Psyllid ID: psy11798

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
Protein Sequence
MSTTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFFLVIFWSILPIYKTIKDITILSVCAYNMKQTTLHYTNFFFLNFLFDALLEHLMKEIARLFVLASLFMQQTETDKQT
Secondary Structure (PSIPRED)
ccccccccccEEccccccccccccccccccccEEEEccccEEEEcccccEEcccccccccccccccccccccccEEEEccccEEEEcccccEEcccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccEEEcccccccEEEcccEEEEcccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEcccccEcccccccccHHHcccccccccEEEcccccEEEEcccccEEcccccEEEccHHcccccccccccEEEcccccEEEEcccccEEcccccEEEccccccccccccccccccEEEcccccEEEEcccccEccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccEcccccEEEEcccccEEccccccEccccHHHccccccccccccccccc
Coil and Loop (DISEMBL)
msttmsvtgyrlRVETCEDINECLElsnqcafrchnvpgsfrcicpygyalapdgrhcidineckenegicedgkciniaggvtcecpegfmlspngmkcidvrqdvcydsyqegtctllrkqpitvkecccsmgqawgryclpcpspnsgepatfwshypkgfFFVLFFLVIFWSILpiyktikdITILSVCAYNMKQTTLHYTNFFFLNFLFDALLEHLMKEIARLFVLASLFMQqtetdkqt
Flexible Loop (DISEMBL)
msttmsvtgyrlrVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCtllrkqpitVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFFLVIFWSILPIYKTIKDITILSVCAYNMKQTTLHYTNFFFLNFLFDALLEHLMKEIARLFVLASLFMqqtetdkqt
Low Complexity Region (SEG)
MSTTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKGfffvlfflvifWSILPIYKTIKDITILSVCAYNMKQTTLHYTnffflnflfDALLEHLMKEIARLFVLASLFMQQTETDKQT
Disordered region (IsUnstruct)
******VTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFFLVIFWSILPIYKTIKDITILSVCAYNMKQTTLHYTNFFFLNFLFDALLEHLMKEIARLFVLASLFM*********
Disordered Region (DISOPRED)
MSTTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFFLVIFWSILPIYKTIKDITILSVCAYNMKQTTLHYTNFFFLNFLFDALLEHLMKEIARLFVLASL***********
Disordered Region (DISEMBL)
MSTTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFFLVIFWSILPIYKTIKDITILSVCAYNMKQTTLHYTNFFFLNFLFDALLEHLMKEIARLFVLASLFMQQTETDKQT
Disordered Region (DISPRO)
*STTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFFLVIFWSILPIYKTIKDITILSVCAYNMKQTTLHYTNFFFLNFLFDALLEHLMKEIARLFVLASLFMQQ*******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSTTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFFLVIFWSILPIYKTIKDITILSVCAYNMKQTTLHYTNFFFLNFLFDALLEHLMKEIARLFVLASLFMQQTETDKQT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	245	2.2.26 [Sep-21-2011]
Q61555	2907	Fibrillin-2 OS=Mus muscul	yes	N/A	0.624	0.052	0.412	7e-28
P35556	2912	Fibrillin-2 OS=Homo sapie	yes	N/A	0.624	0.052	0.412	7e-28
P98133	2871	Fibrillin-1 OS=Bos taurus	no	N/A	0.567	0.048	0.417	1e-25
P35555	2871	Fibrillin-1 OS=Homo sapie	no	N/A	0.563	0.048	0.413	4e-25
Q9TV36	2871	Fibrillin-1 OS=Sus scrofa	yes	N/A	0.567	0.048	0.417	6e-25
Q61554	2871	Fibrillin-1 OS=Mus muscul	no	N/A	0.563	0.048	0.420	1e-24
Q75N90	2809	Fibrillin-3 OS=Homo sapie	no	N/A	0.628	0.054	0.414	4e-24
Q9NS15	1303	Latent-transforming growt	no	N/A	0.844	0.158	0.311	1e-17
A2AJ76	5100	Hemicentin-2 OS=Mus muscu	no	N/A	0.518	0.024	0.348	2e-17
Q61810	1268	Latent-transforming growt	no	N/A	0.624	0.120	0.371	1e-16

>sp|Q61555|FBN2_MOUSE Fibrillin-2 OS=Mus musculus GN=Fbn2 PE=1 SV=2

 Score =  124 bits (311), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 90/160 (56%), Gaps = 7/160 (4%)

Query: 9    GYRLRVET--CEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGRHCIDINE 63
            GY LR +   C+D++EC E  + C  R   C N+ G+F CICP G A  PDG  C+D NE
Sbjct: 2275 GYALREDQKMCKDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMARRPDGEGCVDENE 2334

Query: 64   CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLL--R 121
            C+   GICE+G+C+NI G   CEC EGF  S +G +C+D RQ +C+    +  C +    
Sbjct: 2335 CRTKPGICENGRCVNIIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTMCQMASSS 2394

Query: 122  KQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYP 161
            +  +T  ECCC  G+ WG  C  CP P + +      H P
Sbjct: 2395 RNLVTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGP 2434

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.
Mus musculus (taxid: 10090)

>sp|P35556|FBN2_HUMAN Fibrillin-2 OS=Homo sapiens GN=FBN2 PE=1 SV=3

 Score =  124 bits (310), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 90/160 (56%), Gaps = 7/160 (4%)

Query: 9    GYRLRVET--CEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGRHCIDINE 63
            GY LR +   C+D++EC E  + C  R   C N+ G+F CICP G A  PDG  C+D NE
Sbjct: 2282 GYALREDQKMCKDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMARRPDGEGCVDENE 2341

Query: 64   CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLL--R 121
            C+   GICE+G+C+NI G   CEC EGF  S +G +C+D RQ +C+    +  C +    
Sbjct: 2342 CRTKPGICENGRCVNIIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTICQMASSS 2401

Query: 122  KQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYP 161
            +  +T  ECCC  G+ WG  C  CP P + +      H P
Sbjct: 2402 RNLVTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGP 2441

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Homo sapiens (taxid: 9606)

>sp|P98133|FBN1_BOVIN Fibrillin-1 OS=Bos taurus GN=FBN1 PE=1 SV=1

 Score =  116 bits (291), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 7/146 (4%)

