Psyllid ID: psy11783

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MAPSKTVALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKIKPETCV
Secondary Structure (PSIPRED)
cccccccEEEEcccccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccHHHHHHHHHHHHHccccccEEEHHEEcccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHEEEcccccccccccccccHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEcEEEccccEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccEEEEcccccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHccccccccc
Coil and Loop (DISEMBL)
mapsktvalfsnctcmsgmwgngtilpdplattaslgpcendcvsVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGlfgnvpcpivYGAVVDSACLVWEsvcgekgacnlydtdvfRVFYHGTTGFILLLAFFVDTIVWYKagsinfadeetntpeddEMQAMTEkikpetcv
Flexible Loop (DISEMBL)
MAPSKTVALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSinfadeetntpedDEMQAMtekikpetcv
Low Complexity Region (SEG)
MAPSKTVALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKIKPETCV
Disordered region (IsUnstruct)
******VALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINF**************************
Disordered Region (DISOPRED)
****KTV*LFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYK********************************
Disordered Region (DISEMBL)
MAPSKTVALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKIKPETCV
Disordered Region (DISPRO)
****KTVALFSNCTCMSGMWGNGT***********LGPCENDCVSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSI****************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPSKTVALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKIKPETCV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	189	2.2.26 [Sep-21-2011]
Q9ERB5	715	Solute carrier organic an	no	N/A	0.915	0.241	0.288	3e-19
Q9EPZ7	716	Solute carrier organic an	yes	N/A	0.915	0.241	0.288	7e-19
O35913	661	Solute carrier organic an	no	N/A	0.857	0.245	0.299	9e-18
P46720	670	Solute carrier organic an	no	N/A	0.714	0.201	0.326	2e-17
P46721	670	Solute carrier organic an	yes	N/A	0.634	0.179	0.350	2e-17
Q99J94	670	Solute carrier organic an	no	N/A	0.719	0.202	0.324	2e-17
Q9GMU6	602	Solute carrier organic an	N/A	N/A	0.915	0.287	0.271	5e-17
O88397	670	Solute carrier organic an	no	N/A	0.640	0.180	0.325	1e-16
Q9QXZ6	670	Solute carrier organic an	no	N/A	0.878	0.247	0.307	2e-16
P70502	670	Solute carrier organic an	no	N/A	0.804	0.226	0.302	3e-16

>sp|Q9ERB5|SO1C1_MOUSE Solute carrier organic anion transporter family member 1C1 OS=Mus musculus GN=Slco1c1 PE=1 SV=1

 Score = 94.7 bits (234), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 9   LFSNCTCMSGMWGNGTILPDPLATTASLGPCEND--CVSVKWYIILFSFFV-FIHSTSEV 65
           +FSNCTC+      G   P     +  +G C+ D  C  +  Y ++ S    +  S   +
Sbjct: 520 IFSNCTCV------GFAAPKSGNWSGMMGRCQKDNGCSQMFLYFLVISVITSYTLSLGGI 573

Query: 66  GSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE-SVCGEKGAC 124
              +L+LRC+ P  K+ ALG+   A+ +   +P P+ +G ++D++CL W    CG +G+C
Sbjct: 574 PGYILLLRCIQPQLKSFALGIYTLAVRVLAGIPAPVYFGVLIDTSCLKWGFKKCGSRGSC 633

Query: 125 NLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKIK 184
            LYD+  FR  Y G T  +  ++ F+   V +      +  + ++     E   M+  IK
Sbjct: 634 RLYDSHAFRHIYLGLTTLLGTVSVFLSMAVLFVLKK-KYVSKHSSLITTREKIGMSSSIK 692

Query: 185 PETC 188
            ETC
Sbjct: 693 KETC 696

Mediates the Na(+)-independent high affinity transport of organic anions such as the thyroid hormones thyroxine (T4) and rT3. Other potential substrates, such as triiodothyronine (T3), estradiol-17-beta-glucuronide, estrone-3-sulfate and sulfobromophthalein (BSP) are transported with much lower efficiency (By similarity). May play a signifiant role in regulating T4 flux into and out of the brain.
Mus musculus (taxid: 10090)

>sp|Q9EPZ7|SO1C1_RAT Solute carrier organic anion transporter family member 1C1 OS=Rattus norvegicus GN=Slco1c1 PE=1 SV=1

 Score = 93.6 bits (231), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 9   LFSNCTCMSGMWGNGTILPDPLATTASLGPCEND--CVSVKWYIILFSFFV-FIHSTSEV 65
           +FSNCTC+      G   P     +  +G C+ D  C  +  Y ++ S    +  S   +
Sbjct: 521 IFSNCTCV------GFAAPKSGNWSGMMGRCQKDNGCSQMFLYFLVISVITSYTLSLGGI 574

Query: 66  GSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE-SVCGEKGAC 124
              +L+LRC+ P  K+ ALG+   A+ +   +P P+ +G ++D++CL W    CG +G+C
Sbjct: 575 PGYILLLRCIQPQLKSFALGIYTLAVRVLAGIPAPVYFGVLIDTSCLKWGFKKCGSRGSC 634

Query: 125 NLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKIK 184
            LYD+  FR  Y G T  +  ++ F+ T V        +  + ++     E   M+  +K
Sbjct: 635 RLYDSHAFRHIYLGLTTLLGTVSVFLSTAVLLVLKK-KYVSKRSSFITAREKIVMSSSVK 693

Query: 185 PETC 188
            ETC
Sbjct: 694 KETC 697

Mediates the Na(+)-independent high affinity transport of organic anions such as the thyroid hormones thyroxine (T4) and rT3. Other potential substrates, such as triiodothyronine (T3), 17-beta-glucuronosyl estradiol, estrone-3-sulfate and sulfobromophthalein (BSP) are transported with much lower efficiency (By similarity). May play a signifiant role in regulating T4 flux into and out of the brain.

Rattus norvegicus (taxid: 10116)

>sp|O35913|SO1A4_RAT Solute carrier organic anion transporter family member 1A4 OS=Rattus norvegicus GN=Slco1a4 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 15/177 (8%)

Query: 6   TVALFSNCTCMSGMWGNGTILPDPLATTASLGPCEN--DCVS-VKWYIILFSFFVFIHST 62
           T  +F NC+C+    GN         ++A LG C    DC + +++++I+  F  FI+S 
Sbjct: 476 TNMVFQNCSCIQSS-GN---------SSAVLGLCNKGPDCANKLQYFLIIAIFGCFIYSL 525

Query: 63  SEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESV-CGEK 121
           + +   +++LRC+   +K++ +GL  F I +   +P PI +GA++D  CL W ++ CGE 
Sbjct: 526 AGIPGYMVLLRCIKSEEKSLGVGLHAFCIRILAGIPAPIYFGALIDRTCLHWGTLKCGEP 585

Query: 122 GACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINF-ADEETNTPEDDEMQ 177
           GAC +YD + FR  Y G    +   +F     +     +  F  D E++  +  EM+
Sbjct: 586 GACRMYDINSFRRLYLGLPAALRGASFVPAFFILRLTRTFQFPGDIESSKTDHAEMK 642

Mediates the Na(+)-independent transport of organic anions such as taurocholate, cholate, 17-beta-glucuronosyl estradiol, estrone-3-sulfate, the cardiac glycosides ouabain and digoxin and thyroid hormones. May play an especially important role in the brain accumulation and toxicity of digoxin and in the hepatobiliary and renal excretion of cardiac glycosides.

Rattus norvegicus (taxid: 10116)

>sp|P46720|SO1A1_RAT Solute carrier organic anion transporter family member 1A1 OS=Rattus norvegicus GN=Slco1a1 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 87/153 (56%), Gaps = 18/153 (11%)

Query: 6   TVALFSNCTCMSGMWGNGTILPDPLATTASLGPCEN--DCVS-VKWYIILFSFFVFIHST 62
           T  +F +C+C+  + GN         ++A LG C+   +C + +++++IL     FI+S 
Sbjct: 477 TNMVFQDCSCIQSL-GN---------SSAVLGLCKKGPECANRLQYFLILTIIISFIYSL 526

Query: 63  SEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESV-CGEK 121
           + +   ++ LRCV   +K++ +GL  F I +F  +P P+ +GA++D  CL W ++ CG++
Sbjct: 527 TAIPGYMVFLRCVKSEEKSLGVGLHTFCIRVFAGIPAPVYFGALIDRTCLHWGTLKCGQR 586

Query: 122 GACNLYDTDVFRVFYHG----TTGFILLLAFFV 150
           GAC +YD + FR  Y G      G   L AFF+
Sbjct: 587 GACRMYDINSFRHIYLGLPIALRGSSYLPAFFI 619

Mediates the Na(+)-independent transport of organic anions such as bromosulfobromophthalein (BSP) and conjugated (taurocholate) and unconjugated (cholate) bile acids.

