVGNKTECALLGFVIALGMNYQTIRDDQPEETFTRVYTFNSVRKSMSTAIPRK 559
Query: 244 NG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAY 302
G YR++TKGASEII+KKC++IYGR GHLEKFTK+MQ RLV+NVIEPMACDGLRTI IAY
Sbjct: 560 GGGYRLFTKGASEIIMKKCAFIYGREGHLEKFTKEMQERLVKNVIEPMACDGLRTICIAY 619
Query: 303 KDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGIT 362
+DFV KAEINQVHI+ +PNWDDE N+V++LTCLC++GIEDPVRPEVPEAI+KCQ+AGIT
Sbjct: 620 RDFVPGKAEINQVHIDNEPNWDDEENVVNNLTCLCIVGIEDPVRPEVPEAIRKCQKAGIT 679
Query: 363 IRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422
+RMVTGDNINTARSIA KCGI+KP ED+LILEGKEFNRR+RD++GEVQQ+LLDKVWPRLR
Sbjct: 680 VRMVTGDNINTARSIALKCGILKPNEDFLILEGKEFNRRIRDSSGEVQQHLLDKVWPRLR 739
Query: 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK 482
VLARSSP+DKYTLVKG+IDSK SA REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAK
Sbjct: 740 VLARSSPTDKYTLVKGIIDSKASASREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK 799
Query: 483 EASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLK 542
EASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQFQLTVN+VAVIVAFIGACAVQDSPLK
Sbjct: 800 EASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNIVAVIVAFIGACAVQDSPLK 859
Query: 543 AVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVII 602
AVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTK LIS+TMMKNI+GQAIYQL +I
Sbjct: 860 AVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISRTMMKNILGQAIYQLTVI 919
Query: 603 FGILFFGDKLLDIPTGRG-AEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEG 661
F +LF GDK+LDI TGRG A+ G PTQHFTIIFNTFV+MTLFNE NARKIHGQRNVF+G
Sbjct: 920 FMLLFVGDKMLDIETGRGVAQAGGGPTQHFTIIFNTFVMMTLFNEFNARKIHGQRNVFQG 979
Query: 662 LFT 664
+FT
Sbjct: 980 IFT 982
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328783833|ref|XP_003250350.1| PREDICTED: plasma membrane calcium-transporting ATPase 3 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/663 (80%), Positives = 597/663 (90%), Gaps = 2/663 (0%)
Query: 4 VEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIY 63
V A + ++KSVLQAKLTKLAIQIGYAGSTIA+LTV+IL+ Q+CV F ++ + WK Y
Sbjct: 317 VSHAPEGKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILVIQFCVTTFYVQGKSWKNTY 376
Query: 64 FREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAI 123
+ VR I+GVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAI
Sbjct: 377 AGDLVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAI 436
Query: 124 CSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPE 183
CSDKTGTLTTNRMT VQ+Y+CE K P++ DIP + + +V+ IS+NS YTS+IM +
Sbjct: 437 CSDKTGTLTTNRMTVVQSYICEKMSKITPQFSDIPSHVGNLMVQAISINSAYTSRIMPAQ 496
Query: 184 NANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKK 243
+LP QVGNKTECALLGFV+A+G NYQT+RDD PEE FTRVYTFNSVRKSMST IP+K
Sbjct: 497 EPTDLPLQVGNKTECALLGFVIALGMNYQTIRDDQPEETFTRVYTFNSVRKSMSTAIPRK 556
Query: 244 NG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAY 302
G YR++TKGASEII+KKC++IYGR GHLEKFTK+MQ RLV+NVIEPMACDGLRTI IAY
Sbjct: 557 GGGYRLFTKGASEIIMKKCAFIYGREGHLEKFTKEMQERLVKNVIEPMACDGLRTICIAY 616
Query: 303 KDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGIT 362
+DFV KAEINQVHI+ +PNWDDE N+V++LTCLC++GIEDPVRPEVPEAI+KCQ+AGIT
Sbjct: 617 RDFVPGKAEINQVHIDNEPNWDDEENVVNNLTCLCIVGIEDPVRPEVPEAIRKCQKAGIT 676
Query: 363 IRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422
+RMVTGDNINTARSIA KCGI+KP ED+LILEGKEFNRR+RD++GEVQQ+LLDKVWPRLR
Sbjct: 677 VRMVTGDNINTARSIALKCGILKPNEDFLILEGKEFNRRIRDSSGEVQQHLLDKVWPRLR 736
Query: 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK 482
VLARSSP+DKYTLVKG+IDSK S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAK
Sbjct: 737 VLARSSPTDKYTLVKGIIDSKASVSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK 796
Query: 483 EASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLK 542
EASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQFQLTVN+VAVIVAFIGACAVQDSPLK
Sbjct: 797 EASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNIVAVIVAFIGACAVQDSPLK 856
Query: 543 AVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVII 602
AVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTK LIS+TMMKNI+GQAIYQL +I
Sbjct: 857 AVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISRTMMKNILGQAIYQLTVI 916
Query: 603 FGILFFGDKLLDIPTGRG-AEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEG 661
F +LF GDK+LDI TGRG A+ G PTQHFTIIFNTFV+MTLFNE NARKIHGQRNVF+G
Sbjct: 917 FMLLFVGDKMLDIETGRGVAQAGGGPTQHFTIIFNTFVMMTLFNEFNARKIHGQRNVFQG 976
Query: 662 LFT 664
+FT
Sbjct: 977 IFT 979
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328724399|ref|XP_001945158.2| PREDICTED: plasma membrane calcium-transporting ATPase 3-like isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/663 (80%), Positives = 602/663 (90%), Gaps = 3/663 (0%)
Query: 5 EVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYF 64
E E + KSVLQAKLTKLAIQIGYAGSTIA+LTV+IL+ Q+C+ FVI+ ++WK Y
Sbjct: 333 ESEEPAKKDKSVLQAKLTKLAIQIGYAGSTIAVLTVLILVIQFCIHTFVIQQKQWKNHYA 392
Query: 65 REFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAIC 124
EFVR I+GVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAIC
Sbjct: 393 GEFVRHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAIC 452
Query: 125 SDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPEN 184
SDKTGTLTTNRMT VQ+Y+CEV K +P++ IP ++ + +V+ IS+NS YTSKIM P++
Sbjct: 453 SDKTGTLTTNRMTVVQSYICEVLSKTMPQFASIPSNVGNLLVQAISINSAYTSKIMPPDD 512
Query: 185 -ANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKK 243
+ELPKQVGNKTECALLGF++A+GKNYQT RDD+PEE+ TRVYTFNSVRKSMSTVIP++
Sbjct: 513 PTSELPKQVGNKTECALLGFILALGKNYQTWRDDIPEEMLTRVYTFNSVRKSMSTVIPRE 572
Query: 244 NG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAY 302
G YR++TKGASEI+LKKCSYIYGR+G LEKFT++MQ RLVRNVIEPMA DGLRTIS+AY
Sbjct: 573 GGGYRLFTKGASEIVLKKCSYIYGRDGRLEKFTREMQDRLVRNVIEPMASDGLRTISVAY 632
Query: 303 KDFVTDKAEI-NQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI 361
KDF+ K + NQVH EG+P+W+ E +IV LT LCV+GIEDPVRPEVPEAI+KCQRAGI
Sbjct: 633 KDFIPGKTDSPNQVHYEGEPDWESEDSIVCDLTALCVVGIEDPVRPEVPEAIRKCQRAGI 692
Query: 362 TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421
T+RMVTGDN+NTARSIATKCGI K GED+L+LEGKEFN+R+RD NG+VQQ+LLDKVWP+L
Sbjct: 693 TVRMVTGDNVNTARSIATKCGIYKTGEDWLVLEGKEFNQRIRDANGDVQQHLLDKVWPKL 752
Query: 422 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481
RVLARSSP+DKYTLVKG+IDSK+S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVA
Sbjct: 753 RVLARSSPTDKYTLVKGIIDSKVSDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVA 812
Query: 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPL 541
KEASDIILTDDNFSSIVKAVMWGRNVYDSI+KFLQFQLTVNVVAVIVAFIGACAVQDSPL
Sbjct: 813 KEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPL 872
Query: 542 KAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVI 601
KAVQMLWVNLIMDTLASLALATE+PT DLLLRKPYGRTK LIS+TMMKNIIGQA+YQL +
Sbjct: 873 KAVQMLWVNLIMDTLASLALATELPTSDLLLRKPYGRTKPLISRTMMKNIIGQAVYQLTV 932
Query: 602 IFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEG 661
IF +LF GDK+LDIPTGRGAE+GS PTQHFT+IFNTFV+MTLFNEINARKIHGQRNVF+G
Sbjct: 933 IFSLLFAGDKMLDIPTGRGAEFGSEPTQHFTVIFNTFVMMTLFNEINARKIHGQRNVFQG 992
Query: 662 LFT 664
FT
Sbjct: 993 FFT 995
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 668 | ||||||
| FB|FBgn0259214 | 1255 | PMCA "plasma membrane calcium | 0.980 | 0.521 | 0.795 | 3.6e-286 | |
| WB|WBGene00003153 | 1234 | mca-3 [Caenorhabditis elegans | 0.991 | 0.536 | 0.685 | 2.2e-247 | |
| UNIPROTKB|F1N7J2 | 1220 | ATP2B1 "Uncharacterized protei | 0.962 | 0.527 | 0.697 | 1.1e-243 | |
| RGD|621303 | 1258 | Atp2b1 "ATPase, Ca++ transport | 0.962 | 0.511 | 0.694 | 1.4e-243 | |
| UNIPROTKB|P11505 | 1258 | Atp2b1 "Plasma membrane calciu | 0.962 | 0.511 | 0.694 | 1.4e-243 | |
| UNIPROTKB|E2R7S1 | 1220 | ATP2B1 "Uncharacterized protei | 0.962 | 0.527 | 0.695 | 3e-243 | |
| UNIPROTKB|J9P8P9 | 1176 | ATP2B1 "Uncharacterized protei | 0.962 | 0.546 | 0.695 | 3e-243 | |
| UNIPROTKB|F1SPZ4 | 1094 | ATP2B1 "Plasma membrane calciu | 0.962 | 0.587 | 0.695 | 3.8e-243 | |
| UNIPROTKB|P23220 | 1220 | ATP2B1 "Plasma membrane calciu | 0.962 | 0.527 | 0.695 | 3.8e-243 | |
| UNIPROTKB|E7ERY9 | 963 | ATP2B1 "Plasma membrane calciu | 0.962 | 0.667 | 0.694 | 4.9e-243 |
| FB|FBgn0259214 PMCA "plasma membrane calcium ATPase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 2749 (972.8 bits), Expect = 3.6e-286, P = 3.6e-286
Identities = 522/656 (79%), Positives = 590/656 (89%)
Query: 10 HDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVR 69
H ++KSVLQAKLTKLAIQIGYAGSTIA+LTV+ILI Q+C+K FVI+++ WK Y V+
Sbjct: 343 HKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILIIQFCIKTFVIDEKPWKNTYANNLVK 402
Query: 70 FFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 129
I+GVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG
Sbjct: 403 HLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTG 462
Query: 130 TLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 189
TLTTNRMT VQ+Y+CE K +P DIP+ + + I GISVNS YTS IMA N +LP
Sbjct: 463 TLTTNRMTVVQSYICEKLCKVLPTLSDIPQHVGNLITMGISVNSAYTSNIMAGHNPGDLP 522
Query: 190 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRV 248
QVGNKTECALLGFV +G YQ++RD++ E+ FTRVYTFNSVRKSM TVIP+ NG YR+
Sbjct: 523 IQVGNKTECALLGFVQGLGVKYQSIRDEITEDKFTRVYTFNSVRKSMGTVIPRPNGGYRL 582
Query: 249 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 308
YTKGASEII+KKC++IYG G LEKFT+DMQ RL+R VIEPMACDGLRTIS+AY+DFV
Sbjct: 583 YTKGASEIIMKKCAFIYGHEGTLEKFTRDMQERLIREVIEPMACDGLRTISVAYRDFVPG 642
Query: 309 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTG 368
KA IN+VHI+G+PNWDDE NI+++LTCLCV+GIEDPVRPEVP+AI+KCQRAGIT+RMVTG
Sbjct: 643 KAAINEVHIDGEPNWDDEENIMTNLTCLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTG 702
Query: 369 DNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSS 428
DNINTARSIA+KCGI++P +D+LILEGKEFNRR+RD+NG++QQ+L+DKVWP+LRVLARSS
Sbjct: 703 DNINTARSIASKCGILRPNDDFLILEGKEFNRRIRDSNGDIQQHLIDKVWPKLRVLARSS 762
Query: 429 PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDII 488
P+DKYTLVKG+IDS +S REVVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASDII
Sbjct: 763 PTDKYTLVKGIIDSTVSENREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDII 822
Query: 489 LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW 548
LTDDNFSSIVKAVMWGRNVYDSI+KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW
Sbjct: 823 LTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW 882
Query: 549 VNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFF 608
VNLIMDTLASLALATE PTPDLLLRKPYGRTK LIS+TMMKNI+GQA+YQL+IIFG+LF
Sbjct: 883 VNLIMDTLASLALATEFPTPDLLLRKPYGRTKPLISRTMMKNILGQALYQLIIIFGLLFV 942
Query: 609 GDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFT 664
GD +LDI +GRG E + PTQHFTIIFNTFV+MTLFNEINARKIHGQRNV EGL T
Sbjct: 943 GDVILDIESGRGQELNAGPTQHFTIIFNTFVMMTLFNEINARKIHGQRNVIEGLLT 998
|
|
| WB|WBGene00003153 mca-3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 2383 (843.9 bits), Expect = 2.2e-247, P = 2.2e-247
Identities = 458/668 (68%), Positives = 556/668 (83%)
Query: 2 KPVEVAEKHDEK-KSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWK 60
K V AE +K +SVLQAKLT+LAIQIGYAGS +A TV+ILI ++C+ ++ I+ + +
Sbjct: 307 KAVAAAESDGKKERSVLQAKLTRLAIQIGYAGSFVAGCTVLILIIRFCISRYAIDGKSFS 366
Query: 61 AIYFREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNA 120
F+ F+ F I+GVTVLVVAVPEGLPLAVTLSLAYSVKKMM DNNLVRHLDACETMGNA
Sbjct: 367 LADFQHFINFLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMLDNNLVRHLDACETMGNA 426
Query: 121 TAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIM 180
TAICSDKTGTLTTNRMT VQ++V +V YK+ PK E + ++ A +++ IS+NS Y+S+++
Sbjct: 427 TAICSDKTGTLTTNRMTVVQSFVNDVHYKDTPKIESLDQNTAKLMMDCISINSSYSSQVI 486
Query: 181 APENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVI 240
P+ E Q+GNKTEC +LGFV+A+GK+YQ +RD PEE +VYTFNSVRKSMSTVI
Sbjct: 487 PPKQLGEQATQLGNKTECGMLGFVLALGKSYQEIRDRHPEETIPKVYTFNSVRKSMSTVI 546
Query: 241 PKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFT-KDMQGRLVRNVIEPMACDGLRTI 298
+G YRV++KGASEI+ K+C Y G+NG L KF+ KD + LVR+VIEPMA DGLRTI
Sbjct: 547 NLPDGGYRVFSKGASEIVTKRCKYFLGKNGTLTKFSSKDAEN-LVRDVIEPMASDGLRTI 605
Query: 299 SIAYKDFV--TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKC 356
+AYKD+V + K NQ+ +P+W++E IV +T + V+GI+DPVRPEVP AI +C
Sbjct: 606 CVAYKDYVPSSKKTADNQIAYSSEPDWENEEMIVGDMTAIAVLGIQDPVRPEVPAAITRC 665
Query: 357 QRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDK 416
Q AGIT+RMVTGDNINTARSIAT CGI+KPGED++ LEGKEFN R+RD NGEV Q LD
Sbjct: 666 QEAGITVRMVTGDNINTARSIATACGILKPGEDFIALEGKEFNARIRDENGEVSQEKLDL 725
Query: 417 VWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGIT 476
+WP+LRVLAR+ PSDKY LVKG+IDS+++ REVVAVTGDGTNDGPALKKADVGFAMGI
Sbjct: 726 IWPKLRVLARAQPSDKYVLVKGIIDSRVTDSREVVAVTGDGTNDGPALKKADVGFAMGIA 785
Query: 477 GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAV 536
GTDVAKEASDIILTDDNF+SIVKAVMWGRNVYDSI+KFLQFQLTVNVVAV+VAF+GACA+
Sbjct: 786 GTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVVVAFVGACAI 845
Query: 537 QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAI 596
QD+PLKAVQMLWVNLIMDTLASLALATEMPT +LL RKPYGRT LIS+TM KNI+G A+
Sbjct: 846 QDTPLKAVQMLWVNLIMDTLASLALATEMPTEELLKRKPYGRTSPLISRTMCKNILGHAV 905
Query: 597 YQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQR 656
YQLVI+F ++F+G+ +IP+GR A S P++HFTI+FNTFV+MTLFNEINARKIHG+R
Sbjct: 906 YQLVILFTLIFYGEVCFNIPSGRWAPLHSPPSKHFTIVFNTFVMMTLFNEINARKIHGER 965
Query: 657 NVFEGLFT 664
N+F+GLF+
Sbjct: 966 NIFKGLFS 973
|
|
| UNIPROTKB|F1N7J2 ATP2B1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 2348 (831.6 bits), Expect = 1.1e-243, P = 1.1e-243
Identities = 458/657 (69%), Positives = 541/657 (82%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 357 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 416
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 417 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 476
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK IP E IP +I S +V GISVN YTSKI+ PE
Sbjct: 477 TGTLTMNRMTVVQAYINEKHYKKIPDPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 536
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLGF++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G Y
Sbjct: 537 LPRHVGNKTECALLGFLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSY 596
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 597 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 656
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E++IV+ LTC+ V+GIEDPVRPEVP+AIKKCQRAGIT+RMV
Sbjct: 657 AGEPE---------PEWDNENDIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMV 707
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 708 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 768 SSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 827
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 828 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 887
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 888 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 947
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 948 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 1004
|
|
| RGD|621303 Atp2b1 "ATPase, Ca++ transporting, plasma membrane 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 2347 (831.2 bits), Expect = 1.4e-243, P = 1.4e-243
Identities = 456/657 (69%), Positives = 542/657 (82%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 357 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 416
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 417 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 476
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK +P+ E IP +I S +V GISVN YTSKI+ PE
Sbjct: 477 TGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 536
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLGF++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G +
Sbjct: 537 LPRHVGNKTECALLGFLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSF 596
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 597 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 656
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E+++V+ LTC+ V+GIEDPVRPEVPEAIKKCQRAGIT+RMV
Sbjct: 657 AGEPE---------PEWDNENDVVTGLTCIAVVGIEDPVRPEVPEAIKKCQRAGITVRMV 707
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 708 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 768 SSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 827
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 828 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 887
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 888 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 947
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 948 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 1004
|
|
| UNIPROTKB|P11505 Atp2b1 "Plasma membrane calcium-transporting ATPase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 2347 (831.2 bits), Expect = 1.4e-243, P = 1.4e-243
Identities = 456/657 (69%), Positives = 542/657 (82%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 357 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 416
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 417 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 476
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK +P+ E IP +I S +V GISVN YTSKI+ PE
Sbjct: 477 TGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 536
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLGF++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G +
Sbjct: 537 LPRHVGNKTECALLGFLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSF 596
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 597 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 656
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E+++V+ LTC+ V+GIEDPVRPEVPEAIKKCQRAGIT+RMV
Sbjct: 657 AGEPE---------PEWDNENDVVTGLTCIAVVGIEDPVRPEVPEAIKKCQRAGITVRMV 707
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 708 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 768 SSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 827
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 828 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 887
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 888 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 947
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 948 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 1004
|
|
| UNIPROTKB|E2R7S1 ATP2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 2344 (830.2 bits), Expect = 3.0e-243, P = 3.0e-243
Identities = 457/657 (69%), Positives = 541/657 (82%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 357 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 416
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 417 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 476
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK IP+ E IP +I S +V GISVN YTSKI+ PE
Sbjct: 477 TGTLTMNRMTVVQAYINEKHYKKIPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 536
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLG ++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G Y
Sbjct: 537 LPRHVGNKTECALLGLLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSY 596
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 597 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 656
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E++IV+ LTC+ V+GIEDPVRPEVP+AIKKCQRAGIT+RMV
Sbjct: 657 AGEPE---------PEWDNENDIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMV 707
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 708 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 768 SSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 827
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 828 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 887
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 888 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 947
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 948 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 1004
|
|
| UNIPROTKB|J9P8P9 ATP2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 2344 (830.2 bits), Expect = 3.0e-243, P = 3.0e-243
Identities = 457/657 (69%), Positives = 541/657 (82%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 357 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 416
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 417 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 476
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK IP+ E IP +I S +V GISVN YTSKI+ PE
Sbjct: 477 TGTLTMNRMTVVQAYINEKHYKKIPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 536
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLG ++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G Y
Sbjct: 537 LPRHVGNKTECALLGLLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSY 596
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 597 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 656
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E++IV+ LTC+ V+GIEDPVRPEVP+AIKKCQRAGIT+RMV
Sbjct: 657 AGEPE---------PEWDNENDIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMV 707
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 708 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 768 SSPTDKHTLVKGIIDSTVSEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 827
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 828 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 887
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 888 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 947
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 948 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 1004
|
|
| UNIPROTKB|F1SPZ4 ATP2B1 "Plasma membrane calcium-transporting ATPase 1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 2343 (829.8 bits), Expect = 3.8e-243, P = 3.8e-243
Identities = 457/657 (69%), Positives = 541/657 (82%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 357 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 416
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 417 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 476
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK IP+ E IP +I S +V GISVN YTSKI+ PE
Sbjct: 477 TGTLTMNRMTVVQAYINEKHYKKIPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 536
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLG ++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G Y
Sbjct: 537 LPRHVGNKTECALLGLLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSY 596
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 597 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 656
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E++IV+ LTC+ V+GIEDPVRPEVP+AIKKCQRAGIT+RMV
Sbjct: 657 AGEPE---------PEWDNENDIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMV 707
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 708 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 768 SSPTDKHTLVKGIIDSTVSDQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 827
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 828 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 887
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 888 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 947
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 948 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 1004
|
|
| UNIPROTKB|P23220 ATP2B1 "Plasma membrane calcium-transporting ATPase 1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 2343 (829.8 bits), Expect = 3.8e-243, P = 3.8e-243
Identities = 457/657 (69%), Positives = 541/657 (82%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 357 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 416
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 417 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 476
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK IP+ E IP +I S +V GISVN YTSKI+ PE
Sbjct: 477 TGTLTMNRMTVVQAYINEKHYKKIPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 536
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLG ++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G Y
Sbjct: 537 LPRHVGNKTECALLGLLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSY 596
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 597 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 656
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E++IV+ LTC+ V+GIEDPVRPEVP+AIKKCQRAGIT+RMV
Sbjct: 657 AGEPE---------PEWDNENDIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMV 707
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 708 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 767
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 768 SSPTDKHTLVKGIIDSTVSDQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 827
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 828 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 887
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 888 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 947
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 948 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 1004
|
|
| UNIPROTKB|E7ERY9 ATP2B1 "Plasma membrane calcium-transporting ATPase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 2342 (829.5 bits), Expect = 4.9e-243, P = 4.9e-243
Identities = 456/657 (69%), Positives = 541/657 (82%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA----IYFREF 67
++KSVLQ KLTKLA+QIG AG ++ +TV+IL+ + + F ++ W A IY + F
Sbjct: 100 KEKSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYF 159
Query: 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 127
V+FFI+GVTVLVVAVPEGLPLAVT+SLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK
Sbjct: 160 VKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK 219
Query: 128 TGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187
TGTLT NRMT VQAY+ E YK +P+ E IP +I S +V GISVN YTSKI+ PE
Sbjct: 220 TGTLTMNRMTVVQAYINEKHYKKVPEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG 279
Query: 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-Y 246
LP+ VGNKTECALLG ++ + ++YQ VR+++PEE +VYTFNSVRKSMSTV+ +G Y
Sbjct: 280 LPRHVGNKTECALLGLLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKNSDGSY 339
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
R+++KGASEIILKKC I NG + F + +V+ VIEPMA +GLRTI +A++DF
Sbjct: 340 RIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFP 399
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366
+ E P WD+E++IV+ LTC+ V+GIEDPVRPEVP+AIKKCQRAGIT+RMV
Sbjct: 400 AGEPE---------PEWDNENDIVTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMV 450
Query: 367 TGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426
TGDNINTAR+IATKCGI+ PGED+L LEGK+FNRR+R+ GE++Q +DK+WP+LRVLAR
Sbjct: 451 TGDNINTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLAR 510
Query: 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486
SSP+DK+TLVKG+IDS +S R+VVAVTGDGTNDGPALKKADVGFAMGI GTDVAKEASD
Sbjct: 511 SSPTDKHTLVKGIIDSTVSDQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASD 570
Query: 487 IILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQM 546
IILTDDNF+SIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF GAC QDSPLKAVQM
Sbjct: 571 IILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQM 630
Query: 547 LWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGIL 606
LWVNLIMDTLASLALATE PT LLLRKPYGR K LIS+TMMKNI+G A YQLV++F +L
Sbjct: 631 LWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQLVVVFTLL 690
Query: 607 FFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
F G+K DI +GR A + P++H+TI+FNTFVLM LFNEINARKIHG+RNVFEG+F
Sbjct: 691 FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIF 747
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O34431 | ATCL_BACSU | 3, ., 6, ., 3, ., 8 | 0.3306 | 0.8293 | 0.6224 | yes | N/A |
| P11505 | AT2B1_RAT | 3, ., 6, ., 3, ., 8 | 0.6940 | 0.9625 | 0.5111 | yes | N/A |
| Q8Y8Q5 | LMCA1_LISMO | 3, ., 6, ., 3, ., 8 | 0.3089 | 0.8083 | 0.6136 | yes | N/A |
| Q16720 | AT2B3_HUMAN | 3, ., 6, ., 3, ., 8 | 0.6862 | 0.9700 | 0.5311 | yes | N/A |
| P37278 | ATCL_SYNE7 | 3, ., 6, ., 3, ., 8 | 0.3094 | 0.8622 | 0.6220 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 668 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-149 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-101 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 6e-99 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-98 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 8e-67 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-64 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 8e-39 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 2e-38 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-34 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-32 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 7e-32 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-30 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 9e-27 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-26 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-26 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 2e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-23 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 1e-19 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-18 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-17 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 5e-16 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-14 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 6e-14 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-13 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 6e-12 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 3e-11 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 4e-08 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 7e-08 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-06 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 2e-06 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-06 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-06 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 2e-04 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 8e-04 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 0.001 | |
| TIGR01491 | 201 | TIGR01491, HAD-SF-IB-PSPlk, HAD-superfamily, subfa | 0.002 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 0.003 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 819 bits (2117), Expect = 0.0
Identities = 345/655 (52%), Positives = 436/655 (66%), Gaps = 44/655 (6%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFF 71
E + LQ KL++LA IG G A+L ++L +Y + D + F+ F
Sbjct: 271 EDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIR-GDGRDTEEDAQTFLDHF 329
Query: 72 IVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL 131
I+ VT++VVAVPEGLPLAVT++LAYS+KKMMKDNNLVRHL ACETMG+ATAICSDKTGTL
Sbjct: 330 IIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTL 389
Query: 132 TTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE--LP 189
T N M+ VQ Y+ E ++ ++P+ + + +VEGIS+NS + E +
Sbjct: 390 TQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSS------SEEVVDRGGKR 443
Query: 190 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRV 248
+G+KTECALL F + + ++YQ VR EE ++Y FNS RK MS V+ G YR
Sbjct: 444 AFIGSKTECALLDFGLLLLRDYQEVR---AEEKVVKIYPFNSERKFMSVVVKHSGGKYRE 500
Query: 249 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 308
+ KGASEI+LK C NG + D + R +VIEP+A D LRTI +AY+DF +
Sbjct: 501 FRKGASEIVLKPCRKRLDSNGEATPISDDDKDR-CADVIEPLASDALRTICLAYRDFAPE 559
Query: 309 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTG 368
+ P D + LT + V+GI+DP+RP V EA+++CQRAGIT+RMVTG
Sbjct: 560 EF----------PRKDYPNK---GLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTG 606
Query: 369 DNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSS 428
DNI+TA++IA CGI+ G L +EGKEF V +D + P+LRVLARSS
Sbjct: 607 DNIDTAKAIARNCGILTFGG--LAMEGKEFRSLV--------YEEMDPILPKLRVLARSS 656
Query: 429 PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDII 488
P DK LV + D EVVAVTGDGTND PALK ADVGF+MGI+GT+VAKEASDII
Sbjct: 657 PLDKQLLVLMLKDM-----GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDII 711
Query: 489 LTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLW 548
L DDNF+SIV+AV WGRNVYD+I KFLQFQLTVNVVAVI+ F+G+C SPL AVQ+LW
Sbjct: 712 LLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLW 771
Query: 549 VNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFF 608
VNLIMDTLA+LALATE PT LL RKP GR LIS++M KNI+GQA YQLV+ F +LF
Sbjct: 772 VNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFA 831
Query: 609 GDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663
G + D+ + TI+FNTFVL+ LFNEINARK++ +RNVFEGLF
Sbjct: 832 GGSIFDVSGPDEITSHQ-QGELNTIVFNTFVLLQLFNEINARKLY-ERNVFEGLF 884
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 455 bits (1173), Expect = e-149
Identities = 214/655 (32%), Positives = 316/655 (48%), Gaps = 65/655 (9%)
Query: 1 MKPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWK 60
K + E K+ LQ KL KL + + L V+ +
Sbjct: 245 GKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGL---------------- 288
Query: 61 AIYFREFVR-FFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGN 119
+ F+ + + V AVPEGLP VT++LA ++M KDN +VR L+A ET+G+
Sbjct: 289 -FRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGS 347
Query: 120 ATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKI 179
ICSDKTGTLT N+MT + Y+ K+I + + + ++ + T +
Sbjct: 348 VDVICSDKTGTLTQNKMTVKKIYINGGG-KDIDDKDLKDSPALLRFLLAAALCNSVTPE- 405
Query: 180 MAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT--FNSVRKSMS 237
Q G+ TE AL+ F A + L E + + F+S RK MS
Sbjct: 406 ------KNGWYQAGDPTEGALVEF--AEKLGFSLDLSGLEVE-YPILAEIPFDSERKRMS 456
Query: 238 TVI-PKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLR 296
++ + Y ++ KGA E+IL++C I G LE T++ L V E +A +GLR
Sbjct: 457 VIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKE-LASEGLR 511
Query: 297 TISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKC 356
+++AYK + + IE D L L + GIEDP R +V EAI++
Sbjct: 512 VLAVAYKKLDRAEKDDEVDEIESD------------LVFLGLTGIEDPPREDVKEAIEEL 559
Query: 357 QRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDK 416
+ AGI + M+TGD++ TA +IA +CGI E L+++G E + + L +
Sbjct: 560 REAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELD--------ALSDEELAE 611
Query: 417 VWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGIT 476
+ L V AR SP K +V+ + S VVA+TGDG ND PALK ADVG AMG
Sbjct: 612 LVEELSVFARVSPEQKARIVEALQKSG-----HVVAMTGDGVNDAPALKAADVGIAMGGE 666
Query: 477 GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACA- 535
GTD AKEA+DI+L DDNF++IV AV+ GR VY +I KF+ + L+ NV V+ I +
Sbjct: 667 GTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFN 726
Query: 536 VQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQA 595
+ PL +Q+LW+NL+ D+L +LAL E P D++ R P G + L ++ + I
Sbjct: 727 LFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILII 786
Query: 596 IYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINAR 650
I+F + F L T F VL+ L + R
Sbjct: 787 GLLSAILFILTFLL--YLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVR 839
|
Length = 917 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 330 bits (847), Expect = e-101
Identities = 203/615 (33%), Positives = 301/615 (48%), Gaps = 66/615 (10%)
Query: 5 EVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYF 64
E+ E + LQ KL + + I IL VI I + D +
Sbjct: 182 EMRAAEQED-TPLQKKLDEFGELLSKVIGLICILVWVINIGHF-------NDPALGGGWI 233
Query: 65 REFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAIC 124
+ + +F + V + V A+PEGLP +T LA +KM K N +VR L + ET+G T IC
Sbjct: 234 QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVIC 293
Query: 125 SDKTGTLTTNRMT-----AVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYT--- 176
SDKTGTLTTN+M+ A+ + + PE I + V G
Sbjct: 294 SDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEG--GVIKDDGPVAGGQDAGL 351
Query: 177 ---SKIMAPENANELP--------KQVGNKTECALLGFVVAIGKNYQTVRDDLP------ 219
+ I A N + L ++VG TE AL V +G T
Sbjct: 352 EELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMG-LPATKNGVSSKRRPAL 410
Query: 220 ------EEVFTRVYT--FNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHL 271
+ F ++ T F+ RKSMS + G +++ KGA E +L++C++I +G
Sbjct: 411 GCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRA 470
Query: 272 EKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVS 331
T M+ ++ + E LR +++A+KD + E DP + I S
Sbjct: 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLS----DPA--NFEAIES 524
Query: 332 HLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYL 391
LT + V+G+ DP RPEV +AI+KC+ AGI + M+TGDN TA +I + GI P ED
Sbjct: 525 DLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT 584
Query: 392 I--LEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGRE 449
G+EF D G +Q + +R PS K LV+ + E
Sbjct: 585 FKSFTGREF-----DEMGPAKQR---AACRSAVLFSRVEPSHKSELVE-----LLQEQGE 631
Query: 450 VVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 509
+VA+TGDG ND PALKKAD+G AMG +GT+VAKEASD++L DDNF++IV AV GR +Y+
Sbjct: 632 IVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYN 690
Query: 510 SISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPD 569
++ +F+++ ++ N+ V+ F+ A L VQ+LWVNL+ D L + AL P D
Sbjct: 691 NMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKD 750
Query: 570 LLLRKPYGRTKALIS 584
++ + P + LI+
Sbjct: 751 IMWKPPRRPDEPLIT 765
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 322 bits (828), Expect = 6e-99
Identities = 197/615 (32%), Positives = 308/615 (50%), Gaps = 77/615 (12%)
Query: 65 REFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAIC 124
++++ F + V++ V A+PEGLP+ VT++LA V +M K +VR L + ET+G+ IC
Sbjct: 269 KDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVIC 328
Query: 125 SDKTGTLTTNRMTAVQAYVCEVQYK--NIPKYEDIPEDIASKIVEGISVNSGYTSKIMAP 182
SDKTGTLT N MT + + + + N E I V + + A
Sbjct: 329 SDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAG 388
Query: 183 ---ENA---NELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRV--YTFNSVRK 234
NA NE +GN T+ AL+ ++ G D E + RV F+S RK
Sbjct: 389 NLCNNAKFRNEADTLLGNPTDVALIELLMKFGL-------DDLRETYIRVAEVPFSSERK 441
Query: 235 SMSTVI--PKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMAC 292
M+ + + KGA E +LK C+Y ++G T+ + + E MA
Sbjct: 442 WMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAE-MAS 500
Query: 293 DGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEA 352
GLR I+ A P LT L ++GI DP RP V EA
Sbjct: 501 AGLRVIAFASG-----------------PEKGQ-------LTFLGLVGINDPPRPGVKEA 536
Query: 353 IKKCQRAGITIRMVTGDNINTARSIATKCGI-VKPGEDYLILEGKEFNRRVRDNNGEVQQ 411
+ G+ I M+TGD+ TA SIA + G+ K + + G++ + +
Sbjct: 537 VTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQS---VSGEKLD--------AMDD 585
Query: 412 NLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471
L ++ P++ V AR+SP K +VK + +VVA+TGDG ND PALK AD+G
Sbjct: 586 QQLSQIVPKVAVFARASPEHKMKIVKAL-----QKRGDVVAMTGDGVNDAPALKLADIGV 640
Query: 472 AMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFI 531
AMG TGTDVAKEA+D+ILTDD+F++I+ A+ G+ ++++I F+ FQL+ +V A+ + +
Sbjct: 641 AMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIAL 700
Query: 532 GACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNI 591
+PL A+Q+LW+N++MD + +L E D++ + P R +++K ++K I
Sbjct: 701 ATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKI 760
Query: 592 IGQAIYQLVIIFGILF-FGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINAR 650
+ AI +I+ G LF F ++ D G + + T+ F FV +FN + R
Sbjct: 761 LVSAI---IIVVGTLFVFVREMQD---------GVITARDTTMTFTCFVFFDMFNALACR 808
Query: 651 KIHGQRNVFE-GLFT 664
++VFE G F+
Sbjct: 809 --SQTKSVFEIGFFS 821
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 312 bits (802), Expect = 1e-98
Identities = 146/552 (26%), Positives = 226/552 (40%), Gaps = 155/552 (28%)
Query: 12 EKKSVLQAKLTKLAIQIG-YAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRF 70
E ++ LQ+K +L I +A+ + L + W +
Sbjct: 145 ETRTPLQSKRDRLENFIFILFLLLLALAVFLYLFIRG-----------WDP---NSIFKA 190
Query: 71 FIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT 130
+ + VLV+ VP LP AVT++LA ++ K LVR+L+A E +G +CSDKTGT
Sbjct: 191 LLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELGKVDYLCSDKTGT 250
Query: 131 LTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPK 190
LT N+MT Y+ + N +
Sbjct: 251 LTKNKMTLQGVYIDGGKEDNSSSLVAC-----------------------------DNNY 281
Query: 191 QVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVY 249
G+ E ALL + + + ++ V+ F+SV K MS ++ +G ++
Sbjct: 282 LSGDPMEKALLKSA---ELVGKADKGNKEYKIL-DVFPFSSVLKRMSVIVETPDGSDLLF 337
Query: 250 TKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDK 309
KGA E IL++C+ +A GLR ++ A K+ D
Sbjct: 338 VKGAPEFILERCNN-------------------YEEKYLELARQGLRVLAFASKELEDD- 377
Query: 310 AEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGD 369
L L +I EDP+RP+ E I++ + AGI + M+TGD
Sbjct: 378 -----------------------LEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGD 414
Query: 370 NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSP 429
N+ TA++IA + GI V AR SP
Sbjct: 415 NVLTAKAIAKELGID--------------------------------------VFARVSP 436
Query: 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIIL 489
K +V+ + +VA+TGDG ND PALKKADVG AMG AK A+DI+L
Sbjct: 437 EQKLQIVEALQKKG-----HIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVL 485
Query: 490 TDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWV 549
DD+ S+IVKAV GR ++ +I + + + N++ + +A + +
Sbjct: 486 LDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV--------------I 531
Query: 550 NLIMDTLASLAL 561
L++ LA+LAL
Sbjct: 532 ILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 236 bits (604), Expect = 8e-67
Identities = 177/541 (32%), Positives = 274/541 (50%), Gaps = 63/541 (11%)
Query: 71 FIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT 130
F++G+ +V VPEGL VT+ L + K+M + N LV++L+A ET+G+ + ICSDKTGT
Sbjct: 297 FLIGI--IVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGT 354
Query: 131 LTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMA--------- 181
LT NRMT V + + N D ED + + S S+I
Sbjct: 355 LTQNRMT-----VAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKA 409
Query: 182 -PENANELPKQV-GNKTECALLGFVVAIGKNYQTVRDDLPE--EVFTRVYTFNSVRKSMS 237
EN L + V G+ +E ALL + + +R+ P+ E+ FNS K
Sbjct: 410 GQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEI-----PFNSTNKYQL 464
Query: 238 TV----IPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACD 293
++ P+ + + KGA E IL++CS I +G + ++++ +N +
Sbjct: 465 SIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELK-EAFQNAYLELGGL 522
Query: 294 GLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNI-VSHLTCLCVIGIEDPVRPEVPEA 352
G R + + ++ EG D+ N +L + +I + DP R VP+A
Sbjct: 523 GERVLGFCHLYLPDEQ------FPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDA 576
Query: 353 IKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG----EDY---LILEGKEFNRR---- 401
+ KC+ AGI + MVTGD+ TA++IA GI+ G ED L + + N R
Sbjct: 577 VGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKA 636
Query: 402 -------VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVT 454
++D E +L K + V AR+SP K +V+G + A +VAVT
Sbjct: 637 CVVHGSDLKDMTSEQLDEIL-KYHTEI-VFARTSPQQKLIIVEGC--QRQGA---IVAVT 689
Query: 455 GDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKF 514
GDG ND PALKKAD+G AMGI G+DV+K+A+D+IL DDNF+SIV V GR ++D++ K
Sbjct: 690 GDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKS 749
Query: 515 LQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRK 574
+ + LT N+ + I A PL + +L ++L D + +++LA E D++ R+
Sbjct: 750 IAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQ 809
Query: 575 P 575
P
Sbjct: 810 P 810
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 3e-64
Identities = 130/391 (33%), Positives = 199/391 (50%), Gaps = 39/391 (9%)
Query: 223 FTRVYTFNSVRKSMSTVIPKKNG--YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQG 280
F + F+S K M+++ +G Y +Y KGA E I++ CS G++G +D
Sbjct: 527 FIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDR 586
Query: 281 RLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIG 340
L+ +E +A +GLR ++ A K F +Q+ E ES++ L +IG
Sbjct: 587 ELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEF----LGLIG 642
Query: 341 IEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG--------EDYLI 392
I DP R E A++KC +AGI + M+TGD TA++IA + GI+ P D ++
Sbjct: 643 IYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMV 702
Query: 393 LEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVA 452
+ G +F+ + +D + V+AR +P K +++ + K A
Sbjct: 703 MTGSQFD--------ALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRK-----AFCA 749
Query: 453 VTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIS 512
+TGDG ND P+LK A+VG AMGI G+DVAK+ASDI+L+DDNF+SI+ A+ GR ++D+I
Sbjct: 750 MTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIM 809
Query: 513 KFLQFQLTVNVVAVIVAFIGACAVQDS------PLKAVQMLWVNLIMDTLASLALATEMP 566
KF+ L NV I+ IG A +D PL V++LW +I ++ L E
Sbjct: 810 KFVLHLLAENVAEAILLIIG-LAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKA 868
Query: 567 TPDLLLRKPYGR-----TKALISKTMMKNII 592
PDL+ R P+ K LI
Sbjct: 869 APDLMDRLPHDNEVGIFQKELIIDMFAYGFF 899
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 8e-39
Identities = 123/490 (25%), Positives = 213/490 (43%), Gaps = 65/490 (13%)
Query: 66 EFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICS 125
+++ F+ + V V PE LP+ V+ +LA M K +V+ L A + G +C+
Sbjct: 282 DWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCT 341
Query: 126 DKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENA 185
DKTGTLT +++ + K+ D + + ++++ +NS + +
Sbjct: 342 DKTGTLTQDKIE-------------LEKHIDSSGETSERVLKMAWLNSYFQTGW-----K 383
Query: 186 NELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP-KKN 244
N L V K + + D++P F+ R+ +S V+ +
Sbjct: 384 NVLDHAVLAKLD----ESAARQTASRWKKVDEIP---------FDFDRRRLSVVVENRAE 430
Query: 245 GYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKD 304
R+ KGA E +L C++ G + ++ + ++++ M G+R I++A K
Sbjct: 431 VTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEK-SELQDMTAEMNRQGIRVIAVATK- 487
Query: 305 FVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIR 364
T K E D DE L +G DP + EAI + GI ++
Sbjct: 488 --TLKVG------EADFTKTDEEQ----LIIEGFLGFLDPPKESTKEAIAALFKNGINVK 535
Query: 365 MVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424
++TGDN I + GI D+L+ E E+ L + + +
Sbjct: 536 VLTGDNEIVTARICQEVGI--DANDFLLGADIE----------ELSDEELARELRKYHIF 583
Query: 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEA 484
AR +P + K I + V GDG ND PAL+KADVG ++ T D+AKEA
Sbjct: 584 ARLTP-----MQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEA 637
Query: 485 SDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAV 544
SDIIL + + + + V+ GRN + +I K+L+ + N V + + + P+ ++
Sbjct: 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSL 697
Query: 545 QMLWVNLIMD 554
+L NL+ D
Sbjct: 698 HLLIQNLLYD 707
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 2e-38
Identities = 125/531 (23%), Positives = 216/531 (40%), Gaps = 126/531 (23%)
Query: 21 LTKLAIQIG-YAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLV 79
L K+ +IG + I +L ++ L+ F E FRE ++F +V +LV
Sbjct: 199 LQKILSKIGLFLIVLIGVLVLIELVVL-----FFGRGE-----SFREGLQFALV---LLV 245
Query: 80 VAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAV 139
+P +P +++++A ++ K +V L A E + +CSDKTGTLT N+++
Sbjct: 246 GGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLS-- 303
Query: 140 QAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECA 199
+ +D+ + + S+ E+ + + V
Sbjct: 304 ------IDEILPFFNGFDKDDVL--------LYAALASRE---EDQDAIDTAVLGSA--- 343
Query: 200 LLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRK-SMSTVIPKKNG--YRVYTKGASEI 256
K+ + RD F F+ V K + +TV + G ++V TKGA ++
Sbjct: 344 ---------KDLKEARDGYKVLEFV---PFDPVDKRTEATVEDPETGKRFKV-TKGAPQV 390
Query: 257 ILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVH 316
IL C K V ++ +A G R + +A D E + H
Sbjct: 391 ILDLC------------DNKKEIEEKVEEKVDELASRGYRALGVARTD------EEGRWH 432
Query: 317 IEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARS 376
G ++ + DP R + E I++ + G+ ++MVTGD++ A+
Sbjct: 433 FLG------------------LLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKE 474
Query: 377 IATKCGI-----------VKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLA 425
A + G+ D L E V D +G + V+P
Sbjct: 475 TARRLGLGTNIYTADVLLKGDNRDDLPSGLGEM---VEDADGFAE------VFPE----- 520
Query: 426 RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEAS 485
KY +V+ + +V +TGDG ND PALKKADVG A+ TD A+ A+
Sbjct: 521 -----HKYEIVEILQKRG-----HLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAA 569
Query: 486 DIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAV 536
DI+LT+ S IV A++ R ++ + ++ +++ + IV F G +
Sbjct: 570 DIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETI--RIVFFFGLLIL 618
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 139 bits (351), Expect = 4e-34
Identities = 119/470 (25%), Positives = 201/470 (42%), Gaps = 93/470 (19%)
Query: 78 LVVAV---PEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTN 134
L VAV PE LP+ VT +LA K+ K +V+ LDA + G +C+DKTGTLT +
Sbjct: 326 LSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQD 385
Query: 135 RM-----TAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 189
++ T + E +++ +NS Y + + N L
Sbjct: 386 KIVLENHTDISGKTSE------------------RVLHSAWLNSHYQTGL-----KNLLD 422
Query: 190 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKN-GYRV 248
V E ++ +Q + D++P F+ R+ MS V+ + +++
Sbjct: 423 TAV---LEGVDEESARSLASRWQKI-DEIP---------FDFERRRMSVVVAENTEHHQL 469
Query: 249 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 308
KGA E IL CS + NG + M R ++ V + + GLR +++A K
Sbjct: 470 ICKGALEEILNVCSQVR-HNGEIVPLDDIMLRR-IKRVTDTLNRQGLRVVAVATKYLPAR 527
Query: 309 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTG 368
+ + + DES+ L I DP + A+K + +G+T++++TG
Sbjct: 528 EGDYQRA---------DESD----LILEGYIAFLDPPKETTAPALKALKASGVTVKILTG 574
Query: 369 DNINTARSIATKCGI----VKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424
D+ A + + G+ V G D L E +
Sbjct: 575 DSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTT----------------LF 618
Query: 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEA 484
AR +P K +V + VV GDG ND PAL+ AD+G ++ D+A+EA
Sbjct: 619 ARLTPMHKERIVT-----LLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREA 672
Query: 485 SDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTV-----NVVAVIVA 529
+DIIL + + + + V+ GR + ++ K++ ++T NV +V+VA
Sbjct: 673 ADIILLEKSLMVLEEGVIEGRRTFANMLKYI--KMTASSNFGNVFSVLVA 720
|
Length = 902 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 2e-32
Identities = 64/197 (32%), Positives = 92/197 (46%), Gaps = 43/197 (21%)
Query: 336 LCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEG 395
+ VI + D +RP+ EAI + GI + M+TGDN TA +IA + GI
Sbjct: 529 VGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI------------ 576
Query: 396 KEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTG 455
V A P DK +V+ ++ A VA+ G
Sbjct: 577 -------------------------DEVRAELLPEDKAEIVR-----ELQAEGRKVAMVG 606
Query: 456 DGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFL 515
DG ND PAL ADVG AMG +GTDVA EA+D++L D+ S++ +A+ R I + L
Sbjct: 607 DGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNL 665
Query: 516 QFQLTVNVVAVIVAFIG 532
+ N +A+ +A G
Sbjct: 666 FWAFGYNAIAIPLAAGG 682
|
Length = 713 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 7e-32
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 539 SPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQ 598
PL +Q+LW+NL+ D L +LAL E P PDL+ R P + L S+ +++ I+ Q +
Sbjct: 2 LPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLI 61
Query: 599 LVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIH 653
++ + F G I S T+ FNT VL LFN +NAR +
Sbjct: 62 AIVTLLVFFLGLLGFGI---------SESGLAQTMAFNTLVLSQLFNALNARSLR 107
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 3e-30
Identities = 77/246 (31%), Positives = 108/246 (43%), Gaps = 48/246 (19%)
Query: 292 CDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHL----TCLCVIGIEDPVRP 347
DG + I F+ E + + + V + L VI + D +RP
Sbjct: 328 VDGGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRP 387
Query: 348 EVPEAIKKCQRAG-ITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNN 406
E EAI +RAG I + M+TGDN + A ++A + GI D
Sbjct: 388 EAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI--------------------DE- 426
Query: 407 GEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK 466
V A P DK +VK ++ VVA+ GDG ND PAL
Sbjct: 427 ----------------VHAELLPEDKLAIVK-----ELQEEGGVVAMVGDGINDAPALAA 465
Query: 467 ADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAV 526
ADVG AMG G+DVA EA+DI+L +D+ SS+ A+ R I + L + L N+VA+
Sbjct: 466 ADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAI 524
Query: 527 IVAFIG 532
+A G
Sbjct: 525 PLAAGG 530
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 9e-27
Identities = 139/536 (25%), Positives = 238/536 (44%), Gaps = 106/536 (19%)
Query: 68 VRFFIVGVT----------VLVVAV---PEGLPLAVTLSLAYSVKKMMKDNNLVRHLDAC 114
V I G T L VAV PE LP+ V+ +LA M + +V+ L+A
Sbjct: 304 VVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAI 363
Query: 115 ETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSG 174
+ G +C+DKTGTLT +R+ + E + ++ +D ++++ +NS
Sbjct: 364 QNFGAMDVLCTDKTGTLTQDRI------ILE-HHLDVSGRKD------ERVLQLAWLNSF 410
Query: 175 YTSKIMAPENANELPKQVGNKTECALLGFVVAIGK-----NYQTVRDDLPEEVFTRVYTF 229
+ S + N + A++ F + Y+ V D+LP F
Sbjct: 411 HQSG-------------MKNLMDQAVVAFAEGNPEIVKPAGYRKV-DELP---------F 447
Query: 230 NSVRKSMSTVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIE 288
+ VR+ +S V+ G + + KGA E +L +++ R+G + + + + + E
Sbjct: 448 DFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHV--RDGDTVRPLDEARRERLLALAE 505
Query: 289 PMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIV--SHLTCLCVIGIEDPVR 346
DG R + +A ++ ++ Q DE ++V LT L DP +
Sbjct: 506 AYNADGFRVLLVATREIPGGESR-AQYST------ADERDLVIRGFLTFL------DPPK 552
Query: 347 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNN 406
AI + G+ ++++TGDN I + G+ +PGE L G E +
Sbjct: 553 ESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGL-EPGE---PLLGTEI-----EAM 603
Query: 407 GEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK 466
+ L + V A+ +P K ++K + A V GDG ND PAL+
Sbjct: 604 DDAA---LAREVEERTVFAKLTPLQKSRVLKAL-----QANGHTVGFLGDGINDAPALRD 655
Query: 467 ADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTV----- 521
ADVG ++ +G D+AKE++DIIL + + + + V+ GR + +I K+L +T
Sbjct: 656 ADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYL--NMTASSNFG 712
Query: 522 NVVAVIV--AFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKP 575
NV +V+V AFI P+ A+ +L NL+ D ++ L+L + + LRKP
Sbjct: 713 NVFSVLVASAFIPF-----LPMLAIHLLLQNLMYD-ISQLSLPWDKMDKE-FLRKP 761
|
Length = 903 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 1e-26
Identities = 139/647 (21%), Positives = 231/647 (35%), Gaps = 137/647 (21%)
Query: 77 VLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRM 136
++ + VP LP +++ + S+ ++ K G C DKTGTLT + +
Sbjct: 405 IITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGL 464
Query: 137 TAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKT 196
+ + + S + ++ T K+ +L VG+
Sbjct: 465 DLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLT-KL-----EGKL---VGDPL 515
Query: 197 ECALLGFVVAI-----------GKNYQTVRDDLPEEV-FTRVYTFNSVRKSMSTVIPKKN 244
+ + DD P+E+ R + F+S + MS VI N
Sbjct: 516 DKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMS-VIVSTN 574
Query: 245 GYRV---YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIA 301
R + KGA E I C E D Q V++ +G R +++A
Sbjct: 575 DERSPDAFVKGAPETIQSLC--------SPETVPSDYQ-----EVLKSYTREGYRVLALA 621
Query: 302 YKDFVTDKAEINQV-HIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAG 360
YK+ K + + + D ESN LT L I E+P++P+ E IK+ +RA
Sbjct: 622 YKEL--PKLTLQKAQDLSRD---AVESN----LTFLGFIVFENPLKPDTKEVIKELKRAS 672
Query: 361 ITIRMVTGDNINTARSIATKCGIVKPGEDYLIL---------EGKEFNRRVRD-----NN 406
I M+TGDN TA +A +CGIV P + LIL + + V D +
Sbjct: 673 IRTVMITGDNPLTAVHVARECGIVNP-SNTLILAEAEPPESGKPNQIKFEVIDSIPFAST 731
Query: 407 GEVQ---------------------------------QNLLDKVWPRLRVLARSSPSDKY 433
LL ++ V AR +P K
Sbjct: 732 QVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKE 791
Query: 434 TLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM-----GITGTDVAKEASDII 488
TLV+ + V + GDG ND ALK+ADVG ++ + +K AS
Sbjct: 792 TLVELLQKLD-----YTVGMCGDGANDCGALKQADVGISLSEAEASVAAPFTSKLAS--- 843
Query: 489 LTDDNFSSIVKAVMWGR-NVYDSISKF---LQFQLTVNVVAVIVAFIGACAVQDSPLKAV 544
S + + GR + S F + L I+ IG S L
Sbjct: 844 -----ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIG------SNLGDG 892
Query: 545 QMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFG 604
Q L ++L++ +L ++ P L +P L S ++ +++ Q + ++
Sbjct: 893 QFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSN---LFSVYILTSVLIQFVLHILSQVY 949
Query: 605 ILFFGDKL----LDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEI 647
++F + P E P T++F ++ F +
Sbjct: 950 LVFELHAQPWYKPENPVDLEKEN--FPNLLNTVLF----FVSSFQYL 990
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 1e-26
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 43/193 (22%)
Query: 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK 396
V+ + D ++PE E I+ +R GI M+TGDN TA+++A + GI
Sbjct: 407 GVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN----------- 455
Query: 397 EFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGD 456
V A P DK L+K K+ +VVA+ GD
Sbjct: 456 --------------------------VRAEVLPDDKAALIK-----KLQEKGKVVAMVGD 484
Query: 457 GTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQ 516
G ND PAL +ADVG A+G GTDVA EA+D++L ++ + + A+ R I + L
Sbjct: 485 GINDAPALAQADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLL 543
Query: 517 FQLTVNVVAVIVA 529
+ NV+A+ +A
Sbjct: 544 WAFGYNVIAIPIA 556
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 2e-25
Identities = 167/710 (23%), Positives = 280/710 (39%), Gaps = 153/710 (21%)
Query: 59 WKAIYFREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNL----------- 107
A F F+ F I+ ++ +P + L V+L L SV+ +++L
Sbjct: 292 AAANGFFSFLTFLILFSSL----IP--ISLYVSLELVKSVQAYFINSDLQMYHEKTDTPA 345
Query: 108 -VRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQY-KNIPKYEDI-------- 157
VR + E +G I SDKTGTLT N M + + V Y + +D
Sbjct: 346 SVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSY 405
Query: 158 -----PEDIASKIVEGIS---VNSGYTSKIMAP---------------------ENANEL 188
+ SK + V+ T+K A + E+
Sbjct: 406 VENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEI 465
Query: 189 PKQVGNKTECAL------LGFVVAIGKNYQTVRDDLPEEVFTRVYT------FNSVRKSM 236
Q + E AL +GFV + +++ + T+ Y FNS RK M
Sbjct: 466 TYQAASPDEAALVKAARDVGFVF-FERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRM 524
Query: 237 STVIPKKNG-YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGL 295
S ++ +G ++ KGA +I K+ S G N E+ + +E A +GL
Sbjct: 525 SVIVRNPDGRIKLLCKGADTVIFKRLSS--GGNQVNEETKEH---------LENYASEGL 573
Query: 296 RTISIAYKDFVTDKAEI-NQVHIEGDPNWDDES--------NIVSHLTCLCVIGIEDPVR 346
RT+ IAY++ ++ E N+ + E D +I L L IED ++
Sbjct: 574 RTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633
Query: 347 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL---------EGKE 397
VPE I+ ++AGI I ++TGD + TA +I C ++ + +++ +
Sbjct: 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVEA 693
Query: 398 FNRRVRDNNGEVQQNLLDK---------------VWPRLR------------VLA-RSSP 429
+ + E NL D + L V+ R SP
Sbjct: 694 AIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSP 753
Query: 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD--VAKEASDI 487
S K +V+ ++ K S G+ +A+ GDG ND +++ADVG +GI+G + A ASD
Sbjct: 754 SQKADVVR-LV--KKSTGKTTLAI-GDGANDVSMIQEADVG--VGISGKEGMQAVMASDF 807
Query: 488 ILTDDNFSSIVKAVMW-GRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQ- 545
+ F + K ++ GR Y ISK + + N++ I+ F + S +
Sbjct: 808 AIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEG 865
Query: 546 --MLWVNLIMDTLASLALAT--EMPTPDLLLRKP--YGRT---KALISKTMMKNIIGQAI 596
M+ N+ L ++L + + L LR P Y + +KT ++ I
Sbjct: 866 WYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWML-DGI 924
Query: 597 YQLVIIFGILFFGDKLLDI-PTGRGAEYGSLPTQHFT---IIFNTFVLMT 642
YQ ++IF F L D +G ++ S+ FT +I N + +
Sbjct: 925 YQSLVIFFFPMFAYILGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIALE 974
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 3e-23
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 43/196 (21%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGIT-IRMVTGDNINTARSIATKCGIVKPGEDYLILEGK 396
I + D RP+ EAI + + GI + M+TGD A +A + GI
Sbjct: 356 YILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI------------- 402
Query: 397 EFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGD 456
EV LL P DK +VK ++ VA+ GD
Sbjct: 403 ----------DEVHAELL--------------PEDKLEIVK-----ELREKYGPVAMVGD 433
Query: 457 GTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQ 516
G ND PAL ADVG AMG +G+DVA E +D++L +D+ S + +A+ R + + +
Sbjct: 434 GINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVV 493
Query: 517 FQLTVNVVAVIVAFIG 532
L + ++ +++A G
Sbjct: 494 IALGIILLLILLALFG 509
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 1e-19
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 183 ENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVI-- 240
+ +G+ TE ALL F +G + + +R P FNS RK MSTV
Sbjct: 11 NEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRV---AEIPFNSERKRMSTVHKL 67
Query: 241 PKKNGYRVYTKGASEIILKKCSYI 264
+GYR++ KGA E IL++CS I
Sbjct: 68 EDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 3e-18
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 4 VEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIY 63
+ E+ K+ LQ L KLA + +AIL +I
Sbjct: 127 ARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWF-----------------FR 169
Query: 64 FREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACET 116
+F+ + + VLV A PE LPLAV L+LA ++ K LV++L A ET
Sbjct: 170 GGDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 2e-17
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 43/168 (25%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397
VI ++D V+P + E + ++ GI M+TGDN TA +IA + G+ +D++
Sbjct: 441 VIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV----DDFI------ 490
Query: 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 457
A ++P DK L++ + A +VA+TGDG
Sbjct: 491 ---------------------------AEATPEDKLALIR-----QEQAEGRLVAMTGDG 518
Query: 458 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGR 505
TND PAL +ADVG AM +GT AKEA++++ D N + +++ V G+
Sbjct: 519 TNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGK 565
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 81.4 bits (202), Expect = 5e-16
Identities = 53/158 (33%), Positives = 78/158 (49%), Gaps = 43/158 (27%)
Query: 336 LCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEG 395
L VI ++D V+P + E + ++ GI M+TGDN TA +IA + G+ +D+L
Sbjct: 437 LGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV----DDFL---- 488
Query: 396 KEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTG 455
A ++P DK L++ + A +VA+TG
Sbjct: 489 -----------------------------AEATPEDKLALIR-----QEQAEGRLVAMTG 514
Query: 456 DGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 493
DGTND PAL +ADVG AM +GT AKEA +++ D N
Sbjct: 515 DGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 1e-14
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 44/196 (22%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397
VI ++D V+ + E + ++ GI M+TGDN TA +IA + G+ +D++
Sbjct: 440 VIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV----DDFI------ 489
Query: 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 457
A ++P DK L++ + A ++VA+TGDG
Sbjct: 490 ---------------------------AEATPEDKIALIR-----QEQAEGKLVAMTGDG 517
Query: 458 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQF 517
TND PAL +ADVG AM +GT AKEA++++ D + + +++ V G+ + + F
Sbjct: 518 TNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTF 576
Query: 518 QLTVNVVAVIVAFIGA 533
+ N VA A I A
Sbjct: 577 SIA-NDVAKYFAIIPA 591
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 6e-14
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 45/153 (29%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397
+I ++D +R + +AI + + GI M+TGDN A +IA + GI D+
Sbjct: 562 LIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI-----DF------- 609
Query: 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 457
+ LL P DK V ++++ +A+ GDG
Sbjct: 610 ------------RAGLL--------------PEDKVKAV-----TELNQ-HAPLAMVGDG 637
Query: 458 TNDGPALKKADVGFAMGITGTDVAKEASDIILT 490
ND PA+K A +G AMG +GTDVA E +D LT
Sbjct: 638 INDAPAMKAASIGIAMG-SGTDVALETADAALT 669
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 2e-13
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 43/164 (26%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397
++ I DP+R + A+++ +AG + M+TGDN TA +IA + GI
Sbjct: 644 LLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------- 690
Query: 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 457
V+A P K +K + S GR+V A+ GDG
Sbjct: 691 ------------------------EVIAGVLPDGKAEAIKRLQ----SQGRQV-AMVGDG 721
Query: 458 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
ND PAL +ADVG AMG G+DVA E + I L + + A+
Sbjct: 722 INDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADAL 764
|
Length = 834 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 6e-12
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 20/159 (12%)
Query: 17 LQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVT 76
L KL+KLA+ + IAI+ +I+++ + KF ++ E AIY +
Sbjct: 275 LHRKLSKLAVILFC----IAIIFAIIVMAAH---KFDVDKE--VAIY----------AIC 315
Query: 77 VLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRM 136
+ + +PE L +++++A M K N +VR LDA E +G ICSDKTGT+T +M
Sbjct: 316 LAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKM 375
Query: 137 TAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGY 175
A Q ++ +I +D + V GI S Y
Sbjct: 376 IARQIWIPRFGTISIDNSDD-AFNPNEGNVSGIPRFSPY 413
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 66.3 bits (161), Expect = 3e-11
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 49/215 (22%)
Query: 326 ESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK 385
E N + L VI ++D ++ + E ++ + GI M TGDN TA +IA + G+
Sbjct: 428 EDNEI-----LGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD- 481
Query: 386 PGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKIS 445
R +A P DK +++ +
Sbjct: 482 ------------------------------------RFVAECKPEDKINVIR-----EEQ 500
Query: 446 AGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGR 505
A +VA+TGDGTND PAL +A+VG AM +GT AKEA+++I D N + +++ V+ G+
Sbjct: 501 AKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGK 559
Query: 506 NVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSP 540
+ + F + N +A A + A + P
Sbjct: 560 QLLMTRGSLTTFSIA-NDIAKYFAILPAMFMAAMP 593
|
Length = 673 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 4e-08
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 34 TIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVPEGLPLAVTLS 93
IA++T VI W I +FV V VTVL++A P L LA
Sbjct: 215 AIALITFVI----------------W-LILGADFVFALEVAVTVLIIACPCALGLATPTV 257
Query: 94 LAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAV 139
+A + K+ L++ DA E N + DKTGTLT + T
Sbjct: 258 IAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVT 303
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 7e-08
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 71 FIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT 130
+ VLVVA P L LA +++ ++ + L++ DA E + + DKTGT
Sbjct: 197 LYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGT 256
Query: 131 LTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIAS 163
LTT + T V E E++ A+
Sbjct: 257 LTTGKPTVVD---IEPLDDASISEEELLALAAA 286
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-06
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 18/143 (12%)
Query: 4 VEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIY 63
V + E+ +K+ Q + + A T +L + + I + V + W
Sbjct: 148 VNLVEEAQSRKAKTQRFIDRFA-----RYYTPVVLAIALAI--WLVPGLLKRWPFW---- 196
Query: 64 FREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAI 123
+ +LVVA P L ++ + ++ + L++ A E + +
Sbjct: 197 -------VYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTV 249
Query: 124 CSDKTGTLTTNRMTAVQAYVCEV 146
DKTGTLTT R V EV
Sbjct: 250 AFDKTGTLTTGRPKVVDVVPAEV 272
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 2e-06
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 226 VYTFNSVRKSMSTVI--PKKNGYRVYTKGASEIILKKCSYIYGRN------GHLEKFTKD 277
++ F+S RK MS ++ P K +V+ KGA + N HL ++
Sbjct: 608 LHEFDSDRKRMSVILGCPDKT-VKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSL 666
Query: 278 MQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDD-----------E 326
GLRT+ + ++ + +E Q H +
Sbjct: 667 ----------------GLRTLVVGMREL--NDSEFEQWHFSFEAASTALIGRAALLRKVA 708
Query: 327 SNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSI 377
SN+ ++LT L IED ++ VPEAI+ + AGI + ++TGD TA SI
Sbjct: 709 SNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759
|
Length = 1178 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 2e-06
Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 31/145 (21%)
Query: 324 DDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGI 383
V L L +I + DP+ P EA+K+ + AGI + ++TGDN TA +IA G+
Sbjct: 74 GATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL 133
Query: 384 VKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSK 443
D L+ + K P++ LA +
Sbjct: 134 ----FDALVS------------ADLYGLVGVGKPDPKIFELAL---------------EE 162
Query: 444 ISAGREVVAVTGDGTNDGPALKKAD 468
+ E V + GDG ND PA K A
Sbjct: 163 LGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 5e-06
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 16/103 (15%)
Query: 35 IAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVPEGLPLAVTLSL 94
IA LT + W ++ + VLV+A P L LA ++
Sbjct: 336 IAALTFAL----------------WPLFGGGDWETALYRALAVLVIACPCALGLATPTAI 379
Query: 95 AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMT 137
+ + + L++ +A E + + DKTGTLT +
Sbjct: 380 LVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPE 422
|
Length = 713 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 448 REVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
EV+A GD TND L+ A +G AMG + KE +D + T ++ + +A+
Sbjct: 206 EEVIAF-GDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEAL 257
|
Length = 264 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 490
K + ++ + + + E V GDG ND L+ A G AMG + K +D + T
Sbjct: 188 SKGSALQSLAE-ALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYV-T 244
Query: 491 DDN 493
D N
Sbjct: 245 DSN 247
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.001
Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 18/134 (13%)
Query: 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401
E + P V EA+K+ + GI + + T + + + G+ D +I
Sbjct: 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY-FDPVI--------- 71
Query: 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPS-DKYTLVKGMIDSKISAGREVVAVTGDGTND 460
+NG + ++ P+ DK ++ EV+ V GD ND
Sbjct: 72 --TSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPE---EVLMV-GDSLND 125
Query: 461 GPALKKA-DVGFAM 473
K A +G A+
Sbjct: 126 IEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|233437 TIGR01491, HAD-SF-IB-PSPlk, HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 21/136 (15%)
Query: 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401
E +R E ++ + G+ +V+G + A+ +A K DY+ N
Sbjct: 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNP-----DYVYS-----NEL 127
Query: 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDG 461
V D G +Q +RV + +K V+ + +++ GD ND
Sbjct: 128 VFDEKGFIQP------DGIVRV----TFDNKGEAVERL-KRELNPSLTETVAVGDSKNDL 176
Query: 462 PALKKADVGFAMGITG 477
P + AD+ ++G G
Sbjct: 177 PMFEVADISISLGDEG 192
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by This model are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. Length = 201 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.003
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 72 IVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL 131
++ TVL++A P L LA +S+ V + + LVR DA + + DKTGTL
Sbjct: 469 VIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTL 528
Query: 132 T 132
T
Sbjct: 529 T 529
|
Length = 834 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 668 | |||
| KOG0204|consensus | 1034 | 100.0 | ||
| KOG0202|consensus | 972 | 100.0 | ||
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203|consensus | 1019 | 100.0 | ||
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0206|consensus | 1151 | 100.0 | ||
| KOG0210|consensus | 1051 | 100.0 | ||
| KOG0208|consensus | 1140 | 100.0 | ||
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0209|consensus | 1160 | 100.0 | ||
| KOG0207|consensus | 951 | 100.0 | ||
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| KOG0205|consensus | 942 | 100.0 | ||
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.89 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.68 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.58 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.57 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.53 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.49 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.48 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.47 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.46 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.41 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.41 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.4 | |
| PLN02887 | 580 | hydrolase family protein | 99.4 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.37 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.24 | |
| KOG4383|consensus | 1354 | 99.22 | ||
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.21 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.19 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.17 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.13 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.08 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.08 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.08 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.05 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.03 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.03 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.03 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.96 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.89 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.75 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.71 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 98.7 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.63 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.61 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.59 | |
| KOG1615|consensus | 227 | 98.52 | ||
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.51 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.34 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.33 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.33 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.31 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.29 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.29 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.28 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.25 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.24 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.22 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.22 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.21 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.17 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.1 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.07 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.03 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.02 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.98 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.96 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.96 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.93 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.92 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.84 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.75 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.75 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.72 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.68 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.68 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.62 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.62 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.59 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.59 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.54 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.54 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.52 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.45 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.42 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.38 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.35 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.35 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.31 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.29 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.25 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.2 | |
| PLN02423 | 245 | phosphomannomutase | 97.19 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.14 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.11 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.07 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.02 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.0 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.96 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.93 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.9 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.87 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.87 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.87 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.84 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.82 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.8 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.76 | |
| PLN02940 | 382 | riboflavin kinase | 96.75 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.69 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.69 | |
| PLN02811 | 220 | hydrolase | 96.6 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.54 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.54 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.54 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.52 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.52 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.5 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.41 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 96.41 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.31 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.28 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 96.15 | |
| KOG3120|consensus | 256 | 96.09 | ||
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 96.07 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 96.04 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.04 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.99 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 95.98 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 95.92 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.9 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.81 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.7 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.04 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 95.01 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 95.0 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 94.88 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 94.77 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.57 | |
| PLN02151 | 354 | trehalose-phosphatase | 94.56 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 94.22 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.73 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 93.49 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 93.28 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 93.23 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 92.57 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 91.94 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 90.91 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 90.79 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 89.61 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 89.13 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 88.68 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 88.29 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 88.1 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 87.57 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 85.49 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 84.66 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 84.61 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 83.78 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 83.67 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 83.62 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 82.66 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 81.28 |
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-124 Score=996.61 Aligned_cols=630 Identities=60% Similarity=0.947 Sum_probs=575.3
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccch---hhHHHHHHHHHHHHHHHHhhhhhhcc
Q psy11770 7 AEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDE---EWKAIYFREFVRFFIVGVTVLVVAVP 83 (668)
Q Consensus 7 ~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~ilv~~iP 83 (668)
..+..+++||||-+|+++|.+|+++++.+++++++++++.|+...+...+. .|.......+.+.|+.+++++++|+|
T Consensus 319 l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVP 398 (1034)
T KOG0204|consen 319 LGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVP 398 (1034)
T ss_pred hhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECC
Confidence 344555789999999999999999999999999999999998877655433 56667788899999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCC-CCCCCCHHHH
Q psy11770 84 EGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIP-KYEDIPEDIA 162 (668)
Q Consensus 84 ~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~~~~~~~~~~ 162 (668)
||||+++|++++++++||++++.+||+++++|++|+.++||+|||||||+|+|+|++.|+++..++... +....++...
T Consensus 399 EGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~ 478 (1034)
T KOG0204|consen 399 EGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLL 478 (1034)
T ss_pred CCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998887433 3245788889
Q ss_pred HHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEee
Q psy11770 163 SKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK 242 (668)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~ 242 (668)
+.+.++++.|++ ..+..++..+..+.+.|+|+|.||+.+..++|.+++..|. +.++.+.+||+|.||||+++++.
T Consensus 479 ~ll~~gI~~Nt~--g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~---e~~v~kv~~FNS~kK~~gvvi~~ 553 (1034)
T KOG0204|consen 479 DLLLQGIAQNTT--GSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRP---EEKVVKVYPFNSVKKRMGVVIKL 553 (1034)
T ss_pred HHHHHHHhhcCC--CeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcc---hhheeEEeccCcccceeeEEEEc
Confidence 999999998874 3566666666688999999999999999999999999884 45678999999999999999986
Q ss_pred -CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 243 -KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 243 -~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
+++.++|+|||+|.++.+|+++++.+|+..+++++.+. .+++.++.|+++|||++|+|||++... ..+++
T Consensus 554 ~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~-~~~~~Ie~mA~~~LRti~lAy~df~~~--------~~~~~ 624 (1034)
T KOG0204|consen 554 PDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRK-SFKDVIEPMASEGLRTICLAYRDFVAG--------PDEEP 624 (1034)
T ss_pred CCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHH-HHHHHHHHHHHhhhheeeEEeeccccC--------CCCCC
Confidence 44413999999999999999999999999999998887 678999999999999999999997654 12334
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
++++++..+.+++++|++|++||+||+++++|+.|++|||.|.|+||||..||++||.+|||+.++++.++++|.++.+
T Consensus 625 ~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~- 703 (1034)
T KOG0204|consen 625 SWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRE- 703 (1034)
T ss_pred CccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhh-
Confidence 4555566789999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
..+++.++++++.+|+||.+|.||..+|+.| +..+++|+++|||.||+|||++||||.|||+.|+++|
T Consensus 704 -------~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L-----~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVA 771 (1034)
T KOG0204|consen 704 -------LSQEERDKIWPKLRVLARSSPNDKHLLVKGL-----IKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVA 771 (1034)
T ss_pred -------cCHHHHHhhhhhheeeecCCCchHHHHHHHH-----HhcCcEEEEecCCCCCchhhhhcccchhccccchhhh
Confidence 4788999999999999999999999999997 4579999999999999999999999999999999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHh
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLAL 561 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l 561 (668)
|++||++++||||.+|++++.|||+.|.||+|+++|+++.|++.+++.|.+++..+.+|++++|+||+|++||.+.+++|
T Consensus 772 KEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALAL 851 (1034)
T KOG0204|consen 772 KEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALAL 851 (1034)
T ss_pred hhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHHH
Q psy11770 562 ATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLM 641 (668)
Q Consensus 562 ~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~ 641 (668)
++|||.+++|+|+|++|++++|++.||.++++|++||.+++|.+.|.|..+|+... +.+..+.+.+|++|++||+|
T Consensus 852 ATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~----~~~~~~~~~nTiIFNtFV~~ 927 (1034)
T KOG0204|consen 852 ATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNG----PLHSPPSVHNTIIFNTFVFC 927 (1034)
T ss_pred ccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCC----CCCCchhhheeeehhHHHHH
Confidence 99999999999999999999999999999999999999999999999998886432 23445667889999999999
Q ss_pred HHHHHHHhhcccCCcccccccccCCCC
Q psy11770 642 TLFNEINARKIHGQRNVFEGLFTTHSV 668 (668)
Q Consensus 642 ~~~~~~~~r~~~~~~~~~~~~~~n~~~ 668 (668)
|+||.+|+|+.+ ++|+|+|+++|++|
T Consensus 928 qvFNEinaRki~-~~NvFkgi~~N~~F 953 (1034)
T KOG0204|consen 928 QVFNEINARKID-ERNVFKGIFRNRLF 953 (1034)
T ss_pred HHHHHHhhcchh-HHhHHHHHhcCceE
Confidence 999999999988 57999999999875
|
|
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-109 Score=884.44 Aligned_cols=635 Identities=33% Similarity=0.499 Sum_probs=507.7
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..+++++++||||+.+|+|+++++.+...+++.+.++-+.+|. .-..+..| +....++|..++++.++|
T Consensus 221 ~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~---~p~~~g~~----fk~~~~~f~IaVsLAVAA 293 (972)
T KOG0202|consen 221 KIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL---DPVHGGSW----FKGALYYFKIAVSLAVAA 293 (972)
T ss_pred HHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc---cccccccc----hhchhhhhhHHHHHHHHh
Confidence 44555667788899999999999999997766666655544332221 01122333 345578899999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCC---------
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIP--------- 152 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~--------- 152 (668)
||||||+.+|+++++|.+||+|++++||+++++|+||.+++||+|||||||+|+|++.++|+.+..+....
T Consensus 294 IPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty 373 (972)
T KOG0202|consen 294 IPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTY 373 (972)
T ss_pred ccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999998765332210
Q ss_pred --C-----------CCCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhh--
Q psy11770 153 --K-----------YEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDD-- 217 (668)
Q Consensus 153 --~-----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~-- 217 (668)
. ......+..+.+....+.|+... ...+.. +.+...|.|+|.||..++.+.|..-......
T Consensus 374 ~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~---v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~ 449 (972)
T KOG0202|consen 374 SPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDAT---VEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSN 449 (972)
T ss_pred CCCCceEecCccccccccccHHHHHHHHHHHhhhhhh---hhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhhcccc
Confidence 0 00112233444555444444322 111122 5567799999999999999987654321111
Q ss_pred ---------CC-ccceeeeeccCCCCceEEEEEee-C--CeEEEEEcCchHHHHhhcccccccCC-ccccCCHHHHHHHH
Q psy11770 218 ---------LP-EEVFTRVYTFNSVRKSMSTVIPK-K--NGYRVYTKGASEIILKKCSYIYGRNG-HLEKFTKDMQGRLV 283 (668)
Q Consensus 218 ---------~~-~~~~~~~~~F~s~rk~msvvv~~-~--~~~~~~~KGa~e~il~~c~~~~~~~~-~~~~~~~~~~~~~~ 283 (668)
+. ..+...++||+|+||+|||.+.+ . .++.+|+|||+|.|+++|++++..+| ...++++..|+.+.
T Consensus 450 ~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il 529 (972)
T KOG0202|consen 450 EEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETIL 529 (972)
T ss_pred cccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHH
Confidence 00 12335789999999999999986 2 35899999999999999999887776 45899999988865
Q ss_pred HHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEE
Q psy11770 284 RNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITI 363 (668)
Q Consensus 284 ~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v 363 (668)
+...+|+++|||+|++|+++.+...-+. . ...+...+...|+||+|+|++|+.||+|++++++|+.|+++||||
T Consensus 530 -~~~~~~g~~gLRvLalA~~~~~~~~~~~--~---~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV 603 (972)
T KOG0202|consen 530 -ANVYEMGSEGLRVLALASKDSPGQVPDD--Q---DLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRV 603 (972)
T ss_pred -HHHHHHhhccceEEEEEccCCcccChhh--h---hhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEE
Confidence 6778899999999999999876410000 0 001122345678999999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCccCCCc--eEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHH
Q psy11770 364 RMVTGDNINTARSIATKCGIVKPGED--YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMID 441 (668)
Q Consensus 364 ~~~TGd~~~ta~~ia~~~gi~~~~~~--~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~ 441 (668)
.|+|||+..||.+||+++|+...+.+ .-.++|.+++++ .++.++....+..+|+|++|++|.+||+.|
T Consensus 604 ~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~l--------s~~~~~~~~~~~~vFaR~~P~HK~kIVeaL-- 673 (972)
T KOG0202|consen 604 IMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDL--------SDEELDDAVRRVLVFARAEPQHKLKIVEAL-- 673 (972)
T ss_pred EEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcC--------CHHHHHHHhhcceEEEecCchhHHHHHHHH--
Confidence 99999999999999999999776553 347889888864 567777888889999999999999999997
Q ss_pred hhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 442 SKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTV 521 (668)
Q Consensus 442 ~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~ 521 (668)
|..|+.|+|+|||+||+|+||.||||||||++|++++|+|||+|+.||||+.|..+++|||.+|+|+++++.|.++.
T Consensus 674 ---q~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSs 750 (972)
T KOG0202|consen 674 ---QSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSS 750 (972)
T ss_pred ---HhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy11770 522 NVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVI 601 (668)
Q Consensus 522 n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (668)
|+..+...++...++.+.|++|+|+||+|+++|.+|+.+|+.+||++|+|++|||+.++++++.+.+++++..|+|..+.
T Consensus 751 nVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~ 830 (972)
T KOG0202|consen 751 NVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVA 830 (972)
T ss_pred hHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887654
Q ss_pred HHHHHHhhccccCCCCCCCCC--CC-------------CcccchhhHHHHHHHHHHHHHHHHhhcccCCcccc-cccccC
Q psy11770 602 IFGILFFGDKLLDIPTGRGAE--YG-------------SLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVF-EGLFTT 665 (668)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~--~~-------------~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~~n 665 (668)
..+.+.+-....+-.-.+.+. |. .+.....||+|+.||+...||.++||+... ++| .++|+|
T Consensus 831 Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~--slf~~~~~~N 908 (972)
T KOG0202|consen 831 TVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENK--SLFTMPPWSN 908 (972)
T ss_pred EhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCc--ceEEeccccc
Confidence 433322111100000000000 00 011234599999999999999999999764 566 499999
Q ss_pred CCC
Q psy11770 666 HSV 668 (668)
Q Consensus 666 ~~~ 668 (668)
+||
T Consensus 909 ~~l 911 (972)
T KOG0202|consen 909 RWL 911 (972)
T ss_pred HHH
Confidence 986
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-99 Score=878.15 Aligned_cols=603 Identities=35% Similarity=0.509 Sum_probs=498.7
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+....+......||||++++++.+.+.+++++++++++++... ..+.+| ...++.++++++++
T Consensus 246 ~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~--------~~~~~~--------~~~~~~~v~l~va~ 309 (917)
T COG0474 246 KIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF--------RGGNGL--------LESFLTALALAVAA 309 (917)
T ss_pred HHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hcCccH--------HHHHHHHHHHHHhc
Confidence 55666667767899999999999999999988888777665421 112225 67899999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcC-EEEecCCCCCCCCHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCE-VQYKNIPKYEDIPED 160 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~-~~~~~~~~~~~~~~~ 160 (668)
||+|||+.++++++.++.+|++++++||+++++|+||++++||||||||||+|+|+|+++++.+ ..... +. .....+
T Consensus 310 IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~-~~-~~~~~~ 387 (917)
T COG0474 310 VPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID-DK-DLKDSP 387 (917)
T ss_pred cccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc-cc-ccccch
Confidence 9999999999999999999999999999999999999999999999999999999999999984 11101 00 111122
Q ss_pred HHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCC--ChHHHhhhCCccceeeeeccCCCCceEEE
Q psy11770 161 IASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGK--NYQTVRDDLPEEVFTRVYTFNSVRKSMST 238 (668)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~--~~~~~~~~~~~~~~~~~~~F~s~rk~msv 238 (668)
....+...+++||+... ..+ + ++..|||+|.|+++++.+.|. +....+..+ .+++++||+|+|||||+
T Consensus 388 ~~~~~l~~~~lc~~~~~----~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~---~~~~~~PFdS~rKrMsv 457 (917)
T COG0474 388 ALLRFLLAAALCNSVTP----EKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEY---PILAEIPFDSERKRMSV 457 (917)
T ss_pred HHHHHHHHHHhcCcccc----ccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhc---ceeEEecCCCCceEEEE
Confidence 22345555566665431 112 2 788999999999999999887 555555444 45899999999999999
Q ss_pred EEee-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhccc
Q psy11770 239 VIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHI 317 (668)
Q Consensus 239 vv~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~ 317 (668)
+++. ++++.+++|||||+|+++|+.. ++..+++++.++. +.+..++|+++|||||++|||.++.++.
T Consensus 458 iv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~-~~~~~~~la~~glRvla~A~k~~~~~~~------- 525 (917)
T COG0474 458 IVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRT-LEEAVKELASEGLRVLAVAYKKLDRAEK------- 525 (917)
T ss_pred EEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCcccc-------
Confidence 9985 5669999999999999999975 6667777777766 4688999999999999999997654321
Q ss_pred CCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhh
Q psy11770 318 EGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397 (668)
Q Consensus 318 ~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~ 397 (668)
....+..|+||+|+|+++++||+|++++++|+.|+++||++||+||||.+||++||++||+.......++++|.+
T Consensus 526 -----~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~e 600 (917)
T COG0474 526 -----DDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE 600 (917)
T ss_pred -----cchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHH
Confidence 011156789999999999999999999999999999999999999999999999999999865433256899999
Q ss_pred HHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc
Q psy11770 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG 477 (668)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~ 477 (668)
+... .++++.+.+.+..||||++|+||.++|+.+ |..|++|+|+|||+||+||||+||||||||++|
T Consensus 601 l~~l--------~~~el~~~~~~~~VfARvsP~qK~~IV~~l-----q~~g~vVamtGDGvNDapALk~ADVGIamg~~G 667 (917)
T COG0474 601 LDAL--------SDEELAELVEELSVFARVSPEQKARIVEAL-----QKSGHVVAMTGDGVNDAPALKAADVGIAMGGEG 667 (917)
T ss_pred hhhc--------CHHHHHHHhhhCcEEEEcCHHHHHHHHHHH-----HhCCCEEEEeCCCchhHHHHHhcCccEEecccH
Confidence 9865 455677777778899999999999999997 567999999999999999999999999999889
Q ss_pred cHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHhHH
Q psy11770 478 TDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQD-SPLKAVQMLWVNLIMDTL 556 (668)
Q Consensus 478 ~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~-~~l~~~~~l~~n~~~~~~ 556 (668)
+|++|++||+++.+++|..+..+++|||++|.|+++++.|.+++|+..+++.+++.+++.+ .|++++|++|+|+++|++
T Consensus 668 tdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~ 747 (917)
T COG0474 668 TDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSL 747 (917)
T ss_pred HHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999888888776 899999999999999999
Q ss_pred HHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCC-cccchhhHHH
Q psy11770 557 ASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGS-LPTQHFTIIF 635 (668)
Q Consensus 557 ~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~f 635 (668)
|+++++.++|+.++|+++|+++++++++++.+++|++...++.++++++.|........... .... ......|++|
T Consensus 748 pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~t~~f 824 (917)
T COG0474 748 PALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANT---LGLDLFQALLQTTAF 824 (917)
T ss_pred hhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999998888777776666555543322211111 0001 1345789999
Q ss_pred HHHHHHHHHHHHHhhcccCCccccc-ccccCCC
Q psy11770 636 NTFVLMTLFNEINARKIHGQRNVFE-GLFTTHS 667 (668)
Q Consensus 636 ~~~v~~~~~~~~~~r~~~~~~~~~~-~~~~n~~ 667 (668)
.+++++|+++.+.+|+.+. +++. ++++|++
T Consensus 825 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~n~~ 855 (917)
T COG0474 825 TVLVLIQLLLTLAVRSRGR--PFLSSLLFSNKY 855 (917)
T ss_pred HHHHHHHHHHHHHHhcccc--chhhcccccCHH
Confidence 9999999999999998643 4554 4566654
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-97 Score=871.23 Aligned_cols=626 Identities=54% Similarity=0.811 Sum_probs=510.8
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.++.++.+ ++||+|++++++++++.++++++++++++++++.+.+.... .+..........+...+..++++++++
T Consensus 260 ki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~al~llv~~ 337 (941)
T TIGR01517 260 KLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIR-GDGRDTEEDAQTFLDHFIIAVTIVVVA 337 (941)
T ss_pred HHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-ccccccchhhHHHHHHHHHHHHHHHhh
Confidence 4455555554 56899999999999999988888877776654432222110 010000001124567889999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
||||||+++|++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+.........++..