Query: 8    TGYRLRVET--CEDINECLELSNQCA---FRCHNVPGSFRCICPYGYALAPDGRHCIDIN 62
             GY LR +   C+D +EC E  + CA     C N+ G++ CIC  GY   PDG  C+D N
Sbjct: 2234 AGYVLREDRRMCKDEDECEEGKHDCAEKQMECKNLIGTYLCICGPGYQRRPDGEGCVDEN 2293

Query: 63   ECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTL--L 120
            EC+   GICE+G+C+N  G  TCEC +GF  SPN  +C+D R+  C+    +  C +   
Sbjct: 2294 ECQTKPGICENGRCLNTRGSYTCECNDGFTASPNQDECLDNREGYCFTEVLQNMCQIGSS 2353

Query: 121  RKQPITVKECCCSMGQAWGRYCLPCP 146
             + P+T  ECCC  G+ WG +C  CP
Sbjct: 2354 NRNPVTKSECCCDGGRGWGPHCEICP 2379

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Bos taurus (taxid: 9913)

>sp|P35555|FBN1_HUMAN Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3

 Score =  115 bits (287), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 7/145 (4%)

Query: 9    GYRLRVET--CEDINECLELSNQCA---FRCHNVPGSFRCICPYGYALAPDGRHCIDINE 63
            GY LR +   C+D +EC E  + C      C N+ G++ CIC  GY   PDG  C+D NE
Sbjct: 2235 GYVLREDRRMCKDEDECEEGKHDCTEKQMECKNLIGTYMCICGPGYQRRPDGEGCVDENE 2294

Query: 64   CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTL--LR 121
            C+   GICE+G+C+N  G  TCEC +GF  SPN  +C+D R+  C+    +  C +    
Sbjct: 2295 CQTKPGICENGRCLNTRGSYTCECNDGFTASPNQDECLDNREGYCFTEVLQNMCQIGSSN 2354

Query: 122  KQPITVKECCCSMGQAWGRYCLPCP 146
            + P+T  ECCC  G+ WG +C  CP
Sbjct: 2355 RNPVTKSECCCDGGRGWGPHCEICP 2379

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Homo sapiens (taxid: 9606)

>sp|Q9TV36|FBN1_PIG Fibrillin-1 OS=Sus scrofa GN=FBN1 PE=2 SV=1

 Score =  114 bits (285), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 83/146 (56%), Gaps = 7/146 (4%)

Query: 8    TGYRLRVET--CEDINECLELSNQCA---FRCHNVPGSFRCICPYGYALAPDGRHCIDIN 62
            TGY LR +   C+D +EC E  + CA     C N+ G + CIC  GY   PDG  C+D N
Sbjct: 2234 TGYVLREDRRMCKDEDECEEGKHDCAEKQMECKNLIGMYICICGPGYQRRPDGEGCVDEN 2293

Query: 63   ECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTL--L 120
            EC+   GICE+G+C+N  G  TCEC +GF  SP   +C+D R+  C+    +  C +   
Sbjct: 2294 ECQTKPGICENGRCLNTRGSYTCECNDGFTASPTQDECLDNREGYCFTEVLQNMCQIGSS 2353

Query: 121  RKQPITVKECCCSMGQAWGRYCLPCP 146
             + P+T  ECCC  G+ WG +C  CP
Sbjct: 2354 NRNPVTKSECCCDGGRGWGPHCEICP 2379

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Sus scrofa (taxid: 9823)

>sp|Q61554|FBN1_MOUSE Fibrillin-1 OS=Mus musculus GN=Fbn1 PE=1 SV=1

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 82/145 (56%), Gaps = 7/145 (4%)

Query: 9    GYRLRVET--CEDINECLELSNQCA---FRCHNVPGSFRCICPYGYALAPDGRHCIDINE 63
            GY LR +   C+D +EC E  + C      C N+ G++ CIC  GY   PDG  CID NE
Sbjct: 2235 GYVLREDRRMCKDEDECAEGKHDCTEKQMECKNLIGTYMCICGPGYQRRPDGEGCIDENE 2294

Query: 64   CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTL--LR 121
            C+   GICE+G+C+N  G  TCEC +GF  SP   +C+D R+  C+    E  C +    
Sbjct: 2295 CQTKPGICENGRCLNTLGSYTCECNDGFTASPTQDECLDNREGYCFSEVFENMCQIGSSN 2354

Query: 122  KQPITVKECCCSMGQAWGRYCLPCP 146
            + P+T  ECCC  G+ WG +C  CP
Sbjct: 2355 RNPVTKSECCCVGGRGWGLHCEICP 2379

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Mus musculus (taxid: 10090)

>sp|Q75N90|FBN3_HUMAN Fibrillin-3 OS=Homo sapiens GN=FBN3 PE=2 SV=3

 Score =  111 bits (278), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 85/164 (51%), Gaps = 10/164 (6%)

Query: 9    GYRLRVE--TCEDINECLELSNQC-AFRCHNVPGSFRCICPYGYALAPDGRHCIDINECK 65
            G+ L  +   C D NECL L+  C    C N+ GSFRCICP G+ +  D  HCIDI+EC 
Sbjct: 1917 GFELTADGKNCVDTNECLSLAGTCLPGTCQNLEGSFRCICPPGFQVQSD--HCIDIDECS 1974

Query: 66   ENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPI 125
            E   +C  G C N  G   C CP GF+LS NG +C D RQ  C+  ++ G C++ +    
Sbjct: 1975 EEPNLCLFGTCTNSPGSFQCLCPPGFVLSDNGHRCFDTRQSFCFTRFEAGKCSVPKAFNT 2034

Query: 126  TVKECCCSM--GQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFV 167
            T   CCCS   G+ WG  C  CP   S   A F    P G   V
Sbjct: 2035 TKTRCCCSKRPGEGWGDPCELCPQEGS---AAFQELCPFGHGAV 2075

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-containing microfibrils provide long-term force bearing structural support.