Rattus norvegicus (taxid: 10116)

>sp|P46721|SO1A2_HUMAN Solute carrier organic anion transporter family member 1A2 OS=Homo sapiens GN=SLCO1A2 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 80/134 (59%), Gaps = 14/134 (10%)

Query: 9   LFSNCTCMSGMWGNGTILPDPLATTASLGPCEN--DC-VSVKWYIILFSFFVFIHSTSEV 65
           +F NC+C+    GN         ++A LG C+   DC + +++++IL +   FI+S + +
Sbjct: 480 VFQNCSCIQ-TSGN---------SSAVLGLCDKGPDCSLMLQYFLILSAMSSFIYSLAAI 529

Query: 66  GSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESV-CGEKGAC 124
              +++LRC+   +K++ +GL  F   +F  +P PI +GA++DS CL W ++ CGE GAC
Sbjct: 530 PGYMVLLRCMKSEEKSLGVGLHTFCTRVFAGIPAPIYFGALMDSTCLHWGTLKCGESGAC 589

Query: 125 NLYDTDVFRVFYHG 138
            +YD+  FR  Y G
Sbjct: 590 RIYDSTTFRYIYLG 603

Mediates the Na(+)-independent transport of organic anions such as sulfobromophthalein (BSP) and conjugated (taurocholate) and unconjugated (cholate) bile acids (By similarity). Selectively inhibited by the grapefruit juice component naringin.

Homo sapiens (taxid: 9606)

>sp|Q99J94|SO1A6_MOUSE Solute carrier organic anion transporter family member 1A6 OS=Mus musculus GN=Slco1a6 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 18/154 (11%)

Query: 9   LFSNCTCMSGMWGNGTILPDPLATTASLGPCEN--DCVS-VKWYIILFSFFVFIHSTSEV 65
           +F NC+C+    GN         ++A LG C+   DC + +++++I+  F  F +S + +
Sbjct: 480 VFQNCSCIRSS-GN---------SSAVLGLCKKGPDCANKLQYFLIITVFCCFFYSLATI 529

Query: 66  GSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESV-CGEKGAC 124
              ++ LRC+   +K++ +GL  F + LF  +P PI +GA++D  CL W ++ CGE GAC
Sbjct: 530 PGYMVFLRCMKSEEKSLGIGLQAFFMRLFAGIPAPIYFGALIDRTCLHWGTLKCGEPGAC 589

Query: 125 NLYDTDVFRVFYHG----TTGFILLLAFFVDTIV 154
             Y+   FR  Y G      G I+L +FF+  ++
Sbjct: 590 RTYEVSSFRRLYLGLPAALRGSIILPSFFILRLI 623

May mediate the Na(+)-independent transport of organic anions.

Mus musculus (taxid: 10090)

>sp|Q9GMU6|SO1C1_MACFA Solute carrier organic anion transporter family member 1C1 OS=Macaca fascicularis GN=SLCO1C1 PE=2 SV=1

 Score = 87.4 bits (215), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 9   LFSNCTCMSGMWGNGTILPDPLATTASLGPCEND--CVSVKWYIILFSFFV-FIHSTSEV 65
           +F NCTC+      G        ++  +G C+ D  C  +  Y ++ S    +  S   +
Sbjct: 407 IFYNCTCV------GIAASKSGNSSGIVGRCQKDNGCPQMFLYFLVISVITSYTLSLGGI 460

Query: 66  GSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE-SVCGEKGAC 124
              +L+LRC+ P  K+ ALG+   +I +   +P P+ +G ++D++CL W    CG +G+C
Sbjct: 461 PGYILLLRCIKPQLKSFALGIYTLSIRVLAGIPAPVYFGVLIDTSCLKWGFKRCGSRGSC 520

Query: 125 NLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKIK 184
            LYD++VFR  Y G T  +  ++ F+   V +     N+  +  N     E   ++ + +
Sbjct: 521 RLYDSNVFRHIYLGLTVILGTVSIFLSIAVLFILKK-NYVSKHRNFITKRERTMVSTRFQ 579

Query: 185 PETC 188
            E C
Sbjct: 580 KENC 583

Mediates the Na(+)-independent high affinity transport of organic anions such as the thyroid hormones thyroxine (T4) and rT3. Other potential substrates, such as triiodothyronine (T3), estradiol-17-beta-glucuronide, estrone-3-sulfate and sulfobromophthalein (BSP) are transported with much lower efficiency. May play a signifiant role in regulating T4 flux into and out of the brain.

Macaca fascicularis (taxid: 9541)

>sp|O88397|SO1A5_RAT Solute carrier organic anion transporter family member 1A5 OS=Rattus norvegicus GN=Slco1a5 PE=2 SV=2

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 79/135 (58%), Gaps = 14/135 (10%)

Query: 6   TVALFSNCTCMSGMWGNGTILPDPLATTASLGPCEN--DCVS-VKWYIILFSFFVFIHST 62
           T  +F NC+C+    GN         ++A LG C+   +C + +++++I+     FI+S 
Sbjct: 477 TNMVFQNCSCIRSS-GN---------SSAVLGLCKKGPECANKLQYFLIMSVIGSFIYSI 526

Query: 63  SEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESV-CGEK 121
           + +   +++LRC+ P +K++ +GL  F   +F  +P PI +GA++D  CL W ++ CGE 
Sbjct: 527 TAIPGYMVLLRCIKPEEKSLGIGLHAFCTRVFAGIPAPIYFGALIDRTCLHWGTLKCGEP 586

Query: 122 GACNLYDTDVFRVFY 136
           GAC +Y+ + FR  Y
Sbjct: 587 GACRMYNINNFRRIY 601

Mediates the Na(+)-independent transport of organic anions such as taurocholate and thyroid hormones.

Rattus norvegicus (taxid: 10116)

>sp|Q9QXZ6|SO1A1_MOUSE Solute carrier organic anion transporter family member 1A1 OS=Mus musculus GN=Slco1a1 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 16/182 (8%)

Query: 6   TVALFSNCTCMSGMWGNGTILPDPLATTASLGPCEN--DC-VSVKWYIILFSFFVFIHST 62
           T  +F NC+C+ G  GN         ++A LG C+   +C   +++++I   F  FI S 
Sbjct: 477 TNMVFQNCSCI-GSSGN---------SSAVLGLCKKGPECDNKLQYFLIKSVFSSFIFSL 526

Query: 63  SEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESV-CGEK 121
           + +   +++LRCV   +K++ +GL  F I L   +P P+ +GA++D  CL W ++ CG+ 
Sbjct: 527 AAIPGYMVLLRCVKSEEKSIGVGLHAFFIRLLAGIPAPVYFGALIDRTCLHWGTLKCGQP 586

Query: 122 GACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINF-ADEETNTPEDDEMQAMT 180
           GAC +YD + FR  Y G    +   +F     +       +F  D  +   E  EM+ +T
Sbjct: 587 GACRMYDINRFRHIYLGLPAAVRGSSFLPAVFILILMRKFHFPGDIHSPDTELAEMK-LT 645

Query: 181 EK 182
           EK
Sbjct: 646 EK 647

Mediates the Na(+)-independent transport of organic anions such as taurocholate, prostaglandin E2 (PGE2), dehydroepiandrosterone sulfate (DHEAS), 17-beta-glucuronosyl estradiol, estrone-3-sulfate, sulfobromophthalein (BSP), ouabain and gadoxetate.