T Consensus 338 iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 417 (941)
T TIGR01517 338 VPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHV 417 (941)
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998765443221111122334
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.+.+..++.+|+.+... . +.....+..|||+|.|+++++.+.|.+....+..+ +.++.+||+|+||||+++++
T Consensus 418 ~~~l~~~~~~~s~~~~~---~-~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~---~~~~~~pF~s~~k~msvv~~ 490 (941)
T TIGR01517 418 RNILVEGISLNSSSEEV---V-DRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEE---KVVKIYPFNSERKFMSVVVK 490 (941)
T ss_pred HHHHHHHHHhCCCCccc---c-CCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhc---hhccccccCCCCCeEEEEEE
Confidence 44555666666654211 0 11122356799999999999988887766555443 34678999999999999998
Q ss_pred e-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 242 K-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 242 ~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
. ++++++++|||||.|+++|+.++..+|...++++ .+++ +++..++++++|+||+++|||.++.++..
T Consensus 491 ~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~-i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~--------- 559 (941)
T TIGR01517 491 HSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDR-CADVIEPLASDALRTICLAYRDFAPEEFP--------- 559 (941)
T ss_pred eCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHH-HHHHHHHHHhcCCEEEEEEEEecCccccc---------
Confidence 7 4568999999999999999987655677777765 4433 56788999999999999999988643211
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
..+..|+||+|+|+++++|++|++++++|+.|+++||+++|+|||++.||.++|+++||..++. .+++|.++..
T Consensus 560 ----~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~--~vi~G~~~~~ 633 (941)
T TIGR01517 560 ----RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG--LAMEGKEFRR 633 (941)
T ss_pred ----cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc--eEeeHHHhhh
Confidence 1123478999999999999999999999999999999999999999999999999999975543 5789998875
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
+ .++.+++...+..+|||++|+||.++|+.+ |..|++|+|+|||.||+|||++||||||||.+|++.
T Consensus 634 l--------~~~el~~~i~~~~Vfar~sPe~K~~iV~~l-----q~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv 700 (941)
T TIGR01517 634 L--------VYEEMDPILPKLRVLARSSPLDKQLLVLML-----KDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV 700 (941)
T ss_pred C--------CHHHHHHHhccCeEEEECCHHHHHHHHHHH-----HHCCCEEEEECCCCchHHHHHhCCcceecCCCccHH
Confidence 4 456677788888999999999999999997 557899999999999999999999999999889999
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA 560 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~ 560 (668)
|+++||+++.+++|..|.+++++||++|.|+++++.|.+++|+..+++.+++.+++.++|++++|++|+|+++|++|+++
T Consensus 701 Ak~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~ 780 (941)
T TIGR01517 701 AKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALA 780 (941)
T ss_pred HHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHH
Confidence 99999999999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred hcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHH
Q psy11770 561 LATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVL 640 (668)
Q Consensus 561 l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~ 640 (668)
++.++|++++|++||+.++++++++.+|.+|++++++++++.+++++++..+++...+..... .....++|++|++|++
T Consensus 781 l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~~f~~~v~ 859 (941)
T TIGR01517 781 LATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITS-HQQGELNTIVFNTFVL 859 (941)
T ss_pred HccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccc-cccchhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999988887776655554332110000 1134678999999999
Q ss_pred HHHHHHHHhhcccCCcccccccccCCCC
Q psy11770 641 MTLFNEINARKIHGQRNVFEGLFTTHSV 668 (668)
Q Consensus 641 ~~~~~~~~~r~~~~~~~~~~~~~~n~~~ 668 (668)
+|+||.+++|+.+. .++|+++++|+++
T Consensus 860 ~~~~~~~~~r~~~~-~~~~~~~~~n~~~ 886 (941)
T TIGR01517 860 LQLFNEINARKLYE-RNVFEGLFKNRIF 886 (941)
T ss_pred HHHHHHHHHccCCc-ccccccccccHHH
Confidence 99999999998763 4788899999864
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-95 Score=855.43 Aligned_cols=634 Identities=31% Similarity=0.456 Sum_probs=502.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.++.+.++.++||+|+++++++..++.+.++++++++++++..+. .. ..+..|. ..+...+..++++++++
T Consensus 178 ki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~--~~-~~~~~~~----~~~~~~~~~~i~l~v~~ 250 (917)
T TIGR01116 178 KIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFN--DP-ALGGGWI----QGAIYYFKIAVALAVAA 250 (917)
T ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cc-cccchhH----HHHHHHHHHHHhhhhhc
Confidence 56677778888899999999999999988777776665544322110 00 0112232 23456677889999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEE------EecCCC-C
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQ------YKNIPK-Y 154 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~------~~~~~~-~ 154 (668)
||||||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. +..... .
T Consensus 251 iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 330 (917)
T TIGR01116 251 IPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTY 330 (917)
T ss_pred cccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999886531 111000 0
Q ss_pred CC-------------CCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhh----
Q psy11770 155 ED-------------IPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDD---- 217 (668)
Q Consensus 155 ~~-------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~---- 217 (668)
+. ...+..+.+....+.|+.... . .++.+..+...|||+|.|+++++.+.|.+....+..
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~--~-~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~ 407 (917)
T TIGR01116 331 APEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSL--D-FNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRR 407 (917)
T ss_pred CCCccccccCCcccccchHHHHHHHHHHHhcCCCee--e-ccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccc
Confidence 00 011223445555566654321 1 111111233469999999999999888664432110
Q ss_pred ---------CCccceeeeeccCCCCceEEEEEeeCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHH
Q psy11770 218 ---------LPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIE 288 (668)
Q Consensus 218 ---------~~~~~~~~~~~F~s~rk~msvvv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (668)
...+..++++||||+|||||++++.++++.+|+|||||.|+++|++++.++|...+++++.++++ ++.++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i-~~~~~ 486 (917)
T TIGR01116 408 PALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTI-LSVIK 486 (917)
T ss_pred cccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHH-HHHHH
Confidence 11234678899999999999999987889999999999999999988776688888888877664 57789
Q ss_pred HHhh-hcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEc
Q psy11770 289 PMAC-DGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVT 367 (668)
Q Consensus 289 ~~~~-~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~T 367 (668)
+|++ +|+|||++|||.++.++.... ..+....+.+|+||+|+|+++++||+|++++++|+.|+++||+++|+|
T Consensus 487 ~~a~~~GlRvl~~A~k~~~~~~~~~~------~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miT 560 (917)
T TIGR01116 487 EMGTTKALRCLALAFKDIPDPREEDL------LSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMIT 560 (917)
T ss_pred HHHhhcCCeEEEEEEEECCccccccc------cccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEec
Confidence 9999 999999999999865321110 001112356789999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCccCCCce--EEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcC
Q psy11770 368 GDNINTARSIATKCGIVKPGEDY--LILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKIS 445 (668)
Q Consensus 368 Gd~~~ta~~ia~~~gi~~~~~~~--i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~ 445 (668)
||+.+||.++|+++|+..++.+. ..++|.++..+ .++...+...+..+|||++|+||.++|+.+ |
T Consensus 561 GD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~--------~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l-----q 627 (917)
T TIGR01116 561 GDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM--------GPAKQRAACRSAVLFSRVEPSHKSELVELL-----Q 627 (917)
T ss_pred CCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC--------CHHHHHHhhhcCeEEEecCHHHHHHHHHHH-----H
Confidence 99999999999999998655432 46788877643 334556666778899999999999999986 5
Q ss_pred CCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 446 AGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVA 525 (668)
Q Consensus 446 ~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~ 525 (668)
..+++|+|+|||.||+|||++|||||||| +|++.+|++||+++.+|+|..+.++++|||++|.|+++++.|.+++|+..
T Consensus 628 ~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~ 706 (917)
T TIGR01116 628 EQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGE 706 (917)
T ss_pred hcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 57899999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy11770 526 VIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGI 605 (668)
Q Consensus 526 ~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (668)
+++.+++.+++.+.|++++|++|+|+++|++|+++++.++|++++|++||+.+++++++++++++|++.+++++++.++.
T Consensus 707 ~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~ 786 (917)
T TIGR01116 707 VVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGG 786 (917)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888889999999999999999999999999999999999999999999999999999999999999875544
Q ss_pred HHhhccccCCCC-------CCC-CCC-----CCcccchhhHHHHHHHHHHHHHHHHhhcccCCccccc-ccccCCCC
Q psy11770 606 LFFGDKLLDIPT-------GRG-AEY-----GSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTTHSV 668 (668)
Q Consensus 606 ~~~~~~~~~~~~-------~~~-~~~-----~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~-~~~~n~~~ 668 (668)
+++.....+... +.. .+. ......++|++|++|+++|+||.|+||+.+ .++|. ++|+|+++
T Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~~n~~~ 861 (917)
T TIGR01116 787 FVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSED--QSLLRMPPWVNKWL 861 (917)
T ss_pred HHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCc--ccccccCCccCHHH
Confidence 433211111100 000 000 002346789999999999999999999964 47786 78899864
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-95 Score=856.82 Aligned_cols=600 Identities=29% Similarity=0.441 Sum_probs=472.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhccCchHHHHHHH
Q psy11770 14 KSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVPEGLPLAVTLS 93 (668)
Q Consensus 14 ~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~iP~~Lp~~~~~~ 93 (668)
+||||++++++++.++.++++++++++++.. + ..| ...++++++++++++|+|||++++++
T Consensus 272 ~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-------~----~~~--------~~~~~~av~l~Va~VPegLp~~vti~ 332 (1053)
T TIGR01523 272 GTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-------F----DVD--------KEVAIYAICLAISIIPESLIAVLSIT 332 (1053)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-------h----hhh--------HHHHHHHHHHHHHHcccchHHHHHHH
Confidence 5999999999999988887777766554211 0 011 34567789999999999999999999
Q ss_pred HHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCE-EEecC-------CC--C---------
Q psy11770 94 LAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEV-QYKNI-------PK--Y--------- 154 (668)
Q Consensus 94 l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~-~~~~~-------~~--~--------- 154 (668)
++++++||+++|++||+++++|+||++++||+|||||||+|+|+|+++|..+. .+... +. .
T Consensus 333 La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 412 (1053)
T TIGR01523 333 MAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSP 412 (1053)
T ss_pred HHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999998641 22110 00 0
Q ss_pred ---------------------C--C-C---CHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHc
Q psy11770 155 ---------------------E--D-I---PEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAI 207 (668)
Q Consensus 155 ---------------------~--~-~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~ 207 (668)
. + . ..+..+.+.....+|+... .. .++.+..+...|||+|.||+.++.+.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~--~~-~~~~~~~~~~~GdptE~ALl~~a~~~ 489 (1053)
T TIGR01523 413 YEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIAT--VF-KDDATDCWKAHGDPTEIAIHVFAKKF 489 (1053)
T ss_pred ccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCe--ee-ccCCCCceeeCcCccHHHHHHHHHHc
Confidence 0 0 0 0012233455444454322 11 11112234567999999999999988
Q ss_pred CCChH------HHhhh----------------CCccceeeeeccCCCCceEEEEEeeC-C-eEEEEEcCchHHHHhhccc
Q psy11770 208 GKNYQ------TVRDD----------------LPEEVFTRVYTFNSVRKSMSTVIPKK-N-GYRVYTKGASEIILKKCSY 263 (668)
Q Consensus 208 g~~~~------~~~~~----------------~~~~~~~~~~~F~s~rk~msvvv~~~-~-~~~~~~KGa~e~il~~c~~ 263 (668)
|.+.. ..+.. ...+..++++||+|+||||+++++++ + ++++|+|||||.|+++|+.
T Consensus 490 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~ 569 (1053)
T TIGR01523 490 DLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSS 569 (1053)
T ss_pred CCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhH
Confidence 86421 12111 11245688999999999999999863 3 5889999999999999997
Q ss_pred ccccCC-ccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeec
Q psy11770 264 IYGRNG-HLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIE 342 (668)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~ 342 (668)
....+| +..+++++.++++ .+..++|+++|+|||++|||.++.++...+ ..+. ....++.+|+||+|+|+++++
T Consensus 570 ~~~~~~~~~~~l~~~~~~~i-~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~--~~~~~~~~e~~L~~~G~~~~~ 644 (1053)
T TIGR01523 570 SNGKDGVKISPLEDCDRELI-IANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN--ETLNRATAESDLEFLGLIGIY 644 (1053)
T ss_pred hhcCCCCccccCCHHHHHHH-HHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc--cccchhhhccCCEEEEEEeee
Confidence 655444 5677888877664 577899999999999999999875432111 0000 011234578999999999999
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCC--------ceEEeehhhHHHhhhcCchhhhHHHH
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE--------DYLILEGKEFNRRVRDNNGEVQQNLL 414 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~--------~~i~~~g~~~~~~~~~~~~~~~~~~l 414 (668)
||+|++++++|+.|+++||++||+|||++.||.++|+++||..++. ...+++|.++..+ .++.+
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l--------~~~~l 716 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL--------SDEEV 716 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhc--------CHHHH
Confidence 9999999999999999999999999999999999999999975421 2368899888754 34556
Q ss_pred hhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCc
Q psy11770 415 DKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNF 494 (668)
Q Consensus 415 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~ 494 (668)
++...+..||||++|+||.++|+.+ |..|++|+|+|||.||+|||++||||||||.+|++.++++||+++.+++|
T Consensus 717 ~~~~~~~~V~ar~sP~~K~~iV~~l-----q~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 717 DDLKALCLVIARCAPQTKVKMIEAL-----HRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred HHHhhcCeEEEecCHHHHHHHHHHH-----HhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 6667778899999999999999997 55689999999999999999999999999988999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----C-CCchhHHHHHHHHHHHhHHHHHHhcccCCCcc
Q psy11770 495 SSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAV----Q-DSPLKAVQMLWVNLIMDTLASLALATEMPTPD 569 (668)
Q Consensus 495 ~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~----~-~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~ 569 (668)
..|.+++.|||++|+|+++++.|.+++|+..+++.+++.++. . +.||+++|+||+|+++|.+|+++|+.|+|+++
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999999999988887763 2 47899999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccc--CC---C--CCCCCCCCCcccchhhHHHHHHHHHH
Q psy11770 570 LLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLL--DI---P--TGRGAEYGSLPTQHFTIIFNTFVLMT 642 (668)
Q Consensus 570 l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~--~~~~~~~~~~~~~~~t~~f~~~v~~~ 642 (668)
+|++||+.++++++++.++..++..+++++++.+..+++....+ +. . ..++.+. ....+++|++|.+++++|
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~t~~f~~l~~~~ 950 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGC-NDVFKARSAAFATMTFCA 950 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccc-cchhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999988776665443211100 00 0 0000000 023467899999999999
Q ss_pred HHHHHHhhcccC
Q psy11770 643 LFNEINARKIHG 654 (668)
Q Consensus 643 ~~~~~~~r~~~~ 654 (668)
++|.|+||+.+.
T Consensus 951 ~~~~~~~r~~~~ 962 (1053)
T TIGR01523 951 LILAVEVKDFDN 962 (1053)
T ss_pred HHHHHHHhcCch
Confidence 999999998754
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-94 Score=851.80 Aligned_cols=623 Identities=28% Similarity=0.395 Sum_probs=490.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++.+.+++|+|+.+++++..+..+++++++++++++.. .+..| ...+.+++++++++
T Consensus 243 ~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--------~~~~~~~i~v~v~~ 305 (997)
T TIGR01106 243 RIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---------LGYTW--------LEAVIFLIGIIVAN 305 (997)
T ss_pred HHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hcCCH--------HHHHHHHHHHHhhc
Confidence 44555666777789999999999999988877766655443321 12344 45677889999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCC------C
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKY------E 155 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~------~ 155 (668)
||||||++++++++.++++|+++|++||+++++|+||++++||||||||||+|+|+|.++++++..+...... .
T Consensus 306 iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 385 (997)
T TIGR01106 306 VPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSF 385 (997)
T ss_pred CCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999988766532110 0
Q ss_pred CCCHHHHHHHHHHHhhcCCCCcccccCCCC--CCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCC
Q psy11770 156 DIPEDIASKIVEGISVNSGYTSKIMAPENA--NELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVR 233 (668)
Q Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~r 233 (668)
..+....+.+...+++|+.... ....+. ...++..|||+|.|+++++.+.+.+....+..++ .+.++||+|+|
T Consensus 386 ~~~~~~~~~ll~~~alcn~~~~--~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~---~v~~~pF~s~r 460 (997)
T TIGR01106 386 DKSSATWLALSRIAGLCNRAVF--KAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNP---KVVEIPFNSTN 460 (997)
T ss_pred CcccHHHHHHHHHHHHcCCCee--ccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCc---eeEEeccCCCC
Confidence 1111233345556666654321 111000 0123567999999999999876665555555443 47789999999
Q ss_pred ceEEEEEee----CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccch
Q psy11770 234 KSMSTVIPK----KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDK 309 (668)
Q Consensus 234 k~msvvv~~----~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~ 309 (668)
|||++++.. ++++++|+|||||.|+++|++++ .+|+..+++++.++. +++..++|+++|+||+++|||.++.++
T Consensus 461 K~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~-~~~~~~~~a~~GlRvla~A~k~l~~~~ 538 (997)
T TIGR01106 461 KYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEA-FQNAYLELGGLGERVLGFCHLYLPDEQ 538 (997)
T ss_pred ceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHH-HHHHHHHHHhcCCEEEEEEEeecCccc
Confidence 999998863 24688999999999999999876 467778888877665 467889999999999999999987543
Q ss_pred hhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCc
Q psy11770 310 AEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED 389 (668)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~ 389 (668)
+.... .++ .++.+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.+|.++|+++|++.++..
T Consensus 539 ~~~~~-~~~----~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~ 613 (997)
T TIGR01106 539 FPEGF-QFD----TDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 613 (997)
T ss_pred ccccc-ccc----chhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcc
Confidence 21100 000 0111234889999999999999999999999999999999999999999999999999999754321
Q ss_pred ----------------------eEEeehhhHHHhhhcCchhhhHHHHhhhcCCc--EEEEecCHhhHHHHHHHHHHhhcC
Q psy11770 390 ----------------------YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL--RVLARSSPSDKYTLVKGMIDSKIS 445 (668)
Q Consensus 390 ----------------------~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~--~v~~r~~p~~K~~iv~~l~~~~~~ 445 (668)
..+++|.+++.+ .++.+++...+. .||||++|+||.++|+.+ |
T Consensus 614 ~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l--------~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~l-----q 680 (997)
T TIGR01106 614 TVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM--------TSEQLDEILKYHTEIVFARTSPQQKLIIVEGC-----Q 680 (997)
T ss_pred chhhhhhhccccccccccccccceEEEhHHhhhC--------CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHH-----H
Confidence 257888888754 334555555543 499999999999999997 5
Q ss_pred CCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 446 AGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVA 525 (668)
Q Consensus 446 ~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~ 525 (668)
..|++|+|+|||.||+||||+||||||||.+|++.++++||+++.+|+|+.+.++++|||++|.|+++++.|.+++|+..
T Consensus 681 ~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~ 760 (997)
T TIGR01106 681 RQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPE 760 (997)
T ss_pred HCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 67899999999999999999999999999779999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCC-CCCCCCHHHHHHHHH-HHHHHHHHHH
Q psy11770 526 VIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR-TKALISKTMMKNIIG-QAIYQLVIIF 603 (668)
Q Consensus 526 ~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 603 (668)
+++.+++.++..++|++++|++|+|+++|++|+++++.|+|++++|+++|+.+ .++++++.++..+++ .+++++++.|
T Consensus 761 ~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~ 840 (997)
T TIGR01106 761 ITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGF 840 (997)
T ss_pred HHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999874 678999988877654 4777776665
Q ss_pred HHHHhhcc--------ccCCCCCC------------CCCCCCc-----ccchhhHHHHHHHHHHHHHHHHhhcccCCccc
Q psy11770 604 GILFFGDK--------LLDIPTGR------------GAEYGSL-----PTQHFTIIFNTFVLMTLFNEINARKIHGQRNV 658 (668)
Q Consensus 604 ~~~~~~~~--------~~~~~~~~------------~~~~~~~-----~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~ 658 (668)
+.+++... .+++...+ +..+... ...++|++|.+++++|+||.++||+.+ .++
T Consensus 841 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~--~~~ 918 (997)
T TIGR01106 841 FTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRR--NSV 918 (997)
T ss_pred HHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCc--ccc
Confidence 54443211 11110000 0000000 014689999999999999999999854 377
Q ss_pred ccccccCCCC
Q psy11770 659 FEGLFTTHSV 668 (668)
Q Consensus 659 ~~~~~~n~~~ 668 (668)
|++.++|+++
T Consensus 919 f~~~~~n~~l 928 (997)
T TIGR01106 919 FQQGMKNKIL 928 (997)
T ss_pred cccCCcCHHH
Confidence 8655888753
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-91 Score=817.48 Aligned_cols=585 Identities=32% Similarity=0.525 Sum_probs=482.1
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++.+.++||+|+.++++++++..++++++++++++. ++ .+.+| ...+..++++++++
T Consensus 223 ki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~--~~-------~~~~~--------~~~~~~~v~llv~a 285 (884)
T TIGR01522 223 AVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVG--WF-------QGKDW--------LEMFTISVSLAVAA 285 (884)
T ss_pred HHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-------hcCCH--------HHHHHHHHHHHHHH
Confidence 455666777778999999999999998877665544333321 11 12334 56788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecC------CCCC
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNI------PKYE 155 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~ 155 (668)
||||||+++|++++.+.+||+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+... +...
T Consensus 286 iP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~ 365 (884)
T TIGR01522 286 IPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGE 365 (884)
T ss_pred ccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999866432110 0000
Q ss_pred ---------CCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeee
Q psy11770 156 ---------DIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRV 226 (668)
Q Consensus 156 ---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (668)
.........++...+.|++... .. .+ ....|||+|.|+++++.+.|.+ ..+.. +..+++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~--~~--~~~~g~p~e~All~~~~~~~~~--~~~~~---~~~~~~ 433 (884)
T TIGR01522 366 VIVDGDVLHGFYTVAVSRILEAGNLCNNAKF---RN--EA--DTLLGNPTDVALIELLMKFGLD--DLRET---YIRVAE 433 (884)
T ss_pred ccccccccccccCHHHHHHHHHHhhhCCCee---cC--CC--CCcCCChHHHHHHHHHHHcCcH--hHHhh---CcEEeE
Confidence 0001112233333333433210 00 11 1245899999999999887653 22222 335788
Q ss_pred eccCCCCceEEEEEee--CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEee
Q psy11770 227 YTFNSVRKSMSTVIPK--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKD 304 (668)
Q Consensus 227 ~~F~s~rk~msvvv~~--~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~ 304 (668)
+||+|+||||+++++. ++++++++|||||.|+++|+.++..+|...+++++.+++ +++..++++++|+||+++||+.
T Consensus 434 ~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~-i~~~~~~~a~~G~rvl~~A~~~ 512 (884)
T TIGR01522 434 VPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDV-IQEEAAEMASAGLRVIAFASGP 512 (884)
T ss_pred eCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHH-HHHHHHHHHhcCCEEEEEEEEc
Confidence 9999999999999876 677899999999999999998876667777888776665 4577889999999999999986
Q ss_pred cccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy11770 305 FVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 305 l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 384 (668)
+ +++|+|+|+++++|++||+++++|+.|+++||+++|+|||+..||.++|+++|+.
T Consensus 513 ~------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 513 E------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred C------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 4 2478999999999999999999999999999999999999999999999999997
Q ss_pred cCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHH
Q psy11770 385 KPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPAL 464 (668)
Q Consensus 385 ~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~ml 464 (668)
...+. .++|.++... .++.+++.+.+..+|||++|+||.++|+.+ |..|+.|+|+|||.||+|||
T Consensus 569 ~~~~~--~v~g~~l~~~--------~~~~l~~~~~~~~Vfar~~P~~K~~iv~~l-----q~~g~~v~mvGDGvND~pAl 633 (884)
T TIGR01522 569 SKTSQ--SVSGEKLDAM--------DDQQLSQIVPKVAVFARASPEHKMKIVKAL-----QKRGDVVAMTGDGVNDAPAL 633 (884)
T ss_pred CCCCc--eeEhHHhHhC--------CHHHHHHHhhcCeEEEECCHHHHHHHHHHH-----HHCCCEEEEECCCcccHHHH
Confidence 65443 5688887653 456677778889999999999999999997 55689999999999999999
Q ss_pred hhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHH
Q psy11770 465 KKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAV 544 (668)
Q Consensus 465 k~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~ 544 (668)
++|||||+||.+|++.++++||+++.+|+|..+.+++++||++|+|+++++.|.++.|+..+++.+++.+++.+.|++++
T Consensus 634 ~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~ 713 (884)
T TIGR01522 634 KLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAM 713 (884)
T ss_pred HhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHH
Confidence 99999999996799999999999999999999999999999999999999999999999999888888888899999999
Q ss_pred HHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCC
Q psy11770 545 QMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYG 624 (668)
Q Consensus 545 ~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (668)
|++|+|+++|.+|+++++.|+|++++|++||++++++++++.++.+|++++++++++.++++++.. . .+
T Consensus 714 qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~---~~------ 782 (884)
T TIGR01522 714 QILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREM--Q---DG------ 782 (884)
T ss_pred HHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHH--c---CC------
Confidence 999999999999999999999999999999999999999999999999999998877665544321 1 11
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHhhcccCCccccc-ccccCCCC
Q psy11770 625 SLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTTHSV 668 (668)
Q Consensus 625 ~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~-~~~~n~~~ 668 (668)
.....++|++|++|+++|+||.+++|+.+ .++|+ ++++|+++
T Consensus 783 ~~~~~~~t~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~~n~~~ 825 (884)
T TIGR01522 783 VITARDTTMTFTCFVFFDMFNALACRSQT--KSVFEIGFFSNRMF 825 (884)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHccCC--ccccccCcccCHHH
Confidence 01235689999999999999999999864 47786 78899864
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-87 Score=779.69 Aligned_cols=559 Identities=21% Similarity=0.301 Sum_probs=446.4
Q ss_pred cccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhc
Q psy11770 3 PVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAV 82 (668)
Q Consensus 3 ~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~i 82 (668)
+.+..++ ++.+||+|++++++++.+..++.+++.+++++..+ ...+| ...+.+++++++++|
T Consensus 270 I~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~---------~~~~~--------~~~l~~aisl~V~~~ 331 (903)
T PRK15122 270 LAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF---------TKGDW--------LEALLFALAVAVGLT 331 (903)
T ss_pred HHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh---------ccCCH--------HHHHHHHHHHHHHHc
Confidence 4444444 55679999999999998887766555443332211 12234 567888999999999
Q ss_pred cCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHHH
Q psy11770 83 PEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIA 162 (668)
Q Consensus 83 P~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 162 (668)
|||||++++++++.|+.+|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+. ..+++
T Consensus 332 Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~---------~~~~~-- 400 (903)
T PRK15122 332 PEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG---------RKDER-- 400 (903)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC---------CChHH--
Confidence 9999999999999999999999999999999999999999999999999999999998763221 01111
Q ss_pred HHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEee
Q psy11770 163 SKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK 242 (668)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~ 242 (668)
+......|+.+ ....+||+|.|+++++.+.+.. ..+.. +...+++||+|.||+|+++++.
T Consensus 401 --~l~~a~l~s~~-------------~~~~~~p~e~All~~a~~~~~~--~~~~~---~~~~~~~pF~s~~k~ms~v~~~ 460 (903)
T PRK15122 401 --VLQLAWLNSFH-------------QSGMKNLMDQAVVAFAEGNPEI--VKPAG---YRKVDELPFDFVRRRLSVVVED 460 (903)
T ss_pred --HHHHHHHhCCC-------------CCCCCChHHHHHHHHHHHcCch--hhhhc---CceEEEeeeCCCcCEEEEEEEc
Confidence 22222222211 0125799999999999876542 11122 3346789999999999999987
Q ss_pred -CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 243 -KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 243 -~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
++++++++|||||.++++|++... +|...+++++.++++ .+..++++++|+|++++|||.++.++...
T Consensus 461 ~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i-~~~~~~~a~~G~rvlavA~k~~~~~~~~~--------- 529 (903)
T PRK15122 461 AQGQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERL-LALAEAYNADGFRVLLVATREIPGGESRA--------- 529 (903)
T ss_pred CCCcEEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHH-HHHHHHHHhCCCEEEEEEEeccCcccccc---------
Confidence 677889999999999999997653 566677887766654 56788999999999999999876432100
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
..++..|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||.. + -+++|.++..+
T Consensus 530 --~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~--~vi~G~el~~~ 603 (903)
T PRK15122 530 --QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--G--EPLLGTEIEAM 603 (903)
T ss_pred --ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--C--CccchHhhhhC
Confidence 01123468999999999999999999999999999999999999999999999999999942 2 26788888754
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
+++.+.+...+..+|||++|+||.++|+.+ |..|++|+|+|||.||+|||++|||||||| +|++.|
T Consensus 604 --------~~~el~~~v~~~~VfAr~sPe~K~~iV~~L-----q~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvA 669 (903)
T PRK15122 604 --------DDAALAREVEERTVFAKLTPLQKSRVLKAL-----QANGHTVGFLGDGINDAPALRDADVGISVD-SGADIA 669 (903)
T ss_pred --------CHHHHHHHhhhCCEEEEeCHHHHHHHHHHH-----HhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHH
Confidence 556778888888999999999999999997 567999999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHh
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLAL 561 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l 561 (668)
|++||+++.+|+|..|.+++++||++|+|++|++.|.++.|+..++..+++.++..+.|+++.|++|+|+++|. |++++
T Consensus 670 keaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal 748 (903)
T PRK15122 670 KESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSL 748 (903)
T ss_pred HHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhh
Confidence 99999999999999999999999999999999999999999998888777777766789999999999999995 99999
Q ss_pred cccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHHH
Q psy11770 562 ATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLM 641 (668)
Q Consensus 562 ~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~ 641 (668)
+.|||++++| ++|++++++++++.++. +...+.+.++..|++.++.. .. +. . . .....+|+.|.+++++
T Consensus 749 ~~d~~~~~~m-~~P~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~---~~--~~-~--~-~~~~~~t~~f~~l~~~ 817 (903)
T PRK15122 749 PWDKMDKEFL-RKPRKWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVF---AA--NS-V--E-MQALFQSGWFIEGLLS 817 (903)
T ss_pred cCCCCCHhhc-CCCCCCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHh---cc--Cc-H--h-hhhhhHHHHHHHHHHH
Confidence 9999999999 99999999999987664 22222223333333322211 10 10 0 0 0012357889999999
Q ss_pred HHHHHHHhhccc
Q psy11770 642 TLFNEINARKIH 653 (668)
Q Consensus 642 ~~~~~~~~r~~~ 653 (668)
|++|.|++|+.+
T Consensus 818 q~~~~~~~R~~~ 829 (903)
T PRK15122 818 QTLVVHMLRTQK 829 (903)
T ss_pred HHHHHHhhCcCC
Confidence 999999999864
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-87 Score=775.87 Aligned_cols=559 Identities=22% Similarity=0.304 Sum_probs=441.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++++.++||+|+.++++++.+..++++++.+++++... .+.+| ...+.+++++++++
T Consensus 270 kI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---------~~~~~--------~~~l~~alsv~V~~ 332 (902)
T PRK10517 270 QLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---------TKGDW--------WEAALFALSVAVGL 332 (902)
T ss_pred HHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---------hcCCH--------HHHHHHHHHHHHHH
Confidence 45566777778899999999999999888777666554433211 12234 46788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
||||||++++++++.|+++|+|+|++||+++++|+||++|+||||||||||+|+|+|.++.... ..+.
T Consensus 333 ~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~----------~~~~-- 400 (902)
T PRK10517 333 TPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS----------GKTS-- 400 (902)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC----------CCCH--
Confidence 9999999999999999999999999999999999999999999999999999999998764210 0111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+......|+.+. ...+||+|.|++.++...+ ....... +...+++||+|+||||+++++
T Consensus 401 -~~ll~~a~l~~~~~-------------~~~~~p~d~All~~a~~~~--~~~~~~~---~~~~~~~pFds~~k~msvvv~ 461 (902)
T PRK10517 401 -ERVLHSAWLNSHYQ-------------TGLKNLLDTAVLEGVDEES--ARSLASR---WQKIDEIPFDFERRRMSVVVA 461 (902)
T ss_pred -HHHHHHHHhcCCcC-------------CCCCCHHHHHHHHHHHhcc--hhhhhhc---CceEEEeeeCCCcceEEEEEE
Confidence 12233333333211 1247999999999886533 1112222 234678999999999999987
Q ss_pred e-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 242 K-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 242 ~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
. ++++.+++|||||.|+++|+.+.. +|...+++++.+++ +.+..++++++|+||+++|||+++.++.
T Consensus 462 ~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~-i~~~~~~~a~~G~rvlavA~k~~~~~~~---------- 529 (902)
T PRK10517 462 ENTEHHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRR-IKRVTDTLNRQGLRVVAVATKYLPAREG---------- 529 (902)
T ss_pred ECCCeEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHH-HHHHHHHHHhcCCEEEEEEEecCCcccc----------
Confidence 6 566889999999999999998754 56667788776665 4577889999999999999998764321
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
.. +...|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||.. + -+++|.+++.
T Consensus 530 -~~--~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~--~v~~G~el~~ 602 (902)
T PRK10517 530 -DY--QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--G--EVLIGSDIET 602 (902)
T ss_pred -cc--ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--c--CceeHHHHHh
Confidence 00 111368999999999999999999999999999999999999999999999999999942 2 3678988875
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
+ +++.+++.+.+..+|+|++|+||.++|+.+ |..|++|+|+|||.||+|||++|||||||| +|++.
T Consensus 603 l--------~~~el~~~~~~~~VfAr~sPe~K~~IV~~L-----q~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdv 668 (902)
T PRK10517 603 L--------SDDELANLAERTTLFARLTPMHKERIVTLL-----KREGHVVGFMGDGINDAPALRAADIGISVD-GAVDI 668 (902)
T ss_pred C--------CHHHHHHHHhhCcEEEEcCHHHHHHHHHHH-----HHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHH
Confidence 4 456778888888999999999999999997 567999999999999999999999999999 99999
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA 560 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~ 560 (668)
||++||+++.+++|..|.+++++||++|+|++|++.|.++.|+..++..+++.++..+.|++|.|+||+|+++| +|+++
T Consensus 669 AkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~a 747 (902)
T PRK10517 669 AREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVA 747 (902)
T ss_pred HHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHh
Confidence 99999999999999999999999999999999999999999999998888777776568999999999999999 78999
Q ss_pred hcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHH
Q psy11770 561 LATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVL 640 (668)
Q Consensus 561 l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~ 640 (668)
++.|+|++++|++||+.. ... ....++..+++.+++.+..+++....++... + ......++..|.++++
T Consensus 748 l~~d~~~~~~m~~p~r~~-~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~F~~~~~ 816 (902)
T PRK10517 748 IPFDNVDDEQIQKPQRWN-PAD----LGRFMVFFGPISSIFDILTFCLMWWVFHANT----P--ETQTLFQSGWFVVGLL 816 (902)
T ss_pred hcCCCCChhhhcCCCCCC-HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHccccc----h--hhHhHHHHHHHHHHHH
Confidence 999999999999988622 212 3333444555544433332222211111100 0 0001233456999999
Q ss_pred HHHHHHHHhhccc
Q psy11770 641 MTLFNEINARKIH 653 (668)
Q Consensus 641 ~~~~~~~~~r~~~ 653 (668)
+|+++.+++|+.+
T Consensus 817 ~q~~~~~~~R~~~ 829 (902)
T PRK10517 817 SQTLIVHMIRTRR 829 (902)
T ss_pred HHHHHHHhhccCC
Confidence 9999999999854
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-86 Score=766.90 Aligned_cols=558 Identities=22% Similarity=0.295 Sum_probs=440.1
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++ +.++||+|+.++++++.+..+++++++++++++.+ .+.+| ...+.+++++++++
T Consensus 236 ki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---------~~~~~--------~~~~~~al~l~v~~ 297 (867)
T TIGR01524 236 SLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---------MKGDW--------LEAFLFALAVAVGL 297 (867)
T ss_pred HHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---------hcCCH--------HHHHHHHHHHHHHh
Confidence 45555666 66689999999999999988877766655443211 12234 46788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
||||||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+. ...
T Consensus 298 iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~----------~~~-- 365 (867)
T TIGR01524 298 TPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG----------ETS-- 365 (867)
T ss_pred CcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC----------CCH--
Confidence 99999999999999999999999999999999999999999999999999999999998752111 111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+.....+|+... ...+||.|.|+++++.+.. ....+.. +...+.+||+|+||||+++++
T Consensus 366 -~~~l~~a~l~~~~~-------------~~~~~p~~~Al~~~~~~~~--~~~~~~~---~~~~~~~pF~s~~k~ms~~v~ 426 (867)
T TIGR01524 366 -ERVLKMAWLNSYFQ-------------TGWKNVLDHAVLAKLDESA--ARQTASR---WKKVDEIPFDFDRRRLSVVVE 426 (867)
T ss_pred -HHHHHHHHHhCCCC-------------CCCCChHHHHHHHHHHhhc--hhhHhhc---CceEEEeccCCCcCEEEEEEE
Confidence 12222223332210 1135899999999886532 1122222 334678999999999999988
Q ss_pred e-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 242 K-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 242 ~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
+ ++.+++++|||||.++++|+.+.. +|...+++++.+++ +++..++++++|+|++++|||+++.++.+
T Consensus 427 ~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~-i~~~~~~~a~~G~rvlavA~~~~~~~~~~--------- 495 (867)
T TIGR01524 427 NRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSE-LQDMTAEMNRQGIRVIAVATKTLKVGEAD--------- 495 (867)
T ss_pred cCCceEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHH-HHHHHHHHHhcCCEEEEEEEeccCccccc---------
Confidence 6 345789999999999999987643 56667787776665 45778999999999999999987653210
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
. .+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||... -+++|.++..
T Consensus 496 --~--~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----~v~~g~~l~~ 567 (867)
T TIGR01524 496 --F--TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGADIEE 567 (867)
T ss_pred --c--cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----CeeecHhhhh
Confidence 0 1112679999999999999999999999999999999999999999999999999999532 2678888765
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
+ +++.+.+...+..+|+|++|+||.++|+.+ |..|++|+|+|||.||+|||++|||||||| +|++.
T Consensus 568 ~--------~~~el~~~~~~~~vfAr~~Pe~K~~iV~~l-----q~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdv 633 (867)
T TIGR01524 568 L--------SDEELARELRKYHIFARLTPMQKSRIIGLL-----KKAGHTVGFLGDGINDAPALRKADVGISVD-TAADI 633 (867)
T ss_pred C--------CHHHHHHHhhhCeEEEECCHHHHHHHHHHH-----HhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHH
Confidence 3 456677788888999999999999999997 567999999999999999999999999999 99999
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA 560 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~ 560 (668)
||++||+++.+++|..|.+++++||++|+|+++++.|.++.|+..++..+++.++..+.|+++.|++|+|+++| +|+++
T Consensus 634 Ak~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~a 712 (867)
T TIGR01524 634 AKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLT 712 (867)
T ss_pred HHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHh
Confidence 99999999999999999999999999999999999999999999988888777776668999999999999999 79999
Q ss_pred hcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHH
Q psy11770 561 LATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVL 640 (668)
Q Consensus 561 l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~ 640 (668)
++.|+|++++|++||+ ++++. ....++..+++.+++.+..++.....+... + . ......+|..|.++++
T Consensus 713 l~~~~~~~~~m~~p~~-~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~----~-~~~~~~~t~~f~~~~~ 781 (867)
T TIGR01524 713 LPWDKMDREFLKKPHQ-WEQKG----MGRFMLCIGPVSSIFDIATFLLMWFVFSAN-T----V-EEQALFQSGWFVVGLL 781 (867)
T ss_pred hcCCCCChHhhCCCCC-CChhh----HHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c----h-hhhhHHHHHHHHHHHH
Confidence 9999999999976554 55543 333344455544433332222211111100 0 0 0011236888999999
Q ss_pred HHHHHHHHhhccc
Q psy11770 641 MTLFNEINARKIH 653 (668)
Q Consensus 641 ~~~~~~~~~r~~~ 653 (668)
+|++|.+++|+.+
T Consensus 782 ~~~~~~~~~R~~~ 794 (867)
T TIGR01524 782 SQTLVVHMIRTEK 794 (867)
T ss_pred HHHHHHHhhCcCC
Confidence 9999999999864
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-86 Score=782.74 Aligned_cols=599 Identities=20% Similarity=0.254 Sum_probs=452.9
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+++.....++..+++++...++...+..+++++++++++. +. ..+.+| ...++.++++++++
T Consensus 347 ~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~----~~-----~~~~~~--------~~~~l~~l~iiv~~ 409 (1054)
T TIGR01657 347 QLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE----LI-----KDGRPL--------GKIILRSLDIITIV 409 (1054)
T ss_pred HHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH----HH-----HcCCcH--------HHHHHHHHHHHHhh
Confidence 45566666677789999999988776654443322221111 10 123344 56788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||+++++++++|+.||+|+|++|++++++|++|++|++|||||||||+|+|+|.+++..+..........+...+.
T Consensus 410 vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~ 489 (1054)
T TIGR01657 410 VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLK 489 (1054)
T ss_pred cCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999987543211000000000012
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCC-hH-HHhh----------hCCccceeeeecc
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKN-YQ-TVRD----------DLPEEVFTRVYTF 229 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~-~~-~~~~----------~~~~~~~~~~~~F 229 (668)
...+...++.||+... . ++ ...|||+|.|+++++...... .. .... ....+.+++++||
T Consensus 490 ~~~~~~~~a~C~~~~~--~----~~---~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF 560 (1054)
T TIGR01657 490 PSITHKALATCHSLTK--L----EG---KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQF 560 (1054)
T ss_pred chHHHHHHHhCCeeEE--E----CC---EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEee
Confidence 2334556667765431 1 11 457999999999976321000 00 0000 0134567899999
Q ss_pred CCCCceEEEEEee--CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeeccc
Q psy11770 230 NSVRKSMSTVIPK--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVT 307 (668)
Q Consensus 230 ~s~rk~msvvv~~--~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~ 307 (668)
+|++|||||+++. ++++++|+|||||.|+++|+.. . . ++.+++.+++|+++|+|||++|||++++
T Consensus 561 ~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~----~----~-----p~~~~~~~~~~a~~G~RVLalA~k~l~~ 627 (1054)
T TIGR01657 561 SSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE----T----V-----PSDYQEVLKSYTREGYRVLALAYKELPK 627 (1054)
T ss_pred cCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc----C----C-----ChhHHHHHHHHHhcCCEEEEEEEeecCc
Confidence 9999999999987 3567899999999999999731 1 1 1225577899999999999999999864
Q ss_pred chhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q psy11770 308 DKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG 387 (668)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~ 387 (668)
.+.+.. ...+++++|+||+|+|+++++|++||+++++|+.|+++||+++|+|||++.||.++|+++||+.++
T Consensus 628 ~~~~~~--------~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~ 699 (1054)
T TIGR01657 628 LTLQKA--------QDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPS 699 (1054)
T ss_pred cchhhh--------hhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC
Confidence 321110 012356789999999999999999999999999999999999999999999999999999997654
Q ss_pred Cce---------------------------------------------------EEeehhhHHHhhhcCchhhhHHHHhh
Q psy11770 388 EDY---------------------------------------------------LILEGKEFNRRVRDNNGEVQQNLLDK 416 (668)
Q Consensus 388 ~~~---------------------------------------------------i~~~g~~~~~~~~~~~~~~~~~~l~~ 416 (668)
+.. ++++|+++..... ..++.+.+
T Consensus 700 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~-----~~~~~l~~ 774 (1054)
T TIGR01657 700 NTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQA-----HSPELLLR 774 (1054)
T ss_pred ceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHH-----hhHHHHHH
Confidence 322 3344444433211 13356777
Q ss_pred hcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH
Q psy11770 417 VWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS 496 (668)
Q Consensus 417 ~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~ 496 (668)
.+.+..||||++|+||.++|+.+ |..|+.|+|||||+||+||||+|||||||| ++ + |..+||+++.+++|++
T Consensus 775 ~~~~~~VfAR~sP~qK~~iV~~l-----q~~g~~V~m~GDG~ND~~ALK~AdVGIam~-~~-d-as~AA~f~l~~~~~~~ 846 (1054)
T TIGR01657 775 LLSHTTVFARMAPDQKETLVELL-----QKLDYTVGMCGDGANDCGALKQADVGISLS-EA-E-ASVAAPFTSKLASISC 846 (1054)
T ss_pred HHhcCeEEEecCHHHHHHHHHHH-----HhCCCeEEEEeCChHHHHHHHhcCcceeec-cc-c-ceeecccccCCCcHHH
Confidence 88888999999999999999997 667999999999999999999999999999 43 3 4589999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCC
Q psy11770 497 IVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPY 576 (668)
Q Consensus 497 i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~ 576 (668)
+.++|+|||+++.++++.+.|.+.+++...+..++ ++..++|++++|++|+|++++++++++++.++|.+++|+++|
T Consensus 847 I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P- 923 (1054)
T TIGR01657 847 VPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP- 923 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC-
Confidence 99999999999999999999999999887655443 334568999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccCCCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhhcccC
Q psy11770 577 GRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDK--LLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHG 654 (668)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~ 654 (668)
.++++++.++.+++++++++.++.++.+++... |+.-......+....+...+|++| .++.+|.++.+.+++.+
T Consensus 924 --~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g- 999 (1054)
T TIGR01657 924 --PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKG- 999 (1054)
T ss_pred --CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCC-
Confidence 468999999999999999999888776655432 211001100000112234579999 67777888888888753
Q ss_pred CcccccccccCCCC
Q psy11770 655 QRNVFEGLFTTHSV 668 (668)
Q Consensus 655 ~~~~~~~~~~n~~~ 668 (668)
.++.+++++|++|
T Consensus 1000 -~pf~~~~~~N~~~ 1012 (1054)
T TIGR01657 1000 -PPFREPIYKNKPF 1012 (1054)
T ss_pred -cchhhhHHHhHHH
Confidence 3666789999864
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-87 Score=715.01 Aligned_cols=618 Identities=29% Similarity=0.427 Sum_probs=498.7
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhccCch
Q psy11770 7 AEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVPEGL 86 (668)
Q Consensus 7 ~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~iP~~L 86 (668)
.-..+..+||++.+++++...+...++..++.+|++..+ .+.+| .+.+.+.+.++++.+|+||
T Consensus 270 ~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~---------~gy~~--------l~avv~~i~iivAnvPeGL 332 (1019)
T KOG0203|consen 270 ASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALI---------LGYEW--------LRAVVFLIGIIVANVPEGL 332 (1019)
T ss_pred hccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHh---------hcchh--------HHHhhhhheeEEecCcCCc
Confidence 334567799999999999999988888877776655432 24556 6677778899999999999
Q ss_pred HHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCC------CCCCHH
Q psy11770 87 PLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKY------EDIPED 160 (668)
Q Consensus 87 p~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~------~~~~~~ 160 (668)
|..+|.+++...+||++++++||++.++|+||+.++||+|||||||+|+|+|.++|.++......... ....+.
T Consensus 333 ~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~ 412 (1019)
T KOG0203|consen 333 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSA 412 (1019)
T ss_pred cceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999988755433211 111223
Q ss_pred HHHHHHHHHhhcCCCCcccccCCCCCC--CcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEE
Q psy11770 161 IASKIVEGISVNSGYTSKIMAPENANE--LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMST 238 (668)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msv 238 (668)
....+......|+...- .+.+.+-+ .....|++.|.||++++....-+...+|+.++. +.+.||+|.+|+.-.
T Consensus 413 ~~~~l~r~~~lCn~a~~--~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~k---v~eipfNSt~Kyqls 487 (1019)
T KOG0203|consen 413 TFIALSRIATLCNRAVF--KPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPK---VAEIPFNSTNKYQLS 487 (1019)
T ss_pred hHHHHHHHHHHhCccee--cccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHH---hhcCCcccccceEEE
Confidence 34455666555554321 12222111 124579999999999998765555677776653 577899999999999
Q ss_pred EEeeC----CeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhh
Q psy11770 239 VIPKK----NGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQ 314 (668)
Q Consensus 239 vv~~~----~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~ 314 (668)
+++.+ .++.+.+|||||.++++|+.+.. +|+..+++++.++. +++..+++...|-||++|+++.++.+++....
T Consensus 488 ih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~-f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~ 565 (1019)
T KOG0203|consen 488 IHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEA-FQEAYLELGGLGERVLGFCDLELPDEKFPRGF 565 (1019)
T ss_pred EEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHH-HHHHHHHhhhcchHHHHHHHHhcchhcCCCce
Confidence 98763 36889999999999999999875 68888898887766 56888999999999999999998876433211
Q ss_pred cccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCc-----
Q psy11770 315 VHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED----- 389 (668)
Q Consensus 315 ~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~----- 389 (668)
...-+.. ..--.++.|+|++++-||+|..+++++.+||.+||+++|+|||++.||+++|++.||+..++.
T Consensus 566 ~f~~d~~-----n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~ 640 (1019)
T KOG0203|consen 566 QFDTDDV-----NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDI 640 (1019)
T ss_pred EeecCCC-----CCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhh
Confidence 1111111 122358999999999999999999999999999999999999999999999999998764332
Q ss_pred -----------------eEEeehhhHHHhhhcCchhhhHHHHhhhcCC--cEEEEecCHhhHHHHHHHHHHhhcCCCCCE
Q psy11770 390 -----------------YLILEGKEFNRRVRDNNGEVQQNLLDKVWPR--LRVLARSSPSDKYTLVKGMIDSKISAGREV 450 (668)
Q Consensus 390 -----------------~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~ 450 (668)
..+++|.++.+ ++.+.+++++.+ -.||||.||+||..||+.. |+.|.+
T Consensus 641 a~r~~~~v~~vn~~~a~a~VihG~eL~~--------~~~~qld~il~nh~eIVFARTSPqQKLiIVe~c-----Qr~Gai 707 (1019)
T KOG0203|consen 641 AKRLNIPVEQVNSRDAKAAVIHGSELPD--------MSSEQLDELLQNHQEIVFARTSPQQKLIIVEGC-----QRQGAI 707 (1019)
T ss_pred HHhcCCcccccCccccceEEEecccccc--------cCHHHHHHHHHhCCceEEEecCccceEEeEhhh-----hhcCcE
Confidence 23444444433 345556655432 2589999999999999985 788999
Q ss_pred EEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 451 VAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF 530 (668)
Q Consensus 451 v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 530 (668)
|+.+|||+||+||||.||||||||+.|++++|++||+++.||||.+|+..++|||.+|+|++|.+.|.++.|+..+.+.+
T Consensus 708 VaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL 787 (1019)
T KOG0203|consen 708 VAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 787 (1019)
T ss_pred EEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCC-CCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHh
Q psy11770 531 IGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYG-RTKALISKTMMK-NIIGQAIYQLVIIFGILFF 608 (668)
Q Consensus 531 ~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 608 (668)
++.+++.|.|+..+++|++++.+|++|+++|++|+|+.|+|+|+||. +++.++|.+.+. .++..+++|++..|+.+|.
T Consensus 788 ~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFv 867 (1019)
T KOG0203|consen 788 LFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFV 867 (1019)
T ss_pred HHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999996 788899987655 4555688888777654442
Q ss_pred ---hccc-----------------cCCCCCCCCCCCCcc-----cchhhHHHHHHHHHHHHHHHHhhcccCCcccccccc
Q psy11770 609 ---GDKL-----------------LDIPTGRGAEYGSLP-----TQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663 (668)
Q Consensus 609 ---~~~~-----------------~~~~~~~~~~~~~~~-----~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~ 663 (668)
-..+ -++.+++++.|.++. ...+|..|.++|+.|+++++.|.+.+. ++|..-+
T Consensus 868 ima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRn--SlfqqGm 945 (1019)
T KOG0203|consen 868 IMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRN--SIFQQGM 945 (1019)
T ss_pred HHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchh--HHHHhhh
Confidence 1111 134566677766543 335688999999999999999987554 7887668
Q ss_pred cCCCC
Q psy11770 664 TTHSV 668 (668)
Q Consensus 664 ~n~~~ 668 (668)
+|+.+
T Consensus 946 rN~vl 950 (1019)
T KOG0203|consen 946 RNKVL 950 (1019)
T ss_pred hhhhH
Confidence 99864
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-84 Score=769.39 Aligned_cols=582 Identities=23% Similarity=0.292 Sum_probs=447.5
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHH-------HHHHHHHHHHHHH
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA-------IYFREFVRFFIVG 74 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 74 (668)
|+.+|...++.|+|++|+++|++...++.+.+++|++++++...+. .. .....|+. .....+...+..+
T Consensus 228 k~~~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~---~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 303 (1057)
T TIGR01652 228 KLMRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWN---DA-HGKDLWYIRLDVSERNAAANGFFSFLTF 303 (1057)
T ss_pred hhhhcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhee---cc-cCCCccceecCcccccchhHHHHHHHHH
Confidence 5667888888999999999999999988877777766555432221 00 00112321 0112334567788
Q ss_pred HhhhhhhccCchHHHHHHHHHHHH------HHHhhC----CCcccCCchHHhhccccEEEcccccccccCceEEEEEEEc
Q psy11770 75 VTVLVVAVPEGLPLAVTLSLAYSV------KKMMKD----NNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVC 144 (668)
Q Consensus 75 i~ilv~~iP~~Lp~~~~~~l~~~~------~~l~~~----~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 144 (668)
+.+++.++|++||+.++++...+. .+|.++ ++.||+++++|+||+|++||+|||||||+|+|++++++++
T Consensus 304 ~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~ 383 (1057)
T TIGR01652 304 LILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIA 383 (1057)
T ss_pred HHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEEC
Confidence 899999999999999999999998 888875 4999999999999999999999999999999999999999
Q ss_pred CEEEecCCC---------CC-----------C-------------------CCHHHHHHHHHHHhhcCCCCcccccCCCC
Q psy11770 145 EVQYKNIPK---------YE-----------D-------------------IPEDIASKIVEGISVNSGYTSKIMAPENA 185 (668)
Q Consensus 145 ~~~~~~~~~---------~~-----------~-------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (668)
|..|..... .. . ...+....+..+++.||+..... ..++.
T Consensus 384 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~-~~~~~ 462 (1057)
T TIGR01652 384 GVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEF-NDDGP 462 (1057)
T ss_pred CEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccc-cCCCC
Confidence 887753210 00 0 00111234566777777643210 01111
Q ss_pred CCCcccccChhHHHHHHHHHHcCCChHHHhh-----------hCCccceeeeeccCCCCceEEEEEee-CCeEEEEEcCc
Q psy11770 186 NELPKQVGNKTECALLGFVVAIGKNYQTVRD-----------DLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGA 253 (668)
Q Consensus 186 ~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~-----------~~~~~~~~~~~~F~s~rk~msvvv~~-~~~~~~~~KGa 253 (668)
....+..+||+|.|+++++...|..+..... ....+++++++||+|+||||||++++ ++++++|+|||
T Consensus 463 ~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA 542 (1057)
T TIGR01652 463 EEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGA 542 (1057)
T ss_pred CceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCc
Confidence 1234667999999999999988865432111 11246778899999999999999998 55789999999
Q ss_pred hHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCC-CCc-------
Q psy11770 254 SEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPN-WDD------- 325 (668)
Q Consensus 254 ~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~-~~~------- 325 (668)
||+|+++|+.. +++.+ +...+++++|+++|+|||++|||.+++++++.|...+++... ..+
T Consensus 543 ~e~il~~~~~~----------~~~~~-~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~ 611 (1057)
T TIGR01652 543 DTVIFKRLSSG----------GNQVN-EETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDV 611 (1057)
T ss_pred HHHHHHHhhcc----------chhHH-HHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 99999999731 11222 235678899999999999999999998876655433321111 111
Q ss_pred -ccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeeh---------
Q psy11770 326 -ESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEG--------- 395 (668)
Q Consensus 326 -~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g--------- 395 (668)
.+++|+||+|+|+++++|++|++++++|+.|+++||++||+|||+.+||.++|++||++.++...+.+++
T Consensus 612 ~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~ 691 (1057)
T TIGR01652 612 VAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSV 691 (1057)
T ss_pred HHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHH
Confidence 2458999999999999999999999999999999999999999999999999999999877665544444
Q ss_pred ------------------------------hhHHHhhhcCchhhhHHHHhhhcC--CcEEEEecCHhhHHHHHHHHHHhh
Q psy11770 396 ------------------------------KEFNRRVRDNNGEVQQNLLDKVWP--RLRVLARSSPSDKYTLVKGMIDSK 443 (668)
Q Consensus 396 ------------------------------~~~~~~~~~~~~~~~~~~l~~~~~--~~~v~~r~~p~~K~~iv~~l~~~~ 443 (668)
+++.....+. ..+.+.++.. +..||||++|+||.++|+.+++
T Consensus 692 ~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~----~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~-- 765 (1057)
T TIGR01652 692 EAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEE----LEKEFLQLALKCKAVICCRVSPSQKADVVRLVKK-- 765 (1057)
T ss_pred HHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhH----HHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHh--
Confidence 3222211100 0112333333 3459999999999999999742
Q ss_pred cCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q psy11770 444 ISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV-MWGRNVYDSISKFLQFQLTVN 522 (668)
Q Consensus 444 ~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l-~~gR~~~~~i~~~i~~~l~~n 522 (668)
..+++|+|+|||+||++|||+|||||++.+....+|+++||+++. +|+.+.+++ .|||++|.|+++++.|.|++|
T Consensus 766 --~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn 841 (1057)
T TIGR01652 766 --STGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKN 841 (1057)
T ss_pred --cCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 238899999999999999999999998753333368999999998 699999997 899999999999999999999
Q ss_pred HHHHHHHHHHHhhcCC---CchhHHHHHHHHHHHhHHHHHHhcc--cCCCccccccCCC----CCCCCCCCHHHHHHHHH
Q psy11770 523 VVAVIVAFIGACAVQD---SPLKAVQMLWVNLIMDTLASLALAT--EMPTPDLLLRKPY----GRTKALISKTMMKNIIG 593 (668)
Q Consensus 523 ~~~~~~~~~~~~~~~~---~~l~~~~~l~~n~~~~~~~~l~l~~--~~~~~~l~~~~P~----~~~~~~~~~~~~~~~~~ 593 (668)
++.+++.+++.++..+ +++++++++|+|++++++|+++++. +++++++|.++|+ ++++++++.+.++.|++
T Consensus 842 ~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~ 921 (1057)
T TIGR01652 842 LIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWML 921 (1057)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHH
Confidence 9999999988876544 4678999999999999999999963 6778899999997 67788999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q psy11770 594 QAIYQLVIIFGILFFG 609 (668)
Q Consensus 594 ~~~~~~~~~~~~~~~~ 609 (668)
.|++|++++|++.++.
T Consensus 922 ~~~~~~~ii~~~~~~~ 937 (1057)
T TIGR01652 922 DGIYQSLVIFFFPMFA 937 (1057)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998876654
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-81 Score=737.55 Aligned_cols=584 Identities=20% Similarity=0.246 Sum_probs=442.5
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccch----hhHH---------------H
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDE----EWKA---------------I 62 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------~ 62 (668)
|+.+|..+++.|.|++|+++|++...++.+.+++|+++.++...|..-. .+. +|+. .
T Consensus 310 K~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~----~~~~~yl~~~~~~~~~~~~~~~~~~~~ 385 (1178)
T PLN03190 310 KAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRH----RDELDTIPFYRRKDFSEGGPKNYNYYG 385 (1178)
T ss_pred hHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccc----cccccccccccccccccccccccccch
Confidence 6778888888999999999999999998888888776665543332100 011 1110 0
Q ss_pred HHHHHHHHHHHHHhhhhhhccCchHHHHHHHHHHHHHHHhhCC----------CcccCCchHHhhccccEEEcccccccc
Q psy11770 63 YFREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDN----------NLVRHLDACETMGNATAICSDKTGTLT 132 (668)
Q Consensus 63 ~~~~~~~~~~~~i~ilv~~iP~~Lp~~~~~~l~~~~~~l~~~~----------ilv~~~~~~e~lg~v~~i~~DKTGTLT 132 (668)
+.......+..++.++...||.+|++.+.++.......|.++. +.||+++.+|+||+|++||+|||||||
T Consensus 386 ~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT 465 (1178)
T PLN03190 386 WGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLT 465 (1178)
T ss_pred hhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccc
Confidence 0011123344556677799999999999999977677777665 679999999999999999999999999
Q ss_pred cCceEEEEEEEcCEEEecCCC--------------CC-------C-C------------C---HHHHHHHHHHHhhcCCC
Q psy11770 133 TNRMTAVQAYVCEVQYKNIPK--------------YE-------D-I------------P---EDIASKIVEGISVNSGY 175 (668)
Q Consensus 133 ~n~m~v~~~~~~~~~~~~~~~--------------~~-------~-~------------~---~~~~~~l~~~~~~~~~~ 175 (668)
+|+|+|++|+++|..|+.... .. . . . ......++.+++.||+.
T Consensus 466 ~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv 545 (1178)
T PLN03190 466 ENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTI 545 (1178)
T ss_pred cceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCc
Confidence 999999999999887752100 00 0 0 0 01123466777778765
Q ss_pred CcccccCCCC---CCCcccccChhHHHHHHHHHHcCCChHHH---------hhhCCccceeeeeccCCCCceEEEEEee-
Q psy11770 176 TSKIMAPENA---NELPKQVGNKTECALLGFVVAIGKNYQTV---------RDDLPEEVFTRVYTFNSVRKSMSTVIPK- 242 (668)
Q Consensus 176 ~~~~~~~~~~---~~~~~~~g~p~e~al~~~~~~~g~~~~~~---------~~~~~~~~~~~~~~F~s~rk~msvvv~~- 242 (668)
........+. ....++.++|+|.||+.++.+.|..+... ......+++++++||+|+||||||+++.
T Consensus 546 ~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~ 625 (1178)
T PLN03190 546 VPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCP 625 (1178)
T ss_pred eeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcC
Confidence 3211011101 11236778999999999999998632211 1122346778999999999999999987
Q ss_pred CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCC
Q psy11770 243 KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPN 322 (668)
Q Consensus 243 ~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~ 322 (668)
++++.+|+|||||+|+++|+.... ++.+ +.+++++++|+++|+|||++|||++++++++.|...++....
T Consensus 626 ~~~~~l~~KGA~e~il~~~~~~~~---------~~~~-~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~ 695 (1178)
T PLN03190 626 DKTVKVFVKGADTSMFSVIDRSLN---------MNVI-RATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAAST 695 (1178)
T ss_pred CCcEEEEEecCcHHHHHhhccccc---------chhH-HHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhh
Confidence 567899999999999999974321 1112 235678899999999999999999988776655443322110
Q ss_pred -C--------CcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEe
Q psy11770 323 -W--------DDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL 393 (668)
Q Consensus 323 -~--------~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~ 393 (668)
. .-.+++|+||+++|+++++|++|++++++|+.|+++||++||+|||+.+||.+||++|||+.++...+.+
T Consensus 696 ~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i 775 (1178)
T PLN03190 696 ALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIII 775 (1178)
T ss_pred hhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEe
Confidence 0 1124679999999999999999999999999999999999999999999999999999998877655555
Q ss_pred ehh-----------------------------------------------hHHHhhhcCchhhhHHHHhhhcCC--cEEE
Q psy11770 394 EGK-----------------------------------------------EFNRRVRDNNGEVQQNLLDKVWPR--LRVL 424 (668)
Q Consensus 394 ~g~-----------------------------------------------~~~~~~~~~~~~~~~~~l~~~~~~--~~v~ 424 (668)
++. .+..... ....+.+.++..+ +.||
T Consensus 776 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~----~~~~~~f~~l~~~~~~VI~ 851 (1178)
T PLN03190 776 NSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLD----SELEEQLFQLASKCSVVLC 851 (1178)
T ss_pred cCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhh----hHHHHHHHHHHHhCCEEEE
Confidence 432 1111100 0011233344433 4489
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH-HH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV-MW 503 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l-~~ 503 (668)
||++|.||+++|+.+++ ..+++|+|||||+||++|||+|||||++.+....+|+.+|||.+. .|+.+.++| .|
T Consensus 852 cR~sP~QKa~IV~~vk~----~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvH 925 (1178)
T PLN03190 852 CRVAPLQKAGIVALVKN----RTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMG--QFRFLVPLLLVH 925 (1178)
T ss_pred ecCCHHHHHHHHHHHHh----cCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchh--hhHHHHHHHHHh
Confidence 99999999999998753 236789999999999999999999997653444489999999999 899999997 59
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---hhHHHHHHHHHHHhHHHHHHhc--ccCCCccccccCCC--
Q psy11770 504 GRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSP---LKAVQMLWVNLIMDTLASLALA--TEMPTPDLLLRKPY-- 576 (668)
Q Consensus 504 gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~---l~~~~~l~~n~~~~~~~~l~l~--~~~~~~~l~~~~P~-- 576 (668)
||++|.|+.+.+.|.||+|++.+++++++.++.++++ +++|.+.+||++++++|+++++ ..+.+++.+.+.|.
T Consensus 926 Gr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY 1005 (1178)
T PLN03190 926 GHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLY 1005 (1178)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhh
Confidence 9999999999999999999999999999998887776 5789999999999999999875 44455666777783
Q ss_pred --CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy11770 577 --GRTKALISKTMMKNIIGQAIYQLVIIFGILFFG 609 (668)
Q Consensus 577 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (668)
++++..++.+.|+.|++.|++|++++|++.++.
T Consensus 1006 ~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~ 1040 (1178)
T PLN03190 1006 GAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFA 1040 (1178)
T ss_pred hhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567789999999999999999999999877654
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-79 Score=704.26 Aligned_cols=541 Identities=22% Similarity=0.345 Sum_probs=423.8
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++++++++|+|+.+++++.++..+++++++++++++.. ..+.+| ...+.+++++++++
T Consensus 184 ~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~--------~~~~~~--------~~~~~~~i~vlv~a 247 (755)
T TIGR01647 184 KAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF--------GRGESF--------REGLQFALVLLVGG 247 (755)
T ss_pred HHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HcCCCH--------HHHHHHHHHHHHHh
Confidence 44556677777889999999999999888777766655443321 012334 56788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||++++++++.+++||+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.. .+++
T Consensus 248 ~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---------~~~~- 317 (755)
T TIGR01647 248 IPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG---------FDKD- 317 (755)
T ss_pred CCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC---------CCHH-
Confidence 999999999999999999999999999999999999999999999999999999999999864310 1111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+..+..++. ...++|.|.|+++++.+.+ ..+.. ++..+.+||+|.+|+|+++++
T Consensus 318 -~~l~~a~~~~~----------------~~~~~pi~~Ai~~~~~~~~----~~~~~---~~~~~~~pf~~~~k~~~~~v~ 373 (755)
T TIGR01647 318 -DVLLYAALASR----------------EEDQDAIDTAVLGSAKDLK----EARDG---YKVLEFVPFDPVDKRTEATVE 373 (755)
T ss_pred -HHHHHHHHhCC----------------CCCCChHHHHHHHHHHHhH----HHHhc---CceEEEeccCCCCCeEEEEEE
Confidence 12222222221 1135899999999876532 11222 345678999999999999987
Q ss_pred e--CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCC
Q psy11770 242 K--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEG 319 (668)
Q Consensus 242 ~--~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~ 319 (668)
. +++.++++||+||.++++|+.. ++.++ .+++.+++++++|+|++++|||+
T Consensus 374 ~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~-~~~~~~~~~~~~G~rvl~vA~~~--------------- 426 (755)
T TIGR01647 374 DPETGKRFKVTKGAPQVILDLCDNK-----------KEIEE-KVEEKVDELASRGYRALGVARTD--------------- 426 (755)
T ss_pred eCCCceEEEEEeCChHHHHHhcCCc-----------HHHHH-HHHHHHHHHHhCCCEEEEEEEEc---------------
Confidence 6 3667889999999999999731 12222 24567789999999999999973
Q ss_pred CCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHH
Q psy11770 320 DPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN 399 (668)
Q Consensus 320 ~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~ 399 (668)
.|++++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||... +++++++.
T Consensus 427 ---------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~-----~~~~~~l~ 492 (755)
T TIGR01647 427 ---------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN-----IYTADVLL 492 (755)
T ss_pred ---------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-----CcCHHHhc
Confidence 0368899999999999999999999999999999999999999999999999999532 23444432
Q ss_pred HhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccH
Q psy11770 400 RRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD 479 (668)
Q Consensus 400 ~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~ 479 (668)
.. ++....+++.+++...+..+|+|++|+||.++|+.+ |..|++|+|+|||.||+|||++|||||||| +|++
T Consensus 493 ~~--~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~l-----q~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtd 564 (755)
T TIGR01647 493 KG--DNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEIL-----QKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATD 564 (755)
T ss_pred CC--cchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHH-----HhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcH
Confidence 11 111234556677788888999999999999999997 567999999999999999999999999999 8999
Q ss_pred HHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHH
Q psy11770 480 VAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASL 559 (668)
Q Consensus 480 ~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l 559 (668)
.||++||+++.+++|..+.+++++||++|+|+++++.|.++.|+..+++.+++.++.. .|++|+|++|+|++.|. |++
T Consensus 565 vAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~ 642 (755)
T TIGR01647 565 AARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIM 642 (755)
T ss_pred HHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHh
Confidence 9999999999999999999999999999999999999999999998877766554333 45999999999999996 699
Q ss_pred HhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccCCCCCCCCCCCCcccchhhHHHHHH
Q psy11770 560 ALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDK-LLDIPTGRGAEYGSLPTQHFTIIFNTF 638 (668)
Q Consensus 560 ~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~f~~~ 638 (668)
++++|++++. ++| ++..+ ...+..++..|++.++..|.++++... .+..... ..+......+|++|.++
T Consensus 643 ~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~t~~f~~~ 712 (755)
T TIGR01647 643 TIAYDNVKPS---KLP---QRWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKF---GLQLLHGNLQSLIYLQV 712 (755)
T ss_pred hccCCCCCCC---CCC---Cccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcc---cccccHhhhHHHHHHHH
Confidence 9999998742 333 33333 366666777888887766665554431 0000000 00111235789999999
Q ss_pred HHHHHHHHHHhhccc
Q psy11770 639 VLMTLFNEINARKIH 653 (668)
Q Consensus 639 v~~~~~~~~~~r~~~ 653 (668)
++.|+++.+++|+.+
T Consensus 713 ~~~~~~~~~~~r~~~ 727 (755)
T TIGR01647 713 SISGQATIFVTRTHG 727 (755)
T ss_pred HHHHHHHHheeccCC
Confidence 999999999999864
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0206|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-76 Score=669.72 Aligned_cols=588 Identities=21% Similarity=0.269 Sum_probs=454.5
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHH---HHHHHHHHHHHHHhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAI---YFREFVRFFIVGVTVL 78 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~il 78 (668)
|.-+|...++.|+|++++.+|+....++.+.+.++++..+...++..... ......|+.. ........+..++.++
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~t~~il~ 335 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDG-RHNGEWWYLSPSEAAYAGFVHFLTFIILY 335 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecc-cccCchhhhcCchHHHHHHHHHHHHHhhh
Confidence 67788899999999999999999888877766666555444333221000 0001122211 1223355667778889
Q ss_pred hhhccCchHHHHHHHHHHHHH------HHhh----CCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEE
Q psy11770 79 VVAVPEGLPLAVTLSLAYSVK------KMMK----DNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQY 148 (668)
Q Consensus 79 v~~iP~~Lp~~~~~~l~~~~~------~l~~----~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~ 148 (668)
...+|.+|...+.+.-..... .|.. ..+.+|+.+..|+||+|++|++|||||||+|.|++++|.++|..|
T Consensus 336 ~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~y 415 (1151)
T KOG0206|consen 336 QYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSY 415 (1151)
T ss_pred hceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCccc
Confidence 999999998877776655442 3332 246799999999999999999999999999999999999999888
Q ss_pred ecCCCC--------C--------------------------CCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccC
Q psy11770 149 KNIPKY--------E--------------------------DIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGN 194 (668)
Q Consensus 149 ~~~~~~--------~--------------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 194 (668)
...... . ....+..+.+..++++||+...... ++.....+++.+
T Consensus 416 g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~--~~~~~~~Y~A~S 493 (1151)
T KOG0206|consen 416 GRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKD--EDSGKLSYEAES 493 (1151)
T ss_pred ccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccC--CCccceeeecCC
Confidence 643110 0 0112234567778888887542211 122256789999
Q ss_pred hhHHHHHHHHHHcCCChHHHhh---------hCCccceeeeeccCCCCceEEEEEee-CCeEEEEEcCchHHHHhhcccc
Q psy11770 195 KTECALLGFVVAIGKNYQTVRD---------DLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYI 264 (668)
Q Consensus 195 p~e~al~~~~~~~g~~~~~~~~---------~~~~~~~~~~~~F~s~rk~msvvv~~-~~~~~~~~KGa~e~il~~c~~~ 264 (668)
|+|.|++..|++.|..+..... ....++++...||+|.|||||||++. ++++.+|||||+.+|.++++.
T Consensus 494 PDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~- 572 (1151)
T KOG0206|consen 494 PDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK- 572 (1151)
T ss_pred CcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh-
Confidence 9999999999999876532211 11246788999999999999999999 669999999999999999974
Q ss_pred cccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCC-CCc--------ccccccCeEE
Q psy11770 265 YGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPN-WDD--------ESNIVSHLTC 335 (668)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~-~~~--------~~~~e~~l~~ 335 (668)
++ +...+...+++++|+.+|+||||+|||++++++++.|.+.+.+... ..+ .+.+|+||++
T Consensus 573 ---~~-------~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~L 642 (1151)
T KOG0206|consen 573 ---NG-------EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLIL 642 (1151)
T ss_pred ---cc-------hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchh
Confidence 11 1122335678999999999999999999999999998877643332 222 2568999999
Q ss_pred EEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhh------HHH---------
Q psy11770 336 LCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE------FNR--------- 400 (668)
Q Consensus 336 lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~------~~~--------- 400 (668)
+|.+++||+++++++++|+.|++||||+||+|||+.+||.+|+..|+++.++...+.++... ...
T Consensus 643 LGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~ 722 (1151)
T KOG0206|consen 643 LGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLL 722 (1151)
T ss_pred hcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998877776665422 000
Q ss_pred -hh----h----c--C-c------hh-----hhH---HHH--hhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEE
Q psy11770 401 -RV----R----D--N-N------GE-----VQQ---NLL--DKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVA 452 (668)
Q Consensus 401 -~~----~----~--~-~------~~-----~~~---~~l--~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~ 452 (668)
.. . + . + +. ..+ ..+ -....+..+|||++|.||+.+|+..+ +..+..++
T Consensus 723 ~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk----~~~~~~TL 798 (1151)
T KOG0206|consen 723 RKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVK----KGLKAVTL 798 (1151)
T ss_pred HhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHH----hcCCceEE
Confidence 00 0 0 0 0 00 000 011 11224567999999999999999873 45788999
Q ss_pred EEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 453 VTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV-MWGRNVYDSISKFLQFQLTVNVVAVIVAFI 531 (668)
Q Consensus 453 ~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 531 (668)
+||||+||++|+++|||||++++.+..+|..+||+.+. .|+.+.+++ .|||++|.|+.+++.|+||+|+...+..|+
T Consensus 799 AIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fw 876 (1151)
T KOG0206|consen 799 AIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFW 876 (1151)
T ss_pred EeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888899999999999 899999986 799999999999999999999999999999
Q ss_pred HHhhcCCCc---hhHHHHHHHHHHHhHHHHHHhc--ccCCCccccccCCC----CCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy11770 532 GACAVQDSP---LKAVQMLWVNLIMDTLASLALA--TEMPTPDLLLRKPY----GRTKALISKTMMKNIIGQAIYQLVII 602 (668)
Q Consensus 532 ~~~~~~~~~---l~~~~~l~~n~~~~~~~~l~l~--~~~~~~~l~~~~P~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (668)
+.++.+++. +.+|++.++|++++++|++.+| ..+.+.+.+.+.|. +++...++++.|+.|+..+++|++++
T Consensus 877 y~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~ 956 (1151)
T KOG0206|consen 877 YQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVI 956 (1151)
T ss_pred hhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheee
Confidence 998876653 6889999999999999999887 44566677777773 66778999999999999999999999
Q ss_pred HHHHHhh
Q psy11770 603 FGILFFG 609 (668)
Q Consensus 603 ~~~~~~~ 609 (668)
|++.+..
T Consensus 957 Ff~~~~~ 963 (1151)
T KOG0206|consen 957 FFLPYLV 963 (1151)
T ss_pred eeeeHhh
Confidence 9877654
|
|
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-70 Score=571.80 Aligned_cols=556 Identities=21% Similarity=0.265 Sum_probs=433.9
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
+-|+|...++.|-.-|+.++|.+.+.++.+++++++++... ..-+..|+ ..+++.+.++...
T Consensus 303 RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~----------~g~~~~wy--------i~~~RfllLFS~I 364 (1051)
T KOG0210|consen 303 RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM----------KGFGSDWY--------IYIIRFLLLFSSI 364 (1051)
T ss_pred HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh----------hcCCCchH--------HHHHHHHHHHhhh
Confidence 34789999999999999999999999887777666553321 11245674 4566777788888
Q ss_pred ccCchHHHHHHHHHHHHHHHhhC----CCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecC------
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKD----NNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNI------ 151 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~----~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~------ 151 (668)
||.+|-..+.++-..-...+.++ |.+||+....|+||+++++.+|||||||+|+|.+++++.+-..|..+
T Consensus 365 IPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~ 444 (1051)
T KOG0210|consen 365 IPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVS 444 (1051)
T ss_pred ceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHH
Confidence 99999999999888777777665 56799999999999999999999999999999999999987766431
Q ss_pred --------CCC----------CCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHH
Q psy11770 152 --------PKY----------EDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQT 213 (668)
Q Consensus 152 --------~~~----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~ 213 (668)
+.. ..........+..+++.||+.+. ..++++...|++.+|+|+|++++.+..|.....
T Consensus 445 ~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTP---v~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~ 521 (1051)
T KOG0210|consen 445 QHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTP---VFEDDGEVSYQAASPDEVAIVKWTETVGLKLAK 521 (1051)
T ss_pred HHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCc---ccCCCceEEeecCCCCeEEEEEeeeecceEEee
Confidence 000 01112234567778888988753 233445778999999999999998887754322
Q ss_pred H-----hhhC-----CccceeeeeccCCCCceEEEEEee--CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHH
Q psy11770 214 V-----RDDL-----PEEVFTRVYTFNSVRKSMSTVIPK--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGR 281 (668)
Q Consensus 214 ~-----~~~~-----~~~~~~~~~~F~s~rk~msvvv~~--~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~ 281 (668)
. .-+. ..++++..|||+|+.|||.++|++ .+++..|.|||+-++....+. + .
T Consensus 522 Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~-----------N-----d 585 (1051)
T KOG0210|consen 522 RDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY-----------N-----D 585 (1051)
T ss_pred cccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc-----------c-----h
Confidence 1 1112 257899999999999999999998 489999999999988766542 1 2
Q ss_pred HHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC-CCCcc---------cccccCeEEEEEEeecCCCCCchHH
Q psy11770 282 LVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP-NWDDE---------SNIVSHLTCLCVIGIEDPVRPEVPE 351 (668)
Q Consensus 282 ~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~-~~~~~---------~~~e~~l~~lG~~~~~d~l~~~~~~ 351 (668)
++++...+||++|+|||++|.|.+++++++.++..|.... ...++ ..+|+||.++|++|+||+++++++.
T Consensus 586 WleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~ 665 (1051)
T KOG0210|consen 586 WLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKP 665 (1051)
T ss_pred hhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHh
Confidence 4567788999999999999999999998877655543322 12221 2578999999999999999999999
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEee--------------------------hhhHHHhhhcC
Q psy11770 352 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILE--------------------------GKEFNRRVRDN 405 (668)
Q Consensus 352 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~--------------------------g~~~~~~~~~~ 405 (668)
+++.||+||||+||+|||+.+||..+|+..++...+..+-++. |+.++-.+
T Consensus 666 tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl--- 742 (1051)
T KOG0210|consen 666 TLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCL--- 742 (1051)
T ss_pred HHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHH---
Confidence 9999999999999999999999999999999987765543332 22222111
Q ss_pred chhhhHHHHhhhc--CCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHH
Q psy11770 406 NGEVQQNLLDKVW--PRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKE 483 (668)
Q Consensus 406 ~~~~~~~~l~~~~--~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~ 483 (668)
+.-++++.++. ....++|||+|.||+++++.+++ ..++.|++||||.||+.|+++||+||++-+++..+|.-
T Consensus 743 --~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~----~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL 816 (1051)
T KOG0210|consen 743 --KYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQK----KTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL 816 (1051)
T ss_pred --HHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHH----hhCceEEEEcCCCccchheeecccceeeecccccccch
Confidence 01122222222 24578999999999999999864 35789999999999999999999999976588888999
Q ss_pred hcchhcccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCch---hHHHHHHHHHHHhHHHHH
Q psy11770 484 ASDIILTDDNFSSIVKAV-MWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPL---KAVQMLWVNLIMDTLASL 559 (668)
Q Consensus 484 ~ad~vl~~~~~~~i~~~l-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l---~~~~~l~~n~~~~~~~~l 559 (668)
|||+.+. .|+++.+++ -|||..|+|..+.-+|.+-..+....++..+...+.+.|. -.+.|..+..+.+.+|.+
T Consensus 817 AADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVF 894 (1051)
T KOG0210|consen 817 AADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVF 894 (1051)
T ss_pred hccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhh
Confidence 9999999 899999997 5999999999999999999999888888877766555554 345677899999999999
Q ss_pred HhcccC-CCccccccCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy11770 560 ALATEM-PTPDLLLRKPY----GRTKALISKTMMKNIIGQAIYQLVIIFGI 605 (668)
Q Consensus 560 ~l~~~~-~~~~l~~~~P~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (668)
++..+. .++.+...+|. -.+.+.++.+.|..|+..++||+.++.+.
T Consensus 895 Slv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g 945 (1051)
T KOG0210|consen 895 SLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYG 945 (1051)
T ss_pred eeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHH
Confidence 988554 44444445552 34567899999999999999999887664
|
|
| >KOG0208|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-68 Score=581.18 Aligned_cols=552 Identities=21% Similarity=0.289 Sum_probs=407.4
Q ss_pred HHHHHHHHhhhhhhccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEE
Q psy11770 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQ 147 (668)
Q Consensus 68 ~~~~~~~i~ilv~~iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 147 (668)
...+++++.++.+.+|+|||++++++..++.+||.|+||+|.+|+.+...|++|++||||||||||+.+.+..+......
T Consensus 416 ~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~ 495 (1140)
T KOG0208|consen 416 KTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERN 495 (1140)
T ss_pred HHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999988874322
Q ss_pred EecCCC-------C--------CCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCC---
Q psy11770 148 YKNIPK-------Y--------EDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGK--- 209 (668)
Q Consensus 148 ~~~~~~-------~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~--- 209 (668)
....+. . .+....-...+..+++.||+... .. ....|||.|.-+.+.....-.
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~--v~-------g~l~GDPLdlkmfe~t~w~~ee~~ 566 (1140)
T KOG0208|consen 496 VDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTL--VD-------GTLVGDPLDLKMFESTGWVYEEAD 566 (1140)
T ss_pred ccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEE--eC-------CeeccCceeeeeeeccceEEEecc
Confidence 111100 0 00000113457777888886531 11 123455555544432211100
Q ss_pred -ChHH-----------Hh------hh---C-C-ccceeeeeccCCCCceEEEEEee--CCeEEEEEcCchHHHHhhcccc
Q psy11770 210 -NYQT-----------VR------DD---L-P-EEVFTRVYTFNSVRKSMSTVIPK--KNGYRVYTKGASEIILKKCSYI 264 (668)
Q Consensus 210 -~~~~-----------~~------~~---~-~-~~~~~~~~~F~s~rk~msvvv~~--~~~~~~~~KGa~e~il~~c~~~ 264 (668)
.... ++ +. . + ...+++.|||+|..+|||||++. +++..+|+|||||.|.+.|+..
T Consensus 567 ~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~ 646 (1140)
T KOG0208|consen 567 IEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE 646 (1140)
T ss_pred ccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc
Confidence 0000 00 00 0 1 35688999999999999999998 5789999999999999999732
Q ss_pred cccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCC
Q psy11770 265 YGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDP 344 (668)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 344 (668)
..++.+++.+++|+.+|+||+|+|+|.++... |. ......++.+|+||+|+|++.||++
T Consensus 647 -------------tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~---~~-----~~~~~~Rd~vEs~l~FlGLiVmeNk 705 (1140)
T KOG0208|consen 647 -------------TVPADYQEVLKEYTHQGFRVIALASKELETST---LQ-----KAQKLSRDTVESNLEFLGLIVMENK 705 (1140)
T ss_pred -------------cCCccHHHHHHHHHhCCeEEEEEecCccCcch---HH-----HHhhccHhhhhccceeeEEEEeecc
Confidence 11223678899999999999999999987651 10 0112357789999999999999999
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH-------------------------H
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF-------------------------N 399 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~-------------------------~ 399 (668)
++++++.+|++|++|+||++|+||||..||..+|++||++.+....+..+-.+- .
T Consensus 706 LK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~ 785 (1140)
T KOG0208|consen 706 LKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPD 785 (1140)
T ss_pred cccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccC
Confidence 999999999999999999999999999999999999999988665544332200 0
Q ss_pred H-hhhcC---c-------------------hhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcC
Q psy11770 400 R-RVRDN---N-------------------GEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGD 456 (668)
Q Consensus 400 ~-~~~~~---~-------------------~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGD 456 (668)
. ..... + -+...+.++++..+..|||||+|.||.++|+.+ |.-++.|+||||
T Consensus 786 ~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~l-----Qkl~y~VgfCGD 860 (1140)
T KOG0208|consen 786 PDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEAL-----QKLGYKVGFCGD 860 (1140)
T ss_pred ccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHH-----HhcCcEEEecCC
Confidence 0 00000 0 011345677788888999999999999999997 667999999999
Q ss_pred CccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy11770 457 GTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAV 536 (668)
Q Consensus 457 g~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~ 536 (668)
|+||+.|||+||+||+.+ ..+|.-||.++..-.+.+++.++|+|||..+-.--.++.|...+.+......+ .++.
T Consensus 861 GANDCgALKaAdvGISLS---eaEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~ 935 (1140)
T KOG0208|consen 861 GANDCGALKAADVGISLS---EAEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV--FLYL 935 (1140)
T ss_pred CcchhhhhhhcccCcchh---hhhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeee
Confidence 999999999999999987 45677889999988899999999999999999999999998888777554433 2455
Q ss_pred CCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc--cccC
Q psy11770 537 QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGD--KLLD 614 (668)
Q Consensus 537 ~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 614 (668)
....+++.|.++++++...+.+++++..+|...+-..+| +..+++++.+...++|.++..++-+...+... .|+.