Homo sapiens (taxid: 9606)

>sp|Q9NS15|LTBP3_HUMAN Latent-transforming growth factor beta-binding protein 3 OS=Homo sapiens GN=LTBP3 PE=1 SV=4

 Score = 90.1 bits (222), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 106/225 (47%), Gaps = 18/225 (8%)

Query: 7    VTGYRLRVET--CEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
            ++GY L  +   CEDI+EC   +      C N  GS+RC+CP G+ L   GR C DI+EC
Sbjct: 812  LSGYHLSRDRSHCEDIDECDFPAACIGGDCINTNGSYRCLCPQGHRLV-GGRKCQDIDEC 870

Query: 65   KENEGIC-EDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQ----DVCYDSYQEGT-CT 118
             ++  +C   G C N+ G   C C EGF  + +   C +V Q      CY ++ +   C 
Sbjct: 871  SQDPSLCLPHGACKNLQGSYVCVCDEGFTPTQDQHGCEEVEQPHHKKECYLNFDDTVFCD 930

Query: 119  LLRKQPITVKECCCSMGQAWGRYC--LPCPSPNSGEPATFWSHYPKGFFFVLFFLVIFWS 176
             +    +T +ECCCS+G  WG +C   PCP  +S E   F S  P G  +     ++ + 
Sbjct: 931  SVLATNVTQQECCCSLGAGWGDHCEIYPCPVYSSAE---FHSLCPDGKGYTQDNNIVNYG 987

Query: 177  ILPIYKTIKDITILS--VCAYNM-KQTTLHYTNFFFLNFLFDALL 218
            I P ++ I +  +    +C       T   Y  +    F +D  L
Sbjct: 988  I-PAHRDIDECMLFGSEICKEGKCVNTQPGYECYCKQGFYYDGNL 1031

May be involved in the assembly, secretion and targeting of TGFB1 to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGFB1. May have a structural role in the extra cellular matrix (ECM).

Homo sapiens (taxid: 9606)

>sp|A2AJ76|HMCN2_MOUSE Hemicentin-2 OS=Mus musculus GN=Hmcn2 PE=1 SV=1

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 5/132 (3%)

Query: 17   CEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGIC-EDGK 75
            C D +EC    + C+  C N PG F C CP G++LA D R+C D++EC  N  +C E+ +
Sbjct: 4666 CVDKDECSGGPSPCSHTCRNAPGHFSCSCPTGFSLAWDHRNCRDVDECAGNTHLCQEEQR 4725

Query: 76   CINIAGGVTC--ECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCS 133
            C+N+ G   C   C  GF ++ +G  C DV  D C +   E     L +       C C 
Sbjct: 4726 CVNLLGSYNCLASCRPGFRVTADGSNCEDV--DECLEQLDECHYNQLCENTPGGHHCGCP 4783

Query: 134  MGQAWGRYCLPC 145
             G     + LPC
Sbjct: 4784 RGYRQQGHSLPC 4795

Mus musculus (taxid: 10090)

>sp|Q61810|LTBP3_MOUSE Latent-transforming growth factor beta-binding protein 3 OS=Mus musculus GN=Ltbp3 PE=1 SV=3

 Score = 86.7 bits (213), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 87/167 (52%), Gaps = 14/167 (8%)

Query: 7   VTGYRLRVET--CEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHC-IDINE 63
           ++GY L  +   CEDI+EC   +      C N  GS+RC+CP G+ L   GR C  DI+E
Sbjct: 807 LSGYHLSRDRSRCEDIDECDFPAACIGGDCINTNGSYRCLCPLGHRLV-GGRKCKKDIDE 865

Query: 64  CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQ----DVCYDSYQEGT-CT 118
           C ++ G+C    C N+ G   C C EGF L+ +   C +V Q      CY ++ +   C 
Sbjct: 866 CSQDPGLCLPHACENLQGSYVCVCDEGFTLTQDQHGCEEVEQPHHKKECYLNFDDTVFCD 925

Query: 119 LLRKQPITVKECCCSMGQAWGRYC--LPCPSPNSGEPATFWSHYPKG 163
            +    +T +ECCCS+G  WG +C   PCP  +S E   F S  P G
Sbjct: 926 SVLATNVTQQECCCSLGAGWGDHCEIYPCPVYSSAE---FHSLVPDG 969

May be involved in the assembly, secretion and targeting of TGF- beta1 to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGF-beta1. May have a structural role in the extra cellular matrix (ECM).

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
328715164	3100	PREDICTED: fibrillin-2-like [Acyrthosiph	0.587	0.046	0.547	2e-37
242016322	2816	Fibrillin-2 precursor, putative [Pedicul	0.587	0.051	0.5	2e-34
332018680	2757	Fibrillin-2 [Acromyrmex echinatior]	0.595	0.052	0.509	1e-33
307196014	2862	Fibrillin-2 [Harpegnathos saltator]	0.563	0.048	0.521	2e-33
307166306	2876	Fibrillin-2 [Camponotus floridanus]	0.563	0.047	0.521	3e-33
189234367	2933	PREDICTED: similar to fibrillin 2 [Tribo	0.546	0.045	0.435	6e-33
350416792	2865	PREDICTED: fibrillin-2-like [Bombus impa	0.555	0.047	0.430	3e-32
340721645	2865	PREDICTED: fibrillin-2-like [Bombus terr	0.555	0.047	0.430	3e-32
328787226	2870	PREDICTED: fibrillin-2-like [Apis mellif	0.555	0.047	0.424	7e-32
383864528	2865	PREDICTED: fibrillin-2-like [Megachile r	0.563	0.048	0.510	1e-31

>gi|328715164|ref|XP_001945971.2| PREDICTED: fibrillin-2-like [Acyrthosiphon pisum]

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/148 (54%), Positives = 96/148 (64%), Gaps = 4/148 (2%)

Query: 7    VTGYRLRVET--CEDINECLELSNQCA--FRCHNVPGSFRCICPYGYALAPDGRHCIDIN 62
            ++GY L  +   C DI+EC E+ + C    RC N+ GSF C CP GY L+     C+DIN
Sbjct: 2116 ISGYILSTDGQHCRDIDECTEIPDTCPQPGRCQNLMGSFLCTCPPGYRLSAAKNSCLDIN 2175

Query: 63   ECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRK 122
            EC+E  GIC+ G C+N  GGV C+CPEGF+LS NGMKCID RQD C+D Y  G C   RK
Sbjct: 2176 ECQEMPGICDGGTCMNTDGGVICDCPEGFVLSSNGMKCIDTRQDHCFDKYLSGNCLAPRK 2235