Mus musculus (taxid: 10090)

>sp|P70502|SO1A3_RAT Solute carrier organic anion transporter family member 1A3 OS=Rattus norvegicus GN=Slco1a3 PE=2 SV=2

 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 20/172 (11%)

Query: 6   TVALFSNCTCMSGMWGNGTILPDPLATTASLGPCEN--DCVS-VKWYIILFSFFVFIHST 62
           T  +F NC+C+            P  ++A LG C    +C + +++ +IL  F   ++S 
Sbjct: 477 TNMVFHNCSCIQ----------SPGNSSAVLGLCNKGPECTNKLQYLLILSGFLSILYSF 526

Query: 63  SEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVW-ESVCGEK 121
           + +   ++ LRC+   +K++ +G+  F I +F  +P PI +GA++D  CL W    CG  
Sbjct: 527 AAIPGYMVFLRCIKSEEKSLGIGIHAFCIRVFAGIPAPIYFGALIDRTCLHWGTQKCGAP 586

Query: 122 GACNLYDTDVFRVFYHGTTGFIL---LLAFFVDTIVWYK---AGSINFADEE 167
           GAC +YD + FR  Y G +  +     L  FV  I+  K    G IN ++ E
Sbjct: 587 GACRMYDINSFRRIYLGMSAALRGSSYLPAFVIVILTRKFSLPGKINSSEME 638

Mediates the Na(+)-independent transport of organic anions such as methotrexate, taurocholate, folate and prostaglandin E2. May contribute to renal secretion and/or reabsorption of hydrophobic anionic compounds. Mediates renal clearance of methotrexate from the blood.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
332016585	741	Solute carrier organic anion transporter	0.904	0.230	0.683	1e-59
328781181	741	PREDICTED: solute carrier organic anion	0.825	0.210	0.708	3e-58
350409868	741	PREDICTED: solute carrier organic anion	0.820	0.209	0.722	3e-58
380012470	739	PREDICTED: solute carrier organic anion	0.825	0.211	0.708	3e-58
383849071	745	PREDICTED: solute carrier organic anion	0.825	0.209	0.708	1e-57
307187458	759	Solute carrier organic anion transporter	0.920	0.229	0.636	1e-57
307192330	739	Solute carrier organic anion transporter	0.883	0.225	0.674	2e-57
193657251	725	PREDICTED: solute carrier organic anion	0.894	0.233	0.626	2e-57
242025588	864	conserved hypothetical protein [Pediculu	0.814	0.178	0.716	7e-57
340718289	741	PREDICTED: solute carrier organic anion	0.825	0.210	0.695	2e-55

>gi|332016585|gb|EGI57466.1| Solute carrier organic anion transporter family member 3A1 [Acromyrmex echinatior]

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/177 (68%), Positives = 139/177 (78%), Gaps = 6/177 (3%)

Query: 7   VALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVG 66
           VA F NC C+    GN TI P+ +  TAS+G C  +C +   Y+ILFS FVFIHSTSEVG
Sbjct: 560 VASFYNCQCI----GNATISPE-VINTASIGYCALECSNFWVYMILFSVFVFIHSTSEVG 614

Query: 67  SMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNL 126
           SMLLILRCVDP DKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE  CGE+GAC L
Sbjct: 615 SMLLILRCVDPRDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWEYACGERGACWL 674

Query: 127 YDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADE-ETNTPEDDEMQAMTEK 182
           YD++VFR+FYHGTTG IL+LAF VD +VWYKAGSI+F +E E  T   +EM  +  +
Sbjct: 675 YDSNVFRMFYHGTTGGILMLAFVVDIVVWYKAGSISFVEEQEGETGTAEEMATLKSQ 731

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328781181|ref|XP_003249934.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like [Apis mellifera]

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 114/161 (70%), Positives = 133/161 (82%), Gaps = 5/161 (3%)

Query: 7   VALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVG 66
           VA F NC C+    G+    P+  A+TA++G CE +C +   Y++LFS FVFIHSTSEVG
Sbjct: 560 VASFYNCQCI----GSNLTTPET-ASTATIGYCELECSNFWVYMVLFSVFVFIHSTSEVG 614

Query: 67  SMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNL 126
           SMLLILRCVDP DKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE  CGE+GAC L
Sbjct: 615 SMLLILRCVDPRDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWEYACGERGACWL 674

Query: 127 YDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEE 167
           YD++VFR+FYHGTTG IL+LAF VD +VWYKAGSI+F +E+
Sbjct: 675 YDSNVFRMFYHGTTGGILILAFVVDIVVWYKAGSISFVEEQ 715

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409868|ref|XP_003488870.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like [Bombus impatiens]

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 117/162 (72%), Positives = 132/162 (81%), Gaps = 7/162 (4%)

Query: 7   VALFSNCTCMSGMWGNGTILPDPLAT-TASLGPCENDCVSVKWYIILFSFFVFIHSTSEV 65
           VA F NC C+      GT L  P  T TA++G CE +C +   Y+ILFS FVFIHSTSEV
Sbjct: 560 VASFYNCQCI------GTNLTAPETTNTATIGYCELECSNFWVYMILFSVFVFIHSTSEV 613

Query: 66  GSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACN 125
           GSMLLILRCVDP DKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE  CGE+GAC 
Sbjct: 614 GSMLLILRCVDPRDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWEYACGERGACW 673

Query: 126 LYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEE 167
           LYD++VFR+FYHGTTG IL+LAF VD +VWYKAGSI+F +E+
Sbjct: 674 LYDSNVFRMFYHGTTGGILILAFVVDIVVWYKAGSISFVEEQ 715

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380012470|ref|XP_003690304.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like [Apis florea]

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 114/161 (70%), Positives = 133/161 (82%), Gaps = 5/161 (3%)

Query: 7   VALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVG 66
           VA F NC C+    G+    P+  A+TA++G CE +C +   Y++LFS FVFIHSTSEVG
Sbjct: 558 VASFYNCQCI----GSNLTTPET-ASTATIGYCELECSNFWVYMVLFSVFVFIHSTSEVG 612

Query: 67  SMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNL 126
           SMLLILRCVDP DKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE  CGE+GAC L
Sbjct: 613 SMLLILRCVDPRDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWEYACGERGACWL 672

Query: 127 YDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEE 167
           YD++VFR+FYHGTTG IL+LAF VD +VWYKAGSI+F +E+
Sbjct: 673 YDSNVFRMFYHGTTGGILILAFVVDIVVWYKAGSISFVEEQ 713

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849071|ref|XP_003700170.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like [Megachile rotundata]

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 114/161 (70%), Positives = 131/161 (81%), Gaps = 5/161 (3%)

Query: 7   VALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVG 66
           VA F NC C+    G     P+ L +TA++G C  +C +   Y++LFS FVFIHSTSEVG
Sbjct: 564 VASFYNCQCI----GPNVTTPETL-STATIGYCALECSNFWVYMVLFSVFVFIHSTSEVG 618

Query: 67  SMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNL 126
           SMLLILRCVDP DKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE  CGE+GAC L
Sbjct: 619 SMLLILRCVDPRDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWEYACGERGACWL 678

Query: 127 YDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEE 167
           YD++VFR+FYHGTTG IL+LAF VD +VWYKAGSINF +E+
Sbjct: 679 YDSNVFRMFYHGTTGGILVLAFVVDIVVWYKAGSINFVEEQ 719

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307187458|gb|EFN72542.1| Solute carrier organic anion transporter family member 3A1 [Camponotus floridanus]

 Score =  227 bits (579), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 114/179 (63%), Positives = 136/179 (75%), Gaps = 5/179 (2%)

Query: 9   LFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVGSM 68
           +F NC C+     +   +P+   +TA++G CE +C +   Y+ILFS FVFIHSTSEVGSM
Sbjct: 580 MFYNCQCIE----HNVTIPEAF-STATIGYCELECSNFWVYMILFSVFVFIHSTSEVGSM 634

Query: 69  LLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYD 128
           LLILRCVDP DKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE  CGE+GAC LYD
Sbjct: 635 LLILRCVDPRDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWEYACGERGACWLYD 694

Query: 129 TDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKIKPET 187
           ++VFR+FYHGTTG IL+LAF VD +VWYKAGSI+F +E+       E  A  +    +T
Sbjct: 695 SNVFRMFYHGTTGGILVLAFVVDIVVWYKAGSISFVEEQEGEEGTAEEMATLKSQDAQT 753