T Consensus 936 ~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~ 1012 (1140)
T KOG0208|consen 936 INSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYE 1012 (1140)
T ss_pred ecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHHHhhheeecccccee
Confidence 677899999999999999999999999999999988877 56699999888888888777766665554432 2221
Q ss_pred CCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhhcccCCcccccccccCCC
Q psy11770 615 IPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTTHS 667 (668)
Q Consensus 615 ~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~~n~~ 667 (668)
-+.. +..+.......|..|..=.+.-+++.+..- ...++.+++++|+.
T Consensus 1013 pp~~--~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S---~g~pfr~pl~~n~~ 1060 (1140)
T KOG0208|consen 1013 PPNP--QVDDNTQSSDNTSLFFVSSFQYIFIALVLS---KGSPFRRPLWKNVL 1060 (1140)
T ss_pred cCCC--CcCcccccceeeEeeehhHHHHHHhheeec---cCCcccCchhcCce
Confidence 1111 101112223345555444444444444332 22355567777764
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-62 Score=542.13 Aligned_cols=387 Identities=22% Similarity=0.285 Sum_probs=304.6
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||.+..++++.++||+|..+..+...+..+. +++++++.. +..+ . +| ...+...+++++++
T Consensus 199 ki~~lve~a~~~ktp~e~~l~~l~~~l~ii~-----l~~~~~~~~--~~~~--~--~~--------~~~~~~~val~V~~ 259 (673)
T PRK14010 199 KMIGLVEGATRKKTPNEIALFTLLMTLTIIF-----LVVILTMYP--LAKF--L--NF--------NLSIAMLIALAVCL 259 (673)
T ss_pred HHHHHHhhccccCCHHHHHHHHHHHHHhHHH-----HHHHHHHHH--HHhh--c--cH--------HHHHHHHHHHHHHh
Confidence 5667778888889999988777654443211 111111110 0000 0 11 23456677888888
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||..++++++.|++||+|+|+++|+++++|+||++|+||||||||||+|++.+.++...+. ..
T Consensus 260 IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~----------~~--- 326 (673)
T PRK14010 260 IPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS----------SS--- 326 (673)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC----------cc---
Confidence 99999999999999999999999999999999999999999999999999997777666442110 01
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.+.+......|+.. ..+|.+.|+++++.+.+.+....+ .+..||++++|+|++.++
T Consensus 327 ~~~ll~~a~~~~~~----------------s~~P~~~AIv~~a~~~~~~~~~~~--------~~~~pF~~~~k~~gv~~~ 382 (673)
T PRK14010 327 FERLVKAAYESSIA----------------DDTPEGRSIVKLAYKQHIDLPQEV--------GEYIPFTAETRMSGVKFT 382 (673)
T ss_pred HHHHHHHHHHhcCC----------------CCChHHHHHHHHHHHcCCCchhhh--------cceeccccccceeEEEEC
Confidence 11223322223211 127999999999987665432111 234799999999998753
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
++ .+.||||+.++++|+. +|...+ .+ .++..++++++|+|+++++.
T Consensus 383 --g~--~i~kGa~~~il~~~~~----~g~~~~--~~-----~~~~~~~~a~~G~~~l~v~~------------------- 428 (673)
T PRK14010 383 --TR--EVYKGAPNSMVKRVKE----AGGHIP--VD-----LDALVKGVSKKGGTPLVVLE------------------- 428 (673)
T ss_pred --CE--EEEECCHHHHHHHhhh----cCCCCc--hH-----HHHHHHHHHhCCCeEEEEEE-------------------
Confidence 33 4559999999999974 222111 11 23456788999999998762
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|++++|+++++|++||+++++|++||++||+++|+|||++.||.++|+++|+.
T Consensus 429 ----------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~----------------- 481 (673)
T PRK14010 429 ----------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD----------------- 481 (673)
T ss_pred ----------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-----------------
Confidence 45899999999999999999999999999999999999999999999999993
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.+++|++|+||.++|+.+ |..|+.|+|+|||.||+|+|++|||||||| +|++.|
T Consensus 482 --------------------~v~A~~~PedK~~iV~~l-----Q~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 535 (673)
T PRK14010 482 --------------------RFVAECKPEDKINVIREE-----QAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSA 535 (673)
T ss_pred --------------------eEEcCCCHHHHHHHHHHH-----HhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHH
Confidence 479999999999999996 667999999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFI 531 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 531 (668)
|++||+++.||+|..|.+++++||++|.|+++++.|+++.|+...+..+.
T Consensus 536 keAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~ 585 (673)
T PRK14010 536 KEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILP 585 (673)
T ss_pred HHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999977765544
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-60 Score=528.69 Aligned_cols=392 Identities=24% Similarity=0.325 Sum_probs=306.2
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||.+..++++.++||+|..++++...+..+.+++++.++. +.+ + .+.+| .+..++++++++
T Consensus 199 ki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~--~~~-----~--~g~~~----------~l~~~iallV~a 259 (679)
T PRK01122 199 RMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP--FAA-----Y--SGGAL----------SITVLVALLVCL 259 (679)
T ss_pred HHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH--HHH-----H--hCchH----------HHHHHHHHHHHc
Confidence 4566777888889999999998876665433322211111 111 1 12222 567788999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|+..+++....|+.||+|+|+++|+++++|+||++|+||||||||||+|+|.+.+++..+. .++
T Consensus 260 iP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~----------~~~-- 327 (679)
T PRK01122 260 IPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG----------VTE-- 327 (679)
T ss_pred ccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC----------CCH--
Confidence 99999999999999999999999999999999999999999999999999999999998864221 111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHH-cCCChHHHhhhCCccceeeeeccCCCCceEEEEE
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVA-IGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVI 240 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~-~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv 240 (668)
+.+......++... .+|...|+++++.+ .+...... . +...+.+||++.+|+|++.+
T Consensus 328 -~~ll~~a~~~s~~s----------------~hP~~~AIv~~a~~~~~~~~~~~--~---~~~~~~~pF~s~~~~~gv~~ 385 (679)
T PRK01122 328 -EELADAAQLSSLAD----------------ETPEGRSIVVLAKQRFNLRERDL--Q---SLHATFVPFSAQTRMSGVDL 385 (679)
T ss_pred -HHHHHHHHHhcCCC----------------CCchHHHHHHHHHhhcCCCchhh--c---cccceeEeecCcCceEEEEE
Confidence 22333333332211 14677899998876 33321111 1 12356789999998888765
Q ss_pred eeCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 241 PKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 241 ~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
. + ..+.||++|.+++.|.. +|... + +..++..++++++|+|++++|+
T Consensus 386 ~--g--~~~~kGa~e~il~~~~~----~g~~~--~-----~~~~~~~~~~a~~G~~~l~va~------------------ 432 (679)
T PRK01122 386 D--G--REIRKGAVDAIRRYVES----NGGHF--P-----AELDAAVDEVARKGGTPLVVAE------------------ 432 (679)
T ss_pred C--C--EEEEECCHHHHHHHHHh----cCCcC--h-----HHHHHHHHHHHhCCCcEEEEEE------------------
Confidence 3 3 47899999999999963 22211 1 1134567889999999999994
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
|++++|+++++|++||++++++++||++||+++|+|||++.||.++|+++|+.
T Consensus 433 -----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId---------------- 485 (679)
T PRK01122 433 -----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD---------------- 485 (679)
T ss_pred -----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc----------------
Confidence 45899999999999999999999999999999999999999999999999993
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
.+++|++|+||.++|+.+ |..|+.|+|+|||.||+|||++|||||||| +|++.
T Consensus 486 ---------------------~v~A~~~PedK~~iV~~l-----Q~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdv 538 (679)
T PRK01122 486 ---------------------DFLAEATPEDKLALIRQE-----QAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQA 538 (679)
T ss_pred ---------------------EEEccCCHHHHHHHHHHH-----HHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHH
Confidence 479999999999999996 567899999999999999999999999999 99999
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNV---VAVIVAFIGA 533 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~---~~~~~~~~~~ 533 (668)
||++||+++.|++|..+.+++++||+..-.-.....|++..-+ ..++++++..
T Consensus 539 AkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~ 594 (679)
T PRK01122 539 AKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAA 594 (679)
T ss_pred HHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999766666778876433 2344444443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-57 Score=500.02 Aligned_cols=384 Identities=23% Similarity=0.315 Sum_probs=302.8
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||.+..++++.++||+|..++.+...+..+.++++ +++ +. +..+ .+..| .+..++++++++
T Consensus 200 ri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~---~~~---~~-~~~~--~~~~~----------~~~~lvallV~a 260 (675)
T TIGR01497 200 RMIALVEGAQRRKTPNEIALTILLIALTLVFLLVT---ATL---WP-FAAY--GGNAI----------SVTVLVALLVCL 260 (675)
T ss_pred HHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHH---HHH---HH-HHHh--cChhH----------HHHHHHHHHHHh
Confidence 45667778888899999999888765543222211 111 11 1111 11111 456678899999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|+...+.....|++||+|+|+++|+.+++|++|++|+||||||||||+|+|++.+++..+. .+.
T Consensus 261 iP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~----------~~~-- 328 (675)
T TIGR01497 261 IPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG----------VDE-- 328 (675)
T ss_pred CchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC----------CcH--
Confidence 99998888887777899999999999999999999999999999999999999999998874221 111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+......++.. ..+|.+.|+++++.+.|.+....+ ....+..||++.+|+|++.+.
T Consensus 329 -~~ll~~aa~~~~~----------------s~hP~a~Aiv~~a~~~~~~~~~~~-----~~~~~~~pf~~~~~~sg~~~~ 386 (675)
T TIGR01497 329 -KTLADAAQLASLA----------------DDTPEGKSIVILAKQLGIREDDVQ-----SLHATFVEFTAQTRMSGINLD 386 (675)
T ss_pred -HHHHHHHHHhcCC----------------CCCcHHHHHHHHHHHcCCCccccc-----cccceEEEEcCCCcEEEEEEe
Confidence 2233333333221 125888999999987665432211 123467899999887776543
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
++ ..++||+||.+++.|.. +|... ++ .+++.+++++++|+|++++|+.
T Consensus 387 -~g--~~~~kGa~e~i~~~~~~----~g~~~--~~-----~~~~~~~~~a~~G~r~l~va~~------------------ 434 (675)
T TIGR01497 387 -NG--RMIRKGAVDAIKRHVEA----NGGHI--PT-----DLDQAVDQVARQGGTPLVVCED------------------ 434 (675)
T ss_pred -CC--eEEEECCHHHHHHHHHh----cCCCC--cH-----HHHHHHHHHHhCCCeEEEEEEC------------------
Confidence 33 46899999999998852 22211 11 1346678899999999999952
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
.+++|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++|+.
T Consensus 435 -----------~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~----------------- 486 (675)
T TIGR01497 435 -----------NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD----------------- 486 (675)
T ss_pred -----------CEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----------------
Confidence 3899999999999999999999999999999999999999999999999993
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.+++|++|++|.++|+.+ |..++.|+|+|||.||+|||++||+||||+ +|++.+
T Consensus 487 --------------------~v~a~~~PedK~~~v~~l-----q~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~a 540 (675)
T TIGR01497 487 --------------------DFIAEATPEDKIALIRQE-----QAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 540 (675)
T ss_pred --------------------EEEcCCCHHHHHHHHHHH-----HHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHH
Confidence 478999999999999997 456889999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVV 524 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~ 524 (668)
+++||+++.|++|..+.+++++||+++-+......|++...+.
T Consensus 541 keaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 541 KEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 9999999999999999999999999999999999999877664
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-54 Score=475.42 Aligned_cols=358 Identities=38% Similarity=0.556 Sum_probs=300.7
Q ss_pred cccccccCCCCCCchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 3 PVEVAEKHDEKKSVLQAKLTKLA-IQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 3 ~v~~~~~~~~~~s~lq~~l~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
+....++.+..++|+|+..++++ .++..+.+++++++++.+...+ ....+| ...+.+++++++++
T Consensus 126 i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~------~~~~~~--------~~~~~~~~~vl~~~ 191 (499)
T TIGR01494 126 IAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGL------WDPNSI--------FKIFLRALILLVIA 191 (499)
T ss_pred HHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccccH--------HHHHHHHHHHHHHh
Confidence 33444555666899999999999 5666666655555444332110 000023 56788999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||+++++++..+..+|+++|+++|+++++|+||+++++|||||||||+|+|+|.++++.+.
T Consensus 192 ~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------- 256 (499)
T TIGR01494 192 IPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------- 256 (499)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999999875321
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.+..++|.|.|+++++.+.+ .+..||++.+|+|+++++
T Consensus 257 ---------------------------~~~s~hp~~~ai~~~~~~~~---------------~~~~~f~~~~~~~~~~~~ 294 (499)
T TIGR01494 257 ---------------------------EYLSGHPDERALVKSAKWKI---------------LNVFEFSSVRKRMSVIVR 294 (499)
T ss_pred ---------------------------CcCCCChHHHHHHHHhhhcC---------------cceeccCCCCceEEEEEe
Confidence 01235799999999876411 245799999999999998
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
.+++ .|+||+++.+.++|.. +.+..++++++|+|++++|++.
T Consensus 295 ~~~~--~~~~G~~~~i~~~~~~-------------------~~~~~~~~~~~g~~~~~~a~~~----------------- 336 (499)
T TIGR01494 295 GPDG--TYVKGAPEFVLSRVKD-------------------LEEKVKELAQSGLRVLAVASKE----------------- 336 (499)
T ss_pred cCCc--EEEeCCHHHHHHhhHH-------------------HHHHHHHHHhCCCEEEEEEECC-----------------
Confidence 6333 3789999999998852 1223446788999999999743
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
+++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 337 ------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------------------ 386 (499)
T TIGR01494 337 ------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------------------ 386 (499)
T ss_pred ------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc------------------
Confidence 79999999999999999999999999999999999999999999999986
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
+++++|++|.++|+.+ +..|+.|+|+|||.||+||+++|||||+|+ +
T Consensus 387 ----------------------~~~~~p~~K~~~v~~l-----~~~g~~v~~vGDg~nD~~al~~Advgia~~------a 433 (499)
T TIGR01494 387 ----------------------FARVTPEEKAALVEAL-----QKKGRVVAMTGDGVNDAPALKKADVGIAMG------A 433 (499)
T ss_pred ----------------------eeccCHHHHHHHHHHH-----HHCCCEEEEECCChhhHHHHHhCCCccccc------h
Confidence 4779999999999987 456789999999999999999999999997 6
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
+++||+++.++++..+..++.+||+++.++++++.|.+++|+..+++++++
T Consensus 434 ~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 434 KAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred HHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999988777653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-54 Score=478.12 Aligned_cols=380 Identities=26% Similarity=0.348 Sum_probs=308.0
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||++..++++.+|+|.|+..||++.++.+.++++++++|++|.+. .+.+| ...+..++++++++
T Consensus 303 ~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~--------~~~~~--------~~a~~~a~avLVIa 366 (713)
T COG2217 303 RIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLF--------GGGDW--------ETALYRALAVLVIA 366 (713)
T ss_pred HHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHh--------cCCcH--------HHHHHHHHhheeee
Confidence 578889999999999999999999999999898888877754321 12344 45788999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|.+++|+++..+..+.+++|+++|+..++|.++++|+++||||||||+|++.|.++...+. +++.
T Consensus 367 CPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-----------~e~~ 435 (713)
T COG2217 367 CPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-----------DEDE 435 (713)
T ss_pred CccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-----------CHHH
Confidence 99999999999999999999999999999999999999999999999999999999999875331 1221
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.-.+..++. ..+.+|.-.|+++++...|..... ..+.+| .+.....+
T Consensus 436 ~L~laAalE-------------------~~S~HPiA~AIv~~a~~~~~~~~~---------~~~~i~----G~Gv~~~v- 482 (713)
T COG2217 436 LLALAAALE-------------------QHSEHPLAKAIVKAAAERGLPDVE---------DFEEIP----GRGVEAEV- 482 (713)
T ss_pred HHHHHHHHH-------------------hcCCChHHHHHHHHHHhcCCCCcc---------ceeeec----cCcEEEEE-
Confidence 122222222 122468999999988765521100 011111 11111111
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
+| ..+.-|++..+.+.-.. .+. ..+..+.+.++|..++.++.
T Consensus 483 -~g--~~v~vG~~~~~~~~~~~----------~~~------~~~~~~~~~~~G~t~v~va~------------------- 524 (713)
T COG2217 483 -DG--ERVLVGNARLLGEEGID----------LPL------LSERIEALESEGKTVVFVAV------------------- 524 (713)
T ss_pred -CC--EEEEEcCHHHHhhcCCC----------ccc------hhhhHHHHHhcCCeEEEEEE-------------------
Confidence 33 23445877766432110 110 12445778889988888874
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|..++|+++++|++|++++++|++||+.|++++|+|||+..+|.++|+++||.
T Consensus 525 ----------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId----------------- 577 (713)
T COG2217 525 ----------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID----------------- 577 (713)
T ss_pred ----------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH-----------------
Confidence 34899999999999999999999999999999999999999999999999993
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.+++.+.|++|.++|+.+ |..|+.|+|+|||.||+|+|.+|||||||| .|+|.+
T Consensus 578 --------------------~v~AellPedK~~~V~~l-----~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA 631 (713)
T COG2217 578 --------------------EVRAELLPEDKAEIVREL-----QAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVA 631 (713)
T ss_pred --------------------hheccCCcHHHHHHHHHH-----HhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHH
Confidence 478999999999999997 567899999999999999999999999999 799999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
+++||+++.+++...+.+++..+|+++++|++++.|.|.+|.+.+.+..++
T Consensus 632 ~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 632 IEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999888765
|
|
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-54 Score=460.65 Aligned_cols=539 Identities=21% Similarity=0.236 Sum_probs=379.9
Q ss_pred HHHHHHHHhhhhhhccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEE
Q psy11770 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQ 147 (668)
Q Consensus 68 ~~~~~~~i~ilv~~iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 147 (668)
.+.++-++.|+...||+-||+=++++.-.+...|+|.+++|..|-++.-.|+||+.|||||||||+..|.|.++--....
T Consensus 427 YKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~ 506 (1160)
T KOG0209|consen 427 YKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD 506 (1160)
T ss_pred hheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC
Confidence 34677788899999999999999999999999999999999999999999999999999999999999999887542221
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHh------hhCCcc
Q psy11770 148 YKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVR------DDLPEE 221 (668)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~------~~~~~~ 221 (668)
.......++.+.+ -...++.||+.. ..+ ...+|||.|.|.++...+ +.+... ......
T Consensus 507 ~~~~~~~s~~p~~----t~~vlAscHsLv----~le-----~~lVGDPlEKA~l~~v~W---~~~k~~~v~p~~~~~~~l 570 (1160)
T KOG0209|consen 507 EGALTPASKAPNE----TVLVLASCHSLV----LLE-----DKLVGDPLEKATLEAVGW---NLEKKNSVCPREGNGKKL 570 (1160)
T ss_pred cccccchhhCCch----HHHHHHHHHHHH----Hhc-----CcccCChHHHHHHHhcCc---ccccCcccCCCcCCCccc
Confidence 1000011111222 233445566542 111 136899999999886532 222111 111235
Q ss_pred ceeeeeccCCCCceEEEEEeeC-----CeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcce
Q psy11770 222 VFTRVYTFNSVRKSMSTVIPKK-----NGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLR 296 (668)
Q Consensus 222 ~~~~~~~F~s~rk~msvvv~~~-----~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlR 296 (668)
+|.+.|.|+|..|||||+.... .++++.+|||||+|-++.+... +.+++...+|+++|.|
T Consensus 571 kI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP---------------~dY~~iYk~ytR~GsR 635 (1160)
T KOG0209|consen 571 KIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVP---------------KDYDEIYKRYTRQGSR 635 (1160)
T ss_pred chhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCc---------------hhHHHHHHHHhhccce
Confidence 6788999999999999998763 3689999999999998875431 2256778899999999
Q ss_pred eeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy11770 297 TISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARS 376 (668)
Q Consensus 297 vl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ 376 (668)
|||+|||.+..-..+ .....+++++|+||+|.|++.+.-|++++++++|+.|++++++++|+|||++.||.+
T Consensus 636 VLALg~K~l~~~~~~--------q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAch 707 (1160)
T KOG0209|consen 636 VLALGYKPLGDMMVS--------QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACH 707 (1160)
T ss_pred EEEEecccccccchh--------hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchhe
Confidence 999999998732111 111235788999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccCCCce---------------------------------------EEeehhhHHHhhhcCchhhhHHHHhhh
Q psy11770 377 IATKCGIVKPGEDY---------------------------------------LILEGKEFNRRVRDNNGEVQQNLLDKV 417 (668)
Q Consensus 377 ia~~~gi~~~~~~~---------------------------------------i~~~g~~~~~~~~~~~~~~~~~~l~~~ 417 (668)
+|+++|+.....-+ ++++|..++.+ ...+.+..+
T Consensus 708 Vak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l-------~~~~~l~~l 780 (1160)
T KOG0209|consen 708 VAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHL-------QATDQLRRL 780 (1160)
T ss_pred ehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHH-------hhhHHHHHh
Confidence 99999996542111 11222222221 123356677
Q ss_pred cCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH-----------------
Q psy11770 418 WPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV----------------- 480 (668)
Q Consensus 418 ~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~----------------- 480 (668)
...+.||||+.|.||..++..+ +..|+.++|||||.||+.|||+||||||.- ++.+.
T Consensus 781 ~~hv~VfARvaP~QKE~ii~tl-----K~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~ 854 (1160)
T KOG0209|consen 781 IPHVWVFARVAPKQKEFIITTL-----KKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEP 854 (1160)
T ss_pred hhheeEEEeeChhhHHHHHHHH-----HhcCeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhhhccccCc
Confidence 7888999999999999999986 668999999999999999999999999975 32210
Q ss_pred ------------------------------------------------------HHHhcchhcccCCchHHHHHHHHHHH
Q psy11770 481 ------------------------------------------------------AKEASDIILTDDNFSSIVKAVMWGRN 506 (668)
Q Consensus 481 ------------------------------------------------------ak~~ad~vl~~~~~~~i~~~l~~gR~ 506 (668)
|.-||.+.....+.+++.+.|+.||+
T Consensus 855 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRc 934 (1160)
T KOG0209|consen 855 AKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRC 934 (1160)
T ss_pred hhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcch
Confidence 01134444444567888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHH
Q psy11770 507 VYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKT 586 (668)
Q Consensus 507 ~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~ 586 (668)
..-+.-+.+... .-|... ...-++.++..+.-|++.|...-.+++. ...+.+....|-+.+.+++|. .++||..
T Consensus 935 tLVtTlQMfKIL-ALN~Li-sAYslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y 1008 (1160)
T KOG0209|consen 935 TLVTTLQMFKIL-ALNCLI-SAYSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL---PNIFNVY 1008 (1160)
T ss_pred hHHHHHHHHHHH-HHHHHH-HHHHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC---CCcchHH
Confidence 998765554432 222221 1122334555667788888887766554 344667788899999999884 4599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHHHHHHHH-HHhhcccCCcccccccccC
Q psy11770 587 MMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNE-INARKIHGQRNVFEGLFTT 665 (668)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~-~~~r~~~~~~~~~~~~~~n 665 (668)
.+..++.|-.+|...++++.--....-+-..+-+......+...+|..|..-...|+... .|-+ + +++.+.++.|
T Consensus 1009 ~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~---G-~PF~Esl~eN 1084 (1160)
T KOG0209|consen 1009 IILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQ---G-RPFRESLREN 1084 (1160)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhhhcc---C-cchhhhhhhc
Confidence 999999998888776665543222111000001111123345556666665555555542 2322 2 4677788888
Q ss_pred CCC
Q psy11770 666 HSV 668 (668)
Q Consensus 666 ~~~ 668 (668)
|-+
T Consensus 1085 K~l 1087 (1160)
T KOG0209|consen 1085 KGL 1087 (1160)
T ss_pred cch
Confidence 753
|
|
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-52 Score=455.11 Aligned_cols=433 Identities=25% Similarity=0.293 Sum_probs=331.2
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|||+..|+++..++|+|+.+||++.++.++.++++++++++|++...+.... -..| +..+..+|..+++++++|
T Consensus 470 ~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~--~~~~----~~~~~~a~~~aisVlviA 543 (951)
T KOG0207|consen 470 QIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKY--PRSF----FDAFSHAFQLAISVLVIA 543 (951)
T ss_pred HHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccC--cchh----hHHHHHHHHhhheEEEEE
Confidence 6899999999999999999999999999999999998888776544322111 1122 356678899999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|.+++|++...|....+++|+++|..+.+|.+.+|++|.||||||||+|++.|.++...++. .+...
T Consensus 544 CPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---------~~~~e 614 (951)
T KOG0207|consen 544 CPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---------ISLKE 614 (951)
T ss_pred CchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc---------ccHHH
Confidence 999999999999999999999999999999999999999999999999999999999998765431 12222
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
...+..+... ...+|...|++++++..+.. ..+ ...+..-.|.-+.+. +-+.
T Consensus 615 ~l~~v~a~Es-------------------~SeHPig~AIv~yak~~~~~------~~~-~~~~~~~~~pg~g~~--~~~~ 666 (951)
T KOG0207|consen 615 ALALVAAMES-------------------GSEHPIGKAIVDYAKEKLVE------PNP-EGVLSFEYFPGEGIY--VTVT 666 (951)
T ss_pred HHHHHHHHhc-------------------CCcCchHHHHHHHHHhcccc------cCc-cccceeecccCCCcc--cceE
Confidence 2222222221 12368999999999876511 111 111122223222222 1111
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
.+++. .+=|.-+.+... |... .++ .+..+++..+.|..+.+++.
T Consensus 667 ~~~~~--i~iGN~~~~~r~--------~~~~--~~~-----i~~~~~~~e~~g~tvv~v~v------------------- 710 (951)
T KOG0207|consen 667 VDGNE--VLIGNKEWMSRN--------GCSI--PDD-----ILDALTESERKGQTVVYVAV------------------- 710 (951)
T ss_pred EeeeE--EeechHHHHHhc--------CCCC--chh-----HHHhhhhHhhcCceEEEEEE-------------------
Confidence 12222 334665554332 2211 111 34566777889999999985
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|.+++|+++++|++|+++..+|+.||+.||+++|+|||+..+|.++|+++|+.
T Consensus 711 ----------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----------------- 763 (951)
T KOG0207|consen 711 ----------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----------------- 763 (951)
T ss_pred ----------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-----------------
Confidence 44899999999999999999999999999999999999999999999999973
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.|++...|+||.+.|+.+ |..+..|+|+|||.||+|+|.+|||||+|| .|++.|
T Consensus 764 --------------------~V~aev~P~~K~~~Ik~l-----q~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vA 817 (951)
T KOG0207|consen 764 --------------------NVYAEVLPEQKAEKIKEI-----QKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVA 817 (951)
T ss_pred --------------------eEEeccCchhhHHHHHHH-----HhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHH
Confidence 689999999999999997 556789999999999999999999999999 889999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHH---HHHHHHHHHhHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAV---QMLWVNLIMDTLAS 558 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~---~~l~~n~~~~~~~~ 558 (668)
.++||+++..|+..++..++..+|++..|++.++.|.+.||++.++++.. .|...+.-+.|| ..+..+.+...+.+
T Consensus 818 ieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAag-vF~P~~~~L~Pw~A~lama~SSvsVv~sS 896 (951)
T KOG0207|consen 818 IEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAG-VFAPFGIVLPPWMASLAMAASSVSVVLSS 896 (951)
T ss_pred HhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhee-cccCCccccCchHHHHHHHhhhHHHhhhH
Confidence 99999999999999999999999999999999999999999999888753 344333223333 33444444444445
Q ss_pred HHhc-ccCCC
Q psy11770 559 LALA-TEMPT 567 (668)
Q Consensus 559 l~l~-~~~~~ 567 (668)
+.|- +++|.
T Consensus 897 llLk~~k~p~ 906 (951)
T KOG0207|consen 897 LLLKRYKKPT 906 (951)
T ss_pred HHHhhccccc
Confidence 5444 34443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-51 Score=468.62 Aligned_cols=375 Identities=22% Similarity=0.327 Sum_probs=304.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||++..++++.+++|+|+.+|+++.++.++++.+++++++++.++ .+.+| ...+..++++++++
T Consensus 334 ~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~--------~~~~~--------~~~i~~a~svlvia 397 (741)
T PRK11033 334 RILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLL--------FAAPW--------QEWIYRGLTLLLIG 397 (741)
T ss_pred HHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------ccCCH--------HHHHHHHHHHHHHh
Confidence 466777888888999999999999999999988888877664321 12344 34677889999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|.+++|+++..+..+++|+|+++|+.+++|+|+++|+||||||||||+|+|+|.+++..+. .+++
T Consensus 398 cPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~----------~~~~- 466 (741)
T PRK11033 398 CPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG----------ISES- 466 (741)
T ss_pred chhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC----------CCHH-
Confidence 99999999999999999999999999999999999999999999999999999999999875321 1122
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEE-E
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTV-I 240 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvv-v 240 (668)
+.+..+.+.. ....+|.+.|+++++.+.+.+ +||.++++.+... +
T Consensus 467 -~~l~~aa~~e-----------------~~s~hPia~Ai~~~a~~~~~~----------------~~~~~~~~~~~g~Gv 512 (741)
T PRK11033 467 -ELLALAAAVE-----------------QGSTHPLAQAIVREAQVRGLA----------------IPEAESQRALAGSGI 512 (741)
T ss_pred -HHHHHHHHHh-----------------cCCCCHHHHHHHHHHHhcCCC----------------CCCCcceEEEeeEEE
Confidence 1111111111 113479999999988754432 4566677766421 2
Q ss_pred e--eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccC
Q psy11770 241 P--KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIE 318 (668)
Q Consensus 241 ~--~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~ 318 (668)
+ .+|+. +.-|+++.+.+ ++++ ..+.++.+..+|+|++++|+
T Consensus 513 ~~~~~g~~--~~ig~~~~~~~--------------~~~~-----~~~~~~~~~~~g~~~v~va~---------------- 555 (741)
T PRK11033 513 EGQVNGER--VLICAPGKLPP--------------LADA-----FAGQINELESAGKTVVLVLR---------------- 555 (741)
T ss_pred EEEECCEE--EEEecchhhhh--------------ccHH-----HHHHHHHHHhCCCEEEEEEE----------------
Confidence 2 14443 23478777643 1111 22345778899999999995
Q ss_pred CCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH
Q psy11770 319 GDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF 398 (668)
Q Consensus 319 ~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~ 398 (668)
|.+++|+++++|++|++++++|+.|++.|++++|+|||+..+|.++|+++|+.
T Consensus 556 -------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------- 608 (741)
T PRK11033 556 -------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------- 608 (741)
T ss_pred -------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--------------
Confidence 34899999999999999999999999999999999999999999999999992
Q ss_pred HHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCcc
Q psy11770 399 NRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGT 478 (668)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~ 478 (668)
.+++..|++|..+|+.++ . ++.|+|+|||.||+|||+.|||||+|| +++
T Consensus 609 ------------------------~~~~~~p~~K~~~v~~l~-----~-~~~v~mvGDgiNDapAl~~A~vgia~g-~~~ 657 (741)
T PRK11033 609 ------------------------FRAGLLPEDKVKAVTELN-----Q-HAPLAMVGDGINDAPAMKAASIGIAMG-SGT 657 (741)
T ss_pred ------------------------eecCCCHHHHHHHHHHHh-----c-CCCEEEEECCHHhHHHHHhCCeeEEec-CCC
Confidence 356789999999999873 2 358999999999999999999999999 899
Q ss_pred HHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 479 DVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 479 ~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
+.++++||+++.++++..+.+++..||++++||++++.|.+.+|++.+.+.+++
T Consensus 658 ~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 658 DVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred HHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999888777654
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-48 Score=434.55 Aligned_cols=382 Identities=29% Similarity=0.377 Sum_probs=298.2
Q ss_pred ccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhcc
Q psy11770 4 VEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVP 83 (668)
Q Consensus 4 v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~iP 83 (668)
.+..++.+.+++|+|+.+++++.++.++++++++++++++... +. + ..+..++++++++||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~---------~~-~---------~~~~~~~~vlv~~~P 209 (556)
T TIGR01525 149 VKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL---------GA-L---------GALYRALAVLVVACP 209 (556)
T ss_pred HHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cc-c---------hHHHHHHHHHhhccc
Confidence 3445566678999999999999999988888877766554321 00 0 467789999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHHHH
Q psy11770 84 EGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIAS 163 (668)
Q Consensus 84 ~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (668)
|+||++++++++.+..+|+++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+... ...++
T Consensus 210 ~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------~~~~~--- 279 (556)
T TIGR01525 210 CALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------ISEEE--- 279 (556)
T ss_pred cchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------ccHHH---
Confidence 99999999999999999999999999999999999999999999999999999999987643210 00112
Q ss_pred HHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEeeC
Q psy11770 164 KIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKK 243 (668)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~~ 243 (668)
++..+.... ....+|.+.|+++++.+.|.+... .+ + .+.+| +
T Consensus 280 -~l~~a~~~e----------------~~~~hp~~~Ai~~~~~~~~~~~~~---~~-~---~~~~~--------------~ 321 (556)
T TIGR01525 280 -LLALAAALE----------------QSSSHPLARAIVRYAKKRGLELPK---QE-D---VEEVP--------------G 321 (556)
T ss_pred -HHHHHHHHh----------------ccCCChHHHHHHHHHHhcCCCccc---cc-C---eeEec--------------C
Confidence 111111110 112479999999999876543211 00 0 01111 1
Q ss_pred CeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCC
Q psy11770 244 NGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNW 323 (668)
Q Consensus 244 ~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~ 323 (668)
.++..++||+++..+..|+.... ++.. . + + .++..+.++++|+|+++++.
T Consensus 322 ~gi~~~~~g~~~~~lg~~~~~~~-~~~~--~-~----~-~~~~~~~~~~~g~~~~~v~~--------------------- 371 (556)
T TIGR01525 322 KGVEATVDGQEEVRIGNPRLLEL-AAEP--I-S----A-SPDLLNEGESQGKTVVFVAV--------------------- 371 (556)
T ss_pred CeEEEEECCeeEEEEecHHHHhh-cCCC--c-h----h-hHHHHHHHhhCCcEEEEEEE---------------------
Confidence 23344455555555555543210 1110 0 1 1 12345678899999999984
Q ss_pred CcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhh
Q psy11770 324 DDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAG-ITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRV 402 (668)
Q Consensus 324 ~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aG-I~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~ 402 (668)
|.+++|.+.++|+++|+++++|+.|+++| ++++|+|||+..++..+++++|+.
T Consensus 372 --------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------ 425 (556)
T TIGR01525 372 --------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------ 425 (556)
T ss_pred --------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC------------------
Confidence 34899999999999999999999999999 999999999999999999999993
Q ss_pred hcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHH
Q psy11770 403 RDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK 482 (668)
Q Consensus 403 ~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak 482 (668)
.+|+++.|++|.++++.+ +..++.|+|+|||.||++|++.||+|+++| ++++.++
T Consensus 426 -------------------~~f~~~~p~~K~~~v~~l-----~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~ 480 (556)
T TIGR01525 426 -------------------EVHAELLPEDKLAIVKEL-----QEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAI 480 (556)
T ss_pred -------------------eeeccCCHHHHHHHHHHH-----HHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHH
Confidence 467889999999999987 445779999999999999999999999999 8999999
Q ss_pred HhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 483 EASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGA 533 (668)
Q Consensus 483 ~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~ 533 (668)
+.||+++.++++..+.+++..||++++++++++.|.+.+|++.+++++.+.
T Consensus 481 ~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 481 EAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred HhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999988776553
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-47 Score=442.62 Aligned_cols=379 Identities=25% Similarity=0.340 Sum_probs=298.9
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+++..++++..++|+|+..|+++.++.+++++++++++++|.. .. ....| ...+.+++++++++
T Consensus 414 ~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~---~~----~~~~~--------~~~~~~a~~vlv~a 478 (834)
T PRK10671 414 RIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYF---FG----PAPQI--------VYTLVIATTVLIIA 478 (834)
T ss_pred HHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC----CchHH--------HHHHHHHHHHHHHh
Confidence 45566677777899999999999999988888877766655432 11 01112 45677899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||||++++|+++..+..+++|+|+++|+++++|++|++|++|||||||||+|+|+|.++...+. .+++
T Consensus 479 cPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~----------~~~~- 547 (834)
T PRK10671 479 CPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG----------VDEA- 547 (834)
T ss_pred cccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC----------CCHH-
Confidence 99999999999999999999999999999999999999999999999999999999998764321 1111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCC-ceEEEEE
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVR-KSMSTVI 240 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~r-k~msvvv 240 (668)
+.+..+.+.+. ...+|.+.|+++++..... +. ..+|+... +.+...
T Consensus 548 -~~l~~a~~~e~-----------------~s~hp~a~Ai~~~~~~~~~---------~~-----~~~~~~~~g~Gv~~~- 594 (834)
T PRK10671 548 -QALRLAAALEQ-----------------GSSHPLARAILDKAGDMTL---------PQ-----VNGFRTLRGLGVSGE- 594 (834)
T ss_pred -HHHHHHHHHhC-----------------CCCCHHHHHHHHHHhhCCC---------CC-----cccceEecceEEEEE-
Confidence 12222222221 1246899999987753211 10 01222111 222222
Q ss_pred eeCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 241 PKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 241 ~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
.+|+. +.+|+++.+.+.. +..+ + ..+..+++.++|.+++++|+.
T Consensus 595 -~~g~~--~~~G~~~~~~~~~------------~~~~---~-~~~~~~~~~~~g~~~v~va~~----------------- 638 (834)
T PRK10671 595 -AEGHA--LLLGNQALLNEQQ------------VDTK---A-LEAEITAQASQGATPVLLAVD----------------- 638 (834)
T ss_pred -ECCEE--EEEeCHHHHHHcC------------CChH---H-HHHHHHHHHhCCCeEEEEEEC-----------------
Confidence 13432 4569998774321 1111 1 234566788999999999852
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
..++|++++.|+++|+++++|+.|++.|++++|+|||+..++..+++++|+.
T Consensus 639 ------------~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~---------------- 690 (834)
T PRK10671 639 ------------GKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID---------------- 690 (834)
T ss_pred ------------CEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC----------------
Confidence 3789999999999999999999999999999999999999999999999993
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
.++++..|++|.++++.+ +..++.|+|+|||.||++|++.||+||+|| ++++.
T Consensus 691 ---------------------~~~~~~~p~~K~~~i~~l-----~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~ 743 (834)
T PRK10671 691 ---------------------EVIAGVLPDGKAEAIKRL-----QSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDV 743 (834)
T ss_pred ---------------------EEEeCCCHHHHHHHHHHH-----hhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHH
Confidence 368889999999999986 556889999999999999999999999999 89999
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF 530 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 530 (668)
++++||+++.++++++|.++++.||+.+.++++++.|.+.+|++.+.+++
T Consensus 744 a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 744 AIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887765
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-47 Score=423.62 Aligned_cols=367 Identities=29% Similarity=0.371 Sum_probs=289.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++++.+++|+|+.+|+++.++.+++++++++++++| ...+.+++++++++
T Consensus 183 ~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~------------------------~~~~~~~~svlvva 238 (562)
T TIGR01511 183 QIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIW------------------------LFALEFAVTVLIIA 238 (562)
T ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHh
Confidence 455666777888999999999999998888777766554432 12577899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|++++|+++..+..+++++|+++|+++++|+|+++|+||||||||||+|+|+|.++...+. .+++
T Consensus 239 cPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~----------~~~~- 307 (562)
T TIGR01511 239 CPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGD----------RDRT- 307 (562)
T ss_pred ccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCC----------CCHH-
Confidence 99999999999999999999999999999999999999999999999999999999999864321 1111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+..+.+... ...+|.+.|+++++.+.+...... .. .+.+| .+.+...+
T Consensus 308 -~~l~~aa~~e~-----------------~s~HPia~Ai~~~~~~~~~~~~~~----~~---~~~~~----g~Gi~~~~- 357 (562)
T TIGR01511 308 -ELLALAAALEA-----------------GSEHPLAKAIVSYAKEKGITLVEV----SD---FKAIP----GIGVEGTV- 357 (562)
T ss_pred -HHHHHHHHHhc-----------------cCCChHHHHHHHHHHhcCCCcCCC----CC---eEEEC----CceEEEEE-
Confidence 11111111111 123699999999987765432110 00 11111 22333322
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
+++ -+..|+++.+.+. +. .++ ++.++|.+++.++.
T Consensus 358 -~g~--~~~iG~~~~~~~~--------~~--~~~-------------~~~~~g~~~~~~~~------------------- 392 (562)
T TIGR01511 358 -EGT--KIQLGNEKLLGEN--------AI--KID-------------GKAEQGSTSVLVAV------------------- 392 (562)
T ss_pred -CCE--EEEEECHHHHHhC--------CC--CCC-------------hhhhCCCEEEEEEE-------------------
Confidence 232 2445877765321 11 011 12357888887762
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|.+++|.+.++|+++|+++++|++|++.|++++|+|||+..++..+++++|+.
T Consensus 393 ----------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----------------- 445 (562)
T TIGR01511 393 ----------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----------------- 445 (562)
T ss_pred ----------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----------------
Confidence 45899999999999999999999999999999999999999999999999991
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
++++..|++|.++++.+ +.+++.|+|+|||.||++|++.||+||+|| ++++.+
T Consensus 446 ---------------------~~~~~~p~~K~~~v~~l-----~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a 498 (562)
T TIGR01511 446 ---------------------VRAEVLPDDKAALIKEL-----QEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVA 498 (562)
T ss_pred ---------------------EEccCChHHHHHHHHHH-----HHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHH
Confidence 46778999999999987 446789999999999999999999999999 899999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
++.||+++.+++++.+.+++..||++++++++++.|.+.+|++.+.+++.+
T Consensus 499 ~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~ 549 (562)
T TIGR01511 499 IEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGV 549 (562)
T ss_pred HhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999988776643
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >KOG0205|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-48 Score=405.09 Aligned_cols=407 Identities=25% Similarity=0.436 Sum_probs=303.8
Q ss_pred HHHHHHhhhhhh-ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEE----EEEc
Q psy11770 70 FFIVGVTVLVVA-VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQ----AYVC 144 (668)
Q Consensus 70 ~~~~~i~ilv~~-iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~----~~~~ 144 (668)
..+..+.++++. +|.|||.++++.++.|..||+++|.+++++.++|+|+.+|++|+|||||||.|+++|.+ ++..
T Consensus 276 ~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~ 355 (942)
T KOG0205|consen 276 DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVK 355 (942)
T ss_pred hhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeec
Confidence 344445555555 99999999999999999999999999999999999999999999999999999999876 3332
Q ss_pred CEEEecCCCCCCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCcccee
Q psy11770 145 EVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFT 224 (668)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~ 224 (668)
|. +++. .++.+... +. ....|..|.|+++.... ..+.+ ..++.+
T Consensus 356 gv-----------~~D~--~~L~A~rA-sr---------------~en~DAID~A~v~~L~d----PKear---a~ikev 399 (942)
T KOG0205|consen 356 GV-----------DKDD--VLLTAARA-SR---------------KENQDAIDAAIVGMLAD----PKEAR---AGIKEV 399 (942)
T ss_pred CC-----------ChHH--HHHHHHHH-hh---------------hcChhhHHHHHHHhhcC----HHHHh---hCceEE
Confidence 21 2221 12222111 10 11235788888876542 33333 345567
Q ss_pred eeeccCCCCceEEEEEee-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEe
Q psy11770 225 RVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYK 303 (668)
Q Consensus 225 ~~~~F~s~rk~msvvv~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k 303 (668)
+.+||++..||.+..+.+ +|+..-.+|||||.|++.|..- . + .++...+.+++|+++|+|.|++|++
T Consensus 400 hF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~----~-------~-i~~~vh~~id~~AeRGlRSLgVArq 467 (942)
T KOG0205|consen 400 HFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNED----H-------D-IPERVHSIIDKFAERGLRSLAVARQ 467 (942)
T ss_pred eeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhcc----C-------c-chHHHHHHHHHHHHhcchhhhhhhh
Confidence 889999999999988877 7778888999999999999631 1 1 1223567889999999999999999
Q ss_pred ecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy11770 304 DFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGI 383 (668)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 383 (668)
..++...+ .-...-.|+|+.-+-||+|.++.++|++...-|++|.|+|||...-++..++++|+
T Consensus 468 ~v~e~~~~----------------~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgm 531 (942)
T KOG0205|consen 468 EVPEKTKE----------------SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531 (942)
T ss_pred cccccccc----------------CCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhcc
Confidence 87654211 11234689999999999999999999999999999999999999999999999998
Q ss_pred ccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHH
Q psy11770 384 VKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPA 463 (668)
Q Consensus 384 ~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~m 463 (668)
-.+ ...+.++.... .++.+.....++.+++..-|+.+.|++|.++|+.| |..++.|+|+|||+||+|+
T Consensus 532 gtn-----mypss~llG~~--~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~L-----q~r~hi~gmtgdgvndapa 599 (942)
T KOG0205|consen 532 GTN-----MYPSSALLGLG--KDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKIL-----QERKHIVGMTGDGVNDAPA 599 (942)
T ss_pred ccC-----cCCchhhccCC--CCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHH-----hhcCceecccCCCcccchh
Confidence 332 01111111100 01111112233344445668999999999999996 7789999999999999999
Q ss_pred HhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhH
Q psy11770 464 LKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKA 543 (668)
Q Consensus 464 lk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~ 543 (668)
||.||+|||+. .+++.|+.+||+|++....+.+..++..+|.+|.|++.+..|.++..+-.+ +.|.........-|++
T Consensus 600 LKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv-~gfml~alIw~~df~p 677 (942)
T KOG0205|consen 600 LKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLIALIWEFDFSP 677 (942)
T ss_pred hcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHHHHHHHhcCCH
Confidence 99999999999 999999999999999999999999999999999999999999988776654 2222222223334455
Q ss_pred HHHHHHHHHHh
Q psy11770 544 VQMLWVNLIMD 554 (668)
Q Consensus 544 ~~~l~~n~~~~ 554 (668)
...+++-++-|
T Consensus 678 fmvliiailnd 688 (942)
T KOG0205|consen 678 FMVLIIAILND 688 (942)
T ss_pred HHHHHHHHhcC
Confidence 55555444333
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=418.62 Aligned_cols=363 Identities=25% Similarity=0.354 Sum_probs=285.2
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++.+.+++|+|+.+++++.++.++.+++++++++++.. . . .| ...+.+++++++++
T Consensus 146 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~--~~--------~~~~~~~~svlv~~ 207 (536)
T TIGR01512 146 KIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---L-----K--RW--------PFWVYRALVLLVVA 207 (536)
T ss_pred HHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h-----c--cc--------HHHHHHHHHHHhhc
Confidence 34556666777899999999999999988887777655543221 0 1 12 12677789999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||+++++++..+..+++|+|+++|+++++|++|+++++|||||||||+|+|+|.+++.. +
T Consensus 208 ~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------~- 271 (536)
T TIGR01512 208 SPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------E- 271 (536)
T ss_pred CccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------H-
Confidence 999999999999999999999999999999999999999999999999999999999887520 1
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.+..+.+.. ....+|.+.|+++++.+.+ . ... ...+| .+.+...+
T Consensus 272 --~l~~a~~~e-----------------~~~~hp~~~Ai~~~~~~~~-~-------~~~---~~~~~----g~gi~~~~- 316 (536)
T TIGR01512 272 --VLRLAAAAE-----------------QASSHPLARAIVDYARKRE-N-------VES---VEEVP----GEGVRAVV- 316 (536)
T ss_pred --HHHHHHHHh-----------------ccCCCcHHHHHHHHHHhcC-C-------Ccc---eEEec----CCeEEEEE-
Confidence 111111111 1124699999999887543 1 000 11112 12222222
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
++.. +..|+++.+.+.. .+.+..+|.+++.++
T Consensus 317 -~g~~--~~ig~~~~~~~~~-------------------------~~~~~~~~~~~~~v~-------------------- 348 (536)
T TIGR01512 317 -DGGE--VRIGNPRSLEAAV-------------------------GARPESAGKTIVHVA-------------------- 348 (536)
T ss_pred -CCeE--EEEcCHHHHhhcC-------------------------CcchhhCCCeEEEEE--------------------
Confidence 3332 2347765442210 013445677776665
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI-TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
.|..++|.+.++|+++|+++++|+.|+++|+ +++|+|||+..++..+++++|+.
T Consensus 349 ---------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~---------------- 403 (536)
T TIGR01512 349 ---------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID---------------- 403 (536)
T ss_pred ---------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh----------------
Confidence 2458999999999999999999999999999 99999999999999999999993
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
.+|++..|++|.++++.+ +..++.|+|+|||.||++|++.||+||++|.++++.
T Consensus 404 ---------------------~~f~~~~p~~K~~~i~~l-----~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 457 (536)
T TIGR01512 404 ---------------------EVHAELLPEDKLEIVKEL-----REKYGPVAMVGDGINDAPALAAADVGIAMGASGSDV 457 (536)
T ss_pred ---------------------hhhhccCcHHHHHHHHHH-----HhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH
Confidence 356788899999999986 456789999999999999999999999999668899
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
++++||+++.++++..+.+++..||++++++++++.|.+.+|++.+.+.+++
T Consensus 458 ~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 458 AIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999988887755
|
. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=328.99 Aligned_cols=382 Identities=24% Similarity=0.321 Sum_probs=281.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||....+.++.+|||=+..++-+-.-+.. ..++.+..+. -+..|.. +... .+..-++++++.
T Consensus 199 rMI~LVEgA~R~KTPNEIAL~iLL~~LTl-----iFL~~~~Tl~--p~a~y~~-g~~~----------~i~~LiALlV~L 260 (681)
T COG2216 199 RMIALVEGAERQKTPNEIALTILLSGLTL-----IFLLAVATLY--PFAIYSG-GGAA----------SVTVLVALLVCL 260 (681)
T ss_pred HHHHHhhchhccCChhHHHHHHHHHHHHH-----HHHHHHHhhh--hHHHHcC-CCCc----------CHHHHHHHHHHH
Confidence 56667888889999988776655433322 1111111111 1111110 1111 233455788899
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
+|-.+.-.++..=..|+.|+.+.|++.++..++|.+|.||++..|||||+|-|+-.-.+++..+. .+
T Consensus 261 IPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g----------v~--- 327 (681)
T COG2216 261 IPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG----------VS--- 327 (681)
T ss_pred hcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCC----------CC---
Confidence 99999888888888899999999999999999999999999999999999988766655554332 11
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.+.+..+...++-+. ..|...+++.++++.+......... ......||+.+.|++.+-.+
T Consensus 328 ~~~la~aa~lsSl~D----------------eTpEGrSIV~LA~~~~~~~~~~~~~----~~~~fvpFtA~TRmSGvd~~ 387 (681)
T COG2216 328 EEELADAAQLASLAD----------------ETPEGRSIVELAKKLGIELREDDLQ----SHAEFVPFTAQTRMSGVDLP 387 (681)
T ss_pred HHHHHHHHHHhhhcc----------------CCCCcccHHHHHHHhccCCCccccc----ccceeeecceecccccccCC
Confidence 122333333332211 1255567889998877543321111 01245799988765555433
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
++ .-+-|||.+.+....+. ++|+. ++ .++...++-++.|-..|+++.
T Consensus 388 -~~--~~irKGA~dai~~~v~~---~~g~~---p~-----~l~~~~~~vs~~GGTPL~V~~------------------- 434 (681)
T COG2216 388 -GG--REIRKGAVDAIRRYVRE---RGGHI---PE-----DLDAAVDEVSRLGGTPLVVVE------------------- 434 (681)
T ss_pred -CC--ceeecccHHHHHHHHHh---cCCCC---CH-----HHHHHHHHHHhcCCCceEEEE-------------------
Confidence 22 45679999999987763 23322 12 245677889999999999873
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|-.++|.+.++|-++|+.+|-+.+||+.|||.+|+||||+.||..||++.|++
T Consensus 435 ----------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD----------------- 487 (681)
T COG2216 435 ----------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD----------------- 487 (681)
T ss_pred ----------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch-----------------
Confidence 44899999999999999999999999999999999999999999999999994
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
...+.++||+|.++++.- |..|+-|+|+|||.||+|+|.+||||+||. +|++.|
T Consensus 488 --------------------dfiAeatPEdK~~~I~~e-----Q~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAA 541 (681)
T COG2216 488 --------------------DFIAEATPEDKLALIRQE-----QAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 541 (681)
T ss_pred --------------------hhhhcCChHHHHHHHHHH-----HhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHH
Confidence 246889999999999974 788999999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLT 520 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~ 520 (668)
|++++++=.|++...+.+.+.-|++..-.=-....|++.
T Consensus 542 kEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIA 580 (681)
T COG2216 542 KEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIA 580 (681)
T ss_pred HHhhcccccCCCccceehHhhhhhhheeecccceeeehh
Confidence 999999999999999999999998776543333444443
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=200.54 Aligned_cols=97 Identities=41% Similarity=0.658 Sum_probs=89.7
Q ss_pred CeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhH
Q psy11770 332 HLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQ 411 (668)
Q Consensus 332 ~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~ 411 (668)
++.++|.+.+.|++++++.++|+.|+++|++++|+|||+..++..+++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 56999999999999999999999999999999999999999999999999992
Q ss_pred HHHhhhcCCcEEEEec--CHhhH--HHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC
Q psy11770 412 NLLDKVWPRLRVLARS--SPSDK--YTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD 468 (668)
Q Consensus 412 ~~l~~~~~~~~v~~r~--~p~~K--~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~ 468 (668)
+..++++. +|++| .++++.+ +.+++.|+|+|||.||++|+++||
T Consensus 168 --------~~~v~a~~~~kP~~k~~~~~i~~l-----~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 168 --------DSIVFARVIGKPEPKIFLRIIKEL-----QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --------SEEEEESHETTTHHHHHHHHHHHH-----TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred --------cccccccccccccchhHHHHHHHH-----hcCCCEEEEEccCHHHHHHHHhCc
Confidence 22589999 99999 8888885 667779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.5e-17 Score=156.05 Aligned_cols=125 Identities=33% Similarity=0.547 Sum_probs=97.7
Q ss_pred CCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q psy11770 538 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPT 617 (668)
Q Consensus 538 ~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (668)
|.|+++.|+||+|+++|.+|+++++.|+|++++|+|+|+++++++++++++..++.+|++++++.++.++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999998887776654333221
Q ss_pred CCCCCCCCcccchhhHHHHHHHHHHHHHHHHhhcccCCcccc--cccccCCC
Q psy11770 618 GRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVF--EGLFTTHS 667 (668)
Q Consensus 618 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~--~~~~~n~~ 667 (668)
.. ......+++|++|++++++|++|.+++|+.+. +.| .++++|++
T Consensus 81 ~~---~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~--~~~~~~~~~~N~~ 127 (182)
T PF00689_consen 81 ET---NNDNLAQAQTMAFTALVLSQLFNAFNCRSRRR--SVFRFRGIFSNKW 127 (182)
T ss_dssp HH---HTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSS--TCTT-STGGGSHH
T ss_pred cc---chhHHHHHHHHHHHHHHHHHHhhhcccccccc--cceecccccccch
Confidence 10 00113468999999999999999999998654 454 48888975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-14 Score=121.96 Aligned_cols=126 Identities=25% Similarity=0.359 Sum_probs=108.2
Q ss_pred eEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHH
Q psy11770 333 LTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 412 (668)
Q Consensus 333 l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~ 412 (668)
+...+.++---++-++++++|++|++. +++.++|||..-+....|+-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 466778888889999999999999999 99999999999999999999998321
Q ss_pred HHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEee-C-CCccHHHHHhcchhcc
Q psy11770 413 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM-G-ITGTDVAKEASDIILT 490 (668)
Q Consensus 413 ~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam-~-~~~~~~ak~~ad~vl~ 490 (668)
.+++-..|+.|.++++.| +.+++.|+|+|||.||.+||+.||+||+. + .+..+.+.++||+++.
T Consensus 72 ---------rv~a~a~~e~K~~ii~eL-----kk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 72 ---------RVFAGADPEMKAKIIREL-----KKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred ---------eeecccCHHHHHHHHHHh-----cCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 688999999999999997 55789999999999999999999999984 4 1345667899999998
Q ss_pred cCCchHHHHHH
Q psy11770 491 DDNFSSIVKAV 501 (668)
Q Consensus 491 ~~~~~~i~~~l 501 (668)
+...+.+++
T Consensus 138 --~i~e~ldl~ 146 (152)
T COG4087 138 --EIAEILDLL 146 (152)
T ss_pred --hHHHHHHHh
Confidence 566666554
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-14 Score=148.25 Aligned_cols=71 Identities=27% Similarity=0.303 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.+.+. ++...+.|+++|||.||++||+.|++||||+ |+.+.+|++||+|+.+++.+++.++|++
T Consensus 196 sKg~al~~l~~~-~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEH-LGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHH-hCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 688888877665 6888899999999999999999999999999 9999999999999999999999998863
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.53 E-value=3e-14 Score=119.46 Aligned_cols=71 Identities=37% Similarity=0.624 Sum_probs=59.6
Q ss_pred cccChhHHHHHHHHHHcCC--ChHHHhhhCCccceeeeeccCCCCceEEEEEeeCCeEEEEEcCchHHHHhhcccc
Q psy11770 191 QVGNKTECALLGFVVAIGK--NYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYI 264 (668)
Q Consensus 191 ~~g~p~e~al~~~~~~~g~--~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~~~~~~~~~KGa~e~il~~c~~~ 264 (668)
..|+|+|.||+.++.+.|. +....+..+ .+++++||+|+||||+|++++++.+.+|+|||||.|+++|+++
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~---~~~~~~pF~S~rK~msvv~~~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKY---KIVAEIPFDSERKRMSVVVRNDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhc---ceeEEEccCcccceeEEEEeCCCEEEEEcCCChHHHHHhcCCC
Confidence 7899999999999999854 455555554 4588999999999999999944457779999999999999853
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-13 Score=139.46 Aligned_cols=155 Identities=24% Similarity=0.341 Sum_probs=113.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHH--------------------Hhhh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN--------------------RRVR 403 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~--------------------~~~~ 403 (668)
++.+.+.++|+++++.|++++++|||+...+..+.+++++.. .++..+|..+. ....
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~ 96 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDVEELLELLE 96 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHH
Confidence 389999999999999999999999999999999999999953 23333332110 0000
Q ss_pred cC----------c------------------------------------------hhhhHH---HHhhhcC-CcEEEEec
Q psy11770 404 DN----------N------------------------------------------GEVQQN---LLDKVWP-RLRVLARS 427 (668)
Q Consensus 404 ~~----------~------------------------------------------~~~~~~---~l~~~~~-~~~v~~r~ 427 (668)
+. . .....+ .+.+... ....+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s 176 (264)
T COG0561 97 DFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSS 176 (264)
T ss_pred hccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEc
Confidence 00 0 000000 1111111 12223322
Q ss_pred CH---------hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHH
Q psy11770 428 SP---------SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 428 ~p---------~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~ 498 (668)
.+ .+|...++.+.+. ++...+.|+++||+.||.+||+.|+.||||| |+.+.+|+.||++..+++.+++.
T Consensus 177 ~~~~lei~~~g~~K~~al~~l~~~-lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~ 254 (264)
T COG0561 177 GPISLDITPKGVSKGYALQRLAKL-LGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVA 254 (264)
T ss_pred CCceEEEecCCCchHHHHHHHHHH-hCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHH
Confidence 22 3799999998774 6888788999999999999999999999999 99999999999998999999999
Q ss_pred HHHHH
Q psy11770 499 KAVMW 503 (668)
Q Consensus 499 ~~l~~ 503 (668)
++|++
T Consensus 255 ~~l~~ 259 (264)
T COG0561 255 EALEK 259 (264)
T ss_pred HHHHH
Confidence 99875
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-13 Score=139.69 Aligned_cols=166 Identities=14% Similarity=0.154 Sum_probs=113.2
Q ss_pred CeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----CCceEE-eehhh---------
Q psy11770 332 HLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKP----GEDYLI-LEGKE--------- 397 (668)
Q Consensus 332 ~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~----~~~~i~-~~g~~--------- 397 (668)
|.|++. -...+.+.+.++|++|+++|++++++|||+...+..+.+++|+..+ ++..+. .+++.
T Consensus 10 DGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 445553 1335899999999999999999999999999999999999998421 222221 11110
Q ss_pred -HHHh---hhcC-----------------chh-------------------h------------hHH-------HHhhhc
Q psy11770 398 -FNRR---VRDN-----------------NGE-------------------V------------QQN-------LLDKVW 418 (668)
Q Consensus 398 -~~~~---~~~~-----------------~~~-------------------~------------~~~-------~l~~~~ 418 (668)
.... .... ... . ..+ .+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 166 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEAL 166 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHh
Confidence 0000 0000 000 0 000 011111
Q ss_pred C-CcEE------EEecCHh--hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcch--
Q psy11770 419 P-RLRV------LARSSPS--DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI-- 487 (668)
Q Consensus 419 ~-~~~v------~~r~~p~--~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~-- 487 (668)
. ...+ +....|. +|...++.+.+. ++...+.|+++|||.||++||+.|+.||||+ |+.+.+|++||+
T Consensus 167 ~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~-~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~ 244 (272)
T PRK15126 167 GERAHLCFSATDCLEVLPVGCNKGAALAVLSQH-LGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLP 244 (272)
T ss_pred cCCEEEEEcCCcEEEeecCCCChHHHHHHHHHH-hCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCe
Confidence 1 1111 1122332 699999888765 6888899999999999999999999999999 999999999997
Q ss_pred hcccCCchHHHHHHH
Q psy11770 488 ILTDDNFSSIVKAVM 502 (668)
Q Consensus 488 vl~~~~~~~i~~~l~ 502 (668)
++.+++.+++.++|+
T Consensus 245 v~~~n~edGva~~l~ 259 (272)
T PRK15126 245 VIGHCRNQAVSHYLT 259 (272)
T ss_pred ecCCCcchHHHHHHH
Confidence 777889999999885
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.9e-13 Score=137.52 Aligned_cols=71 Identities=17% Similarity=0.192 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcc--hhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD--IILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad--~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.+.+. ++...+.|+++|||.||++||+.|++||||+ |+.+.+|++|| +++.+++.+++.++|++
T Consensus 190 sKg~al~~l~~~-lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKK-LGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHH-cCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 688888887665 6888899999999999999999999999999 99999999988 78888899999998863
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.1e-13 Score=134.24 Aligned_cols=155 Identities=23% Similarity=0.286 Sum_probs=110.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH--------------------HHhhh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF--------------------NRRVR 403 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~--------------------~~~~~ 403 (668)
.+.+.+.++|++++++|++++++|||+...+..+++.+|+.. .++..+|..+ .....
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 488999999999999999999999999999999999999842 1222222110 00000
Q ss_pred c-----------Cch---------------hhhHHHHhhhcCCcEE-----EEecCHh--hHHHHHHHHHHhhcCCCCCE
Q psy11770 404 D-----------NNG---------------EVQQNLLDKVWPRLRV-----LARSSPS--DKYTLVKGMIDSKISAGREV 450 (668)
Q Consensus 404 ~-----------~~~---------------~~~~~~l~~~~~~~~v-----~~r~~p~--~K~~iv~~l~~~~~~~~~~~ 450 (668)
. ... ....+.++.......+ +....|. +|...++.+.+. ++...+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~-~~i~~~~ 175 (230)
T PRK01158 97 KRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAEL-MGIDPEE 175 (230)
T ss_pred HhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHH-hCCCHHH
Confidence 0 000 0000111111111111 1233333 599999988765 6788889
Q ss_pred EEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 451 VAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 451 v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
++++||+.||.+|++.|++|+||+ |+.+.+|++||+++.+++-+++.++|++
T Consensus 176 ~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 176 VAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred EEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999998863
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-12 Score=129.92 Aligned_cols=154 Identities=21% Similarity=0.251 Sum_probs=107.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH-------------------hhhc
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR-------------------RVRD 404 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~-------------------~~~~ 404 (668)
.+.+.+.++|++++++|++++++|||++..+..+++++|+.. .++..+|..+.. ....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 488999999999999999999999999999999999999532 122222221100 0000
Q ss_pred C-------------c-----------hhhhHHHHhhhcCCcEE-----EEecCH--hhHHHHHHHHHHhhcCCCCCEEEE
Q psy11770 405 N-------------N-----------GEVQQNLLDKVWPRLRV-----LARSSP--SDKYTLVKGMIDSKISAGREVVAV 453 (668)
Q Consensus 405 ~-------------~-----------~~~~~~~l~~~~~~~~v-----~~r~~p--~~K~~iv~~l~~~~~~~~~~~v~~ 453 (668)
. . .+.....++.......+ +....| .+|...++.+.++ ++...+.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~-~~i~~~~~i~ 170 (225)
T TIGR01482 92 KTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEK-LGIKPGETLV 170 (225)
T ss_pred cccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHH-hCCCHHHEEE
Confidence 0 0 00000111111111111 112222 4799999988765 6778889999
Q ss_pred EcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH----HHHHHH
Q psy11770 454 TGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS----IVKAVM 502 (668)
Q Consensus 454 iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~----i~~~l~ 502 (668)
+||+.||.+|++.|++|+||+ |+.+.+|+.||+++.+++.++ +.+.|+
T Consensus 171 ~GD~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 171 CGDSENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred ECCCHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999 999999999999999888999 766664
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-12 Score=131.84 Aligned_cols=154 Identities=25% Similarity=0.373 Sum_probs=110.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH------------------H---Hh
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF------------------N---RR 401 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~------------------~---~~ 401 (668)
..+.+++.++|++++++|++++++|||++..+..+..++++. ...+..+|..+ . ..
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALIDDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceeeecccccchhhheeccchhheeeh
Confidence 458899999999999999999999999999999999999984 22333333211 0 00
Q ss_pred hhcC----------------c--------------------------------------hh---hhHHHHhhhcCCcEEE
Q psy11770 402 VRDN----------------N--------------------------------------GE---VQQNLLDKVWPRLRVL 424 (668)
Q Consensus 402 ~~~~----------------~--------------------------------------~~---~~~~~l~~~~~~~~v~ 424 (668)
.... . .. .....+.+.......+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDV 170 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeE
Confidence 0000 0 00 0011222222221122
Q ss_pred E-------ec--CHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCch
Q psy11770 425 A-------RS--SPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFS 495 (668)
Q Consensus 425 ~-------r~--~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~ 495 (668)
. .. ...+|...++.+.+. ++...+.++++||+.||.+||+.|+.||||+ |+++.++..||+++.+++-+
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~-~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~ 248 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEY-LGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDD 248 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHH-HTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCT
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhh-cccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCC
Confidence 2 22 235899999998765 6888899999999999999999999999999 99999999999999988779
Q ss_pred HHHHHH
Q psy11770 496 SIVKAV 501 (668)
Q Consensus 496 ~i~~~l 501 (668)
+++++|
T Consensus 249 gv~~~i 254 (254)
T PF08282_consen 249 GVAKAI 254 (254)
T ss_dssp HHHHHH
T ss_pred hHHHhC
Confidence 998865
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.9e-13 Score=132.18 Aligned_cols=153 Identities=21% Similarity=0.278 Sum_probs=107.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH--------------hhhc--C--
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR--------------RVRD--N-- 405 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~--------------~~~~--~-- 405 (668)
++.+++.++|++|+++|++++++|||++..+..+++.+++..+ ++..+|..+.. .... .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~---~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGP---VVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKR 94 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCc---EEEccCcEEEeCCCcEEEecccchhhHHHhhhhh
Confidence 5889999999999999999999999999999999999997422 22222211100 0000 0
Q ss_pred --------c----------hhhhHHHHhhhcC--CcEE-----EEe--cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc
Q psy11770 406 --------N----------GEVQQNLLDKVWP--RLRV-----LAR--SSPSDKYTLVKGMIDSKISAGREVVAVTGDGT 458 (668)
Q Consensus 406 --------~----------~~~~~~~l~~~~~--~~~v-----~~r--~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ 458 (668)
. .....+.+.+... ...+ +.. ....+|...++.+++. ++...+.++++||+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~-~~i~~~~~i~iGDs~ 173 (215)
T TIGR01487 95 FPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKEL-LGIKPEEVAAIGDSE 173 (215)
T ss_pred hhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHH-hCCCHHHEEEECCCH
Confidence 0 0000011111111 1111 112 2235899999988765 577778899999999
Q ss_pred cCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 459 NDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 459 ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
||.+|++.|++|+||+ |+.+.+|+.||+++.+++-+++.++|
T Consensus 174 ND~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 174 NDIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 9999999999999999 99999999999999988888887653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-12 Score=144.70 Aligned_cols=71 Identities=24% Similarity=0.393 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.+.+. ++...+.|++||||.||++||+.|++||||| ||.+.+|++||+|+.+++.++|.++|++
T Consensus 507 SKG~ALk~L~e~-lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNH-LGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHH-cCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 577777776654 6888889999999999999999999999999 9999999999999999999999998863
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.6e-12 Score=131.97 Aligned_cols=70 Identities=26% Similarity=0.365 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
+|...++.+.+. ++...+.+++|||+.||++|++.|++||+|| |+.+.+|+.||+++.+++.+++.++|+
T Consensus 199 ~K~~~l~~l~~~-~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEA-QGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHH-cCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 688888777654 6778889999999999999999999999999 999999999999999999999999886
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.24 E-value=5e-11 Score=122.16 Aligned_cols=158 Identities=11% Similarity=0.127 Sum_probs=104.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCCceEEeehh-----------------hHH--
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK-----PGEDYLILEGK-----------------EFN-- 399 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~-----~~~~~i~~~g~-----------------~~~-- 399 (668)
.+.+.+.++|++|+++|++++++|||+...+..+++++|+.. .++..+...+. ...
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 466889999999999999999999999999999999999731 22322221100 000
Q ss_pred -HhhhcC-c-------h----hh---------------------------hHHH---HhhhcC--CcEE-----EEecCH
Q psy11770 400 -RRVRDN-N-------G----EV---------------------------QQNL---LDKVWP--RLRV-----LARSSP 429 (668)
Q Consensus 400 -~~~~~~-~-------~----~~---------------------------~~~~---l~~~~~--~~~v-----~~r~~p 429 (668)
...... . . .. ..+. +.+.+. .+.+ +-...|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~ 183 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLD 183 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEec
Confidence 000000 0 0 00 0000 000000 1111 112233
Q ss_pred --hhHHHHHHHHHHhhcCC---CCCEEEEEcCCccCHHHHhhCCccEeeCCCcc-HH-----HHHhcchhcccCCchHHH
Q psy11770 430 --SDKYTLVKGMIDSKISA---GREVVAVTGDGTNDGPALKKADVGFAMGITGT-DV-----AKEASDIILTDDNFSSIV 498 (668)
Q Consensus 430 --~~K~~iv~~l~~~~~~~---~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~-~~-----ak~~ad~vl~~~~~~~i~ 498 (668)
.+|...++.+.+. ++. +.+.|+++|||.||++||+.|++||||| ++. +. .+..+|+++...+-+++.
T Consensus 184 ~g~sKg~al~~l~~~-lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~ 261 (271)
T PRK03669 184 ASAGKDQAANWLIAT-YQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWR 261 (271)
T ss_pred CCCCHHHHHHHHHHH-HHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHH
Confidence 3788888887765 677 8899999999999999999999999999 554 32 445799999988999999
Q ss_pred HHHHH
Q psy11770 499 KAVMW 503 (668)
Q Consensus 499 ~~l~~ 503 (668)
+++++
T Consensus 262 ~~l~~ 266 (271)
T PRK03669 262 EGLDH 266 (271)
T ss_pred HHHHH
Confidence 98864
|
|
| >KOG4383|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=8.6e-10 Score=117.42 Aligned_cols=312 Identities=15% Similarity=0.225 Sum_probs=206.8
Q ss_pred CchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcc--eeeEEEEeecccch-----------------hhh
Q psy11770 252 GASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGL--RTISIAYKDFVTDK-----------------AEI 312 (668)
Q Consensus 252 Ga~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl--Rvl~~A~k~l~~~~-----------------~~~ 312 (668)
|-.+...+.|+.+++ +.+..|+....+++ ..+.|.+..+ .+++||||...-.- ...
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkk----V~DFY~RaclsG~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI 772 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKK----VKDFYLRACLSGHCLAFAYKPCFCALASQLAGKCIELPLNPEHSKI 772 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHH----HHHHHHHHhhcccchheecccHHHHHHHHhCCceEEeccCcccchh
Confidence 566778899999885 45667776655543 2344444433 58889998642110 000
Q ss_pred hh----cc---cC---------CCCCC----Cc--ccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCC
Q psy11770 313 NQ----VH---IE---------GDPNW----DD--ESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDN 370 (668)
Q Consensus 313 ~~----~~---~~---------~~~~~----~~--~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~ 370 (668)
.. .+ ++ .+... .+ -+..-++.+|.|++.+..+.+++....|+.|-++-||++..|-.+
T Consensus 773 ~T~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~Ed 852 (1354)
T KOG4383|consen 773 ETACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKED 852 (1354)
T ss_pred hhhccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchH
Confidence 00 00 00 00000 00 012236789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccCCCceEEeehhh------------------------HHHhhhcC-chh-----------------
Q psy11770 371 INTARSIATKCGIVKPGEDYLILEGKE------------------------FNRRVRDN-NGE----------------- 408 (668)
Q Consensus 371 ~~ta~~ia~~~gi~~~~~~~i~~~g~~------------------------~~~~~~~~-~~~----------------- 408 (668)
....+-.|+++|+...+++.+.+..++ +++...++ +++
T Consensus 853 ELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ 932 (1354)
T KOG4383|consen 853 ELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKM 932 (1354)
T ss_pred HHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccc
Confidence 999999999999988877777664321 11110000 000
Q ss_pred ------------------------hhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccC--HH
Q psy11770 409 ------------------------VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTND--GP 462 (668)
Q Consensus 409 ------------------------~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND--~~ 462 (668)
..-+.++++..-+-.|..++|+.--++++.+ |..|+++++.|...|- .-
T Consensus 933 dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIM-----QE~GEVtcclGS~aN~rNSc 1007 (1354)
T KOG4383|consen 933 DSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIM-----QENGEVTCCLGSCANARNSC 1007 (1354)
T ss_pred ccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHH-----HHcCcEEEEeccccccccce
Confidence 0001112222223468999999999999986 6789999999999884 44
Q ss_pred HHhhCCccEeeCCC------------ccHH-HHHh-----------------cchhcccCCchHHHHHHHHHHHHHHHHH
Q psy11770 463 ALKKADVGFAMGIT------------GTDV-AKEA-----------------SDIILTDDNFSSIVKAVMWGRNVYDSIS 512 (668)
Q Consensus 463 mlk~A~vGIam~~~------------~~~~-ak~~-----------------ad~vl~~~~~~~i~~~l~~gR~~~~~i~ 512 (668)
.+-+||++||+..- ++.. ..++ +|+.......-.+.++|+-+|.....+|
T Consensus 1008 iflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R 1087 (1354)
T KOG4383|consen 1008 IFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFR 1087 (1354)
T ss_pred EEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhH
Confidence 56789999987421 1111 1122 2233322223345677888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHH-hcccCCCcccccc
Q psy11770 513 KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA-LATEMPTPDLLLR 573 (668)
Q Consensus 513 ~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~-l~~~~~~~~l~~~ 573 (668)
++++|.++..+....+++++.++..+.-|+-.+++|...+-..+..+. +...++.+.+|-+
T Consensus 1088 ~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1088 HCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEe
Confidence 999999999999999999999988888899999999988766555554 4455555555544
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-10 Score=118.38 Aligned_cols=69 Identities=26% Similarity=0.368 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
+|...++.+++. ++...+.++++||+.||++|++.|++|+||+ ++.+.+|+.||+++.+++.+++.++|
T Consensus 188 ~K~~~i~~~~~~-~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEA-LGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHH-cCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhhC
Confidence 699999988765 6777889999999999999999999999999 99999999999999988888887653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-10 Score=121.17 Aligned_cols=135 Identities=18% Similarity=0.247 Sum_probs=104.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..--.+.+.+.+..+.. .+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg---------------------~v 239 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG---------------------NV 239 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe---------------------Ee
Confidence 589999999999999999999999999888889999999842111111111000000 00
Q ss_pred EE-ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 424 LA-RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 424 ~~-r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.. -+..+.|.+.++.+.++ ++...+.++++|||.||++|++.||+|||| |+.+.+++.||.++..++++++..++-
T Consensus 240 ~g~iv~~k~K~~~L~~la~~-lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 240 LGDIVDAQYKADTLTRLAQE-YEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cCccCCcccHHHHHHHHHHH-cCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 10 12346789999888665 577888999999999999999999999999 799999999999999888998887764
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.8e-10 Score=117.03 Aligned_cols=72 Identities=18% Similarity=0.103 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHHhhcCCC--CCEEEEEcCCccCHHHHhhCCccEeeCCCcc---HHHHHh--c-chhcccCCchHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAG--REVVAVTGDGTNDGPALKKADVGFAMGITGT---DVAKEA--S-DIILTDDNFSSIVKAV 501 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~--~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~---~~ak~~--a-d~vl~~~~~~~i~~~l 501 (668)
..|...++.+.+. ++.. .+.++++||+.||.+|++.|++||||+ |+. +.+|+. | ++++.+++-+|+.++|
T Consensus 175 ~~Kg~ai~~l~~~-~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l 252 (256)
T TIGR01486 175 SDKGKAANALKQF-YNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREAL 252 (256)
T ss_pred CCHHHHHHHHHHH-HhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHH
Confidence 3788888887665 5777 889999999999999999999999999 887 478886 4 5899899999999988
Q ss_pred HH
Q psy11770 502 MW 503 (668)
Q Consensus 502 ~~ 503 (668)
++
T Consensus 253 ~~ 254 (256)
T TIGR01486 253 EH 254 (256)
T ss_pred HH
Confidence 64
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.6e-10 Score=107.04 Aligned_cols=107 Identities=19% Similarity=0.210 Sum_probs=86.3
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCH
Q psy11770 350 PEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSP 429 (668)
Q Consensus 350 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p 429 (668)
...|+.|+++|+++.++|+.+...+..+.+.+|+.. .|...
T Consensus 40 ~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-------------------------------------~f~~~-- 80 (169)
T TIGR02726 40 GMGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-------------------------------------FHEGI-- 80 (169)
T ss_pred HHHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-------------------------------------EEecC--
Confidence 368999999999999999999999999999999931 11111
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i 497 (668)
..|...++.++++ ++...+.+++|||+.||.+|++.|++++||+ |+.+.++.+|++++.+++-++.
T Consensus 81 kpkp~~~~~~~~~-l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 81 KKKTEPYAQMLEE-MNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred CCCHHHHHHHHHH-cCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 2334455555443 4777889999999999999999999999999 9999999999999876555443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.9e-10 Score=113.14 Aligned_cols=72 Identities=15% Similarity=0.171 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcc----hhcccCCchHHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD----IILTDDNFSSIVKAVMW 503 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad----~vl~~~~~~~i~~~l~~ 503 (668)
..|...++.++++ ++.....++++||+.||.+|++.+++||+|+ |+.+.+|+.|| ++..+++-+++.++|.+
T Consensus 158 ~~K~~al~~l~~~-~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYR-WGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHH-hCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3789999888765 5777778999999999999999999999999 99999999999 78888888999999864
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.5e-10 Score=108.22 Aligned_cols=124 Identities=19% Similarity=0.241 Sum_probs=96.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.|++.+.++.++++|.+++++||-...-+..+|+++|+...-.+.+..++..+.. .
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG---------------------~ 134 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG---------------------R 134 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec---------------------e
Confidence 5789999999999999999999999999999999999999965433333222211111 2
Q ss_pred EEE-ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcc
Q psy11770 423 VLA-RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 490 (668)
Q Consensus 423 v~~-r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~ 490 (668)
+.. .+..+.|...++.+.++ ++...+.+.++|||.||.|||+.||.++++. +.+..+..|+....
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~-~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAE-LGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eeeeecCcchHHHHHHHHHHH-cCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 232 34557899999887665 4677788999999999999999999999985 66667777776655
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.8e-10 Score=102.58 Aligned_cols=109 Identities=17% Similarity=0.285 Sum_probs=88.7
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhh
Q psy11770 352 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 431 (668)
Q Consensus 352 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~ 431 (668)
+|+.|++.|+++.++||++...+..+.+++|+.. .+.. ...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~-------------------------------------~~~~--~~~ 76 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH-------------------------------------LYQG--QSN 76 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE-------------------------------------EEec--ccc
Confidence 8999999999999999999999999999999831 1111 134
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH-HHHHH
Q psy11770 432 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS-IVKAV 501 (668)
Q Consensus 432 K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~-i~~~l 501 (668)
|...++.++++ ++...+.++++||+.||.+|++.|+++++|. ++.+..+..||+++..+.-++ +++++
T Consensus 77 k~~~~~~~~~~-~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 77 KLIAFSDILEK-LALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred hHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 56666666544 5777889999999999999999999999999 888999999999998765444 55554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-09 Score=105.87 Aligned_cols=130 Identities=11% Similarity=0.054 Sum_probs=95.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeeh-hhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEG-KEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.+.|+.+++.| ++.++||.....+..+++++|+..--.+-+.+++ ..+. . .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t-------------------G--~ 125 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV-------------------G--Y 125 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE-------------------C--e
Confidence 57999999999999975 9999999999999999999999422111111111 1000 0 0
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.. ..++.|...++.+. ..+..++++|||.||++|++.||+||++. +.+..+++||-.-.-.+.+.+...+.
T Consensus 126 ~~--~~~~~K~~~l~~l~-----~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~ 196 (203)
T TIGR02137 126 QL--RQKDPKRQSVIAFK-----SLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFL 196 (203)
T ss_pred ee--cCcchHHHHHHHHH-----hhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHH
Confidence 11 35678999998873 23457999999999999999999999996 66776666665444447888888876
Q ss_pred HH
Q psy11770 503 WG 504 (668)
Q Consensus 503 ~g 504 (668)
++
T Consensus 197 ~~ 198 (203)
T TIGR02137 197 KA 198 (203)
T ss_pred HH
Confidence 54
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-09 Score=96.79 Aligned_cols=120 Identities=20% Similarity=0.338 Sum_probs=99.5
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHh
Q psy11770 351 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 430 (668)
Q Consensus 351 ~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~ 430 (668)
..|+.|.+.||++.++|||+...+..-|+++|+. .+| .--.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~-------------------------------------~~~--qG~~ 82 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK-------------------------------------HLY--QGIS 82 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc-------------------------------------eee--echH
Confidence 5789999999999999999999999999999993 111 2345
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCC----chHHHHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN----FSSIVKAVMWGRN 506 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~----~~~i~~~l~~gR~ 506 (668)
+|....+.|+++ ++...+.|+++||..||.|+++..+.++|+. ++++..++.||+|+.... ++.+.++|..++.
T Consensus 83 dK~~a~~~L~~~-~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~ 160 (170)
T COG1778 83 DKLAAFEELLKK-LNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQG 160 (170)
T ss_pred hHHHHHHHHHHH-hCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccC
Confidence 888888888766 6889999999999999999999999999999 999999999999998554 4445556666666
Q ss_pred HHHHH
Q psy11770 507 VYDSI 511 (668)
Q Consensus 507 ~~~~i 511 (668)
.++-.
T Consensus 161 ~~d~~ 165 (170)
T COG1778 161 KLDEA 165 (170)
T ss_pred cHHHH
Confidence 55543
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.8e-09 Score=110.82 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHhhcCCCC-CEEEEEcCCccCHHHHhhCCccEeeCCCccHHHH----Hhc-chhc--ccCCchHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK----EAS-DIIL--TDDNFSSIVKAVM 502 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~-~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak----~~a-d~vl--~~~~~~~i~~~l~ 502 (668)
.|...++.+.+. ++... +.|+++||+.||++|++.|++|++|+ |+.+.+| .+| +.+. ..++-+++.+.|+
T Consensus 190 ~Kg~al~~l~~~-~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKEL-YRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHH-HhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 788888887654 67888 99999999999999999999999999 9999998 666 6777 5667889998885
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.5e-10 Score=109.03 Aligned_cols=133 Identities=20% Similarity=0.261 Sum_probs=98.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+..--++.+..++..+.. .+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~---------------------~~ 143 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTG---------------------LV 143 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEE---------------------Ee
Confidence 589999999999999999999999999999999999999843211111111100000 00
Q ss_pred EEe-cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHH
Q psy11770 424 LAR-SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKA 500 (668)
Q Consensus 424 ~~r-~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~ 500 (668)
... ..+..|..+++.+.++ ++...+.++++||+.+|++|++.||++++++ +.+.++++||+++.++++..+..+
T Consensus 144 ~~~~~~~~~k~~~~~~~~~~-~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 144 EGPIVDASYKGKTLLILLRK-EGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cCcccCCcccHHHHHHHHHH-cCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 111 1233477777766554 4667778999999999999999999999986 678888999999999888877654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.5e-09 Score=102.60 Aligned_cols=115 Identities=17% Similarity=0.290 Sum_probs=90.9
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHh
Q psy11770 351 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 430 (668)
Q Consensus 351 ~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~ 430 (668)
.+|+.|+++|+++.++||++...+..+++++|+.. +|. ..+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-------------------------------------~f~--g~~ 95 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-------------------------------------LYQ--GQS 95 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-------------------------------------eec--CCC
Confidence 68999999999999999999999999999999831 111 224
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCC----chHHHHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN----FSSIVKAVMWGRN 506 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~----~~~i~~~l~~gR~ 506 (668)
+|...++.++++ ++..++.|+++||+.||++|++.|+++++++ ++.+..+..||+++..+. ...+.+.+.+.|.
T Consensus 96 ~k~~~l~~~~~~-~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 96 NKLIAFSDLLEK-LAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred cHHHHHHHHHHH-hCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 566777776554 5777889999999999999999999999998 888888999999996443 3444545544443
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.89 E-value=1e-08 Score=103.76 Aligned_cols=159 Identities=12% Similarity=0.159 Sum_probs=106.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH---------------------
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR--------------------- 400 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~--------------------- 400 (668)
..+..|.+.+.+++++++|++++++|||+...+..+.+++++..+. -+++-+|..+..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3457799999999999999999999999999999999999975442 122222221100
Q ss_pred ----hhhc-------C--c-----------hhhh---HHHHhhhc----CCcEE-EE-----ecCH--hhHHHHHHHHHH
Q psy11770 401 ----RVRD-------N--N-----------GEVQ---QNLLDKVW----PRLRV-LA-----RSSP--SDKYTLVKGMID 441 (668)
Q Consensus 401 ----~~~~-------~--~-----------~~~~---~~~l~~~~----~~~~v-~~-----r~~p--~~K~~iv~~l~~ 441 (668)
.... . . .... ...+.+.. .++.+ .+ ...| ..|...++.+++
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~ 177 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQ 177 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHH
Confidence 0000 0 0 0000 01111111 11211 11 2233 479999988876
Q ss_pred hhcCCCCCEEEEEcCCccCHHHHhh-CCccEeeCCCccHHHHHhcc-------hhcccCCchHHHHHHHH
Q psy11770 442 SKISAGREVVAVTGDGTNDGPALKK-ADVGFAMGITGTDVAKEASD-------IILTDDNFSSIVKAVMW 503 (668)
Q Consensus 442 ~~~~~~~~~v~~iGDg~ND~~mlk~-A~vGIam~~~~~~~ak~~ad-------~vl~~~~~~~i~~~l~~ 503 (668)
. ++...+.|+++||+.||++|++. ++.||+|+ |+.+.+|+.++ ++.....-+|+.+.+.+
T Consensus 178 ~-~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 178 K-LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred H-cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 5 67788899999999999999998 67999999 99999887654 55666667888888764
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.1e-08 Score=104.06 Aligned_cols=157 Identities=13% Similarity=0.113 Sum_probs=100.8
Q ss_pred CCCCchHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHH------------Hhh--------
Q psy11770 344 PVRPEVPEAI-KKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN------------RRV-------- 402 (668)
Q Consensus 344 ~l~~~~~~~I-~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~------------~~~-------- 402 (668)
++.+....++ +++++.|+.++++|||.+..+..+.++.++..+. -.++.+|.++. ...