Query: 123  QPITVKECCCSMGQAWGRYCLPCPSPNS 150
            Q IT KECCCS G  WGR C  CP P S
Sbjct: 2236 QRITEKECCCSAGGGWGRLCTACPKPGS 2263

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242016322|ref|XP_002428778.1| Fibrillin-2 precursor, putative [Pediculus humanus corporis] gi|212513463|gb|EEB16040.1| Fibrillin-2 precursor, putative [Pediculus humanus corporis]

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/148 (50%), Positives = 96/148 (64%), Gaps = 4/148 (2%)

Query: 7    VTGYRLRVE--TCEDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHCIDIN 62
            V GY +  +   C D++EC E  N C    +C N+ GS+ C+CP GY    +   C+DI+
Sbjct: 1885 VDGYTMTSDEMNCRDVDECTEHPNPCQHPGKCQNLMGSYTCLCPTGYKSINNNTACVDID 1944

Query: 63   ECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRK 122
            EC ENEG CEDG CIN  G   C+CP+GF++S NGMKCID+R+D CYD +  G C   R 
Sbjct: 1945 ECVENEGTCEDGTCINTDGSFRCDCPDGFIVSSNGMKCIDIRKDFCYDQFYRGICDTPRM 2004

Query: 123  QPITVKECCCSMGQAWGRYCLPCPSPNS 150
            + I+VKECCCSMG+AWG+ C  CP   S
Sbjct: 2005 EFISVKECCCSMGKAWGKNCEQCPPEGS 2032

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018680|gb|EGI59252.1| Fibrillin-2 [Acromyrmex echinatior]

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/153 (50%), Positives = 99/153 (64%), Gaps = 7/153 (4%)

Query: 15   ETCEDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE 72
            + C DI+EC E+   C    +C N+ GS+ C CP GY L    R C+DI+EC E   ICE
Sbjct: 1854 QHCRDIDECHEIPGLCPSPGKCQNLMGSYICTCPLGYELDHSRRKCVDIDECIETRDICE 1913

Query: 73   DGKCINIAGGVTCECPEGFMLS--PNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKEC 130
            +G+CIN  GGV CECP G+ LS  PN +KCIDVR++ CYD+Y+ G CT  R+  +T K C
Sbjct: 1914 NGQCINTEGGVICECPVGYRLSERPNSLKCIDVREEQCYDNYRRGQCTFPREGGMTKKHC 1973

Query: 131  CCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKG 163
            CC+MG+AWGRYC  CP  NS E   F    P+G
Sbjct: 1974 CCTMGKAWGRYCEQCPPENSEE---FKKMCPEG 2003

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196014|gb|EFN77739.1| Fibrillin-2 [Harpegnathos saltator]

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/142 (52%), Positives = 95/142 (66%), Gaps = 4/142 (2%)

Query: 15   ETCEDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE 72
            + C DI+EC E+   C    +C N+ GS+ C CP GY L    + C+D++EC E   ICE
Sbjct: 1961 QHCRDIDECHEIPGLCPSPGKCQNLMGSYICSCPPGYELDHTRKKCVDVDECVETRDICE 2020

Query: 73   DGKCINIAGGVTCECPEGFMLS--PNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKEC 130
            +G+CIN  GGV CECP G+ LS  PN M+CIDVRQ+ CYD+Y+ G CT  R+  +T K C
Sbjct: 2021 NGRCINTEGGVICECPVGYQLSDKPNSMRCIDVRQEQCYDTYRRGQCTSPREGGVTRKHC 2080

Query: 131  CCSMGQAWGRYCLPCPSPNSGE 152
            CC+MG+AWGRYC  CP  NS E
Sbjct: 2081 CCTMGKAWGRYCEACPPENSEE 2102

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307166306|gb|EFN60488.1| Fibrillin-2 [Camponotus floridanus]

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/142 (52%), Positives = 96/142 (67%), Gaps = 4/142 (2%)

Query: 15   ETCEDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE 72
            + C DI+EC E+   C    +C N+ GS+ C CP GY L    + C+D++EC E   ICE
Sbjct: 1974 QHCRDIDECDEIPGLCPSPGKCQNLMGSYICSCPLGYELDHTRKRCVDVDECMETRDICE 2033

Query: 73   DGKCINIAGGVTCECPEGFMLS--PNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKEC 130
            +G+CIN  GGV CECP G+ LS  PN +KCIDVR++ CYDSY+ G CTL R+  +T K C
Sbjct: 2034 NGQCINTEGGVICECPVGYQLSEKPNSLKCIDVREEQCYDSYRRGQCTLPREGGMTKKHC 2093

Query: 131  CCSMGQAWGRYCLPCPSPNSGE 152
            CC+MG+AWGRYC  CP  +S E
Sbjct: 2094 CCTMGRAWGRYCEECPPEDSEE 2115

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234367|ref|XP_974344.2| PREDICTED: similar to fibrillin 2 [Tribolium castaneum]

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 99/177 (55%), Gaps = 43/177 (24%)

Query: 14   VETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRH---------------- 57
            ++ CED+NEC E+ NQCAFRCHNVPGSFRCICPYGYALAPDGRH                
Sbjct: 2216 LQVCEDVNECHEMGNQCAFRCHNVPGSFRCICPYGYALAPDGRHCQDVDECLTPANNCKF 2275

Query: 58   -------------------------CIDINECKENEGICEDGKCINIAGGVTCECPEGFM 92
                                     C DINEC  N G+C++G C+N+ G   C+C EG+ 
Sbjct: 2276 QCKNLIGSFMCICPEGYTQVGLTDDCQDINECAINPGLCQNGNCVNLQGSYRCDCYEGYE 2335

Query: 93   LSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQ--PITVKECCCSMGQAWGRYCLPCPS 147
             + +  +CID RQ +C+     G CT   ++   +T  +CCCSMG+AWG +C  CPS
Sbjct: 2336 PTHDRKRCIDRRQGICFRKLIHGRCTTHNRELKHVTKADCCCSMGEAWGPHCELCPS 2392

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350416792|ref|XP_003491105.1| PREDICTED: fibrillin-2-like [Bombus impatiens]

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 95/179 (53%), Gaps = 43/179 (24%)