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307192330|gb|EFN75596.1| Solute carrier organic anion transporter family member 3A1 [Harpegnathos saltator]

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 116/172 (67%), Positives = 134/172 (77%), Gaps = 5/172 (2%)

Query: 7   VALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVG 66
           VA F NC C+    G    +P+ + +TA+ G CE +C +   Y+ILFS FVFIHSTSEVG
Sbjct: 558 VASFYNCQCI----GQNITIPEAV-STATNGYCELECSNFWVYMILFSVFVFIHSTSEVG 612

Query: 67  SMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNL 126
           SMLLILRCVDP DKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE  CGE+GAC L
Sbjct: 613 SMLLILRCVDPRDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWEYACGERGACWL 672

Query: 127 YDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQA 178
           YD++VFR+FYHGTTG IL+LAF VD +VWYKAGSI+F +E+       E  A
Sbjct: 673 YDSNVFRMFYHGTTGGILVLAFVVDIVVWYKAGSISFVEEQEGEEGTAEEMA 724

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193657251|ref|XP_001947542.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like isoform 3 [Acyrthosiphon pisum] gi|328702316|ref|XP_003241873.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like isoform 2 [Acyrthosiphon pisum]

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 114/182 (62%), Positives = 135/182 (74%), Gaps = 13/182 (7%)

Query: 10  FSNCTCMSGMWGNGTILPDPLATTASLGPCENDCV-SVKWYIILFSFFVFIHSTSEVGSM 68
           F++C CM           +  AT A  GPC++DC  S  WYI LFS FVFIHSTSEVGSM
Sbjct: 555 FTDCQCM-----------NTNATEAFPGPCKDDCEDSGFWYIALFSLFVFIHSTSEVGSM 603

Query: 69  LLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYD 128
           LLILRCV P DKAMALGLIQFAIGLFGNVPCPI+YGAVVDSACL+WE  CG++GAC+LY+
Sbjct: 604 LLILRCVHPQDKAMALGLIQFAIGLFGNVPCPILYGAVVDSACLIWEMTCGKQGACSLYN 663

Query: 129 TDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKI-KPET 187
           +D FR+FYHG TG +++ AFFVD IVWYKAGSINF D+      ++E+  +T    K ET
Sbjct: 664 SDSFRIFYHGVTGILMMCAFFVDIIVWYKAGSINFEDDHQLPVNEEELSQLTPITDKTET 723

Query: 188 CV 189
            V
Sbjct: 724 TV 725

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242025588|ref|XP_002433206.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212518747|gb|EEB20468.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  225 bits (573), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 114/159 (71%), Positives = 128/159 (80%), Gaps = 5/159 (3%)

Query: 32  TTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAI 91
           +TAS+G C  DC +   YI+LFS FVFIHSTSEVGSMLLILRCVDP DKAMALGLIQFAI
Sbjct: 710 STASIGYCNLDCSNFVPYILLFSMFVFIHSTSEVGSMLLILRCVDPRDKAMALGLIQFAI 769

Query: 92  GLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVD 151
           GLFGNVPCPIVYGAVVD ACL+W+  CG +GAC LYDT+VFR FYHGTTG ILL AFFVD
Sbjct: 770 GLFGNVPCPIVYGAVVDYACLIWDKACGTQGACWLYDTNVFRTFYHGTTGAILLCAFFVD 829

Query: 152 TIVWYKAGSINFADEETNTPED-DEMQAMTEKIKPETCV 189
            +VWYKAGSINF D++   PE  +E+  M  K + ET V
Sbjct: 830 IVVWYKAGSINFVDDQ--LPEQSEELSPM--KQRSETSV 864

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340718289|ref|XP_003397602.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like [Bombus terrestris]

 Score =  220 bits (561), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/161 (69%), Positives = 128/161 (79%), Gaps = 5/161 (3%)

Query: 7   VALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIHSTSEVG 66
           VA F NC C+        +       TA++G CE +C +   Y+ILFS FVFIHSTSEVG
Sbjct: 560 VASFYNCQCI-----GTNLTTPETTNTATIGYCELECSNFWVYMILFSVFVFIHSTSEVG 614

Query: 67  SMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNL 126
           SMLLILRCVDP DKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE  CGE+GAC L
Sbjct: 615 SMLLILRCVDPRDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWEYACGERGACWL 674

Query: 127 YDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEE 167
           YD++VFR+FYHGTTG IL+LAF VD +VWYKAGSI+F +E+
Sbjct: 675 YDSNVFRMFYHGTTGGILILAFVVDIVVWYKAGSISFVEEQ 715

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
FB|FBgn0036732	819	Oatp74D "Organic anion transpo	0.820	0.189	0.538	3e-44
FB|FBgn0050277	684	Oatp58Da "Organic anion transp	0.915	0.252	0.331	2.4e-23
WB|WBGene00012531	758	Y32F6B.1 [Caenorhabditis elega	0.619	0.154	0.375	1.7e-20
WB|WBGene00018566	744	F47E1.2 [Caenorhabditis elegan	0.878	0.223	0.342	1.8e-20
UNIPROTKB|A2VDW7	666	SLCO1A2 "Solute carrier organi	0.714	0.202	0.368	4.9e-20
FB|FBgn0032123	1197	Oatp30B "Organic anion transpo	0.645	0.101	0.36	1e-19
MGI|MGI:1889679	715	Slco1c1 "solute carrier organi	0.915	0.241	0.288	1.2e-19
RGD|628660	716	Slco1c1 "solute carrier organi	0.915	0.241	0.288	1.5e-19
UNIPROTKB|F1PPI9	670	SLCO1A2 "Uncharacterized prote	0.634	0.179	0.373	1.7e-19
UNIPROTKB|F1SQZ5	709	SLCO1C1 "Uncharacterized prote	0.931	0.248	0.287	1.9e-19

FB|FBgn0036732 Oatp74D "Organic anion transporting polypeptide 74D" [Drosophila melanogaster (taxid:7227)]

 Score = 473 (171.6 bits), Expect = 3.0e-44, P = 3.0e-44
 Identities = 90/167 (53%), Positives = 119/167 (71%)

Query:     1 MAPSKTVALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIILFSFFVFIH 60
             + PS    L+S+C C          +PD  A  A  G C+N+C +  ++I++F+  VF+H
Sbjct:   635 LRPSDNRTLYSDCAC----------IPD--APEAVNGYCDNNCKNFIYFILIFAICVFMH 682

Query:    61 STSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGE 120
             STSEVGSMLL++RC  P DKAMA+G+IQ AIGLFGNVPCPI+YGAVVDSACL+W+SVCG+
Sbjct:   683 STSEVGSMLLVMRCTHPKDKAMAMGVIQSAIGLFGNVPCPIIYGAVVDSACLIWKSVCGK 742

Query:   121 KGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEE 167
              GAC+LYD D FR ++ G T  I+ LAF +D +VW KA  I+ A E+
Sbjct:   743 HGACSLYDADTFRQYFLGITAGIMFLAFLMDLVVWRKAHRIDIAPED 789

GO:0015347 "sodium-independent organic anion transmembrane transporter activity" evidence=ISS

GO:0015711 "organic anion transport" evidence=ISS

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

FB|FBgn0050277 Oatp58Da "Organic anion transporting polypeptide 58Da" [Drosophila melanogaster (taxid:7227)]

 Score = 278 (102.9 bits), Expect = 2.4e-23, P = 2.4e-23
 Identities = 61/184 (33%), Positives = 98/184 (53%)

Query:     9 LFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVSVKWYIIL--FSFFVFIHSTSEVG 66
             +++ C C+    G+ ++  +P +  A  G C  DC + ++ I L    F   + ++S+  
Sbjct:   506 IYTGCECL----GSSSLNSEPESQFAVDGTCPVDCFN-EFLIFLGVMCFLKLVGASSKST 560

Query:    67 SMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNL 126
             ++LL LRC+ P +K  ALGL   A  L G +P PI +G ++D+ CLVW   C  KG C L
Sbjct:   561 NLLLALRCMPPDEKTFALGLGSMAASLLGFIPSPIFFGWLIDNYCLVWGKTCSNKGNCWL 620