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~ 106 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREI 106 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCcEEEeCCCCccChhHHHHHhccCChhh
Confidence 3444455555 8899999999999999999999999999987653 12222332110 000
Q ss_pred -----hcC-------c-------------hhhh---HHHHhhhc----CCcEE------EEecCH--hhHHHHHHHHHHh
Q psy11770 403 -----RDN-------N-------------GEVQ---QNLLDKVW----PRLRV------LARSSP--SDKYTLVKGMIDS 442 (668)
Q Consensus 403 -----~~~-------~-------------~~~~---~~~l~~~~----~~~~v------~~r~~p--~~K~~iv~~l~~~ 442 (668)
... . .... ...+.+.. ..+.+ +....| ..|...++.++++
T Consensus 107 v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~ 186 (413)
T PLN02382 107 VVEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKK 186 (413)
T ss_pred HHHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHH
Confidence 000 0 0000 01111111 11121 123333 3699999988765
Q ss_pred hc---CCCCCEEEEEcCCccCHHHHhhCC-ccEeeCCCccHHHHHhcchhc---------ccCCchHHHHHHHH
Q psy11770 443 KI---SAGREVVAVTGDGTNDGPALKKAD-VGFAMGITGTDVAKEASDIIL---------TDDNFSSIVKAVMW 503 (668)
Q Consensus 443 ~~---~~~~~~v~~iGDg~ND~~mlk~A~-vGIam~~~~~~~ak~~ad~vl---------~~~~~~~i~~~l~~ 503 (668)
+ +...+.++++||+.||++||+.++ .||+|+ |+.+.+|+.++.+. .++.-+|+.++|.+
T Consensus 187 -~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 187 -LKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred -hhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 5 567789999999999999999999 799999 99999997643222 24457788888764
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.6e-08 Score=95.41 Aligned_cols=121 Identities=21% Similarity=0.295 Sum_probs=85.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+..--+..+..+..... . + ..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~----------~--------p--~~ 139 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI----------Q--------P--DG 139 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE----------e--------c--ce
Confidence 58999999999999999999999999999999999999974211111111100000 0 0 01
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad 486 (668)
+....|..|..+++.+.++ ++...+.++++||+.||++|++.||++++++ ......+.++|
T Consensus 140 ~~~~~~~~k~~~~~~~~~~-~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 140 IVRVTFDNKGEAVERLKRE-LNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred eeEEccccHHHHHHHHHHH-hCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 2224466787777776544 4666788999999999999999999999997 44444444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.9e-08 Score=99.21 Aligned_cols=97 Identities=32% Similarity=0.477 Sum_probs=75.1
Q ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhccC
Q psy11770 5 EVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVPE 84 (668)
Q Consensus 5 ~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~iP~ 84 (668)
+..+..+.+++++++.+++++..+.++.++++++++++++ .. ....+| ...+..++++++.+||+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~--------~~~~~~~i~~l~~~~P~ 198 (230)
T PF00122_consen 134 QLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWF---FN----DSGISF--------FKSFLFAISLLIVLIPC 198 (230)
T ss_dssp HHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCH---TG----STTCHC--------CHHHHHHHHHHHHHS-T
T ss_pred cccccccccchhhhhhhHHHHHHHHhcccccchhhhccce---ec----cccccc--------ccccccccceeeeeccc
Confidence 3444556677999999999999998877766665443221 10 123344 45778889999999999
Q ss_pred chHHHHHHHHHHHHHHHhhCCCcccCCchHHh
Q psy11770 85 GLPLAVTLSLAYSVKKMMKDNNLVRHLDACET 116 (668)
Q Consensus 85 ~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~ 116 (668)
+||+++++++..+.++|+++|+++|+++++|+
T Consensus 199 ~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 199 ALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp THHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 99999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.8e-07 Score=92.77 Aligned_cols=42 Identities=24% Similarity=0.218 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEee
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM 473 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam 473 (668)
+|...++.+.+. ++...+.|+++||+.||.+||+.|++|||+
T Consensus 179 ~Kg~al~~l~~~-lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 179 SKGKAANWLKAT-YNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CHHHHHHHHHHH-hCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 688888877665 688899999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.5e-07 Score=93.37 Aligned_cols=43 Identities=14% Similarity=0.155 Sum_probs=38.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 384 (668)
.+...+++.++|++|+++|++++++|||.+..+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3556678999999999999999999999999999999999973
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.1e-07 Score=89.94 Aligned_cols=126 Identities=17% Similarity=0.188 Sum_probs=88.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++ +++.++||.....+..+.+++|+...-...+..+++. .+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------------------------~i 122 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG------------------------MI 122 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC------------------------eE
Confidence 4689999999999999 9999999999999999999999842111111111110 01
Q ss_pred EE--ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcch-hcccCCchHHHHH
Q psy11770 424 LA--RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI-ILTDDNFSSIVKA 500 (668)
Q Consensus 424 ~~--r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~-vl~~~~~~~i~~~ 500 (668)
.. ...|+.|...++.+ +..+..++|+|||.||.+|.+.|++|+..+ ...+.....+++ ++. ++..+.+.
T Consensus 123 ~~~~~~~p~~k~~~l~~~-----~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~ 194 (205)
T PRK13582 123 TGYDLRQPDGKRQAVKAL-----KSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAA 194 (205)
T ss_pred ECccccccchHHHHHHHH-----HHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHH
Confidence 00 12467787777765 345678999999999999999999999887 443344455665 444 66766665
Q ss_pred HH
Q psy11770 501 VM 502 (668)
Q Consensus 501 l~ 502 (668)
+.
T Consensus 195 l~ 196 (205)
T PRK13582 195 ID 196 (205)
T ss_pred HH
Confidence 54
|
|
| >KOG1615|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.8e-07 Score=86.02 Aligned_cols=125 Identities=18% Similarity=0.258 Sum_probs=85.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ceEEe-ehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE--DYLIL-EGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~--~~i~~-~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
++.|++++.++.|++.|.++.++||--...+..+|.++||...+- +.+.. +..++... + .
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gf-------------d----~ 150 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGF-------------D----T 150 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccc-------------c----c
Confidence 478999999999999999999999999999999999999964221 11111 00010000 0 0
Q ss_pred cEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc-cHHHHHhcchhcc
Q psy11770 421 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG-TDVAKEASDIILT 490 (668)
Q Consensus 421 ~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~-~~~ak~~ad~vl~ 490 (668)
..-. .....|.++++.+++ +.+.+.++|+|||.||.+|...|+.=++.|++- .+..|..++..+.
T Consensus 151 ~~pt--sdsggKa~~i~~lrk---~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~ 216 (227)
T KOG1615|consen 151 NEPT--SDSGGKAEVIALLRK---NYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVT 216 (227)
T ss_pred CCcc--ccCCccHHHHHHHHh---CCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHHHHH
Confidence 0001 122378999987764 567789999999999999999998877766433 2334555554433
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.5e-07 Score=91.71 Aligned_cols=151 Identities=11% Similarity=0.244 Sum_probs=95.0
Q ss_pred CCCCchHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCC--ccCCCceEEe-ehh------------hHH----Hhhh
Q psy11770 344 PVRPEVPEAIKKCQR-AGITIRMVTGDNINTARSIATKCGI--VKPGEDYLIL-EGK------------EFN----RRVR 403 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~-aGI~v~~~TGd~~~ta~~ia~~~gi--~~~~~~~i~~-~g~------------~~~----~~~~ 403 (668)
.+.+++.++|+.|++ .|++++++|||+...+..+.+.+++ ...++..+.- ++. .+. +...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 567899999999998 7999999999999999988877663 2223222211 110 000 0000
Q ss_pred c--------Cc---------hhhhHH-------HHhhhcCCcEE-----EEecCH--hhHHHHHHHHHHhhcCCCCCEEE
Q psy11770 404 D--------NN---------GEVQQN-------LLDKVWPRLRV-----LARSSP--SDKYTLVKGMIDSKISAGREVVA 452 (668)
Q Consensus 404 ~--------~~---------~~~~~~-------~l~~~~~~~~v-----~~r~~p--~~K~~iv~~l~~~~~~~~~~~v~ 452 (668)
. .. .....+ .+.+......+ +....| .+|...++.+++. ++...+.++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~-~~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE-APFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh-cCCCCCeEE
Confidence 0 00 000011 11111111111 122233 4899999998765 566678899
Q ss_pred EEcCCccCHHHHhhC----CccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 453 VTGDGTNDGPALKKA----DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 453 ~iGDg~ND~~mlk~A----~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
++||+.||.+|++.+ +.||+|| ++. ..|++.+. +-..+..+|.
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHHH
Confidence 999999999999999 9999999 765 34677776 5666665553
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.7e-06 Score=85.37 Aligned_cols=42 Identities=7% Similarity=0.029 Sum_probs=38.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 384 (668)
+...+.+.++|++|+++||.++++||+.......+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 456788999999999999999999999999999999999984
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.1e-06 Score=83.89 Aligned_cols=111 Identities=17% Similarity=0.161 Sum_probs=80.6
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEe-ehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL-EGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~-~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
..++.+++.+.++.+++.|++++++||.....+..+++.+|+..--+.-+.. ++..+..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g-------------------- 144 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTG-------------------- 144 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeC--------------------
Confidence 3568999999999999999999999999999999999999984210110111 0000000
Q ss_pred cEEE-EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 421 LRVL-ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 421 ~~v~-~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
.+. ..+.++.|...++.+.++ .+...+.+.++||+.+|.+|++.|+.++++.
T Consensus 145 -~~~~~~~~g~~K~~~l~~~~~~-~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 145 -NIDGNNCKGEGKVHALAELLAE-EQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -CccCCCCCChHHHHHHHHHHHH-cCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 000 123567888888877654 3556678999999999999999999999876
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.9e-06 Score=85.59 Aligned_cols=54 Identities=20% Similarity=0.291 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcC----CccCHHHHhhC-CccEeeCCCccHHHHHhcchhc
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKA-DVGFAMGITGTDVAKEASDIIL 489 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGD----g~ND~~mlk~A-~vGIam~~~~~~~ak~~ad~vl 489 (668)
.+|...++.|.++ .+.|+++|| |.||.+||+.| -.|++++ |+.+.+|..+.++.
T Consensus 187 vsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4799999988643 578999999 99999999976 5677777 99999998877654
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.31 E-value=5e-06 Score=82.60 Aligned_cols=128 Identities=20% Similarity=0.315 Sum_probs=84.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--CceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG--EDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~--~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+...+ .+.+..+...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------------ 139 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------------ 139 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------------
Confidence 47899999999999999999999999999999999999984210 0001111000
Q ss_pred EEEEe------cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhh--CCccEeeCCCc-cHHHHHhcchhcccC
Q psy11770 422 RVLAR------SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK--ADVGFAMGITG-TDVAKEASDIILTDD 492 (668)
Q Consensus 422 ~v~~r------~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~--A~vGIam~~~~-~~~ak~~ad~vl~~~ 492 (668)
.+.+. +....|...++.+.++ ++ .+.++++||+.||+.|.+. ++++++.|... .+.....+|+++.
T Consensus 140 ~~~g~~~~~~~~~~~~K~~~i~~~~~~-~~--~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-- 214 (224)
T PLN02954 140 EYAGFDENEPTSRSGGKAEAVQHIKKK-HG--YKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT-- 214 (224)
T ss_pred cEECccCCCcccCCccHHHHHHHHHHH-cC--CCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--
Confidence 00000 1223577777776543 22 3579999999999999888 45555555222 2334456888876
Q ss_pred CchHHHHH
Q psy11770 493 NFSSIVKA 500 (668)
Q Consensus 493 ~~~~i~~~ 500 (668)
++..+.++
T Consensus 215 ~~~el~~~ 222 (224)
T PLN02954 215 DFQDLIEV 222 (224)
T ss_pred CHHHHHHh
Confidence 56665543
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.29 E-value=5e-06 Score=82.03 Aligned_cols=137 Identities=15% Similarity=0.093 Sum_probs=84.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-CceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG-EDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~-~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....- .+-...+++.+.... ..+..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~--------------p~~~~ 134 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW--------------PHPCD 134 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC--------------CCCCc
Confidence 368999999999999999999999999999999998887542110 000112222111000 00000
Q ss_pred EEEE-ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHH--HhcchhcccCCchHHH
Q psy11770 422 RVLA-RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK--EASDIILTDDNFSSIV 498 (668)
Q Consensus 422 ~v~~-r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak--~~ad~vl~~~~~~~i~ 498 (668)
.-+. .+ ...|..+++.+ +..++.++|+|||.||.+|++.||++++-+ .-.+..+ ..+.... ++|..+.
T Consensus 135 ~~~~~~c-g~~K~~~l~~~-----~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~ 205 (214)
T TIGR03333 135 GTCQNQC-GCCKPSLIRKL-----SEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVR 205 (214)
T ss_pred cccccCC-CCCHHHHHHHH-----hhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHH
Confidence 0000 11 34688888876 335677899999999999999999988743 2112111 1122222 3677777
Q ss_pred HHHH
Q psy11770 499 KAVM 502 (668)
Q Consensus 499 ~~l~ 502 (668)
+.|.
T Consensus 206 ~~l~ 209 (214)
T TIGR03333 206 KELE 209 (214)
T ss_pred HHHH
Confidence 7664
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.7e-05 Score=83.57 Aligned_cols=98 Identities=16% Similarity=0.265 Sum_probs=73.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++|++.+.+++++++|++++++|+.+...+..+++++|+. +.++..++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF---d~Vigsd~---------------------------- 120 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF---DGVFASDG---------------------------- 120 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---CEEEeCCC----------------------------
Confidence 47899999999999999999999999999999999999982 11211111
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD 479 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~ 479 (668)
..++.|+.|.+.++.. ++. +.+.++||+.+|.+|++.|+-+++++ .+..
T Consensus 121 ~~~~kg~~K~~~l~~~----l~~--~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 121 TTNLKGAAKAAALVEA----FGE--RGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred ccccCCchHHHHHHHH----hCc--cCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 0134666776655532 232 33578899999999999999999997 4433
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.7e-06 Score=92.79 Aligned_cols=39 Identities=8% Similarity=0.175 Sum_probs=36.5
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGI 383 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 383 (668)
..+.+.++|+.|+++|++++++|||....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 556889999999999999999999999999999999996
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.1e-06 Score=82.28 Aligned_cols=128 Identities=20% Similarity=0.300 Sum_probs=92.1
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
...+-|++++++..|+++|++..++|+++...+..+.+..|+...-..++. +...
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g--~~~~----------------------- 141 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG--GDDV----------------------- 141 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc--CCCC-----------------------
Confidence 456889999999999999999999999999999999999999533221111 1100
Q ss_pred EEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC---ccEeeCCC-ccHHHHHhcchhcccCCchHH
Q psy11770 422 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD---VGFAMGIT-GTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 422 ~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~---vGIam~~~-~~~~ak~~ad~vl~~~~~~~i 497 (668)
...+..|.....+.+. ++..++.++||||..+|+.|-+.|+ +||..|.+ ........+|+++. ++..+
T Consensus 142 -~~~KP~P~~l~~~~~~-----~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el 213 (220)
T COG0546 142 -PPPKPDPEPLLLLLEK-----LGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAEL 213 (220)
T ss_pred -CCCCcCHHHHHHHHHH-----hCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHH
Confidence 0112345555555554 3555568999999999999999999 77887743 34455566888887 67776
Q ss_pred HHHHH
Q psy11770 498 VKAVM 502 (668)
Q Consensus 498 ~~~l~ 502 (668)
...+.
T Consensus 214 ~~~l~ 218 (220)
T COG0546 214 LALLA 218 (220)
T ss_pred HHHHh
Confidence 66553
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.5e-06 Score=82.36 Aligned_cols=96 Identities=26% Similarity=0.339 Sum_probs=69.9
Q ss_pred CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEe
Q psy11770 347 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426 (668)
Q Consensus 347 ~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r 426 (668)
+++.+.|+.++++|++++++||.....+.++++.+|+... .++..+- ... .......+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~--~v~~~~~--~~~------------------~~~~~~~~ 149 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD--NVIGNEL--FDN------------------GGGIFTGR 149 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG--GEEEEEE--ECT------------------TCCEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce--EEEEEee--eec------------------ccceeeee
Confidence 7888999999999999999999999999999999999521 1111111 000 01133445
Q ss_pred cCHh---hHHHHHHHHH--HhhcCCCCCEEEEEcCCccCHHHHh
Q psy11770 427 SSPS---DKYTLVKGMI--DSKISAGREVVAVTGDGTNDGPALK 465 (668)
Q Consensus 427 ~~p~---~K~~iv~~l~--~~~~~~~~~~v~~iGDg~ND~~mlk 465 (668)
.++. .|...++.++ ... +.....++++|||.||++|||
T Consensus 150 ~~~~~~~~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 150 ITGSNCGGKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEEESHHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred ECCCCCCcHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 4444 4999999872 221 457889999999999999996
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.6e-06 Score=80.96 Aligned_cols=129 Identities=19% Similarity=0.370 Sum_probs=83.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC--CccCCCceEEeehhhH--------HHhh---hcC-----
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCG--IVKPGEDYLILEGKEF--------NRRV---RDN----- 405 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g--i~~~~~~~i~~~g~~~--------~~~~---~~~----- 405 (668)
++.+.+.++|++|++.|++++++|||....+..+.+.++ ++..++..+...++.. .... ...
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 578999999999999999999999999999999988744 3334444333221110 0000 000
Q ss_pred --------------c--------hh----h-hHH---HHhhhc---CCcEEEE------ecCH--hhHHHHHHHHHHhhc
Q psy11770 406 --------------N--------GE----V-QQN---LLDKVW---PRLRVLA------RSSP--SDKYTLVKGMIDSKI 444 (668)
Q Consensus 406 --------------~--------~~----~-~~~---~l~~~~---~~~~v~~------r~~p--~~K~~iv~~l~~~~~ 444 (668)
. .. . ... .+.... ..+.+.. ...| .+|...++.++++ +
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~-~ 175 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE-L 175 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH-h
Confidence 0 00 0 000 011111 1122221 2233 5899999998765 5
Q ss_pred CCCCCEEEEEcCCccCHHHHhhCCccEee
Q psy11770 445 SAGREVVAVTGDGTNDGPALKKADVGFAM 473 (668)
Q Consensus 445 ~~~~~~v~~iGDg~ND~~mlk~A~vGIam 473 (668)
+.....++++||+.||.+|++.+++||||
T Consensus 176 ~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 176 NGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 66778899999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.5e-06 Score=81.30 Aligned_cols=103 Identities=22% Similarity=0.244 Sum_probs=73.1
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehh-hHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK-EFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~-~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++++.+.++.+++.|++++++||.....+..+++.+|+..--.+.+..+.+ .+... ...+
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~---------------~~~~--- 135 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGP---------------IEGQ--- 135 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCc---------------cCCc---
Confidence 5799999999999999999999999999999999999984211111111100 00000 0000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 467 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A 467 (668)
..+.+..|...++.+.+. ++...+.++++|||.||.+|++.|
T Consensus 136 -~~~~~~~K~~~l~~~~~~-~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 -VNPEGECKGKVLKELLEE-SKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -ccCCcchHHHHHHHHHHH-hCCCHHHEEEEeCCHHHHHHHhcC
Confidence 124567899999887654 345667899999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=9.9e-06 Score=80.49 Aligned_cols=128 Identities=19% Similarity=0.295 Sum_probs=88.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.|++.+.++.|++.|+++.++||.....+..+.+.+|+...-.. ++.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~------------------------- 144 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VIGGDS------------------------- 144 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EEcCCC-------------------------
Confidence 35789999999999999999999999999999999999998432111 111100
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc-cEee--CCC-ccHHHHHhcchhcccCCchHHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAM--GIT-GTDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v-GIam--~~~-~~~~ak~~ad~vl~~~~~~~i~ 498 (668)
+.+..| +..+++.+.++ ++.+.+.++++||+.||+.+.+.||+ +|.+ |.. ..+.....+++++. ++..+.
T Consensus 145 -~~~~kp--~~~~~~~~~~~-~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~ 218 (226)
T PRK13222 145 -LPNKKP--DPAPLLLACEK-LGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELL 218 (226)
T ss_pred -CCCCCc--ChHHHHHHHHH-cCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHH
Confidence 011122 22334433333 47778899999999999999999997 4444 311 22334456788775 788888
Q ss_pred HHHHH
Q psy11770 499 KAVMW 503 (668)
Q Consensus 499 ~~l~~ 503 (668)
..+.+
T Consensus 219 ~~l~~ 223 (226)
T PRK13222 219 PLLGL 223 (226)
T ss_pred HHHHH
Confidence 77754
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.1e-05 Score=79.87 Aligned_cols=104 Identities=23% Similarity=0.264 Sum_probs=71.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEE----eehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLI----LEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~----~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
+++|++.+.++.|++.|+++.++||.....+..+.+++ +.. ..++. .+|+.+... .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~~----------------kp 134 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITIT----------------WP 134 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEEe----------------cc
Confidence 57999999999999999999999999999999999988 632 22221 112111000 00
Q ss_pred CcEE--E-EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 420 RLRV--L-ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 420 ~~~v--~-~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
.-.. + .++ ...|..+++.+ +..+..++++|||.||++|.+.||+.++
T Consensus 135 ~p~~~~~~~~~-~~~K~~~l~~~-----~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 135 HPCDEHCQNHC-GCCKPSLIRKL-----SDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CCccccccccC-CCchHHHHHHh-----ccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 0000 0 001 12477777764 5566789999999999999999999776
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.5e-05 Score=78.11 Aligned_cols=125 Identities=20% Similarity=0.308 Sum_probs=84.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|+++|+++.++||.....+....+.+|+...-+.++ ...+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~--~~~~-------------------------- 126 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVI--GSDE-------------------------- 126 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEE--ecCc--------------------------
Confidence 678999999999999999999999999999999999999842111110 0000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE---eeCC-CccHHHHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF---AMGI-TGTDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI---am~~-~~~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
.....| +..+++...++ ++..++.+++|||+.+|+.+-+.+|+.. .-|. +..+..+..+|+++. ++..+..
T Consensus 127 ~~~~KP--~~~~~~~~~~~-~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~ 201 (205)
T TIGR01454 127 VPRPKP--APDIVREALRL-LDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLA 201 (205)
T ss_pred CCCCCC--ChHHHHHHHHH-cCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHH
Confidence 001122 23334433332 4777889999999999999999999753 3331 222335567888876 6666655
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
++
T Consensus 202 ~~ 203 (205)
T TIGR01454 202 LC 203 (205)
T ss_pred Hh
Confidence 44
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.6e-05 Score=71.55 Aligned_cols=117 Identities=19% Similarity=0.185 Sum_probs=75.9
Q ss_pred eecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 340 GIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 340 ~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
.-..++.+++.+.++.|++.|++++++||+....+....+++|+......++..++...... .... ....
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~--------~~~~ 89 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYP--KEGL--------FLGG 89 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcc--cccc--------cccc
Confidence 34458899999999999999999999999999999999999998433232222222111100 0000 0001
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC-CccE
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA-DVGF 471 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A-~vGI 471 (668)
....+.+..++.+..+.+. ++...+.++++||+.+|+.|++.+ .-+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 90 GPFDIGKPNPDKLLAALKL-----LGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred cccccCCCCHHHHHHHHHH-----cCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 1122334455555555544 355678899999999999999984 4444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.9e-06 Score=81.89 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH-----HHHhcc----hhcccCCchHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV-----AKEASD----IILTDDNFSSIVKA 500 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~-----ak~~ad----~vl~~~~~~~i~~~ 500 (668)
..|...++.++.+ ++.+.+.|+++||+.||.+||..++.||.++ |+.+. .....+ |....+.-.||.+.
T Consensus 164 a~K~~Al~~L~~~-~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIleg 241 (247)
T PF05116_consen 164 ASKGAALRYLMER-WGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEG 241 (247)
T ss_dssp -SHHHHHHHHHHH-HT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHH
T ss_pred CCHHHHHHHHHHH-hCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHH
Confidence 5799999998776 6777788899999999999999999999999 88887 222221 33344455667776
Q ss_pred HHH
Q psy11770 501 VMW 503 (668)
Q Consensus 501 l~~ 503 (668)
+.|
T Consensus 242 l~~ 244 (247)
T PF05116_consen 242 LQH 244 (247)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.9e-05 Score=92.09 Aligned_cols=149 Identities=15% Similarity=0.251 Sum_probs=93.2
Q ss_pred CCCCchHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcC--CccCCCceEEeehhhHHH--------------hhhc--
Q psy11770 344 PVRPEVPEAIKKCQR-AGITIRMVTGDNINTARSIATKCG--IVKPGEDYLILEGKEFNR--------------RVRD-- 404 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~-aGI~v~~~TGd~~~ta~~ia~~~g--i~~~~~~~i~~~g~~~~~--------------~~~~-- 404 (668)
.+.+++.++|++|.+ .|+.|+++|||............+ ++..++..+...+..+.. .+..
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 367899999999999 699999999999998888766555 333444433222211100 0000
Q ss_pred ----------C-----------chhhh-------HHHHhhhcC--CcEEE-------EecCHhhHHHHHHHHHHhhcCCC
Q psy11770 405 ----------N-----------NGEVQ-------QNLLDKVWP--RLRVL-------ARSSPSDKYTLVKGMIDSKISAG 447 (668)
Q Consensus 405 ----------~-----------~~~~~-------~~~l~~~~~--~~~v~-------~r~~p~~K~~iv~~l~~~~~~~~ 447 (668)
. +.... ...+..... .+.+. .+....+|...++.+++ +..
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~---~~~ 670 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE---AGP 670 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh---cCC
Confidence 0 00000 011111111 11111 12233589999999876 346
Q ss_pred CCEEEEEcCCccCHHHHhhC---CccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 448 REVVAVTGDGTNDGPALKKA---DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 448 ~~~v~~iGDg~ND~~mlk~A---~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.+.++++||+.||.+|++.+ +++|+|| ++ +.+|++.+.++ +.+.++|.
T Consensus 671 ~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 671 YDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 67899999999999999996 6899998 64 56788988843 55666654
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.98 E-value=2e-05 Score=75.74 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=74.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+...-+.+ +.+..... .++ .+.-...++.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i--~~~~~~~~----~~g-----~~~~~~~~~~ 139 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEI--YSNPASFD----NDG-----RHIVWPHHCH 139 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEE--eccCceEC----CCC-----cEEEecCCCC
Confidence 368999999999999999999999999999999999999984221111 11110000 000 0000000001
Q ss_pred EEEe-cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLAR-SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r-~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
.+.. .....|..+++.++.. . ++.++++|||.||+.|.+.||+-.|
T Consensus 140 ~~~~~~~g~~K~~~~~~~~~~---~-~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 140 GCCSCPCGCCKGKVIHKLSEP---K-YQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred ccCcCCCCCCHHHHHHHHHhh---c-CceEEEECCCcchhchHhcCCcccc
Confidence 1111 1223588888887532 1 6789999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.9e-05 Score=79.44 Aligned_cols=125 Identities=15% Similarity=0.209 Sum_probs=84.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.|++.+.|+.|+++|+++.++||.+...+..+..+.|+...-+. +
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~--i------------------------------ 147 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRW--I------------------------------ 147 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeE--E------------------------------
Confidence 36789999999999999999999999999988888888888321111 0
Q ss_pred EEEecCH--hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc---EeeCCCccH-HHHHhcchhcccCCchH
Q psy11770 423 VLARSSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG---FAMGITGTD-VAKEASDIILTDDNFSS 496 (668)
Q Consensus 423 v~~r~~p--~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG---Iam~~~~~~-~ak~~ad~vl~~~~~~~ 496 (668)
+.+...+ ..+..+++.+.++ ++..++.+++|||+.||+.+.+.||+. |..|.+..+ .....+|+++. ++..
T Consensus 148 ~~~d~~~~~Kp~p~~~~~~~~~-~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~e 224 (272)
T PRK13223 148 IGGDTLPQKKPDPAALLFVMKM-AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRA 224 (272)
T ss_pred EecCCCCCCCCCcHHHHHHHHH-hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHH
Confidence 1111111 1123344444333 467788999999999999999999963 333322222 23457888886 6777
Q ss_pred HHHHHH
Q psy11770 497 IVKAVM 502 (668)
Q Consensus 497 i~~~l~ 502 (668)
+.+++.
T Consensus 225 l~~~~~ 230 (272)
T PRK13223 225 LLPGCA 230 (272)
T ss_pred HHHHHh
Confidence 765543
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.6e-05 Score=77.19 Aligned_cols=122 Identities=13% Similarity=0.184 Sum_probs=83.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+...-+. ++.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~--vi~----------------------------- 190 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSV--VQA----------------------------- 190 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEE--EEe-----------------------------
Confidence 5789999999999999999999999999999999999998422110 111
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE---eeCCCccHH-HHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF---AMGITGTDV-AKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI---am~~~~~~~-ak~~ad~vl~~~~~~~i~~ 499 (668)
+...+ .|......++++ ++..++.+++|||+.+|+.+-+.||+-. .-|.+..+. ....+|+++. ++..+.+
T Consensus 191 -~~~~~-~k~~~~~~~l~~-~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~ 265 (273)
T PRK13225 191 -GTPIL-SKRRALSQLVAR-EGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQ 265 (273)
T ss_pred -cCCCC-CCHHHHHHHHHH-hCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHH
Confidence 11111 123344444332 4667788999999999999999999653 333222222 2345888876 6777766
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
++
T Consensus 266 ~~ 267 (273)
T PRK13225 266 AV 267 (273)
T ss_pred HH
Confidence 55
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.3e-05 Score=76.62 Aligned_cols=123 Identities=15% Similarity=0.198 Sum_probs=81.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
-++.|++.++++.|++.|+++.++||........+.+++|+..--+.+ +.+.+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~------------------------ 144 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDAL--ASAEKL------------------------ 144 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEE--EEcccC------------------------
Confidence 357899999999999999999999999999999999999984322111 111100
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc---cHHHHHhcchhcccCCchHHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG---TDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~---~~~ak~~ad~vl~~~~~~~i~ 498 (668)
....| +..+.+.+.+. ++...+.++++||+.||+.+-+.||+....-..+ .+.-...+|+++. ++..+.
T Consensus 145 --~~~Kp--~~~~~~~~~~~-~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 145 --PYSKP--HPEVYLNCAAK-LGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred --CCCCC--CHHHHHHHHHH-cCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 01122 22344444333 5777889999999999999999999765432122 1122345677765 565553
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.92 E-value=4.2e-05 Score=75.23 Aligned_cols=122 Identities=18% Similarity=0.243 Sum_probs=81.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+.....+..+.++.|+...-+. + +.+.+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~-~-~~~~~-------------------------- 136 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSV-L-IGGDS-------------------------- 136 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcE-E-EecCC--------------------------
Confidence 5789999999999999999999999999999999999998422111 1 11000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe-e--CCCc-cHHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-M--GITG-TDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa-m--~~~~-~~~ak~~ad~vl~~~~~~~i~ 498 (668)
..+..| +.+++..+.++ ++...+.+++|||+.+|+.+.+.||+... + |... .+.....+|+++. ++..+.
T Consensus 137 ~~~~Kp--~p~~~~~~~~~-~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~ 210 (213)
T TIGR01449 137 LAQRKP--HPDPLLLAAER-LGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELP 210 (213)
T ss_pred CCCCCC--ChHHHHHHHHH-cCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHH
Confidence 001122 22334433333 47778889999999999999999996654 2 3111 1223346787776 555544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=8.1e-05 Score=73.37 Aligned_cols=125 Identities=20% Similarity=0.211 Sum_probs=82.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+...-+.+ +.+.+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i--~~~~~-------------------------- 133 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVV--ITLDD-------------------------- 133 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEE--EecCc--------------------------
Confidence 37899999999999999999999999999999999999984221111 11000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc---EeeCCCccHH-HHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG---FAMGITGTDV-AKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG---Iam~~~~~~~-ak~~ad~vl~~~~~~~i~~ 499 (668)
..+..| |.+.++.+.++ ++...+.+++|||+.+|+.+-+.||+- +.-|....+. ....+|+++. ++..+.+
T Consensus 134 ~~~~Kp--~p~~~~~~~~~-~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~ 208 (214)
T PRK13288 134 VEHAKP--DPEPVLKALEL-LGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLA 208 (214)
T ss_pred CCCCCC--CcHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHH
Confidence 011112 22233333322 466778999999999999999999974 4334112222 2345787766 6777766
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
++
T Consensus 209 ~i 210 (214)
T PRK13288 209 IV 210 (214)
T ss_pred HH
Confidence 54
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00013 Score=71.49 Aligned_cols=107 Identities=14% Similarity=0.216 Sum_probs=76.7
Q ss_pred CCCCchHHHHH-HHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIK-KCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~-~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.+.|++.+.|+ .++++|++++++|+-....+..+++..++... .+++.. +++.. + .+ + .
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t---~le~~--~-gg------------~-~ 153 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIAS---QIERG--N-GG------------W-V 153 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEE---EeEEe--C-Cc------------e-E
Confidence 46899999996 78889999999999999999999999766431 222211 11100 0 00 0 0
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
.=..|..++|.+-++... ........+-||+.||.|||+.||.++++.
T Consensus 154 ~g~~c~g~~Kv~rl~~~~----~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 154 LPLRCLGHEKVAQLEQKI----GSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred cCccCCChHHHHHHHHHh----CCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 112367789998888763 334456678899999999999999999986
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00013 Score=72.72 Aligned_cols=125 Identities=16% Similarity=0.149 Sum_probs=82.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.+...+..+.++.|+...-+ . ++.+.+. -
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~-~-i~~~~~~------------------------~ 148 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA-V-LIGGDTL------------------------A 148 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc-E-EEecCcC------------------------C
Confidence 478999999999999999999999999988888888888842111 1 1111100 0
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE---eeCCC-cc-HHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF---AMGIT-GT-DVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI---am~~~-~~-~~ak~~ad~vl~~~~~~~i~ 498 (668)
..+..|+ ++..+.++ ++..++.+++|||+.+|+.+-+.||+.. .-|.. .. ......+|+++. ++..+.
T Consensus 149 ~~KP~p~----~~~~~~~~-l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~ 221 (229)
T PRK13226 149 ERKPHPL----PLLVAAER-IGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLW 221 (229)
T ss_pred CCCCCHH----HHHHHHHH-hCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHH
Confidence 0122332 33333222 4778899999999999999999999654 23311 11 122345888886 666666
Q ss_pred HHH
Q psy11770 499 KAV 501 (668)
Q Consensus 499 ~~l 501 (668)
+.+
T Consensus 222 ~~~ 224 (229)
T PRK13226 222 NPA 224 (229)
T ss_pred HHh
Confidence 554
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00025 Score=69.70 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=77.3
Q ss_pred CCCCchHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAI-KKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I-~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.+.|++.+.| +.+++.|++++++|+.....+..+++.+|+.. ...++..+ +.... .-.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~---l~~~~-----------------tg~ 153 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQ---MQRRY-----------------GGW 153 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEE---EEEEE-----------------ccE
Confidence 4589999999 57888999999999999999999999999621 22333221 11000 001
Q ss_pred EE-EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 423 VL-ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 423 v~-~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
+. ..|..++|..-++... +.......+-||+.||.|||+.|+.+++++
T Consensus 154 ~~g~~c~g~~K~~~l~~~~----~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 154 VLTLRCLGHEKVAQLERKI----GTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred ECCccCCChHHHHHHHHHh----CCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 11 2367789998888763 345566678899999999999999999986
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00022 Score=72.22 Aligned_cols=96 Identities=19% Similarity=0.167 Sum_probs=66.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++||.....+..+.+++|+..-..+.+ +.+.+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~i-i~~~~~~------------------------ 153 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYN-VTTDDVP------------------------ 153 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceE-EccccCC------------------------
Confidence 468999999999999999999999999999999999999853211111 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCC-CCEEEEEcCCccCHHHHhhCCc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADV 469 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~-~~~v~~iGDg~ND~~mlk~A~v 469 (668)
..+..|+-=....+. ++.. .+.+++|||+.+|+.+-+.||+
T Consensus 154 ~~KP~p~~~~~a~~~-----l~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 154 AGRPAPWMALKNAIE-----LGVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred CCCCCHHHHHHHHHH-----cCCCCchheEEECCcHHHHHHHHHCCC
Confidence 112233322222222 4553 7789999999999999999994
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00055 Score=69.11 Aligned_cols=140 Identities=14% Similarity=0.164 Sum_probs=83.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++||+.+.++.|++.|+++.++||-....+..+.+++|+..++..+ +-|--.+.. ++.... ...
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~I-vSN~L~f~~-----dGvltG-----~~~---- 185 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKV-VSNFMDFDE-----DGVLKG-----FKG---- 185 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceE-EeeeEEECC-----CCeEeC-----CCC----
Confidence 57999999999999999999999999999999999999986443222 111000000 000000 000
Q ss_pred EEecCHhhHHHHHHHHHHhhcC--CCCCEEEEEcCCccCHHHHhhC---CccEeeCC-Cc-----cHHHHHhcchhcccC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKIS--AGREVVAVTGDGTNDGPALKKA---DVGFAMGI-TG-----TDVAKEASDIILTDD 492 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~--~~~~~v~~iGDg~ND~~mlk~A---~vGIam~~-~~-----~~~ak~~ad~vl~~~ 492 (668)
--+....|.+.+....+..++ .....|+++|||.||++|..-. ..-+.+|- |. -+.-+++-|+|+.+|
T Consensus 186 -P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D 264 (277)
T TIGR01544 186 -PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQD 264 (277)
T ss_pred -CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECC
Confidence 001123566655432222234 5677899999999999996654 11222221 22 233567889999866
Q ss_pred CchHHHH
Q psy11770 493 NFSSIVK 499 (668)
Q Consensus 493 ~~~~i~~ 499 (668)
.=-.+..
T Consensus 265 ~t~~v~~ 271 (277)
T TIGR01544 265 ETLEVAN 271 (277)
T ss_pred CCchHHH
Confidence 5333333
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00033 Score=69.33 Aligned_cols=124 Identities=22% Similarity=0.281 Sum_probs=81.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc--cCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV--KPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~--~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
.++.+|+.+.++.|+++|+++.++||.....+..+.+.+|+. ..-+ .+.. +.+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~-~~~~---------------------- 141 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVC-PSDV---------------------- 141 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEc-CCcC----------------------
Confidence 368999999999999999999999999999999999999984 2111 1111 1100
Q ss_pred cEEEEecCHhhHHHHHHHHHHhhcCCC-CCEEEEEcCCccCHHHHhhCCccEe--eCCCcc---HHH-HHhcchhcccCC
Q psy11770 421 LRVLARSSPSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADVGFA--MGITGT---DVA-KEASDIILTDDN 493 (668)
Q Consensus 421 ~~v~~r~~p~~K~~iv~~l~~~~~~~~-~~~v~~iGDg~ND~~mlk~A~vGIa--m~~~~~---~~a-k~~ad~vl~~~~ 493 (668)
.+..| +..+.....++ ++.. ++.+++|||+.+|+.+-+.||+..+ +. .+. +.. ...+|+++. +
T Consensus 142 ----~~~KP--~p~~~~~a~~~-~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~--~ 211 (220)
T TIGR03351 142 ----AAGRP--APDLILRAMEL-TGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLD--S 211 (220)
T ss_pred ----CCCCC--CHHHHHHHHHH-cCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeec--C
Confidence 01122 22333333332 4555 5789999999999999999999862 32 221 122 234666665 5
Q ss_pred chHHHHH
Q psy11770 494 FSSIVKA 500 (668)
Q Consensus 494 ~~~i~~~ 500 (668)
+..+..+
T Consensus 212 ~~~l~~~ 218 (220)
T TIGR03351 212 VADLPAL 218 (220)
T ss_pred HHHHHHh
Confidence 5555443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00052 Score=63.87 Aligned_cols=112 Identities=19% Similarity=0.187 Sum_probs=73.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc---CCccCCCceEEeehhhHHHhhhcCchhhhHHHHh
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTAR---SIATKC---GIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLD 415 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~---~ia~~~---gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~ 415 (668)
+|.+.+++.+++++++++|++++++|||+...+. ....++ |..-+.+.++..+|..+....
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~------------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALH------------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhh-------------
Confidence 5788999999999999999999999999988874 555552 321122334444443332110
Q ss_pred hhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 416 KVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 416 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
+ .+..+-.-+.|...++.+++...+.....++.+||+.+|+.+-+++++.-
T Consensus 92 ----~-e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 92 ----R-EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred ----c-ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 0 12222222348888887765322234567788999999999999988653
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00054 Score=70.05 Aligned_cols=101 Identities=15% Similarity=0.092 Sum_probs=67.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.|+.|+++|+++.++||.....+..+.+..|+.....+.+ +.+.+..
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i-~~~~~~~------------------------ 155 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHV-VTTDDVP------------------------ 155 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEE-EcCCcCC------------------------
Confidence 468999999999999999999999999998888888877642211111 1111000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCC-CCEEEEEcCCccCHHHHhhCCc---cEeeC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADV---GFAMG 474 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~-~~~v~~iGDg~ND~~mlk~A~v---GIam~ 474 (668)
..+..|+ +.....++ ++.. .+.+++|||+.+|+.+-+.||+ ||.-|
T Consensus 156 ~~KP~p~----~~~~a~~~-l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 156 AGRPYPW----MALKNAIE-LGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred CCCCChH----HHHHHHHH-cCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 0112222 22222222 4554 5789999999999999999995 55544
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00037 Score=70.41 Aligned_cols=115 Identities=12% Similarity=0.106 Sum_probs=77.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|++.|+++.++|+.....+....+.+|+...-+. ++.+.+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--iv~~~~~~------------------------ 161 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQA--VIIGSECE------------------------ 161 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcE--EEecCcCC------------------------
Confidence 4689999999999999999999999999999999999998432221 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc---EeeCCCccH-HHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG---FAMGITGTD-VAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG---Iam~~~~~~-~ak~~ad~vl~ 490 (668)
..+..|+--..+.+. ++..++.+++|||+.+|+.+-+.||+- +.-| ...+ .....+|+++.
T Consensus 162 ~~KP~p~~~~~a~~~-----~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g-~~~~~l~~~~a~~vi~ 226 (248)
T PLN02770 162 HAKPHPDPYLKALEV-----LKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTR-NPESLLMEAKPTFLIK 226 (248)
T ss_pred CCCCChHHHHHHHHH-----hCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCC-CCHHHHhhcCCCEEec
Confidence 012233322233332 477788999999999999999999964 3333 2222 22346788776
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00048 Score=69.88 Aligned_cols=122 Identities=12% Similarity=0.123 Sum_probs=80.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|+++|+++.++|+.....+..+.+.+|+...-+.+ +.+.+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~i--i~~~d~~------------------------ 162 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVV--LAAEDVY------------------------ 162 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEE--EecccCC------------------------
Confidence 46899999999999999999999999999999999999984322211 1111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE-eeCCCccHHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMGITGTDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI-am~~~~~~~ak~~ad~vl~~~~~~~i~ 498 (668)
..+..|+ +.....++ ++.....+++|||+.+|+.+-+.||+-+ ++...........+|+++. ++..+.
T Consensus 163 ~~KP~Pe----~~~~a~~~-l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~ 231 (260)
T PLN03243 163 RGKPDPE----MFMYAAER-LGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLS 231 (260)
T ss_pred CCCCCHH----HHHHHHHH-hCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHH
Confidence 0112222 33333222 4778889999999999999999999743 2221233333345677766 555544
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00038 Score=73.54 Aligned_cols=67 Identities=16% Similarity=0.157 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHHhhcCCCCC---EEEEEcCCccCHHHHhh-----CCccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGRE---VVAVTGDGTNDGPALKK-----ADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~---~v~~iGDg~ND~~mlk~-----A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
.+|...++.+++. ++..+. .++++||+.||..|++. +++||+|| ++... ..|+|.+. +-+.+.++|
T Consensus 300 ~~KG~Av~~Ll~~-~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~--dp~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLES-LGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLR--DPSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHh-cCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcC--CHHHHHHHH
Confidence 4999999998765 444433 25899999999999996 68999999 76543 35788887 567777766
Q ss_pred H
Q psy11770 502 M 502 (668)
Q Consensus 502 ~ 502 (668)
.
T Consensus 374 ~ 374 (384)
T PLN02580 374 K 374 (384)
T ss_pred H
Confidence 4
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00011 Score=74.04 Aligned_cols=71 Identities=17% Similarity=0.175 Sum_probs=54.0
Q ss_pred ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC--------CccEeeCCCccHHHHHhcchhcccCCchHH
Q psy11770 426 RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA--------DVGFAMGITGTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 426 r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A--------~vGIam~~~~~~~ak~~ad~vl~~~~~~~i 497 (668)
+..+.+|...++.++++ ++..+..++++||+.||.+|++.+ +.||+|+ .+ ..+..|++++. +...+
T Consensus 162 ~p~~~~Kg~a~~~~~~~-~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v 235 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWH-QPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQV 235 (244)
T ss_pred eeCCCCHHHHHHHHHHh-cccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHH
Confidence 44566899999988765 466667899999999999999998 4788885 33 23567889887 66667
Q ss_pred HHHHH
Q psy11770 498 VKAVM 502 (668)
Q Consensus 498 ~~~l~ 502 (668)
.+.+.
T Consensus 236 ~~~L~ 240 (244)
T TIGR00685 236 LEFLG 240 (244)
T ss_pred HHHHH
Confidence 66653
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00053 Score=75.80 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=82.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++ .+++ +
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~--~~d~-------------------------v 382 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETF--SIEQ-------------------------I 382 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeE--ecCC-------------------------C
Confidence 678999999999999999999999999999999999999843212111 1110 0
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc-EeeCC-CccHHHHHhcchhcccCCchHHHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGI-TGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG-Iam~~-~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
-....| .++....++ + +.+.+++|||+.+|+.+-+.||+- |++.. ...+.....+|+++. ++..+.+++
T Consensus 383 ~~~~kP----~~~~~al~~-l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l 453 (459)
T PRK06698 383 NSLNKS----DLVKSILNK-Y--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGIL 453 (459)
T ss_pred CCCCCc----HHHHHHHHh-c--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHH
Confidence 001123 344433322 2 457899999999999999999963 33321 222222345788876 677777666
Q ss_pred HH
Q psy11770 502 MW 503 (668)
Q Consensus 502 ~~ 503 (668)
.+
T Consensus 454 ~~ 455 (459)
T PRK06698 454 ST 455 (459)
T ss_pred HH
Confidence 43
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00069 Score=61.12 Aligned_cols=94 Identities=22% Similarity=0.295 Sum_probs=67.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHH
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDN--------INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLL 414 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~--------~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l 414 (668)
.++.+++.++++.|+++|++++++|+.. ...+..+.+.+|+.. .....
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~---~~~~~--------------------- 79 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPI---DVLYA--------------------- 79 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCE---EEEEE---------------------
Confidence 3578999999999999999999999998 777888888888731 11111
Q ss_pred hhhcCCcEEEEecCHhhHHHHHHHHHHhhcC-CCCCEEEEEcC-CccCHHHHhhCCccE
Q psy11770 415 DKVWPRLRVLARSSPSDKYTLVKGMIDSKIS-AGREVVAVTGD-GTNDGPALKKADVGF 471 (668)
Q Consensus 415 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~-~~~~~v~~iGD-g~ND~~mlk~A~vGI 471 (668)
+...+..+.++++.++++ ++ .+++.+++||| ..+|+.+-+.+|+-.
T Consensus 80 ----------~~~~~KP~~~~~~~~~~~-~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 80 ----------CPHCRKPKPGMFLEALKR-FNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred ----------CCCCCCCChHHHHHHHHH-cCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 000112234455555443 43 67889999999 699999999998643
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00063 Score=79.88 Aligned_cols=164 Identities=13% Similarity=0.173 Sum_probs=95.4
Q ss_pred CeEEEEEEeecCCCCCchHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHH---cCCccCCCceEEeehh-h---------
Q psy11770 332 HLTCLCVIGIEDPVRPEVPEAIKKC-QRAGITIRMVTGDNINTARSIATK---CGIVKPGEDYLILEGK-E--------- 397 (668)
Q Consensus 332 ~l~~lG~~~~~d~l~~~~~~~I~~l-~~aGI~v~~~TGd~~~ta~~ia~~---~gi~~~~~~~i~~~g~-~--------- 397 (668)
|.|++-.....-.+.+++.+++++| ++.|+.|+++|||...+....... +++...++..+...++ .
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~ 683 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVAD 683 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhh
Confidence 4455533322335678999999997 788999999999999998887754 4555555544332221 0
Q ss_pred --HHHhh--------hcCc-------------------hhhh-------HHHHhhhcCC--cEE-------EEecCHhhH
Q psy11770 398 --FNRRV--------RDNN-------------------GEVQ-------QNLLDKVWPR--LRV-------LARSSPSDK 432 (668)
Q Consensus 398 --~~~~~--------~~~~-------------------~~~~-------~~~l~~~~~~--~~v-------~~r~~p~~K 432 (668)
+.... .... .... ...+...... ..+ =.+..-.+|
T Consensus 684 ~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnK 763 (854)
T PLN02205 684 CSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSK 763 (854)
T ss_pred HHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCH
Confidence 00000 0000 0000 0011111111 111 122333489
Q ss_pred HHHHHHHHHh--hcCCCCCEEEEEcCCccCHHHHhhCC--------------ccEeeCCCccHHHHHhcchhcccCCchH
Q psy11770 433 YTLVKGMIDS--KISAGREVVAVTGDGTNDGPALKKAD--------------VGFAMGITGTDVAKEASDIILTDDNFSS 496 (668)
Q Consensus 433 ~~iv~~l~~~--~~~~~~~~v~~iGDg~ND~~mlk~A~--------------vGIam~~~~~~~ak~~ad~vl~~~~~~~ 496 (668)
...++.+++. .++...+.|+++||+.||.+|++.++ ++|.+| .+. ..|.+-+. +-..
T Consensus 764 G~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG-~~~----S~A~y~L~--d~~e 836 (854)
T PLN02205 764 GLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG-QKP----SKAKYYLD--DTAE 836 (854)
T ss_pred HHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC-CCC----ccCeEecC--CHHH
Confidence 9999988642 23455678999999999999999885 566677 332 44566666 4566
Q ss_pred HHHHHH
Q psy11770 497 IVKAVM 502 (668)
Q Consensus 497 i~~~l~ 502 (668)
+.++|.
T Consensus 837 V~~lL~ 842 (854)
T PLN02205 837 IVRLMQ 842 (854)
T ss_pred HHHHHH
Confidence 666653
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00086 Score=66.56 Aligned_cols=96 Identities=9% Similarity=0.044 Sum_probs=68.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+...-+. ++.. .+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~-iv~s-~~-------------------------- 144 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDL-LLST-HT-------------------------- 144 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCE-EEEe-ee--------------------------
Confidence 5789999999999999999999999998888888888887432111 1110 00
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG 470 (668)
+.+..| +.++.....++ ++..++.+++|||+.+|+.+-+.||+.
T Consensus 145 ~~~~KP--~p~~~~~~~~~-~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 145 FGYPKE--DQRLWQAVAEH-TGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred CCCCCC--CHHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 011122 23344433332 577888999999999999999999996
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0013 Score=64.99 Aligned_cols=114 Identities=13% Similarity=0.162 Sum_probs=74.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+.....+....+..|+.. .. . ++.+.+..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~-~-i~~~~~~~------------------------ 135 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PE-V-FVTAERVK------------------------ 135 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-cc-E-EEEHHHhc------------------------
Confidence 468999999999999999999999988777777667777721 11 1 22222110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc-EeeCCCcc-HHHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGT-DVAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG-Iam~~~~~-~~ak~~ad~vl~ 490 (668)
..+..|+-=....+. ++..++.+++|||+.+|+.+-+.||+. |++. .+. ......+|+++.
T Consensus 136 ~~KP~p~~~~~~~~~-----~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 136 RGKPEPDAYLLGAQL-----LGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred CCCCCcHHHHHHHHH-----cCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 011223222222232 477789999999999999999999974 4444 332 222335666655
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00053 Score=66.58 Aligned_cols=93 Identities=18% Similarity=0.136 Sum_probs=65.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..--+.++. +++
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~--~~~------------------------- 157 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIW--MED------------------------- 157 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEe--ecC-------------------------
Confidence 45677789999999999999999999999999999999998432211111 000
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 467 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A 467 (668)
+..+..|+.-..+.+. ++..++.+++|||+.+|+.+-+.|
T Consensus 158 ~~~KP~p~~~~~~~~~-----~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 158 CPPKPNPEPLILAAKA-----LGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CCCCcCHHHHHHHHHH-----hCcCcccEEEEeCCHHHHHHHHhC
Confidence 0112344433333333 467788999999999999887764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0015 Score=62.07 Aligned_cols=95 Identities=17% Similarity=0.054 Sum_probs=59.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH--------HHHHHHHHcCCccCCCceEE-ee--hhhHHHhhhcCchhhhHHH
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNIN--------TARSIATKCGIVKPGEDYLI-LE--GKEFNRRVRDNNGEVQQNL 413 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~--------ta~~ia~~~gi~~~~~~~i~-~~--g~~~~~~~~~~~~~~~~~~ 413 (668)
+.|++.++++.|++.|+++.++|+.... ......+..|+. .++. .. +++.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~----~~~~~~~~~~~~~--------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD----DIYLCPHKHGDGC--------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC----EEEECcCCCCCCC---------------
Confidence 6799999999999999999999987641 122334445542 1110 00 0000
Q ss_pred HhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 414 LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 414 l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
-..+..|+-=..+.+. ++...+.+++|||+.+|+.+-+.|++-..
T Consensus 90 ---------~~~KP~p~~~~~~~~~-----l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 90 ---------ECRKPSTGMLLQAAEK-----HGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred ---------CCCCCCHHHHHHHHHH-----cCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 0112223222223332 46778899999999999999999996443
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0027 Score=60.39 Aligned_cols=150 Identities=19% Similarity=0.237 Sum_probs=93.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCc--eEEeehh-----hHHHhhh------cCchhhh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED--YLILEGK-----EFNRRVR------DNNGEVQ 410 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~--~i~~~g~-----~~~~~~~------~~~~~~~ 410 (668)
++-|++.++++.|++. ...+++|-.-...+..+|.-+|+...+-. -+.++.- +-...+. +..++..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4679999999999876 44556666667778899999998432111 0111110 0000000 0001101
Q ss_pred HHHHhhhcCCcEEEEecCHh---------------hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC-cc-Eee
Q psy11770 411 QNLLDKVWPRLRVLARSSPS---------------DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD-VG-FAM 473 (668)
Q Consensus 411 ~~~l~~~~~~~~v~~r~~p~---------------~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~-vG-Iam 473 (668)
.+.+++ +|.|..|. .|.++++.+.+. .......+++||+..|+.||+.+. -| +|+
T Consensus 162 fe~lDe------~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~el--e~~d~sa~~VGDSItDv~ml~~~rgrGglAv 233 (315)
T COG4030 162 FEKLDE------LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCEL--EGIDFSAVVVGDSITDVKMLEAARGRGGLAV 233 (315)
T ss_pred HHHHHH------HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhh--cCCCcceeEecCcccchHHHHHhhccCceEE
Confidence 111222 34454443 566677666542 334445788999999999999884 33 777
Q ss_pred CCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 474 GITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 474 ~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.-||.+-+...||+.+.+.+-..+..+|.
T Consensus 234 aFNGNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 234 AFNGNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred EecCCcccccccceEEeccchhhhhHHHH
Confidence 77899999999999888888888877774
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0031 Score=60.33 Aligned_cols=128 Identities=16% Similarity=0.116 Sum_probs=71.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNI---------------NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 408 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~ 408 (668)
.+.|++.+.+++|++.|+++.++|+.+. .....+.++.|+. -..+ ......-
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--f~~i-~~~~~~~---------- 95 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR--LDGI-YYCPHHP---------- 95 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc--cceE-EECCCCC----------
Confidence 3679999999999999999999998763 1112233344441 0000 0000000
Q ss_pred hhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe-eCCCc--cHH-HHHh
Q psy11770 409 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MGITG--TDV-AKEA 484 (668)
Q Consensus 409 ~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa-m~~~~--~~~-ak~~ 484 (668)
.+..-..+..|+--..+.+. ++...+.+++|||+.+|+.+-+.||+..- +. .+ .+. ....
T Consensus 96 ----------~~~~~~~KP~p~~~~~~~~~-----l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~ 159 (181)
T PRK08942 96 ----------EDGCDCRKPKPGMLLSIAER-----LNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGA 159 (181)
T ss_pred ----------CCCCcCCCCCHHHHHHHHHH-----cCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhccc
Confidence 00000112223322333332 47778899999999999999999996432 22 22 111 2223
Q ss_pred c--chhcccCCchHHHHHHH
Q psy11770 485 S--DIILTDDNFSSIVKAVM 502 (668)
Q Consensus 485 a--d~vl~~~~~~~i~~~l~ 502 (668)
+ |+++. ++..+.+++.
T Consensus 160 ~~~~~ii~--~l~el~~~l~ 177 (181)
T PRK08942 160 APGTWVLD--SLADLPQALK 177 (181)
T ss_pred CCCceeec--CHHHHHHHHH
Confidence 4 67665 5666666553
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0023 Score=64.38 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcC----CccCHHHHhh-CCccEeeC
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKK-ADVGFAMG 474 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGD----g~ND~~mlk~-A~vGIam~ 474 (668)
.+|...++.| + ..+.|+++|| |.||.+||+. -=.|+.+.
T Consensus 188 vnKg~al~~L-----~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFL-----E-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHh-----c-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 3799999987 3 7889999999 8999999997 66788876
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0014 Score=67.68 Aligned_cols=118 Identities=15% Similarity=0.190 Sum_probs=72.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.+......+-+..+..........+.+.+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~------------------------ 199 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP------------------------ 199 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC------------------------
Confidence 47899999999999999999999999888887776655321111111111111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc--cHHHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG--TDVAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~--~~~ak~~ad~vl~ 490 (668)
..+..|+-=..+.+. ++..++.+++|||+.+|+.+-+.||+.+..-..+ .+.....+|+++.
T Consensus 200 ~~KP~p~~~~~a~~~-----~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 200 KKKPDPDIYNLAAET-----LGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred CCCCCHHHHHHHHHH-----hCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 011222222223332 4677889999999999999999999665432122 1111234677765
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0019 Score=62.76 Aligned_cols=97 Identities=14% Similarity=0.261 Sum_probs=68.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|+++|+++.++|+-+...+....+.+|+...-+.+ +.+++.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i--~~s~~~------------------------- 144 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAV--LSADAV------------------------- 144 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhhee--Eehhhc-------------------------
Confidence 47899999999999999999999999999999999999984221111 111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
....|. ..+.+...++ ++...+.+++|||+.+|+.+-+.||+-.
T Consensus 145 -~~~KP~--~~~~~~~~~~-~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 145 -RAYKPA--PQVYQLALEA-LGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred -CCCCCC--HHHHHHHHHH-hCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 111232 2233333222 4777889999999999999999999754
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0021 Score=63.82 Aligned_cols=89 Identities=19% Similarity=0.255 Sum_probs=61.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDN----INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~----~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
.+.+++.+.++.+++.|+++.++|||. ..++..+.+..|+...+...+++.|+.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 467889999999999999999999975 568889998899831111111111110
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 470 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG 470 (668)
....+|...++. ...++++||..+|..+-+.||+-
T Consensus 172 -------~~K~~K~~~l~~---------~~i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 172 -------PGQYTKTQWLKK---------KNIRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -------CCCCCHHHHHHh---------cCCeEEEcCCHHHHHHHHHcCCc
Confidence 011344443332 12488999999999999999954
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0039 Score=66.07 Aligned_cols=120 Identities=13% Similarity=0.123 Sum_probs=79.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.||+.+.++.|+++|+++.++|+.....+..+.+.+|+..--+.+ +.+.+.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~I--v~sddv------------------------- 268 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVI--VAAEDV------------------------- 268 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEE--EecCcC-------------------------
Confidence 46799999999999999999999999999999999999984221111 111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe-eCCCccHHH-HHhcchhcccCCchHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MGITGTDVA-KEASDIILTDDNFSSI 497 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa-m~~~~~~~a-k~~ad~vl~~~~~~~i 497 (668)
.+..|+ .++.....+. ++..++.+++|||..+|+.+-+.||+-.. +. .+.+.. ...+|+++. ++..+
T Consensus 269 -~~~KP~--Peifl~A~~~-lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 269 -YRGKPD--PEMFIYAAQL-LNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred -CCCCCC--HHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEEC--CHHHH
Confidence 011222 2233322222 47788999999999999999999996433 22 222222 234777765 55555
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0016 Score=67.83 Aligned_cols=107 Identities=17% Similarity=0.086 Sum_probs=74.2
Q ss_pred ecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-CCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 341 IEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK-PGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 341 ~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~-~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
..+++.+++.+.++.|++.|++++++||++...+..+.+.+|+.. .-+.+ .|.+... ..+...
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i---~~~~~~~-----------~~~~~~-- 247 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDL---IGRPPDM-----------HFQREQ-- 247 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhh---hCCcchh-----------hhcccC--
Confidence 567899999999999999999999999999999999999998842 11110 0110000 000000
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCC-CCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISA-GREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~-~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
--.+..|+-+...++.+ .. ..+.++|+||..+|+.+-+.||+.+
T Consensus 248 ---~~~kp~p~~~~~~l~~~-----~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 248 ---GDKRPDDVVKEEIFWEK-----IAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred ---CCCCCcHHHHHHHHHHH-----hccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 00134556666666553 33 4589999999999999999999764
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0029 Score=62.49 Aligned_cols=96 Identities=14% Similarity=0.179 Sum_probs=67.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|+++|++++++|+-+...+....+.+|+...-+.++ .+.+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~--~~~~-------------------------- 145 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVI--TSEE-------------------------- 145 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEE--Eecc--------------------------
Confidence 478999999999999999999999999888888888998842211111 1100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vG 470 (668)
..+..|. .++.+...++ ++...+.+++|||.. +|+.+-+.||+-
T Consensus 146 ~~~~KP~--~~~~~~~~~~-~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 146 EGVEKPH--PKIFYAALKR-LGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CCCCCCC--HHHHHHHHHH-cCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 0112232 2223333222 477788999999998 999999999964
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0043 Score=58.59 Aligned_cols=116 Identities=15% Similarity=0.088 Sum_probs=73.2
Q ss_pred EEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHH
Q psy11770 334 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGD-NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 412 (668)
Q Consensus 334 ~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~ 412 (668)
......+-+-++.|++.+.++.|+++|+++.++|+. ....+..+...+|+....... .+ ..
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~------~~------------~~ 96 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV------PM------------HS 96 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc------cH------------HH
Confidence 344444445568899999999999999999999987 888899998999974211100 00 00
Q ss_pred HHhhhcCCcEEEEecCHhhH--HHHHHHHHHhhc--CCCCCEEEEEcCCccCHHHHhhCCccEee
Q psy11770 413 LLDKVWPRLRVLARSSPSDK--YTLVKGMIDSKI--SAGREVVAVTGDGTNDGPALKKADVGFAM 473 (668)
Q Consensus 413 ~l~~~~~~~~v~~r~~p~~K--~~iv~~l~~~~~--~~~~~~v~~iGDg~ND~~mlk~A~vGIam 473 (668)
.++ ..+.++-.+..| ..+.+.+... + +...+.+++|||...|+.+-++|++-++.
T Consensus 97 ~Fd-----~iv~~~~~~~~kp~~~i~~~~~~~-~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 97 LFD-----DRIEIYKPNKAKQLEMILQKVNKV-DPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred hce-----eeeeccCCchHHHHHHHHHHhhhc-ccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 000 012222111112 2233333111 1 35678999999999999999999976653
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0012 Score=62.23 Aligned_cols=98 Identities=15% Similarity=0.257 Sum_probs=70.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.+++.+.++.|++.|++++++|+..........+++|+...-+.++ .+.+..
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~--~~~~~~----------------------- 130 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEII--SSDDVG----------------------- 130 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEE--EGGGSS-----------------------
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccccccc--ccchhh-----------------------
Confidence 3578999999999999999999999999999999999999852222111 111100
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
...| +..+.+.+.++ ++..++.+++|||+..|+.+-+.||+.-
T Consensus 131 ---~~Kp--~~~~~~~~~~~-~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 131 ---SRKP--DPDAYRRALEK-LGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp ---SSTT--SHHHHHHHHHH-HTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred ---hhhh--HHHHHHHHHHH-cCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 0122 22333333333 4778899999999999999999998653
|
... |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0047 Score=58.83 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=63.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|++++++|+..... ..+..++|+...-+.++ .+.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~--~~~~-------------------------- 135 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVI--FSGD-------------------------- 135 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEE--EcCC--------------------------
Confidence 578999999999999999999999988877 55555688742211111 0000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG 470 (668)
.....|. ....+.+.++ ++...+.++++||...|+.+-+.+|+-
T Consensus 136 ~~~~KP~--~~~~~~~~~~-~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 136 VGRGKPD--PDIYLLALKK-LGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred CCCCCCC--HHHHHHHHHH-cCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 0011221 2222333222 467788999999999999999999873
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0033 Score=60.16 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=64.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+..--+.+ +.+.+
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v--~~~~~-------------------------- 137 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAI--VDADE-------------------------- 137 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEe--eehhh--------------------------
Confidence 58999999999999999999999987 5677788888884211111 11100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
..+..|. ..+.+...++ ++...+.+++|||+.+|+.+-+.||+..
T Consensus 138 ~~~~kp~--~~~~~~~~~~-~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 138 VKEGKPH--PETFLLAAEL-LGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred CCCCCCC--hHHHHHHHHH-cCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 0011222 2233333322 4667788999999999999999998753
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0022 Score=61.34 Aligned_cols=95 Identities=15% Similarity=0.221 Sum_probs=63.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++|+.|+++|+++.++|+... +....+.+|+...-+. ++.+.+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 137 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDA--IVDPAEI------------------------- 137 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcE--EEehhhc-------------------------
Confidence 5789999999999999999999997543 4567778887422111 1111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
.+..| +.++.+...++ ++...+.+++|||+.+|+.+-+.||+-.
T Consensus 138 -~~~kp--~p~~~~~~~~~-~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 138 -KKGKP--DPEIFLAAAEG-LGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred -CCCCC--ChHHHHHHHHH-cCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 11122 23333333222 4667788999999999999999999753
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0048 Score=56.82 Aligned_cols=101 Identities=17% Similarity=0.174 Sum_probs=64.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNI---------------NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 408 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~ 408 (668)
++.|++.++++.|+++|+++.++|+.+. ..+..+.+.+|+... ..+....+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~----------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPA----------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCC-----------
Confidence 4689999999999999999999998762 345566777777310 0000000000
Q ss_pred hhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 409 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 409 ~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
. ..- ....+.++++.+.++ ++...+.+++|||...|+.+-+.+++-..
T Consensus 95 -----------~-~~~---~~KP~~~~~~~~~~~-~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 95 -----------D-NCS---CRKPKPGLILEALKR-LGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -----------C-CCC---CCCCCHHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 0 000 012234445544443 47788899999999999999999987543
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0032 Score=62.24 Aligned_cols=95 Identities=17% Similarity=0.223 Sum_probs=66.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++. ++++++|+-....+..+.+++|+...-+.++. +.+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~--~~~-------------------------- 147 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFV--SED-------------------------- 147 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEE--cCc--------------------------
Confidence 4689999999999999 99999999999999999999998432111110 000
Q ss_pred EEecCHhhHHHHHHHHHHhhc-CCCCCEEEEEcCCc-cCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKI-SAGREVVAVTGDGT-NDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~-~~~~~~v~~iGDg~-ND~~mlk~A~vG 470 (668)
.....| +..+.+...++ + +...+.+++|||+. +|+.+-+.+|+-
T Consensus 148 ~~~~KP--~~~~~~~~~~~-~~~~~~~~~v~igD~~~~di~~A~~~G~~ 193 (224)
T TIGR02254 148 AGIQKP--DKEIFNYALER-MPKFSKEEVLMIGDSLTADIKGGQNAGLD 193 (224)
T ss_pred cCCCCC--CHHHHHHHHHH-hcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence 001122 22333333332 4 56778899999998 899999999963
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0052 Score=58.09 Aligned_cols=87 Identities=18% Similarity=0.205 Sum_probs=63.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDN-INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.+.+++.++++.|++.|++++++|+.+ ...+..+.+.+|+..
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~------------------------------------- 85 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV------------------------------------- 85 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE-------------------------------------
Confidence 578999999999999999999999988 566777777777621
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCcc
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVG 470 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vG 470 (668)
......|. ..+.....++ ++..++.+++|||.. .|+.+-+.||+-
T Consensus 86 ~~~~~KP~--p~~~~~~l~~-~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 86 LPHAVKPP--GCAFRRAHPE-MGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EcCCCCCC--hHHHHHHHHH-cCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 00011222 2233333332 467788899999998 799999999963
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0049 Score=61.27 Aligned_cols=40 Identities=25% Similarity=0.280 Sum_probs=35.7
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCc
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGD----NINTARSIATKCGIV 384 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd----~~~ta~~ia~~~gi~ 384 (668)
+.+++.+.++.++++|+++.++|++ ...++..+.+.+|+.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 4455999999999999999999999 677899999999994
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0035 Score=67.40 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=66.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH-HcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIAT-KCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~-~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+...-+. ++.+++.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~--ii~~d~v------------------------ 146 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSV--IVGGDEV------------------------ 146 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCE--EEehhhc------------------------
Confidence 467999999999999999999999999888777665 5677322111 1111110
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
.+..|. .++.....++ ++..++.+++|||+.+|+.+-+.||+...
T Consensus 147 --~~~KP~--p~~~~~a~~~-lgv~p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 147 --EKGKPS--PDIFLEAAKR-LNVEPSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred --CCCCCC--HHHHHHHHHH-cCCChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 111221 2222222222 46778899999999999999999997643
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0038 Score=57.52 Aligned_cols=108 Identities=15% Similarity=0.076 Sum_probs=71.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCce-EEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDY-LILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~-i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++|+.++.++.+++.+++++++|+....-...+-+.++=-..-.++ ++.+...+.. + .....
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~-----------d-----g~h~i 136 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHI-----------D-----GQHSI 136 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcC-----------C-----Cceee
Confidence 47999999999999999999999999988888888776621000010 1111100000 0 00001
Q ss_pred EEEe--cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLAR--SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r--~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
++.. .-..+|...|+.+ ..+.+.+.++|||+.|+.+-+.+|+=.|
T Consensus 137 ~~~~ds~fG~dK~~vI~~l-----~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 137 KYTDDSQFGHDKSSVIHEL-----SEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred ecCCccccCCCcchhHHHh-----hcCCceEEEecCCcccccHhhhhhhHhh
Confidence 1111 1125789999986 5567789999999999999999998875
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0065 Score=60.16 Aligned_cols=122 Identities=11% Similarity=0.140 Sum_probs=76.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+ +|+++.++|+.....+....+++|+...-+. .+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~--------------------------------v~ 141 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDL--------------------------------LV 141 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCE--------------------------------EE
Confidence 46899999999999 6899999999988888888888888421111 11
Q ss_pred EEecC--HhhHHHHHHHHHHhhcCCC-CCEEEEEcCCc-cCHHHHhhCCccE-eeCCCccHH-HHHhcchhcccCCchHH
Q psy11770 424 LARSS--PSDKYTLVKGMIDSKISAG-REVVAVTGDGT-NDGPALKKADVGF-AMGITGTDV-AKEASDIILTDDNFSSI 497 (668)
Q Consensus 424 ~~r~~--p~~K~~iv~~l~~~~~~~~-~~~v~~iGDg~-ND~~mlk~A~vGI-am~~~~~~~-ak~~ad~vl~~~~~~~i 497 (668)
.+... +..+..+.....++ ++.. .+.+++|||+. +|+.+-+.||+-. .+...+... ....+|+++. ++..+
T Consensus 142 ~~~~~~~~KP~p~~~~~~~~~-~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el 218 (224)
T PRK09449 142 ISEQVGVAKPDVAIFDYALEQ-MGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSEL 218 (224)
T ss_pred EECccCCCCCCHHHHHHHHHH-cCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHH
Confidence 22110 11122344443333 4543 46899999998 7999999999753 333112111 1124667665 56666
Q ss_pred HHHH
Q psy11770 498 VKAV 501 (668)
Q Consensus 498 ~~~l 501 (668)
.+++
T Consensus 219 ~~~l 222 (224)
T PRK09449 219 EQLL 222 (224)
T ss_pred HHHH
Confidence 6544
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0089 Score=59.10 Aligned_cols=100 Identities=14% Similarity=0.174 Sum_probs=58.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH-HHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARS-IATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~-ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.+.|+.|++.|+++.++||-....... ..+..++...-..+ +.+.+.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i--~~~~~~------------------------ 131 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHV--VTGDDP------------------------ 131 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEE--EECChh------------------------
Confidence 468999999999999999999999987654432 22222332111111 111100
Q ss_pred EEEecCHhhHHHHHHHHHHhhcC---CCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKIS---AGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~---~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
-+.+..|+ ..+.....++ ++ ...+.+++|||+..|+.+-+.||+...
T Consensus 132 ~~~~~KP~--p~~~~~a~~~-~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 132 EVKQGKPA--PDIFLAAARR-FEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred hccCCCCC--cHHHHHHHHH-hCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 00011222 1222222222 23 567889999999999999999996443
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.019 Score=52.50 Aligned_cols=115 Identities=16% Similarity=0.230 Sum_probs=81.1
Q ss_pred HHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEE
Q psy11770 285 NVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIR 364 (668)
Q Consensus 285 ~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~ 364 (668)
-..+.+.++|.|.+.+-.. -|+++-- ..+..|++++-+..++++|+++.
T Consensus 18 i~~~~L~~~Gikgvi~DlD-----------------------------NTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~ 66 (175)
T COG2179 18 ITPDILKAHGIKGVILDLD-----------------------------NTLVPWD--NPDATPELRAWLAELKEAGIKVV 66 (175)
T ss_pred CCHHHHHHcCCcEEEEecc-----------------------------Cceeccc--CCCCCHHHHHHHHHHHhcCCEEE
Confidence 3456788899999877421 1333321 23578999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhc
Q psy11770 365 MVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKI 444 (668)
Q Consensus 365 ~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~ 444 (668)
++|..+...+...++.+|+. -++--..|..+ .+-+++.+ .
T Consensus 67 vvSNn~e~RV~~~~~~l~v~-------------------------------------fi~~A~KP~~~-~fr~Al~~--m 106 (175)
T COG2179 67 VVSNNKESRVARAAEKLGVP-------------------------------------FIYRAKKPFGR-AFRRALKE--M 106 (175)
T ss_pred EEeCCCHHHHHhhhhhcCCc-------------------------------------eeecccCccHH-HHHHHHHH--c
Confidence 99999999999999999993 12222234332 23344433 4
Q ss_pred CCCCCEEEEEcCC-ccCHHHHhhCCcc
Q psy11770 445 SAGREVVAVTGDG-TNDGPALKKADVG 470 (668)
Q Consensus 445 ~~~~~~v~~iGDg-~ND~~mlk~A~vG 470 (668)
+.+.+.|+|+||. ..|+-+=+.+|+-
T Consensus 107 ~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 107 NLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred CCChhHEEEEcchhhhhhhcccccCcE
Confidence 7889999999998 5688776666643
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0079 Score=55.66 Aligned_cols=90 Identities=16% Similarity=0.257 Sum_probs=60.3
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
..+++.+.++.|++.|+++.++|+.....+....+.. +... -..+...+ .+
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f~~i~~~~--------------------------~~- 115 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-FDLILGSD--------------------------EF- 115 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-CcEEEecC--------------------------CC-
Confidence 3478999999999999999999999999888887775 4211 11111100 00
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD 468 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~ 468 (668)
. ..| +......+.++ ++..+ .+++|||+.+|+.+-+.||
T Consensus 116 ~-~Kp--~~~~~~~~~~~-~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 116 G-AKP--EPEIFLAALES-LGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred C-CCc--CHHHHHHHHHH-cCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 0 122 23444444333 46666 8999999999999988775
|
HAD subfamilies caused by an overly broad single model. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.013 Score=55.75 Aligned_cols=38 Identities=8% Similarity=0.190 Sum_probs=34.3
Q ss_pred CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy11770 347 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 347 ~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 384 (668)
+.+...+.+|+++|++|+.+|.........+-+++|+-
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 45778999999999999999999999999999999984
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.015 Score=61.16 Aligned_cols=67 Identities=18% Similarity=0.213 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHhhcCCC---CCEEEEEcCCccCHHHHhhC-----CccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAG---REVVAVTGDGTNDGPALKKA-----DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~---~~~v~~iGDg~ND~~mlk~A-----~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
.+|...++.+++. +... ...++++||...|-.|++.. ++||.+| .... ...|+|.+. +-+.+.++|
T Consensus 282 ~dKG~Av~~LL~~-l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG-~~~k--~T~A~y~L~--dp~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLES-LGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVS-KFPK--DTDASYSLQ--DPSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHh-cccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEEC-CCCC--CCcceEeCC--CHHHHHHHH
Confidence 4899999998764 2322 34689999999999999865 4677777 3221 256788886 667777666
Q ss_pred H
Q psy11770 502 M 502 (668)
Q Consensus 502 ~ 502 (668)
.
T Consensus 356 ~ 356 (366)
T PLN03017 356 A 356 (366)
T ss_pred H
Confidence 3
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.011 Score=56.14 Aligned_cols=121 Identities=17% Similarity=0.112 Sum_probs=66.1
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH---------------HHHHHHHHcCCccCCCceEEe-ehhhHHHhhhcCchh
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNIN---------------TARSIATKCGIVKPGEDYLIL-EGKEFNRRVRDNNGE 408 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~---------------ta~~ia~~~gi~~~~~~~i~~-~g~~~~~~~~~~~~~ 408 (668)
+.|++.++|+.|+++|+++.++|.-+.. ....+..+.|+.- ..++.. .+..-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~~~~~~~~--------- 95 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL--DGIYYCPHHPEGV--------- 95 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc--cEEEECCCCCccc---------
Confidence 5799999999999999999999987641 1112233333310 000000 000000
Q ss_pred hhHHHHhhhcCCc-EEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE--eeCCCccH--H-HH
Q psy11770 409 VQQNLLDKVWPRL-RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF--AMGITGTD--V-AK 482 (668)
Q Consensus 409 ~~~~~l~~~~~~~-~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI--am~~~~~~--~-ak 482 (668)
..+ .-.....| +..++....++ ++...+.++||||..+|+.+-+.|++.. .+. .+.. . ..
T Consensus 96 ----------~~~~~~~~~~KP--~p~~~~~a~~~-~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~ 161 (176)
T TIGR00213 96 ----------EEFRQVCDCRKP--KPGMLLQARKE-LHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAE 161 (176)
T ss_pred ----------ccccCCCCCCCC--CHHHHHHHHHH-cCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCccccccc
Confidence 000 00001122 23333333332 4778889999999999999999999853 332 2321 1 12
Q ss_pred Hhcchhcc
Q psy11770 483 EASDIILT 490 (668)
Q Consensus 483 ~~ad~vl~ 490 (668)
..+|+++.
T Consensus 162 ~~ad~~i~ 169 (176)
T TIGR00213 162 NIADWVLN 169 (176)
T ss_pred ccCCEEec
Confidence 34777775
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0061 Score=56.97 Aligned_cols=98 Identities=21% Similarity=0.182 Sum_probs=64.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCccCCCceEEee---hhhHHHhhhcC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDN---------------INTARSIATKCGIVKPGEDYLILE---GKEFNRRVRDN 405 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~---------------~~ta~~ia~~~gi~~~~~~~i~~~---g~~~~~~~~~~ 405 (668)
++-|++.++|+.|+++|+++.++|... ...+..+.+.+|+. -+.++... +.+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~-------- 98 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDN-------- 98 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCC--------
Confidence 467999999999999999999999852 34556667777772 01111000 000
Q ss_pred chhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 406 NGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 406 ~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
.. ... -|..++..+.++ ++...+.+++|||+.+|+.+-+.+++...
T Consensus 99 -----------------~~-~~K--P~~~~~~~~~~~-~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 99 -----------------CD-CRK--PKIKLLEPYLKK-NLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -----------------CC-CCC--CCHHHHHHHHHH-cCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00 012 223444444333 46677889999999999999999997654
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.003 Score=58.28 Aligned_cols=95 Identities=16% Similarity=0.026 Sum_probs=66.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++|++.+.++.|+ .++++.++|+-....+..+.+.+++...-... ++.+++..
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~-i~~~~d~~------------------------ 98 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYR-RLFRDECV------------------------ 98 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeee-EEECcccc------------------------
Confidence 57999999999998 57999999999999999999998873210011 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
+..|. +.+.+.. ++...+.+++|||..+|..+-+.+++-|.
T Consensus 99 --~~KP~----~~k~l~~--l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 99 --FVKGK----YVKDLSL--LGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred --ccCCe----EeecHHH--cCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 11221 3333322 46788999999999999999888877664
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0086 Score=59.18 Aligned_cols=117 Identities=20% Similarity=0.317 Sum_probs=74.0
Q ss_pred CCCCchHHHHHHH--HHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 344 PVRPEVPEAIKKC--QRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 344 ~l~~~~~~~I~~l--~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
|+.|+.++.++.+ ++.|+.+.++|.-+......+-+.-|+...-.. +.-+...++. ++...-. ....
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~-I~TNpa~~~~-----~G~l~v~-----pyh~ 139 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE-IFTNPACFDA-----DGRLRVR-----PYHS 139 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce-EEeCCceecC-----CceEEEe-----CccC
Confidence 5789999999999 568999999999999999999999998532222 1111111111 0000000 0000
Q ss_pred EEEEecCHh-hHHHHHHHHHHhhcC--CCCCEEEEEcCCccC-HHHHh--hCCccE
Q psy11770 422 RVLARSSPS-DKYTLVKGMIDSKIS--AGREVVAVTGDGTND-GPALK--KADVGF 471 (668)
Q Consensus 422 ~v~~r~~p~-~K~~iv~~l~~~~~~--~~~~~v~~iGDg~ND-~~mlk--~A~vGI 471 (668)
.-|.+|.|. =|..+++.++....+ ...+.|++||||.|| +|+++ .+|+-.
T Consensus 140 h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 140 HGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 123455553 699999988765322 235899999999999 56654 455444
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.0099 Score=53.27 Aligned_cols=95 Identities=8% Similarity=0.092 Sum_probs=61.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGD-NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+. .+.+..+ ...++. .
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~---~~~i~~l-----------------~~~f~~-----~ 83 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED---FGIIFPL-----------------AEYFDP-----L 83 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc---cccchhh-----------------Hhhhhh-----h
Confidence 68999999999999999999999999 77777777776661 0000000 000111 1
Q ss_pred EEEecCHhhHHHHHHHHHHhhcC--CCCCEEEEEcCCccCHHHHhh
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKIS--AGREVVAVTGDGTNDGPALKK 466 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~--~~~~~v~~iGDg~ND~~mlk~ 466 (668)
+.++..| |.+.+....++ ++ ..++.++++||...|...++.
T Consensus 84 ~~~~~~p--kp~~~~~a~~~-lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 84 TIGYWLP--KSPRLVEIALK-LNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred hhcCCCc--HHHHHHHHHHH-hcCCCCcceEEEECCCHhHHHHHHh
Confidence 1121223 34444444333 46 788999999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.015 Score=56.58 Aligned_cols=95 Identities=15% Similarity=0.225 Sum_probs=62.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|+++|+++.++|+-... +....+.+|+...-+.++. +.+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~--s~~-------------------------- 155 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVT--SYE-------------------------- 155 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEe--ecc--------------------------
Confidence 57899999999999999999999986654 4667777887321111110 000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vG 470 (668)
+....|+ ..+.+...++ ++..++.+++|||+. +|+.+-+.||+-
T Consensus 156 ~~~~KP~--~~~~~~~~~~-~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 156 VGAEKPD--PKIFQEALER-AGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred cCCCCCC--HHHHHHHHHH-cCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 0001222 2333333332 477888999999997 899999998864
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.015 Score=60.98 Aligned_cols=95 Identities=11% Similarity=0.134 Sum_probs=73.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK----CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~----~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
++.+++.++|+.|+++|+++.++|..+...+..+.++ +++...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~--------------------------------- 77 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED--------------------------------- 77 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH---------------------------------
Confidence 3578999999999999999999999999999998887 666210
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
.......+..|...++.+.++ ++...+.+++|||...|+.+.+.+...+.+-
T Consensus 78 --f~~~~~~~~pk~~~i~~~~~~-l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 78 --FDARSINWGPKSESLRKIAKK-LNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred --eeEEEEecCchHHHHHHHHHH-hCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 011122244566666666554 5788899999999999999999998876543
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >KOG3120|consensus | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.025 Score=54.00 Aligned_cols=125 Identities=22% Similarity=0.289 Sum_probs=76.5
Q ss_pred CCCCchHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHH-HHh-hhcCC
Q psy11770 344 PVRPEVPEAIKKCQRAGI-TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN-LLD-KVWPR 420 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~-~l~-~~~~~ 420 (668)
|+.|+..++|+.+++.|- .++++|.-|......+.+..|+.. +...+.......+.. .+. .-+..
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d------------~F~~IfTNPa~~da~G~L~v~pyH~ 151 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD------------LFSEIFTNPACVDASGRLLVRPYHT 151 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH------------HHHHHhcCCcccCCCCcEEeecCCC
Confidence 678999999999999996 999999999998888888888831 000000000000000 000 00000
Q ss_pred cEEEEecCHh-hHHHHHHHHHHhhcCCC--CCEEEEEcCCccC-HHHHhhCCccEeeCCCccHH
Q psy11770 421 LRVLARSSPS-DKYTLVKGMIDSKISAG--REVVAVTGDGTND-GPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 421 ~~v~~r~~p~-~K~~iv~~l~~~~~~~~--~~~v~~iGDg~ND-~~mlk~A~vGIam~~~~~~~ 480 (668)
-.-|.+|.+. =|..++..++.+.++.. .+.+..+|||.|| +|+++...--+||-..|-+.
T Consensus 152 ~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 152 QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 0123343333 37777777766544333 3489999999999 78888777777776444443
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.013 Score=57.93 Aligned_cols=96 Identities=11% Similarity=0.153 Sum_probs=64.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.| ++++.++|+.....+...-+..|+...-.. .++.+.+..
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~-~v~~~~~~~------------------------ 139 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD-KLFSGYDIQ------------------------ 139 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc-eEeeHHhcC------------------------
Confidence 4568999999998 499999999998888888888888422111 111211110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
+..| +.++.....++ ++..++.+++|||+.+|+.+-+.||+.+.
T Consensus 140 --~~KP--~p~~~~~a~~~-~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 140 --RWKP--DPALMFHAAEA-MNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred --CCCC--ChHHHHHHHHH-cCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 1122 22333333222 46777889999999999999999998775
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.023 Score=59.89 Aligned_cols=101 Identities=22% Similarity=0.179 Sum_probs=63.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGD---------------NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 408 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~ 408 (668)
++.|++.+.++.|+++|+++.++|+- ....+..+.+..|+.. +. +.+......
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f--d~-i~i~~~~~s--------- 97 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF--DE-VLICPHFPE--------- 97 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce--ee-EEEeCCcCc---------
Confidence 57899999999999999999999984 2334555666666621 11 111100000
Q ss_pred hhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 409 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 409 ~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
+ ...+| . .|..++..+.++ +......++||||+.+|..+-+.|++-..