Query: 15   ETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKE-------- 66
            + CED+NECLE+ NQCAFRCHN PGSFRCICPYGY LAPDGRHCID++EC          
Sbjct: 2198 QVCEDVNECLEIGNQCAFRCHNAPGSFRCICPYGYTLAPDGRHCIDVDECATPANSCKYQ 2257

Query: 67   ---------------------------------NEGICEDGKCINIAGGVTCECPEGFML 93
                                             N G+C +G+C+N+     C C +GF  
Sbjct: 2258 CKNLIGSFMCICPPGYQQIGMADECKDIDECAINSGLCRNGRCVNLEASYQCLCYDGFEQ 2317

Query: 94   SPNGMKCIDVRQDVCYDSYQEGTCTLLRK--QPITVKECCCSMGQAWGRYCLPCPSPNS 150
            SP+G  CID R   C+     G CT      + +T  +CCC+MG AWG YC  CPS +S
Sbjct: 2318 SPDGKSCIDRRIGYCFLQTIAGRCTTRASDVKTVTKADCCCTMGAAWGPYCEICPSKDS 2376

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340721645|ref|XP_003399227.1| PREDICTED: fibrillin-2-like [Bombus terrestris]

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 95/179 (53%), Gaps = 43/179 (24%)

Query: 15   ETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKE-------- 66
            + CED+NECLE+ NQCAFRCHN PGSFRCICPYGY LAPDGRHCID++EC          
Sbjct: 2198 QVCEDVNECLEIGNQCAFRCHNAPGSFRCICPYGYTLAPDGRHCIDVDECATPANNCKYQ 2257

Query: 67   ---------------------------------NEGICEDGKCINIAGGVTCECPEGFML 93
                                             N G+C +G+C+N+     C C +GF  
Sbjct: 2258 CKNLIGSFMCICPPGYQQIGMADECKDIDECAINSGLCRNGRCVNLEASYQCLCYDGFEQ 2317

Query: 94   SPNGMKCIDVRQDVCYDSYQEGTCTLLRK--QPITVKECCCSMGQAWGRYCLPCPSPNS 150
            SP+G  CID R   C+     G CT      + +T  +CCC+MG AWG YC  CPS +S
Sbjct: 2318 SPDGKSCIDRRIGYCFLQTIAGRCTTRASDVKTVTKADCCCTMGAAWGPYCEICPSKDS 2376

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787226|ref|XP_003250904.1| PREDICTED: fibrillin-2-like [Apis mellifera]

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 95/179 (53%), Gaps = 43/179 (24%)

Query: 15   ETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKE-------- 66
            + CED+NECLEL NQCAFRCHN PGSFRCICPYGY LAPD RHCID++EC          
Sbjct: 2202 QVCEDVNECLELGNQCAFRCHNAPGSFRCICPYGYTLAPDARHCIDVDECATPANNCKYQ 2261

Query: 67   ---------------------------------NEGICEDGKCINIAGGVTCECPEGFML 93
                                             N G+C +G+C+N+ G   C C +GF  
Sbjct: 2262 CKNLIGSFMCICPPGYQQIGMTDECKDVDECAINSGLCRNGQCVNVEGSYQCLCYDGFEQ 2321

Query: 94   SPNGMKCIDVRQDVCYDSYQEGTCTLLRK--QPITVKECCCSMGQAWGRYCLPCPSPNS 150
            SP+G  CID R   C+     G CT      + +T  +CCC+MG AWG +C  CP+ +S
Sbjct: 2322 SPDGKSCIDRRMGYCFLQTIGGRCTARTSDLKTVTKADCCCTMGAAWGPHCEICPTKDS 2380

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864528|ref|XP_003707730.1| PREDICTED: fibrillin-2-like [Megachile rotundata]

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/145 (51%), Positives = 95/145 (65%), Gaps = 7/145 (4%)

Query: 15   ETCEDINECLELSNQCA--FRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE 72
            + C D++EC E+   C    +C N+ GS+ C CP GY L    R C+D++EC E +GICE
Sbjct: 1959 QHCRDVDECHEVPGLCPPPGKCQNLMGSYICNCPPGYELDHTRRRCVDVDECVETQGICE 2018

Query: 73   DGKCINIAGGVTCECPEGFMLS--PNGMKCIDVRQDVCYDSYQ---EGTCTLLRKQPITV 127
            +G+CIN  GGV CECP GF LS  PN M+CIDVR++ CYD Y     G CT  R   +T 
Sbjct: 2019 NGRCINTEGGVICECPVGFKLSDKPNSMRCIDVREEFCYDRYVPHLRGRCTHPRTGAMTK 2078

Query: 128  KECCCSMGQAWGRYCLPCPSPNSGE 152
            K CCC+MG+AWG+YC  CPS +S E
Sbjct: 2079 KHCCCTMGKAWGKYCEACPSEDSEE 2103

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
UNIPROTKB|I3LFU9	482	I3LFU9 "Uncharacterized protei	0.608	0.309	0.438	2.5e-33
UNIPROTKB|F1M5Q4	859	Fbn2 "Protein Fbn2" [Rattus no	0.624	0.178	0.412	1.3e-32
UNIPROTKB|I3LI73	881	I3LI73 "Uncharacterized protei	0.608	0.169	0.438	2.9e-32
RGD|620910	2906	Fbn2 "fibrillin 2" [Rattus nor	0.624	0.052	0.412	8.8e-32
MGI|MGI:95490	2907	Fbn2 "fibrillin 2" [Mus muscul	0.624	0.052	0.412	8.8e-32
UNIPROTKB|P35556	2912	FBN2 "Fibrillin-2" [Homo sapie	0.624	0.052	0.412	8.8e-32
UNIPROTKB|E1C3A6	2914	FBN2 "Uncharacterized protein"	0.624	0.052	0.406	1.8e-31
UNIPROTKB|F1MTZ4	3672	Bt.110891 "Uncharacterized pro	0.624	0.041	0.406	3.9e-31
UNIPROTKB|E2RS46	2921	FBN2 "Uncharacterized protein"	0.624	0.052	0.4	8e-31
UNIPROTKB|E1C5P6	2869	FBN3 "Uncharacterized protein"	0.628	0.053	0.397	4.3e-30

UNIPROTKB|I3LFU9 I3LFU9 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 68/155 (43%), Positives = 86/155 (55%)