Query:   127 YDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDD----EMQAMTEK 182
             YDT   R   + +  F + L  F++  VWY A ++   DEE ++P+D     E++  T  
Sbjct:   621 YDTKSMRYALNLSAAFFIFLGGFLNIAVWYHAKNLKIFDEEESSPKDSLKNKEVEMKTID 680

Query:   183 IKPE 186
               PE
Sbjct:   681 SNPE 684

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0015711 "organic anion transport" evidence=ISS

GO:0005215 "transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

WB|WBGene00012531 Y32F6B.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 45/120 (37%), Positives = 71/120 (59%)

Query:    65 VGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGAC 124
             V  ML++LR V P  ++++LG   F + L   +P PI++G ++D +CL+W+  C   G+C
Sbjct:   610 VPGMLIVLRAVPPEHRSVSLGFNGFLVSLLATLPSPIIWGKIIDMSCLLWKKSCDSSGSC 669

Query:   125 NLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPED-DEMQAMTEKI 183
             ++YDTD  RV  H   G + + +   D  VWY A  +   +EET  PED D+ +  TEK+
Sbjct:   670 SVYDTDELRVRLHVIYGCLRIFSLISDVWVWYWARGLKLIEEET--PEDKDKKEEETEKL 727

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

WB|WBGene00018566 F47E1.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 252 (93.8 bits), Expect = 1.8e-20, P = 1.8e-20
 Identities = 61/178 (34%), Positives = 94/178 (52%)

Query:     8 ALFSNCT--CMSGM-WGNGTILPDPLATTASLGP-----CENDCV--SVKWYIILFSFFV 57
             A FS C   C   M +G+  +L       A  G      CEN C   SV +++ +     
Sbjct:   553 AYFSPCHAGCREAMQYGSDPVLDFTSCQCAPGGVVSKKFCENTCKTSSVIFFLTVLPGS- 611

Query:    58 FIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESV 117
             F+     V +ML++LR V P  ++++LGL   A+ LFG +P PI++G V+D+ACLVW+  
Sbjct:   612 FVAGLGVVPAMLILLRSVPPETRSLSLGLQGMAVSLFGTLPSPILWGLVIDAACLVWDKA 671

Query:   118 C-GEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDD 174
             C G +G+C++Y  D  RV+ H     I  +A   D  VW  A ++N  DE  +  +D+
Sbjct:   672 CNGARGSCSIYHPDRLRVWMHLLYVVIRTVALITDVYVWKHAKNLNIMDEPVSEEKDN 729

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|A2VDW7 SLCO1A2 "Solute carrier organic anion transporter family, member 1A2" [Bos taurus (taxid:9913)]

 Score = 247 (92.0 bits), Expect = 4.9e-20, P = 4.9e-20
 Identities = 53/144 (36%), Positives = 84/144 (58%)

Query:     4 SKTVALFSNCTCMSG-----MWGNGTILPDPLATTASLGPCEN--DC-VSVKWYIILFSF 55
             S T A  + C   SG     ++ N + +  P  ++A LG C+   DC + +++++IL  F
Sbjct:   457 SYTSACLAGCEISSGTGRKMVFQNCSCIQTPGNSSAVLGLCDKGKDCSMMLQYFLILSVF 516

Query:    56 FVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE 115
               FI S S +   +++LRCV P +K++ +GL  F   +   +P PI +GA+VDS CL W 
Sbjct:   517 SSFIFSLSAIPGYMVLLRCVKPEEKSLGVGLHAFCTRVLAGIPAPIYFGALVDSTCLHWG 576

Query:   116 SV-CGEKGACNLYDTDVFRVFYHG 138
             ++ CGE GAC +YD++ FR  Y G
Sbjct:   577 TLKCGESGACRIYDSNSFRYIYLG 600

GO:0016020 "membrane" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

FB|FBgn0032123 Oatp30B "Organic anion transporting polypeptide 30B" [Drosophila melanogaster (taxid:7227)]

 Score = 248 (92.4 bits), Expect = 1.0e-19, P = 1.0e-19
 Identities = 45/125 (36%), Positives = 79/125 (63%)

Query:    34 ASLGPCENDCVSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAI-G 92
             A+ GPC   C ++  ++IL  F  F+ +++++  ++++LR V   +++ ALG+ QF I  
Sbjct:   719 ATAGPCATPCRTIYPFLILLFFMTFLVASTQMPLLMIVLRSVSEEERSFALGM-QFVIFR 777

Query:    93 LFGNVPCPIVYGAVVDSACLVWESVCGEKGA-CNLYDTDVFRVFYHGTTGFILLLAFFVD 151
             LFG +P PI++G ++DS C++W+S CGEKG  C +YD + FR  Y G    + L+A  + 
Sbjct:   778 LFGYIPAPILFGNLIDSTCILWKSSCGEKGGRCLIYDIEKFRYKYVGLCASVKLIALVIF 837

Query:   152 TIVWY 156
              + W+
Sbjct:   838 MVDWW 842

GO:0005215 "transporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0015711 "organic anion transport" evidence=ISS

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

MGI|MGI:1889679 Slco1c1 "solute carrier organic anion transporter family, member 1c1" [Mus musculus (taxid:10090)]

 Score = 244 (91.0 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 53/184 (28%), Positives = 90/184 (48%)

Query:     9 LFSNCTCMSGMWGNGTILPDPLATTASLGPCEND--CVSVKWYIILFSFFV-FIHSTSEV 65
             +FSNCTC+      G   P     +  +G C+ D  C  +  Y ++ S    +  S   +
Sbjct:   520 IFSNCTCV------GFAAPKSGNWSGMMGRCQKDNGCSQMFLYFLVISVITSYTLSLGGI 573

Query:    66 GSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE-SVCGEKGAC 124
                +L+LRC+ P  K+ ALG+   A+ +   +P P+ +G ++D++CL W    CG +G+C
Sbjct:   574 PGYILLLRCIQPQLKSFALGIYTLAVRVLAGIPAPVYFGVLIDTSCLKWGFKKCGSRGSC 633

Query:   125 NLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKIK 184
              LYD+  FR  Y G T  +  ++ F+   V +      +  + ++     E   M+  IK
Sbjct:   634 RLYDSHAFRHIYLGLTTLLGTVSVFLSMAVLFVLKK-KYVSKHSSLITTREKIGMSSSIK 692

Query:   185 PETC 188
              ETC
Sbjct:   693 KETC 696

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0015125 "bile acid transmembrane transporter activity" evidence=ISO

GO:0015721 "bile acid and bile salt transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|628660 Slco1c1 "solute carrier organic anion transporter family, member 1c1" [Rattus norvegicus (taxid:10116)]

 Score = 243 (90.6 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 53/184 (28%), Positives = 90/184 (48%)

Query:     9 LFSNCTCMSGMWGNGTILPDPLATTASLGPCEND--CVSVKWYIILFSFFV-FIHSTSEV 65
             +FSNCTC+      G   P     +  +G C+ D  C  +  Y ++ S    +  S   +
Sbjct:   521 IFSNCTCV------GFAAPKSGNWSGMMGRCQKDNGCSQMFLYFLVISVITSYTLSLGGI 574

Query:    66 GSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE-SVCGEKGAC 124
                +L+LRC+ P  K+ ALG+   A+ +   +P P+ +G ++D++CL W    CG +G+C
Sbjct:   575 PGYILLLRCIQPQLKSFALGIYTLAVRVLAGIPAPVYFGVLIDTSCLKWGFKKCGSRGSC 634

Query:   125 NLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMTEKIK 184
              LYD+  FR  Y G T  +  ++ F+ T V        +  + ++     E   M+  +K
Sbjct:   635 RLYDSHAFRHIYLGLTTLLGTVSVFLSTAVLLVLKK-KYVSKRSSFITAREKIVMSSSVK 693

Query:   185 PETC 188
              ETC
Sbjct:   694 KETC 697

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0015125 "bile acid transmembrane transporter activity" evidence=IDA

GO:0015721 "bile acid and bile salt transport" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PPI9 SLCO1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 242 (90.2 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 50/134 (37%), Positives = 80/134 (59%)

Query:     9 LFSNCTCMSGMWGNGTILPDPLATTASLGPCEN--DC-VSVKWYIILFSFFVFIHSTSEV 65
             +F NC+C+    GN         ++A LG C+   DC + +++++IL +   FI+S S +
Sbjct:   480 VFQNCSCIQTS-GN---------SSAVLGLCDKGYDCSMMLQYFLILSAIGSFIYSLSAI 529