T Consensus 98 ----------d--~~~~r-K--P~p~~l~~a~~~-l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 98 ----------D--NCSCR-K--PKTGLVEEYLAE-GAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ----------c--cCCCC-C--CCHHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 00011 2 233344443332 46677899999999999999999997654
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.024 Score=53.31 Aligned_cols=94 Identities=17% Similarity=0.185 Sum_probs=60.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH------------HHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHH
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNIN------------TARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 412 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~------------ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~ 412 (668)
+-|++.++++.|+++|+++.++|..+.. .+..+.+.+|+.. ..++..+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~---~~ii~~~~~--------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI---QVLAATHAG--------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE---EEEEecCCC---------------
Confidence 3599999999999999999999975542 3566778888731 111111100
Q ss_pred HHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcC--CCCCEEEEEcCCc--------cCHHHHhhCCccE
Q psy11770 413 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKIS--AGREVVAVTGDGT--------NDGPALKKADVGF 471 (668)
Q Consensus 413 ~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~--~~~~~v~~iGDg~--------ND~~mlk~A~vGI 471 (668)
..+ .|. ..+++.+.++ ++ ...+.++||||.. +|+.+-+.||+-.
T Consensus 105 -----------~~~-KP~--p~~~~~~~~~-~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 -----------LYR-KPM--TGMWEYLQSQ-YNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred -----------CCC-CCc--cHHHHHHHHH-cCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000 221 2233333332 34 5678899999986 6999999998765
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.073 Score=53.59 Aligned_cols=48 Identities=17% Similarity=0.302 Sum_probs=40.5
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc---CCc
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC---GIV 384 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~---gi~ 384 (668)
|.+.-.+++-|++.++++.|+++|++++++||+...+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 445556788999999999999999999999999998888877764 663
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.16 Score=51.49 Aligned_cols=40 Identities=23% Similarity=0.329 Sum_probs=34.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCc
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINT---ARSIATKCGIV 384 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~ 384 (668)
+-|++.++|+.|+++|++++++||++..+ .....+++|+.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 88999999999999999999999987775 55556667874
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.087 Score=53.12 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=39.2
Q ss_pred ecCCCCCchHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q psy11770 341 IEDPVRPEVPEAIKKCQRAGITIRMVTG---DNINTARSIATKCGIVKP 386 (668)
Q Consensus 341 ~~d~l~~~~~~~I~~l~~aGI~v~~~TG---d~~~ta~~ia~~~gi~~~ 386 (668)
-.+++-+++.++|++|++.|++++++|| +.........+++|+...
T Consensus 14 ~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 14 KGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 3456667999999999999999999996 888888888899998544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.038 Score=55.84 Aligned_cols=86 Identities=15% Similarity=0.144 Sum_probs=57.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINT---ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
.++-|++.+.++.+++.|+++.++|++.... +....++.|+.....+.
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~----------------------------- 167 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH----------------------------- 167 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce-----------------------------
Confidence 4578999999999999999999999988443 44566778884322222
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHh
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALK 465 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk 465 (668)
++.|-....|..-.+.+. ....+++++||..+|.....
T Consensus 168 ---lllr~~~~~K~~rr~~I~-----~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 168 ---LLLKKDKSSKESRRQKVQ-----KDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred ---EEeCCCCCCcHHHHHHHH-----hcCCEEEEECCCHHHhhhhh
Confidence 233322233444444432 23467999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.053 Score=53.44 Aligned_cols=97 Identities=11% Similarity=0.182 Sum_probs=64.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC---CccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCG---IVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g---i~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
-++.|++.++++.|+++|+++.++|..+......+.+..+ +..- ++....
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~---------------------------f~~~fd 146 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY---------------------------FSGYFD 146 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh---------------------------cceEEE
Confidence 4689999999999999999999999998877776665542 2100 000000
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
..+.....|+ ....+.++ ++..++.++++||...|+.+-+.||+-..
T Consensus 147 -~~~g~KP~p~----~y~~i~~~-lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 147 -TTVGLKTEAQ----SYVKIAGQ-LGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred -eCcccCCCHH----HHHHHHHH-hCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 0111112222 33333222 47778899999999999999999997654
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.043 Score=66.69 Aligned_cols=117 Identities=11% Similarity=0.157 Sum_probs=76.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.|++.+.++.|+++|+++.++|+.....+....+++|+....-+.+ +.+.+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~i-v~~~~-------------------------- 213 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAI-VSADA-------------------------- 213 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEE-EECcc--------------------------
Confidence 357999999999999999999999999999999889999841111111 11110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc---cEeeCCCccHHHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDVAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v---GIam~~~~~~~ak~~ad~vl~ 490 (668)
+.+..|+ .++.....++ ++..++.+++|||..+|+.+-+.|++ ++.-+....+.....+|+++.
T Consensus 214 ~~~~KP~--Pe~~~~a~~~-lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~ 280 (1057)
T PLN02919 214 FENLKPA--PDIFLAAAKI-LGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRK 280 (1057)
T ss_pred cccCCCC--HHHHHHHHHH-cCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 1112232 2333333322 57788899999999999999999996 332221112223345677776
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.14 Score=51.34 Aligned_cols=48 Identities=19% Similarity=0.149 Sum_probs=37.6
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH--HHHHHcCCc
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTAR--SIATKCGIV 384 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~--~ia~~~gi~ 384 (668)
|.+.-..++-|++.++++.|+++|+++.++|+.....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 333445678999999999999999999999986654444 566888884
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.073 Score=51.47 Aligned_cols=96 Identities=11% Similarity=0.041 Sum_probs=59.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.+ +.+++|..+........+.+|+..-...+ . ...+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~---------------------------f-~~i~ 124 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGA---------------------------F-SEVL 124 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCc---------------------------c-cEEE
Confidence 46899999999999985 56777775555444455566662110000 0 0012
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC--CccEe
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA--DVGFA 472 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A--~vGIa 472 (668)
.++.. ..|.+++....++ ++ .+.+++|||..+|+.+-++| |+-..
T Consensus 125 ~~~~~-~~kp~~~~~a~~~-~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 125 MCGHD-ESKEKLFIKAKEK-YG--DRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred EeccC-cccHHHHHHHHHH-hC--CCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 22222 1245566655443 34 57799999999999999999 98544
|
2 hypothetical protein; Provisional |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.045 Score=53.58 Aligned_cols=93 Identities=15% Similarity=0.131 Sum_probs=58.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHH--HHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINT--ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~t--a~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
++.|++.+.++.|+++|+++.++|+..... ........++...-+.
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~-------------------------------- 141 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDA-------------------------------- 141 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCE--------------------------------
Confidence 578999999999999999999999875433 2222222333111010
Q ss_pred EEEEe----cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 422 RVLAR----SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 422 ~v~~r----~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
.+.+. ..|+ ..+.+...++ ++..++.+++|||...|+.+-+.||+-.
T Consensus 142 v~~s~~~~~~KP~--p~~~~~~~~~-~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 142 VVESCLEGLRKPD--PRIYQLMLER-LGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred EEEeeecCCCCCC--HHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 11111 1222 2223332222 4677888999999999999999999754
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.27 Score=45.28 Aligned_cols=110 Identities=17% Similarity=0.199 Sum_probs=73.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH---HHHHc-----CCccCCCceEEeehhhHHHhhhcCchhhhHHH
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARS---IATKC-----GIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL 413 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~---ia~~~-----gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~ 413 (668)
+|..++++.+..+.+++.|++++-+|+|+.-.+.. ...+. ++ |.+. +.++...+..-
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~l--P~Gp-v~~sP~~l~~a------------ 89 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNL--PDGP-VLLSPDSLFSA------------ 89 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccC--CCCC-EEECCcchhhh------------
Confidence 37899999999999999999999999999655433 33333 33 2232 22222211110
Q ss_pred HhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 414 LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 414 l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
+.. .+..+-..+.|...++.++...........+++|+..+|+.+-+++++.-
T Consensus 90 ---l~r--Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 90 ---LHR--EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred ---hhc--cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCCh
Confidence 000 23445455689888888865422246678899999999999999988753
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.12 Score=49.43 Aligned_cols=95 Identities=13% Similarity=0.095 Sum_probs=64.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.++++.|+ .+++++|+.+...+....+.+|+...-+.++..+ + +
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~--~-------------------------~ 133 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFD--T-------------------------A 133 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEee--c-------------------------c
Confidence 36789999999998 4799999999999999999999843211111110 0 0
Q ss_pred EEe---cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 424 LAR---SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 424 ~~r---~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
-.+ ..| +.++.+...++ ++..++.+++|||...|+.+-+.||+..
T Consensus 134 ~~~~~~~KP--~p~~~~~~~~~-~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 134 NPDYLLPKP--SPQAYEKALRE-AGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred cCccCCCCC--CHHHHHHHHHH-hCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 000 133 22344433333 4778889999999999999999998754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.19 Score=49.49 Aligned_cols=42 Identities=21% Similarity=0.251 Sum_probs=34.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINT---ARSIATKCGIV 384 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~ 384 (668)
-+.-|++.+.++.+++.|++|+++|||.... +..-.++.|+.
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 3677999999999999999999999999765 44445567763
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.14 Score=53.79 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHhhcCCCC---CEEEEEcCCccCHHHHhhC-----CccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGR---EVVAVTGDGTNDGPALKKA-----DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~---~~v~~iGDg~ND~~mlk~A-----~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
.+|...++.+++. +...+ ..++++||...|-.|++.. |+||-+| .+.. ...|++.+. +-+.+.++|
T Consensus 268 ~dKG~Av~~Ll~~-~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~--dp~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLES-LGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQ--EPDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHh-cccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCC--CHHHHHHHH
Confidence 4899999998754 23222 2489999999999999853 6777776 3221 236788887 567777666
Q ss_pred H
Q psy11770 502 M 502 (668)
Q Consensus 502 ~ 502 (668)
.
T Consensus 342 ~ 342 (354)
T PLN02151 342 E 342 (354)
T ss_pred H
Confidence 4
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.12 Score=50.20 Aligned_cols=98 Identities=12% Similarity=0.165 Sum_probs=61.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK-CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.+.++.|+++|+++.++|+-+.......... .++...-+. +.. ..
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~-v~~-s~-------------------------- 135 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADH-IYL-SQ-------------------------- 135 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCE-EEE-ec--------------------------
Confidence 4689999999999999999999999876654332221 232110000 000 00
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
-+....| +.++.+...++ ++..++.++++||...|+.+-+.+|+...
T Consensus 136 ~~~~~KP--~p~~~~~~~~~-~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 136 DLGMRKP--EARIYQHVLQA-EGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred ccCCCCC--CHHHHHHHHHH-cCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 0011122 23344433333 57888999999999999999999997543
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.28 Score=45.89 Aligned_cols=91 Identities=19% Similarity=0.177 Sum_probs=66.3
Q ss_pred cCCCCCchHHHHHHHHHcCC--EEEEEcCC-------CHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHH
Q psy11770 342 EDPVRPEVPEAIKKCQRAGI--TIRMVTGD-------NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 412 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI--~v~~~TGd-------~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~ 412 (668)
++++.++..+.+++|++.+. +++++|.. ....|..+.+.+|+.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 46789999999999999987 59999986 4788999999999820
Q ss_pred HHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCC
Q psy11770 413 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKAD 468 (668)
Q Consensus 413 ~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~ 468 (668)
..+....|.-..++.+.+.+.......+.+++|||- ..|+-|=...|
T Consensus 110 ---------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 110 ---------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ---------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 112234675556677766432122457899999997 56877766655
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.28 Score=51.22 Aligned_cols=48 Identities=21% Similarity=0.276 Sum_probs=38.7
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCc
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIA---TKCGIV 384 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia---~~~gi~ 384 (668)
|.+.-.+.+-|++.++|+.|++.|++++++|++...+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 344445677899999999999999999999999977777666 567763
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.1 Score=52.04 Aligned_cols=67 Identities=21% Similarity=0.325 Sum_probs=32.2
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCC---CCEEEEEcCCccCHHHHhhC------CccEeeCCCcc-HHHHHhcchhccc
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAG---REVVAVTGDGTNDGPALKKA------DVGFAMGITGT-DVAKEASDIILTD 491 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~---~~~v~~iGDg~ND~~mlk~A------~vGIam~~~~~-~~ak~~ad~vl~~ 491 (668)
+=.|..-..|...++.+++. +... ...++++||...|-.|++.. +++|-++ ... ..-..+|+|-+.+
T Consensus 157 vEvrp~~~~KG~av~~ll~~-~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEE-LPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTT-S---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEEEeCCCChHHHHHHHHHh-cCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 34455555699999998654 1211 35799999999999999874 4577777 332 3344667776654
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.52 Score=46.57 Aligned_cols=98 Identities=16% Similarity=0.217 Sum_probs=73.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.|++.+.++.|++.|+.+.+.|+.+...+..+.+.+|+...-+. ++++.+...
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~--~v~~~dv~~---------------------- 140 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDV--IVTADDVAR---------------------- 140 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcch--hccHHHHhc----------------------
Confidence 36889999999999999999999999999999999999999543221 122222211
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
.+..|+-=....+. ++..+..+++|.|+.+.+.+-++||.-+
T Consensus 141 --~KP~Pd~yL~Aa~~-----Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 141 --GKPAPDIYLLAAER-----LGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred --CCCCCHHHHHHHHH-----cCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 13344443344443 4678999999999999999999999544
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.31 Score=46.50 Aligned_cols=94 Identities=13% Similarity=0.110 Sum_probs=62.3
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.|+ .+.++.|++. +++.++||.....+....++.|+...-+. ++.+++.
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~--i~~~~~~-------------------------- 138 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDA--VVAADDV-------------------------- 138 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceE--EEehhhc--------------------------
Confidence 3454 6899999875 89999999999999999999998432111 1111110
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
.+..| +.++.....++ ++..+..+++|||..+|+.+-+.||+-.
T Consensus 139 ~~~KP--~p~~~~~~~~~-~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 139 QHHKP--APDTFLRCAQL-MGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred cCCCC--ChHHHHHHHHH-cCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 01122 22233333222 4667788999999999999999999754
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.94 E-value=1.9 Score=43.65 Aligned_cols=46 Identities=20% Similarity=0.278 Sum_probs=38.1
Q ss_pred EEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy11770 336 LCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC 381 (668)
Q Consensus 336 lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~ 381 (668)
=|.+.-.+++=|++.++|+.|+++|++++++|.....+...+++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 3667777889999999999999999999999988877766554443
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.72 Score=46.57 Aligned_cols=132 Identities=13% Similarity=0.165 Sum_probs=81.8
Q ss_pred cCCCCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC--CccCCCceE-Eeehhh-------------------H
Q psy11770 342 EDPVRPEVPEAIKKCQRA-GITIRMVTGDNINTARSIATKCG--IVKPGEDYL-ILEGKE-------------------F 398 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~g--i~~~~~~~i-~~~g~~-------------------~ 398 (668)
...+.++..+.++.|... ..-++|+|||+.........-.| +...++... ..+|+- +
T Consensus 38 ~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l 117 (266)
T COG1877 38 AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAIL 117 (266)
T ss_pred ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHH
Confidence 456789999999999887 45799999999998888776333 344444433 333321 1
Q ss_pred HHhhhcCch-------------------hh------hHH-H------HhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCC
Q psy11770 399 NRRVRDNNG-------------------EV------QQN-L------LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISA 446 (668)
Q Consensus 399 ~~~~~~~~~-------------------~~------~~~-~------l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~ 446 (668)
.+.+..-.+ .. ... . +.-...+..|-+|.+-..|...++.+..+ ...
T Consensus 118 ~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~-~~~ 196 (266)
T COG1877 118 EYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDE-LPF 196 (266)
T ss_pred HHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhc-CCC
Confidence 111111000 00 000 0 11112344566777777899999987654 344
Q ss_pred CCCEEEEEcCCccCHHHHhhCC----ccEeeC
Q psy11770 447 GREVVAVTGDGTNDGPALKKAD----VGFAMG 474 (668)
Q Consensus 447 ~~~~v~~iGDg~ND~~mlk~A~----vGIam~ 474 (668)
.+..+++.||...|-.|++..+ .+|-+|
T Consensus 197 ~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 197 DGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred CCCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 4456889999999999999987 444455
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.79 E-value=1.1 Score=42.41 Aligned_cols=104 Identities=22% Similarity=0.251 Sum_probs=60.3
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC--CcE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP--RLR 422 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~--~~~ 422 (668)
+.+++.+++..|+++|++++|+|.-. |+... ..+..++..... . -...+.+.-. .-.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rg-----yf~~~~f~~~~~----~-m~~~l~~~gv~id~i 90 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRG-----YFTEADFDKLHN----K-MLKILASQGVKIDGI 90 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------Ccccc-----CccHHHHHHHHH----H-HHHHHHHcCCccceE
Confidence 57999999999999999999999632 22110 111222221100 0 0011111100 112
Q ss_pred EEEecCHhh-------HHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc
Q psy11770 423 VLARSSPSD-------KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 470 (668)
Q Consensus 423 v~~r~~p~~-------K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG 470 (668)
.+|.-.|++ |.-++....++ ++.+.....+|||...|..+-..|+++
T Consensus 91 ~~Cph~p~~~c~cRKP~~gm~~~~~~~-~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 91 LYCPHHPEDNCDCRKPKPGMLLSALKE-YNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred EECCCCCCCCCcccCCChHHHHHHHHH-hCCCccceEEecCcHHHHHHHHHCCCC
Confidence 344444442 33344444443 467888999999999999999998876
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=89.61 E-value=0.25 Score=42.12 Aligned_cols=48 Identities=21% Similarity=0.247 Sum_probs=35.1
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCc
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIA---TKCGIV 384 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia---~~~gi~ 384 (668)
|.+...+++-|++.++|+.|+++|++++++|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 344456778899999999999999999999987755544444 667774
|
... |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.13 E-value=0.74 Score=46.00 Aligned_cols=93 Identities=14% Similarity=0.136 Sum_probs=57.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|++. +++.++|..+.. .+..|+...-+. ++ .+.+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~-i~-~~~~-------------------------- 158 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEF-VL-RAGP-------------------------- 158 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhce-eE-eccc--------------------------
Confidence 4678999999999875 899999986654 245666211111 00 0000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCCccEee
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVGFAM 473 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~vGIam 473 (668)
..+..| +..+.....++ ++..++.+++|||+ ..|+.+-+.||+-...
T Consensus 159 ~~~~KP--~p~~~~~a~~~-~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 159 HGRSKP--FSDMYHLAAEK-LNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred CCcCCC--cHHHHHHHHHH-cCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 011122 23344333322 47778899999999 5999999999976553
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.68 E-value=2 Score=42.27 Aligned_cols=95 Identities=17% Similarity=0.234 Sum_probs=63.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.++++.+++. .+++++|.-....+....+++|+...-+.++..+ -
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~----------------------------~ 149 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISE----------------------------D 149 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEec----------------------------c
Confidence 5678999999999999 9999999988888889999999743322221111 0
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~vG 470 (668)
.....|..+ +-+...+. ++..++.+++|||+ .||+..-+.+|.-
T Consensus 150 ~g~~KP~~~--~f~~~~~~-~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 150 VGVAKPDPE--IFEYALEK-LGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred cccCCCCcH--HHHHHHHH-cCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 112234322 22222222 46778899999997 6785777777753
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=88.29 E-value=1.1 Score=45.64 Aligned_cols=52 Identities=13% Similarity=0.262 Sum_probs=42.4
Q ss_pred CC-CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhh
Q psy11770 345 VR-PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397 (668)
Q Consensus 345 l~-~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~ 397 (668)
+| |++.+++++|+++|+++.++|+...+.+....+++|+... -+.++.+|..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y-FdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY-FDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc-cCEEEECCcc
Confidence 45 9999999999999999999999999999999999999532 2344444443
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=88.10 E-value=1.9 Score=48.14 Aligned_cols=39 Identities=28% Similarity=0.513 Sum_probs=32.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCH------------HHHHHHHHHcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNI------------NTARSIATKCGI 383 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~------------~ta~~ia~~~gi 383 (668)
+.|++.+.|+.|+++|++++++|.-.. ..+..+.+++|+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 469999999999999999999998655 345666777776
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=87.57 E-value=2 Score=47.78 Aligned_cols=101 Identities=17% Similarity=0.133 Sum_probs=62.5
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK-CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++++.+ .++++|.+ +++|+-....+..+|++ +|+.. ++ |.+++.. .++... . .+
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VI---gTeLev~---~~G~~T--------G--~i 166 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VL---GTELEVS---KSGRAT--------G--FM 166 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EE---ecccEEC---cCCEEe--------e--ee
Confidence 5555444 45567755 99999999999999987 89841 11 1111100 000000 0 01
Q ss_pred EE--ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 424 LA--RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 424 ~~--r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
-. .+.-++|.+-++.. +...... .+.||+.||.|||+.|+.+++++
T Consensus 167 ~g~~~c~Ge~Kv~rl~~~----~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~ 214 (497)
T PLN02177 167 KKPGVLVGDHKRDAVLKE----FGDALPD-LGLGDRETDHDFMSICKEGYMVP 214 (497)
T ss_pred cCCCCCccHHHHHHHHHH----hCCCCce-EEEECCccHHHHHHhCCccEEeC
Confidence 11 13556788877743 2322223 68899999999999999999998
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=85.49 E-value=1.9 Score=43.89 Aligned_cols=50 Identities=14% Similarity=0.156 Sum_probs=40.6
Q ss_pred CCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehh
Q psy11770 346 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK 396 (668)
Q Consensus 346 ~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~ 396 (668)
.|++.++|++|+++|+++.++|+.+.+.+....+.+|+... -+.++..|.
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y-FDvII~~g~ 199 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY-FDIIICGGR 199 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc-ccEEEECCC
Confidence 39999999999999999999998888888999999999532 234444444
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=84.66 E-value=0.55 Score=43.91 Aligned_cols=96 Identities=14% Similarity=0.053 Sum_probs=63.3
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
.=..||++.+.++.|.+. +++++.|......|..+...++... ..+.
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~---~~f~----------------------------- 86 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGG---KVIS----------------------------- 86 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCC---CEEe-----------------------------
Confidence 335899999999999987 9999999999999999999888631 1110
Q ss_pred EEEEecC-HhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 422 RVLARSS-PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 422 ~v~~r~~-p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
.+++|-+ ...|...++.|.. ++.....|+++||...|..+-+.+++-+.
T Consensus 87 ~~l~r~~~~~~~~~~~K~L~~--l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 87 RRLYRESCVFTNGKYVKDLSL--VGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred EEEEccccEEeCCCEEeEchh--cCCChhhEEEEeCChhhhccCccCEeecC
Confidence 0111100 0001113333321 35667789999999988877666655543
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=84.61 E-value=2 Score=42.57 Aligned_cols=40 Identities=20% Similarity=0.344 Sum_probs=31.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHH---HHHHHHHHcCC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNIN---TARSIATKCGI 383 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~---ta~~ia~~~gi 383 (668)
+.-|++.+.++.+++.|++|+.+|||+.. .+..-.++.|+
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~ 157 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGF 157 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCC
Confidence 45578999999999999999999999855 33344556675
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=83.78 E-value=8.9 Score=45.50 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=31.0
Q ss_pred CCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC
Q psy11770 345 VRPEVPEAIKKCQRA-GITIRMVTGDNINTARSIATKCG 382 (668)
Q Consensus 345 l~~~~~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~g 382 (668)
+.++..++++.|.+. +..|+++|||...+.......++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 667888999999765 68999999999999888775533
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=83.67 E-value=1.2 Score=39.60 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=29.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTAR 375 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~ 375 (668)
+++.+++.++++.++++|++++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 568899999999999999999999999987543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=83.62 E-value=2.1 Score=40.24 Aligned_cols=86 Identities=10% Similarity=0.078 Sum_probs=53.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++ ++.++|+-+........+++|+...-+. ++.+++. -
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~--v~~~~~~------------------------~ 136 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDR--AFSVDTV------------------------R 136 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhh--hccHhhc------------------------C
Confidence 47889999998 3789999999888888899988321111 0111100 0
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 467 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A 467 (668)
.....|+-=..+.+. ++..++.+++|||+..|+.+-+++
T Consensus 137 ~~KP~p~~f~~~~~~-----~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 137 AYKPDPVVYELVFDT-----VGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred CCCCCHHHHHHHHHH-----HCCCHHHeEeEecChhhHHHHhcC
Confidence 112223221223333 467788999999999998876653
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=82.66 E-value=7.5 Score=39.25 Aligned_cols=41 Identities=24% Similarity=0.365 Sum_probs=31.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNIN----TARSIATKCGIV 384 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~----ta~~ia~~~gi~ 384 (668)
.|.-|++.+..+.+++.|++|+++|||... |..++ ++.|+.
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~ 188 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYH 188 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCC
Confidence 456789999999999999999999999854 33333 446763
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=81.28 E-value=13 Score=35.95 Aligned_cols=107 Identities=17% Similarity=0.173 Sum_probs=66.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.++|+.+..+++|+++||++.++|=-...+ + +.+..-..+.|.++.+....... ..... . .+
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~---------~-~~~~~~~~Isg~~li~~~lk~s~--~~~~i----~--~~ 136 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKEL---------I-PSENRPRYISGDRMVEAALKKSK--CDFKI----K--KV 136 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhh---------c-cccCCcceechHHHHHHHHHhcC--cccee----e--ee
Confidence 479999999999999999999999655443 1 12233345667766543221100 00000 0 11
Q ss_pred EE------------------ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc
Q psy11770 424 LA------------------RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV 469 (668)
Q Consensus 424 ~~------------------r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v 469 (668)
+| ...|+.|..=.+.++++ ++..++.+++|=|....+.+-+..|+
T Consensus 137 ~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~-~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 137 YAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSD-FNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred eeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHH-cCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 21 22344544433555444 58889999999999999999888764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 668 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-63 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 8e-60 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 8e-60 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 3e-59 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 6e-59 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-58 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-57 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-56 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 3e-27 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 5e-23 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 5e-18 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-14 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-14 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 6e-13 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 6e-13 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 2e-12 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-12 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 6e-12 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-06 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 668 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-153 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-151 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-150 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-111 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-105 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 4e-31 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-30 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-30 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-28 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-28 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-28 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 9e-20 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-08 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-06 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 4e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 468 bits (1207), Expect = e-153
Identities = 190/719 (26%), Positives = 313/719 (43%), Gaps = 97/719 (13%)
Query: 11 DEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRF 70
++ K+ LQ KL + Q+ S I + +I I D + R + +
Sbjct: 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINI-------GHFNDPVHGGSWIRGAIYY 296
Query: 71 FIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT 130
F + V + V A+PEGLP +T LA ++M K N +VR L + ET+G + ICSDKTGT
Sbjct: 297 FKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGT 356
Query: 131 LTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANEL-- 188
LTTN+M+ + ++ + + + ++ EG + + + + EL
Sbjct: 357 LTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELAT 416
Query: 189 ------------------PKQVGNKTECALLGFVVAIGKNYQTVRDDLP----------- 219
++VG TE AL V + VR+
Sbjct: 417 ICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVI 476
Query: 220 EEVFTRVYT--FNSVRKSMSTVI------PKKNGYRVYTKGASEIILKKCSYIYGRNGHL 271
++ + +T F+ RKSMS G +++ KGA E ++ +C+Y+
Sbjct: 477 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVR-VGTTR 535
Query: 272 EKFTKDMQGR-LVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIV 330
T ++ + L D LR +++A +D + E+ +
Sbjct: 536 VPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVL------DDSSRFMEYE 589
Query: 331 SHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDY 390
+ LT + V+G+ DP R EV +I+ C+ AGI + M+TGDN TA +I + GI E+
Sbjct: 590 TDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV 649
Query: 391 --LILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGR 448
G+EF D+ + + R AR PS K +V+ + +
Sbjct: 650 ADRAYTGREF-----DDLPLAE---QREACRRACCFARVEPSHKSKIVEYL-----QSYD 696
Query: 449 EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVY 508
E+ A+TGDG ND PALKKA++G AMG +GT VAK AS+++L DDNFS+IV AV GR +Y
Sbjct: 697 EITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIY 755
Query: 509 DSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTP 568
+++ +F+++ ++ NV V+ F+ A L VQ+LWVNL+ D L + AL P
Sbjct: 756 NNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDL 815
Query: 569 DLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPT 628
D++ R P + LIS + + Y G + + G G Y L
Sbjct: 816 DIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWW--FMYAEDGPGVTYHQLTH 873
Query: 629 QHF----------------------TIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFT 664
T+ + V + + N +N+ + +++ +
Sbjct: 874 FMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN--QSLMRMPPWV 930
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 463 bits (1193), Expect = e-151
Identities = 166/712 (23%), Positives = 290/712 (40%), Gaps = 102/712 (14%)
Query: 11 DEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRF 70
+ +K+ + ++ I ++ + F+R
Sbjct: 288 ENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAM-----------------CIGYTFLRA 330
Query: 71 FIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT 130
+ + ++V VPEGL VT+ L+ + K++ N +V++L+A ET+G+ + ICSDKTGT
Sbjct: 331 MVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGT 390
Query: 131 LTTNRMTAVQAYVCEVQYKNIPKYE------DIPEDIASKIVEGISVNSGYTSKIMAPEN 184
LT NRMT + + + D + + +++ + + + ++
Sbjct: 391 LTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCN--RAAFKSGQD 448
Query: 185 ANELPKQ--VGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT--FNSVRKSMSTVI 240
A +PK+ +G+ +E ALL F N R+ P +V FNS K ++
Sbjct: 449 AVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFP-----KVCEIPFNSTNKFQLSIH 503
Query: 241 ----PKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLR 296
P+ + + KGA E +L++CS I G + + + + G R
Sbjct: 504 TLEDPRDPRHVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREA-FQTAYLSLGGLGER 561
Query: 297 TISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKC 356
+ + + + S L+ ++ + DP R VP+A+ KC
Sbjct: 562 VLGFCQLYLSEKDYPPGY-----AFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKC 616
Query: 357 QRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL--- 413
+ AGI + MVTGD+ TA++IA GI+ G + + V N + +
Sbjct: 617 RTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVIN 676
Query: 414 -----------LDKVWPRLR--VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTND 460
L + V AR+SP K +V+ +VAVTGDG ND
Sbjct: 677 GMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESC-----QRLGAIVAVTGDGVND 731
Query: 461 GPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLT 520
PALKKAD+G AMGI G+D AK A+D+IL DDNF+SIV V GR ++D++ K + + LT
Sbjct: 732 SPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLT 791
Query: 521 VN---VVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYG 577
N + ++ + + PL + +L++ L D S++LA E D++ +P
Sbjct: 792 KNIPELTPYLIYITVSVPL---PLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRN 848
Query: 578 RTKALISKTMM--KNIIGQAIYQLVIIFGILFFG----------------------DKLL 613
+ + + + Q F F + L
Sbjct: 849 PKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDL 908
Query: 614 DIPTGRGAEYGSLPTQH---FTIIFNTFVLMTLFNEINARKIHG---QRNVF 659
G+ +G Q +T+ F + + + + + + Q+ F
Sbjct: 909 QDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFF 960
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 461 bits (1188), Expect = e-150
Identities = 177/712 (24%), Positives = 301/712 (42%), Gaps = 97/712 (13%)
Query: 11 DEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRF 70
+ ++ + ++ I + + ++ + I ++
Sbjct: 283 EVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL-----------------ILGYSWLEA 325
Query: 71 FIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT 130
I + ++V VPEGL VT+ L + K+M + N LV++L+A ET+G+ + ICSDKTGT
Sbjct: 326 VIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGT 385
Query: 131 LTTNRMTAVQAYVCEVQY-----KNIPKYEDIPEDIASKIVEGISV--NSGYTSKIMAPE 183
LT NRMT + + +N + I+ N + A +
Sbjct: 386 LTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNR---AVFQAGQ 442
Query: 184 NANELPKQ--VGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT--FNSVRKSMSTV 239
+ + K+ G+ +E ALL + + Q +RD P ++ FNS K ++
Sbjct: 443 DNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNP-----KIVEIPFNSTNKYQLSI 497
Query: 240 IPKKNG----YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGL 295
+ Y + KGA E IL +CS I NG E +DM+ +N + G
Sbjct: 498 HENEKSSESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEA-FQNAYLELGGLGE 555
Query: 296 RTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKK 355
R + + DK +PN + L + ++ + DP R VP+A+ K
Sbjct: 556 RVLGFCHFALPEDKYNEGYPFDADEPN-----FPTTDLCFVGLMAMIDPPRAAVPDAVGK 610
Query: 356 CQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQ---- 411
C+ AGI + MVTGD+ TA++IA GI+ G + + N + N +
Sbjct: 611 CRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVV 670
Query: 412 ------NLLDKVWPRL------RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN 459
+L +V + V AR+SP K +V+G +VAVTGDG N
Sbjct: 671 HGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGC-----QRQGAIVAVTGDGVN 725
Query: 460 DGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQL 519
D PALKKAD+G AMGI+G+DV+K+A+D+IL DDNF+SIV V GR ++D++ K + + L
Sbjct: 726 DSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTL 785
Query: 520 TVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRT 579
T N+ + + PL V +L ++L D + +++LA E D++ R+P
Sbjct: 786 TSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPK 845
Query: 580 KALISKTMMKNIIGQAIYQLVIIFGILFF------------------------GDKLLDI 615
+ + ++ I + + G + ++
Sbjct: 846 TDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVED 905
Query: 616 PTGRGAEYGSLPTQH---FTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFT 664
G+ Y T F + V++ + I + ++F+
Sbjct: 906 SFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRR--NSIFQQGMK 955
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 355 bits (914), Expect = e-111
Identities = 120/641 (18%), Positives = 243/641 (37%), Gaps = 100/641 (15%)
Query: 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFF 71
+ Q LT IG + +VI I V+ I R++
Sbjct: 231 NQVGHFQKVLT----AIGNFCICSIAIGMVIEI-------IVMY-----PIQRRKYRDGI 274
Query: 72 IVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTL 131
+ +L+ +P +P +++++A ++ + + + + A E M +CSDKTGTL
Sbjct: 275 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL 334
Query: 132 TTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQ 191
T N+++ V + EV K + + + + A + +
Sbjct: 335 TLNKLS-VDKNLVEVFCKGVE-----KDQVL----------------LFAAMASRV---E 369
Query: 192 VGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG-YRVYT 250
+ + A++G + + R + E F FN V K + +G + +
Sbjct: 370 NQDAIDAAMVGM----LADPKEARAGIREVHFL---PFNPVDKRTALTYIDGSGNWHRVS 422
Query: 251 KGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKA 310
KGA E IL+ K + D+ + V ++I+ A GLR++++A +
Sbjct: 423 KGAPEQILELA-----------KASNDLSKK-VLSIIDKYAERGLRSLAVARQVVPEKTK 470
Query: 311 EINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDN 370
E + + ++ + DP R + E I++ G+ ++M+TGD
Sbjct: 471 E------------SPGAP----WEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 514
Query: 371 INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 430
+ + + G+ L G + + ++++ + A P
Sbjct: 515 LAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIP-------VEELIEKADGFAGVFPE 567
Query: 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 490
KY +VK + + K +V +TGDG ND PALKKAD+G A+ TD A+ ASDI+LT
Sbjct: 568 HKYEIVKKLQERK-----HIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLT 621
Query: 491 DDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVN 550
+ S I+ AV+ R ++ + + + +++ + ++ F+ + + A +L +
Sbjct: 622 EPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT-IRIVFGFMLIALIWEFDFSAFMVLIIA 680
Query: 551 LIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGD 610
++ D + ++ + P K + + YQ ++ +
Sbjct: 681 ILND-GTIMTISKDRVKPSPTPDSW-------KLKEIFATGVVLGGYQAIMTVIFFWAAH 732
Query: 611 KLLDIPTGRGAEYGSLPTQH-FTIIFNTFVLMTLFNEINAR 650
K G ++ +++ R
Sbjct: 733 KTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTR 773
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 340 bits (874), Expect = e-105
Identities = 113/645 (17%), Positives = 226/645 (35%), Gaps = 116/645 (17%)
Query: 11 DEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRF 70
L + + + +++ +S + V+
Sbjct: 280 SGGSGHFTEVLNGIGTILLIL---VIFTLLIVWVSSFYRS--------------NPIVQI 322
Query: 71 FIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGT 130
+ + ++ VP GLP VT ++A + K +V+ L A E++ +CSDKTGT
Sbjct: 323 LEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGT 382
Query: 131 LTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPK 190
LT N+++ Y PED+ A K
Sbjct: 383 LTKNKLSLHDPYTVA---------GVDPEDLM---------------LTAC--LAASRKK 416
Query: 191 QVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT--FNSVRKSMSTVIPKKNG-YR 247
+ + + A L + K Y + L + + + F+ V K + V+ G
Sbjct: 417 KGIDAIDKAFLKSL----KYYPRAKSVLSK--YKVLQFHPFDPVSKKVVAVVESPQGERI 470
Query: 248 VYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVT 307
KGA +LK +++ +N + A G R++ +A K
Sbjct: 471 TCVKGAPLFVLKTVEED-------HPIPEEVDQA-YKNKVAEFATRGFRSLGVARKR--- 519
Query: 308 DKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVT 367
E + L ++ DP R + + + + + G++I+M+T
Sbjct: 520 -----------------GEGS----WEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLT 558
Query: 368 GDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARS 427
GD + AR + + G+ + L D G + ++ A
Sbjct: 559 GDAVGIARETSRQLGLGTNIYNAERLGLGGGG----DMPGSEVYDFVEAA----DGFAEV 610
Query: 428 SPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI 487
P KY +V+ + +VA+TGDG ND P+LKKAD G A+ +D A+ A+DI
Sbjct: 611 FPQHKYNVVEILQQRG-----YLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADI 664
Query: 488 ILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQML 547
+ +I+ A+ R ++ + ++ +++ +++ I + A+ + L ++
Sbjct: 665 VFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGL-WIAILNRSLNIELVV 723
Query: 548 WVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQ--LVIIFGI 605
++ + D +A+LA+A + K + + G ++ ++ +
Sbjct: 724 FIAIFAD-VATLAIAYDNAPYSQTPVKW-----------NLPKLWGMSVLLGVVLAVGTW 771
Query: 606 LFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINAR 650
+ G ++F L + R
Sbjct: 772 ITVT---TMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITR 813
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 4e-31
Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 43/164 (26%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397
I D RP + + ++K + G+ I +++GD + + ++ + I
Sbjct: 130 SFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI-------------- 175
Query: 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 457
+ SP DK +++ K+ V + GDG
Sbjct: 176 -----------------Q------EYYSNLSPEDKVRIIE-----KLKQNGNKVLMIGDG 207
Query: 458 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
ND AL ADV AMG G D++K +DIIL ++ +++ +
Sbjct: 208 VNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLI 250
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-30
Identities = 54/174 (31%), Positives = 73/174 (41%), Gaps = 44/174 (25%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397
VI + D +RPE EAI K + GI M+TGDN A+ +A + G+
Sbjct: 138 VIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL-------------- 183
Query: 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 457
D A P +K VK ++ V A+ GDG
Sbjct: 184 -----------------D------DYFAEVLPHEKAEKVK-----EVQQKY-VTAMVGDG 214
Query: 458 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 511
ND PAL +ADVG A+G GTDVA E +DI+L ++ + V R Y
Sbjct: 215 VNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 2e-30
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 44/164 (26%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397
+I + D ++ A+++ +R GI + M+TGDN +A +I+ + +
Sbjct: 157 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------- 202
Query: 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 457
D V+A P K VK K+ A VVA GDG
Sbjct: 203 -----------------D------LVIAEVLPHQKSEEVK-----KLQAKE-VVAFVGDG 233
Query: 458 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 234 INDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 276
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 1e-28
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 43/164 (26%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397
++ +EDP++ PE I + Q++GI I M+TGD+ TA ++A GI
Sbjct: 548 LLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------- 594
Query: 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 457
+V+A P DK +V ++ +VA+ GDG
Sbjct: 595 ------------------------KVVAEIMPEDKSRIVS-----ELKDKGLIVAMAGDG 625
Query: 458 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
ND PAL KAD+G AMG TGTDVA E++ + L + I KA
Sbjct: 626 VNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKAR 668
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 1e-28
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 44/164 (26%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397
+I + D ++ A+++ +R GI + M+TGDN +A +I+ + +
Sbjct: 451 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------- 496
Query: 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 457
D V+A P K VK K+ A VVA GDG
Sbjct: 497 -----------------D------LVIAEVLPHQKSEEVK-----KLQAKE-VVAFVGDG 527
Query: 458 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 528 INDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 570
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 3e-28
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 44/164 (26%)
Query: 338 VIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397
+I + D ++ A+++ +R GI + M+TGDN +A +I+ + +
Sbjct: 529 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------- 574
Query: 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG 457
D V+A P K VK K+ A VVA GDG
Sbjct: 575 -----------------D------LVIAEVLPHQKSEEVK-----KLQAKE-VVAFVGDG 605
Query: 458 TNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 606 INDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 648
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 9e-20
Identities = 30/158 (18%), Positives = 58/158 (36%), Gaps = 25/158 (15%)
Query: 192 VGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYT--FNSVRKSMSTVIPKKNG-YRV 248
+ N + A+L + ++ F+ R+ MS V+ + +++
Sbjct: 32 LKNLLDTAVLEGTDEESA-------RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQL 84
Query: 249 YTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTD 308
KGA + IL CS + NG + M + ++ V + + GLR +++A K
Sbjct: 85 VCKGALQEILNVCSQVR-HNGEIVPLDDIMLRK-IKRVTDTLNRQGLRVVAVATKYLPAR 142
Query: 309 KAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVR 346
+ + + DES+ L I D
Sbjct: 143 EGDYQR---------ADESD----LILEGYIAFLDHHH 167
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 70.7 bits (172), Expect = 1e-12
Identities = 69/526 (13%), Positives = 145/526 (27%), Gaps = 154/526 (29%)
Query: 145 EVQYKNIPKYEDIPEDIASKIVEGISVN--SGYTSKIMAPENANELPKQVGNKTECALLG 202
E QY+ Y+DI V+ I++ E + + + L
Sbjct: 13 EHQYQ----YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS-KDAVSGTLRL 67
Query: 203 FVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCS 262
F + K + V+ + EEV Y F + + + S +
Sbjct: 68 FWTLLSKQEEMVQKFV-EEVLRINYKF------------LMSPIKTEQRQPS---MMTRM 111
Query: 263 YIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPN 322
YI R+ RL N + A K V+ ++ +
Sbjct: 112 YIEQRD------------RL-YNDNQVFA-----------KYNVSRLQPYLKLR-QALLE 146
Query: 323 WDDESNIVSH------LTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRM------VTGDN 370
N++ T + A+ C + +M + N
Sbjct: 147 LRPAKNVLIDGVLGSGKTWV---------------ALDVCLSYKVQCKMDFKIFWLNLKN 191
Query: 371 INTARSIATK----CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL------------- 413
N+ ++ + P ++ N ++R + +Q L
Sbjct: 192 CNSPETVLEMLQKLLYQIDP--NWTSRSDHSSNIKLRIH--SIQAELRRLLKSKPYENCL 247
Query: 414 --LDKVW-PR-LRVLARSSPSDKYTLV----KGMIDSKISAGREVVAVTGDGTNDGPALK 465
L V + S L+ K + D +A +++ D +
Sbjct: 248 LVLLNVQNAKAWNAFNLSCK----ILLTTRFKQVTDFLSAATTTHISL--DHHSMTLTPD 301
Query: 466 KADVGFA--MGITGTDVAKEASDI----ILTDDNFSSIVKAVM---------WGRNVYDS 510
+ + D+ +E + SI+ + W D
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRL-------SIIAESIRDGLATWDNWKHVNCDK 354
Query: 511 ISKFLQFQLTVNVVAVIVAFIGACAV-QDS---PLKAVQMLWVNL-------IMDTLASL 559
++ ++ L V A +V S P + ++W ++ +++ L
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 560 ALATEMPT------PDLLLRKPYGRTKALISKTMMKNIIGQAIYQL 599
+L + P P + L + K + ++I+ Y +
Sbjct: 415 SLVEKQPKESTISIPSIYLEL---KVKLENEYALHRSIVDH--YNI 455
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 4e-08
Identities = 55/399 (13%), Positives = 110/399 (27%), Gaps = 146/399 (36%)
Query: 32 GSTIAILT----VVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVPE--- 84
I + T V +S ++ + E + + +P
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSM-TLTPDEVKSLLLKYLDCRPQDLPREVL 323
Query: 85 -GLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYV 143
P +++ +A S++ + + +H++ C+ + + L +
Sbjct: 324 TTNPRRLSI-IAESIRDGLATWDNWKHVN-CDKLTTIIESSLNV---LEPAEY---RKM- 374
Query: 144 CEVQYK---------NIP-----------KYEDIPEDIASK-----IVEG------ISVN 172
+ +IP D + +K +VE IS+
Sbjct: 375 ----FDRLSVFPPSAHIPTILLSLIWFDVIKSD-VMVVVNKLHKYSLVEKQPKESTISIP 429
Query: 173 SGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSV 232
S Y + EN L + + + Y + + + +
Sbjct: 430 SIYLELKVKLENEYALHRSIVDH---------------YN----------IPKTFDSDDL 464
Query: 233 RKSMSTVIPKKNGYRVYTKGASEIILKKCSYI-YGRNGHLEK---------FTK---D-- 277
P + Y Y S+I + HL+ F D
Sbjct: 465 IP------PYLDQY-FY------------SHIGH----HLKNIEHPERMTLFRMVFLDFR 501
Query: 278 -MQGRLVRNVIEPMACDG--LRTIS--IAYKDFVTDKAEINQVHIEGDPNWDD------- 325
++ ++ R+ G L T+ YK ++ D DP ++
Sbjct: 502 FLEQKI-RHDSTAWNASGSILNTLQQLKFYKPYICDN----------DPKYERLVNAILD 550
Query: 326 -----ESNIV-SHLTCLCVIGIEDPVRPEVPEAIKKCQR 358
E N++ S T L I + EA K+ QR
Sbjct: 551 FLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 4e-06
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 6/131 (4%)
Query: 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLI---LEGKEFNRR 401
+ + E I IR + + ++ G D+ + LEG R
Sbjct: 60 LPSSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR 119
Query: 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDG 461
+ N+ + + WP + + S++ K + ++S + + + GD D
Sbjct: 120 IYCNHASFDNDYIHIDWP---HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDV 176
Query: 462 PALKKADVGFA 472
A K +D+ FA
Sbjct: 177 EAAKLSDLCFA 187
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 449 EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 493
E++ + GD ND P + TD K SD + +D +
Sbjct: 171 EILVI-GDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFV-SDYS 212
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 668 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.92 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.93 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.91 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.83 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.61 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.51 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.47 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.43 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.4 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.37 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.37 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.36 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.36 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.36 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.34 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.34 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.3 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.3 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.3 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.28 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.28 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.27 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.24 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.24 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.21 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.19 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.13 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.12 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.08 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.06 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.03 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.02 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.0 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.99 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.98 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.96 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.96 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.93 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.92 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.89 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.87 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.84 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.83 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.76 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.76 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.76 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.72 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.69 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.68 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.64 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.63 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.62 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.61 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.59 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.58 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.54 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.54 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.53 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.47 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.47 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.46 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.45 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.44 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.44 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.44 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.44 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.44 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.44 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.43 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.41 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.41 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.37 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.36 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.35 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.33 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.31 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.3 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.29 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.28 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.27 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.26 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.25 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.24 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.23 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.23 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.22 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.22 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.21 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.21 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.2 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.19 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.16 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.16 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.16 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.16 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.16 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.11 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.09 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.08 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.07 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.03 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.02 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.0 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.96 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.96 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.94 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.9 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.86 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.84 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.83 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.7 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.7 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.64 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.63 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.55 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.53 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.41 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.35 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 97.34 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.26 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.23 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.22 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.17 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 97.07 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.97 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.93 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.83 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.67 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.38 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.33 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.29 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.17 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 96.16 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.69 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 95.25 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.18 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 94.89 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 94.6 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 93.85 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 93.29 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 93.26 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 92.98 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 92.84 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 91.58 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 90.75 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 87.87 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 87.49 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 83.27 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 82.34 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-93 Score=847.71 Aligned_cols=625 Identities=26% Similarity=0.363 Sum_probs=493.2
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.++.++.+.++||+|+++++++..+..++++++++++++++. .+.+| ...+.+++++++++
T Consensus 279 kI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~--------~~~~~~~i~l~v~~ 341 (1034)
T 3ixz_A 279 RIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMC---------IGYTF--------LRAMVFFMAIVVAY 341 (1034)
T ss_pred HHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hcchH--------HHHHHHHHHHHHhe
Confidence 56677788888999999999999999988877777665554321 13344 56788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCC------
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYE------ 155 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~------ 155 (668)
||||||++++++++++++||+++|++||+++++|+||++++||||||||||+|+|+|.++++++..+.......
T Consensus 342 iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 421 (1034)
T 3ixz_A 342 VPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTF 421 (1034)
T ss_pred eccccHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999876554321111
Q ss_pred CCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCce
Q psy11770 156 DIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKS 235 (668)
Q Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~ 235 (668)
....+..+.+...+..|+...............+...|+|+|.|+++++.+.+.+....+..++ .+.++||+|+|||
T Consensus 422 ~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~---~~~~~pF~s~rk~ 498 (1034)
T 3ixz_A 422 DQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFP---KVCEIPFNSTNKF 498 (1034)
T ss_pred CcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCc---ceEEeeecCCCce
Confidence 1112233455666666654321100000111234567999999999999988877766666655 4788999999999
Q ss_pred EEEEEee----CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhh
Q psy11770 236 MSTVIPK----KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAE 311 (668)
Q Consensus 236 msvvv~~----~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~ 311 (668)
|++++.. ++++.+|+|||||.|+++|+.+.. +|...+++++.++. +++..++++.+|+|||++|||.++.+++.
T Consensus 499 m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~-~~~~~~~~a~~G~RvLa~A~~~l~~~~~~ 576 (1034)
T 3ixz_A 499 QLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQWREA-FQTAYLSLGGLGERVLGFCQLYLSEKDYP 576 (1034)
T ss_pred EEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhc-CCceecCCHHHHHH-HHHHHHHHHhcCcHhheEeEEecChhhcc
Confidence 9998765 257899999999999999998764 56677888877665 46788999999999999999998765332
Q ss_pred hhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCc--
Q psy11770 312 INQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED-- 389 (668)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~-- 389 (668)
.+.. ...+..+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.+|.++|+++|+..++..
T Consensus 577 ~~~~-----~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i 651 (1034)
T 3ixz_A 577 PGYA-----FDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETV 651 (1034)
T ss_pred cccc-----cchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHH
Confidence 1100 011122346899999999999999999999999999999999999999999999999999999754321
Q ss_pred --------------------eEEeehhhHHHhhhcCchhhhHHHHhhhcCC--cEEEEecCHhhHHHHHHHHHHhhcCCC
Q psy11770 390 --------------------YLILEGKEFNRRVRDNNGEVQQNLLDKVWPR--LRVLARSSPSDKYTLVKGMIDSKISAG 447 (668)
Q Consensus 390 --------------------~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--~~v~~r~~p~~K~~iv~~l~~~~~~~~ 447 (668)
..+++|.++... ..+.+.+...+ ..+|+|++|++|.++++.+ +..
T Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~--------~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~l-----q~~ 718 (1034)
T 3ixz_A 652 EDIAARLRVPVDQVNRKDARACVINGMQLKDM--------DPSELVEALRTHPEMVFARTSPQQKLVIVESC-----QRL 718 (1034)
T ss_pred HHHHHhhCccchhccccccceeEEecHhhhhC--------CHHHHHHHHHhCCceEEEecCHHHHHHHHHHH-----HHc
Confidence 124445444322 22333333332 2589999999999999987 456
Q ss_pred CCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 448 REVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVI 527 (668)
Q Consensus 448 ~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~ 527 (668)
++.|+|+|||.||++||+.||+|||||++|++.+|++||+++.+++|+++.++++|||++|+|+++++.|.+++|+..++
T Consensus 719 g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~ 798 (1034)
T 3ixz_A 719 GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELT 798 (1034)
T ss_pred CCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCC-CCCCCCHHHHHHHHH-HHHHHHHHHHHH
Q psy11770 528 VAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR-TKALISKTMMKNIIG-QAIYQLVIIFGI 605 (668)
Q Consensus 528 ~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 605 (668)
+.+++.+++.+.|++++|+||+|+++|++|+++|+.|||++++|+|+|+++ +++++++.++...++ .+++++++.|+.
T Consensus 799 ~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~ 878 (1034)
T 3ixz_A 799 PYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTD 878 (1034)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988889999999999999999999999999999999999999999987 688999988776544 477776666555
Q ss_pred HHhhccc--------cCCCCC------------CCCCCCC-----cccchhhHHHHHHHHHHHHHHHHhhcccCCccccc
Q psy11770 606 LFFGDKL--------LDIPTG------------RGAEYGS-----LPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE 660 (668)
Q Consensus 606 ~~~~~~~--------~~~~~~------------~~~~~~~-----~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~ 660 (668)
+++.... +++... ++..|.. ....++|++|+++|++|++|.|+||+.+. ++|.
T Consensus 879 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~--s~~~ 956 (1034)
T 3ixz_A 879 YFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRL--SAFQ 956 (1034)
T ss_pred HHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCC--cccc
Confidence 4432111 111000 0000100 01237899999999999999999998653 6775
Q ss_pred -ccccCCCC
Q psy11770 661 -GLFTTHSV 668 (668)
Q Consensus 661 -~~~~n~~~ 668 (668)
++|+|+++
T Consensus 957 ~~~~~N~~l 965 (1034)
T 3ixz_A 957 QGFFRNRIL 965 (1034)
T ss_pred cCCcccHHH
Confidence 78999874
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-92 Score=836.15 Aligned_cols=625 Identities=28% Similarity=0.390 Sum_probs=490.8
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.++.++++.++||+|+.+++++..++.++++++++++++++. .+.+| ...+.+++++++++
T Consensus 274 ~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---------~~~~~--------~~~~~~~i~llv~~ 336 (1028)
T 2zxe_A 274 RIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---------LGYSW--------LEAVIFLIGIIVAN 336 (1028)
T ss_dssp HHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------TTCCH--------HHHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------ccCcH--------HHHHHHHHHHHHHH
Confidence 56677888889999999999999999998888777766554221 12345 45677888999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCC------
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYE------ 155 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~------ 155 (668)
||||||++++++++.++.+|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+.......
T Consensus 337 iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 416 (1028)
T 2zxe_A 337 VPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAF 416 (1028)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCC
T ss_pred cCchHHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999887664321110
Q ss_pred CCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCce
Q psy11770 156 DIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKS 235 (668)
Q Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~ 235 (668)
+...+..+.+....++|++........+.....+...|||+|.|+++++.+.+.+....+..++ .+.++||+|+|||
T Consensus 417 ~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~---~~~~~pF~s~rk~ 493 (1028)
T 2zxe_A 417 DKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNP---KIVEIPFNSTNKY 493 (1028)
T ss_dssp CSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSC---EEEEECCCTTTCE
T ss_pred ccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCc---eEEEeccCcccce
Confidence 0112333455666666654321000000000112457999999999999887555555555544 5788999999999
Q ss_pred EEEEEee----CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhh
Q psy11770 236 MSTVIPK----KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAE 311 (668)
Q Consensus 236 msvvv~~----~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~ 311 (668)
|+++++. ++++.+|+|||||.|+++|+.+.. +|+..+++++.+++ +.+..++|+++|+|||++|||.++.+++.
T Consensus 494 msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~-~g~~~~l~~~~~~~-~~~~~~~~a~~G~RvL~~A~~~l~~~~~~ 571 (1028)
T 2zxe_A 494 QLSIHENEKSSESRYLLVMKGAPERILDRCSTILL-NGAEEPLKEDMKEA-FQNAYLELGGLGERVLGFCHFALPEDKYN 571 (1028)
T ss_dssp EEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECB-TTBCCBCCHHHHHH-HHHHHHHHHHTTCEEEEEEEEECCSTTSC
T ss_pred EEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhc-CCCcccCCHHHHHH-HHHHHHHHHhcCCEEEEEEEEecCccccc
Confidence 9999986 367899999999999999998653 67777888776665 46788999999999999999998764322
Q ss_pred hhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCc--
Q psy11770 312 INQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED-- 389 (668)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~-- 389 (668)
.+. .+ +.+..+..|+|++|+|+++++|++|++++++|++|+++||+++|+|||++.||.++|+++|+...++.
T Consensus 572 ~~~-~~----~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i 646 (1028)
T 2zxe_A 572 EGY-PF----DADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI 646 (1028)
T ss_dssp TTC-CC----CTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH
T ss_pred ccc-cc----chhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhH
Confidence 110 00 01112345789999999999999999999999999999999999999999999999999999754332
Q ss_pred --------------------eEEeehhhHHHhhhcCchhhhHHHHhhhcCCc--EEEEecCHhhHHHHHHHHHHhhcCCC
Q psy11770 390 --------------------YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL--RVLARSSPSDKYTLVKGMIDSKISAG 447 (668)
Q Consensus 390 --------------------~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~--~v~~r~~p~~K~~iv~~l~~~~~~~~ 447 (668)
..+++|.++... .++.+++...+. .+|+|++|+||..+|+.+++ .
T Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~--------~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~-----~ 713 (1028)
T 2zxe_A 647 EDIAARLNIPIGQVNPRDAKACVVHGSDLKDL--------STEVLDDILHYHTEIVFARTSPQQKLIIVEGCQR-----Q 713 (1028)
T ss_dssp HHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC--------CHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHH-----T
T ss_pred HHHHhhcCcchhhccccccceEEEEcHHhhhC--------CHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHh-----C
Confidence 245666665432 223333333333 49999999999999999743 4
Q ss_pred CCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 448 REVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVI 527 (668)
Q Consensus 448 ~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~ 527 (668)
++.|+|+|||.||+|||++||+|||||.+|++.+|++||+++.+++|+++.+++++||++|.|+++++.|.+++|+..++
T Consensus 714 g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~ 793 (1028)
T 2zxe_A 714 GAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEIT 793 (1028)
T ss_dssp TCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999977999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCC-CCCCHHHHHH-HHHHHHHHHHHHHHH
Q psy11770 528 VAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTK-ALISKTMMKN-IIGQAIYQLVIIFGI 605 (668)
Q Consensus 528 ~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~ 605 (668)
..+++.++..+.|++++|++|+|++++.+|++++++++|++++|+++|+++++ ++++++++.+ |+..+++++++.|+.
T Consensus 794 ~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~ 873 (1028)
T 2zxe_A 794 PFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFS 873 (1028)
T ss_dssp HHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999999999999999999999999999999987665 9999998877 556788888777665
Q ss_pred HHhhccccCC---------------CCCC-CCCCCCc---------ccchhhHHHHHHHHHHHHHHHHhhcccCCccccc
Q psy11770 606 LFFGDKLLDI---------------PTGR-GAEYGSL---------PTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE 660 (668)
Q Consensus 606 ~~~~~~~~~~---------------~~~~-~~~~~~~---------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~ 660 (668)
+++.....+. ..+. ...++.. ...++|++|+++|++|++|.++||+.+ .++|.
T Consensus 874 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~--~~~~~ 951 (1028)
T 2zxe_A 874 YFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRR--NSIFQ 951 (1028)
T ss_dssp HHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS--SCHHH
T ss_pred HHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCC--cchhc
Confidence 5432111111 0000 0000100 125789999999999999999999864 36776
Q ss_pred ccccCCCC
Q psy11770 661 GLFTTHSV 668 (668)
Q Consensus 661 ~~~~n~~~ 668 (668)
..++|++|
T Consensus 952 ~~~~n~~l 959 (1028)
T 2zxe_A 952 QGMKNKIL 959 (1028)
T ss_dssp HCSCCHHH
T ss_pred cCCcCHHH
Confidence 55888753
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-89 Score=817.81 Aligned_cols=630 Identities=30% Similarity=0.429 Sum_probs=487.0
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.++.++++.++||+|+++|+++..+.++.+++++++++++...+ . ....+.+| ...+...+..++++++++
T Consensus 235 ~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~----~~~~~~~~~~ai~l~v~a 307 (995)
T 3ar4_A 235 KIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF--N-DPVHGGSW----IRGAIYYFKIAVALAVAA 307 (995)
T ss_dssp HHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG--G-SCSSSSCH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c-cccccchH----HHHHHHHHHHHHHHHHHh
Confidence 4667778888899999999999999998877766655443221100 0 00112234 223345677899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEe---------cCC
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYK---------NIP 152 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~---------~~~ 152 (668)
||||||++++++++.+..+|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+. ...
T Consensus 308 iP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 387 (995)
T 3ar4_A 308 IPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITG 387 (995)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECC
T ss_pred cCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999987643211 010
Q ss_pred C-CCCC-------------CHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCC-Ch--H---
Q psy11770 153 K-YEDI-------------PEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGK-NY--Q--- 212 (668)
Q Consensus 153 ~-~~~~-------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~-~~--~--- 212 (668)
. .+.. ..+....+....+.|+.... . ....+..+...|||+|.|++.++.+.|. +. .
T Consensus 388 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~--~-~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~ 464 (995)
T 3ar4_A 388 STYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSL--D-FNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLS 464 (995)
T ss_dssp SSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEE--E-EETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSC
T ss_pred CCcCCccccccccccccccccHHHHHHHHHHHHcCCCcc--c-ccCCCCceeecCCccHHHHHHHHHHcCCccccccccc
Confidence 0 0000 11223445555666654321 0 0111223445699999999999988765 11 0
Q ss_pred ----------HHhhhCCccceeeeeccCCCCceEEEEEee-CC-----eEEEEEcCchHHHHhhcccccccCCccccCCH
Q psy11770 213 ----------TVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KN-----GYRVYTKGASEIILKKCSYIYGRNGHLEKFTK 276 (668)
Q Consensus 213 ----------~~~~~~~~~~~~~~~~F~s~rk~msvvv~~-~~-----~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~ 276 (668)
..+. .+..++++||+|+|||||++++. ++ ++.+|+|||||.|+++|+.+.. ++...++++
T Consensus 465 ~~~~~~~~~~~~~~---~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~ 540 (995)
T 3ar4_A 465 KVERANACNSVIRQ---LMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTG 540 (995)
T ss_dssp TTTSTTHHHHHHHH---HEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCH
T ss_pred cccccccchhhhhh---hCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhc-CCCcccCCH
Confidence 0111 24568899999999999999986 33 5899999999999999987654 345667887
Q ss_pred HHHHHHHHHHHHHH--hhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHH
Q psy11770 277 DMQGRLVRNVIEPM--ACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIK 354 (668)
Q Consensus 277 ~~~~~~~~~~~~~~--~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~ 354 (668)
+.+++ +.+.+++| +++|+|||++|||+++..+... . ..+....+.+|+|++|+|+++++|++|++++++|+
T Consensus 541 ~~~~~-~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~-----~-~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~ 613 (995)
T 3ar4_A 541 PVKEK-ILSVIKEWGTGRDTLRCLALATRDTPPKREEM-----V-LDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQ 613 (995)
T ss_dssp HHHHH-HHHHHHHHHHSTTCCEEEEEEEESSCCCGGGC-----C-TTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHH
T ss_pred HHHHH-HHHHHHHHHhhhccceEEEEEEEecCcccccc-----c-cccchhhhhhccCcEEEEEEeecCCCchhHHHHHH
Confidence 76665 45678889 9999999999999886432110 0 00111235678999999999999999999999999
Q ss_pred HHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCc--eEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhH
Q psy11770 355 KCQRAGITIRMVTGDNINTARSIATKCGIVKPGED--YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDK 432 (668)
Q Consensus 355 ~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~--~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K 432 (668)
.|+++||+++|+|||+..+|.++|+++|+...+.+ ..+++|.++... .++.+.+...+..+|+|++|+||
T Consensus 614 ~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l--------~~~~~~~~~~~~~v~~r~~P~~K 685 (995)
T 3ar4_A 614 LCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL--------PLAEQREACRRACCFARVEPSHK 685 (995)
T ss_dssp HHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTS--------CHHHHHHHHHHCCEEESCCSSHH
T ss_pred HHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhC--------CHHHHHHHHhhCcEEEEeCHHHH
Confidence 99999999999999999999999999999754332 136677776543 22334444456689999999999
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHH
Q psy11770 433 YTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIS 512 (668)
Q Consensus 433 ~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~ 512 (668)
.++|+.++ ..|+.|+|+|||.||+|||++||+||||| +|++.++++||+++.+++|.++.++++|||++|+|++
T Consensus 686 ~~~v~~l~-----~~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~ 759 (995)
T 3ar4_A 686 SKIVEYLQ-----SYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMK 759 (995)
T ss_dssp HHHHHHHH-----TTTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-----HCCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999974 45899999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHH
Q psy11770 513 KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNII 592 (668)
Q Consensus 513 ~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~ 592 (668)
+++.|.+++|+..++..+++.+++.+.|++++|++|+|+++|.+|+++++.++|++++|+++|+.+++++++++++++|+
T Consensus 760 k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~ 839 (995)
T 3ar4_A 760 QFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYM 839 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHH
Confidence 99999999999998888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc-cccC---CC--C--------CCCCCCC------CcccchhhHHHHHHHHHHHHHHHHhhcc
Q psy11770 593 GQAIYQLVIIFGILFFGD-KLLD---IP--T--------GRGAEYG------SLPTQHFTIIFNTFVLMTLFNEINARKI 652 (668)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~-~~~~---~~--~--------~~~~~~~------~~~~~~~t~~f~~~v~~~~~~~~~~r~~ 652 (668)
..+++++++.++.+++.. ...+ .. . +.+..+. .....++|++|+++|++|++|.|+||+.
T Consensus 840 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~ 919 (995)
T 3ar4_A 840 AIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSE 919 (995)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhcc
Confidence 999999877654332211 0000 00 0 0000010 0123578999999999999999999986
Q ss_pred cCCcccc-cccccCCCC
Q psy11770 653 HGQRNVF-EGLFTTHSV 668 (668)
Q Consensus 653 ~~~~~~~-~~~~~n~~~ 668 (668)
+. ++| .++++|+++
T Consensus 920 ~~--~~~~~~~~~n~~l 934 (995)
T 3ar4_A 920 NQ--SLMRMPPWVNIWL 934 (995)
T ss_dssp SC--CTTTSCGGGCHHH
T ss_pred cc--chhccCCccCHHH
Confidence 54 444 477888753
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-80 Score=721.28 Aligned_cols=543 Identities=20% Similarity=0.280 Sum_probs=414.2
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++++.+++|+|+.+++++..+..+++++++++++ . . ...+.+| ...+.+++++++++
T Consensus 271 ~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~---~----~--~~~~~~~--------~~~l~~av~llV~a 333 (920)
T 1mhs_A 271 RAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWV---S----S--FYRSNPI--------VQILEFTLAITIIG 333 (920)
T ss_dssp TTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---T----T--TTTTCCH--------HHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHH---H----H--HhcCCcH--------HHHHHHHHHHHHHh
Confidence 5677778888889999999999998877665544433221 1 1 1123334 56788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
||||||+++|++++.++.+|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+. . .+++
T Consensus 334 iP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-------~--~~~~- 403 (920)
T 1mhs_A 334 VPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-------V--DPED- 403 (920)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-------C--CCTH-
T ss_pred CchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-------C--CHHH-
Confidence 99999999999999999999999999999999999999999999999999999999988765321 0 1111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+....+.|+... ...++|+|.|+++++.+.+... ...+.+.+.+.+||+|.||||+++++
T Consensus 404 ---ll~~a~l~~~~~-------------~~~~~P~e~Al~~~~~~~~~~~----~~~~~~~~~~~~pF~s~~k~ms~iv~ 463 (920)
T 1mhs_A 404 ---LMLTACLAASRK-------------KKGIDAIDKAFLKSLKYYPRAK----SVLSKYKVLQFHPFDPVSKKVVAVVE 463 (920)
T ss_dssp ---HHHHHHHSCCCS-------------SCSCCSHHHHHHHHHHHSSSCC----GGGSCCCEEEEEEEETTTTEEEEEEC
T ss_pred ---HHHHHHHhcCCc-------------ccCCChHHHHHHHHHHhcccch----hhccccceeEEeeccCCCCeEEEEEE
Confidence 222333332210 0114899999999987765321 11223456788999999999999998
Q ss_pred e-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 242 K-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 242 ~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
. +++.++++|||||.++++|+. ..+++++.++. +.+.+++++++|+||+++||+..
T Consensus 464 ~~~g~~~~~~KGape~il~~c~~-------~~~~~~~~~~~-~~~~~~~~a~~G~RvL~vA~~~~--------------- 520 (920)
T 1mhs_A 464 SPQGERITCVKGAPLFVLKTVEE-------DHPIPEEVDQA-YKNKVAEFATRGFRSLGVARKRG--------------- 520 (920)
T ss_dssp CSSSSCEEEEEECHHHHHHHCCC-------SSCCCHHHHHH-HHHHHHHHHTSSCCCCEECCCSS---------------
T ss_pred eCCCcEEEEEeCCHHHHHHhccc-------cCCCCHHHHHH-HHHHHHHHHhCCCEEEEEEEecc---------------
Confidence 6 567788999999999999963 12355554444 45778999999999999998731
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--CceEEeehhhH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG--EDYLILEGKEF 398 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~--~~~i~~~g~~~ 398 (668)
|++++|+|+++++|++||+++++|+.|+++||+++|+|||++.||.++|+++||.... .+.+.++|.
T Consensus 521 ---------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~-- 589 (920)
T 1mhs_A 521 ---------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG-- 589 (920)
T ss_dssp ---------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--
T ss_pred ---------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--
Confidence 3578999999999999999999999999999999999999999999999999995321 111223332
Q ss_pred HHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCcc
Q psy11770 399 NRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGT 478 (668)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~ 478 (668)
..+.++.+.+...+..+|+|++|+||.++|+.+ |..|+.|+|+|||.||+|||++||+||||| +|+
T Consensus 590 --------~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~L-----q~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gt 655 (920)
T 1mhs_A 590 --------GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEIL-----QQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSS 655 (920)
T ss_dssp --------CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHH-----HTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSC
T ss_pred --------ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHH-----HhCCCeEEEEcCCcccHHHHHhCCcCcccc-ccc
Confidence 123445566677788899999999999999997 445899999999999999999999999999 899
Q ss_pred HHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHH
Q psy11770 479 DVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLAS 558 (668)
Q Consensus 479 ~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~ 558 (668)
+.+|++||+++.+++|+++.+++++||++|+|+++++.|.++.|+....+..+...+. +.|+++.|++|+|++.+. |+
T Consensus 656 d~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~-~~~l~~~~il~~~l~~d~-~~ 733 (920)
T 1mhs_A 656 DAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAIL-NRSLNIELVVFIAIFADV-AT 733 (920)
T ss_dssp HHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-SCCCCHHHHHHHHHHHTT-HH
T ss_pred HHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHH-Hh
Confidence 9999999999999999999999999999999999999999999997644333222222 334889999999999997 89
Q ss_pred HHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHH
Q psy11770 559 LALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTF 638 (668)
Q Consensus 559 l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~ 638 (668)
++++.++++++ ++|++++.+ .++..++..+++.++..++.+++... ++...+ ........+|++|.++
T Consensus 734 lal~~e~~~~~---~~P~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~T~~f~~l 801 (920)
T 1mhs_A 734 LAIAYDNAPYS---QTPVKWNLP----KLWGMSVLLGVVLAVGTWITVTTMYA-QGENGG----IVQNFGNMDEVLFLQI 801 (920)
T ss_dssp HHCCCCCSGGG---GSCCCCCSS----SCSSCHHHHHHHHHHHHHHHHHHHTT-TTTTCC----SSSSSSSHHHHHHHHH
T ss_pred hhhcccCcccc---cCCCCchHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-hccccc----ccchhhHHHHHHHHHH
Confidence 99999988765 566554432 22223344555555544433322211 111111 0011235789999999
Q ss_pred HHHHHHHHHHhhccc
Q psy11770 639 VLMTLFNEINARKIH 653 (668)
Q Consensus 639 v~~~~~~~~~~r~~~ 653 (668)
+++|+++.+++|+.+
T Consensus 802 v~~~~~~~~~~R~~~ 816 (920)
T 1mhs_A 802 SLTENWLIFITRANG 816 (920)
T ss_dssp HHHHHHHTTSSSCSS
T ss_pred HHHHHHHHHHhccch
Confidence 999999999999854
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-77 Score=695.54 Aligned_cols=551 Identities=19% Similarity=0.306 Sum_probs=394.0
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGY-AGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVV 80 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~ 80 (668)
|+.+..++ +.++||+|+.+++++.++.. +++.++++++ .. +...+.+| ...+..+++++++
T Consensus 222 ~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~--------~~~~~~~v~llv~ 283 (885)
T 3b8c_A 222 KAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEII-------VM--YPIQRRKY--------RDGIDNLLVLLIG 283 (885)
T ss_dssp TCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHST-------TT--TTTTCSCS--------TTHHHHHHHHTTT
T ss_pred HHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHH-------HH--HHHccCcH--------HHHHHHHHHHHHH
Confidence 45555555 56789999999999876322 2221111111 11 11122344 3467789999999
Q ss_pred hccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHH
Q psy11770 81 AVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPED 160 (668)
Q Consensus 81 ~iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~ 160 (668)
+||||||++++++++.++.+|+|+|++||+++++|+||++|+||||||||||+|+|+|.+.++. ... ...++
T Consensus 284 aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~-----~~~--~~~~~- 355 (885)
T 3b8c_A 284 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE-----VFC--KGVEK- 355 (885)
T ss_dssp TCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC-----SSC--SSTTH-
T ss_pred HhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe-----ccC--CCCCH-
Confidence 9999999999999999999999999999999999999999999999999999999999643210 000 01112
Q ss_pred HHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEE
Q psy11770 161 IASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVI 240 (668)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv 240 (668)
+.+....++|+.. ..++|+|.|+++++.+. ...+ ..+..++.+||+|.||||++++
T Consensus 356 --~~ll~~aa~~~~~---------------~~~~p~~~Al~~~~~~~----~~~~---~~~~~~~~~pF~s~~k~~sv~~ 411 (885)
T 3b8c_A 356 --DQVLLFAAMASRV---------------ENQDAIDAAMVGMLADP----KEAR---AGIREVHFLPFNPVDKRTALTY 411 (885)
T ss_dssp --HHHHHHHHHHCCS---------------SSCCSHHHHHHHTTCCT----TCCC---CSSCCBCCCCCCTTTCCCCCBB
T ss_pred --HHHHHHHHHHhCC---------------CCCCchHHHHHHHhhch----hhHh---hcCceeecccCCcccceEEEEE
Confidence 1223333333321 13689999999876421 1111 1234567899999999999998
Q ss_pred ee-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCC
Q psy11770 241 PK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEG 319 (668)
Q Consensus 241 ~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~ 319 (668)
+. ++++++++|||||.++++|+.. .. ..+ .+.+.+++++++|+||+++|+++++.++
T Consensus 412 ~~~~g~~~~~~KGa~e~il~~c~~~----~~---~~~-----~~~~~~~~~a~~G~rvl~vA~~~~~~~~---------- 469 (885)
T 3b8c_A 412 IDGSGNWHRVSKGAPEQILELAKAS----ND---LSK-----KVLSIIDKYAERGLRSLAVARQVVPEKT---------- 469 (885)
T ss_dssp CSSSSCBCBCCCCSGGGTSSSSCCC----ST---TTT-----THHHHHHHHTTTTCEEEEECCBCCCSSS----------
T ss_pred EecCCcEEEEEeCCHHHHHHhccCc----hh---hHH-----HHHHHHHHHHhCCCeEEEEEEecccccc----------
Confidence 76 6777889999999999999631 10 011 1346678899999999999999875421
Q ss_pred CCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHH
Q psy11770 320 DPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN 399 (668)
Q Consensus 320 ~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~ 399 (668)
.+..|+|++|+|+++++||+||+++++|++|+++||+++|+|||+..||.++|+++|+..+....-.+.|.+++
T Consensus 470 ------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~ 543 (885)
T 3b8c_A 470 ------KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKD 543 (885)
T ss_dssp ------SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGG
T ss_pred ------ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccc
Confidence 13456899999999999999999999999999999999999999999999999999995321000123454443
Q ss_pred HhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccH
Q psy11770 400 RRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD 479 (668)
Q Consensus 400 ~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~ 479 (668)
.. .....+++...+..+|+|++|+||.++|+.+++ .|+.|+|+|||.||+|||++||+||||| +|++
T Consensus 544 ~~-------~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~-----~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd 610 (885)
T 3b8c_A 544 AN-------LASIPVEELIEKADGFAGVFPEHKYEIVKKLQE-----RKHIVGMTGDGVNDAPALKKADIGIAVA-DATD 610 (885)
T ss_dssp TT-------SCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHH-----TTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHH
T ss_pred cc-------cchhHHHHHHhhCcEEEEECHHHHHHHHHHHHH-----CCCeEEEEcCCchhHHHHHhCCEeEEeC-CccH
Confidence 21 112223444456679999999999999999853 4789999999999999999999999999 8999
Q ss_pred HHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHH
Q psy11770 480 VAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASL 559 (668)
Q Consensus 480 ~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l 559 (668)
.++++||+++.+++|+++.+++++||++|+|+++++.|.+++|+..++..+.. ....+.|++|+|++|+|++.+..+ +
T Consensus 611 ~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~-~~~~~~~l~p~~il~i~l~~d~~~-l 688 (885)
T 3b8c_A 611 AARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI-ALIWEFDFSAFMVLIIAILNDGTI-M 688 (885)
T ss_dssp HHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHH-HSSCSSCSCHHHHHHHHHHHHTTT-C
T ss_pred HHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCcCcCHHHHHHHHHHHHHHH-H
Confidence 99999999999999999999999999999999999999999998755444333 335567899999999999999875 7
Q ss_pred HhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCC-CCCcccchhh-HHHHH
Q psy11770 560 ALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAE-YGSLPTQHFT-IIFNT 637 (668)
Q Consensus 560 ~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t-~~f~~ 637 (668)
+++.+++.+ |+.++...+ +..+..++..+++++++.+++++++......+...+.+ ........+| +.|.+
T Consensus 689 ~l~~~~~~~------~~~p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 761 (885)
T 3b8c_A 689 TISKDRVKP------SPTPDSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQV 761 (885)
T ss_dssp CCCCCCCCC------SSCCCSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTT
T ss_pred hhcccccCc------ccCCcchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHH
Confidence 888777644 222222222 44455566677777666554433321100000000000 0000122334 45557
Q ss_pred HHHHHHHHHHHhhccc
Q psy11770 638 FVLMTLFNEINARKIH 653 (668)
Q Consensus 638 ~v~~~~~~~~~~r~~~ 653 (668)
++++|+ +.|++|+.+
T Consensus 762 ~~~~~~-~~~~~Rs~~ 776 (885)
T 3b8c_A 762 SIISQA-LIFVTRSRS 776 (885)
T ss_dssp SSTTGG-GTTCSSSCT
T ss_pred HHHHHH-HHHHhccCC
Confidence 778886 899999864
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-57 Score=515.45 Aligned_cols=381 Identities=26% Similarity=0.346 Sum_probs=313.7
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|++++.++++.+++|+|+.+|+++.++.+++++++++++++|..+ . ....| ...+..++++++++
T Consensus 317 ~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~---~----~~~~~--------~~~l~~ai~vlvia 381 (736)
T 3rfu_A 317 RIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALL---G----PQPAL--------SYGLIAAVSVLIIA 381 (736)
T ss_dssp HHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---C----SSSST--------THHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---C----CCchH--------HHHHHHHHHhHHHh
Confidence 466777888889999999999999999999888888777664431 1 11124 45788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||+++|+++..+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+. +++.
T Consensus 382 cPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~-----------~~~~ 450 (736)
T 3rfu_A 382 CPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDF-----------VEDN 450 (736)
T ss_dssp CCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSS-----------CHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCC-----------CHHH
Confidence 99999999999999999999999999999999999999999999999999999999999984321 2221
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
...+..++ . ...++|.+.|+++++.+.|... ....+|++.+++... ..
T Consensus 451 ~l~~aa~l--e-----------------~~s~hPla~Aiv~~a~~~~~~~------------~~~~~f~~~~g~gv~-~~ 498 (736)
T 3rfu_A 451 ALALAAAL--E-----------------HQSEHPLANAIVHAAKEKGLSL------------GSVEAFEAPTGKGVV-GQ 498 (736)
T ss_dssp HHHHHHHH--H-----------------HSSCCHHHHHHHHHHHTTCCCC------------CCCSCCCCCTTTEEE-EC
T ss_pred HHHHHHHH--h-----------------hcCCChHHHHHHHHHHhcCCCc------------cCcccccccCCceEE-EE
Confidence 11122211 1 1234799999999987655431 233467777765432 22
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
.+++. +.+|+++.+.+.+.. .++ ..+..++++++|+|++++|+
T Consensus 499 ~~g~~--~~~G~~~~~~~~~~~-----------~~~-----~~~~~~~~~~~G~~vl~va~------------------- 541 (736)
T 3rfu_A 499 VDGHH--VAIGNARLMQEHGGD-----------NAP-----LFEKADELRGKGASVMFMAV------------------- 541 (736)
T ss_dssp SSSSC--EEEESHHHHHHHCCC-----------CHH-----HHHHHHHHHHTTCEEEEEEE-------------------
T ss_pred ECCEE--EEEcCHHHHHHcCCC-----------hhH-----HHHHHHHHHhcCCeEEEEEE-------------------
Confidence 23432 456999887654321 011 23557889999999999995
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|.+++|+++++|++|++++++|++|+++|++++|+|||+..+|..+|+++|+.
T Consensus 542 ----------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~----------------- 594 (736)
T 3rfu_A 542 ----------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK----------------- 594 (736)
T ss_dssp ----------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC-----------------
T ss_pred ----------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC-----------------
Confidence 34899999999999999999999999999999999999999999999999993
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.++++++|++|.++++.+++ .++.|+|+|||.||+|||+.||+||||| +|++.+
T Consensus 595 --------------------~v~a~~~P~~K~~~v~~l~~-----~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a 648 (736)
T 3rfu_A 595 --------------------KVVAEIMPEDKSRIVSELKD-----KGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVA 648 (736)
T ss_dssp --------------------CEECSCCHHHHHHHHHHHHH-----HSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHH
T ss_pred --------------------EEEEecCHHHHHHHHHHHHh-----cCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHH
Confidence 37899999999999999754 5788999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF 530 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 530 (668)
+++||+++.+++++++.+++++||++++|+++++.|.+.+|++.+.++.
T Consensus 649 ~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 649 IESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp HHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999887764
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-54 Score=499.17 Aligned_cols=378 Identities=25% Similarity=0.305 Sum_probs=303.2
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|++++.++++.+++|+|+.+|+++.++.++++++++++++.+. ...+.+| ...+..++++++++
T Consensus 302 ~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~--------~~~~~~~--------~~~~~~~i~vlvia 365 (723)
T 3j09_A 302 QIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWY--------FIAHAPL--------LFAFTTLIAVLVVA 365 (723)
T ss_dssp HHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--------SSTTCTT--------CCSHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhcCCcH--------HHHHHHHHHHHHhh
Confidence 5677788889999999999999999988887777766544321 1122333 34677889999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||+++++++..+..+++++|++||+++++|+||++|+||||||||||+|+|+|.+++..+. +++
T Consensus 366 ~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~-----------~~~- 433 (723)
T 3j09_A 366 CPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-----------DER- 433 (723)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSS-----------CHH-
T ss_pred hhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCC-----------CHH-
Confidence 99999999999999999999999999999999999999999999999999999999999987531 111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+..+..+. ....+|.+.|+++++.+.|...... -+|++...+ .+..
T Consensus 434 -~~l~~aa~~e-----------------~~s~hP~~~Ai~~~a~~~~~~~~~~------------~~~~~~~g~-g~~~- 481 (723)
T 3j09_A 434 -ELLRLAAIAE-----------------RRSEHPIAEAIVKKALEHGIELGEP------------EKVEVIAGE-GVVA- 481 (723)
T ss_dssp -HHHHHHHHHH-----------------TTCCSHHHHHHHHHHHHTTCCCCSC------------CCCEEETTT-EEEE-
T ss_pred -HHHHHHHHHh-----------------ccCCCchhHHHHHHHHhcCCCcCCc------------cceEEecCC-ceEE-
Confidence 1111111111 1224799999999998776542110 011111110 0000
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
..+.+|+++.+.+... +..++ ..+..++++++|+|++++|+
T Consensus 482 -----~~~~~g~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~g~~~~~va~------------------- 522 (723)
T 3j09_A 482 -----DGILVGNKRLMEDFGV----------AVSNE-----VELALEKLEREAKTAVIVAR------------------- 522 (723)
T ss_dssp -----TTEEEECHHHHHHTTC----------CCCHH-----HHHHHHHHHTTTCEEEEEEE-------------------
T ss_pred -----EEEEECCHHHHHhcCC----------CccHH-----HHHHHHHHHhcCCeEEEEEE-------------------
Confidence 1245688876654321 11111 34567889999999999985
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|++++|+++++|++||+++++|+.|+++|++++|+|||+..+|..+|+++|+.
T Consensus 523 ----------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----------------- 575 (723)
T 3j09_A 523 ----------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------- 575 (723)
T ss_dssp ----------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------
T ss_pred ----------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc-----------------
Confidence 45899999999999999999999999999999999999999999999999993
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.++++++|++|.++++.+ +.. +.|+|+|||.||+|||+.||+||||| +|++.+
T Consensus 576 --------------------~~~~~~~P~~K~~~v~~l-----~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a 628 (723)
T 3j09_A 576 --------------------LVIAEVLPHQKSEEVKKL-----QAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVA 628 (723)
T ss_dssp --------------------EEECSCCTTCHHHHHHHH-----TTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCS
T ss_pred --------------------EEEccCCHHHHHHHHHHH-----hcC-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHH
Confidence 589999999999999997 334 78999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
+++||+++.+++++++.+++++||++++|+++++.|.+++|++.+.+++.+
T Consensus 629 ~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~ 679 (723)
T 3j09_A 629 VESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGL 679 (723)
T ss_dssp SCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999987776544
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-55 Score=493.20 Aligned_cols=378 Identities=25% Similarity=0.310 Sum_probs=302.2
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.++.++++.+++|+|+.+|+++.++.++++++++++++.+. ...+.+| ...+..++++++++
T Consensus 224 ~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~--------~~~~~~~--------~~~~~~~i~vlvia 287 (645)
T 3j08_A 224 QIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWY--------FIAHAPL--------LFAFTTLIAVLVVA 287 (645)
T ss_dssp HHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSS--------CCCSCSC--------CCTTTTTHHHHHHH
T ss_pred HHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhcCCcH--------HHHHHHHHHHHHHH
Confidence 5667788889999999999999999988887777766544321 1122233 23567788999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||+++|+++..+..+++++|++||+++++|+||++|+||||||||||+|+|+|.+++..+. +++
T Consensus 288 ~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~-----------~~~- 355 (645)
T 3j08_A 288 CPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-----------DER- 355 (645)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSS-----------CHH-
T ss_pred hhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCC-----------CHH-
Confidence 99999999999999999999999999999999999999999999999999999999999987531 111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+ +......+. ....+|.+.|+++++.+.|...... -+|++...+- +..
T Consensus 356 -~-~l~~aa~~e----------------~~s~hPla~Aiv~~a~~~g~~~~~~------------~~~~~~~g~g-~~~- 403 (645)
T 3j08_A 356 -E-LLRLAAIAE----------------RRSEHPIAEAIVKKALEHGIELGEP------------EKVEVIAGEG-VVA- 403 (645)
T ss_dssp -H-HHHHHHHHH----------------TTCCSHHHHHHHHHHHHTTCCCCSC------------CCCEEETTTE-EEE-
T ss_pred -H-HHHHHHHHh----------------hcCCChhHHHHHHHHHhcCCCcCCc------------cceEEecCCc-eEE-
Confidence 1 111111111 1224799999999998776542110 0111111110 000
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
..+.+|+++.+.+... ...++ ..+..++++++|+|++++|+
T Consensus 404 -----~~v~~g~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~g~~~l~va~------------------- 444 (645)
T 3j08_A 404 -----DGILVGNKRLMEDFGV----------AVSNE-----VELALEKLEREAKTAVIVAR------------------- 444 (645)
T ss_dssp -----TTEEEECHHHHHHTTC----------CCCHH-----HHHHHHHHHTTTCCCEEEEE-------------------
T ss_pred -----EEEEECCHHHHHhcCC----------CccHH-----HHHHHHHHHhcCCeEEEEEE-------------------
Confidence 1245688776654321 11121 34567889999999999985
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|++++|+++++|+++|+++++|++|+++|++++|+|||+..+|..+++++|+.