Query:    10 YRLRVETCEDINECLELSNQCAFR-CHNVPGSFRCICPYGYALAPDGRHCIDINECKENE 68
             +R   ETCEDI+ECL  SN C    C N+ GS+ C C  G  L P G  C+D+NEC+   
Sbjct:    42 FRQDTETCEDIDECL--SNPCVNGVCRNLAGSYACECAPGSRLGPSGTVCLDVNECEVFP 99

Query:    69 GICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVK 128
             G+C +G C+N AG   C+CPEG  L   G  C+DVR ++CY  + E  C         + 
Sbjct:   100 GVCTNGHCLNTAGSFRCQCPEGLTLDATGRLCVDVRLELCYLRWDEDECGAALPGKYRMD 159

Query:   129 ECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKG 163
              CCCS+G AWG  C  CP P S   A F S  P+G
Sbjct:   160 VCCCSVGAAWGATCEACPKPES---AAFASLCPRG 191

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

UNIPROTKB|F1M5Q4 Fbn2 "Protein Fbn2" [Rattus norvegicus (taxid:10116)]

 Score = 366 (133.9 bits), Expect = 1.3e-32, P = 1.3e-32
 Identities = 66/160 (41%), Positives = 90/160 (56%)

Query:     9 GYRLRVET--CEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGRHCIDINE 63
             GY LR +   C+D++EC E  + C  R   C N+ G+F CICP G A  PDG  C+D NE
Sbjct:   227 GYALREDQKMCKDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMARRPDGEGCVDENE 286

Query:    64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR-- 121
             C+   GICE+G+C+NI G   CEC EGF  S +G +C+D RQ +C+    +  C +    
Sbjct:   287 CRTKPGICENGRCVNIIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTMCQMASSS 346

Query:   122 KQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYP 161
             +  +T  ECCC  G+ WG  C  CP P + +      H P
Sbjct:   347 RNLVTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGP 386

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0060346 "bone trabecula formation" evidence=IEA

UNIPROTKB|I3LI73 I3LI73 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 363 (132.8 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 68/155 (43%), Positives = 86/155 (55%)

Query:    10 YRLRVETCEDINECLELSNQCAFR-CHNVPGSFRCICPYGYALAPDGRHCIDINECKENE 68
             +R   ETCEDI+ECL  SN C    C N+ GS+ C C  G  L P G  C+D+NEC+   
Sbjct:   163 FRQDTETCEDIDECL--SNPCVNGVCRNLAGSYACECAPGSRLGPSGTVCLDVNECEVFP 220

Query:    69 GICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVK 128
             G+C +G C+N AG   C+CPEG  L   G  C+DVR ++CY  + E  C         + 
Sbjct:   221 GVCTNGHCLNTAGSFRCQCPEGLTLDATGRLCVDVRLELCYLRWDEDECGAALPGKYRMD 280

Query:   129 ECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKG 163
              CCCS+G AWG  C  CP P S   A F S  P+G
Sbjct:   281 VCCCSVGAAWGATCEACPKPES---AAFASLCPRG 312

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

RGD|620910 Fbn2 "fibrillin 2" [Rattus norvegicus (taxid:10116)]

 Score = 366 (133.9 bits), Expect = 8.8e-32, P = 8.8e-32
 Identities = 66/160 (41%), Positives = 90/160 (56%)

Query:     9 GYRLRVET--CEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGRHCIDINE 63
             GY LR +   C+D++EC E  + C  R   C N+ G+F CICP G A  PDG  C+D NE
Sbjct:  2274 GYALREDQKMCKDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMARRPDGEGCVDENE 2333

Query:    64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR-- 121
             C+   GICE+G+C+NI G   CEC EGF  S +G +C+D RQ +C+    +  C +    
Sbjct:  2334 CRTKPGICENGRCVNIIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTMCQMASSS 2393

Query:   122 KQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYP 161
             +  +T  ECCC  G+ WG  C  CP P + +      H P
Sbjct:  2394 RNLVTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGP 2433

GO:0030326 "embryonic limb morphogenesis" evidence=ISO

GO:0030501 "positive regulation of bone mineralization" evidence=ISO

GO:0035108 "limb morphogenesis" evidence=ISO

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=ISO

GO:0045669 "positive regulation of osteoblast differentiation" evidence=ISO

GO:0060346 "bone trabecula formation" evidence=ISO

MGI|MGI:95490 Fbn2 "fibrillin 2" [Mus musculus (taxid:10090)]

 Score = 366 (133.9 bits), Expect = 8.8e-32, P = 8.8e-32
 Identities = 66/160 (41%), Positives = 90/160 (56%)

Query:     9 GYRLRVET--CEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGRHCIDINE 63
             GY LR +   C+D++EC E  + C  R   C N+ G+F CICP G A  PDG  C+D NE
Sbjct:  2275 GYALREDQKMCKDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMARRPDGEGCVDENE 2334

Query:    64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR-- 121
             C+   GICE+G+C+NI G   CEC EGF  S +G +C+D RQ +C+    +  C +    
Sbjct:  2335 CRTKPGICENGRCVNIIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTMCQMASSS 2394

Query:   122 KQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYP 161
             +  +T  ECCC  G+ WG  C  CP P + +      H P
Sbjct:  2395 RNLVTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGP 2434

GO:0001527 "microfibril" evidence=TAS

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=TAS

GO:0005576 "extracellular region" evidence=TAS

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IMP

GO:0030501 "positive regulation of bone mineralization" evidence=IMP

GO:0035108 "limb morphogenesis" evidence=IMP

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IMP

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IMP

GO:0060346 "bone trabecula formation" evidence=IMP

UNIPROTKB|P35556 FBN2 "Fibrillin-2" [Homo sapiens (taxid:9606)]

 Score = 366 (133.9 bits), Expect = 8.8e-32, P = 8.8e-32
 Identities = 66/160 (41%), Positives = 90/160 (56%)

Query:     9 GYRLRVET--CEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGRHCIDINE 63
             GY LR +   C+D++EC E  + C  R   C N+ G+F CICP G A  PDG  C+D NE
Sbjct:  2282 GYALREDQKMCKDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMARRPDGEGCVDENE 2341

Query:    64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR-- 121
             C+   GICE+G+C+NI G   CEC EGF  S +G +C+D RQ +C+    +  C +    
Sbjct:  2342 CRTKPGICENGRCVNIIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTICQMASSS 2401

Query:   122 KQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYP 161
             +  +T  ECCC  G+ WG  C  CP P + +      H P
Sbjct:  2402 RNLVTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGP 2441

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=TAS

GO:0009653 "anatomical structure morphogenesis" evidence=TAS

GO:0030501 "positive regulation of bone mineralization" evidence=ISS

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=ISS

GO:0045669 "positive regulation of osteoblast differentiation" evidence=ISS

GO:0060346 "bone trabecula formation" evidence=ISS

GO:0001527 "microfibril" evidence=TAS

UNIPROTKB|E1C3A6 FBN2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 363 (132.8 bits), Expect = 1.8e-31, P = 1.8e-31
 Identities = 65/160 (40%), Positives = 90/160 (56%)

Query:     9 GYRLRVET--CEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGRHCIDINE 63
             GY LR +   C+D++EC E  + C  R   C N+ G+F CICP G    PDG  C D NE
Sbjct:  2281 GYELRDDQKMCKDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMTRRPDGEGCTDENE 2340

Query:    64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR-- 121
             C+   GICE+G+C+N+ G   CEC EGF+ SP+G++C+D RQ  C+    +  C +    
Sbjct:  2341 CRTKPGICENGRCMNVIGSYRCECNEGFLSSPSGIECLDNRQGFCFAEVLQTMCQMASSS 2400

Query:   122 KQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYP 161
             +  +T  ECCC  G+ WG  C  CP P + +      H P
Sbjct:  2401 RNLVTKSECCCDGGRGWGNQCELCPLPGTTQYKKLCPHGP 2440

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0060346 "bone trabecula formation" evidence=IEA

UNIPROTKB|F1MTZ4 Bt.110891 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 361 (132.1 bits), Expect = 3.9e-31, P = 3.9e-31
 Identities = 65/160 (40%), Positives = 89/160 (55%)

Query:     9 GYRLRVET--CEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGRHCIDINE 63
             GY LR +   C+D++EC E  + C  R   C N+ G+F CICP G A  PDG  C+D NE
Sbjct:  3036 GYALREDQKMCKDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMARRPDGEGCVDENE 3095

Query:    64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR-- 121
             C+   GICE+G+C+N  G   CEC EGF  S +G +C+D RQ +C+    +  C +    
Sbjct:  3096 CRTKPGICENGRCVNTIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTMCQMASSS 3155

Query:   122 KQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYP 161
             +  +T  ECCC  G+ WG  C  CP P + +      H P
Sbjct:  3156 RNLVTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGP 3195

GO:0060346 "bone trabecula formation" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

UNIPROTKB|E2RS46 FBN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 357 (130.7 bits), Expect = 8.0e-31, P = 8.0e-31
 Identities = 64/160 (40%), Positives = 88/160 (55%)

Query:     9 GYRLRVET--CEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGRHCIDINE 63
             GY LR +   C+D++EC E  + C  R   C N+ G+F CICP G    PDG  C+D NE
Sbjct:  2291 GYALREDQKMCKDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMTRRPDGEGCVDENE 2350

Query:    64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR-- 121
             C+   GICE+G+C+N  G   CEC EGF  S +G +C+D RQ +C+    +  C +    
Sbjct:  2351 CRTKPGICENGRCVNTIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTMCQMASSS 2410

Query:   122 KQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYP 161
             +  +T  ECCC  G+ WG  C  CP P + +      H P
Sbjct:  2411 RNLVTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGP 2450

GO:0060346 "bone trabecula formation" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

UNIPROTKB|E1C5P6 FBN3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 350 (128.3 bits), Expect = 4.3e-30, P = 4.3e-30
 Identities = 64/161 (39%), Positives = 88/161 (54%)

Query:     8 TGYRLRVET--CEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGRHCIDIN 62
             +GY LR +   C D++EC E  + C  R   C N+ G+F CICP G    PDG  C D N
Sbjct:  2239 SGYALRDDRRMCRDLDECAEGLHDCESRGMLCKNLIGTFMCICPPGMQRRPDGEGCTDEN 2298

Query:    63 ECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTL--L 120
             EC+   GIC +G+CIN  G   C+C EGF +SP+G +CID RQ  C+    +  C +   
Sbjct:  2299 ECRTKPGICPNGRCINTVGSYRCDCNEGFEVSPSGTECIDTRQGFCFTEVLQTMCQMSST 2358

Query:   121 RKQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYP 161
              +  +T  ECCC+ G++WG  C  CP   + +      H P
Sbjct:  2359 NRNLVTKSECCCNSGRSWGPQCELCPLLGTAQYKKMCPHGP 2399

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	245
pfam12662	24	pfam12662, cEGF, Complement Clr-like EGF-like	3e-07
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	3e-06
pfam07645	42	pfam07645, EGF_CA, Calcium-binding EGF domain	2e-05
pfam07645	42	pfam07645, EGF_CA, Calcium-binding EGF domain	1e-04
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	1e-04
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	1e-04
pfam00683	42	pfam00683, TB, TB domain	3e-04
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	5e-04
cd01475	224	cd01475, vWA_Matrilin, VWA_Matrilin: In cartilagin	5e-04
pfam12662	24	pfam12662, cEGF, Complement Clr-like EGF-like	0.002
smart00181	35	smart00181, EGF, Epidermal growth factor-like doma	0.003

>gnl|CDD|221695 pfam12662, cEGF, Complement Clr-like EGF-like

 Score = 45.1 bits (108), Expect = 3e-07
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 40 SFRCICPYGYALAPDGRHCIDINE 63
          S+ C CP GY L+ DGR C DI+E
Sbjct: 1  SYTCSCPPGYQLSGDGRTCEDIDE 24

cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteristic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue. Length = 24

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 19 DINECLELSN-QCAFRCHNVPGSFRCICPYGYALAPDGRHCI 59
          DI+EC   +  Q    C N  GS+RC CP GY    DGR+C 
Sbjct: 1  DIDECASGNPCQNGGTCVNTVGSYRCECPPGYT---DGRNCE 39