Query:    66 GSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESV-CGEKGAC 124
                +++LRC+ P +K++ +GL  F   +F  +P PI +GA+VDS CL W  + CGE GAC
Sbjct:   530 PGYMVLLRCIKPEEKSLGVGLHTFCTRVFAGIPAPIYFGALVDSTCLHWGMLKCGESGAC 589

Query:   125 NLYDTDVFRVFYHG 138
              +YD+  FR  Y G
Sbjct:   590 RIYDSTNFRYIYLG 603

GO:0016020 "membrane" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

UNIPROTKB|F1SQZ5 SLCO1C1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 242 (90.2 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 54/188 (28%), Positives = 95/188 (50%)

Query:     5 KTVALFSNCTCMSGMWGNGTILPDPLATTASLGPCEND--CVSVKWYIILFSFFV-FIHS 61
             KT  +F NCTC+      GT       ++  +G C+ D  C  +  Y ++ S    +  S
Sbjct:   511 KTT-IFYNCTCV------GTAASKSGNSSGMVGRCQKDNGCPRMFLYFLIISVITSYTLS 563

Query:    62 TSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWE-SVCGE 120
                +   +L+LRC+ P  K+ ALG+   A+ +   +P P+ +G ++D++CL W    CG 
Sbjct:   564 LGGIPGYILLLRCIKPQLKSFALGIYTLAVRVLAGIPSPVYFGVLIDTSCLKWGFKRCGS 623

Query:   121 KGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGSINFADEETNTPEDDEMQAMT 180
             +GAC LYD++ FR  Y G T  + +++ F+   V + A   N+  +  +     E   ++
Sbjct:   624 RGACRLYDSNAFRHIYLGLTMMLGIMSIFLSIAVLF-ALKKNYVSKHRSFRTKRERTMVS 682

Query:   181 EKIKPETC 188
              +I+ E C
Sbjct:   683 TRIRKENC 690

GO:0016020 "membrane" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	189
pfam03137	582	pfam03137, OATP, Organic Anion Transporter Polypep	7e-32
TIGR00805	633	TIGR00805, oat, sodium-independent organic anion t	5e-26

>gnl|CDD|217384 pfam03137, OATP, Organic Anion Transporter Polypeptide (OATP) family

 Score =  120 bits (302), Expect = 7e-32
 Identities = 43/102 (42%), Positives = 65/102 (63%), Gaps = 2/102 (1%)

Query: 34  ASLGPCENDCVSVK-WYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIG 92
           AS G C +DC +   +++IL +   FI   S +   +++LRCV P +K++ALG+    I 
Sbjct: 481 ASKGYCPSDCCTQFLYFLILMAILSFIGFLSAIPLYMIVLRCVPPEEKSLALGVQWLLIR 540

Query: 93  LFGNVPCPIVYGAVVDSACLVWESVC-GEKGACNLYDTDVFR 133
           L G +P PI++GA++DS CL W + C G++GAC LYD D  R
Sbjct: 541 LLGFIPAPIIFGALIDSTCLKWGTSCCGKRGACRLYDNDSLR 582

This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the Swiss-Prot database) as belonging to the SLC21 family of transporters. Length = 582

>gnl|CDD|233136 TIGR00805, oat, sodium-independent organic anion transporter

 Score =  103 bits (259), Expect = 5e-26
 Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 10  FSNCTCMSGMWGNGTILPDPLATTASLGPCENDCV-SVKWYIILFSFFVFIHSTSEVGSM 68
           ++NC+C+            P  ++A  G C   C  S+ +++ILF    FI   + V   
Sbjct: 491 YTNCSCV----------QTPGNSSAKKGLCNPSCATSLLYFLILFIPLSFIAFITAVPLY 540

Query: 69  LLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVC-GEKGACNLY 127
           +++LR V+P ++++A+GL    + +FG +P PI++G ++D +CL W+++C G +GAC +Y
Sbjct: 541 MVLLRVVNPEERSLAIGLQWLCMRVFGTIPAPILFGLLIDVSCLHWQTLCCGARGACRMY 600

Query: 128 DTDVFRVFYHGTTGFILLLAFFVDTIVWYKAG 159
           D D  R  Y G T  +      +   +     
Sbjct: 601 DNDNLRNIYLGLTIALRGSGLLLLFFILILMK 632

The Organo Anion Transporter (OAT) Family (TC 2.A.60)Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. Length = 633

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	189
KOG3626|consensus	735		100.0
TIGR00805	633	oat sodium-independent organic anion transporter.	100.0
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.97
KOG1330|consensus	493		96.93
TIGR00892	455	2A0113 monocarboxylate transporter 1.	94.36
TIGR00788	468	fbt folate/biopterin transporter. The only functio	92.01
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	91.49
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	90.18
PRK10489	417	enterobactin exporter EntS; Provisional	88.76
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	86.19
TIGR00900	365	2A0121 H+ Antiporter protein.	83.28
TIGR00893	399	2A0114 d-galactonate transporter.	81.86
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	81.68
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	81.06
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	80.96
KOG2504|consensus	509		80.91
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	80.75

>KOG3626|consensus

Probab=100.00  E-value=4.5e-43  Score=333.65  Aligned_cols=147  Identities=35%  Similarity=0.729  Sum_probs=135.8

Q ss_pred             CCceeeeeceeccCCCCCCccCCCCCCceeecCCCCCCCch-hHHHHHHHHHHHHHHhhccccceeeEEeecCCCCchHH
Q psy11783          5 KTVALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVS-VKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMA   83 (189)
Q Consensus         5 ~~~~~y~~CsCi~~~~~~~~~~~~~~~~~a~~G~C~~~C~~-~~~F~~~~~~~~f~~~~~~~p~~~i~LR~V~~~~ks~A   83 (189)
                      +++++|+||+|++ .+       .+.+..|++|.|+++|.+ +++|++++++.+|+++++++|.++++||+|++||||+|
T Consensus       552 ~~~~~ytnCsCv~-~~-------~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~A  623 (735)
T KOG3626|consen  552 DGNTIYTNCSCVP-TN-------KNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFA  623 (735)
T ss_pred             CCceeeccccccc-cc-------cCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhh
Confidence            4678999999994 11       124568999999999755 89999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCcccceeeeeeeccccccccccCCCccceEEeechhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11783         84 LGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAG  159 (189)
Q Consensus        84 lG~~~~~~rllg~IPgPi~fG~liD~tCl~W~~~Cg~~g~C~~YD~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~k  159 (189)
                      ||+||+++|+||+||+||+||++||++|++|+++|+++|+||+||++.||+.|+++.+++++++++++++.||.+|
T Consensus       624 lG~~~~~irllg~IPsPIifG~~ID~tCl~W~~~C~~~GsC~iYd~~~lr~~y~gl~~~~~~~~~i~~i~~~~v~r  699 (735)
T KOG3626|consen  624 LGFQWMLIRLLGFIPSPIIFGAVIDTTCLLWGKSCGSRGSCLIYDNDSLRYRYLGLHIILKVIALILLIIDLYVWR  699 (735)
T ss_pred             hHHHHHHHHHHhcCCchHhhhhhHhhHHHHhhcccCCCCceeeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999999999999999998888887666

>TIGR00805 oat sodium-independent organic anion transporter

Probab=100.00  E-value=5.7e-42  Score=323.68  Aligned_cols=143  Identities=29%  Similarity=0.701  Sum_probs=133.5