T Consensus 445 ----------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----------------- 497 (645)
T 3j08_A 445 ----------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------- 497 (645)
T ss_dssp ----------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------
T ss_pred ----------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-----------------
Confidence 35899999999999999999999999999999999999999999999999993
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.++++++|++|.++++.+ +.. +.|+|+|||.||+|||+.||+||||| +|++.+
T Consensus 498 --------------------~~~~~~~P~~K~~~v~~l-----~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a 550 (645)
T 3j08_A 498 --------------------LVIAEVLPHQKSEEVKKL-----QAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVA 550 (645)
T ss_dssp --------------------EEECSCCTTCHHHHHHHH-----TTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCS
T ss_pred --------------------EEEEeCCHHhHHHHHHHH-----hhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHH
Confidence 589999999999999997 334 78999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
+++||+++.+++++++.+++++||++++|+++++.|.+++|++.+.+.+.+
T Consensus 551 ~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~ 601 (645)
T 3j08_A 551 VESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGL 601 (645)
T ss_dssp SCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999977766533
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.8e-31 Score=265.92 Aligned_cols=138 Identities=26% Similarity=0.485 Sum_probs=126.1
Q ss_pred EEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHH
Q psy11770 334 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL 413 (668)
Q Consensus 334 ~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~ 413 (668)
.+.|.+.+.|+++|++.++|+.|++.|++++|+||++..++..+++++|+.
T Consensus 126 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~----------------------------- 176 (263)
T 2yj3_A 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ----------------------------- 176 (263)
Confidence 678999999999999999999999999999999999999999999999983
Q ss_pred HhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCC
Q psy11770 414 LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 493 (668)
Q Consensus 414 l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~ 493 (668)
.+|....|++|..+++.+ +..++.|+|||||.||++|++.||+|+++| ++.+.+++.||+++.+++
T Consensus 177 --------~~f~~~~p~~k~~~~~~l-----~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~ 242 (263)
T 2yj3_A 177 --------EYYSNLSPEDKVRIIEKL-----KQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSND 242 (263)
Confidence 245556699999988875 666789999999999999999999999999 888889999999998789
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q psy11770 494 FSSIVKAVMWGRNVYDSISKF 514 (668)
Q Consensus 494 ~~~i~~~l~~gR~~~~~i~~~ 514 (668)
+..+.+++..+|+++++++++
T Consensus 243 l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 243 IGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=230.27 Aligned_cols=279 Identities=25% Similarity=0.353 Sum_probs=197.3
Q ss_pred HHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHHHHHHHHHHhhcCCCC
Q psy11770 97 SVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYT 176 (668)
Q Consensus 97 ~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (668)
|.++++|+|+++|+++++|+++++++||||||||||.+.+.+.+++..+. ..++..+ +..++ .
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~~~~~l~-~~~~~--e---- 71 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------DERELLR-LAAIA--E---- 71 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------CHHHHHH-HHHHH--T----
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------CHHHHHH-HHHHH--h----
Confidence 67899999999999999999999999999999999999999998876431 1112211 11111 1
Q ss_pred cccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEeeCCeEEEEEcCchHH
Q psy11770 177 SKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEI 256 (668)
Q Consensus 177 ~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~~~~~~~~~KGa~e~ 256 (668)
....+|...|+..++.+.|...... .....++ .+.+.. ..+.+|.++.
T Consensus 72 -------------~~s~hp~~~a~~~~~~~~g~~~~~~-------~~~~~~~----G~~~~~--------~~~~~g~~~~ 119 (287)
T 3a1c_A 72 -------------RRSEHPIAEAIVKKALEHGIELGEP-------EKVEVIA----GEGVVA--------DGILVGNKRL 119 (287)
T ss_dssp -------------TTCCSHHHHHHHHHHHHTTCCCCCC-------SCEEEET----TTEEEE--------TTEEEECHHH
T ss_pred -------------hcCCCHHHHHHHHHHHhcCCCcccc-------ccceeec----CCCeEE--------EEEEECCHHH
Confidence 1235799999999888776531100 0011110 000000 1133465554
Q ss_pred HHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEE
Q psy11770 257 ILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCL 336 (668)
Q Consensus 257 il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~l 336 (668)
+.+.+. +++++ ..+..+.+..+|.+++++++. ..++
T Consensus 120 ~~~~~~----------~~~~~-----~~~~~~~~~~~g~~~i~~~~d-----------------------------~~~~ 155 (287)
T 3a1c_A 120 MEDFGV----------AVSNE-----VELALEKLEREAKTAVIVARN-----------------------------GRVE 155 (287)
T ss_dssp HHHTTC----------CCCHH-----HHHHHHHHHHTTCEEEEEEET-----------------------------TEEE
T ss_pred HHhcCC----------CccHH-----HHHHHHHHHhCCCeEEEEEEC-----------------------------CEEE
Confidence 432211 11111 234456788899999999852 2788
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhh
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDK 416 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~ 416 (668)
+.+..+++++|++.++|+.|+++|+++.++||++...+..+++.+|+.
T Consensus 156 ~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~-------------------------------- 203 (287)
T 3a1c_A 156 GIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-------------------------------- 203 (287)
T ss_dssp EEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--------------------------------
T ss_pred EEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc--------------------------------
Confidence 888889999999999999999999999999999999999999999983
Q ss_pred hcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH
Q psy11770 417 VWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS 496 (668)
Q Consensus 417 ~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~ 496 (668)
..|....|..|...++.+ +.. +.++|+||+.||++|.+.||++++++ ++.+..+..+|+++.++++..
T Consensus 204 -----~~f~~i~~~~K~~~~~~l-----~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~ 271 (287)
T 3a1c_A 204 -----LVIAEVLPHQKSEEVKKL-----QAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRD 271 (287)
T ss_dssp -----EEECSCCTTCHHHHHHHH-----TTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHH
T ss_pred -----eeeeecChHHHHHHHHHH-----hcC-CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHH
Confidence 245556688998888875 555 88999999999999999999999998 776666778999997779999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11770 497 IVKAVMWGRNVYDSIS 512 (668)
Q Consensus 497 i~~~l~~gR~~~~~i~ 512 (668)
+.+++..+|.++++|+
T Consensus 272 l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 272 VVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHHHTTC-------
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999998875
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=212.80 Aligned_cols=276 Identities=28% Similarity=0.350 Sum_probs=189.2
Q ss_pred ccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHHHHHHHHHHhhcCCCCcccccCCCCCC
Q psy11770 108 VRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANE 187 (668)
Q Consensus 108 v~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (668)
+|+++++|.+++++.|||||+||||.|+|+|.++...+. ..+....+...+...
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~-----------~~~~~~~~~~~~~~~--------------- 54 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH-----------SEDELLQIAASLEAR--------------- 54 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-----------CHHHHHHHHHHHHTT---------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-----------CHHHHHHHHHHhhcc---------------
Confidence 588999999999999999999999999999999876432 122222222222111
Q ss_pred CcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEeeCCeEEEEEcCchHHHHhhccccccc
Q psy11770 188 LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGR 267 (668)
Q Consensus 188 ~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~~~~~~~~~KGa~e~il~~c~~~~~~ 267 (668)
...+...++.+.+...|..... ......++ .+.+...+ ++.. +..|.++.+.......
T Consensus 55 ----s~~~~~~a~~~~~~~~g~~~~~-------~~~~~~~~----g~~~~~~~--~~~~--~~~~~~~~~~~~~~~~--- 112 (280)
T 3skx_A 55 ----SEHPIAAAIVEEAEKRGFGLTE-------VEEFRAIP----GKGVEGIV--NGRR--YMVVSPGYIRELGIKT--- 112 (280)
T ss_dssp ----CCSHHHHHHHHHHHHTTCCCCC-------CEEEEEET----TTEEEEEE--TTEE--EEEECHHHHHHTTCCC---
T ss_pred ----CCCHHHHHHHHHHHhcCCCCCC-------ccceeecC----CCEEEEEE--CCEE--EEEecHHHHHHcCCCc---
Confidence 1235667777777766543210 01111111 11111111 2222 2336666554433210
Q ss_pred CCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCC
Q psy11770 268 NGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRP 347 (668)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~ 347 (668)
. ...+.+..++.+++.+++ +..++|.+.+.++++|
T Consensus 113 -------~---------~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~ 147 (280)
T 3skx_A 113 -------D---------ESVEKLKQQGKTVVFILK-----------------------------NGEVSGVIALADRIRP 147 (280)
T ss_dssp -------C---------TTHHHHHTTTCEEEEEEE-----------------------------TTEEEEEEEEEEEECT
T ss_pred -------h---------HHHHHHHhCCCeEEEEEE-----------------------------CCEEEEEEEecCCCCH
Confidence 0 123456677888877664 2378899999999999
Q ss_pred chHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEec
Q psy11770 348 EVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARS 427 (668)
Q Consensus 348 ~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~ 427 (668)
++.++++.|++.|+++.++||++...+..+++++|+. ..|..+
T Consensus 148 ~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------------------~~f~~~ 190 (280)
T 3skx_A 148 ESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD-------------------------------------DYFAEV 190 (280)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------------EEECSC
T ss_pred hHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh-------------------------------------hHhHhc
Confidence 9999999999999999999999999999999999983 356677
Q ss_pred CHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHH
Q psy11770 428 SPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNV 507 (668)
Q Consensus 428 ~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~ 507 (668)
.|.+|...++.+.+ ...++|+||+.||++|++.||+||+|| ++.+..++.||+++..++++++.+++..+|++
T Consensus 191 ~~~~k~~~~k~~~~------~~~~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~ 263 (280)
T 3skx_A 191 LPHEKAEKVKEVQQ------KYVTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKT 263 (280)
T ss_dssp CGGGHHHHHHHHHT------TSCEEEEECTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHh------cCCEEEEeCCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHH
Confidence 88999999988643 226799999999999999999999999 89998999999999888999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy11770 508 YDSISKFLQFQLT 520 (668)
Q Consensus 508 ~~~i~~~i~~~l~ 520 (668)
+.++++++.|++.
T Consensus 264 ~~~~~~n~~~~~~ 276 (280)
T 3skx_A 264 YSKFHGLSAWSHP 276 (280)
T ss_dssp CC-----------
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=175.14 Aligned_cols=133 Identities=21% Similarity=0.259 Sum_probs=105.2
Q ss_pred ccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEee-CCeEEEEEcCchHHHHhhcccccccCCc
Q psy11770 192 VGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGH 270 (668)
Q Consensus 192 ~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~ 270 (668)
.+||+|.|+++++...+ ....+.. +..+.++||+|+||||+++++. ++++++++|||||+|+++|+.+.. +|.
T Consensus 32 ~~n~~d~Ail~~~~~~~--~~~~~~~---~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~-~g~ 105 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES--ARSLASR---WQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRH-NGE 105 (170)
T ss_dssp CCCHHHHHHHHTSCHHH--HHHHHHH---SEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEE-TTE
T ss_pred CCChHHHHHHHHHHhcC--hhhhhhc---CeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhc-CCC
Confidence 36899999998865422 2223333 3457899999999999999987 567899999999999999998764 788
Q ss_pred cccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCC
Q psy11770 271 LEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDP 344 (668)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 344 (668)
..+++++.++++ .+.+++|+++|+|||++|||.++.++. .. ..+.|+||+|+|++|+-|.
T Consensus 106 ~~~l~~~~~~~i-~~~~~~la~~GlRvLavA~k~~~~~~~-----------~~--~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 106 IVPLDDIMLRKI-KRVTDTLNRQGLRVVAVATKYLPAREG-----------DY--QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp EEECCHHHHHHH-HHHHHHHHHTTCEEEEEEEEEEECCSS-----------CC--CGGGSCSEEEEEEEEEEC-
T ss_pred cccCCHHHHHHH-HHHHHHHHhCCCEEEEEEEEECCCCcc-----------cc--CccccCCcEEEehhccccc
Confidence 889998877764 678999999999999999999875421 01 1235899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-16 Score=164.44 Aligned_cols=145 Identities=12% Similarity=0.136 Sum_probs=109.8
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHh-hh-cC
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLD-KV-WP 419 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~-~~-~~ 419 (668)
.++++|++.++++.|+++|+++.|+||+...++.++++++|+..++..+. .+.-.+.. +.+. .. .+
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~-~n~l~~~~-----------~~~~~~~~~~ 206 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVV-SNFMDFDE-----------NGVLKGFKGE 206 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEE-EECEEECT-----------TSBEEEECSS
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEE-eeeEEEcc-----------cceeEecccc
Confidence 47899999999999999999999999999999999999999965432221 11111100 0000 00 01
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHh---hCCccEeeCC------CccHHHHHhcchhcc
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALK---KADVGFAMGI------TGTDVAKEASDIILT 490 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk---~A~vGIam~~------~~~~~ak~~ad~vl~ 490 (668)
....+++..|.+|...+..+ +..++.|+|+|||.||+||++ .||+||+||. ++.+.+++++|+|+.
T Consensus 207 ~i~~~~k~~~~~k~~~~~~~-----~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~ 281 (297)
T 4fe3_A 207 LIHVFNKHDGALKNTDYFSQ-----LKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 281 (297)
T ss_dssp CCCTTCHHHHHHTCHHHHHH-----TTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEE
T ss_pred ccchhhcccHHHHHHHHHHh-----hccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEE
Confidence 12345666777887777664 567889999999999999955 8999999995 577888999999999
Q ss_pred cCCchHHHHHHHH
Q psy11770 491 DDNFSSIVKAVMW 503 (668)
Q Consensus 491 ~~~~~~i~~~l~~ 503 (668)
+|++..++.+|.+
T Consensus 282 ~d~~~~v~~~il~ 294 (297)
T 4fe3_A 282 KEESLEVVNSILQ 294 (297)
T ss_dssp TCCBCHHHHHHHH
T ss_pred CCCChHHHHHHHH
Confidence 9999999988753
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.51 E-value=2.3e-14 Score=137.29 Aligned_cols=130 Identities=17% Similarity=0.283 Sum_probs=110.1
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhh
Q psy11770 352 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 431 (668)
Q Consensus 352 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~ 431 (668)
+|+.|+++|+++.++||++...+..+++++|+. .+|... .+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~-------------------------------------~~f~~~--~~ 94 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE-------------------------------------HLFQGR--ED 94 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS-------------------------------------EEECSC--SC
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH-------------------------------------HHhcCc--CC
Confidence 999999999999999999999999999999983 122222 67
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCC----chHHHHHHHHHHHH
Q psy11770 432 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN----FSSIVKAVMWGRNV 507 (668)
Q Consensus 432 K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~----~~~i~~~l~~gR~~ 507 (668)
|...++.+.++ ++..++.++++||+.||++|++.||+|++++ ++.+.+++.||+++.+++ +..+.+.+..+|..
T Consensus 95 K~~~~~~~~~~-~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~ 172 (189)
T 3mn1_A 95 KLVVLDKLLAE-LQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGN 172 (189)
T ss_dssp HHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHH-cCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCc
Confidence 77888877655 5778899999999999999999999999999 899999999999998765 45566777889999
Q ss_pred HHHHHHHHHHHHHHH
Q psy11770 508 YDSISKFLQFQLTVN 522 (668)
Q Consensus 508 ~~~i~~~i~~~l~~n 522 (668)
+.++++++.|.+.+|
T Consensus 173 ~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 173 LEAAHSVYLEGHHHH 187 (189)
T ss_dssp HHHHHHTTSTTC---
T ss_pred HHHHHHHHhcccccc
Confidence 999999999988776
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.47 E-value=3.2e-13 Score=133.25 Aligned_cols=156 Identities=16% Similarity=0.168 Sum_probs=113.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh---hh-cCch----------
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR---VR-DNNG---------- 407 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~---~~-~~~~---------- 407 (668)
+.++.+++.++|++|+++|++++++|||+...+..+++++|+.. .++..+|..+... .. ....
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~ 96 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEM 96 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC---eEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999842 2444444332110 00 0000
Q ss_pred ------------------------hhhHHHHh---hhcCCcEEE-----EecCH--hhHHHHHHHHHHhhcCCCCCEEEE
Q psy11770 408 ------------------------EVQQNLLD---KVWPRLRVL-----ARSSP--SDKYTLVKGMIDSKISAGREVVAV 453 (668)
Q Consensus 408 ------------------------~~~~~~l~---~~~~~~~v~-----~r~~p--~~K~~iv~~l~~~~~~~~~~~v~~ 453 (668)
....+.++ +.+ .+.+. ....| .+|...++.+++. ++...+.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~-~~~~~~~~~~ 174 (227)
T 1l6r_A 97 SKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKLKEM-YSLEYDEILV 174 (227)
T ss_dssp TTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHHHHH-TTCCGGGEEE
T ss_pred HHHhcCCccccccceecccceEEecCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHHHHH-hCcCHHHEEE
Confidence 00011111 111 22222 12224 6899999988765 5777788999
Q ss_pred EcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 454 TGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 454 iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+||+.||.+|++.|++|++|+ ++.+.+++.||+++.+++.+++.++|++
T Consensus 175 iGD~~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 175 IGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp ECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred ECCcHHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 999999999999999999999 9999999999999999899999998864
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-12 Score=133.78 Aligned_cols=159 Identities=23% Similarity=0.300 Sum_probs=113.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH----------------------HH
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF----------------------NR 400 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~----------------------~~ 400 (668)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+......++..+|..+ ..
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 35789999999999999999999999999999999999997321122222222110 00
Q ss_pred hhhcC------------------------------------------------------chhhhH---HHHhhhc-CCcE
Q psy11770 401 RVRDN------------------------------------------------------NGEVQQ---NLLDKVW-PRLR 422 (668)
Q Consensus 401 ~~~~~------------------------------------------------------~~~~~~---~~l~~~~-~~~~ 422 (668)
..... ...... +.+.+.. ..+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKIN 180 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCE
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEE
Confidence 00000 000000 1111112 2222
Q ss_pred EE-E-----ecCH--hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCc
Q psy11770 423 VL-A-----RSSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNF 494 (668)
Q Consensus 423 v~-~-----r~~p--~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~ 494 (668)
++ + ...| .+|...++.+.++ ++...+.|+++||+.||++|++.|++||||| |+.+.+|++||+++.+++.
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~-lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e 258 (279)
T 4dw8_A 181 VFRSEPYFLELVPQGIDKALSLSVLLEN-IGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDE 258 (279)
T ss_dssp EEEEETTEEEEECTTCCHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGG
T ss_pred EEEcCCcEEEEecCCCChHHHHHHHHHH-cCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCC
Confidence 22 1 2233 3799999988765 6888899999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHH
Q psy11770 495 SSIVKAVMW 503 (668)
Q Consensus 495 ~~i~~~l~~ 503 (668)
+++.++|++
T Consensus 259 ~Gv~~~i~~ 267 (279)
T 4dw8_A 259 DGVAEAIER 267 (279)
T ss_dssp THHHHHHHH
T ss_pred cHHHHHHHH
Confidence 999998863
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=9.9e-13 Score=124.83 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=109.9
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.+++.++|+.|+++|++++++||++...+..+++++|+.. ++
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~-------------------------------------~~ 78 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------------------------FF 78 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------------------------EE
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce-------------------------------------ee
Confidence 34567799999999999999999999999999999999831 12
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHH-HH---
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV-KA--- 500 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~-~~--- 500 (668)
.. ...|...++.++++ ++...+.++++||+.||++|++.|+++++++ ++.+.+++.||+++.+++..++. ++
T Consensus 79 ~~--~k~k~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~ 154 (180)
T 1k1e_A 79 LG--KLEKETACFDLMKQ-AGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDM 154 (180)
T ss_dssp ES--CSCHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHH
T ss_pred cC--CCCcHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHH
Confidence 11 24567777766554 4677789999999999999999999999999 89999999999999987777766 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy11770 501 VMWGRNVYDSISKFLQFQLTV 521 (668)
Q Consensus 501 l~~gR~~~~~i~~~i~~~l~~ 521 (668)
+...|..+.+++..+.|..+-
T Consensus 155 ~l~~~~~~~~~~~~~~~~~~~ 175 (180)
T 1k1e_A 155 ILQAQGKSSVFDTAQGFLKSV 175 (180)
T ss_dssp HHHHTTCTHHHHCHHHHHHHG
T ss_pred HHHhcCchhhhhhccchhhhh
Confidence 445677788888777776553
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.37 E-value=3e-12 Score=130.86 Aligned_cols=156 Identities=17% Similarity=0.192 Sum_probs=110.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehh------------------hHHHhhh-
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK------------------EFNRRVR- 403 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~------------------~~~~~~~- 403 (668)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+.. .++..+|. .......
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~ 113 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRS---YMITSNGARVHDSDGQQIFAHNLDRDIAADLFEI 113 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCC---EEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCc---cEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHH
Confidence 4588999999999999999999999999999999999999842 11222221 1111110
Q ss_pred --cC------------------------------------------------------chhhhH---HHHhhhcC-CcEE
Q psy11770 404 --DN------------------------------------------------------NGEVQQ---NLLDKVWP-RLRV 423 (668)
Q Consensus 404 --~~------------------------------------------------------~~~~~~---~~l~~~~~-~~~v 423 (668)
.. +..... +.+.+.+. .+.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~ 193 (285)
T 3pgv_A 114 VRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNV 193 (285)
T ss_dssp TTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEE
T ss_pred HhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEE
Confidence 00 000000 11111111 1111
Q ss_pred E------EecC--HhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcch--hcccCC
Q psy11770 424 L------ARSS--PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI--ILTDDN 493 (668)
Q Consensus 424 ~------~r~~--p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~--vl~~~~ 493 (668)
. .... ..+|...++.+.+. ++...+.++++||+.||++|++.|++||||| |+.+.+|++||+ ++.+++
T Consensus 194 ~~s~~~~~ei~~~~~~K~~al~~l~~~-lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~ 271 (285)
T 3pgv_A 194 SFSTLTCLEVMAGGVSKGHALEAVAKM-LGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNA 271 (285)
T ss_dssp EESSTTEEEEEETTCSHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGG
T ss_pred EEeCCceEEEecCCCChHHHHHHHHHH-hCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCC
Confidence 1 1222 24699999988765 6888899999999999999999999999999 999999999996 677889
Q ss_pred chHHHHHHHH
Q psy11770 494 FSSIVKAVMW 503 (668)
Q Consensus 494 ~~~i~~~l~~ 503 (668)
.+++.++|++
T Consensus 272 edGva~~i~~ 281 (285)
T 3pgv_A 272 DDAVPRYLRK 281 (285)
T ss_dssp GTHHHHHHHH
T ss_pred cchHHHHHHH
Confidence 9999998863
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-12 Score=132.85 Aligned_cols=158 Identities=19% Similarity=0.291 Sum_probs=99.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehh------------------hHH---Hh
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK------------------EFN---RR 401 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~------------------~~~---~~ 401 (668)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+..+...++..+|. ... ..
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (279)
T 3mpo_A 21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAW 100 (279)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHH
Confidence 458899999999999999999999999999999999999985432223333332 000 00
Q ss_pred hhcCc-------------------h-------------------h-------------hhHHH---HhhhcC-----CcE
Q psy11770 402 VRDNN-------------------G-------------------E-------------VQQNL---LDKVWP-----RLR 422 (668)
Q Consensus 402 ~~~~~-------------------~-------------------~-------------~~~~~---l~~~~~-----~~~ 422 (668)
..... . . ...+. +.+.+. .+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 3mpo_A 101 ARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFS 180 (279)
T ss_dssp HHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEE
T ss_pred HHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEE
Confidence 00000 0 0 00000 001110 011
Q ss_pred E------EEecCH--hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCc
Q psy11770 423 V------LARSSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNF 494 (668)
Q Consensus 423 v------~~r~~p--~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~ 494 (668)
+ +....| .+|...++.+.+. ++...+.++++||+.||++|++.|++||||| |+.+.+|++||+++.+++-
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~-lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 181 VVQSAPYFIEVMNRRASKGGTLSELVDQ-LGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAE 258 (279)
T ss_dssp EECCSSSEEEEEESSCCHHHHHHHHHHH-TTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC-----
T ss_pred EEEecCceEEEecCCCChHHHHHHHHHH-cCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCc
Confidence 1 112222 3599999888765 6888899999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHH
Q psy11770 495 SSIVKAVM 502 (668)
Q Consensus 495 ~~i~~~l~ 502 (668)
+++.++|+
T Consensus 259 ~Gv~~~i~ 266 (279)
T 3mpo_A 259 NGVAAAIR 266 (279)
T ss_dssp -CHHHHHC
T ss_pred cHHHHHHH
Confidence 99998875
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=9.4e-12 Score=127.37 Aligned_cols=72 Identities=17% Similarity=0.197 Sum_probs=66.2
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
.+|...++.+.++ ++...+.|+++||+.||++|++.|++||||| |+.+.+|++||+++.+++.+++.++|++
T Consensus 201 ~~K~~~l~~l~~~-lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASE-LGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHH-cCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 4699999888765 6888899999999999999999999999999 9999999999999999999999999864
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.5e-12 Score=131.37 Aligned_cols=72 Identities=18% Similarity=0.189 Sum_probs=66.2
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
.+|...++.+.++ ++...+.|+++||+.||.+|++.|++||||| |+.+.+|++||+++.+++.+++.++|++
T Consensus 210 ~~K~~~l~~l~~~-lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 210 VSKWTALSYLIDR-FDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CCHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHH-hCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 3699999988765 6888899999999999999999999999999 9999999999999999999999998864
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.3e-12 Score=136.93 Aligned_cols=155 Identities=14% Similarity=0.160 Sum_probs=115.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++||+....+..+++++|+...-...+.+.+..+.. .+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg---------------------~~ 236 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTG---------------------QV 236 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEE---------------------EE
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeee---------------------ee
Confidence 689999999999999999999999999999999999999842111111111100000 00
Q ss_pred E-EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 424 L-ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 424 ~-~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
. .-..+..|...++.+.++ ++..++.++++|||.||++|++.||+|++| ++.+.+++.||+++..+++.++.++|.
T Consensus 237 ~~~~~~~kpk~~~~~~~~~~-lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~ 313 (335)
T 3n28_A 237 LGEVVSAQTKADILLTLAQQ-YDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILS 313 (335)
T ss_dssp ESCCCCHHHHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHH
T ss_pred cccccChhhhHHHHHHHHHH-cCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHH
Confidence 0 012345677777776655 588889999999999999999999999999 689999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy11770 503 WGRNVYDSISKFLQFQLTVN 522 (668)
Q Consensus 503 ~gR~~~~~i~~~i~~~l~~n 522 (668)
.......+++.++.|.+.+|
T Consensus 314 ~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 314 AALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp HHHHHTTCCCCC--------
T ss_pred hHHHHhhhhccccccccccc
Confidence 87777778888888887766
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=122.51 Aligned_cols=117 Identities=17% Similarity=0.192 Sum_probs=95.8
Q ss_pred eEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH--HcCCccCCCceEEeehhhHHHhhhcCchhhh
Q psy11770 333 LTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIAT--KCGIVKPGEDYLILEGKEFNRRVRDNNGEVQ 410 (668)
Q Consensus 333 l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~--~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~ 410 (668)
...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 31 g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-------------------------- 76 (168)
T 3ewi_A 31 QKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-------------------------- 76 (168)
T ss_dssp CCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--------------------------
T ss_pred CCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--------------------------
Confidence 355677777776 4899999999999999999 67888888 55551
Q ss_pred HHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcc
Q psy11770 411 QNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 490 (668)
Q Consensus 411 ~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~ 490 (668)
++ ..+.+|...++.++++ ++..++.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.
T Consensus 77 ------------~~--~g~~~K~~~l~~~~~~-~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~ 140 (168)
T 3ewi_A 77 ------------TE--VSVSDKLATVDEWRKE-MGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICK 140 (168)
T ss_dssp ------------EE--CSCSCHHHHHHHHHHH-TTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECS
T ss_pred ------------EE--ECCCChHHHHHHHHHH-cCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeC
Confidence 11 1235788888887765 5788899999999999999999999999999 999999999999999
Q ss_pred cCCchHHHH
Q psy11770 491 DDNFSSIVK 499 (668)
Q Consensus 491 ~~~~~~i~~ 499 (668)
+++-+++++
T Consensus 141 ~~~~~G~~~ 149 (168)
T 3ewi_A 141 CSGGRGAIR 149 (168)
T ss_dssp SCTTTTHHH
T ss_pred CCCCccHHH
Confidence 877777443
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=126.10 Aligned_cols=108 Identities=17% Similarity=0.217 Sum_probs=91.5
Q ss_pred hHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecC
Q psy11770 349 VPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSS 428 (668)
Q Consensus 349 ~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~ 428 (668)
....|+.|+++|+++.++||++...+..+++++|+. .+|...
T Consensus 57 d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~-------------------------------------~~~~~~- 98 (195)
T 3n07_A 57 DGYGVKALMNAGIEIAIITGRRSQIVENRMKALGIS-------------------------------------LIYQGQ- 98 (195)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC-------------------------------------EEECSC-
T ss_pred cHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc-------------------------------------EEeeCC-
Confidence 344699999999999999999999999999999983 122222
Q ss_pred HhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHH
Q psy11770 429 PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 429 p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i 497 (668)
..|...++.++++ ++...+.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++-.++
T Consensus 99 -k~k~~~~~~~~~~-~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~ 164 (195)
T 3n07_A 99 -DDKVQAYYDICQK-LAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGA 164 (195)
T ss_dssp -SSHHHHHHHHHHH-HCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTH
T ss_pred -CCcHHHHHHHHHH-hCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCH
Confidence 4677777776654 5788899999999999999999999999999 9999999999999988776664
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.30 E-value=6.4e-12 Score=127.30 Aligned_cols=72 Identities=22% Similarity=0.218 Sum_probs=66.2
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
.+|...++.+.++ ++...+.++++||+.||++|++.|++||+|| |+.+.+|++||+++.+++.+++.++|++
T Consensus 199 ~~K~~~l~~l~~~-lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQER-LGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHH-HTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHH-cCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 4699989888665 6888999999999999999999999999999 9999999999999999999999999864
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.30 E-value=8.2e-12 Score=125.57 Aligned_cols=71 Identities=24% Similarity=0.287 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.+.++ ++...+.|+++||+.||++|++.|++||||| |+.+.+|+.||+++.+++.+++.++|++
T Consensus 183 ~K~~~l~~l~~~-lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEK-LGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHH-HTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHH-hCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 678888887665 6888899999999999999999999999999 9999999999999999999999999864
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.30 E-value=4.9e-12 Score=127.91 Aligned_cols=72 Identities=28% Similarity=0.364 Sum_probs=66.6
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
.+|...++.+.++ ++...+.++++||+.||++|++.|++||||| |+.+.+|++||+++.+++.+++.++|++
T Consensus 193 ~~K~~~l~~l~~~-lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADY-YRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHH-cCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 4799999988765 6888899999999999999999999999999 9999999999999999999999999864
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.3e-11 Score=116.54 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=92.1
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhh
Q psy11770 352 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 431 (668)
Q Consensus 352 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~ 431 (668)
+|+.|+++|+++.++||+....+..+++++|+. ++... ..
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--------------------------------------~~~~~--~~ 86 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--------------------------------------VLHGI--DR 86 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--------------------------------------EEESC--SC
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--------------------------------------eEeCC--CC
Confidence 899999999999999999999999999999982 12211 56
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 432 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 432 K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
|...++.+.++ ++...+.++++||+.||++|++.|+++++++ ++.+.+++.||+++.+++..++.+.+
T Consensus 87 k~~~l~~~~~~-~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 87 KDLALKQWCEE-QGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred hHHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 77888777655 5778889999999999999999999999999 89999999999999988866655443
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.3e-11 Score=127.35 Aligned_cols=73 Identities=19% Similarity=0.203 Sum_probs=66.8
Q ss_pred HhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 429 PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 429 p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+..|...++.+.++ ++...+.|++|||+.||++|++.|++||||| |+.+.+|++||+++.+++.+++.++|++
T Consensus 226 ~~~K~~al~~l~~~-lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 226 GLHKGWALQQLLKR-WNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp TCSHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCCHHHHHHHHHHH-hCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 35799999988765 6888899999999999999999999999999 9999999999999999999999999863
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=118.87 Aligned_cols=125 Identities=15% Similarity=0.161 Sum_probs=97.5
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhh
Q psy11770 352 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 431 (668)
Q Consensus 352 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~ 431 (668)
+|+.|+++|+++.++||++...+..+++++|+.. ++... ..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-------------------------------------~~~~~--kp 94 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-------------------------------------YYKGQ--VD 94 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-------------------------------------EECSC--SS
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-------------------------------------ceeCC--CC
Confidence 5999999999999999999999999999999841 22222 23
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH----HHHHHHHHHHH
Q psy11770 432 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS----IVKAVMWGRNV 507 (668)
Q Consensus 432 K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~----i~~~l~~gR~~ 507 (668)
|...++.+.+. ++..++.++++||+.||++|++.|+++++++ ++.+.++..||+++.+++..+ +.+.+...|..
T Consensus 95 k~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~ 172 (191)
T 3n1u_A 95 KRSAYQHLKKT-LGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNK 172 (191)
T ss_dssp CHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHH-hCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCc
Confidence 34444444333 4778889999999999999999999999999 899999999999999877555 44455567777
Q ss_pred HHHHHHHHHH
Q psy11770 508 YDSISKFLQF 517 (668)
Q Consensus 508 ~~~i~~~i~~ 517 (668)
+.++.+.+.+
T Consensus 173 ~~~~~~~~~~ 182 (191)
T 3n1u_A 173 AELAITGYLK 182 (191)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 7766555443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=119.48 Aligned_cols=104 Identities=17% Similarity=0.236 Sum_probs=90.2
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhh
Q psy11770 352 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 431 (668)
Q Consensus 352 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~ 431 (668)
+|+.|+++|+++.++||++...+..+++++|+. .+|... .+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~-------------------------------------~~f~~~--k~ 124 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT-------------------------------------HLYQGQ--SD 124 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC-------------------------------------EEECSC--SS
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-------------------------------------hhhccc--CC
Confidence 899999999999999999999999999999993 123322 57
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH
Q psy11770 432 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS 496 (668)
Q Consensus 432 K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~ 496 (668)
|...++.++++ ++..++.++++||+.||++|++.|+++++++ ++.+.+++.||+++.+++-.+
T Consensus 125 K~~~l~~~~~~-lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 125 KLVAYHELLAT-LQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred hHHHHHHHHHH-cCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 78888877665 6788899999999999999999999999999 899999999999998775444
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.24 E-value=6.9e-11 Score=116.81 Aligned_cols=156 Identities=20% Similarity=0.244 Sum_probs=110.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH------------------HHhhh-
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF------------------NRRVR- 403 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~------------------~~~~~- 403 (668)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+.. ..+..+|..+ .....
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~ 95 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASMDEEWILWNEIRK 95 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999998732 1233232110 00011
Q ss_pred cC-----------------------chhhhHHHHhhhcCCcEEE-----Eec--CHhhHHHHHHHHHHhhcCCCCCEEEE
Q psy11770 404 DN-----------------------NGEVQQNLLDKVWPRLRVL-----ARS--SPSDKYTLVKGMIDSKISAGREVVAV 453 (668)
Q Consensus 404 ~~-----------------------~~~~~~~~l~~~~~~~~v~-----~r~--~p~~K~~iv~~l~~~~~~~~~~~v~~ 453 (668)
.. ........++..-..+.+. ... ....|...++.+.++ ++...+.+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~-~~~~~~~~~~ 174 (231)
T 1wr8_A 96 RFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEF-LGIKPKEVAH 174 (231)
T ss_dssp HCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHH-HTSCGGGEEE
T ss_pred hCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHH-cCCCHHHEEE
Confidence 00 0000111122211223333 122 234788899888665 5777888999
Q ss_pred EcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 454 TGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 454 iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.+++.++|++
T Consensus 175 iGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 175 VGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp EECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 999999999999999999999 8999999999999998888899988863
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.21 E-value=5.8e-11 Score=121.11 Aligned_cols=71 Identities=24% Similarity=0.270 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.+++. ++...+.++++||+.||++|++.|++||+|+ ++.+.+++.||+++.+++.+++.++|++
T Consensus 198 ~K~~~l~~l~~~-~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 198 NKGTGVKSLADV-LGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp SHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHH-hCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 799999888765 5777889999999999999999999999999 8999999999999998889999998863
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=4.3e-11 Score=111.41 Aligned_cols=110 Identities=21% Similarity=0.244 Sum_probs=91.7
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhh
Q psy11770 352 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 431 (668)
Q Consensus 352 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~ 431 (668)
+++.|+++|+++.++||++...+..+++++|+.. .+... ..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------------------~~~~~--kp 79 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY-------------------------------------LFQGV--VD 79 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE-------------------------------------EECSC--SC
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE-------------------------------------eeccc--CC
Confidence 8999999999999999999999999999999841 22222 45
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH-HHHHHH
Q psy11770 432 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS-IVKAVM 502 (668)
Q Consensus 432 K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~-i~~~l~ 502 (668)
|...++.+.++ ++...+.++++||+.||++|++.||++++++ ++.+.+++.||+++.+++..+ +.++++
T Consensus 80 k~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 80 KLSAAEELCNE-LGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp HHHHHHHHHHH-HTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred hHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 66666666554 5778889999999999999999999999999 899999999999999888666 555543
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.13 E-value=7.5e-11 Score=119.53 Aligned_cols=72 Identities=22% Similarity=0.297 Sum_probs=65.0
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
..|...++.+.+. ++...+.++++||+.||.+|++.|++|++|+ |+.+.+++.||+++.+++.+++.++|++
T Consensus 190 ~~K~~~~~~l~~~-l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 190 LHKANGISRLLKR-WDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp CSHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHH-hCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 4799999888765 6788889999999999999999999999999 9999999999999998888999998863
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.12 E-value=4.6e-10 Score=115.55 Aligned_cols=71 Identities=25% Similarity=0.336 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcc-cCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT-DDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~-~~~~~~i~~~l~~ 503 (668)
+|...++.+.+. ++...+.++++||+.||.+|++.|++||+|+ |+.+.+++.||+++. +++.+++.++|++
T Consensus 224 ~K~~~l~~l~~~-~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKH-YNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 799999888765 5777889999999999999999999999999 899999999999999 9899999998863
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=2e-10 Score=111.61 Aligned_cols=137 Identities=15% Similarity=0.149 Sum_probs=103.5
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+..+..+...+. ..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~---------------------~~ 132 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALN---------------------GL 132 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE---------------------EE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEE---------------------ee
Confidence 357899999999999999999999999999999999999984321111111110000 00
Q ss_pred EEEe-cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 423 VLAR-SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 423 v~~r-~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
+... .....|..+++.+.++ ++...+.++++||+.||++|++.||++++| ++.+..++.||+++.++++.++..++
T Consensus 133 ~~~~~~~~k~k~~~~~~~~~~-~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 133 VTGHMMFSHSKGEMLLVLQRL-LNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLI 209 (217)
T ss_dssp EEESCCSTTHHHHHHHHHHHH-HTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC-
T ss_pred eccCCCCCCChHHHHHHHHHH-cCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHh
Confidence 1111 1346778888877655 578889999999999999999999999999 68888999999999999999998887
Q ss_pred HH
Q psy11770 502 MW 503 (668)
Q Consensus 502 ~~ 503 (668)
++
T Consensus 210 ~~ 211 (217)
T 3m1y_A 210 EG 211 (217)
T ss_dssp --
T ss_pred cc
Confidence 53
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=3.2e-10 Score=109.26 Aligned_cols=132 Identities=22% Similarity=0.266 Sum_probs=96.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.++++.|++.|+++.++||+....+..+.+.+|+.......+......+ ...+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~ 134 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKL---------------------TGDV 134 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE---------------------EEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEE---------------------cCCc
Confidence 5678999999999999999999999999888888888887321001111100000 0000
Q ss_pred EEe-cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHH
Q psy11770 424 LAR-SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r-~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
... +.+..|...+..+.++ ++...+.++++||+.||++|++.||++++|+ +.+..+..||+++.++++..+..
T Consensus 135 ~~~~~~~~~K~~~l~~~~~~-lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 135 EGEVLKENAKGEILEKIAKI-EGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp ECSSCSTTHHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccCccCCccHHHHHHHHHHH-cCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 001 2245788888777654 5788889999999999999999999999997 56777889999998777777654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.04 E-value=7.2e-10 Score=119.50 Aligned_cols=139 Identities=17% Similarity=0.220 Sum_probs=111.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++||.....+..+++++|+...-...+.+.+. .+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg-------------------------~~ 310 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG-------------------------TL 310 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT-------------------------EE
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC-------------------------EE
Confidence 78999999999999999999999999999999999999994211111111100 11
Q ss_pred EEe-----cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHH
Q psy11770 424 LAR-----SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r-----~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~ 498 (668)
..+ ..+..|..+++.+.++ ++...+.++++||+.||++|++.||+|+++ ++.+..++.||+++..+++.++.
T Consensus 311 tg~~~~~v~~~kpk~~~~~~~~~~-~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll 387 (415)
T 3p96_A 311 TGRVVGPIIDRAGKATALREFAQR-AGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVL 387 (415)
T ss_dssp EEEECSSCCCHHHHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHH
T ss_pred EeeEccCCCCCcchHHHHHHHHHH-cCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHH
Confidence 111 2367888888887665 578888999999999999999999999999 57888999999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy11770 499 KAVMWGRNVYDS 510 (668)
Q Consensus 499 ~~l~~gR~~~~~ 510 (668)
.++..+|.-+..
T Consensus 388 ~~l~~~~~~~~~ 399 (415)
T 3p96_A 388 FLLGVTRGEIEA 399 (415)
T ss_dssp HHTTCCHHHHHH
T ss_pred HHhCCCHHHHHH
Confidence 998777665554
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.03 E-value=2.3e-09 Score=108.36 Aligned_cols=70 Identities=27% Similarity=0.304 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
+|...++.+.+. ++...+.++++||+.||++|++.|++|++|| ++.+..++.||+++.+++.+++.++|+
T Consensus 190 ~K~~~~~~~~~~-~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRER-MNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHH-cCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 799888888765 6778889999999999999999999999999 899999999999999888999998885
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.3e-10 Score=111.38 Aligned_cols=71 Identities=13% Similarity=0.107 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHh-------cchhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEA-------SDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~-------ad~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.+.+. ++...+.++++||+.||.+|++.|++||+|| |+.+.+++. ||+++.+++.+++.++|++
T Consensus 162 ~K~~~l~~l~~~-~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 162 NKGNATQYLQQH-LAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp SHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHH-hCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 799999988765 6777889999999999999999999999999 999999986 8899998888999998864
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-09 Score=100.93 Aligned_cols=117 Identities=15% Similarity=0.191 Sum_probs=92.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.+++.++|+.|+++|++++++||++...+..+.+++|+.. .|
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------------~~ 79 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-------------------------------------IY 79 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE-------------------------------------EE
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh-------------------------------------hc
Confidence 45778999999999999999999999999999999999831 12
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHH-HHHH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV-KAVM 502 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~-~~l~ 502 (668)
.. +..|...++.+.++ ++..++.++++||+.||++|.+.||++++++ ++.+..++.||+++.+.+..++. ++++
T Consensus 80 ~~--~kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~~~~~ 154 (162)
T 2p9j_A 80 TG--SYKKLEIYEKIKEK-YSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALREVAE 154 (162)
T ss_dssp EC--C--CHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHHHHHH
T ss_pred cC--CCCCHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHHHHHH
Confidence 11 22344455444433 4677889999999999999999999999998 88888889999999987777766 4443
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.5e-09 Score=109.23 Aligned_cols=71 Identities=23% Similarity=0.296 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.+.+. ++...+.++++||+.||++|++.|++||+|+ ++.+..++.||+++.+++.+++.++|++
T Consensus 216 ~K~~~~~~~~~~-~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 216 SKGQALKRLAKQ-LNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp SHHHHHHHHHHH-TTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHH-hCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 577778877655 6778889999999999999999999999999 8999999999999998899999998863
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.98 E-value=7.9e-10 Score=112.23 Aligned_cols=71 Identities=14% Similarity=0.087 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHhhcC-CCCCE--EEEEcCCccCHHHHhhCCccEeeCCCcc---HHHHHh--cc-hhcccCCchHHHHHH
Q psy11770 431 DKYTLVKGMIDSKIS-AGREV--VAVTGDGTNDGPALKKADVGFAMGITGT---DVAKEA--SD-IILTDDNFSSIVKAV 501 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~-~~~~~--v~~iGDg~ND~~mlk~A~vGIam~~~~~---~~ak~~--ad-~vl~~~~~~~i~~~l 501 (668)
+|...++.+.+. ++ ...+. ++++||+.||.+|++.|++||+|+ |+. +.+++. || +++.+++.+++.++|
T Consensus 189 ~K~~~l~~l~~~-~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l 266 (275)
T 1xvi_A 189 GKDQAANWIIAT-YQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREGL 266 (275)
T ss_dssp CHHHHHHHHHHH-HHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC-----------------------------
T ss_pred CHHHHHHHHHHH-hhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHHH
Confidence 688888877654 45 55666 999999999999999999999999 887 556553 78 899888899999888
Q ss_pred HH
Q psy11770 502 MW 503 (668)
Q Consensus 502 ~~ 503 (668)
++
T Consensus 267 ~~ 268 (275)
T 1xvi_A 267 DH 268 (275)
T ss_dssp --
T ss_pred HH
Confidence 63
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.96 E-value=1e-09 Score=113.56 Aligned_cols=135 Identities=13% Similarity=0.212 Sum_probs=102.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++||.....+..+++++|+..--+..+..++..+.. .+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg---------------------~i 237 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD---------------------NI 237 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE---------------------EE
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee---------------------eE
Confidence 488999999999999999999999999999999999999842111111111110000 00
Q ss_pred EE-ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 424 LA-RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 424 ~~-r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.. -..+..|..+++.+.++ ++...+.++++||+.||++|++.||+|++++ +.+..++.||.++..+++.++.++++
T Consensus 238 ~~~~~~~kpkp~~~~~~~~~-lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 238 TLPIMNAANKKQTLVDLAAR-LNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CSSCCCHHHHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred ecccCCCCCCHHHHHHHHHH-cCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 00 12456778888777655 5778889999999999999999999999994 77888899999998888988877664
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.1e-09 Score=104.48 Aligned_cols=111 Identities=17% Similarity=0.244 Sum_probs=89.3
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHh
Q psy11770 351 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 430 (668)
Q Consensus 351 ~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~ 430 (668)
.+|+.|+++|++++++||++...+..+++++|+.. +|.. ..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-------------------------------------~~~~--~k 100 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-------------------------------------LYQG--QS 100 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-------------------------------------EECS--CS
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-------------------------------------eecC--CC
Confidence 48999999999999999999999999999999831 1211 23
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHH-HHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV-KAVM 502 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~-~~l~ 502 (668)
.|...++.+.++ ++...+.++++||+.||++|++.||++++++ ++.+.+++.||+++.+.+..++. ++++
T Consensus 101 pk~~~~~~~~~~-~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 101 NKLIAFSDLLEK-LAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp CSHHHHHHHHHH-HTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 456666666544 4667788999999999999999999999998 78888888999999877666665 5543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.93 E-value=4e-10 Score=113.42 Aligned_cols=71 Identities=28% Similarity=0.332 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
.|...++.+.++ ++...+.++++||+.||++|++.|++|++|+ |+.+..+..||+++.+++.+++.++|++
T Consensus 187 ~K~~~~~~~~~~-~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 187 TKQKGIDEIIRH-FGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp SHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 788888877665 6788889999999999999999999999999 9999999999999998888889988863
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.92 E-value=8.6e-10 Score=109.47 Aligned_cols=147 Identities=13% Similarity=0.137 Sum_probs=95.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc-CCccCCCceEEeehhh------HHHh-------------hh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC-GIVKPGEDYLILEGKE------FNRR-------------VR 403 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~-gi~~~~~~~i~~~g~~------~~~~-------------~~ 403 (668)
.+.+.+.++|++|+++| +++++|||+...+..+.+.+ .++..++..+..+|+. +... ..
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 101 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVS 101 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHHh
Confidence 57899999999999999 99999999999998887664 2222333333222221 0000 00
Q ss_pred cC--------c----------hhhhHH-------HHhhhcCCcEEE-----EecCH--hhHHHHHHHHHHhhcCCCCCEE
Q psy11770 404 DN--------N----------GEVQQN-------LLDKVWPRLRVL-----ARSSP--SDKYTLVKGMIDSKISAGREVV 451 (668)
Q Consensus 404 ~~--------~----------~~~~~~-------~l~~~~~~~~v~-----~r~~p--~~K~~iv~~l~~~~~~~~~~~v 451 (668)
.. . .....+ .+.+. ..+.+. ....| .+|...++.+.+. .+ |
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~----~g--v 174 (239)
T 1u02_A 102 DFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVETYYGKMIIELRVPGVNKGSAIRSVRGE----RP--A 174 (239)
T ss_dssp HSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCEEEECSSEEEEECTTCCHHHHHHHHHTT----SC--E
T ss_pred hCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhh----CC--e
Confidence 00 0 000000 11111 122221 12233 3799999988543 33 9
Q ss_pred EEEcCCccCHHHHhhC--CccEeeCCCccHHHHHhcchhccc-CCchHHHHHHHH
Q psy11770 452 AVTGDGTNDGPALKKA--DVGFAMGITGTDVAKEASDIILTD-DNFSSIVKAVMW 503 (668)
Q Consensus 452 ~~iGDg~ND~~mlk~A--~vGIam~~~~~~~ak~~ad~vl~~-~~~~~i~~~l~~ 503 (668)
+++||+.||.+||+.| ++||||| |+ ++.||+++.+ ++.+++.++|++
T Consensus 175 ia~GD~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 175 IIAGDDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp EEEESSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred EEEeCCCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 9999999999999999 9999999 87 6789999987 778888888763
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=3.2e-09 Score=106.67 Aligned_cols=69 Identities=19% Similarity=0.170 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHHhhcCCCC--CEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGR--EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~--~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
.+|...++.+++. ++... +.++++||+.||.+|++.|++||+|+ |+.+ + .+++++.+++-+++.+++++
T Consensus 175 ~~K~~~l~~l~~~-~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRAL-WPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHT-CSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH-hCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 6899999988664 56666 89999999999999999999999999 8888 4 78899988888999988763
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.87 E-value=4.1e-09 Score=103.68 Aligned_cols=129 Identities=23% Similarity=0.326 Sum_probs=95.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-+. ++.+...
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 156 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--IAGDDSV------------------------- 156 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE--EECTTTS-------------------------
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee--EEeCCCC-------------------------
Confidence 4678999999999999999999999999999999999998432211 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc---cEeeCCCccHHHHH-hcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDVAKE-ASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v---GIam~~~~~~~ak~-~ad~vl~~~~~~~i~~ 499 (668)
.....|..+++.+.++ ++...+.+++|||+.||+.|++.||+ +|++|.+..+..++ .||+++. ++..+.+
T Consensus 157 ---~~~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~ 230 (237)
T 4ex6_A 157 ---ERGKPHPDMALHVARG-LGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVT 230 (237)
T ss_dssp ---SSCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHH
Confidence 0112234445544433 58888999999999999999999999 99998444455555 7999987 7899998
Q ss_pred HHHHHH
Q psy11770 500 AVMWGR 505 (668)
Q Consensus 500 ~l~~gR 505 (668)
+|..|+
T Consensus 231 ~l~~~~ 236 (237)
T 4ex6_A 231 AVLDGH 236 (237)
T ss_dssp HHHHC-
T ss_pred HHHccC
Confidence 887664
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.84 E-value=2.2e-09 Score=107.22 Aligned_cols=60 Identities=30% Similarity=0.278 Sum_probs=51.9
Q ss_pred hhHHHHHHHHHHhhcCC-CCCEEEEEcCCccCHHHHhhCCccEeeCCCcc-HHHHHhcchhccc
Q psy11770 430 SDKYTLVKGMIDSKISA-GREVVAVTGDGTNDGPALKKADVGFAMGITGT-DVAKEASDIILTD 491 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~-~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~-~~ak~~ad~vl~~ 491 (668)
.+|...++.+.+. ++. ..+.|+++||+.||++||+.|++||+|| |+. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~-~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDF-YKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHH-HHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHH-hccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEecc
Confidence 4799999988765 455 6789999999999999999999999999 887 7788889998863
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.83 E-value=1.4e-09 Score=103.86 Aligned_cols=119 Identities=20% Similarity=0.327 Sum_probs=91.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|++++++|+.....+..+ +.+|+... ...+...... ..
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~------------------------~~ 132 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDGK------------------------FQ 132 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETTE------------------------EE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCCc------------------------eE
Confidence 6889999999999999999999999998888888 88887422 1111111100 00
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
-....|..|...++.+ ..+.++++||+.||++|++.||+||+|+ ++.+ .||+++. ++..+.++|+
T Consensus 133 ~~~~~~~~k~~~l~~l-------~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 133 GIRLRFRDKGEFLKRF-------RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp EEECCSSCHHHHHGGG-------TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred CCcCCccCHHHHHHhc-------CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence 1345667888887764 5678999999999999999999999999 7766 8999987 6777777664
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.76 E-value=9.5e-09 Score=107.22 Aligned_cols=155 Identities=17% Similarity=0.258 Sum_probs=98.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEE--eehh------hHHHhhhcC-chhhh---H
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLI--LEGK------EFNRRVRDN-NGEVQ---Q 411 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~--~~g~------~~~~~~~~~-~~~~~---~ 411 (668)
.+++++.+.++.|++ |+++.++||+....+..+.+.+++.. .+.. .... .+....... ..... .
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG---ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS---EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh---hhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 468999999999999 99999999998777777777777731 1110 0000 000000000 00000 0
Q ss_pred HHHhhhcCCc-------EEE---EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC----CccEeeCCCc
Q psy11770 412 NLLDKVWPRL-------RVL---ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA----DVGFAMGITG 477 (668)
Q Consensus 412 ~~l~~~~~~~-------~v~---~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A----~vGIam~~~~ 477 (668)
+.++. +.++ .+. --..+.+|...++.+..+ ...+.|+++|||.||++|++.| |+|||| |+
T Consensus 179 ~~l~~-~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~---~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na 252 (332)
T 1y8a_A 179 ELFRK-LDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCES---KGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NG 252 (332)
T ss_dssp HHHHH-HHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHH---HTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SC
T ss_pred HHHHH-HHHHHhhcCCCceeeEEecCCCCCHHHHHhccChh---hcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cC
Confidence 01100 0000 000 112356788888754221 1123499999999999999999 999999 78
Q ss_pred cHHHHHhcchhcccCCchHHHHHHH----HHHHHH
Q psy11770 478 TDVAKEASDIILTDDNFSSIVKAVM----WGRNVY 508 (668)
Q Consensus 478 ~~~ak~~ad~vl~~~~~~~i~~~l~----~gR~~~ 508 (668)
.+.+|+.||+++.+++.+++.++|+ +||..+
T Consensus 253 ~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~ 287 (332)
T 1y8a_A 253 NEYALKHADVVIISPTAMSEAKVIELFMERKERAF 287 (332)
T ss_dssp CHHHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG
T ss_pred CHHHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh
Confidence 9999999999999989988887754 566665
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.2e-08 Score=96.65 Aligned_cols=126 Identities=13% Similarity=0.198 Sum_probs=90.7
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceE----EeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYL----ILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i----~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... .+. ...... .
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------------------~ 138 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRE--NIFAVETIWNSDG----------------------S 138 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGG--GEEEEEEEECTTS----------------------B
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcc--cEEEeeeeecCCC----------------------c
Confidence 789999999999999999999999999999999999998421 111 110000 0
Q ss_pred cEEE--EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhh----CCccEeeCCCccHHHHHhcchhcccCCc
Q psy11770 421 LRVL--ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK----ADVGFAMGITGTDVAKEASDIILTDDNF 494 (668)
Q Consensus 421 ~~v~--~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~----A~vGIam~~~~~~~ak~~ad~vl~~~~~ 494 (668)
..-+ ...+|..+.+.+... ++...+.++++||+.||++|++. +.++++++ ++.+..+..||+++. ++
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~ 211 (219)
T 3kd3_A 139 FKELDNSNGACDSKLSAFDKA----KGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NV 211 (219)
T ss_dssp EEEEECTTSTTTCHHHHHHHH----GGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SH
T ss_pred eeccCCCCCCcccHHHHHHHH----hCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CH
Confidence 0001 123445565555443 46778999999999999999976 45566666 677888899999987 67
Q ss_pred hHHHHHH
Q psy11770 495 SSIVKAV 501 (668)
Q Consensus 495 ~~i~~~l 501 (668)
..+.++|
T Consensus 212 ~el~~~l 218 (219)
T 3kd3_A 212 AELASLI 218 (219)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 7776554
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=3.9e-09 Score=101.62 Aligned_cols=128 Identities=12% Similarity=0.078 Sum_probs=96.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCC-ceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE-DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~-~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-. ..+ +.+..
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i-~~~~~------------------------- 123 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADV-LGRDE------------------------- 123 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGE-ECTTT-------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceE-EeCCC-------------------------
Confidence 356899999999999999999999999999999999999842210 000 00000
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc-cEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v-GIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
.....|...++.+.++ ++...+.+++|||+.||+.|.+.||+ +|+|+ ++.+..++.||+++. ++..+.+.+
T Consensus 124 ----~~~kp~~~~~~~~~~~-~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~ 195 (205)
T 3m9l_A 124 ----APPKPHPGGLLKLAEA-WDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLL 195 (205)
T ss_dssp ----SCCTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHH
Confidence 0111233344444433 57888999999999999999999999 99999 887777888999997 788888888
Q ss_pred HHHH
Q psy11770 502 MWGR 505 (668)
Q Consensus 502 ~~gR 505 (668)
...+
T Consensus 196 ~~~~ 199 (205)
T 3m9l_A 196 SAEG 199 (205)
T ss_dssp HHTT
T ss_pred Hhcc
Confidence 6543
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.72 E-value=2.6e-08 Score=96.99 Aligned_cols=124 Identities=14% Similarity=0.162 Sum_probs=95.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. .+
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------~~ 133 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA--------------------------------IV 133 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE--------------------------------EE
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee--------------------------------ee
Confidence 4689999999999999999999999999999999999998422111 11
Q ss_pred EEec--CHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc---cEeeCCCccHHH--HHhcchhcccCCchH
Q psy11770 424 LARS--SPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDVA--KEASDIILTDDNFSS 496 (668)
Q Consensus 424 ~~r~--~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v---GIam~~~~~~~a--k~~ad~vl~~~~~~~ 496 (668)
.+.. ....|...++.+.++ ++...+.+++|||+.||+.|.+.||+ +|++| ++.... +..||+++. ++..
T Consensus 134 ~~~~~~~~kp~~~~~~~~~~~-lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~--s~~e 209 (226)
T 3mc1_A 134 GSSLDGKLSTKEDVIRYAMES-LNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYG-FGSYEELKNAGANYIVN--SVDE 209 (226)
T ss_dssp EECTTSSSCSHHHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSS-SSCHHHHHHHTCSEEES--SHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHH-hCcCcccEEEECCCHHHHHHHHHCCCCEEEEccC-CCCHHHHHHcCCCEEEC--CHHH
Confidence 1111 123466666666554 58888899999999999999999999 88888 554433 588999997 7888
Q ss_pred HHHHHHH
Q psy11770 497 IVKAVMW 503 (668)
Q Consensus 497 i~~~l~~ 503 (668)
+.+++..
T Consensus 210 l~~~~~~ 216 (226)
T 3mc1_A 210 LHKKILE 216 (226)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8888763
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.69 E-value=2.9e-08 Score=101.23 Aligned_cols=72 Identities=21% Similarity=0.277 Sum_probs=64.2
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
..|...++.+.++ ++...+.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++.+++.++|++
T Consensus 210 ~~k~~~~~~~~~~-~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~gv~~~~~~ 281 (289)
T 3gyg_A 210 TGKNEIVTFMLEK-YNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITDSEYSKGITNTLKK 281 (289)
T ss_dssp CSHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH-cCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcCCCCcCHHHHHHHH
Confidence 4788888887665 6788889999999999999999999999999 8999999999999998888899988863
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.9e-08 Score=97.68 Aligned_cols=120 Identities=14% Similarity=0.195 Sum_probs=87.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.+++.+.++.+++.|++++++|+.....+....+.+|+...-+.. +
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--------------------------------~ 141 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--------------------------------A 141 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE--------------------------------E
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE--------------------------------E
Confidence 35789999999999999999999999998888888888874221111 1
Q ss_pred EEecCHh--hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEee----CCCccHHHHHhcchhcccCCchHH
Q psy11770 424 LARSSPS--DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM----GITGTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 424 ~~r~~p~--~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam----~~~~~~~ak~~ad~vl~~~~~~~i 497 (668)
.+...+. .|...++.+.++ ++...+.+++|||+.||++|++.||+++++ + ++.+..+..||+++. ++..+
T Consensus 142 ~~~~~~~~kp~~~~~~~~~~~-~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~--~~~el 217 (226)
T 1te2_A 142 SAEKLPYSKPHPQVYLDCAAK-LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLS--SLTEL 217 (226)
T ss_dssp ECTTSSCCTTSTHHHHHHHHH-HTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECS--CGGGC
T ss_pred eccccCCCCCChHHHHHHHHH-cCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEEC--CHHHH
Confidence 1111111 123444444433 578888999999999999999999999998 5 555566788999987 55554
Q ss_pred HH
Q psy11770 498 VK 499 (668)
Q Consensus 498 ~~ 499 (668)
..
T Consensus 218 ~~ 219 (226)
T 1te2_A 218 TA 219 (226)
T ss_dssp CH
T ss_pred hH
Confidence 44
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=3.6e-08 Score=99.11 Aligned_cols=60 Identities=17% Similarity=0.267 Sum_probs=52.4
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcC----CccCHHHHhhCC-ccEeeCCCccHHHHHhcchhcccCCc
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKAD-VGFAMGITGTDVAKEASDIILTDDNF 494 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGD----g~ND~~mlk~A~-vGIam~~~~~~~ak~~ad~vl~~~~~ 494 (668)
.+|...++.+ ++...+.|+++|| +.||.+||+.|+ +|++|+ |+.+.+|+.||+++.+++.
T Consensus 196 vsKg~al~~l----~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 196 WDKRYCLDSL----DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp CSTTHHHHHH----TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC--
T ss_pred CCHHHHHHHH----HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCcC
Confidence 3788888887 4778899999999 999999999999 599998 9999999999999976553
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.62 E-value=3e-08 Score=96.89 Aligned_cols=128 Identities=14% Similarity=0.074 Sum_probs=94.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-+.+ +.+.+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~------------------------- 143 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINI--VTRDDV------------------------- 143 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCE--ECGGGS-------------------------
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhee--eccccC-------------------------
Confidence 35789999999999999999999999999999999999985322211 111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc---cEeeCCCccHHHHHh-cchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDVAKEA-SDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v---GIam~~~~~~~ak~~-ad~vl~~~~~~~i~~ 499 (668)
.....|..+++.+.++ ++...+.+++|||+.||+.|.+.||+ +|++|.+..+..++. ||+++. ++..+.+
T Consensus 144 ---~~~kp~~~~~~~~~~~-l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~ 217 (233)
T 3s6j_A 144 ---SYGKPDPDLFLAAAKK-IGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLN 217 (233)
T ss_dssp ---SCCTTSTHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHH
T ss_pred ---CCCCCChHHHHHHHHH-hCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHH
Confidence 0112234455554443 57888999999999999999999998 777775556666665 999987 7888888
Q ss_pred HHHHH
Q psy11770 500 AVMWG 504 (668)
Q Consensus 500 ~l~~g 504 (668)
+|+..
T Consensus 218 ~l~~~ 222 (233)
T 3s6j_A 218 HLDEI 222 (233)
T ss_dssp TGGGT
T ss_pred HHHHH
Confidence 87643
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1.5e-07 Score=90.44 Aligned_cols=129 Identities=11% Similarity=0.069 Sum_probs=93.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-.+.+.. +.+. ....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~-~~~~---------------------~~~~ 125 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEI-DDSD---------------------RVVG 125 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEE-CTTS---------------------CEEE
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEE-cCCc---------------------eEEe
Confidence 5789999999999999 999999999999999999999984211011111 1100 0001
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.-...|+.|...++.+ +..+..++++||+.||++|.+.||+++++. +.+..+..++.++..+++..+.+++.
T Consensus 126 ~~~p~p~~~~~~l~~l-----~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 126 YQLRQKDPKRQSVIAF-----KSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp EECCSSSHHHHHHHHH-----HHTTCEEEEEECSSTTHHHHHHSSEEEEES--CCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred eecCCCchHHHHHHHH-----HhcCCEEEEEeCChhhHHHHHhcCccEEEC--CcHHHHHHHhhhccccchHHHHHHHH
Confidence 1125778898888876 345779999999999999999999999985 45555666655543347888887764
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.59 E-value=2e-08 Score=97.32 Aligned_cols=123 Identities=12% Similarity=0.085 Sum_probs=85.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.+++.+.++.|++.|+++.++|++ ..+..+.+.+|+...-+. ++.+.+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 141 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDA--IADPAEV------------------------- 141 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSE--ECCTTTS-------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcce--EeccccC-------------------------
Confidence 35789999999999999999999998 455667777887421111 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
....| +...++.+.++ ++...+.++++||+.||++|++.||++++|. ++.+..+ .||+++.+.+.-++..++
T Consensus 142 -~~~Kp--~~~~~~~~~~~-lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 142 -AASKP--APDIFIAAAHA-VGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp -SSCTT--SSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred -CCCCC--ChHHHHHHHHH-cCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHHH
Confidence 01111 22233433333 5788899999999999999999999999999 7877777 899998865544455444
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.2e-07 Score=92.81 Aligned_cols=109 Identities=17% Similarity=0.130 Sum_probs=79.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.|++.+.++.|++.|+++.++||.....+..+++.+|+..--...+...+..+.. .+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g---------------------~~ 150 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTG---------------------RI 150 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEE---------------------EE
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEee---------------------ee
Confidence 479999999999999999999999999999999999999841101111111000000 01
Q ss_pred E-EecCHhhHHHHHHHHHHhhcC---CCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 424 L-ARSSPSDKYTLVKGMIDSKIS---AGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 424 ~-~r~~p~~K~~iv~~l~~~~~~---~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
. ..+.+..|...++.+.++ ++ ...+.++++||+.||++|++.||+++++.
T Consensus 151 ~~~~~~~~~K~~~~~~~~~~-~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 151 EGTPSFREGKVVRVNQWLAG-MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp ESSCSSTHHHHHHHHHHHHH-TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred cCCCCcchHHHHHHHHHHHH-cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 1 112346788888776554 35 56789999999999999999999999986
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.4e-07 Score=92.39 Aligned_cols=123 Identities=11% Similarity=0.084 Sum_probs=79.9
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.|++.+.++.|++.|+++.++|+... +..+.+.+|+...-+. ++.+.+.
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~--i~~~~~~-------------------------- 142 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA--IVDPTTL-------------------------- 142 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE--ECCC-----------------------------
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE--EeeHhhC--------------------------
Confidence 689999999999999999999999754 7778888887432111 1111100
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.+ +..|...++.+.++ ++...+.+++|||+.||+.|.+.||++++|. ++.+..+ .||+++.+.+--.+..+++
T Consensus 143 ~~--~Kp~~~~~~~~~~~-lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 143 AK--GKPDPDIFLTAAAM-LDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp --------CCHHHHHHHH-HTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHHHHHH
T ss_pred CC--CCCChHHHHHHHHH-cCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHHHHHH
Confidence 01 11122233333332 5788899999999999999999999999998 7776666 8999998554444444443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.54 E-value=4.4e-08 Score=94.93 Aligned_cols=124 Identities=18% Similarity=0.145 Sum_probs=84.1
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.+++.+.++.+++.|++++++|+..........+.+|+...-+. ++.+...
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------------------------- 141 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDI--IIGGEDV-------------------------- 141 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSE--EECGGGC--------------------------
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheee--eeehhhc--------------------------
Confidence 368999999999999999999999999888888888887422111 1111100
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEee----CCCccHHHHHh-cchhcccCCchHHHH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM----GITGTDVAKEA-SDIILTDDNFSSIVK 499 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam----~~~~~~~ak~~-ad~vl~~~~~~~i~~ 499 (668)
. .+..|...++.+.++ ++...+.++++||+.||++|++.||+++++ + ++.+..+.. ||+++. +++.+.+
T Consensus 142 ~--~~k~~~~~~~~~~~~-~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~ 215 (225)
T 3d6j_A 142 T--HHKPDPEGLLLAIDR-LKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLIS 215 (225)
T ss_dssp S--SCTTSTHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC-
T ss_pred C--CCCCChHHHHHHHHH-hCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHH
Confidence 0 011222334444333 577888999999999999999999999887 4 444445554 899887 5666666
Q ss_pred HHH
Q psy11770 500 AVM 502 (668)
Q Consensus 500 ~l~ 502 (668)
.|.
T Consensus 216 ~l~ 218 (225)
T 3d6j_A 216 VPE 218 (225)
T ss_dssp ---
T ss_pred hhh
Confidence 653
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.4e-07 Score=92.96 Aligned_cols=122 Identities=17% Similarity=0.177 Sum_probs=92.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+...-+. .+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------~~ 157 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKY--------------------------------IA 157 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE--------------------------------EE
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEE--------------------------------EE
Confidence 3679999999999999999999999999999999999998432111 11
Q ss_pred EEecC--HhhHHHHHHHHHHhhcCCC-CCEEEEEcCCccCHHHHhhCCc---cEeeCCCccHH--HHHhcchhcccCCch
Q psy11770 424 LARSS--PSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADV---GFAMGITGTDV--AKEASDIILTDDNFS 495 (668)
Q Consensus 424 ~~r~~--p~~K~~iv~~l~~~~~~~~-~~~v~~iGDg~ND~~mlk~A~v---GIam~~~~~~~--ak~~ad~vl~~~~~~ 495 (668)
.+... ...|..+++.+.++ ++.. .+.+++|||+.||+.|.+.||+ +|++| ++... .+..+|+++. ++.
T Consensus 158 ~~~~~~~~kp~~~~~~~~~~~-~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ad~v~~--~~~ 233 (240)
T 3sd7_A 158 GSNLDGTRVNKNEVIQYVLDL-CNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG-YGSFEEISESEPTYIVE--NVE 233 (240)
T ss_dssp EECTTSCCCCHHHHHHHHHHH-HTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SCCHHHHHHHCCSEEES--SST
T ss_pred eccccCCCCCCHHHHHHHHHH-cCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCC-CCCHHHHhhcCCCEEEC--CHH
Confidence 11111 23456666666554 5788 8999999999999999999998 78777 44433 3578999988 677
Q ss_pred HHHHHH
Q psy11770 496 SIVKAV 501 (668)
Q Consensus 496 ~i~~~l 501 (668)
.+.++|
T Consensus 234 el~~~l 239 (240)
T 3sd7_A 234 SIKDIL 239 (240)
T ss_dssp THHHHH
T ss_pred HHHHHh
Confidence 776654
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.47 E-value=1.1e-07 Score=94.65 Aligned_cols=54 Identities=19% Similarity=0.310 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcC----CccCHHHHhhCCc-cEeeCCCccHHHHHhcchhc
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKADV-GFAMGITGTDVAKEASDIIL 489 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGD----g~ND~~mlk~A~v-GIam~~~~~~~ak~~ad~vl 489 (668)
+|...++.+ ++...+.|+++|| |.||.+||+.|+. |++|| |+.+.+|+.||+|.
T Consensus 188 ~Kg~al~~l----~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 188 DKRYCLRHV----ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLFS 246 (246)
T ss_dssp SGGGGGGGT----TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHCC
T ss_pred chHHHHHHH----hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhcC
Confidence 688777776 4678899999999 9999999999988 99999 99999999999873
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.47 E-value=9.5e-08 Score=93.15 Aligned_cols=124 Identities=12% Similarity=0.202 Sum_probs=90.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+....
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 149 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--LISVDEVR------------------------ 149 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE--EEEGGGTT------------------------
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce--eEehhhcc------------------------
Confidence 5679999999999999999999999999999999999998432111 11111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEee----CCCccHHHHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM----GITGTDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam----~~~~~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
....|..+++.+.++ ++...+.+++|||+.||+.|.+.||+++++ + ++.+..+..+|+++. ++..+.+
T Consensus 150 ----~~kp~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~el~~ 221 (230)
T 3um9_A 150 ----LFKPHQKVYELAMDT-LHLGESEILFVSCNSWDATGAKYFGYPVCWINRSN-GVFDQLGVVPDIVVS--DVGVLAS 221 (230)
T ss_dssp ----CCTTCHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTS-CCCCCSSCCCSEEES--SHHHHHH
T ss_pred ----cCCCChHHHHHHHHH-hCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCC-CccccccCCCcEEeC--CHHHHHH
Confidence 111233444444433 578889999999999999999999999998 4 455555678899887 6777776
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
++
T Consensus 222 ~l 223 (230)
T 3um9_A 222 RF 223 (230)
T ss_dssp TC
T ss_pred HH
Confidence 55
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.46 E-value=7.9e-08 Score=91.57 Aligned_cols=118 Identities=16% Similarity=0.135 Sum_probs=82.2
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.+++.+.++.|++.|++++++|+....... ..+.+|+...-+ .++.+.+.
T Consensus 86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~--~~~~~~~~-------------------------- 136 (207)
T 2go7_A 86 LMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT--EILTSQSG-------------------------- 136 (207)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE--EEECGGGC--------------------------
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee--eEEecCcC--------------------------
Confidence 5799999999999999999999999988877 778888732110 01111100
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc-EeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG-Iam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
....|. ...++.+.++ ++...+.++++||+.||++|++.||++ ++|+ ++. . .||+++. ++..+.+++
T Consensus 137 ~~~Kp~--~~~~~~~~~~-~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 137 FVRKPS--PEAATYLLDK-YQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp CCCTTS--SHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECS--STTHHHHHT
T ss_pred CCCCCC--cHHHHHHHHH-hCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeC--CHHHHHHHH
Confidence 000111 2333333332 478888999999999999999999997 7788 666 3 6898886 566666554
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.45 E-value=2.3e-07 Score=92.88 Aligned_cols=127 Identities=14% Similarity=0.156 Sum_probs=88.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.....+. ++.+...
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~------------------------- 156 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF-LVTPDDV------------------------- 156 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC-CBCGGGS-------------------------
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHh-eecCCcc-------------------------
Confidence 45789999999999999999999999988888888887763221011 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCC-CEEEEEcCCccCHHHHhhCC---ccEeeCCCc----------------------
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKAD---VGFAMGITG---------------------- 477 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~-~~v~~iGDg~ND~~mlk~A~---vGIam~~~~---------------------- 477 (668)
. ....|...++.+.++ ++... +.+++|||+.||++|++.|| ++|++| ++
T Consensus 157 -~--~~kp~~~~~~~~~~~-lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T 1swv_A 157 -P--AGRPYPWMCYKNAME-LGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIE 231 (267)
T ss_dssp -S--CCTTSSHHHHHHHHH-HTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHH
T ss_pred -C--CCCCCHHHHHHHHHH-hCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhh
Confidence 0 011233444444333 57777 89999999999999999999 677777 54
Q ss_pred --cHHHHHh-cchhcccCCchHHHHHHHH
Q psy11770 478 --TDVAKEA-SDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 478 --~~~ak~~-ad~vl~~~~~~~i~~~l~~ 503 (668)
.+..++. ||+++. ++..+.+++..
T Consensus 232 ~~~~~~~~~~ad~v~~--~~~el~~~l~~ 258 (267)
T 1swv_A 232 VVRNRFVENGAHFTIE--TMQELESVMEH 258 (267)
T ss_dssp HHHHHHHHTTCSEEES--SGGGHHHHHHH
T ss_pred hHHHHHHhcCCceecc--CHHHHHHHHHH
Confidence 3344454 899986 78888877753
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.44 E-value=4.2e-07 Score=88.73 Aligned_cols=125 Identities=13% Similarity=0.070 Sum_probs=85.4
Q ss_pred CCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 345 VRPEVPEAIKKCQRA-GITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 345 l~~~~~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+.|++.+.++.|++. |+++.++|+.....+....+.+|+...-.. ...+.+.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 146 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GAFADDA------------------------- 146 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EECTTTC-------------------------
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc--ceecCCC-------------------------
Confidence 579999999999999 999999999999988888998888432111 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcC--CCCCEEEEEcCCccCHHHHhhCC---ccEeeCCCccHHHHHh--cchhcccCCchH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKIS--AGREVVAVTGDGTNDGPALKKAD---VGFAMGITGTDVAKEA--SDIILTDDNFSS 496 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~--~~~~~v~~iGDg~ND~~mlk~A~---vGIam~~~~~~~ak~~--ad~vl~~~~~~~ 496 (668)
...+..+..+++.+.++ ++ ...+.++++||+.||++|.+.|| ++|++| ++....... +|+++. ++..
T Consensus 147 --~~~~k~~~~~~~~~~~~-lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~--~~~e 220 (234)
T 2hcf_A 147 --LDRNELPHIALERARRM-TGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFK--NFAE 220 (234)
T ss_dssp --SSGGGHHHHHHHHHHHH-HCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEES--CSCC
T ss_pred --cCccchHHHHHHHHHHH-hCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeC--CHHh
Confidence 00122334444444333 46 67889999999999999999999 566666 444433332 888887 5666
Q ss_pred HHHHHH
Q psy11770 497 IVKAVM 502 (668)
Q Consensus 497 i~~~l~ 502 (668)
+.+++.
T Consensus 221 l~~~l~ 226 (234)
T 2hcf_A 221 TDEVLA 226 (234)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666553
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.44 E-value=4.2e-07 Score=88.75 Aligned_cols=124 Identities=17% Similarity=0.186 Sum_probs=91.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++. +++.++|+.....+....+.+|+...-+. ++.+.+..
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--~~~~~~~~------------------------ 152 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS--ITTSEEAG------------------------ 152 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEHHHHT------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce--eEeccccC------------------------
Confidence 4679999999999999 99999999999999999999998432221 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCC---ccEeeCCCccHHHHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKAD---VGFAMGITGTDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~---vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
... .|..+++.+.++ ++...+.+++|||+. ||+.|.+.|| +++++| ++.+..+..+|+++. ++..+.+
T Consensus 153 --~~k--p~~~~~~~~~~~-~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~ 224 (234)
T 3u26_A 153 --FFK--PHPRIFELALKK-AGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIK 224 (234)
T ss_dssp --BCT--TSHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHH
T ss_pred --CCC--cCHHHHHHHHHH-cCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHH
Confidence 011 223334433333 578889999999997 9999999999 688888 777777779999998 7888887
Q ss_pred HHH
Q psy11770 500 AVM 502 (668)
Q Consensus 500 ~l~ 502 (668)
++.
T Consensus 225 ~l~ 227 (234)
T 3u26_A 225 IVD 227 (234)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.1e-07 Score=96.45 Aligned_cols=128 Identities=9% Similarity=0.020 Sum_probs=90.2
Q ss_pred CCCCchHHHHHHHHHcCC--EEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 344 PVRPEVPEAIKKCQRAGI--TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI--~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
++.|++.+.++.|++.|+ +++++|+.....+....+.+|+...-+.++ .+.... .
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~--~~~~~~--------------------~- 198 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLT--YCDYSR--------------------T- 198 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEE--CCCCSS--------------------C-
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEE--EeccCC--------------------C-
Confidence 467899999999999999 999999999999999999999853222111 000000 0
Q ss_pred EEEEecCHhhHHHHHHHHHHhhcCCCC-CEEEEEcCCccCHHHHhhCCccEeeCCCccHHHH------HhcchhcccCCc
Q psy11770 422 RVLARSSPSDKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK------EASDIILTDDNF 494 (668)
Q Consensus 422 ~v~~r~~p~~K~~iv~~l~~~~~~~~~-~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak------~~ad~vl~~~~~ 494 (668)
. ...+..|..+++.+.++ ++... +.+++|||+.||+.|.+.||+|.+|+ ++.+..+ ..||+++. ++
T Consensus 199 -~--~~~~Kp~~~~~~~~~~~-lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~ad~vi~--sl 271 (282)
T 3nuq_A 199 -D--TLVCKPHVKAFEKAMKE-SGLARYENAYFIDDSGKNIETGIKLGMKTCIH-LVENEVNEILGQTPEGAIVIS--DI 271 (282)
T ss_dssp -S--SCCCTTSHHHHHHHHHH-HTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE-ECSCCC----CCCCTTCEEES--SG
T ss_pred -c--ccCCCcCHHHHHHHHHH-cCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE-EcCCccccccccCCCCCEEeC--CH
Confidence 0 01223455566655444 58887 89999999999999999999999988 5444322 36788887 66
Q ss_pred hHHHHHH
Q psy11770 495 SSIVKAV 501 (668)
Q Consensus 495 ~~i~~~l 501 (668)
..+.+++
T Consensus 272 ~el~~~l 278 (282)
T 3nuq_A 272 LELPHVV 278 (282)
T ss_dssp GGGGGTS
T ss_pred HHHHHHh
Confidence 6666544
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.44 E-value=2.7e-07 Score=90.04 Aligned_cols=124 Identities=12% Similarity=0.131 Sum_probs=87.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDN---INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~---~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+...-+. ++.+.+..
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~---------------------- 155 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK--TFFADEVL---------------------- 155 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE--EEEHHHHT----------------------
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh--heeccccC----------------------
Confidence 47999999999999999999999999 8888888888887432211 11111110
Q ss_pred EEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCccEee---CCCccHHHHHhcchhcccCCchHH
Q psy11770 422 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAM---GITGTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 422 ~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vGIam---~~~~~~~ak~~ad~vl~~~~~~~i 497 (668)
...| +..+++.+.++ ++...+.+++|||+. ||+.|++.||+++++ + ++.+..+..+|+++. ++..+
T Consensus 156 ----~~kp--~~~~~~~~~~~-lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~--~~~el 225 (235)
T 2om6_A 156 ----SYKP--RKEMFEKVLNS-FEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIP--SIANL 225 (235)
T ss_dssp ----CCTT--CHHHHHHHHHH-TTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEES--SGGGH
T ss_pred ----CCCC--CHHHHHHHHHH-cCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHh--hHHHH
Confidence 0111 23344444333 578889999999999 999999999999998 4 333333456788776 67777
Q ss_pred HHHHH
Q psy11770 498 VKAVM 502 (668)
Q Consensus 498 ~~~l~ 502 (668)
.+++.
T Consensus 226 ~~~l~ 230 (235)
T 2om6_A 226 KDVIE 230 (235)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.6e-07 Score=85.76 Aligned_cols=124 Identities=14% Similarity=0.173 Sum_probs=83.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcC--CccCCCceEEe-e-hhhHHHhhhc
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNI---------------NTARSIATKCG--IVKPGEDYLIL-E-GKEFNRRVRD 404 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~g--i~~~~~~~i~~-~-g~~~~~~~~~ 404 (668)
++.|++.++|+.|+++|+++.++|+.+. ..+....+++| +. .++.. . +.+
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~----~~~~~~~~~~~------- 95 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVD----AIFMCPHGPDD------- 95 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCC----EEEEECCCTTS-------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCcee----EEEEcCCCCCC-------
Confidence 5789999999999999999999999985 45566666676 31 11100 0 000
Q ss_pred CchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC---ccEeeCCCccHHH
Q psy11770 405 NNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD---VGFAMGITGTDVA 481 (668)
Q Consensus 405 ~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~---vGIam~~~~~~~a 481 (668)
.+....| +..+++.+.++ ++...+.+++|||+.||+.|.+.|| ++|+.| ++....
T Consensus 96 ------------------~~~~~KP--~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~ 153 (179)
T 3l8h_A 96 ------------------GCACRKP--LPGMYRDIARR-YDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTL 153 (179)
T ss_dssp ------------------CCSSSTT--SSHHHHHHHHH-HTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHH
T ss_pred ------------------CCCCCCC--CHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-Ccchhh
Confidence 0000112 22334433333 5788899999999999999999999 477777 555544
Q ss_pred H----HhcchhcccCCchHHHHHHH
Q psy11770 482 K----EASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 482 k----~~ad~vl~~~~~~~i~~~l~ 502 (668)
. ..+|+++. ++..+.+++.
T Consensus 154 ~~~~~~~~d~v~~--~l~el~~~l~ 176 (179)
T 3l8h_A 154 AQGGLPEGTRVCE--DLAAVAEQLL 176 (179)
T ss_dssp HHCCCCTTEEEES--SHHHHHHHHH
T ss_pred hhcccCCCcEEec--CHHHHHHHHH
Confidence 4 45788888 7888877764
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.44 E-value=2.8e-07 Score=89.90 Aligned_cols=131 Identities=16% Similarity=0.232 Sum_probs=89.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|++++++||.....+..+.+++|+.. ..++... -.+. ....+
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--~~~f~~~-~~~~-------------------~~~~~ 143 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA--TNVFANR-LKFY-------------------FNGEY 143 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG--GGEEEEC-EEEC-------------------TTSCE
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCc--ccEEeee-EEEc-------------------CCCcE
Confidence 578999999999999999999999999999999999999842 0111000 0000 00001
Q ss_pred EEec------CHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc-cHHHHHhcchhcccCCchH
Q psy11770 424 LARS------SPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG-TDVAKEASDIILTDDNFSS 496 (668)
Q Consensus 424 ~~r~------~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~-~~~ak~~ad~vl~~~~~~~ 496 (668)
.+.- .+..|..+++.+.++ ++. +.++++||+.||+.+.+.||++|+++... .+.....+|+++. ++..
T Consensus 144 ~~~~~~~~~~~~~~Kp~~~~~~~~~-~~~--~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~e 218 (225)
T 1nnl_A 144 AGFDETQPTAESGGKGKVIKLLKEK-FHF--KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 218 (225)
T ss_dssp EEECTTSGGGSTTHHHHHHHHHHHH-HCC--SCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred ecCCCCCcccCCCchHHHHHHHHHH-cCC--CcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHH
Confidence 1111 124677777766554 343 67999999999999999999988887322 2344567888887 5666
Q ss_pred HHHHH
Q psy11770 497 IVKAV 501 (668)
Q Consensus 497 i~~~l 501 (668)
+.+++
T Consensus 219 l~~~l 223 (225)
T 1nnl_A 219 LLGEL 223 (225)
T ss_dssp GCC--
T ss_pred HHHHH
Confidence 65444
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.43 E-value=4.1e-07 Score=91.37 Aligned_cols=127 Identities=10% Similarity=0.021 Sum_probs=90.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+....-+. ++.+...
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~------------------------- 164 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPAS-TVFATDV------------------------- 164 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSE-EECGGGS-------------------------
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCce-EecHHhc-------------------------
Confidence 46789999999999999999999999999988888888874321111 1111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCC-CEEEEEcCCccCHHHHhhCC---ccEeeCCC-----------------------
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKAD---VGFAMGIT----------------------- 476 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~-~~v~~iGDg~ND~~mlk~A~---vGIam~~~----------------------- 476 (668)
.....|...++.+.++ ++... +.+++|||+.||+.|.+.|| ++|++|.+
T Consensus 165 ---~~~kp~~~~~~~~~~~-lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
T 3iru_A 165 ---VRGRPFPDMALKVALE-LEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQH 240 (277)
T ss_dssp ---SSCTTSSHHHHHHHHH-HTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHH
T ss_pred ---CCCCCCHHHHHHHHHH-cCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhh
Confidence 0112334445544443 58888 89999999999999999999 66777732
Q ss_pred ccHHHHHh-cchhcccCCchHHHHHHH
Q psy11770 477 GTDVAKEA-SDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 477 ~~~~ak~~-ad~vl~~~~~~~i~~~l~ 502 (668)
+.+..++. +|+++. ++..+.++|.
T Consensus 241 ~~~~l~~~~ad~v~~--~~~el~~~l~ 265 (277)
T 3iru_A 241 AEQRLFNAGAHYVID--SVADLETVIT 265 (277)
T ss_dssp HHHHHHHHTCSEEES--SGGGTHHHHH
T ss_pred hHHHHhhCCCCEEec--CHHHHHHHHH
Confidence 23344444 899998 7888888775
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.41 E-value=3.6e-07 Score=88.83 Aligned_cols=120 Identities=8% Similarity=0.048 Sum_probs=87.0
Q ss_pred CCCCchHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAG-ITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aG-I~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.+++.+.++.|++.| +++.++|+........+.+.+|+...-+ .
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------~ 151 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------H 151 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS---------------------------------E
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh---------------------------------e
Confidence 46789999999999999 9999999999888888889888842111 1
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCccEeeCC------CccHHHHHhc-chhcccCCc
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGI------TGTDVAKEAS-DIILTDDNF 494 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vGIam~~------~~~~~ak~~a-d~vl~~~~~ 494 (668)
+++... .|...++.+.++ ++...+.+++|||+. ||+.|.+.||+++++-. ++.+..+..+ |+++. ++
T Consensus 152 ~~~~~k--pk~~~~~~~~~~-lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l 226 (234)
T 3ddh_A 152 IEVMSD--KTEKEYLRLLSI-LQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RL 226 (234)
T ss_dssp EEEESC--CSHHHHHHHHHH-HTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SG
T ss_pred eeecCC--CCHHHHHHHHHH-hCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cH
Confidence 223223 356666666554 688899999999996 99999999999888620 3333323344 88887 67
Q ss_pred hHHHHHH
Q psy11770 495 SSIVKAV 501 (668)
Q Consensus 495 ~~i~~~l 501 (668)
..+.++|
T Consensus 227 ~el~~~l 233 (234)
T 3ddh_A 227 DDLLSLL 233 (234)
T ss_dssp GGHHHHC
T ss_pred HHHHHhc
Confidence 7776543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.4e-07 Score=92.14 Aligned_cols=126 Identities=8% Similarity=0.023 Sum_probs=93.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.+ +.+.+..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~~------------------------ 152 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHV--LSVDAVR------------------------ 152 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEE--EEGGGTT------------------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEE--EEecccC------------------------
Confidence 46789999999999999999999999999999999999985322211 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEee----CCCccHHHHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM----GITGTDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam----~~~~~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
....|..+++.+.++ ++...+.+++|||+.||+.|.+.||+++++ + ++.+..+..+|+++. ++..+.+
T Consensus 153 ----~~kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~ 224 (233)
T 3umb_A 153 ----LYKTAPAAYALAPRA-FGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQ 224 (233)
T ss_dssp ----CCTTSHHHHTHHHHH-HTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHH
T ss_pred ----CCCcCHHHHHHHHHH-hCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHH
Confidence 011223333333332 477889999999999999999999999998 5 566666778999998 7888888
Q ss_pred HHHH
Q psy11770 500 AVMW 503 (668)
Q Consensus 500 ~l~~ 503 (668)
++..
T Consensus 225 ~l~~ 228 (233)
T 3umb_A 225 FVQA 228 (233)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8764
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.37 E-value=6e-07 Score=87.67 Aligned_cols=119 Identities=15% Similarity=0.122 Sum_probs=83.3
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.+ +.
T Consensus 104 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i--------------------------------~~ 151 (231)
T 3kzx_A 104 LNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSI--------------------------------IG 151 (231)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------EE
T ss_pred ECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeE--------------------------------Ec
Confidence 5799999999999999999999999999999999999984321111 11
Q ss_pred EecCH--hhHHHHHHHHHHhhcCCCCC-EEEEEcCCccCHHHHhhCCc-cEeeCCCccHHHHHhcchhcccCCchHHHHH
Q psy11770 425 ARSSP--SDKYTLVKGMIDSKISAGRE-VVAVTGDGTNDGPALKKADV-GFAMGITGTDVAKEASDIILTDDNFSSIVKA 500 (668)
Q Consensus 425 ~r~~p--~~K~~iv~~l~~~~~~~~~~-~v~~iGDg~ND~~mlk~A~v-GIam~~~~~~~ak~~ad~vl~~~~~~~i~~~ 500 (668)
+...+ ..|...++.+.++ ++...+ .+++|||+.||+.|.+.||+ +|.++ ++.+ ..+|+++. ++..+.++
T Consensus 152 ~~~~~~~Kp~~~~~~~~~~~-lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~ 224 (231)
T 3kzx_A 152 SGDTGTIKPSPEPVLAALTN-INIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNF 224 (231)
T ss_dssp ETSSSCCTTSSHHHHHHHHH-HTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHH
T ss_pred ccccCCCCCChHHHHHHHHH-cCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHH
Confidence 11111 1222333333333 577787 89999999999999999996 67777 5544 35677776 78888777
Q ss_pred HH
Q psy11770 501 VM 502 (668)
Q Consensus 501 l~ 502 (668)
|.
T Consensus 225 l~ 226 (231)
T 3kzx_A 225 IC 226 (231)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=2.5e-07 Score=91.97 Aligned_cols=52 Identities=25% Similarity=0.271 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcC----CccCHHHHhhCC-ccEeeCCCccHHHHHhcchh
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKAD-VGFAMGITGTDVAKEASDII 488 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGD----g~ND~~mlk~A~-vGIam~~~~~~~ak~~ad~v 488 (668)
+|...++.|. + ..+.|+++|| |.||.+||+.|+ +|++|+ |+.+.++...++.
T Consensus 187 ~Kg~al~~L~----~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 187 DKTYCLQFVE----D-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKII 243 (246)
T ss_dssp SGGGGGGGTT----T-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHHH
T ss_pred CHHHHHHHHH----c-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHHh
Confidence 6777777663 3 6789999999 699999999996 899999 9999888766554
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.35 E-value=5.4e-07 Score=89.78 Aligned_cols=128 Identities=12% Similarity=0.092 Sum_probs=88.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-+.. ++.+.+.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-i~~~~~~------------------------- 163 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEH-IYDPSWV------------------------- 163 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSC-EECGGGG-------------------------
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccce-EEeHhhc-------------------------
Confidence 35789999999999999999999999999999999999883211110 0111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc-EeeCCCc-------cHHH-HHhcchhcccCCc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITG-------TDVA-KEASDIILTDDNF 494 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG-Iam~~~~-------~~~a-k~~ad~vl~~~~~ 494 (668)
. .....|..+++.+.++ ++...+.+++|||+.||+.|.+.||++ +.+. .+ .+.. +..+|+++. ++
T Consensus 164 -~-~~~Kp~~~~~~~~~~~-lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l 237 (259)
T 4eek_A 164 -G-GRGKPHPDLYTFAAQQ-LGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SH 237 (259)
T ss_dssp -T-TCCTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SH
T ss_pred -C-cCCCCChHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CH
Confidence 0 0111223344444433 588889999999999999999999998 4443 33 2333 345899988 78
Q ss_pred hHHHHHHHH
Q psy11770 495 SSIVKAVMW 503 (668)
Q Consensus 495 ~~i~~~l~~ 503 (668)
..+.++|..
T Consensus 238 ~el~~~l~~ 246 (259)
T 4eek_A 238 AELRAALAE 246 (259)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 998888864
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.33 E-value=2.2e-07 Score=89.00 Aligned_cols=122 Identities=13% Similarity=0.148 Sum_probs=85.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 142 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI--VLSGEEFK------------------------ 142 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGCS------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee--Eeeccccc------------------------
Confidence 3678999999999999999999999999999999999998432221 11111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc-cHHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG-TDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~-~~~ak~~ad~vl~~~~~~~i~ 498 (668)
... .|...++.+.++ ++...+.+++|||+.||+.|.+.||+++++..++ ....+..+|+++. ++..+.
T Consensus 143 --~~k--p~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 143 --ESK--PNPEIYLTALKQ-LNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp --SCT--TSSHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred --CCC--CChHHHHHHHHH-cCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 011 123334443333 5788899999999999999999999988876332 3333467888887 555543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.31 E-value=7.2e-07 Score=86.06 Aligned_cols=120 Identities=13% Similarity=0.159 Sum_probs=88.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++ |+++.++|+.+...+..+.+++|+...-+. .+
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~--------------------------------i~ 130 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDG--------------------------------IY 130 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSE--------------------------------EE
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheee--------------------------------ee
Confidence 357999999999999 999999999998888888899998432111 11
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc---cEeeCCCc-cHHHHH-hcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITG-TDVAKE-ASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v---GIam~~~~-~~~ak~-~ad~vl~~~~~~~i~ 498 (668)
.+...+..|..+++.+.++ ++..++.+++|||+.||+.|.+.||+ +|++| ++ .+..+. .+|+++. ++..+.
T Consensus 131 ~~~~~~Kp~p~~~~~~~~~-lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~--~~~el~ 206 (210)
T 2ah5_A 131 GSSPEAPHKADVIHQALQT-HQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAH--KPLEVL 206 (210)
T ss_dssp EECSSCCSHHHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEES--STTHHH
T ss_pred cCCCCCCCChHHHHHHHHH-cCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEEC--CHHHHH
Confidence 2221223456666665544 68888999999999999999999998 77777 54 344443 5888887 566655
Q ss_pred HH
Q psy11770 499 KA 500 (668)
Q Consensus 499 ~~ 500 (668)
++
T Consensus 207 ~~ 208 (210)
T 2ah5_A 207 AY 208 (210)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.30 E-value=2.4e-06 Score=84.09 Aligned_cols=125 Identities=13% Similarity=0.135 Sum_probs=86.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 147 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEH--VIISDFEG------------------------ 147 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSE--EEEGGGGT------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccE--EEEeCCCC------------------------
Confidence 4679999999999999999999999999888899999998432111 11111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCccEee---CCCccHHHHH---hcchhcccCCchH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAM---GITGTDVAKE---ASDIILTDDNFSS 496 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vGIam---~~~~~~~ak~---~ad~vl~~~~~~~ 496 (668)
... .|..+++.+.++ ++...+.+++|||+. ||+.|.+.||++++. | .+...... .+|+++. ++..
T Consensus 148 --~~K--p~~~~~~~~~~~-~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~e 219 (241)
T 2hoq_A 148 --VKK--PHPKIFKKALKA-FNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLES 219 (241)
T ss_dssp --CCT--TCHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTH
T ss_pred --CCC--CCHHHHHHHHHH-cCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHH
Confidence 011 122344444333 577888999999998 999999999987553 4 33344333 6888877 6777
Q ss_pred HHHHHH
Q psy11770 497 IVKAVM 502 (668)
Q Consensus 497 i~~~l~ 502 (668)
+.+++.
T Consensus 220 l~~~l~ 225 (241)
T 2hoq_A 220 LLEVLA 225 (241)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776664
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.29 E-value=6.8e-07 Score=88.12 Aligned_cols=125 Identities=13% Similarity=0.061 Sum_probs=84.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCC-ceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE-DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~-~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.+++.+.++.|++.|+++.++|+.....+....+. |+...-. +. ++.+.+.
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~-i~~~~~~------------------------ 162 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKEL-MVTAFDV------------------------ 162 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGG-EECTTTC------------------------
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcce-EEeHHhC------------------------
Confidence 4679999999999999999999999987777777766 7742210 11 1111110
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE-eeCCCccHH----HHHhcchhcccCCchHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMGITGTDV----AKEASDIILTDDNFSSI 497 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI-am~~~~~~~----ak~~ad~vl~~~~~~~i 497 (668)
. .+..|..+++.+.++ ++...+.+++|||+.||+.|.+.||++. .+. ++... .+..||+++. ++..+
T Consensus 163 --~--~~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el 234 (243)
T 3qxg_A 163 --K--YGKPNPEPYLMALKK-GGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTL 234 (243)
T ss_dssp --S--SCTTSSHHHHHHHHH-TTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHH
T ss_pred --C--CCCCChHHHHHHHHH-cCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHH
Confidence 0 111223344444333 5888899999999999999999999844 444 43322 2346899987 78888
Q ss_pred HHHHH
Q psy11770 498 VKAVM 502 (668)
Q Consensus 498 ~~~l~ 502 (668)
.++|.
T Consensus 235 ~~~l~ 239 (243)
T 3qxg_A 235 CDSWD 239 (243)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77764
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.28 E-value=4.5e-07 Score=88.37 Aligned_cols=125 Identities=18% Similarity=0.164 Sum_probs=85.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+.
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--i~~~~~~------------------------- 135 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--IVGGDTF------------------------- 135 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECTTSS-------------------------
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE--EEecCcC-------------------------
Confidence 4689999999999999999999999999989999999997422111 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc-EeeCC-CccHHHHHhcchhcccCCchHHHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGI-TGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG-Iam~~-~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
..+..|..+++.+.++ ++..++.+++|||+.||++|.+.||++ |++.. .+.+.. ..+|+++. ++..+.+++
T Consensus 136 ---~~~Kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l 208 (222)
T 2nyv_A 136 ---GEKKPSPTPVLKTLEI-LGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLM 208 (222)
T ss_dssp ---CTTCCTTHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHH
T ss_pred ---CCCCCChHHHHHHHHH-hCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHH
Confidence 0111233334433332 477888999999999999999999987 55441 222222 56788876 678887776
Q ss_pred H
Q psy11770 502 M 502 (668)
Q Consensus 502 ~ 502 (668)
.
T Consensus 209 ~ 209 (222)
T 2nyv_A 209 D 209 (222)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.7e-06 Score=85.30 Aligned_cols=122 Identities=11% Similarity=0.175 Sum_probs=85.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.|++.+.++.|+++|+++.++|+.....+..+.+.+|+. .-+ .+ +.+.+.
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~-~~-~~~~~~-------------------------- 161 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD-FA-LGEKSG-------------------------- 161 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS-EE-EEECTT--------------------------
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee-EE-EecCCC--------------------------
Confidence 5689999999999999999999999988888888888873 211 11 111110
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc---EeeCCCcc-HHHH-HhcchhcccCCchHHHH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG---FAMGITGT-DVAK-EASDIILTDDNFSSIVK 499 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG---Iam~~~~~-~~ak-~~ad~vl~~~~~~~i~~ 499 (668)
..+..|..++..+.++ ++...+.+++|||+.||+.|.+.||+. |++| ++. +..+ ..+|+++. ++..+..
T Consensus 162 --~~~Kp~p~~~~~~~~~-l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~~--~~~el~~ 235 (240)
T 2hi0_A 162 --IRRKPAPDMTSECVKV-LGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIVD--TAEKLEE 235 (240)
T ss_dssp --SCCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEEC--SHHHHHH
T ss_pred --CCCCCCHHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEEC--CHHHHHH
Confidence 0122333444444333 578889999999999999999999984 5555 333 3343 36888886 6777665
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
.+
T Consensus 236 ~l 237 (240)
T 2hi0_A 236 AI 237 (240)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.26 E-value=1e-06 Score=86.76 Aligned_cols=125 Identities=14% Similarity=0.081 Sum_probs=81.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCC-ceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE-DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~-~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.+++.+.++.|++.|+++.++|+.....+....+. |+...-. +. ++.+.+.
T Consensus 108 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~-~~~~~~~------------------------ 161 (247)
T 3dv9_A 108 ERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANL-MVTAFDV------------------------ 161 (247)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGG-EECGGGC------------------------
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCe-EEecccC------------------------
Confidence 5679999999999999999999999988877777777 7742210 11 1111110
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc-EeeCCCcc--HH--HHHhcchhcccCCchHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGT--DV--AKEASDIILTDDNFSSI 497 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG-Iam~~~~~--~~--ak~~ad~vl~~~~~~~i 497 (668)
. .+..|..+++.+.++ ++...+.+++|||+.||+.|.+.||++ +.+. ++. .. .+..||+++. ++..+
T Consensus 162 --~--~~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--~~~el 233 (247)
T 3dv9_A 162 --K--YGKPNPEPYLMALKK-GGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFH--SMPDF 233 (247)
T ss_dssp --S--SCTTSSHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEES--SHHHH
T ss_pred --C--CCCCCCHHHHHHHHH-cCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEEC--CHHHH
Confidence 0 111223344444333 588889999999999999999999965 3333 332 22 2237999987 78888
Q ss_pred HHHHH
Q psy11770 498 VKAVM 502 (668)
Q Consensus 498 ~~~l~ 502 (668)
.+++.
T Consensus 234 ~~~l~ 238 (247)
T 3dv9_A 234 NKNWE 238 (247)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2e-06 Score=83.26 Aligned_cols=136 Identities=17% Similarity=0.182 Sum_probs=84.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDN---------------INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 408 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~---------------~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~ 408 (668)
++.|++.++|+.|+++|+++.++|+.. ...+..+.+++|+. -.. +...+........
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~-~~~~~~~~~~~~~----- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDG-IYYCPHHPQGSVE----- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSE-EEEECCBTTCSSG-----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEE-EEECCcCCCCccc-----
Confidence 678999999999999999999999999 46677788888873 111 1111100000000
Q ss_pred hhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc----EeeCCCccHHHHHh
Q psy11770 409 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG----FAMGITGTDVAKEA 484 (668)
Q Consensus 409 ~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG----Iam~~~~~~~ak~~ 484 (668)
.. .. ......| |..+++.+.++ ++...+.++||||+.||+.+.+.||+. |..|....+.....
T Consensus 122 -------~~-~~--~~~~~KP--~p~~~~~~~~~-lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~ 188 (211)
T 2gmw_A 122 -------EF-RQ--VCDCRKP--HPGMLLSARDY-LHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENA 188 (211)
T ss_dssp -------GG-BS--CCSSSTT--SCHHHHHHHHH-HTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHH
T ss_pred -------cc-Cc--cCcCCCC--CHHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCC
Confidence 00 00 0000111 22333333322 477788999999999999999999954 43442223334456
Q ss_pred cchhcccCCchHHHHHHH
Q psy11770 485 SDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 485 ad~vl~~~~~~~i~~~l~ 502 (668)
+|+++. ++..+.+++.
T Consensus 189 ~d~vi~--~l~el~~~l~ 204 (211)
T 2gmw_A 189 ADWVLN--SLADLPQAIK 204 (211)
T ss_dssp CSEEES--CGGGHHHHHH
T ss_pred CCEEeC--CHHHHHHHHH
Confidence 899887 6888877664
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.4e-06 Score=85.18 Aligned_cols=123 Identities=7% Similarity=0.061 Sum_probs=89.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+ .|++++++|+.....+....+.+|+...-+.+ +.+.+..
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~--~~~~~~~------------------------ 159 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKI--ILSEDLG------------------------ 159 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE--EEGGGTT------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeE--EEeccCC------------------------
Confidence 46789999999999 99999999999999999999999984322211 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCccEeeCCCccH--HHHHhcchhcccCCchHHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITGTD--VAKEASDIILTDDNFSSIVKA 500 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vGIam~~~~~~--~ak~~ad~vl~~~~~~~i~~~ 500 (668)
....|..+++.+.++ ++...+.+++|||+. ||+.|.+.||++++|. +... ..+..+|+++. ++..+..+
T Consensus 160 ----~~kp~~~~~~~~~~~-lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~d~vi~--sl~e~~~~ 231 (240)
T 3qnm_A 160 ----VLKPRPEIFHFALSA-TQSELRESLMIGDSWEADITGAHGVGMHQAFY-NVTERTVFPFQPTYHIH--SLKELMNL 231 (240)
T ss_dssp ----CCTTSHHHHHHHHHH-TTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE-CCSCCCCCSSCCSEEES--STHHHHHH
T ss_pred ----CCCCCHHHHHHHHHH-cCCCcccEEEECCCchHhHHHHHHcCCeEEEE-cCCCCCCcCCCCceEEC--CHHHHHHH
Confidence 112234455554443 588889999999995 9999999999999998 4443 45567899888 67777665
Q ss_pred H
Q psy11770 501 V 501 (668)
Q Consensus 501 l 501 (668)
.
T Consensus 232 ~ 232 (240)
T 3qnm_A 232 L 232 (240)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.23 E-value=2.6e-06 Score=83.85 Aligned_cols=139 Identities=16% Similarity=0.171 Sum_probs=88.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.|+.|+++|+++.++|+.....+..+.+ |+... +.++..+ ..... ..... ...+ +.-..
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~-~~~~~------~~~~~-~~~k--p~p~~ 143 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNH-ASFDN------DYIHI-DWPH--SCKGT 143 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEE-EECSS------SBCEE-ECTT--CCCTT
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeee-eEEcC------CceEE-ecCC--CCccc
Confidence 578999999999999999999999999988888887 76432 2222211 10000 00000 0000 00000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHh--cchhcccCCchHHHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEA--SDIILTDDNFSSIVKAV 501 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~--ad~vl~~~~~~~i~~~l 501 (668)
+.+.....|..+++.+ +..++.++++||+.+|+++.+.||+.++.. ...+..... +|+++. ++..+.+++
T Consensus 144 ~~~~~~~~K~~~~~~~-----~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l 215 (236)
T 2fea_A 144 CSNQCGCCKPSVIHEL-----SEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEI 215 (236)
T ss_dssp CCSCCSSCHHHHHHHH-----CCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHH
T ss_pred cccccCCcHHHHHHHH-----hccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHH
Confidence 0011234677887764 678899999999999999999999988743 222333333 677776 788887776
Q ss_pred HH
Q psy11770 502 MW 503 (668)
Q Consensus 502 ~~ 503 (668)
..
T Consensus 216 ~~ 217 (236)
T 2fea_A 216 EN 217 (236)
T ss_dssp HT
T ss_pred HH
Confidence 53
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=1.4e-06 Score=85.78 Aligned_cols=124 Identities=10% Similarity=0.100 Sum_probs=85.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+. ++.+.+..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 158 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDS--CLSADDLK------------------------ 158 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGTT------------------------
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCE--EEEccccC------------------------
Confidence 4679999999999999999999999999999999999998432221 11111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc---EeeCCCccHHHHHhc-chhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG---FAMGITGTDVAKEAS-DIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG---Iam~~~~~~~ak~~a-d~vl~~~~~~~i~~ 499 (668)
....|..+++.+.++ ++...+.+++|||+.||+.|.+.||+. +..| +..+..+..+ |+++. ++..+.+
T Consensus 159 ----~~Kp~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~ 230 (240)
T 2no4_A 159 ----IYKPDPRIYQFACDR-LGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVN--SLSELWP 230 (240)
T ss_dssp ----CCTTSHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEES--SGGGHHH
T ss_pred ----CCCCCHHHHHHHHHH-cCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeC--CHHHHHH
Confidence 011223334333332 477888999999999999999999955 4445 3333334456 88876 6777776
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
++
T Consensus 231 ~l 232 (240)
T 2no4_A 231 LL 232 (240)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.1e-06 Score=87.11 Aligned_cols=122 Identities=12% Similarity=0.137 Sum_probs=89.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+. -+. ++.+....
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~~-~~~~~~~~------------------------ 170 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WDM-LLCADLFG------------------------ 170 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CSE-ECCHHHHT------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cce-EEeecccc------------------------
Confidence 3578999999999986 999999999999999999999983 111 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCC-----c---cHHH--HHhcchhcccCC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGIT-----G---TDVA--KEASDIILTDDN 493 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~-----~---~~~a--k~~ad~vl~~~~ 493 (668)
....|..+++.+.++ ++...+.+++|||+.||+.|.+.||++++|. + + .+.. +..+|+++. +
T Consensus 171 ----~~kp~~~~~~~~~~~-lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~g~~~~~~l~~~~~ad~v~~--~ 242 (254)
T 3umc_A 171 ----HYKPDPQVYLGACRL-LDLPPQEVMLCAAHNYDLKAARALGLKTAFI-ARPLEYGPGQSQDLAAEQDWDLIAS--D 242 (254)
T ss_dssp ----CCTTSHHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHTTCEEEEE-CCTTTTCTTCCSSSSCSSCCSEEES--S
T ss_pred ----cCCCCHHHHHHHHHH-cCCChHHEEEEcCchHhHHHHHHCCCeEEEE-ecCCccCCCCCcccccCCCCcEEEC--C
Confidence 122344555554443 5888899999999999999999999999998 4 2 2222 567899988 7
Q ss_pred chHHHHHHH
Q psy11770 494 FSSIVKAVM 502 (668)
Q Consensus 494 ~~~i~~~l~ 502 (668)
+..+.++|.
T Consensus 243 l~el~~~l~ 251 (254)
T 3umc_A 243 LLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 888877763
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.22 E-value=7.5e-07 Score=87.02 Aligned_cols=126 Identities=10% Similarity=0.145 Sum_probs=86.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.+ +.+.+..
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~~------------------------ 148 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHL--LSVDPVQ------------------------ 148 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE--EESGGGT------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheE--EEecccC------------------------
Confidence 46799999999999999999999999999999999999984322211 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCC---CccHHHHHhcchhcccCCchHHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI---TGTDVAKEASDIILTDDNFSSIVKA 500 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~---~~~~~ak~~ad~vl~~~~~~~i~~~ 500 (668)
....|..+++.+.++ ++...+.+++|||+.||+.|.+.||+++++-. +..+..+..+|+++. ++..+..+
T Consensus 149 ----~~Kp~~~~~~~~~~~-~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~ 221 (232)
T 1zrn_A 149 ----VYKPDNRVYELAEQA-LGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVEL 221 (232)
T ss_dssp ----CCTTSHHHHHHHHHH-HTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTT
T ss_pred ----CCCCCHHHHHHHHHH-cCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHH
Confidence 011222333333222 47788899999999999999999999988731 222333456788876 67776655
Q ss_pred HH
Q psy11770 501 VM 502 (668)
Q Consensus 501 l~ 502 (668)
+.
T Consensus 222 l~ 223 (232)
T 1zrn_A 222 FE 223 (232)
T ss_dssp C-
T ss_pred HH
Confidence 53
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.21 E-value=2.2e-06 Score=83.18 Aligned_cols=123 Identities=11% Similarity=0.130 Sum_probs=85.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.++. +++++|+........+.+++|+...-.+. +..+...
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~------------------------- 137 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPH-IYSAKDL------------------------- 137 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTC-EEEHHHH-------------------------
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccce-EEecccc-------------------------
Confidence 356788888888764 89999999999899999999884321011 1111110
Q ss_pred EEecCH--hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc-EeeCCCccH-------HHHHh-cchhcccC
Q psy11770 424 LARSSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGTD-------VAKEA-SDIILTDD 492 (668)
Q Consensus 424 ~~r~~p--~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG-Iam~~~~~~-------~ak~~-ad~vl~~~ 492 (668)
... ..|...++.+.++ ++...+.+++|||+.||++|++.||++ ++++ ++.. ..++. ||+++.
T Consensus 138 ---~~~~~kpk~~~~~~~~~~-l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~-- 210 (229)
T 2fdr_A 138 ---GADRVKPKPDIFLHGAAQ-FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS-- 210 (229)
T ss_dssp ---CTTCCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--
T ss_pred ---ccCCCCcCHHHHHHHHHH-cCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec--
Confidence 011 2344455554443 578889999999999999999999998 6676 5543 46677 999987
Q ss_pred CchHHHHHHH
Q psy11770 493 NFSSIVKAVM 502 (668)
Q Consensus 493 ~~~~i~~~l~ 502 (668)
++..+.++|.
T Consensus 211 ~~~el~~~l~ 220 (229)
T 2fdr_A 211 RMQDLPAVIA 220 (229)
T ss_dssp CGGGHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777776663
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.21 E-value=3.3e-06 Score=89.17 Aligned_cols=112 Identities=21% Similarity=0.286 Sum_probs=76.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc--CCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK--PGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~--~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
-++.|++.+.|+.|+++|++|+|+||.....+..+|+++|+.. +.++++.. .+.. +.++
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~---~l~~---~~dG------------- 280 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGL---RLMK---DDEG------------- 280 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEE---CEEE---CTTC-------------
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEe---EEEE---ecCC-------------
Confidence 3578999999999999999999999999999999999998732 22222211 1100 0000
Q ss_pred cEEEEe-------cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhh-CCccEeeCCC
Q psy11770 421 LRVLAR-------SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK-ADVGFAMGIT 476 (668)
Q Consensus 421 ~~v~~r-------~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~-A~vGIam~~~ 476 (668)
.+..+ +..+.|...++.+... +.....++++|||.||.+||+. +|.++++..|
T Consensus 281 -~~tg~~~~~~p~~~~~gK~~~i~~~~~~--~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 281 -KILPKFDKDFPISIREGKVQTINKLIKN--DRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp -CEEEEECTTSCCCSTHHHHHHHHHHTCC--TTEECCSEEEECSGGGHHHHHHCTTCSEEEEEC
T ss_pred -ceeeeecCccceeCCCchHHHHHHHHHh--cCCCCcEEEEECCHhHHHHHhcCccCceEEEEc
Confidence 01111 3456899999886432 2233458889999999999996 5666665433
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.20 E-value=1.8e-06 Score=86.68 Aligned_cols=66 Identities=23% Similarity=0.281 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCC---ccEeeCCCccHHHHH--------hcchhcccCCchHHHH
Q psy11770 432 KYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKAD---VGFAMGITGTDVAKE--------ASDIILTDDNFSSIVK 499 (668)
Q Consensus 432 K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~---vGIam~~~~~~~ak~--------~ad~vl~~~~~~~i~~ 499 (668)
|...++.+.++ ++...+.++||||+ .||+.|.+.|| ++|++| ++.....+ .+|+++. ++..+.+
T Consensus 189 ~~~~~~~~~~~-~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g-~~~~~~~~~~~~~~~~~~d~v~~--~~~el~~ 264 (268)
T 3qgm_A 189 SEVIMREALDI-LGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTG-VTTRENLDQMIERHGLKPDYVFN--SLKDMVE 264 (268)
T ss_dssp SHHHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSS-SCCTTTHHHHHHHHTCCCSEEES--SHHHHHH
T ss_pred CHHHHHHHHHH-hCCCchhEEEECCCchHHHHHHHHCCCcEEEECCC-CCCHHHHHhhccccCCCCCEEEC--CHHHHHH
Confidence 44555555444 57888999999999 69999999999 788888 55443333 6888887 6777766
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
+|
T Consensus 265 ~l 266 (268)
T 3qgm_A 265 AL 266 (268)
T ss_dssp TC
T ss_pred HH
Confidence 54
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.19 E-value=3.3e-07 Score=90.88 Aligned_cols=125 Identities=13% Similarity=0.098 Sum_probs=81.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK-CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.+++.+.++.|++.|+++.++|+.....+.....+ .|+...-+.+ +.+.+.
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~--~~~~~~------------------------ 165 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHI--VLGDDP------------------------ 165 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCE--ECTTCT------------------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeE--Eecchh------------------------
Confidence 4689999999999999999999999987655443322 2332111110 000000
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCC--CEEEEEcCCccCHHHHhhCC---ccEeeCCCccHHHHHhcchhcccCCchHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGR--EVVAVTGDGTNDGPALKKAD---VGFAMGITGTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~--~~v~~iGDg~ND~~mlk~A~---vGIam~~~~~~~ak~~ad~vl~~~~~~~i 497 (668)
... ....|..+++.+.++ ++... +.+++|||+.||+.|.+.|| ++|++| ++.+..+..||+++. ++..+
T Consensus 166 ~~~--~~Kp~~~~~~~~~~~-lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~--sl~el 239 (250)
T 3l5k_A 166 EVQ--HGKPDPDIFLACAKR-FSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLN--SLQDF 239 (250)
T ss_dssp TCC--SCTTSTHHHHHHHHT-SSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECS--CGGGC
T ss_pred hcc--CCCCChHHHHHHHHH-cCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeec--CHHHh
Confidence 000 111233445544443 56666 89999999999999999999 677777 666677889999987 56655
Q ss_pred HHH
Q psy11770 498 VKA 500 (668)
Q Consensus 498 ~~~ 500 (668)
...
T Consensus 240 ~~~ 242 (250)
T 3l5k_A 240 QPE 242 (250)
T ss_dssp CGG
T ss_pred hHH
Confidence 433
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.16 E-value=9.9e-07 Score=87.26 Aligned_cols=122 Identities=20% Similarity=0.289 Sum_probs=83.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+...-+. ++.+.+.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~------------------------- 166 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--MLGGQSL------------------------- 166 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECTTTS-------------------------
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEE--EEecccC-------------------------
Confidence 4678999999999999999999999999999999999998422111 1111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe-eCCC----ccHHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MGIT----GTDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa-m~~~----~~~~ak~~ad~vl~~~~~~~i~ 498 (668)
....| |...++.+.++ ++...+.++++||+.||++|.+.||+++. +. . +.+..+..+|+++. ++..+.
T Consensus 167 -~~~Kp--~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~ad~vi~--~~~el~ 239 (243)
T 2hsz_A 167 -PEIKP--HPAPFYYLCGK-FGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT-YGYNYNIPIAQSKPDWIFD--DFADIL 239 (243)
T ss_dssp -SSCTT--SSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-SSCSTTCCGGGGCCSEEES--SGGGGG
T ss_pred -CCCCc--CHHHHHHHHHH-hCcChhhEEEEcCCHHHHHHHHHCCCeEEEEc-CCCCchhhhhhCCCCEEEC--CHHHHH
Confidence 01122 22233333322 47788899999999999999999998844 33 2 23334567888886 565554
Q ss_pred H
Q psy11770 499 K 499 (668)
Q Consensus 499 ~ 499 (668)
+
T Consensus 240 ~ 240 (243)
T 2hsz_A 240 K 240 (243)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.16 E-value=1.6e-07 Score=90.30 Aligned_cols=119 Identities=12% Similarity=0.197 Sum_probs=81.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-+ .++.+.+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~-------------------------- 133 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA--VTISADD-------------------------- 133 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE--EEECGGG--------------------------
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc--EEEecCc--------------------------
Confidence 3589999999999999 9999999999988888888888732100 0111110
Q ss_pred EEecCHhhH--HHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCC--C-ccHHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDK--YTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGI--T-GTDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K--~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~--~-~~~~ak~~ad~vl~~~~~~~i~ 498 (668)
....| ...++.+.++ ++...+.+++|||+.||++|.+.||+++++.. + +.+..+. +|+++. ++..+.
T Consensus 134 ----~~~~KP~~~~~~~~~~~-~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 134 ----TPKRKPDPLPLLTALEK-VNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp ----SSCCTTSSHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred ----CCCCCCCcHHHHHHHHH-cCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 11123 3334433332 57788899999999999999999999999741 2 2344444 888886 455544
Q ss_pred H
Q psy11770 499 K 499 (668)
Q Consensus 499 ~ 499 (668)
+
T Consensus 206 ~ 206 (209)
T 2hdo_A 206 E 206 (209)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=3.1e-05 Score=70.43 Aligned_cols=143 Identities=15% Similarity=0.151 Sum_probs=83.4
Q ss_pred cccccccCceEEEEEEEcCEEEecCCCCCCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHH
Q psy11770 127 KTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVA 206 (668)
Q Consensus 127 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~ 206 (668)
..||+|-|.+.+.++...+. .+++ +.+..+.+.. ....+|...|+++++.+
T Consensus 13 ~~~tit~gnr~vt~v~~~~g----------~~e~--elL~lAAs~E-----------------~~SeHPla~AIv~~A~~ 63 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG----------VDEK--TLADAAQLAS-----------------LADETPEGRSIVILAKQ 63 (156)
T ss_dssp --------CEEEEEEEECTT----------SCHH--HHHHHHHHTT-----------------SSCCSHHHHHHHHHHHH
T ss_pred CCCceecCCCeEEEEEecCC----------CCHH--HHHHHHHHHh-----------------CcCCCHHHHHHHHHHHH
Confidence 46999999999999875321 1222 2222222211 11246999999999987
Q ss_pred c-CCChHHHhhhCCccceeeeeccCCCCceEEEEEeeCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHH
Q psy11770 207 I-GKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRN 285 (668)
Q Consensus 207 ~-g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~ 285 (668)
. +......... .....+|++..++..+.+ +|+ -+.+|+++.|...+... |. .+.++ +.+
T Consensus 64 ~~~l~~~~~~~~-----~~~~~~F~a~~G~~Gv~v--~G~--~v~vGn~~~i~~l~~~~----gi--~~~~~-----~~~ 123 (156)
T 1svj_A 64 RFNLRERDVQSL-----HATFVPFTAQSRMSGINI--DNR--MIRKGSVDAIRRHVEAN----GG--HFPTD-----VDQ 123 (156)
T ss_dssp HTTCCCCCHHHH-----TCEEEEEETTTTEEEEEE--TTE--EEEEEEHHHHHHHHHHH----TC--CCCHH-----HHH
T ss_pred hcCCCccccccc-----ccceeeccccCCCCeEEE--CCE--EEEEeCcHHHHHHHHHc----CC--CCcHH-----HHH
Confidence 6 5432211000 123468998887677644 443 46789998776665421 11 12211 345
Q ss_pred HHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCC
Q psy11770 286 VIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRP 347 (668)
Q Consensus 286 ~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~ 347 (668)
..+.++++|.+++++|. |..++|++++.|++||
T Consensus 124 ~~~~la~~G~T~v~VA~-----------------------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 124 KVDQVARQGATPLVVVE-----------------------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHHHHHHTTCEEEEEEE-----------------------------TTEEEEEEEEEECCCC
T ss_pred HHHHHHhCCCCEEEEEE-----------------------------CCEEEEEEEEecCCCC
Confidence 67889999999999994 3389999999999986
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.1e-06 Score=84.72 Aligned_cols=123 Identities=11% Similarity=0.039 Sum_probs=89.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+. -+. ++.+....
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~--~~~~~~~~------------------------ 166 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDV--IIGSDINR------------------------ 166 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSC--CCCHHHHT------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeE--EEEcCcCC------------------------
Confidence 4678999999999997 999999999999999999999983 111 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccH--------H--HHHhcchhcccCC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD--------V--AKEASDIILTDDN 493 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~--------~--ak~~ad~vl~~~~ 493 (668)
....|..+++.+.++ ++...+.+++|||+.||+.|.+.||++++|. +... . .+..+|+++. +
T Consensus 167 ----~~kp~~~~~~~~~~~-lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~g~~~~~~~~~~~~~d~~~~--~ 238 (254)
T 3umg_A 167 ----KYKPDPQAYLRTAQV-LGLHPGEVMLAAAHNGDLEAAHATGLATAFI-LRPVEHGPHQTDDLAPTGSWDISAT--D 238 (254)
T ss_dssp ----CCTTSHHHHHHHHHH-TTCCGGGEEEEESCHHHHHHHHHTTCEEEEE-CCTTTTCTTCCSCSSCSSCCSEEES--S
T ss_pred ----CCCCCHHHHHHHHHH-cCCChHHEEEEeCChHhHHHHHHCCCEEEEE-ecCCcCCCCccccccccCCCceEEC--C
Confidence 011234455555443 6888899999999999999999999999988 4211 1 2567888887 7
Q ss_pred chHHHHHHHH
Q psy11770 494 FSSIVKAVMW 503 (668)
Q Consensus 494 ~~~i~~~l~~ 503 (668)
+..+.++|..
T Consensus 239 ~~el~~~l~~ 248 (254)
T 3umg_A 239 ITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcC
Confidence 8888888754
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.16 E-value=3.4e-06 Score=82.34 Aligned_cols=124 Identities=12% Similarity=0.099 Sum_probs=89.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++. +++.++|+.....+....+.+|+...-+.+ +.+.+..
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~~------------------------ 155 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDI--FVSEDTG------------------------ 155 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEE--EEGGGTT------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheE--EEecccC------------------------
Confidence 4678999999999999 999999999999999999999884322111 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcC-CCCCEEEEEcCCc-cCHHHHhhCCccEe-eCCCc--cHHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKIS-AGREVVAVTGDGT-NDGPALKKADVGFA-MGITG--TDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~-~~~~~v~~iGDg~-ND~~mlk~A~vGIa-m~~~~--~~~ak~~ad~vl~~~~~~~i~ 498 (668)
....|..+++.+.++ ++ ...+.+++|||+. ||+.|.+.||++.. ++ .+ .+..+..+|+++. ++..+.
T Consensus 156 ----~~kp~~~~~~~~~~~-~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~ad~v~~--~~~el~ 227 (238)
T 3ed5_A 156 ----FQKPMKEYFNYVFER-IPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMN-PDMKPNVPEIIPTYEIR--KLEELY 227 (238)
T ss_dssp ----SCTTCHHHHHHHHHT-STTCCGGGEEEEESCTTTTHHHHHHTTCEEEEEC-TTCCCCTTCCCCSEEES--SGGGHH
T ss_pred ----CCCCChHHHHHHHHH-cCCCChhHeEEECCCcHHHHHHHHHCCCEEEEEC-CCCCCCcccCCCCeEEC--CHHHHH
Confidence 112234555555443 57 7889999999998 99999999999543 33 33 4556678899988 788888
Q ss_pred HHHH
Q psy11770 499 KAVM 502 (668)
Q Consensus 499 ~~l~ 502 (668)
+++.
T Consensus 228 ~~l~ 231 (238)
T 3ed5_A 228 HILN 231 (238)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8775
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.11 E-value=2.1e-06 Score=81.86 Aligned_cols=122 Identities=15% Similarity=0.196 Sum_probs=82.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+...-+. ++.+.+..
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~~------------------------ 125 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--IFSAESVK------------------------ 125 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGGT------------------------
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE--EEehhhcC------------------------
Confidence 45789999 9999999 99999999999999999999998432211 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC---CCccHHHHHhcchhcccCCchHHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG---ITGTDVAKEASDIILTDDNFSSIVKA 500 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~---~~~~~~ak~~ad~vl~~~~~~~i~~~ 500 (668)
+..| +..+++.+.++ ++ .+.+++|||+.||+.|.+.||+++++- .++.+..+..+|+++. ++..+.++
T Consensus 126 --~~Kp--~~~~~~~~~~~-~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~ 196 (201)
T 2w43_A 126 --EYKP--SPKVYKYFLDS-IG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEW 196 (201)
T ss_dssp --CCTT--CHHHHHHHHHH-HT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHH
T ss_pred --CCCC--CHHHHHHHHHh-cC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHH
Confidence 0112 23444444333 35 778999999999999999999997762 1333333446788776 67777666
Q ss_pred HH
Q psy11770 501 VM 502 (668)
Q Consensus 501 l~ 502 (668)
+.
T Consensus 197 l~ 198 (201)
T 2w43_A 197 IL 198 (201)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.09 E-value=6.6e-06 Score=82.39 Aligned_cols=67 Identities=9% Similarity=0.085 Sum_probs=46.2
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCCccEeeCC---CccHHHHH---hcchhcccCCchHHHHHHH
Q psy11770 433 YTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVGFAMGI---TGTDVAKE---ASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 433 ~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~vGIam~~---~~~~~ak~---~ad~vl~~~~~~~i~~~l~ 502 (668)
...++.+.+. ++...+.++||||+ .||+.|++.||++.++.. ++.+..++ .+|+++. ++..+.+-++
T Consensus 186 ~~~~~~~~~~-lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~--~~~el~~~~~ 259 (266)
T 3pdw_A 186 SIIMEQAMRV-LGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAID--SLTEWIPYIE 259 (266)
T ss_dssp SHHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEES--SGGGGHHHHH
T ss_pred HHHHHHHHHH-cCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeC--CHHHHHHHhh
Confidence 3555555444 68888999999999 799999999998766542 23344444 4999988 6777766553
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.08 E-value=4.7e-06 Score=82.72 Aligned_cols=123 Identities=8% Similarity=0.084 Sum_probs=86.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+...-+.+ +.+.+..
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~--~~~~~~~------------------------ 144 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAV--ISVDAKR------------------------ 144 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEE--EEGGGGT------------------------
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEE--EEccccC------------------------
Confidence 57799999999999 9999999999999999999999984322211 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc--------------------------
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG-------------------------- 477 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~-------------------------- 477 (668)
.+..|...++.+.++ ++...+.+++|||+.||+.|.+.||+++++. +.
T Consensus 145 ----~~Kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~l~~g~~~~~~~~~~~~~ 218 (253)
T 1qq5_A 145 ----VFKPHPDSYALVEEV-LGVTPAEVLFVSSNGFDVGGAKNFGFSVARV-ARLSQEALARELVSGTIAPLTMFKALRM 218 (253)
T ss_dssp ----CCTTSHHHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHHHTCEEEEE-CCSCHHHHHHHTTSSSCCHHHHHHHHHS
T ss_pred ----CCCCCHHHHHHHHHH-cCCCHHHEEEEeCChhhHHHHHHCCCEEEEE-CCcccchhhhhccccccccccccccccc
Confidence 111223333333332 4778889999999999999999999999887 44
Q ss_pred -cHHHHHhcchhcccCCchHHHHHHH
Q psy11770 478 -TDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 478 -~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.+..+..+|+++. ++..+.+++.
T Consensus 219 ~~~~~~~~~~~~~~--~~~el~~~l~ 242 (253)
T 1qq5_A 219 REETYAEAPDFVVP--ALGDLPRLVR 242 (253)
T ss_dssp SCCTTSCCCSEEES--SGGGHHHHHH
T ss_pred ccCCCCCCCCeeeC--CHHHHHHHHH
Confidence 1223345788876 6888877764
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.07 E-value=1e-05 Score=76.41 Aligned_cols=93 Identities=17% Similarity=0.155 Sum_probs=70.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDN-INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.++|+.|+++|++++++||+. ...+..+.+.+|+...-+ .
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~---------------------------------~ 114 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV---------------------------------H 114 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE---------------------------------E
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc---------------------------------e
Confidence 578999999999999999999999999 789999999999842100 0
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
++. .+..|...++.+.++ ++...+.+++|||+.+|+.+.+.||+...
T Consensus 115 ~~~--~~~~k~~~~~~~~~~-~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 115 REI--YPGSKITHFERLQQK-TGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp EEE--SSSCHHHHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred eEE--EeCchHHHHHHHHHH-cCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 111 122344445444433 57788899999999999999999997644
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.03 E-value=1.2e-05 Score=75.63 Aligned_cols=107 Identities=14% Similarity=0.013 Sum_probs=71.9
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.|++.+.++.|++.|++++++|+... .+....+.+|+...-+ .++.+.+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~--~~~~~~~~-------------------------- 133 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFT--EVVTSSSG-------------------------- 133 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEE--EEECGGGC--------------------------
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhee--eeeecccc--------------------------
Confidence 578999999999999999999999864 5677778888732100 01111100
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcc
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad 486 (668)
.+ +..|...++.+.++ ++.. .++++||+.||++|++.||+++++. +.....++..+
T Consensus 134 ~~--~kp~~~~~~~~~~~-~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 134 FK--RKPNPESMLYLREK-YQIS--SGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp CC--CTTSCHHHHHHHHH-TTCS--SEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred CC--CCCCHHHHHHHHHH-cCCC--eEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 01 11223344444333 4555 8899999999999999999999887 56666555544
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.02 E-value=9e-06 Score=79.22 Aligned_cols=125 Identities=14% Similarity=0.183 Sum_probs=85.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|++ |+++.++|+.....+....+.++- .-+. ++.+.+..
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~fd~-i~~~~~~~------------------------ 149 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EFDH-IITAQDVG------------------------ 149 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CCSE-EEEHHHHT------------------------
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---ccCE-EEEccccC------------------------
Confidence 578999999999999 899999999998877777665432 1111 12222111
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCccEeeCCCcc-----------HHHHHhcchhccc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITGT-----------DVAKEASDIILTD 491 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vGIam~~~~~-----------~~ak~~ad~vl~~ 491 (668)
.....|+-....++. . +.++...+.+++|||+. ||+.|.+.||++++|. +.. +..+..+|+++.
T Consensus 150 ~~KP~~~~~~~~l~~-~-~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~-~~~~~~~g~g~~~~~~~~~~ad~v~~- 225 (240)
T 3smv_A 150 SYKPNPNNFTYMIDA-L-AKAGIEKKDILHTAESLYHDHIPANDAGLVSAWI-YRRHGKEGYGATHVPSRMPNVDFRFN- 225 (240)
T ss_dssp SCTTSHHHHHHHHHH-H-HHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEE-CTTCC-------CCCSSCCCCSEEES-
T ss_pred CCCCCHHHHHHHHHH-H-HhcCCCchhEEEECCCchhhhHHHHHcCCeEEEE-cCCCcccCCCCCCCCcCCCCCCEEeC-
Confidence 012234433344333 2 22588889999999996 9999999999999985 322 233478899987
Q ss_pred CCchHHHHHHH
Q psy11770 492 DNFSSIVKAVM 502 (668)
Q Consensus 492 ~~~~~i~~~l~ 502 (668)
++..+.+++.
T Consensus 226 -~~~el~~~l~ 235 (240)
T 3smv_A 226 -SMGEMAEAHK 235 (240)
T ss_dssp -SHHHHHHHHH
T ss_pred -CHHHHHHHHH
Confidence 7888877764
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.00 E-value=3.4e-06 Score=85.02 Aligned_cols=114 Identities=15% Similarity=0.093 Sum_probs=79.0
Q ss_pred CCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 345 VRPEVPEAIKKCQRA-GITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 345 l~~~~~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. - +. ++.+.+..
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~-f-~~-i~~~~~~~------------------------ 167 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR-P-EY-FITANDVK------------------------ 167 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC-C-SS-EECGGGCS------------------------
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc-c-CE-EEEcccCC------------------------
Confidence 468999999999999 99999999999999998988888742 1 11 12221110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCC-------CCCEEEEEcCCccCHHHHhhCCccEee---CCCccHHHHH-hcchhccc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISA-------GREVVAVTGDGTNDGPALKKADVGFAM---GITGTDVAKE-ASDIILTD 491 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~-------~~~~v~~iGDg~ND~~mlk~A~vGIam---~~~~~~~ak~-~ad~vl~~ 491 (668)
....|...++.+.++ ++. ..+.+++|||+.||+.|++.||+++++ | ++.+..+. .||+++.+
T Consensus 168 ----~~kp~~~~~~~~~~~-lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~-~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 168 ----QGKPHPEPYLKGRNG-LGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATT-FDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp ----SCTTSSHHHHHHHHH-TTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSS-SCHHHHTTSSCSEEESS
T ss_pred ----CCCCChHHHHHHHHH-cCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCC-CCHHHHhhCCCCEEECC
Confidence 011223334443332 577 788999999999999999999976655 5 33344343 58988863
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.96 E-value=4.6e-05 Score=75.23 Aligned_cols=120 Identities=14% Similarity=0.079 Sum_probs=83.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.+++.+.++.|+ .|+++.++|+.....+....+.+|+...-+ .+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------~i 157 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP---------------------------------RI 157 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC---------------------------------CE
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc---------------------------------ee
Confidence 45799999999999 999999999999888888888888742211 12
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCccEeeCCCccH--------HHHHhcch-hcccCC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITGTD--------VAKEASDI-ILTDDN 493 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vGIam~~~~~~--------~ak~~ad~-vl~~~~ 493 (668)
++...| +...++.+.++ ++...+.+++|||+. ||+.|.+.||+++++-..+.. .....+|+ ++. +
T Consensus 158 ~~~~kp--~~~~~~~~~~~-l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~ 232 (251)
T 2pke_A 158 EVVSEK--DPQTYARVLSE-FDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--D 232 (251)
T ss_dssp EEESCC--SHHHHHHHHHH-HTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--S
T ss_pred eeeCCC--CHHHHHHHHHH-hCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--C
Confidence 222222 23344443333 578889999999999 999999999999875323321 11235676 666 6
Q ss_pred chHHHHHHH
Q psy11770 494 FSSIVKAVM 502 (668)
Q Consensus 494 ~~~i~~~l~ 502 (668)
+..+..++.
T Consensus 233 ~~el~~~l~ 241 (251)
T 2pke_A 233 PSGWPAAVR 241 (251)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777664
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.96 E-value=8e-06 Score=81.67 Aligned_cols=124 Identities=12% Similarity=0.146 Sum_probs=85.2
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.|++.+.++.|++.|+++.++|+... .+..+.+.+|+...-+.+ +.+.+.. .
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~--~~~~~~~------------------------~ 159 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFV--LTSEAAG------------------------W 159 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCE--EEHHHHS------------------------S
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEE--EeecccC------------------------C
Confidence 579999999999999999999999765 467888889984322211 1111110 0
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCccEeeCCCccH--H---HHHhcchhcccCCchHHH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITGTD--V---AKEASDIILTDDNFSSIV 498 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vGIam~~~~~~--~---ak~~ad~vl~~~~~~~i~ 498 (668)
....|+--..+.+. ++..++.+++|||+. ||+.|.+.||+++++...+.. . ....+|+++. ++..+.
T Consensus 160 ~Kp~~~~~~~~~~~-----~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~ 232 (263)
T 3k1z_A 160 PKPDPRIFQEALRL-----AHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLL 232 (263)
T ss_dssp CTTSHHHHHHHHHH-----HTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHH
T ss_pred CCCCHHHHHHHHHH-----cCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHH
Confidence 11223323333333 478889999999997 999999999999998733321 1 2236899887 788888
Q ss_pred HHHH
Q psy11770 499 KAVM 502 (668)
Q Consensus 499 ~~l~ 502 (668)
++|.
T Consensus 233 ~~l~ 236 (263)
T 3k1z_A 233 PALD 236 (263)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8775
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=3.1e-05 Score=77.57 Aligned_cols=49 Identities=12% Similarity=0.135 Sum_probs=40.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCccCCCceE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVT---GDNINTARSIATKCGIVKPGEDYL 391 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~T---Gd~~~ta~~ia~~~gi~~~~~~~i 391 (668)
+++.+++.+++++++++|++++++| |+.........+++|+....+.++
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii 83 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVV 83 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEE
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEE
Confidence 5577899999999999999999999 999999888899999854333333
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.90 E-value=5.2e-06 Score=80.64 Aligned_cols=135 Identities=15% Similarity=0.087 Sum_probs=81.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCCceE-EeehhhHHHhhhcCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNI---------------NTARSIATKCGIVKPGEDYL-ILEGKEFNRRVRDNN 406 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~i-~~~g~~~~~~~~~~~ 406 (668)
.++.|++.++|+.|+++|+++.++|+... ..+..+.+++|+. -..++ ...+.. .
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~-g------- 124 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEA-G------- 124 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTT-C-------
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCC-C-------
Confidence 46789999999999999999999999987 6777788888873 11111 111100 0
Q ss_pred hhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE-e-eCCCc--c-HHH
Q psy11770 407 GEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-A-MGITG--T-DVA 481 (668)
Q Consensus 407 ~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI-a-m~~~~--~-~~a 481 (668)
... ..... + .....|..+++.+.++ ++...+.++||||+.||+.+.+.||+.. . +. .+ . +..
T Consensus 125 -~~~-----~~~~~--~---~~~KP~~~~~~~~~~~-~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~-~g~~~~~~~ 191 (218)
T 2o2x_A 125 -VGP-----LAIPD--H---PMRKPNPGMLVEAGKR-LALDLQRSLIVGDKLADMQAGKRAGLAQGWLVD-GEAAVQPGF 191 (218)
T ss_dssp -CST-----TCCSS--C---TTSTTSCHHHHHHHHH-HTCCGGGCEEEESSHHHHHHHHHTTCSEEEEET-CCCEEETTE
T ss_pred -cee-----ecccC--C---ccCCCCHHHHHHHHHH-cCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEe-cCCCCcccc
Confidence 000 00000 0 0111223344444333 5778889999999999999999999764 3 22 22 1 112
Q ss_pred HHhcchhcccCCchHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~ 502 (668)
...+|+++. ++..+.+++.
T Consensus 192 ~~~~~~~i~--~l~el~~~l~ 210 (218)
T 2o2x_A 192 AIRPLRDSS--ELGDLLAAIE 210 (218)
T ss_dssp EEEEESSHH--HHHHHHHHHH
T ss_pred cCCCCEecc--cHHHHHHHHH
Confidence 234666665 5666655553
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.86 E-value=3.4e-05 Score=72.99 Aligned_cols=134 Identities=10% Similarity=0.156 Sum_probs=86.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---HHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNI---NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~---~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+...-+ .+.. +.+...
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd-~i~~-~~~~~~-------------------- 91 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD-FIYA-SNSELQ-------------------- 91 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEE-EEEE-CCTTSS--------------------
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheE-EEEE-cccccc--------------------
Confidence 5889999999999999999999998876 88889999999842111 0110 000000
Q ss_pred cEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCCccEeeCCCccH-----HHH-HhcchhcccCC
Q psy11770 421 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVGFAMGITGTD-----VAK-EASDIILTDDN 493 (668)
Q Consensus 421 ~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~vGIam~~~~~~-----~ak-~~ad~vl~~~~ 493 (668)
..-.....| .+.+.+.++ ++...+.+++|||+ .+|+.+-+.||+....-.++.. ... ..+|+++.+.+
T Consensus 92 ~~~~~KP~p----~~~~~~~~~-~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~ 166 (189)
T 3ib6_A 92 PGKMEKPDK----TIFDFTLNA-LQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWD 166 (189)
T ss_dssp TTCCCTTSH----HHHHHHHHH-HTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESS
T ss_pred ccCCCCcCH----HHHHHHHHH-cCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceecccc
Confidence 000011122 333333222 47788899999999 7999999999976542212221 111 26788887667
Q ss_pred chHHHHHHHHH
Q psy11770 494 FSSIVKAVMWG 504 (668)
Q Consensus 494 ~~~i~~~l~~g 504 (668)
+..+.+++...
T Consensus 167 l~~l~~~l~l~ 177 (189)
T 3ib6_A 167 LADVPEALLLL 177 (189)
T ss_dssp GGGHHHHHHHH
T ss_pred HHhHHHHHHHH
Confidence 88888887543
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.84 E-value=6.8e-05 Score=72.06 Aligned_cols=126 Identities=17% Similarity=0.174 Sum_probs=83.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+...-+. ++.+.+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~--~~~~~~~~------------------------ 137 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDV--MVFGDQVK------------------------ 137 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECGGGSS------------------------
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccc--cccccccC------------------------
Confidence 3578999999999999999999999999999999999998532221 11111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc----EeeCCCccHHHHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG----FAMGITGTDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG----Iam~~~~~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
.....|+-=..+.+. ++..++.+++|||+.+|+.+-+.||+. +.-|.+..+..+++.+..+. +.+.+.+
T Consensus 138 ~~KP~p~~~~~a~~~-----lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~ 210 (216)
T 3kbb_A 138 NGKPDPEIYLLVLER-----LNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILN 210 (216)
T ss_dssp SCTTSTHHHHHHHHH-----HTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHH
T ss_pred CCcccHHHHHHHHHh-----hCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHH
Confidence 011223222222332 578889999999999999999999974 33443445555665555544 3455655
Q ss_pred HHH
Q psy11770 500 AVM 502 (668)
Q Consensus 500 ~l~ 502 (668)
.|.
T Consensus 211 ~l~ 213 (216)
T 3kbb_A 211 VLK 213 (216)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.83 E-value=7.6e-05 Score=74.20 Aligned_cols=68 Identities=15% Similarity=0.160 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCccEeeCCCc---cHH-HH--HhcchhcccCCchHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAMGITG---TDV-AK--EASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vGIam~~~~---~~~-ak--~~ad~vl~~~~~~~i~~~l 501 (668)
.|...++.+.++ ++...+.+++|||+. ||++|++.||+++++-..+ .+. .. ..+|+++. ++..+.+.+
T Consensus 191 pk~~~~~~~~~~-lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~--~~~el~~~l 265 (271)
T 2x4d_A 191 PSPEFFKSALQA-IGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVD--NLAEAVDLL 265 (271)
T ss_dssp TCHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEES--SHHHHHHHH
T ss_pred CCHHHHHHHHHH-hCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeC--CHHHHHHHH
Confidence 456677766554 688889999999998 9999999999988753233 111 11 23788776 677776655
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.70 E-value=7.7e-05 Score=70.66 Aligned_cols=99 Identities=9% Similarity=0.092 Sum_probs=70.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.| +++++|+.....+..+.+.+|+...-+.++ .+.+..
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~--~~~~~~------------------------ 138 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFF--TSSALG------------------------ 138 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEE--EHHHHS------------------------
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEE--eecccC------------------------
Confidence 36799999999999999 999999999999999999999843222211 111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
.....|+ +++.+.++ ++...+.+++|||+.||+.|.+.||+.+.+-
T Consensus 139 ~~Kp~~~----~~~~~~~~-~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 139 VMKPNPA----MYRLGLTL-AQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp CCTTCHH----HHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred CCCCCHH----HHHHHHHH-cCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 0111222 33333322 4778889999999999999999999998865
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.70 E-value=1.7e-05 Score=75.90 Aligned_cols=102 Identities=9% Similarity=0.055 Sum_probs=69.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH------cCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK------CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKV 417 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~------~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~ 417 (668)
++.|++.+.++.|++ |++++++|+.....+..+.+. .|+...-+. ++.+.+..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~--~~~~~~~~------------------ 147 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDK--VYASCQMG------------------ 147 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSE--EEEHHHHT------------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCe--EEeecccC------------------
Confidence 357899999999999 999999999988887777766 566321111 11111100
Q ss_pred cCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCcc
Q psy11770 418 WPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGT 478 (668)
Q Consensus 418 ~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~ 478 (668)
...|. ..+++.+.++ ++...+.+++|||+.||+.|.+.||+++++. ++.
T Consensus 148 --------~~Kp~--~~~~~~~~~~-~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~-~~~ 196 (211)
T 2i6x_A 148 --------KYKPN--EDIFLEMIAD-SGMKPEETLFIDDGPANVATAERLGFHTYCP-DNG 196 (211)
T ss_dssp --------CCTTS--HHHHHHHHHH-HCCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTT
T ss_pred --------CCCCC--HHHHHHHHHH-hCCChHHeEEeCCCHHHHHHHHHcCCEEEEE-CCH
Confidence 01121 2233333332 4778899999999999999999999999887 444
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.64 E-value=4.7e-05 Score=76.08 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=40.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCccCCCceEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVT---GDNINTARSIATKCGIVKPGEDYLI 392 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~T---Gd~~~ta~~ia~~~gi~~~~~~~i~ 392 (668)
.+ +++.++|++++++|++++++| |+.........+++|+....+.++.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~ 72 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYT 72 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEE
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheec
Confidence 45 899999999999999999999 8888888888999998654444433
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.63 E-value=6.5e-05 Score=66.36 Aligned_cols=98 Identities=8% Similarity=0.051 Sum_probs=66.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+...-+. + +.+.+..
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~-i-~~~~~~~------------------------ 71 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDK-V-LLSGELG------------------------ 71 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSE-E-EEHHHHS------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccE-E-EEeccCC------------------------
Confidence 3668899999999999999999999998888888888887422111 1 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
..+..|+ +.+.+.++ ++...+.++++||+.+|+.+.+.+|+...
T Consensus 72 ~~Kp~~~----~~~~~~~~-~~~~~~~~~~vgD~~~di~~a~~~G~~~i 115 (137)
T 2pr7_A 72 VEKPEEA----AFQAAADA-IDLPMRDCVLVDDSILNVRGAVEAGLVGV 115 (137)
T ss_dssp CCTTSHH----HHHHHHHH-TTCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred CCCCCHH----HHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence 0111222 22222222 46777889999999999999999997443
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.55 E-value=9.6e-05 Score=73.69 Aligned_cols=124 Identities=10% Similarity=0.161 Sum_probs=83.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+...-+. + +.+.+..
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~-i-~~~~~~~------------------------ 173 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDA-I-VIGGEQK------------------------ 173 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSE-E-EEGGGSS------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhhe-E-EecCCCC------------------------
Confidence 577999999999998 599999999999999999999998432221 1 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCCc--cEeeCCCccH---HHHHhcchhcccCCchHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADV--GFAMGITGTD---VAKEASDIILTDDNFSSI 497 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~v--GIam~~~~~~---~ak~~ad~vl~~~~~~~i 497 (668)
..+..| .+.+.+.++ ++..++.+++|||+ .||+.+-+.||+ .|.+. .+.. .....+|+++. ++..+
T Consensus 174 ~~KP~p----~~~~~~~~~-~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~-~~~~~~~~~~~~~~~~i~--~~~el 245 (260)
T 2gfh_A 174 EEKPAP----SIFYHCCDL-LGVQPGDCVMVGDTLETDIQGGLNAGLKATVWIN-KSGRVPLTSSPMPHYMVS--SVLEL 245 (260)
T ss_dssp SCTTCH----HHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEEC-TTCCCCSSCCCCCSEEES--SGGGH
T ss_pred CCCCCH----HHHHHHHHH-cCCChhhEEEECCCchhhHHHHHHCCCceEEEEc-CCCCCcCcccCCCCEEEC--CHHHH
Confidence 011122 333333222 47788899999995 999999999999 57776 3321 12245787776 67777
Q ss_pred HHHHH
Q psy11770 498 VKAVM 502 (668)
Q Consensus 498 ~~~l~ 502 (668)
.+++.
T Consensus 246 ~~~l~ 250 (260)
T 2gfh_A 246 PALLQ 250 (260)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.53 E-value=7e-05 Score=72.53 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=78.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++. +++.++|+.... .+.+|+...-+. ++.+.+..
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~--~~~~~~~~------------------------ 152 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAF--ALCAEDLG------------------------ 152 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSE--EEEHHHHT------------------------
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeee--eEEccccC------------------------
Confidence 4678999999999998 999999987754 344555321111 11111000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCccEee---CCCccHHHHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAM---GITGTDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vGIam---~~~~~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
....|..+++.+.++ ++...+.+++|||+. ||+.|.+.||+++++ |.+..+. +..+|+++. ++..+.+
T Consensus 153 ----~~kp~~~~~~~~~~~-~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~ 224 (230)
T 3vay_A 153 ----IGKPDPAPFLEALRR-AKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPE 224 (230)
T ss_dssp ----CCTTSHHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHH
T ss_pred ----CCCcCHHHHHHHHHH-hCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHH
Confidence 011223444444333 578889999999997 999999999998876 2122222 567888887 7888887
Q ss_pred HHH
Q psy11770 500 AVM 502 (668)
Q Consensus 500 ~l~ 502 (668)
+|.
T Consensus 225 ~l~ 227 (230)
T 3vay_A 225 VLA 227 (230)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.41 E-value=2.5e-05 Score=74.32 Aligned_cols=105 Identities=10% Similarity=0.124 Sum_probs=64.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK-CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.+.++.|++.|++++++|+........+... +|+...-+. ++.+.+..
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~--~~~~~~~~----------------------- 145 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADH--IYLSQDLG----------------------- 145 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSE--EEEHHHHT-----------------------
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheee--EEEecccC-----------------------
Confidence 4579999999999999999999999765543322222 222100000 11111000
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
.....|+--..+.+. ++...+.++++||+.||+.|.+.||+...+. +..+.
T Consensus 146 -~~Kp~~~~~~~~~~~-----~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~-~~~~~ 196 (206)
T 2b0c_A 146 -MRKPEARIYQHVLQA-----EGFSPSDTVFFDDNADNIEGANQLGITSILV-KDKTT 196 (206)
T ss_dssp -CCTTCHHHHHHHHHH-----HTCCGGGEEEEESCHHHHHHHHTTTCEEEEC-CSTTH
T ss_pred -CCCCCHHHHHHHHHH-----cCCCHHHeEEeCCCHHHHHHHHHcCCeEEEe-cCCch
Confidence 011122222233333 4778889999999999999999999998876 44443
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00019 Score=70.09 Aligned_cols=58 Identities=17% Similarity=0.166 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCCccEe---eCCCcc-HHHH---Hhcchhcc
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVGFA---MGITGT-DVAK---EASDIILT 490 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~vGIa---m~~~~~-~~ak---~~ad~vl~ 490 (668)
.|...++.+.++ ++...+.+++|||+ .||++|++.||++++ +| ++. +..+ ..+|+++.
T Consensus 177 pk~~~~~~~~~~-lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 177 PSPWIIRAALNK-MQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG-VSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp TSTHHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSS-SCCGGGGSSCSSCCSEEES
T ss_pred CCHHHHHHHHHH-cCCCcceEEEECCCchhHHHHHHHcCCeEEEECCC-CCChhhhhhcCCCCCEEEC
Confidence 455666666554 68888999999999 799999999998854 45 333 3333 36788876
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00083 Score=66.28 Aligned_cols=50 Identities=20% Similarity=0.299 Sum_probs=35.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCccCCCceE
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVT---GDNINTARSIATKCGIVKPGEDYL 391 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~T---Gd~~~ta~~ia~~~gi~~~~~~~i 391 (668)
.++.-+++.++++.+++.|++++++| |+.........+++|+..+...++
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~~~~~~ 73 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEISEDEIF 73 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCCGGGEE
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCccHHHee
Confidence 34555788999999999999999999 666666666667778754433333
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00018 Score=69.92 Aligned_cols=104 Identities=8% Similarity=0.067 Sum_probs=69.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH------HcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIAT------KCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKV 417 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~------~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~ 417 (668)
++.|++.+.++.|++. +++.++|+.....+..+.+ ..|+...-+. ++.+.+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~--i~~~~~~~------------------ 170 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEK--TYLSYEMK------------------ 170 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSE--EEEHHHHT------------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCE--EEeecccC------------------
Confidence 3568999999999999 9999999999888876663 3444211110 11111000
Q ss_pred cCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 418 WPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 418 ~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
.....| .+.+.+.++ ++...+.+++|||+.||+.|.+.||++.++. ++.+.
T Consensus 171 ------~~KP~~----~~~~~~~~~-~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v-~~~~~ 221 (229)
T 4dcc_A 171 ------MAKPEP----EIFKAVTED-AGIDPKETFFIDDSEINCKVAQELGISTYTP-KAGED 221 (229)
T ss_dssp ------CCTTCH----HHHHHHHHH-HTCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTTCC
T ss_pred ------CCCCCH----HHHHHHHHH-cCCCHHHeEEECCCHHHHHHHHHcCCEEEEE-CCHHH
Confidence 011222 333333332 4788899999999999999999999999887 54433
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00071 Score=64.28 Aligned_cols=90 Identities=10% Similarity=0.052 Sum_probs=57.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|+++|+++.++||.....+..+.. .. .+.++. +.+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~--~d~v~~--~~~~------------------------- 83 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV--NDWMIA--APRP------------------------- 83 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT--TTTCEE--CCCC-------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc--CCEEEE--CCcC-------------------------
Confidence 578999999999999999999999998877754443 10 011111 0000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCC-CEEEEEcCCccCHHHHhhCCc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKADV 469 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~-~~v~~iGDg~ND~~mlk~A~v 469 (668)
.+..|. ..++....++ ++... +.++||||..+|+.+-+.||+
T Consensus 84 -~~~KP~--p~~~~~a~~~-l~~~~~~~~v~VGDs~~Di~aA~~aG~ 126 (196)
T 2oda_A 84 -TAGWPQ--PDACWMALMA-LNVSQLEGCVLISGDPRLLQSGLNAGL 126 (196)
T ss_dssp -SSCTTS--THHHHHHHHH-TTCSCSTTCEEEESCHHHHHHHHHHTC
T ss_pred -CCCCCC--hHHHHHHHHH-cCCCCCccEEEEeCCHHHHHHHHHCCC
Confidence 011221 1222222221 35543 789999999999999999996
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00074 Score=70.97 Aligned_cols=138 Identities=16% Similarity=0.219 Sum_probs=84.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+...-+.-.++.+.+.... .........
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-------------~~~~~~~kp 281 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA-------------ENMYPQARP 281 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-------------HHHSTTSCC
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc-------------ccccccccC
Confidence 5789999999999999999999999999999999999998543220012333332110 000000000
Q ss_pred EEecCHhhHHHHHHHHHHhhcC--------------CCCCEEEEEcCCccCHHHHhhCCccE-eeCCCcc------HHH-
Q psy11770 424 LARSSPSDKYTLVKGMIDSKIS--------------AGREVVAVTGDGTNDGPALKKADVGF-AMGITGT------DVA- 481 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~--------------~~~~~v~~iGDg~ND~~mlk~A~vGI-am~~~~~------~~a- 481 (668)
.....|+- .....+. ++ ..++.+++|||+.+|+.+-+.||+.. ++. .+. +..
T Consensus 282 ~~KP~P~~----~~~a~~~-lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~ 355 (384)
T 1qyi_A 282 LGKPNPFS----YIAALYG-NNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELE 355 (384)
T ss_dssp CCTTSTHH----HHHHHHC-CCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHH
T ss_pred CCCCCHHH----HHHHHHH-cCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHh
Confidence 01112221 1111111 23 56788999999999999999999653 333 221 222
Q ss_pred HHhcchhcccCCchHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~ 502 (668)
...+|+++. ++..+..++.
T Consensus 356 ~~~ad~vi~--sl~eL~~~l~ 374 (384)
T 1qyi_A 356 AHHADYVIN--HLGELRGVLD 374 (384)
T ss_dssp HTTCSEEES--SGGGHHHHHS
T ss_pred hcCCCEEEC--CHHHHHHHHH
Confidence 236888887 6787777653
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00079 Score=68.69 Aligned_cols=71 Identities=10% Similarity=0.149 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCccEee---CCCccHHHH---------HhcchhcccCCchHHH
Q psy11770 432 KYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVGFAM---GITGTDVAK---------EASDIILTDDNFSSIV 498 (668)
Q Consensus 432 K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vGIam---~~~~~~~ak---------~~ad~vl~~~~~~~i~ 498 (668)
|..+++.+.++ ++...+.++||||+. ||+.|.+.||+...+ |.+..+... ..+|+++. ++..+.
T Consensus 217 ~~~~~~~~~~~-lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~--~l~el~ 293 (306)
T 2oyc_A 217 SPYMFECITEN-FSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVE--SIADLT 293 (306)
T ss_dssp STHHHHHHHHH-SCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEES--SGGGGG
T ss_pred CHHHHHHHHHH-cCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEEC--CHHHHH
Confidence 34455555544 678889999999996 999999999987765 212222332 25788887 677777
Q ss_pred HHHH-HHH
Q psy11770 499 KAVM-WGR 505 (668)
Q Consensus 499 ~~l~-~gR 505 (668)
+++. +|+
T Consensus 294 ~~l~~~~~ 301 (306)
T 2oyc_A 294 EGLEDEGH 301 (306)
T ss_dssp GGC-----
T ss_pred HHHHhhcc
Confidence 7664 444
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0007 Score=66.82 Aligned_cols=116 Identities=12% Similarity=0.213 Sum_probs=76.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-+. ++.+.+..
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~--i~~~~~~~------------------------ 167 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF--IADAGKCK------------------------ 167 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--ECCGGGCC------------------------
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--eecccccC------------------------
Confidence 467999999999999999999888764 45677888998532221 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc-cEeeCCCccHHHHHhcchhcccCCchHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAMGITGTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v-GIam~~~~~~~ak~~ad~vl~~~~~~~i 497 (668)
.....|+-=..+.+. ++..++.+++|||+.+|+.+-+.||+ .|+++ +..+ ...||+++. ++..+
T Consensus 168 ~~KP~p~~~~~a~~~-----lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi~--~l~eL 232 (250)
T 4gib_A 168 NNKPHPEIFLMSAKG-----LNVNPQNCIGIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVVD--STNQL 232 (250)
T ss_dssp SCTTSSHHHHHHHHH-----HTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEES--SGGGC
T ss_pred CCCCcHHHHHHHHHH-----hCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEEC--ChHhC
Confidence 011233332333333 47888999999999999999999997 45555 3332 245899887 55554
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00028 Score=65.81 Aligned_cols=103 Identities=21% Similarity=0.204 Sum_probs=64.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGD---------------NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 408 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~ 408 (668)
++.|++.++|+.|+++|++++++|+. ....+..+.+.+|+. -+.+...+......
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~------- 111 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADE------- 111 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGC-------
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCccc-------
Confidence 57899999999999999999999998 466777888888873 11111111000000
Q ss_pred hhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE-eeC
Q psy11770 409 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMG 474 (668)
Q Consensus 409 ~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI-am~ 474 (668)
.....| +..+.+.+.++ ++..++.+++|||+.+|+.+-+.||+.. .+.
T Consensus 112 ---------------~~~~KP--~p~~~~~~~~~-~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 112 ---------------CDCRKP--KVKLVERYLAE-QAMDRANSYVIGDRATDIQLAENMGINGLRYD 160 (176)
T ss_dssp ---------------CSSSTT--SCGGGGGGC-----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred ---------------ccccCC--CHHHHHHHHHH-cCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence 000111 11222222211 3566788999999999999999999864 344
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00096 Score=65.77 Aligned_cols=85 Identities=20% Similarity=0.205 Sum_probs=62.5
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNI----NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVW 418 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~----~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~ 418 (668)
.++.|++.+.++.|+++|+++.++||++. ..+..-.+++|+..-.+.
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~----------------------------- 150 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK----------------------------- 150 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT-----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc-----------------------------
Confidence 56789999999999999999999999975 477777888999432111
Q ss_pred CCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHH
Q psy11770 419 PRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPA 463 (668)
Q Consensus 419 ~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~m 463 (668)
.++.|.....|....+.+.+ .....|+++||..+|.++
T Consensus 151 ---~Lilr~~~~~K~~~r~~L~~----~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 151 ---TLLLKKDKSNKSVRFKQVED----MGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ---TEEEESSCSSSHHHHHHHHT----TTCEEEEEEESSGGGGCG
T ss_pred ---eeEecCCCCChHHHHHHHHh----cCCCEEEEECCChHHcCc
Confidence 12333333567666666642 245679999999999986
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0022 Score=62.28 Aligned_cols=117 Identities=12% Similarity=0.135 Sum_probs=76.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++| ++.++|+.....+..+.+.+|+... + .. .+
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~---------------------------f----~~-~~ 142 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE---------------------------V----EG-RV 142 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH---------------------------T----TT-CE
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh---------------------------c----Ce-eE
Confidence 57899999999999999 9999999999889999999887310 0 00 01
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCcc---CHHHHhhCCcc---EeeCCC--ccHHHHHh--cchhcccCC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN---DGPALKKADVG---FAMGIT--GTDVAKEA--SDIILTDDN 493 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~N---D~~mlk~A~vG---Iam~~~--~~~~ak~~--ad~vl~~~~ 493 (668)
... ..|..+++.+.+ +...+.+++|||+.+ |+.+-+.||+. +.-|.. ..+..++. +|+++. +
T Consensus 143 ~~~---~~K~~~~~~~~~---~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~ 214 (231)
T 2p11_A 143 LIY---IHKELMLDQVME---CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--R 214 (231)
T ss_dssp EEE---SSGGGCHHHHHH---HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--S
T ss_pred Eec---CChHHHHHHHHh---cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--C
Confidence 111 123334444432 346789999999999 66666777743 332311 22234443 788876 5
Q ss_pred chHHHHHH
Q psy11770 494 FSSIVKAV 501 (668)
Q Consensus 494 ~~~i~~~l 501 (668)
+..+.+++
T Consensus 215 ~~el~~~l 222 (231)
T 2p11_A 215 IGDLVEMD 222 (231)
T ss_dssp GGGGGGCG
T ss_pred HHHHHHHH
Confidence 66665444
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0018 Score=63.96 Aligned_cols=85 Identities=16% Similarity=0.096 Sum_probs=60.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNI----NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVW 418 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~----~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~ 418 (668)
.++.|++.+.++.|+++|+++.++||++. ..+..-.+++|+..-.++
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~----------------------------- 150 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEES----------------------------- 150 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGG-----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccccc-----------------------------
Confidence 56789999999999999999999999965 467777888998421111
Q ss_pred CCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHH
Q psy11770 419 PRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPA 463 (668)
Q Consensus 419 ~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~m 463 (668)
.++.|.....|....+.+.+. ....|+++||..+|.+.
T Consensus 151 ---~Lilr~~~~~K~~~r~~l~~~----Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 151 ---AFYLKKDKSAKAARFAEIEKQ----GYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp ---GEEEESSCSCCHHHHHHHHHT----TEEEEEEEESSGGGGCS
T ss_pred ---ceeccCCCCChHHHHHHHHhc----CCCEEEEECCChHHhcc
Confidence 122232334566666665432 23579999999999876
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0022 Score=61.65 Aligned_cols=94 Identities=13% Similarity=0.074 Sum_probs=60.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+...-+. ++.+.+. -
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~--~~~~~~~------------------------~ 147 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDA--LALSYEI------------------------K 147 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSE--EC------------------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeE--EEecccc------------------------C
Confidence 3679999999999999999999999866 47788888898422111 1111000 0
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCcc-CHHHHhhCCccEe
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN-DGPALKKADVGFA 472 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~N-D~~mlk~A~vGIa 472 (668)
..+..|+--..+.+. ++..+ ++|||+.+ |+.+.+.||+...
T Consensus 148 ~~Kp~~~~~~~~~~~-----~~~~~---~~vgD~~~~Di~~a~~aG~~~i 189 (220)
T 2zg6_A 148 AVKPNPKIFGFALAK-----VGYPA---VHVGDIYELDYIGAKRSYVDPI 189 (220)
T ss_dssp -----CCHHHHHHHH-----HCSSE---EEEESSCCCCCCCSSSCSEEEE
T ss_pred CCCCCHHHHHHHHHH-----cCCCe---EEEcCCchHhHHHHHHCCCeEE
Confidence 111222222223332 34443 89999999 9999999998755
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0041 Score=63.11 Aligned_cols=96 Identities=19% Similarity=0.131 Sum_probs=66.0
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHH---HHHHHH--------cCCccCCCceEEeehhhHHHhhhcCchhhh
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTA---RSIATK--------CGIVKPGEDYLILEGKEFNRRVRDNNGEVQ 410 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta---~~ia~~--------~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~ 410 (668)
++++.|++.++++.|+++|+++.++||+....+ ....+. .|+. -..++..+.. .
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~-~----------- 250 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---LVMQCQREQG-D----------- 250 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---CSEEEECCTT-C-----------
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---chheeeccCC-C-----------
Confidence 567899999999999999999999999986533 344445 6771 1222221110 0
Q ss_pred HHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCC-CEEEEEcCCccCHHHHhhCCccE
Q psy11770 411 QNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 411 ~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~-~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
.+..|+-|..+.+.+ ...+ +.++|+||..+|+.|-+.||+-+
T Consensus 251 --------------~kp~p~~~~~~~~~~-----~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 251 --------------TRKDDVVKEEIFWKH-----IAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp --------------CSCHHHHHHHHHHHH-----TTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred --------------CcHHHHHHHHHHHHH-----hccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 123456666666654 3333 44689999999999999999754
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0055 Score=62.89 Aligned_cols=126 Identities=17% Similarity=0.205 Sum_probs=76.2
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc----CCccCCCceEEeeh----hhH------HHhhhcCch
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC----GIVKPGEDYLILEG----KEF------NRRVRDNNG 407 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~----gi~~~~~~~i~~~g----~~~------~~~~~~~~~ 407 (668)
...+.++..+.++.|+++|++|+++||-...-+..+|..+ ||. .++++-..- ... .....+ +
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp--~e~ViG~~~~~~~~~~~~~~~~~~~~~d--g 216 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAK--PENVIGVTTLLKNRKTGELTTARKQIAE--G 216 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCC--GGGEEEECEEEECTTTCCEECHHHHHHT--T
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCC--HHHeEeeeeeeecccccccccccccccc--c
Confidence 3457899999999999999999999999999999999885 452 334433211 000 000000 0
Q ss_pred hhhHHHHhhhcCCcEEEEe-----cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhh--CCccEeeCCCccH
Q psy11770 408 EVQQNLLDKVWPRLRVLAR-----SSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKK--ADVGFAMGITGTD 479 (668)
Q Consensus 408 ~~~~~~l~~~~~~~~v~~r-----~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~--A~vGIam~~~~~~ 479 (668)
... .....+..+..+ +.-+.|...++..+ .....-++++||+ ..|.+||+. ++.|+++-.|-.+
T Consensus 217 ~y~----~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i----~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~~~ 288 (327)
T 4as2_A 217 KYD----PKANLDLEVTPYLWTPATWMAGKQAAILTYI----DRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKA 288 (327)
T ss_dssp CCC----GGGGTTCEEEEEECSSCSSTHHHHHHHHHHT----CSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECCCH
T ss_pred ccc----ccccccccccccccccccccCccHHHHHHHH----hhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEecCC
Confidence 000 000011122222 23467888887753 2344568999999 479999965 5566665444433
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.005 Score=61.17 Aligned_cols=114 Identities=12% Similarity=0.193 Sum_probs=72.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc---CCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC---GIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~---gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+ |+...-+. ++.+ +.
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~--i~~~-~~---------------------- 184 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG--HFDT-KI---------------------- 184 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSE--EECG-GG----------------------
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccE--EEec-CC----------------------
Confidence 57899999999999999999999999988877777644 35321111 1111 10
Q ss_pred cEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE-eeCC--Ccc-HHHHHhcchhcc
Q psy11770 421 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMGI--TGT-DVAKEASDIILT 490 (668)
Q Consensus 421 ~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI-am~~--~~~-~~ak~~ad~vl~ 490 (668)
. ....|+-=..+.+. ++..++.+++|||..+|+.+-+.||+-. .+.. ... +.....+|+++.
T Consensus 185 -~--~KP~p~~~~~~~~~-----lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 185 -G--HKVESESYRKIADS-----IGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp -C--CTTCHHHHHHHHHH-----HTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred -C--CCCCHHHHHHHHHH-----hCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 0 11222222223333 4778889999999999999999999643 3321 111 222345677665
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0084 Score=59.41 Aligned_cols=42 Identities=12% Similarity=0.204 Sum_probs=34.8
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCH---HHHHHHHHHcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNI---NTARSIATKCGIV 384 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~---~ta~~ia~~~gi~ 384 (668)
.++.|++.++|+.|++.|+++.++||+.. ..+....+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999984 4455556777884
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.25 E-value=0.013 Score=57.93 Aligned_cols=42 Identities=17% Similarity=0.299 Sum_probs=34.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCccC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK----CGIVKP 386 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~----~gi~~~ 386 (668)
.-+++.++++.+++.|+++.++||+...+...+++. +|+..+
T Consensus 22 ~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~ 67 (264)
T 1yv9_A 22 PIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVP 67 (264)
T ss_dssp ECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCC
T ss_pred ECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCC
Confidence 347889999999999999999999998777766664 887543
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.023 Score=55.48 Aligned_cols=93 Identities=10% Similarity=0.092 Sum_probs=63.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+... +..+.+.+|+...-+. ++.+.+..
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~--i~~~~~~~------------------------ 146 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTF--CADASQLK------------------------ 146 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSE--ECCGGGCS------------------------
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccccc--cccccccc------------------------
Confidence 4679999999999999999999998653 4566788888432221 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV 469 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v 469 (668)
..+..|+-=....+. ++..++.+++|||+.+|+.+-+.||+
T Consensus 147 ~~KP~p~~~~~a~~~-----lg~~p~e~l~VgDs~~di~aA~~aG~ 187 (243)
T 4g9b_A 147 NSKPDPEIFLAACAG-----LGVPPQACIGIEDAQAGIDAINASGM 187 (243)
T ss_dssp SCTTSTHHHHHHHHH-----HTSCGGGEEEEESSHHHHHHHHHHTC
T ss_pred CCCCcHHHHHHHHHH-----cCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 011223222222232 58889999999999999999999995
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.4 Score=44.55 Aligned_cols=15 Identities=13% Similarity=-0.091 Sum_probs=13.7
Q ss_pred cccccCceEEEEEEE
Q psy11770 129 GTLTTNRMTAVQAYV 143 (668)
Q Consensus 129 GTLT~n~m~v~~~~~ 143 (668)
||||+|++.|.++..
T Consensus 1 GTLT~G~p~V~~v~~ 15 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKV 15 (185)
T ss_dssp CCCCSCCCEEEEEEE
T ss_pred CCCcCCcEEEEEEEe
Confidence 899999999998865
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=94.60 E-value=0.076 Score=52.37 Aligned_cols=40 Identities=28% Similarity=0.353 Sum_probs=33.9
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCc
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK---CGIV 384 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~---~gi~ 384 (668)
+-+++.++++.++++|++++++||+...+...++++ +|+.