Q ss_pred             eeeeeceeccCCCCCCccCCCCCCceeecCCCCCCCch-hHHHHHHHHHHHHHHhhccccceeeEEeecCCCCchHHHHH
Q psy11783          8 ALFSNCTCMSGMWGNGTILPDPLATTASLGPCENDCVS-VKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGL   86 (189)
Q Consensus         8 ~~y~~CsCi~~~~~~~~~~~~~~~~~a~~G~C~~~C~~-~~~F~~~~~~~~f~~~~~~~p~~~i~LR~V~~~~ks~AlG~   86 (189)
                      ++|+||+|++    +.      ....|++|+|+++|++ +++|++++++..|++++..+|.++++||+|+++|||+|||+
T Consensus       489 ~~y~~CsCi~----~~------~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~  558 (633)
T TIGR00805       489 MVYTNCSCVQ----TP------GNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGL  558 (633)
T ss_pred             ceeccccccc----CC------CCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhH
Confidence            4699999993    21      1345889999999988 88899999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCcccceeeeeeecccccccccc-CCCccceEEeechhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11783         87 IQFAIGLFGNVPCPIVYGAVVDSACLVWESV-CGEKGACNLYDTDVFRVFYHGTTGFILLLAFFVDTIVWYKAGS  160 (189)
Q Consensus        87 ~~~~~rllg~IPgPi~fG~liD~tCl~W~~~-Cg~~g~C~~YD~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~k~  160 (189)
                      |++++|+||+|||||+||++||++|++|+++ ||+||+||+|||++||+.++++++++|++++++++++|+++|+
T Consensus       559 ~~~~~rllg~iP~pi~fG~~iD~sC~~W~~~~cg~~g~C~~Yd~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~  633 (633)
T TIGR00805       559 QWLCMRVFATIPAPILFGLLIDVSCLHWQTLCCGARGACRMYDNDNLRNIYLGLTIALRGSGLLLLFFILILMKK  633 (633)
T ss_pred             HHHHHHHhcCCChhHHHhhhhhchhheeccccCCCCCceeeechHHHHHHHHHHHHHHHHHHHHHHHHHHheecC
Confidence            9999999999999999999999999999976 9999999999999999999999999999999999999999874

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.97  E-value=1.3e-33  Score=263.13  Aligned_cols=103  Identities=41%  Similarity=0.877  Sum_probs=0.0

Q ss_pred             CceeecCCCCCCC-chhHHHHHHHHHHHHHHhhccccceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         31 ATTASLGPCENDC-VSVKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        31 ~~~a~~G~C~~~C-~~~~~F~~~~~~~~f~~~~~~~p~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      +++|++|.|+++| +++++|++++++..+++++..+|.++++||||+++|||+|+|+|++++|+||+|||||+||++||+
T Consensus       435 ~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~  514 (539)
T PF03137_consen  435 NGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS  514 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence            4578899999995 558999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccC-CCccceEEeechhHH
Q psy11783        110 ACLVWESVC-GEKGACNLYDTDVFR  133 (189)
Q Consensus       110 tCl~W~~~C-g~~g~C~~YD~~~l~  133 (189)
                      +|++|+++| |+||+||+|||++||
T Consensus       515 tCl~W~~~C~g~~G~C~~YD~~~lR  539 (539)
T PF03137_consen  515 TCLLWQTNCCGSRGSCWLYDNDKLR  539 (539)
T ss_dssp             -------------------------
T ss_pred             hhhhcCCCCCCCCCeEEEecchhcC
Confidence            999999999 999999999999997

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>KOG1330|consensus

Probab=96.93  E-value=0.0014  Score=61.24  Aligned_cols=64  Identities=23%  Similarity=0.289  Sum_probs=57.5

Q ss_pred             hHHHHHHHHHHHHHHhhccccceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         46 VKWYIILFSFFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        46 ~~~F~~~~~~~~f~~~~~~~p~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      ++.+++++++...+......++.-+.+-+|+|+.|+.|..++.++.++||+.++|-+.|.+.|.
T Consensus       349 ~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~  412 (493)
T KOG1330|consen  349 MIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK  412 (493)
T ss_pred             HHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence            5566677777788888888888889999999999999999999999999999999999999996

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=94.36  E-value=0.026  Score=51.22  Aligned_cols=40  Identities=20%  Similarity=0.285  Sum_probs=33.4

Q ss_pred             eeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         69 LLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        69 ~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      .+..+.+++++++.++|+..... -+|.+=||+++|.++|.
T Consensus       356 ~~~~~~~~~~~~g~~~g~~~~~~-~lg~~igp~i~G~l~~~  395 (455)
T TIGR00892       356 EVLMDLVGAQRFSSAVGLVTIVE-CCAVLIGPPLAGRLVDA  395 (455)
T ss_pred             HHHHHHhhHHHHhhHHhHHHHHH-HHHHHccccceeeeehh
Confidence            34557789999999999987775 55888899999999995

>TIGR00788 fbt folate/biopterin transporter

Probab=92.01  E-value=0.13  Score=47.32  Aligned_cols=54  Identities=7%  Similarity=0.101  Sum_probs=42.2

Q ss_pred             HHHHHHhhccccceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         55 FFVFIHSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        55 ~~~f~~~~~~~p~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      +..+...+..+|.+..+.|.+|+++++.+.|+...+. -+|.+-|+++.|.+.+.
T Consensus       360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~-~lg~~v~~~~gg~l~~~  413 (468)
T TIGR00788       360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASIL-HLGSSVSGFLGVLLMET  413 (468)
T ss_pred             HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence            3344455566777777889999999999999999886 67777777888888775

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>TIGR00889 2A0110 nucleoside transporter

Probab=91.49  E-value=0.084  Score=47.43  Aligned_cols=41  Identities=24%  Similarity=0.329  Sum_probs=35.7

Q ss_pred             eeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         69 LLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        69 ~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      ..+-+.+|+++|+.+.|+......-+|.+-||++.|++.|.
T Consensus       331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~  371 (418)
T TIGR00889       331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEK  371 (418)
T ss_pred             HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            34567889999999999998777788889999999999995

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=90.18  E-value=0.33  Score=43.91  Aligned_cols=40  Identities=20%  Similarity=0.212  Sum_probs=36.2

Q ss_pred             eEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         70 LILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        70 i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      .....+|++.++.|.|+...+..+.|.+-+|.++|+++|.
T Consensus       373 ~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~  412 (467)
T PRK09556        373 AAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADP  412 (467)
T ss_pred             HHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcc
Confidence            3448899999999999999999999999999999999995

>PRK10489 enterobactin exporter EntS; Provisional

Probab=88.76  E-value=0.32  Score=42.94  Aligned_cols=39  Identities=13%  Similarity=0.063  Sum_probs=32.2

Q ss_pred             eEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         70 LILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        70 i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      +..+.+|++.|+.+.|+...+ .-+|..-||.++|++.|.
T Consensus       336 ~~~~~~p~~~~g~~~g~~~~~-~~~g~~~g~~l~G~l~~~  374 (417)
T PRK10489        336 LLQTQTPDEMLGRINGLWTAQ-NVTGDAIGAALLGGLGAM  374 (417)
T ss_pred             HHHhhCCHHHHHHHHHHHHHH-HhhhHhHHHHHHHHHHHH
Confidence            445777888999999998764 457889999999999995

>TIGR00883 2A0106 metabolite-proton symporter

Probab=86.19  E-value=0.084  Score=44.81  Aligned_cols=45  Identities=11%  Similarity=-0.060  Sum_probs=37.8

Q ss_pred             ccceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         65 VGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        65 ~p~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      .+....+.+.+|+++|+.+.|+...+...+|..-+|++.|++.|.
T Consensus       331 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~  375 (394)
T TIGR00883       331 GPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM  375 (394)
T ss_pred             hhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH
Confidence            444445567889999999999988888899999999999999995

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR00900 2A0121 H+ Antiporter protein

Probab=83.28  E-value=0.15  Score=42.83  Aligned_cols=46  Identities=17%  Similarity=0.002  Sum_probs=36.9

Q ss_pred             ccccceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         63 SEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        63 ~~~p~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      ..++......+.+|+++|+.+.|+...+..+ |..-||++.|.++|.
T Consensus       318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~g~l~~~  363 (365)
T TIGR00900       318 INVPQGTLLQRRVPAELLGRVFGAQFSLSHA-AWPLGLILAGPLADH  363 (365)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence            3344445667899999999999999998875 666799999999985

>TIGR00893 2A0114 d-galactonate transporter

Probab=81.86  E-value=1.8  Score=36.33  Aligned_cols=43  Identities=26%  Similarity=0.244  Sum_probs=35.5

Q ss_pred             cceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         66 GSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        66 p~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      +.....-+.+|+++|+.+.|+...+. -+|.+-+|.+.|++.|.
T Consensus       331 ~~~~~~~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~i~g~l~~~  373 (399)
T TIGR00893       331 IGWALISDNAPGNIAGLTGGLINSLG-NLGGIVGPIVIGAIAAT  373 (399)
T ss_pred             HHHHHHHhhcChhHHHHHHHHHHHHH-HHhhhhhhHHhhhhccC
Confidence            33345568889999999999999887 56778899999999985

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=81.68  E-value=0.59  Score=42.07  Aligned_cols=39  Identities=23%  Similarity=0.185  Sum_probs=32.2

Q ss_pred             EEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         71 ILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        71 ~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      ..+.+|+++|+.+.|+...+..+-|.+=||.++|++.|.
T Consensus       372 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~  410 (452)
T PRK11273        372 ALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF  410 (452)
T ss_pred             HHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence            457889999999999998887665555589999999985

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=81.06  E-value=0.85  Score=39.56  Aligned_cols=38  Identities=11%  Similarity=0.108  Sum_probs=31.9

Q ss_pred             EEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         71 ILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        71 ~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      .-..+++++|+.+.|+..+..+ +|.+-+|.++|++.|.
T Consensus       408 ~~~~~p~~~~~~~~~~~~~~~~-lg~~i~~~~~~~~~~~  445 (481)
T TIGR00879       408 VSEIFPLSLRPKGISIAVAANW-LANFIVGFLFPTMLES  445 (481)
T ss_pred             hhccCChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            3578889999999999887665 6788899999999885

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=80.96  E-value=1.9  Score=39.83  Aligned_cols=77  Identities=13%  Similarity=0.307  Sum_probs=57.9

Q ss_pred             HhhccccceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeeccccccccccCCCccceEEeechhHHHHHHHH
Q psy11783         60 HSTSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSACLVWESVCGEKGACNLYDTDVFRVFYHGT  139 (189)
Q Consensus        60 ~~~~~~p~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~tCl~W~~~Cg~~g~C~~YD~~~l~~~~~~l  139 (189)
                      ...+++|...+.--.+++++|+-+.++.|+++ ++|.|=+.+++|.+.|.                 |+..+|-..+.+.
T Consensus       103 ~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Ml-i~G~iv~ai~~g~lL~~-----------------~s~~rL~~v~~~~  164 (403)
T PF03209_consen  103 VHASGTSFLALLADLAPEERRPRVVAIVWVML-IVGIIVSAIVFGRLLDP-----------------FSPERLIQVIQGV  164 (403)
T ss_pred             HhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHH-HHHHHHHHHHHHHHccc-----------------cCHHHHHHHHHHH
Confidence            34567777777778899999999999999864 58999999999999996                 8888887766654


Q ss_pred             HHHHHHHHHHHHHHHHhhh
Q psy11783        140 TGFILLLAFFVDTIVWYKA  158 (189)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~  158 (189)
                      .++    .+++.+++.|-.
T Consensus       165 a~i----~~~l~~ia~wg~  179 (403)
T PF03209_consen  165 ALI----ALLLNLIALWGQ  179 (403)
T ss_pred             HHH----HHHHHHHHHHhc
Confidence            443    344554554444

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG2504|consensus

Probab=80.91  E-value=2.6  Score=39.74  Aligned_cols=40  Identities=20%  Similarity=0.292  Sum_probs=32.8

Q ss_pred             eeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         69 LLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        69 ~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      .++.+.|..++=+-|.|+..++..+. .+-||.+.|++.|.
T Consensus       411 ~i~~~~~g~~~l~~a~Gl~l~~~gi~-~l~gpPiag~~~d~  450 (509)
T KOG2504|consen  411 VILVDLVGLEKLSNAYGLLLLFQGIG-ALVGPPIAGLLYDI  450 (509)
T ss_pred             HHHHHHcChhhcchHHHHHHHHhHHH-HHcCcccceeeeec
Confidence            46678899999999999988776654 68888888999885

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=80.75  E-value=0.58  Score=46.12  Aligned_cols=39  Identities=18%  Similarity=0.291  Sum_probs=33.1

Q ss_pred             eEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         70 LILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        70 i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      ++-..+|.+.|+.++|+...+.| +|.+-||++.|.+++.
T Consensus       672 ~~aEl~Pt~~Rgta~Gi~~~~~r-lGaiigp~i~g~L~~~  710 (742)
T TIGR01299       672 LTVELYPSDKRATAFGFLNALCK-AAAVLGILIFGSFVGI  710 (742)
T ss_pred             HHHHHcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            34566899999999999999988 6788899999998764

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	189
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	93.03
2xut_A	524	Proton/peptide symporter family protein; transport	85.36
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	83.83

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=93.03  E-value=0.028  Score=47.54  Aligned_cols=43  Identities=23%  Similarity=0.143  Sum_probs=38.0

Q ss_pred             ceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         67 SMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        67 ~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      ......+.+|+++|+.+.|+..++..++|.+-+|.+.|++.|.
T Consensus       367 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~  409 (451)
T 1pw4_A          367 IGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF  409 (451)
T ss_dssp             HHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3456678899999999999999999998999999999999995

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=85.36  E-value=0.11  Score=45.28  Aligned_cols=45  Identities=9%  Similarity=0.099  Sum_probs=35.9

Q ss_pred             ccceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeeccc
Q psy11783         65 VGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDSA  110 (189)
Q Consensus        65 ~p~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~t  110 (189)
                      ++......+.+|+++|+.+.|+..++. -+|.+=||.+.|.+.|.+
T Consensus       424 ~~~~~~~~~~~p~~~~g~~~g~~~~~~-~~g~~~g~~~~g~~~~~~  468 (524)
T 2xut_A          424 ATGLEFAYSQAPKAMKGTIMSFWTLSV-TVGNLWVLLANVSVKSPT  468 (524)
T ss_dssp             HHHTTTHHHHCCTTCCTTTHHHHGGGH-HHHHHHHHHHHHHTTSCH
T ss_pred             HHHHHHHHHhCcHHHHhHHHHHHHHHH-HHHHHHHHHHHHHhcccc
Confidence            444456678899999999999987765 567788899999998863

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=83.83  E-value=0.28  Score=42.15  Aligned_cols=44  Identities=2%  Similarity=-0.053  Sum_probs=34.2

Q ss_pred             cccceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeec
Q psy11783         64 EVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVD  108 (189)
Q Consensus        64 ~~p~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD  108 (189)
                      .++......+.+|++.|+.+.|+..+. +-+|.+-+|.+.|.+.|
T Consensus       404 ~~~~~~~~~~~~p~~~~g~~~g~~~~~-~~~g~~i~~~~~~~~~~  447 (491)
T 4aps_A          404 SPVGLSVTTKLAPKAFNSQMMSMWFLS-SSVGSALNAQLVTLYNA  447 (491)
T ss_dssp             TTHHHHHHHHHTTTTCSSSSTHHHHHH-HHHHHHHHHHHGGGGGG
T ss_pred             hHHHHHHHHHhCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            444555777899999999999997665 45677778988888766

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	189
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	95.27
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	89.25

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=95.27  E-value=0.0022  Score=51.79  Aligned_cols=43  Identities=23%  Similarity=0.143  Sum_probs=37.3

Q ss_pred             ceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         67 SMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        67 ~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      ........+|++.|+.+.|+..++.++.|.+-+|++.|++.|.
T Consensus       364 ~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~  406 (447)
T d1pw4a_         364 IGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF  406 (447)
T ss_dssp             HHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3345567889999999999999999999999999999999995

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=89.25  E-value=0.033  Score=43.04  Aligned_cols=48  Identities=13%  Similarity=0.019  Sum_probs=38.9

Q ss_pred             hccccceeeEEeecCCCCchHHHHHHHHHHHhhcCcccceeeeeeecc
Q psy11783         62 TSEVGSMLLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVYGAVVDS  109 (189)
Q Consensus        62 ~~~~p~~~i~LR~V~~~~ks~AlG~~~~~~rllg~IPgPi~fG~liD~  109 (189)
                      ...++....+-+.+|++.|+.+.|+...+.+-+|.+-+|++.|++.|+
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~  375 (417)
T d1pv7a_         328 FLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYES  375 (417)
T ss_dssp             HHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333444456678899999999999988778888889999999999885