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 347899999999999999999999998777777766 4764
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=93.85 E-value=0.1 Score=56.83 Aligned_cols=98 Identities=11% Similarity=0.127 Sum_probs=60.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC------CHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGD------NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKV 417 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd------~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~ 417 (668)
++.+++.+.++.|+++|+++.++|+. ......... .|+...-+. ++.+.+..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~fd~--i~~~~~~~------------------ 157 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMHFDF--LIESCQVG------------------ 157 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTTSSE--EEEHHHHT------------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhheeE--EEeccccC------------------
Confidence 57899999999999999999999996 222222111 133211111 22222211
Q ss_pred cCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 418 WPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 418 ~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
..+..|+-=..+.+. ++...+.+++|||+.||+.+.+.||+....-
T Consensus 158 ------~~KP~p~~~~~~~~~-----lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 158 ------MVKPEPQIYKFLLDT-----LKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp ------CCTTCHHHHHHHHHH-----HTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred ------CCCCCHHHHHHHHHH-----cCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 011223322223332 4788899999999999999999999877654
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=93.29 E-value=0.026 Score=53.93 Aligned_cols=87 Identities=17% Similarity=0.177 Sum_probs=54.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK----CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~----~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
+.+++.+.++.|+++|+++.++||.....+..+.+. .+.+..+..
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~~~~------------------------------- 137 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN------------------------------- 137 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC-------------------------------
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccccccc-------------------------------
Confidence 367899999999999999999999975543333322 222100000
Q ss_pred cEEEE--ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 421 LRVLA--RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 421 ~~v~~--r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
...+. ...|+-...+.+. ++. ++++||..+|+.+-+.||+..
T Consensus 138 ~~~~~~~KP~p~~~~~~~~~-----~g~----~l~VGDs~~Di~aA~~aG~~~ 181 (211)
T 2b82_A 138 PVIFAGDKPGQNTKSQWLQD-----KNI----RIFYGDSDNDITAARDVGARG 181 (211)
T ss_dssp CCEECCCCTTCCCSHHHHHH-----TTE----EEEEESSHHHHHHHHHTTCEE
T ss_pred hhhhcCCCCCHHHHHHHHHH-----CCC----EEEEECCHHHHHHHHHCCCeE
Confidence 00111 1233333344433 222 999999999999999999753
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=93.26 E-value=0.095 Score=55.70 Aligned_cols=39 Identities=18% Similarity=0.429 Sum_probs=33.2
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCC------------HHHHHHHHHHcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDN------------INTARSIATKCGI 383 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~------------~~ta~~ia~~~gi 383 (668)
+.|++.++|+.|+++|+++.++|+.. ...+..+.+.+|+
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl 138 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV 138 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC
Confidence 67999999999999999999999965 2236677888887
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=92.98 E-value=0.026 Score=57.05 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=27.6
Q ss_pred HhhCCCcccCCchHHhh---------ccccEEEcccccccccCce
Q psy11770 101 MMKDNNLVRHLDACETM---------GNATAICSDKTGTLTTNRM 136 (668)
Q Consensus 101 l~~~~ilv~~~~~~e~l---------g~v~~i~~DKTGTLT~n~m 136 (668)
+.|.++++|++..+|.+ .++. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 47889999999999983 3343 56699999998654
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=92.84 E-value=0.12 Score=45.90 Aligned_cols=40 Identities=15% Similarity=0.110 Sum_probs=34.1
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCc
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDN---INTARSIATKCGIV 384 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~---~~ta~~ia~~~gi~ 384 (668)
+.+++.++|++|+++|++++++|||+ ...+...+++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999998 55677777788873
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=91.58 E-value=0.16 Score=49.87 Aligned_cols=92 Identities=11% Similarity=0.126 Sum_probs=59.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc--C---------CccCCCceEEeehhhHHHhhhcCchhhhHH
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC--G---------IVKPGEDYLILEGKEFNRRVRDNNGEVQQN 412 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~--g---------i~~~~~~~i~~~g~~~~~~~~~~~~~~~~~ 412 (668)
++.|++.+.++. |+++.++|+.+...+..+.+.+ | +...-..+ .+. ..
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~--f~~-~~-------------- 183 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGY--FDI-NT-------------- 183 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEE--ECH-HH--------------
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceE--Eee-ec--------------
Confidence 567888888877 9999999999998888877766 4 21100000 000 00
Q ss_pred HHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 413 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 413 ~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
. -....|+-=..+.+. ++..++.+++|||+.+|+.+-+.||+-.
T Consensus 184 ------~----g~KP~p~~~~~a~~~-----lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 184 ------S----GKKTETQSYANILRD-----IGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp ------H----CCTTCHHHHHHHHHH-----HTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred ------c----CCCCCHHHHHHHHHH-----cCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 0 012233322223333 4778889999999999999999999654
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=90.75 E-value=0.014 Score=54.96 Aligned_cols=40 Identities=15% Similarity=0.012 Sum_probs=34.7
Q ss_pred CCCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCC
Q psy11770 344 PVRPEVPEAIKKCQRA-GITIRMVTGDNINTARSIATKCGI 383 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~gi 383 (668)
++.|++.+.++.|++. |+++.++|+.....+....+++|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5789999999999999 999999999988777666776666
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.87 E-value=0.066 Score=50.43 Aligned_cols=93 Identities=13% Similarity=0.063 Sum_probs=65.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCce-EEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDY-LILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~-i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.+||++.+.++.|++. +++++.|.-....|..+.+.+++.. .+ ..+.+++..
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~---~f~~~l~rd~~~----------------------- 120 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWG---VFRARLFRESCV----------------------- 120 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSS---CEEEEECGGGCE-----------------------
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcc---cEEEEEEcccce-----------------------
Confidence 4799999999999998 9999999999999999999999842 11 111111110
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
..|...++.+. .++...+.|++++|..++..+-+.+++-|.
T Consensus 121 -------~~k~~~lK~L~--~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 121 -------FHRGNYVKDLS--RLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp -------EETTEEECCGG--GSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred -------ecCCceeeeHh--HhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 01111222221 146677889999999999988777766653
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=87.49 E-value=0.084 Score=49.05 Aligned_cols=92 Identities=13% Similarity=0.064 Sum_probs=64.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceE-EeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYL-ILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i-~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.+||++.+.++.+++. +++++.|.-....|..+.+.++... .+- .+.+++..
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~---~f~~~~~rd~~~----------------------- 107 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG---AFRARLFRESCV----------------------- 107 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC---CEEEEECGGGSE-----------------------
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC---cEEEEEeccCce-----------------------
Confidence 4799999999999998 9999999999999999999998732 111 11111100
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
..|...++.+. .++...+.|++|||..+|..+-..+++-|
T Consensus 108 -------~~k~~~~k~L~--~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 108 -------FHRGNYVKDLS--RLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp -------EETTEEECCGG--GTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred -------ecCCcEeccHH--HhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 01111222221 14667788999999999998877777665
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=83.27 E-value=1.3 Score=40.30 Aligned_cols=25 Identities=24% Similarity=0.348 Sum_probs=23.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGD 369 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd 369 (668)
++.|++.+.++.|++. +++.++|+.
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCC
Confidence 5789999999999984 999999997
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=82.34 E-value=1.2 Score=38.21 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=26.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINT 373 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~t 373 (668)
++.+++.+++++++++|++++++||+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 467889999999999999999999998643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 668 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 3e-39 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-32 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 7e-29 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 6e-25 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 6e-20 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 4e-23 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 8e-19 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-17 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-10 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 4e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 1e-06 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-06 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 8e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 2e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 3e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 6e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.004 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 140 bits (353), Expect = 3e-39
Identities = 70/178 (39%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Query: 329 IVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE 388
I S T DP R EV +I+ C+ AGI + M+TGDN TA +I + GI E
Sbjct: 5 ICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENE 64
Query: 389 DY--LILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISA 446
+ G+EF+ + R AR PS K +V+ + +
Sbjct: 65 EVADRAYTGREFDDLPLAEQ--------REACRRACCFARVEPSHKSKIVEYLQ-----S 111
Query: 447 GREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWG 504
E+ A+TGDG ND PALKKA++G AMG +GT VAK AS+++L DDNFS+IV AV G
Sbjct: 112 YDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 126 bits (318), Expect = 3e-32
Identities = 46/406 (11%), Positives = 109/406 (26%), Gaps = 69/406 (16%)
Query: 107 LVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIV 166
+ L +G + I + + ++ K K + +
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKL--KSLGLNSNWDML-- 81
Query: 167 EGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRV 226
I+ + ++ K++ + A + + Q + +L +
Sbjct: 82 -----------FIVFSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLN- 129
Query: 227 YTFNSVRKSMSTV-IPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRN 285
+ + V + K N Y + A+ + + + ++
Sbjct: 130 --EQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDATL----------------FSLKG 171
Query: 286 VIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPV 345
+ +A + + + K + D E I I E +
Sbjct: 172 ALWTLAQEVYQEWYLGSKLYE-----------------DVEKKIARTTFKTGYIYQEIIL 214
Query: 346 --RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVR 403
EV + + AG + + TG G++ E I +
Sbjct: 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAEN 274
Query: 404 DNNGEVQQNLLDK-VWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGP 462
+ + + Y + I +K + V + GD D
Sbjct: 275 MYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNK-----DDVFIVGDSLADLL 329
Query: 463 ALKKAD---VGFAMGITGTDVAKE----ASDIILTDDNFSSIVKAV 501
+ +K +G G+ G D A E +D ++ ++ + +
Sbjct: 330 SAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 112 bits (281), Expect = 7e-29
Identities = 32/221 (14%), Positives = 71/221 (32%), Gaps = 19/221 (8%)
Query: 136 MTAVQAYVCEVQYK------NIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELP 189
MT + ++ D + + + + K +
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 190 KQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNG---Y 246
G+ +E ALL + + + +RD P+ +FNS K ++ +++ +
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPK---VAEISFNSTNKYQLSIHEREDNPQSH 118
Query: 247 RVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFV 306
+ KGA E IL +CS I + + + +N + G R + +
Sbjct: 119 VLVMKGAPERILDRCSSILVQGKEIPLDKEMQD--AFQNAYLELGGLGERVLGFCQLNLP 176
Query: 307 TDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRP 347
+ K + D+ + L + ++ + D
Sbjct: 177 SGKFPRGF-----KFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 106 bits (265), Expect = 6e-25
Identities = 43/214 (20%), Positives = 81/214 (37%), Gaps = 31/214 (14%)
Query: 462 PALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTV 521
P A + + + +AK+ + + S+ GR +Y+++ +F+++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 522 NVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKA 581
NV V+ F+ A L VQ+LWVNL+ D L + AL P D++ R P +
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 582 LISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSL--------------- 626
LIS + + Y G + + G G Y L
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWW--FMYAEDGPGVTYHQLTHFMQCTEDHPHFEG 363
Query: 627 -------PTQHFTIIFNTFVLMTLFNEINARKIH 653
+ T+ + V + + N +N+ +
Sbjct: 364 LDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN 397
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 90.9 bits (225), Expect = 6e-20
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 9/140 (6%)
Query: 9 KHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFV 68
++ K+ LQ KL + Q+ S I + +I I D + R +
Sbjct: 126 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGH-------FNDPVHGGSWIRGAI 178
Query: 69 RFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK- 127
+F + V + V A+PEGLP +T LA ++M K N +VR L + ET+G A +
Sbjct: 179 YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQF 238
Query: 128 -TGTLTTNRMTAVQAYVCEV 146
+++N V ++
Sbjct: 239 IRYLISSNVGEVVCIFLTAA 258
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 93.2 bits (231), Expect = 4e-23
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 44/173 (25%)
Query: 329 IVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE 388
++ T G D ++ A+++ +R GI + M+TGDN +A +I+ + +
Sbjct: 6 VIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA 65
Query: 389 DYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGR 448
+ P K VK + +
Sbjct: 66 EV-------------------------------------LPHQKSEEVKKL------QAK 82
Query: 449 EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
EVVA GDG ND PAL +AD+G A+G +G+DVA E+ DI+L D+ +V A+
Sbjct: 83 EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 83.8 bits (206), Expect = 8e-19
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 25/179 (13%)
Query: 182 PENANELPKQVGNKTECALLGFVVAIGKNYQTVRD-----------DLPEEVFTRVYT-- 228
+ ++VG TE AL V + VR+ + ++ + +T
Sbjct: 67 FNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLE 126
Query: 229 FNSVRKSMSTVIPKKNG------YRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRL 282
F+ RKSMS +++ KGA E ++ +C+Y+ + + L
Sbjct: 127 FSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKIL 186
Query: 283 VRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGI 341
D LR +++A +D + E+ + + LT + V+G+
Sbjct: 187 SVIKEWGTGRDTLRCLALATRDTPPKREEMVL------DDSSRFMEYETDLTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 78.9 bits (193), Expect = 4e-17
Identities = 31/242 (12%), Positives = 67/242 (27%), Gaps = 31/242 (12%)
Query: 277 DMQGRLVRN-----VIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVS 331
D G + N +++ A + E P+ E
Sbjct: 10 DFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEE---- 65
Query: 332 HLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYL 391
+ + +R E + I +++G +
Sbjct: 66 ---ITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVE-------- 114
Query: 392 ILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVV 451
+ N DN+ +D + K +++ ++S + +
Sbjct: 115 -KDRIYCNHASFDND----YIHIDWPHSCKGTCSNQCGCCKPSVIH-----ELSEPNQYI 164
Query: 452 AVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSI 511
+ GD D A K +D+ FA + +E + L +F I K + + V + +
Sbjct: 165 IMIGDSVTDVEAAKLSDLCFARDY-LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWL 223
Query: 512 SK 513
Sbjct: 224 QN 225
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 59.6 bits (143), Expect = 2e-10
Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 46/202 (22%)
Query: 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRD 404
+ + EAI++ + GI I +VTG+ + A + + G P +R+
Sbjct: 20 IHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFL 79
Query: 405 NNGEVQQNLLDKVWPRL--RVLARSSPSDKYTLVKGMIDSKISAGREV------------ 450
+ + + L +++ R + + P + LV + RE+
Sbjct: 80 ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVD 139
Query: 451 -------------------------------VAVTGDGTNDGPALKKADVGFAMGITGTD 479
VA GDG ND A K A+
Sbjct: 140 SGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPK 198
Query: 480 VAKEASDIILTDDNFSSIVKAV 501
+ KE +D + + +A+
Sbjct: 199 ILKENADYVTKKEYGEGGAEAI 220
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 49.2 bits (116), Expect = 4e-07
Identities = 26/203 (12%), Positives = 55/203 (27%), Gaps = 44/203 (21%)
Query: 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKP---GEDYLILEGKEF 398
+ + + E+I+ ++ G+T+ +++G+ I ++ GI P ++ +
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 399 NRRVRDNNG-----------------------------EVQQNLLDKVWPRLRVLARSSP 429
++ N G ++ +D V
Sbjct: 78 IKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIF 137
Query: 430 SDKYTLVKGMIDSKISAGREV-----------VAVTGDGTNDGPALKKADVGFAMGITGT 478
Y+ + + V GD ND P + T
Sbjct: 138 YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NAT 196
Query: 479 DVAKEASDIILTDDNFSSIVKAV 501
D K SD + I +
Sbjct: 197 DNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.5 bits (112), Expect = 1e-06
Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Query: 449 EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502
V GD ND L +A G +V +E + + + +
Sbjct: 146 YRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFL 197
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (109), Expect = 3e-06
Identities = 22/156 (14%), Positives = 47/156 (30%), Gaps = 20/156 (12%)
Query: 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK 396
+ + P + E + + Q + + +++G + +A+K +
Sbjct: 75 LIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLN---IPATNVFANRL 131
Query: 397 EFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGD 456
+F + Q + S V ++ K + ++ GD
Sbjct: 132 KFYFNGEYAGFDETQPTAE--------------SGGKGKVIKLLKEKFHFKKIIM--IGD 175
Query: 457 GTNDGPALKKADVGFAMG-ITGTDVAKEASDIILTD 491
G D A AD G K+ + +TD
Sbjct: 176 GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 44.8 bits (104), Expect = 1e-05
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 455 GDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
GDG ND KKA + A + KE +DI + + I+K +
Sbjct: 165 GDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILKYI 209
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 42.6 bits (99), Expect = 8e-05
Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 4/147 (2%)
Query: 368 GDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARS 427
+ + + + I + + E V D ++ V +
Sbjct: 126 AKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLI 185
Query: 428 SPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI 487
P + + + V GD ND LK A FAMG + K+ +
Sbjct: 186 IPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARY 244
Query: 488 ILTDDNFSSIVKAVMWGRNVYDSISKF 514
D+N + + + V D+ F
Sbjct: 245 ATDDNNHEGALNVI---QAVLDNTYPF 268
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 42.3 bits (98), Expect = 1e-04
Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 1/118 (0%)
Query: 385 KPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKI 444
+ +I+ ++ V N + +N L + +
Sbjct: 160 RTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY 219
Query: 445 SAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502
+ + V V GD ND L FA+ TD AK + +L + V ++
Sbjct: 220 NISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLL 276
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 449 EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
E AV GD ND L+ A G AMG + K +D + ++ + +
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMM 281
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.1 bits (95), Expect = 2e-04
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 490
K + +I E ++ GDG ND L+ A +G AMG + K A+D +
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSF-GDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTA 243
Query: 491 DDNFSSIVKAV 501
+ I KA+
Sbjct: 244 PIDEDGISKAM 254
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (95), Expect = 3e-04
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 448 REVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
E + GD ND ++ A VG A+ KE ++ + + + A+
Sbjct: 213 PEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAI 265
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 40.0 bits (92), Expect = 6e-04
Identities = 21/112 (18%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Query: 390 YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGRE 449
L+++ E +++ E ++++ L + + +++ +E
Sbjct: 148 LLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKE 207
Query: 450 VVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501
+ V GD ND ++A + AM + KEASDI+ +N S + +
Sbjct: 208 EIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVL 258
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 37.0 bits (84), Expect = 0.004
Identities = 23/81 (28%), Positives = 29/81 (35%)
Query: 408 EVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 467
EV KV R SDK K ++D G+ GD ND P +
Sbjct: 156 EVLVEGGFKVTMGSRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVV 215
Query: 468 DVGFAMGITGTDVAKEASDII 488
D F +G A+ S II
Sbjct: 216 DKVFIVGSLKHKKAQNVSSII 236
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 668 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.96 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.93 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.93 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.89 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.78 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.53 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.5 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.5 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.46 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.43 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.4 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.36 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.35 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.34 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.29 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.17 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.15 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.08 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.05 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.05 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.04 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.93 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.75 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.51 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.14 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.99 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.88 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.79 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.75 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.65 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.63 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.58 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.54 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.33 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.27 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.25 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 97.18 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.14 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.94 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.94 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.89 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.86 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.7 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 96.23 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.21 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 96.18 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 95.94 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.94 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.91 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.78 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.53 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 95.4 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.14 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 94.17 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 93.29 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 91.05 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=4.6e-30 Score=237.59 Aligned_cols=148 Identities=45% Similarity=0.661 Sum_probs=131.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCce--EEeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDY--LILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~--i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
||+|++++++|+.|+++||++||+|||+..||.++|+++||..++... ..++|.++... ....+.+...+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~--------~~~~~~~~~~~ 90 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL--------PLAEQREACRR 90 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHS--------CHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchh--------hHHHHhhhhhh
Confidence 999999999999999999999999999999999999999998765442 24667776543 33444555566
Q ss_pred cEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHH
Q psy11770 421 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKA 500 (668)
Q Consensus 421 ~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~ 500 (668)
..+|+|++|++|..+|+.+ +..|++|+|+|||.||++||++|||||+|+ ++++.++++||+++.+++|..+.++
T Consensus 91 ~~v~ar~~p~~K~~lv~~l-----~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~ 164 (168)
T d1wpga2 91 ACCFARVEPSHKSKIVEYL-----QSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAA 164 (168)
T ss_dssp CCEEESCCHHHHHHHHHHH-----HHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHH
T ss_pred hhhhhccchhHHHHHHHHH-----HhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHH
Confidence 7899999999999999997 456899999999999999999999999999 9999999999999999999999999
Q ss_pred HHHH
Q psy11770 501 VMWG 504 (668)
Q Consensus 501 l~~g 504 (668)
|+||
T Consensus 165 I~~G 168 (168)
T d1wpga2 165 VEEG 168 (168)
T ss_dssp HHHH
T ss_pred HHcC
Confidence 9997
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=6.4e-29 Score=241.11 Aligned_cols=203 Identities=18% Similarity=0.143 Sum_probs=145.8
Q ss_pred eEEEEEEEcCEEEecCCC------CCCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCC
Q psy11770 136 MTAVQAYVCEVQYKNIPK------YEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGK 209 (668)
Q Consensus 136 m~v~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~ 209 (668)
|+|+++|.++..+..... ......+..+.+..++++|+...-...........+...|||+|.||+.++.+.|.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~ 81 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG 81 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHS
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCC
Confidence 999999999998764321 11223344556777776665542110000111123456899999999999999999
Q ss_pred ChHHHhhhCCccceeeeeccCCCCceEEEEEee---CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHH
Q psy11770 210 NYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK---KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNV 286 (668)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~---~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (668)
+....+..++ .+.++||+|+||||+++++. ++++++|+|||||+|+++|++++. +|...+++++.++.+ .+.
T Consensus 82 ~~~~~r~~~~---~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i-~~~ 156 (214)
T d1q3ia_ 82 SVRKMRDRNP---KVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAF-QNA 156 (214)
T ss_dssp CHHHHHHTSC---EEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHH-HHH
T ss_pred CHHHHHhhCc---EeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHH-HHH
Confidence 9888888776 47889999999999999986 356899999999999999999875 788899999888774 688
Q ss_pred HHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCc
Q psy11770 287 IEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPE 348 (668)
Q Consensus 287 ~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~ 348 (668)
+++|+++|+||||+|||.++.+++..+.. .+..+.+..|+||+|+|++|++||+|++
T Consensus 157 ~~~~a~~GlRvLa~A~k~l~~~~~~~~~~-----~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 157 YLELGGLGERVLGFCQLNLPSGKFPRGFK-----FDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHHHHHTTCEEEEEEEEEECTTTSCTTCC-----CCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred HHHHhhCCcEEEEEEEEecCccccccccc-----cChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 89999999999999999998765433211 1122335568999999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=8.9e-27 Score=206.59 Aligned_cols=125 Identities=38% Similarity=0.609 Sum_probs=107.6
Q ss_pred EEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHH
Q psy11770 334 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL 413 (668)
Q Consensus 334 ~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~ 413 (668)
+..+.++++|++|++++++|+.|+++||+++|+|||+.++|.++|+++||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 344578899999999999999999999999999999999999999999993
Q ss_pred HhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCC
Q psy11770 414 LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 493 (668)
Q Consensus 414 l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~ 493 (668)
.++++++|++|..+++.+ | .++.|+|+|||.||+|||++||+||+|+ ++++.++++||+++.+++
T Consensus 62 --------~v~~~~~p~~k~~~v~~~-----q-~~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~ 126 (135)
T d2b8ea1 62 --------LVIAEVLPHQKSEEVKKL-----Q-AKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDD 126 (135)
T ss_dssp --------EEECSCCHHHHHHHHHHH-----T-TTSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCC
T ss_pred --------hhccccchhHHHHHHHHH-----H-cCCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCC
Confidence 589999999999999985 3 3568999999999999999999999999 899999999999999999
Q ss_pred chHHHHHHH
Q psy11770 494 FSSIVKAVM 502 (668)
Q Consensus 494 ~~~i~~~l~ 502 (668)
+..|.++|+
T Consensus 127 l~~i~~aI~ 135 (135)
T d2b8ea1 127 LRDVVAAIQ 135 (135)
T ss_dssp THHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998773
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.93 E-value=4.1e-31 Score=279.59 Aligned_cols=329 Identities=13% Similarity=0.057 Sum_probs=210.1
Q ss_pred CchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcc
Q psy11770 111 LDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPK 190 (668)
Q Consensus 111 ~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (668)
+.+.|+||..+++|+|||||+|.|+|++..+..+...... +....+.+ .+.. .....|+... ...
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~--k~~g~n~~-~dl~-~~~~~~~~~~-----------~~~ 94 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKL--KSLGLNSN-WDML-FIVFSIHLID-----------ILK 94 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHH--HHTTCCCH-HHHH-HHHHHHHHHH-----------HHT
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhh--hhcCCChh-HHHH-HHHHHHHHHH-----------HHh
Confidence 4556999999999999999999999976432211000000 00001111 1111 1111111000 012
Q ss_pred cccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEee-CCeEEEEEcCchHHHHhhcccccccCC
Q psy11770 191 QVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNG 269 (668)
Q Consensus 191 ~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~-~~~~~~~~KGa~e~il~~c~~~~~~~~ 269 (668)
..++|++.+++......+......+..++. ....||+|.+|+|+++... ++.+..+.||+++.+.-.. .
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~~~-------~ 164 (380)
T d1qyia_ 95 KLSHDEIEAFMYQDEPVELKLQNISTNLAD---CFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSD-------A 164 (380)
T ss_dssp TSCHHHHHHHHHCSSCHHHHHTTSGGGCSS---CCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTCSC-------C
T ss_pred hcCCCcHHHHHHHHhhccchHHHHHHhccc---cccCCcchHHHHHhhhcccccchhHhhhhccHhhcCCcH-------H
Confidence 235677777765433222222333333332 4568999999999987665 3344455677776552111 1
Q ss_pred ccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCC--
Q psy11770 270 HLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRP-- 347 (668)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~-- 347 (668)
.. .+ ++..++.++++|+|++++|++.++..+.. ...+....|++..+++++|
T Consensus 165 ~~--------~~-~~~~~~~~a~~~~r~l~~~~~~~~~~~~~-----------------~~~~~~~~g~i~~~~~i~p~~ 218 (380)
T d1qyia_ 165 TL--------FS-LKGALWTLAQEVYQEWYLGSKLYEDVEKK-----------------IARTTFKTGYIYQEIILRPVD 218 (380)
T ss_dssp GG--------GS-TTCHHHHHHHHHHHHHHHHHHHHHHHHCS-----------------CCSCSSCCCTTTTCCBSSCHH
T ss_pred HH--------HH-HHhHHHHHHHHHHHHHHHhhhcccccccc-----------------cchhhHhcccccccccccchh
Confidence 11 11 23556889999999999998876433210 0122344588888898665
Q ss_pred chHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhc-----CchhhhHHHHhhhcCCcE
Q psy11770 348 EVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRD-----NNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 348 ~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~-----~~~~~~~~~l~~~~~~~~ 422 (668)
+++++|+.|+++|++++|+|||+..+|..+++++|+........++++.+....... .....+.+.+.. ..
T Consensus 219 ~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~----~~ 294 (380)
T d1qyia_ 219 EVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA----AL 294 (380)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH----HH
T ss_pred hHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHH----HH
Confidence 999999999999999999999999999999999999654333334555554322111 011111122211 13
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC---ccEeeCCCccHHHHH----hcchhcccCCch
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD---VGFAMGITGTDVAKE----ASDIILTDDNFS 495 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~---vGIam~~~~~~~ak~----~ad~vl~~~~~~ 495 (668)
.++|.+|++|..+++.+ +..++.|+|+|||.||++|+|.|| |||+||..+++..++ .||+++. ++.
T Consensus 295 ~~~~~~~~~k~~iv~~~-----~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~--~~~ 367 (380)
T d1qyia_ 295 YGNNRDKYESYINKQDN-----IVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLG 367 (380)
T ss_dssp HCCCGGGHHHHHHCCTT-----CSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGG
T ss_pred HHcCCCHHHHHHHHHHh-----CCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEEC--CHH
Confidence 46789999999999874 889999999999999999999999 999999777765443 7999997 788
Q ss_pred HHHHHH
Q psy11770 496 SIVKAV 501 (668)
Q Consensus 496 ~i~~~l 501 (668)
.+.++|
T Consensus 368 el~~il 373 (380)
T d1qyia_ 368 ELRGVL 373 (380)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 887765
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.89 E-value=2.1e-23 Score=205.48 Aligned_cols=170 Identities=21% Similarity=0.258 Sum_probs=123.2
Q ss_pred HHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhh-------------CCccceeeee
Q psy11770 161 IASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDD-------------LPEEVFTRVY 227 (668)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~-------------~~~~~~~~~~ 227 (668)
..+.++.++++|+... +.. ...+..+...|+|+|.||+.++.+.|.+....+.. ...+..+.++
T Consensus 49 ~l~~ll~~~~LCn~a~--l~~-~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 125 (239)
T d1wpga3 49 GLVELATICALCNDSS--LDF-NETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTL 125 (239)
T ss_dssp HHHHHHHHHHHSCSCE--EEE-ETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEE
T ss_pred HHHHHHHHHHhcCCCE--eee-cCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEe
Confidence 3455666666666533 111 12234567889999999999999988765432110 0123457889
Q ss_pred ccCCCCceEEEEEeeCC------eEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHH--hhhcceeeE
Q psy11770 228 TFNSVRKSMSTVIPKKN------GYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPM--ACDGLRTIS 299 (668)
Q Consensus 228 ~F~s~rk~msvvv~~~~------~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~GlRvl~ 299 (668)
||+|+||||+|+++.++ .+++|+|||||.|+++|+.++. ++...+++++.++.+. +.++++ +++|+||||
T Consensus 126 pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~-~~~~~~~~a~~glRvLa 203 (239)
T d1wpga3 126 EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKIL-SVIKEWGTGRDTLRCLA 203 (239)
T ss_dssp EEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHH-HHHHHHTTSSCCCEEEE
T ss_pred eecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHH-HHHHHHhHhhCCCEEEE
Confidence 99999999999998732 4789999999999999998875 6777899999888764 556665 789999999
Q ss_pred EEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEee
Q psy11770 300 IAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGI 341 (668)
Q Consensus 300 ~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~ 341 (668)
+|||.++.++.... ..+....+++|+||+|+|++||
T Consensus 204 ~A~k~~~~~~~~~~------~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 204 LATRDTPPKREEMV------LDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEESSCCCGGGCC------TTCGGGHHHHTCSEEEEEEEEE
T ss_pred EEEEECCccccccc------ccchhhHHHhcCCCEEEEEECC
Confidence 99999986643221 1112234578999999999986
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.78 E-value=5.1e-19 Score=191.43 Aligned_cols=171 Identities=21% Similarity=0.310 Sum_probs=138.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccc
Q psy11770 493 NFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLL 572 (668)
Q Consensus 493 ~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~ 572 (668)
+...+.. .||.++.|++|++.|.++.|+..++..+++.++..+.|+++.|+||+|+++|++|+++++.|||++++|+
T Consensus 220 ~L~avE~---~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~ 296 (472)
T d1wpga4 220 SLPSVET---LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMD 296 (472)
T ss_dssp CTTHHHH---HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGG
T ss_pred hHHHHHH---HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhc
Confidence 4444443 5999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCC-------------CCCCC-------CCcccchhh
Q psy11770 573 RKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTG-------------RGAEY-------GSLPTQHFT 632 (668)
Q Consensus 573 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-------~~~~~~~~t 632 (668)
++|+++++++++++++.+++.++++.+++.+..+++.........+ .+.+. ......++|
T Consensus 297 ~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T 376 (472)
T d1wpga4 297 RPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMT 376 (472)
T ss_dssp SCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHH
T ss_pred CCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHH
Confidence 9999999999999999999999999887776665554322111000 00000 011245789
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCcccc-cccccCCCC
Q psy11770 633 IIFNTFVLMTLFNEINARKIHGQRNVF-EGLFTTHSV 668 (668)
Q Consensus 633 ~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~~n~~~ 668 (668)
++|++++++|++|.+++|+.+. ++| .++++|+++
T Consensus 377 ~~F~~lv~~q~~~~~~~rs~~~--s~~~~~~~~N~~l 411 (472)
T d1wpga4 377 MALSVLVTIEMCNALNSLSENQ--SLMRMPPWVNIWL 411 (472)
T ss_dssp HHHHHHHHHHHHHHHTTSCSSC--CTTTSCGGGCHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCc--chhhcCccccHHH
Confidence 9999999999999999998764 455 588899763
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.53 E-value=1.8e-14 Score=139.54 Aligned_cols=156 Identities=20% Similarity=0.258 Sum_probs=114.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH----------------------HHh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF----------------------NRR 401 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~----------------------~~~ 401 (668)
.+.+.+.++|++|+++|++++++|||+...+..++..+++.. .++..+|..+ ...
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~---~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKR 95 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCc---ccccccceeeeccccccccccccHHHHHHHHHHHh
Confidence 578899999999999999999999999999999999998842 2333232211 000
Q ss_pred hhcC--------------------chhhhHHHHhhhcCCcE-------EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEE
Q psy11770 402 VRDN--------------------NGEVQQNLLDKVWPRLR-------VLARSSPSDKYTLVKGMIDSKISAGREVVAVT 454 (668)
Q Consensus 402 ~~~~--------------------~~~~~~~~l~~~~~~~~-------v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~i 454 (668)
.... ......+.+++...... +-......+|...++.++.+ ++...+.|+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~-~~i~~~~~~~i 174 (230)
T d1wr8a_ 96 FPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEF-LGIKPKEVAHV 174 (230)
T ss_dssp CTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHH-HTSCGGGEEEE
T ss_pred cccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccc-cccchhheeee
Confidence 0000 00011122222222221 22233456899999988665 68888999999
Q ss_pred cCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHH
Q psy11770 455 GDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWG 504 (668)
Q Consensus 455 GDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~g 504 (668)
|||.||++|++.||+||||+ |+++.+|++||+++.+++.+++.++|++.
T Consensus 175 GD~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 175 GDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp ECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred ecCccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 99999999999999999999 99999999999999998999999988764
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=2.1e-14 Score=143.18 Aligned_cols=158 Identities=18% Similarity=0.290 Sum_probs=113.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH----------------------
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR---------------------- 400 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~---------------------- 400 (668)
.++.+.+.++|++|+++|++++++|||++..+..+.+++++..+...++..+|..+..
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~ 99 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 99 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH
Confidence 3588999999999999999999999999999999999999876544444444421100
Q ss_pred hhhc---------C--------c--------------------------------------hhhhHHHHhhhc----CCc
Q psy11770 401 RVRD---------N--------N--------------------------------------GEVQQNLLDKVW----PRL 421 (668)
Q Consensus 401 ~~~~---------~--------~--------------------------------------~~~~~~~l~~~~----~~~ 421 (668)
.... . . .....+.+..+. ...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 0000 0 0 000000011000 011
Q ss_pred EE------EEecCH--hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCC
Q psy11770 422 RV------LARSSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN 493 (668)
Q Consensus 422 ~v------~~r~~p--~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~ 493 (668)
.+ +....| .+|...++.+++. ++.+.+.++++|||.||.+||+.|++|+||+ |+.+.+|+.||+++.+++
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~-~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~ 257 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADV-LGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNL 257 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTT
T ss_pred EEEEecCceEEecCCCCCcccccceehhh-cccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCC
Confidence 11 112233 3799999988765 5778888999999999999999999999999 999999999999999888
Q ss_pred chHHHHHHH
Q psy11770 494 FSSIVKAVM 502 (668)
Q Consensus 494 ~~~i~~~l~ 502 (668)
-+++.++|+
T Consensus 258 ~~Gv~~~l~ 266 (271)
T d1rkqa_ 258 EDGVAFAIE 266 (271)
T ss_dssp TTHHHHHHH
T ss_pred cChHHHHHH
Confidence 899999886
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.50 E-value=2.7e-14 Score=138.40 Aligned_cols=157 Identities=17% Similarity=0.186 Sum_probs=112.3
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH----------------HHhh---
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF----------------NRRV--- 402 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~----------------~~~~--- 402 (668)
+.++.+++.++++.|++.|++++++|||+...+..++..+|+.. .++..+|..+ ....
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEM 94 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccEEEecChHHHHHHHHHH
Confidence 34578899999999999999999999999999999999999843 2332222110 0000
Q ss_pred hcC--------------------chhhhHHHHhhhc-CCcEEE-------EecCHhhHHHHHHHHHHhhcCCCCCEEEEE
Q psy11770 403 RDN--------------------NGEVQQNLLDKVW-PRLRVL-------ARSSPSDKYTLVKGMIDSKISAGREVVAVT 454 (668)
Q Consensus 403 ~~~--------------------~~~~~~~~l~~~~-~~~~v~-------~r~~p~~K~~iv~~l~~~~~~~~~~~v~~i 454 (668)
... ............. ....++ -.....+|...++.++++ ++.+.+.|+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~-~~i~~~~v~~~ 173 (225)
T d1l6ra_ 95 SKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEM-YSLEYDEILVI 173 (225)
T ss_dssp TTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHH-TTCCGGGEEEE
T ss_pred HHhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhh-hccchhheeee
Confidence 000 0000001111111 111121 112345899999888665 68888899999
Q ss_pred cCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 455 GDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 455 GDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
|||.||.+|++.||+||||+ |+.+.+++.||+++..++.+++.+++++
T Consensus 174 GDs~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 174 GDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp CCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred cCCcchHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999864
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.46 E-value=2.9e-13 Score=135.65 Aligned_cols=71 Identities=23% Similarity=0.296 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.++++ ++.+.+.|+++|||.||.+||+.|+.||||+ |+++.+++.||+++.+++.+++.++|++
T Consensus 213 ~K~~ai~~l~~~-~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQ-LNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHH-TTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhh-cccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 799999988765 6888889999999999999999999999999 9999999999999998899999998864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.43 E-value=2.1e-13 Score=135.61 Aligned_cols=71 Identities=23% Similarity=0.318 Sum_probs=65.5
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.+|...++.++++ ++...+.|+++|||.||.+||+.|+.||||+ |+.+.+|+.|++++.+++-+++.+.|+
T Consensus 189 ~sK~~al~~l~~~-lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 189 LHKANGISRLLKR-WDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp CSHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHhhh-hccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 3699999988765 6888889999999999999999999999999 999999999999999999999998886
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.40 E-value=2.6e-13 Score=134.40 Aligned_cols=72 Identities=28% Similarity=0.330 Sum_probs=66.4
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
.+|...++.+.++ ++...+.++++|||.||++||+.||.||||+ |+.+.+|+.||+++.+++-+++.++|++
T Consensus 185 ~sK~~al~~l~~~-~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRH-FGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHh-ccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 3799999988765 6888899999999999999999999999999 9999999999999999889999999975
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.36 E-value=3.9e-14 Score=152.57 Aligned_cols=123 Identities=28% Similarity=0.437 Sum_probs=96.3
Q ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhccCchH
Q psy11770 8 EKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVPEGLP 87 (668)
Q Consensus 8 ~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~iP~~Lp 87 (668)
.....+++|+|+++++++..++..+.+++...+.+.+..+ .....+..| ...+.+.++.+++++++++|||||
T Consensus 125 ~~~~~~~~P~d~~l~~~g~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~ai~l~V~~iPEgLp 197 (472)
T d1wpga4 125 AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF---NDPVHGGSW----IRGAIYYFKIAVALAVAAIPEGLP 197 (472)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTS---SSCCSSSCS----SSCGGGHHHHHHHHHHHHSCTTHH
T ss_pred ccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhhhhh----HHHHHHHHHHHHHHHHHhChhhHH
Confidence 3455678999999999999998877666655443321110 001112222 112356788899999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccc--cccccCceE
Q psy11770 88 LAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKT--GTLTTNRMT 137 (668)
Q Consensus 88 ~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKT--GTLT~n~m~ 137 (668)
+++|+++++|++||+|+|++||+++++|++|+..+.|+||| +|||.|.+.
T Consensus 198 ~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~ 249 (472)
T d1wpga4 198 AVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGE 249 (472)
T ss_dssp HHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHH
Confidence 99999999999999999999999999999999999999998 999999764
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.35 E-value=1.4e-12 Score=130.12 Aligned_cols=71 Identities=25% Similarity=0.336 Sum_probs=60.9
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccC-CchHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDD-NFSSIVKAVM 502 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~-~~~~i~~~l~ 502 (668)
..|...++.+.+. ++...+.|+++|||.||.+||+.||+||||+ |+.+.+|+.||+++..+ +..++.++++
T Consensus 206 ~~K~~~l~~l~~~-~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKH-YNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHH-TTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred chhHHHHHHHhhh-cccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 3788888877665 6788889999999999999999999999999 99999999999999754 4556777775
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.34 E-value=9.5e-13 Score=130.77 Aligned_cols=70 Identities=27% Similarity=0.304 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
+|...++.+.++ ++.....|+++|||.||.+||+.||+||||+ |+.+.+|++||+++.+++.++++++|+
T Consensus 190 ~K~~ai~~l~~~-~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRER-MNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHH-HTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHh-hccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 799999988765 6888889999999999999999999999999 999999999999999999999998875
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.29 E-value=5e-12 Score=116.53 Aligned_cols=109 Identities=21% Similarity=0.233 Sum_probs=91.1
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHh
Q psy11770 351 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 430 (668)
Q Consensus 351 ~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~ 430 (668)
.+|+.|+..|+.+.++||+....+...++++++. .++. ...
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~-------------------------------------~~~~--~~~ 79 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK-------------------------------------LFFL--GKL 79 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC-------------------------------------EEEE--SCS
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccc-------------------------------------cccc--ccc
Confidence 5799999999999999999999999999999983 1222 334
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH-HHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS-IVKA 500 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~-i~~~ 500 (668)
+|...++.+.++ ++...+.|+++||+.||.+||+.|++|+||+ ++.+.+|+.||+|+..+.-.+ +.++
T Consensus 80 ~K~~~l~~~~~~-~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~ 148 (177)
T d1k1ea_ 80 EKETACFDLMKQ-AGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREM 148 (177)
T ss_dssp CHHHHHHHHHHH-HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHH
T ss_pred cHHHHHHHHHHH-hcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHH
Confidence 566666666554 5888999999999999999999999999999 999999999999998776554 4444
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.17 E-value=1e-11 Score=120.87 Aligned_cols=147 Identities=15% Similarity=0.147 Sum_probs=91.2
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----CCceEEeehhh--------------------
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKP----GEDYLILEGKE-------------------- 397 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~----~~~~i~~~g~~-------------------- 397 (668)
.+...+.+.++|++|+++|++++++|||++..+..+.+++++..+ ++..+...+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGI 94 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTCCC----------CEEEECSC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCceecccchhHHHHHHHHHHhh
Confidence 455568899999999999999999999999999999999998432 12111111100
Q ss_pred ----HHHhhhc------Cc------h-h------hhHHHHhhhc----------------------CCcEEEE------e
Q psy11770 398 ----FNRRVRD------NN------G-E------VQQNLLDKVW----------------------PRLRVLA------R 426 (668)
Q Consensus 398 ----~~~~~~~------~~------~-~------~~~~~l~~~~----------------------~~~~v~~------r 426 (668)
+...... .. . . ...+...... ....+.. -
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (243)
T d1wzca1 95 RVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTV 174 (243)
T ss_dssp CHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBCSSSCHHHHHHHTTCEEEECSSSEEE
T ss_pred hHHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcchhhhhhhhHHHHHhhhhcCeEEeecccccch
Confidence 0000000 00 0 0 0000000000 0000110 0
Q ss_pred cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhc
Q psy11770 427 SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIIL 489 (668)
Q Consensus 427 ~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl 489 (668)
.....|...++.++++........++++|||.||++||+.||.||+|| |+.+.+++.+|.+.
T Consensus 175 ~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~-Na~~~~~~~~~~i~ 236 (243)
T d1wzca1 175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSII 236 (243)
T ss_dssp ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTCEEESCHH
T ss_pred hhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeC-CCChHHHhhhhHHH
Confidence 122368877777765532456679999999999999999999999999 99888777666543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.15 E-value=3.9e-11 Score=117.03 Aligned_cols=153 Identities=16% Similarity=0.185 Sum_probs=102.8
Q ss_pred chHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH----------HHhhhcC------------
Q psy11770 348 EVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF----------NRRVRDN------------ 405 (668)
Q Consensus 348 ~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~----------~~~~~~~------------ 405 (668)
+..+.+.++++.|+.++++|||+...+..+.+++++..+ +.++..+|..+ .......
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~-~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEP-DYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCC-SEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCC-ceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhh
Confidence 344556667899999999999999999999999998543 22222233211 0000000
Q ss_pred c------------------------hhhhHH----HHhhhcCCcE--------EEEecCHhhHHHHHHHHHHhhcCCCCC
Q psy11770 406 N------------------------GEVQQN----LLDKVWPRLR--------VLARSSPSDKYTLVKGMIDSKISAGRE 449 (668)
Q Consensus 406 ~------------------------~~~~~~----~l~~~~~~~~--------v~~r~~p~~K~~iv~~l~~~~~~~~~~ 449 (668)
. .....+ .+.+...... +-......+|...++.+.++ ++...+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~-~gi~~~ 179 (244)
T d1s2oa1 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQH-LAMEPS 179 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHH-TTCCGG
T ss_pred cccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHh-ccCChh
Confidence 0 000001 1111111111 11123445899999988766 577788
Q ss_pred EEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcc-------hhcccCCchHHHHHHHH
Q psy11770 450 VVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD-------IILTDDNFSSIVKAVMW 503 (668)
Q Consensus 450 ~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad-------~vl~~~~~~~i~~~l~~ 503 (668)
.|+++|||.||.+||+.||.||+|+ |+.+.+++.|| ++...++.+++.++|+|
T Consensus 180 ~~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 180 QTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp GEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred hEEEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 8999999999999999999999999 99999999998 45556667788888875
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=9.2e-11 Score=112.38 Aligned_cols=129 Identities=17% Similarity=0.246 Sum_probs=93.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++|++.+.|+.|++.|++++++||.....+..+++.+|+... .++. +.-.+.. + ....-
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~--~v~a-n~~~~~~-----~------------G~~~g 141 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFA-NRLKFYF-----N------------GEYAG 141 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEE-ECEEECT-----T------------SCEEE
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc--ceee-eeeeeee-----h------------hcccc
Confidence 3689999999999999999999999999999999999999421 1111 0000000 0 00000
Q ss_pred EEe----cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCC-ccHHHHHhcchhcccCCchHH
Q psy11770 424 LAR----SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGIT-GTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 424 ~~r----~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~-~~~~ak~~ad~vl~~~~~~~i 497 (668)
+-. ..+..|..+++.++.+ .+.+.++++|||.||++|++.||++||++.+ ..+..++.+|+++. +|..+
T Consensus 142 ~~~~~p~~~~~~K~~~v~~~~~~---~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~el 215 (217)
T d1nnla_ 142 FDETQPTAESGGKGKVIKLLKEK---FHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVEL 215 (217)
T ss_dssp ECTTSGGGSTTHHHHHHHHHHHH---HCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGG
T ss_pred ceeeeeeeccchHHHHHHHHHhc---cCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHHh
Confidence 111 3456799999987543 3457899999999999999999999999844 34667788999886 56543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.05 E-value=5.1e-11 Score=112.62 Aligned_cols=134 Identities=21% Similarity=0.235 Sum_probs=98.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.+++.+.++.++..|..+.++||.....+....++.+....-...+..+. .. ...
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------------~~~ 131 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD--GK--------------------LTG 131 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET--TE--------------------EEE
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccc--cc--------------------ccc
Confidence 46788999999999999999999999999999999998887421110000000 00 000
Q ss_pred EEEe--cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHH
Q psy11770 423 VLAR--SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKA 500 (668)
Q Consensus 423 v~~r--~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~ 500 (668)
.... ..+..|...++.+... ++...+.++++|||.||++|++.||+|||| |+.+..++.||+++.++++++|.++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~ 208 (210)
T d1j97a_ 132 DVEGEVLKENAKGEILEKIAKI-EGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKY 208 (210)
T ss_dssp EEECSSCSTTHHHHHHHHHHHH-HTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGG
T ss_pred cccccccccccccchhhhHHHH-hcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHH
Confidence 0111 1233455555554433 578888999999999999999999999999 5899999999999998889988765
Q ss_pred H
Q psy11770 501 V 501 (668)
Q Consensus 501 l 501 (668)
|
T Consensus 209 l 209 (210)
T d1j97a_ 209 I 209 (210)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.05 E-value=2.5e-10 Score=107.52 Aligned_cols=129 Identities=13% Similarity=0.122 Sum_probs=89.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
..++....++.+ +.+.+.+++|+.............++.....+.+..... ......
T Consensus 70 ~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------------~~~~~~ 126 (206)
T d1rkua_ 70 PLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS----------------------DRVVGY 126 (206)
T ss_dssp CCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT----------------------SCEEEE
T ss_pred ccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecc----------------------cccccc
Confidence 455666666655 578999999999999999999999884321111111110 011222
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
....+..+...++. ++...+.|+|+|||.||++||+.||+||||+ +..+..++++|+++.+ +++.+.+.|.+
T Consensus 127 ~~~~~~~~~~~~~~-----~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~~-~~~d~~~~~~~ 198 (206)
T d1rkua_ 127 QLRQKDPKRQSVIA-----FKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVH-TYEDLKREFLK 198 (206)
T ss_dssp ECCSSSHHHHHHHH-----HHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEEC-SHHHHHHHHHH
T ss_pred cccchhhHHHHHHH-----hcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceeec-CHHHHHHHHHH
Confidence 33344444455544 3677899999999999999999999999996 6666777788887754 78888877654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.04 E-value=4e-10 Score=108.20 Aligned_cols=42 Identities=5% Similarity=0.075 Sum_probs=39.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 384 (668)
..+.+.+.++|++|+++|++++++|||+...+..+.+++++.
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 357889999999999999999999999999999999999983
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.93 E-value=9e-10 Score=105.64 Aligned_cols=144 Identities=14% Similarity=0.061 Sum_probs=99.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-CceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG-EDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~-~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+...- .+....+++..... .......
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~--------------~~~~~~~ 140 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID--------------WPHSCKG 140 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE--------------CTTCCCT
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec--------------ccccccc
Confidence 46899999999999999999999999999999999999874210 00001111110000 0000011
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
..+...|..|..+++.+ +..++.|+++||+.||++|++.||+++|++ ...+.+++..--...-++|+.+...+.
T Consensus 141 ~~~~~k~~~~~~~~~~~-----~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~~~d~~~i~~~l~ 214 (226)
T d2feaa1 141 TCSNQCGCCKPSVIHEL-----SEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQDFYEIRKEIE 214 (226)
T ss_dssp TCCSCCSSCHHHHHHHH-----CCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCSSHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHh-----cCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeeecCCHHHHHHHHH
Confidence 23456788888888874 788999999999999999999999999998 555555544322233348999888876
Q ss_pred HHHHH
Q psy11770 503 WGRNV 507 (668)
Q Consensus 503 ~gR~~ 507 (668)
+-...
T Consensus 215 ~~~~~ 219 (226)
T d2feaa1 215 NVKEV 219 (226)
T ss_dssp TSHHH
T ss_pred HHHHH
Confidence 54333
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=3.2e-09 Score=102.14 Aligned_cols=56 Identities=18% Similarity=0.272 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcC----CccCHHHHhhCC-ccEeeCCCccHHHHHhcchhcc
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKAD-VGFAMGITGTDVAKEASDIILT 490 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGD----g~ND~~mlk~A~-vGIam~~~~~~~ak~~ad~vl~ 490 (668)
-+|...++.|. +...+.|+++|| |.||.+||+.|+ .|+||+ |+.+.+|..+|+++.
T Consensus 184 vsKg~al~~L~----~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 184 WDKRYCLDSLD----QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFP 244 (244)
T ss_dssp CSTTHHHHHHT----TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCT
T ss_pred ccHHHHHHHHh----cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcCC
Confidence 37999999874 457889999999 469999999998 699999 999999999999863
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.51 E-value=1.6e-08 Score=96.41 Aligned_cols=62 Identities=13% Similarity=0.296 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.+|...++.+.. .+.++++||+.||.+||+.|+.|++|+ +|.. +.+|++.+. +...+.++++
T Consensus 158 ~~Kg~al~~l~~------~~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~~--~~~ev~~~l~ 219 (229)
T d1u02a_ 158 VNKGSAIRSVRG------ERPAIIAGDDATDEAAFEANDDALTIK-VGEG--ETHAKFHVA--DYIEMRKILK 219 (229)
T ss_dssp CCHHHHHHHHHT------TSCEEEEESSHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEES--SHHHHHHHHH
T ss_pred CCHHHHHHHHhc------cccceeecCCCChHHHHhccCCeEEEE-eCCC--CccCeEEcC--CHHHHHHHHH
Confidence 479999998742 256889999999999999997776665 3432 457888887 4555665553
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=5.9e-07 Score=85.76 Aligned_cols=53 Identities=17% Similarity=0.370 Sum_probs=40.1
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcC----CccCHHHHhhCC-ccEeeCCCccHHHHHhcchh
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKAD-VGFAMGITGTDVAKEASDII 488 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGD----g~ND~~mlk~A~-vGIam~~~~~~~ak~~ad~v 488 (668)
.+|...++.| ++...+.|+++|| |.||.+||+.|+ .|++++ + .+..++.++.+
T Consensus 184 vsKg~al~~l----~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~-~~~~~~~~~~l 241 (243)
T d2amya1 184 WDKRYCLRHV----ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-A-PEDTRRICELL 241 (243)
T ss_dssp CSGGGGGGGT----TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-S-HHHHHHHHHHH
T ss_pred cCHHHHHHHH----hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-C-HHHHHHHHHHH
Confidence 3788888877 3567889999999 789999999998 688876 5 56666666654
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.99 E-value=5.9e-06 Score=78.26 Aligned_cols=126 Identities=13% Similarity=0.118 Sum_probs=83.9
Q ss_pred CCCchHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 345 VRPEVPEAIKKCQRAG-ITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 345 l~~~~~~~I~~l~~aG-I~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+-|++.+.++.|++.| +++.++||.....+..+.+..|+...-+. ++ .+.+.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~-i~-~~~~~------------------------- 144 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF-GA-FADDA------------------------- 144 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC-EE-CTTTC-------------------------
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccc-cc-ccccc-------------------------
Confidence 4689999999999987 89999999999999999999999533221 11 11100
Q ss_pred EEecCHhhHHHH-HHHHHHh-hcCCCCCEEEEEcCCccCHHHHhhCC---ccEeeCCCccHH-HHHhcchhcccCCchHH
Q psy11770 424 LARSSPSDKYTL-VKGMIDS-KISAGREVVAVTGDGTNDGPALKKAD---VGFAMGITGTDV-AKEASDIILTDDNFSSI 497 (668)
Q Consensus 424 ~~r~~p~~K~~i-v~~l~~~-~~~~~~~~v~~iGDg~ND~~mlk~A~---vGIam~~~~~~~-ak~~ad~vl~~~~~~~i 497 (668)
..+..+..+ .+.+.+. ..+..++.++||||+.+|+.|-+.|| |+|+.|....+. .+..+|+++. ++..+
T Consensus 145 ---~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el 219 (228)
T d2hcfa1 145 ---LDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAET 219 (228)
T ss_dssp ---SSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCH
T ss_pred ---ccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHH
Confidence 011111111 1111111 12456789999999999999999999 555556333333 3335789887 78888
Q ss_pred HHHHH
Q psy11770 498 VKAVM 502 (668)
Q Consensus 498 ~~~l~ 502 (668)
.++|.
T Consensus 220 ~~~l~ 224 (228)
T d2hcfa1 220 DEVLA 224 (228)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.88 E-value=7.1e-06 Score=76.51 Aligned_cols=122 Identities=11% Similarity=0.135 Sum_probs=87.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.++..| ++.++|+.....+..+.+++|+...-+. .+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~--------------------------------v~ 130 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDG--------------------------------IY 130 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSE--------------------------------EE
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccc--------------------------------cc
Confidence 46789999999998775 8999999999999999999998532211 12
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc---cEeeCCCccHHHHH-hcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDVAKE-ASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v---GIam~~~~~~~ak~-~ad~vl~~~~~~~i~~ 499 (668)
.+...+..|..+++..+++ ++.+++.+++|||+.+|+.+-+.||+ +|.-|....+...+ .+|+++. ++..+.+
T Consensus 131 ~~~~~~~~~p~~~~~~~~~-~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~ 207 (210)
T d2ah5a1 131 GSSPEAPHKADVIHQALQT-HQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp EECSSCCSHHHHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred cccccccccccccchhhhh-hhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 2333344455555555444 68899999999999999999999996 45444333333333 4788877 6777665
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
.+
T Consensus 208 ~l 209 (210)
T d2ah5a1 208 YF 209 (210)
T ss_dssp HT
T ss_pred Hh
Confidence 43
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.79 E-value=1e-05 Score=75.85 Aligned_cols=121 Identities=13% Similarity=0.209 Sum_probs=79.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|+++|+++.++||.+...+..+.+.+|+..--+.+ +.+++..
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i--~~~~~~~------------------------ 141 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--ASAEKLP------------------------ 141 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE--EECTTSS------------------------
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccccccc--ccccccc------------------------
Confidence 34699999999999999999999999999999999999994322211 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe-eC--CCccHHHHHhcchhcccCCchHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MG--ITGTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa-m~--~~~~~~ak~~ad~vl~~~~~~~i 497 (668)
.++..|+-=..+++. ++..++.+++|||+.+|+.|-+.||+... +. ....+.....||+++. ++..+
T Consensus 142 ~~Kp~~~~~~~~~~~-----l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~--~l~el 211 (218)
T d1te2a_ 142 YSKPHPQVYLDCAAK-----LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTEL 211 (218)
T ss_dssp CCTTSTHHHHHHHHH-----HTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGC
T ss_pred cchhhHHHHHHHHHH-----cCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEEC--ChhhC
Confidence 011122222233333 47888999999999999999999996432 22 1112222356787776 55543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.75 E-value=6.5e-06 Score=77.40 Aligned_cols=125 Identities=23% Similarity=0.334 Sum_probs=83.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+...-+.++ .+.+..
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~--~~~~~~------------------------ 148 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEML--GGQSLP------------------------ 148 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE--CTTTSS------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccc--cccccc------------------------
Confidence 357999999999999999999999999999999999999853222111 000000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc---cEeeCCCc-cHHHHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITG-TDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v---GIam~~~~-~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
.....|+--..+.+. ++...+.+++|||+.+|+.+-+.||+ +|..|.+. .+.....+|+++. ++..+.+
T Consensus 149 ~~kp~p~~~~~~~~~-----~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ 221 (224)
T d2hsza1 149 EIKPHPAPFYYLCGK-----FGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 221 (224)
T ss_dssp SCTTSSHHHHHHHHH-----HTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred cccccchhhHHHHHH-----hhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHH
Confidence 011122222222222 47888999999999999999999996 33333121 2233445788877 6777665
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
+|
T Consensus 222 ii 223 (224)
T d2hsza1 222 IT 223 (224)
T ss_dssp GT
T ss_pred hh
Confidence 43
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.65 E-value=3.6e-05 Score=74.03 Aligned_cols=127 Identities=16% Similarity=0.217 Sum_probs=84.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|++.|+++.++||.+...+..+.+.+|+..-..+. ++.+.+..
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~-~~~~d~~~------------------------ 153 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF-LVTPDDVP------------------------ 153 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC-CBCGGGSS------------------------
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccc-cccccccc------------------------
Confidence 47899999999999999999999999999999999999985322111 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCC-CCCEEEEEcCCccCHHHHhhCCc---cEeeCCCc---c-HH---------------
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISA-GREVVAVTGDGTNDGPALKKADV---GFAMGITG---T-DV--------------- 480 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~-~~~~v~~iGDg~ND~~mlk~A~v---GIam~~~~---~-~~--------------- 480 (668)
..+..|+.=....+. ++. +.+.|+||||+.+|+.+-+.||+ ||.-|.+. + +.
T Consensus 154 ~~KP~p~~~~~~~~~-----l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (257)
T d1swva_ 154 AGRPYPWMCYKNAME-----LGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEV 228 (257)
T ss_dssp CCTTSSHHHHHHHHH-----HTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHH
T ss_pred ccccChHHHHHHHHH-----hCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHH
Confidence 112233333333333 355 45889999999999999999995 44444110 0 00
Q ss_pred -----HHHhcchhcccCCchHHHHHHH
Q psy11770 481 -----AKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 481 -----ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.+.-||+++. ++..+..+|.
T Consensus 229 ~~~~l~~~gad~vi~--~l~eL~~ii~ 253 (257)
T d1swva_ 229 VRNRFVENGAHFTIE--TMQELESVME 253 (257)
T ss_dssp HHHHHHHTTCSEEES--SGGGHHHHHH
T ss_pred HHHHHHhCCCCEEEC--CHHHHHHHHH
Confidence 1112899988 7778877774
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.63 E-value=6.3e-05 Score=73.45 Aligned_cols=140 Identities=11% Similarity=0.121 Sum_probs=83.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++|+|+.+.++.|++.|+++.++||--...+..+++++|+..++-.++ .+.-++... ...+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~-sN~l~f~~~------------------~~~~ 195 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVV-SNFMDFDEN------------------GVLK 195 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEE-EECEEECTT------------------SBEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEE-eeEEEEeCC------------------eeEe
Confidence 489999999999999999999999999999999999999865432222 111111100 0000
Q ss_pred -EE--ecCHhhHHHHHHHHHHh-hcCCCCCEEEEEcCCccCHHHHhhC---CccEeeCC-Ccc-----HHHHHhcchhcc
Q psy11770 424 -LA--RSSPSDKYTLVKGMIDS-KISAGREVVAVTGDGTNDGPALKKA---DVGFAMGI-TGT-----DVAKEASDIILT 490 (668)
Q Consensus 424 -~~--r~~p~~K~~iv~~l~~~-~~~~~~~~v~~iGDg~ND~~mlk~A---~vGIam~~-~~~-----~~ak~~ad~vl~ 490 (668)
+- ......|...+.....+ ........|+++|||.||+.|.+.+ +.++++|- +.. +.-.++-|+|+.
T Consensus 196 ~~~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~ 275 (291)
T d2bdua1 196 GFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 275 (291)
T ss_dssp EECSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEE
T ss_pred eccCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEe
Confidence 00 01222343332211110 1234567899999999999999853 34444432 221 223467888876
Q ss_pred cC-CchHHHHHHH
Q psy11770 491 DD-NFSSIVKAVM 502 (668)
Q Consensus 491 ~~-~~~~i~~~l~ 502 (668)
++ +++-+..++.
T Consensus 276 ~d~~~~v~~~il~ 288 (291)
T d2bdua1 276 KEESLEVVNSILQ 288 (291)
T ss_dssp TCCBCHHHHHHHH
T ss_pred cCCChhHHHHHHH
Confidence 44 4555555443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.58 E-value=5.6e-05 Score=71.33 Aligned_cols=125 Identities=16% Similarity=0.162 Sum_probs=85.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|+ +|++++++|+........+.+.+|+...-+.+ +.+.+..
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i--~~s~~~~------------------------ 152 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSI--TTSEEAG------------------------ 152 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEE--EEHHHHT------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccc--ccccccc------------------------
Confidence 46799999999997 58999999999999999999999984322211 1111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCCccEe-e--CCCccHHHHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVGFA-M--GITGTDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~vGIa-m--~~~~~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
...|+ .++.+...++ ++..++.+++|||. .+|+.+-+.||+... + + .........+|+++. ++..+.+
T Consensus 153 --~~KP~--~~~~~~~~~~-l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~-~~~~~~~~~~d~~i~--~l~el~~ 224 (230)
T d1x42a1 153 --FFKPH--PRIFELALKK-AGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIK 224 (230)
T ss_dssp --BCTTS--HHHHHHHHHH-HTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTT-SCCGGGGGGSSEEES--STTHHHH
T ss_pred --ccchh--hHHHHHHHhh-hcccccccceeecCcHhHHHHHHHcCCEEEEECCC-CCCcccccCCCEEEC--CHHHHHH
Confidence 01222 2333333332 57788899999998 689999999996432 2 2 233344567899888 7888888
Q ss_pred HHHH
Q psy11770 500 AVMW 503 (668)
Q Consensus 500 ~l~~ 503 (668)
+|++
T Consensus 225 ~l~~ 228 (230)
T d1x42a1 225 IVDE 228 (230)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=0.00018 Score=65.33 Aligned_cols=57 Identities=25% Similarity=0.313 Sum_probs=44.2
Q ss_pred cCCCCCEEEEEcCCccCHHHHhhCCcc--Eee--CCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 444 ISAGREVVAVTGDGTNDGPALKKADVG--FAM--GITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 444 ~~~~~~~v~~iGDg~ND~~mlk~A~vG--Iam--~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
++...+.++||||..+|+.+-+.|+++ +.+ |....+.....||+++. ++..+.++|+
T Consensus 121 ~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~dl~~~ik 181 (182)
T d2gmwa1 121 LHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLADLPQAIK 181 (182)
T ss_dssp HTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGGHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CHHHHHHHhc
Confidence 478888999999999999999999985 333 31223556677999988 7888888775
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.33 E-value=0.00019 Score=63.95 Aligned_cols=92 Identities=14% Similarity=0.109 Sum_probs=65.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH-HHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNI-NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~-~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.+.++.|+++|+++.++|+.+. ..+....+..++..... .
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~---------------------------------~ 92 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI---------------------------------Q 92 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS---------------------------------E
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce---------------------------------e
Confidence 5789999999999999999999997654 45666667666631110 1
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
+.....| |....+.+.++ ++...+.+++|||...|+.+-+.||+-.
T Consensus 93 ~~~~~kp--~~~~~~~~~~~-~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 93 REIYPGS--KVTHFERLHHK-TGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp EEESSSC--HHHHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred eecccCC--ChHHHHHHHHH-hCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 2333333 33334444333 5889999999999999999999999733
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00021 Score=67.53 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=77.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.|++.+.+++|+++|+++.++|+............+|+..-......... . ..
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d-~------------------------~~ 181 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFD-T------------------------KI 181 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEEC-G------------------------GG
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeec-c------------------------cc
Confidence 4689999999999999999999999999999999998987422111100000 0 00
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEee----CCCccHHHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM----GITGTDVAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam----~~~~~~~ak~~ad~vl~ 490 (668)
..+..|+-=....+. ++..++.++||||..+|+.+-++||+.... |..........++.++.
T Consensus 182 ~~KP~p~~~~~~~~~-----~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 182 GHKVESESYRKIADS-----IGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp CCTTCHHHHHHHHHH-----HTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred ccCCCcHHHHHHHHH-----hCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 012222222222222 478889999999999999999999975543 32223334455566665
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.25 E-value=0.00012 Score=67.56 Aligned_cols=118 Identities=14% Similarity=0.087 Sum_probs=74.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.|++.++++.|++.|+++.++|+... .+..+.+++|+...-+ .+ +.+.+.
T Consensus 83 ~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~-~i-~~s~~~-------------------------- 133 (204)
T d2go7a1 83 LMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT-EI-LTSQSG-------------------------- 133 (204)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEE-EE-ECGGGC--------------------------
T ss_pred ccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccc-cc-cccccc--------------------------
Confidence 579999999999999999999998765 5667888999842111 01 110000
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE-eeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI-am~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
. .+..+..+.+.+.++ ++.+++.++||||+.+|+.+-+.||+.. ++. .+. ..+|+.+. ++..+.+++
T Consensus 134 ~--~~Kp~~~~~~~~~~~-~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~----~~~~~~~~--~~~dl~~l~ 201 (204)
T d2go7a1 134 F--VRKPSPEAATYLLDK-YQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST----YEGNHRIQ--ALADISRIF 201 (204)
T ss_dssp C--CCTTSSHHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS----CTTEEECS--STTHHHHHT
T ss_pred c--ccchhHHHHHHHHHH-hCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCC----CCcCeecC--CHHHHHHHh
Confidence 0 111222333333332 4788899999999999999999999743 344 332 12444444 455555443
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=97.18 E-value=9.9e-05 Score=70.85 Aligned_cols=36 Identities=14% Similarity=0.285 Sum_probs=30.7
Q ss_pred CCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy11770 346 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC 381 (668)
Q Consensus 346 ~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~ 381 (668)
-+++.++|+.|+++|++++++|++...+...+++++
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 478999999999999999999988877777776654
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.14 E-value=4.6e-05 Score=70.67 Aligned_cols=119 Identities=12% Similarity=0.194 Sum_probs=77.3
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.|++.+.++.|++ ++++.++|+.....+..+.+++|+...-+. +..+.+.. .
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~--i~~~~~~~------------------------~ 135 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAV--TISADDTP------------------------K 135 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEE--EECGGGSS------------------------C
T ss_pred cccchhhhhhhhcc-cccccccccccccccccccccccccccccc--cccccccc------------------------c
Confidence 56899999999975 799999999999999999999998431110 11111000 0
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEee---CCCccHHHHHhcchhcccCCchHHH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM---GITGTDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam---~~~~~~~ak~~ad~vl~~~~~~~i~ 498 (668)
....|+ +++...++ ++..++.++||||+.+|+.+-+.||+.... | ..+....+.+|+++. ++..+.
T Consensus 136 ~KP~p~----~~~~~~~~-~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 136 RKPDPL----PLLTALEK-VNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp CTTSSH----HHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGG
T ss_pred chhhhh----hhcccccc-eeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHH
Confidence 111233 33333332 477888999999999999999999976542 3 222333355677764 455443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.94 E-value=0.00047 Score=65.78 Aligned_cols=45 Identities=13% Similarity=0.245 Sum_probs=33.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTG---DNINTARSIATKCGIVKP 386 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TG---d~~~ta~~ia~~~gi~~~ 386 (668)
.+++=+++.++|+.|+++|++++++|+ +.+......-+++|+..+
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 344447899999999999999999984 555555555667887543
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.94 E-value=0.00061 Score=64.46 Aligned_cols=126 Identities=11% Similarity=0.122 Sum_probs=83.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.|++.++++.|+ .|++++++|+..........+++|+...-+.+ . .+.+..
T Consensus 109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i-~-~s~~~~------------------------ 161 (247)
T d2gfha1 109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAI-V-IGGEQK------------------------ 161 (247)
T ss_dssp CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE-E-EGGGSS------------------------
T ss_pred ccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhcccccccccc-c-cccccc------------------------
Confidence 36799999999998 58999999999999999999999985332211 1 111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCcc-EeeC-CCc--cHHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVG-FAMG-ITG--TDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vG-Iam~-~~~--~~~ak~~ad~vl~~~~~~~i~ 498 (668)
..+.+| .+.+.+.++ ++..++.+++|||.. +|+.+-+.||+. +..- ..+ .......+|+++. ++..+.
T Consensus 162 ~~KP~p----~~~~~~~~~-~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~ 234 (247)
T d2gfha1 162 EEKPAP----SIFYHCCDL-LGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELP 234 (247)
T ss_dssp SCTTCH----HHHHHHHHH-HTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHH
T ss_pred cchhhh----hhHHHHHHH-hhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHH
Confidence 011122 233333332 477788899999995 899999999986 4321 111 1112244688877 688888
Q ss_pred HHHHH
Q psy11770 499 KAVMW 503 (668)
Q Consensus 499 ~~l~~ 503 (668)
++|++
T Consensus 235 ~ll~~ 239 (247)
T d2gfha1 235 ALLQS 239 (247)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.89 E-value=0.00023 Score=61.99 Aligned_cols=100 Identities=18% Similarity=0.165 Sum_probs=59.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhh--cC
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKV--WP 419 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~--~~ 419 (668)
++++.|++.+.++.|+++|++++++||++......+.+.++. ........ ..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~--------------------------~~~~~~~~~~~~ 87 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM--------------------------TRKWVEDIAGVP 87 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH--------------------------HHHHHHHTTCCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHH--------------------------HhhhhhhcCCCc
Confidence 578899999999999999999999999985322111111110 00000000 00
Q ss_pred CcEEEEe------cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 420 RLRVLAR------SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 420 ~~~v~~r------~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
....+.+ ..+.-|..+.+.+. ....++++++||...|+.|.+.+|+-.
T Consensus 88 ~~~~~~~~~~~~~~d~~~k~~~l~~~~----~~~~~i~~~igD~~~dv~a~~~~Gi~~ 141 (149)
T d1ltqa1 88 LVMQCQREQGDTRKDDVVKEEIFWKHI----APHFDVKLAIDDRTQVVEMWRRIGVEC 141 (149)
T ss_dssp CSEEEECCTTCCSCHHHHHHHHHHHHT----TTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred EEEeecccccccCCchHHHHHHHHHhc----cCCCceEEEEcCCHHHHHHHHHCCCcE
Confidence 1111221 12345666655542 234556788999999999999999653
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.86 E-value=0.0015 Score=62.38 Aligned_cols=56 Identities=27% Similarity=0.379 Sum_probs=40.1
Q ss_pred cCCCCCEEEEEcCCc-cCHHHHhhCCc-cEee--CCCccHHHHHh---cchhcccCCchHHHHHH
Q psy11770 444 ISAGREVVAVTGDGT-NDGPALKKADV-GFAM--GITGTDVAKEA---SDIILTDDNFSSIVKAV 501 (668)
Q Consensus 444 ~~~~~~~v~~iGDg~-ND~~mlk~A~v-GIam--~~~~~~~ak~~---ad~vl~~~~~~~i~~~l 501 (668)
++...+.++||||+. +|+.+-+.||+ +|.+ |.+..+....+ +|+++. ++..+.++|
T Consensus 198 l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 198 FGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp HTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred hccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 578899999999995 69999999995 4444 32222333322 488888 788887776
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.70 E-value=0.00098 Score=60.24 Aligned_cols=109 Identities=16% Similarity=0.064 Sum_probs=69.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.+... ..+.+++|+...-+. ++.+.+..
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~fd~--i~~~~~~~------------------------ 131 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAAYFTE--VVTSSSGF------------------------ 131 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGGGEEE--EECGGGCC------------------------
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhcccccccc--cccccccc------------------------
Confidence 467999999999999999999999976654 457788888421110 11111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcch
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI 487 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~ 487 (668)
.....|+ +.+...++ ++. +.+++|||..+|+.+-+.||+-...= ++.+..++..|+
T Consensus 132 ~~KP~p~----~~~~~~~~-~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d~ 187 (187)
T d2fi1a1 132 KRKPNPE----SMLYLREK-YQI--SSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLDI 187 (187)
T ss_dssp CCTTSCH----HHHHHHHH-TTC--SSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHTC
T ss_pred ccCCCHH----HHHHHHHH-cCC--CCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcCC
Confidence 0111222 23333222 343 45899999999999999999875433 566666666553
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.23 E-value=0.0042 Score=57.24 Aligned_cols=125 Identities=10% Similarity=0.148 Sum_probs=79.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.+++.+.++.|+. +..++|+.....+..+.+++|+...-...+. .+.....
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~-~~~~~~~----------------------- 137 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIY-SAKDLGA----------------------- 137 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEE-EHHHHCT-----------------------
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeec-ccccccc-----------------------
Confidence 467888888887754 5578999999999999999999643332221 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc-EeeCCCcc-------HHHH-HhcchhcccCCc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGT-------DVAK-EASDIILTDDNF 494 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG-Iam~~~~~-------~~ak-~~ad~vl~~~~~ 494 (668)
.+..|+. .+.....++ ++..++.+++|||+.+|+.+-+.||+- |++. .+. +... .-+|+++. ++
T Consensus 138 -~~~KP~~--~~~~~~~~~-l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~--~l 210 (222)
T d2fdra1 138 -DRVKPKP--DIFLHGAAQ-FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RM 210 (222)
T ss_dssp -TCCTTSS--HHHHHHHHH-HTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CG
T ss_pred -cccccCH--HHHHHHHHh-hCCCCceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEEC--CH
Confidence 0122322 222222222 578889999999999999999999953 3333 221 1222 34899988 78
Q ss_pred hHHHHHHH
Q psy11770 495 SSIVKAVM 502 (668)
Q Consensus 495 ~~i~~~l~ 502 (668)
..+..+|.
T Consensus 211 ~eL~~ll~ 218 (222)
T d2fdra1 211 QDLPAVIA 218 (222)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHHH
Confidence 88776664
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.21 E-value=0.0024 Score=58.78 Aligned_cols=123 Identities=10% Similarity=0.174 Sum_probs=81.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.+++.+.++.+++.|+++.++|+-.........+..++...-+.++. +.+..
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~--s~~~~------------------------ 146 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLS--VDPVQ------------------------ 146 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE--SGGGT------------------------
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceee--eeeee------------------------
Confidence 3568999999999999999999999999999999988888543222111 11110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe-eC--CCccHHHHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MG--ITGTDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa-m~--~~~~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
..+..|+-=..+.+. ++..++.+++|||..+|+.+-+.||+-.+ +. ....+.....+|+++. ++..+.+
T Consensus 147 ~~KP~p~~~~~~~~~-----~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~ 218 (220)
T d1zrna_ 147 VYKPDNRVYELAEQA-----LGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVE 218 (220)
T ss_dssp CCTTSHHHHHHHHHH-----HTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHT
T ss_pred ccccHHHHHHHHHHH-----hCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHh
Confidence 011222222222332 47888999999999999999999997654 32 1222223345788776 5666654
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=96.18 E-value=0.0028 Score=60.27 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=28.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK 380 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~ 380 (668)
+.+-|++.++|+.|+++|++++++|+....+...+++.
T Consensus 17 ~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~ 54 (253)
T d1wvia_ 17 KDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEM 54 (253)
T ss_dssp TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 33448899999999999999999998655554444443
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=95.94 E-value=0.044 Score=46.19 Aligned_cols=106 Identities=17% Similarity=0.227 Sum_probs=66.2
Q ss_pred cChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEeeCCeEEEEEcCchHHHHhhcccccccCCccc
Q psy11770 193 GNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLE 272 (668)
Q Consensus 193 g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 272 (668)
.+|...|+++++++.+...... ....-....||+...+...+.+ +++ .+..|++..+...+.. .+ .
T Consensus 30 eHPlakAIv~~Ak~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~--~g~--~v~~G~~~~~~~~~~~----~g--~ 95 (136)
T d2a29a1 30 ETPEGRSIVILAKQRFNLRERD----VQSLHATFVPFTAQSRMSGINI--DNR--MIRKGSVDAIRRHVEA----NG--G 95 (136)
T ss_dssp CSHHHHHHHHHHHHHHCCCCCC----TTTTTCEEEEEETTTTEEEEEE--TTE--EEEEECHHHHHHHHHH----HT--C
T ss_pred CchHHHHHHHHHHHhcCCCccc----cccccccccccccccceEEEEE--CCE--EEEecHHHHHHHHHHH----cC--C
Confidence 3699999999998754321110 0111123457776665444432 333 4567999877655431 11 1
Q ss_pred cCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCC
Q psy11770 273 KFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVR 346 (668)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~ 346 (668)
.++++ +.+..+.++.+|.+++.+|. |-+++|++++.|+++
T Consensus 96 ~~~~~-----~~~~~~~~~~~G~Tvv~Va~-----------------------------d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 96 HFPTD-----VDQKVDQVARQGATPLVVVE-----------------------------GSRVLGVIALKDIVK 135 (136)
T ss_dssp CCCHH-----HHHHHHHHHHTTSEEEEEEE-----------------------------TTEEEEEEEEEESSC
T ss_pred CCcHH-----HHHHHHHHHHCCCeEEEEEE-----------------------------CCEEEEEEEEEeecC
Confidence 12222 34667889999999999984 348999999999986
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.94 E-value=0.0037 Score=56.83 Aligned_cols=90 Identities=20% Similarity=0.295 Sum_probs=62.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNI----NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~----~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
+.+++.+.++.+++.|++|+.+|||.. .|+.++.+.+|+...+...+.+.+.+
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------- 143 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------- 143 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC-----------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC-----------------------
Confidence 457999999999999999999999864 36667777789853332222221111
Q ss_pred cEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc-cEe
Q psy11770 421 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFA 472 (668)
Q Consensus 421 ~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v-GIa 472 (668)
.....|...++. ..+++++||..+|..+-++|++ +|-
T Consensus 144 ------~~K~~rr~~Ik~---------y~I~l~~GD~l~Df~aA~eagi~~iR 181 (209)
T d2b82a1 144 ------PGQNTKSQWLQD---------KNIRIFYGDSDNDITAARDVGARGIR 181 (209)
T ss_dssp ------TTCCCSHHHHHH---------TTEEEEEESSHHHHHHHHHTTCEEEE
T ss_pred ------CCchHHHHHHHH---------cCeEEEecCCHHHHhHHHHcCCCceE
Confidence 112345555543 3589999999999999999984 443
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.91 E-value=0.0025 Score=58.86 Aligned_cols=99 Identities=14% Similarity=0.184 Sum_probs=66.7
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.|++.+.++.|++.|+++.++|+... +....+..|+...-.. ++.+.+.
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~--i~~~~~~------------------------ 141 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDA--IADPAEV------------------------ 141 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSE--ECCTTTS------------------------
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccc--ccccccc------------------------
Confidence 45689999999999999999999999754 5677888888532111 1111110
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc-cEeeC
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAMG 474 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v-GIam~ 474 (668)
....|+- .+.+...++ ++..++.++||||+.+|+.+-+.||+ .|+++
T Consensus 142 --~~~KP~~--~~~~~~l~~-~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~ 189 (221)
T d1o08a_ 142 --AASKPAP--DIFIAAAHA-VGVAPSESIGLEDSQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp --SSCTTST--HHHHHHHHH-TTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred --cccccCh--HHHHHHHHH-cCCCCceEEEEecCHHHHHHHHHcCCEEEEEC
Confidence 0112221 223333222 57888999999999999999999996 44444
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.78 E-value=0.0071 Score=55.54 Aligned_cols=30 Identities=20% Similarity=0.135 Sum_probs=26.1
Q ss_pred cCCCCCEEEEEcCCccCHHHHhhCCc-cEee
Q psy11770 444 ISAGREVVAVTGDGTNDGPALKKADV-GFAM 473 (668)
Q Consensus 444 ~~~~~~~v~~iGDg~ND~~mlk~A~v-GIam 473 (668)
++.+.+.+.||||..+|+.+-+.||+ ++.+
T Consensus 142 ~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v 172 (209)
T d2o2xa1 142 LALDLQRSLIVGDKLADMQAGKRAGLAQGWL 172 (209)
T ss_dssp HTCCGGGCEEEESSHHHHHHHHHTTCSEEEE
T ss_pred hCCCccceEEeCCCHHHHHHHHHCCCcEEEE
Confidence 57888999999999999999999998 4444
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.53 E-value=0.015 Score=52.95 Aligned_cols=148 Identities=19% Similarity=0.277 Sum_probs=95.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh----------------hhcCch
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR----------------VRDNNG 407 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~----------------~~~~~~ 407 (668)
.+-|++.++++.+++. ....++|---..-+.++|..+|+. .. ...+.-+++.. +.+.+.
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp---~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ 155 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR---GE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSG 155 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC---SE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC---ce-eecccccccccCCChHHHHHHHHHhhhccCccH
Confidence 3569999999999876 677788877888899999999993 22 22222111110 001111
Q ss_pred hhhHHHHhh---------hcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC--ccEeeCCC
Q psy11770 408 EVQQNLLDK---------VWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD--VGFAMGIT 476 (668)
Q Consensus 408 ~~~~~~l~~---------~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~--vGIam~~~ 476 (668)
+-..+.+++ ++..++.. -...|..+++..... .... ..+++||+..|+.||+.|. =|+|++-|
T Consensus 156 eel~e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~-~~~~--~~~~VGDSITDve~Lr~~r~~gGlaIsFN 229 (308)
T d1y8aa1 156 EELFRKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCES-KGID--FPVVVGDSISDYKMFEAARGLGGVAIAFN 229 (308)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHH-HTCS--SCEEEECSGGGHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhccc-ccCC--cceeccCccccHHHHHHHhcCCCeeEEec
Confidence 111111121 22222221 335677777766543 2333 3488999999999999984 37887788
Q ss_pred ccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 477 GTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 477 ~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
|.+-+...||+.+.+.+-..+..++.
T Consensus 230 GN~Yal~eA~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 230 GNEYALKHADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp CCHHHHTTCSEEEECSSTHHHHHHHH
T ss_pred CccccccccceEEeccchhHHHHHHH
Confidence 99999999999998888777776664
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.40 E-value=0.0086 Score=54.88 Aligned_cols=108 Identities=12% Similarity=0.136 Sum_probs=67.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDN----INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~----~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
.+.+++.+.++.|+++|+++.++|+.. ...........|+...-+. ++.+.+..
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~--i~~s~~~~-------------------- 154 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDF--LIESCQVG-------------------- 154 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSE--EEEHHHHS--------------------
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhce--eeehhhcc--------------------
Confidence 357899999999999999999999633 2233444455555321111 11111110
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc-cEeeCCCccHHHHH
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAMGITGTDVAKE 483 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v-GIam~~~~~~~ak~ 483 (668)
.....|+--....+. ++..++.++||||...|+.+-+.||+ +|.+. ++.+...+
T Consensus 155 ----~~KP~p~~~~~~~~~-----~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~~~e 209 (222)
T d1cr6a1 155 ----MIKPEPQIYNFLLDT-----LKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTASALRE 209 (222)
T ss_dssp ----CCTTCHHHHHHHHHH-----HTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHHHHH
T ss_pred ----CCCCChHHHHHHHHH-----hCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-CcchHHHH
Confidence 012234433334443 47888999999999999999999996 55554 55544443
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.14 E-value=0.0056 Score=53.73 Aligned_cols=28 Identities=18% Similarity=0.114 Sum_probs=23.8
Q ss_pred cCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 444 ISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 444 ~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
++...+.++||||...|..|-+.||+--
T Consensus 117 ~~id~~~~~~IGD~~~Di~aA~~aG~~~ 144 (161)
T d2fpwa1 117 QAMDRANSYVIGDRATDIQLAENMGING 144 (161)
T ss_dssp --CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred cCCChhcEEEECCCHHHHHHHHHcCCeE
Confidence 5788899999999999999999999754
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=94.17 E-value=0.088 Score=48.46 Aligned_cols=94 Identities=6% Similarity=0.085 Sum_probs=64.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+++++|+ |+.+.++|+.+...+....+..|+...-+. ++.+.+..
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~--v~~s~~~~------------------------ 144 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDA--VISVDAKR------------------------ 144 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGGT------------------------
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccc--cccccccc------------------------
Confidence 46788999999885 788999999999999999899988543222 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG 470 (668)
+..|+- ++.+...++ ++..++.+++|||+.+|+.+-+.||+.
T Consensus 145 --~~KP~p--~~f~~a~~~-lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 145 --VFKPHP--DSYALVEEV-LGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp --CCTTSH--HHHHHHHHH-HCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred --ccCccH--HHHHHHHHH-hCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 112321 222222222 578889999999999999999999954
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.29 E-value=0.044 Score=49.56 Aligned_cols=99 Identities=12% Similarity=0.179 Sum_probs=59.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHH----HHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSI----ATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~i----a~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
+.+++.+.++.|++.|++++++|+......... ....++...-+ . ++.+.+..
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd-~-i~~s~~~~--------------------- 156 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFD-F-LIESCQVG--------------------- 156 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSS-E-EEEHHHHT---------------------
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhcc-E-EEeccccc---------------------
Confidence 578999999999999999999997654332222 22223211111 1 11111110
Q ss_pred cEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc-cEeeC
Q psy11770 421 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAMG 474 (668)
Q Consensus 421 ~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v-GIam~ 474 (668)
...|+ .++.+...+. ++..++.+++|||...|+.+-+.+|+ +|.+.
T Consensus 157 -----~~KP~--~~~~~~~~~~-~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 157 -----MVKPE--PQIYKFLLDT-LKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp -----CCTTC--HHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred -----cchhH--HHHHHHHhhh-cccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 01222 2223332222 47788899999999999999999998 55555
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=91.05 E-value=0.014 Score=51.78 Aligned_cols=99 Identities=10% Similarity=0.174 Sum_probs=59.6
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc-CCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC-GIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~-gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+.+++.+.+..++..|+++.++|+-+...+.....+. |+...-+ .+ +.+.+.
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd-~v-~~s~~~------------------------- 137 (197)
T d2b0ca1 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAAD-HI-YLSQDL------------------------- 137 (197)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCS-EE-EEHHHH-------------------------
T ss_pred cCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhcc-ce-eecccc-------------------------
Confidence 5789999999999999999999986654432222211 1110000 00 000000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc-cEeeC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAMG 474 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v-GIam~ 474 (668)
....|. .++.+...++ ++..++.+++|||..+|+.+-+.||+ +|.+.
T Consensus 138 -~~~Kp~--~~~~~~~~~~-~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 138 -GMRKPE--ARIYQHVLQA-EGFSPSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp -TCCTTC--HHHHHHHHHH-HTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred -cccccc--hHHHHHHHHh-cCCCCCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 001222 2333333333 47788999999999999999999997 55555
|