Length = 39

>gnl|CDD|219496 pfam07645, EGF_CA, Calcium-binding EGF domain

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 19 DINECLELSNQC--AFRCHNVPGSFRCICPYGYALAPDGRHC 58
          D++EC + ++ C     C N  GSF C+CP GY    DG +C
Sbjct: 1  DVDECADGTHNCPANTVCVNTIGSFECVCPDGYENNEDGTNC 42

Length = 42

>gnl|CDD|219496 pfam07645, EGF_CA, Calcium-binding EGF domain

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 60  DINECKENEGIC-EDGKCINIAGGVTCECPEGFMLSPNGMKC 100
           D++EC +    C  +  C+N  G   C CP+G+  + +G  C
Sbjct: 1   DVDECADGTHNCPANTVCVNTIGSFECVCPDGYENNEDGTNC 42

Length = 42

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 5/42 (11%)

Query: 19 DINECLELSN-QCAFRCHNVPGSFRCICPYGYALAPDGRHCI 59
          DI+EC   +  Q    C N  GS+RC CP GY     GR+C 
Sbjct: 1  DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT----GRNCE 38

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 60 DINECKENEGICEDGKCINIAGGVTCECPEGFML 93
          DI+EC         G C+N  G   C CP G+  
Sbjct: 1  DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYTG 34

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|201391 pfam00683, TB, TB domain

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 115 GTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATF 156
           G C+      +T  ECCCS+G+AWG  C PCP   + E    
Sbjct: 1   GRCSNPLPGNVTKSECCCSLGRAWGTPCEPCPVQGTAEFRQL 42

This domain is also known as the 8 cysteine domain. This family includes the hybrid domains. This cysteine rich repeat is found in TGF binding protein and fibrillin. Length = 42

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 5/43 (11%)

Query: 60  DINECKENEGICEDG-KCINIAGGVTCECPEGFMLSPNGMKCI 101
           DI+EC      C++G  C+N  G   CECP G+    +G  C 
Sbjct: 1   DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT---DGRNCE 39

Length = 39

>gnl|CDD|238752 cd01475, vWA_Matrilin, VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 4   TMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGR 56
           T+     + + + C   + C  LS+ C   C + PGS+ C C  GYAL  D +
Sbjct: 171 TIEELTKKFQGKICVVPDLCATLSHVCQQVCISTPGSYLCACTEGYALLEDNK 223

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands. Length = 224

>gnl|CDD|221695 pfam12662, cEGF, Complement Clr-like EGF-like

 Score = 34.4 bits (80), Expect = 0.002
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 84  TCECPEGFMLSPNGMKCIDV 103
           TC CP G+ LS +G  C D+
Sbjct: 3   TCSCPPGYQLSGDGRTCEDI 22

cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteristic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue. Length = 24

>gnl|CDD|214544 smart00181, EGF, Epidermal growth factor-like domain

 Score = 34.4 bits (79), Expect = 0.003
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 63 ECKENEGICEDGKCINIAGGVTCECPEGFMLSPN 96
          EC    G C +G CIN  G  TC CP G+     
Sbjct: 1  ECASG-GPCSNGTCINTPGSYTCSCPPGYTGDKR 33

Length = 35

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	245
KOG1214|consensus	1289		99.63
KOG1219|consensus	4289		99.36
KOG4289|consensus	2531		99.23
KOG1219|consensus	4289		99.16
KOG1214|consensus	1289		99.07
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.77
KOG4289|consensus	2531		98.76
KOG4260|consensus	350		98.51
PF12662	24	cEGF: Complement Clr-like EGF-like	98.5
KOG1217|consensus	487		98.48
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.47
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	98.41
KOG4260|consensus	350		98.36
KOG1217|consensus	487		98.35
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	97.91
PF12662	24	cEGF: Complement Clr-like EGF-like	97.9
KOG1225|consensus	525		97.9
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.79
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	97.73
KOG1225|consensus	525		97.48
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.47
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.46
KOG0994|consensus	1758		97.35
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.2
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	96.78
KOG1226|consensus	783		96.67
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	96.43
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.36
smart00181	35	EGF Epidermal growth factor-like domain.	96.34
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	96.1
PF00683	42	TB: TB domain; InterPro: IPR002212 Transforming gr	95.96
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	95.83
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	95.78
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	95.49
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	95.47
KOG0994|consensus	1758		94.81
KOG1226|consensus	783		93.78
smart00181	35	EGF Epidermal growth factor-like domain.	93.74
cd00053	36	EGF Epidermal growth factor domain, found in epide	93.48
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	88.32
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	86.63
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	85.75
KOG1836|consensus	1705		85.38

>KOG1214|consensus

Probab=99.63  E-value=2.2e-15  Score=138.66  Aligned_cols=134  Identities=31%  Similarity=0.701  Sum_probs=114.1

Q ss_pred             CccccCCCCeeCCCccccccccCCCCCCC--CCeeeeCCCCceEeCCCCceeCCCCCeeEe------ccccccCCCCCC-
Q psy11798          2 STTMSVTGYRLRVETCEDINECLELSNQC--AFRCHNVPGSFRCICPYGYALAPDGRHCID------INECKENEGICE-   72 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~dideC~~~p~~c--~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~------~~eC~~~~~~C~-   72 (245)
                      .+|.|..||.++|++|.|++||++.+..|  +..|+|.+++|+|.|..||....++.+|+.      ++.|+...+.|. 
T Consensus       716 ~tcecs~g~~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i  795 (1289)
T KOG1214|consen  716 YTCECSSGYQGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAI  795 (1289)
T ss_pred             eEEEEeeccCCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCccccCc
Confidence            48999999999999999999999988888  689999999999999999999999999974      356776656675 


Q ss_pred             C--CeEeecC-CcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCc--cCCCCCceEecCCCc-cCCCCCc
Q psy11798         73 D--GKCINIA-GGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR--KQPITVKECCCSMGQ-AWGRYCL  143 (245)
Q Consensus        73 ~--~~C~~~~-g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~--~~~~~~~~C~C~~G~-~~G~~C~  143 (245)
                      .  ..|+... +.|.|.|.+||  ..+|..|.++++  |    ....|+..+  .|..+++.|.|.+|| ++|.+|-
T Consensus       796 ~g~a~c~~hGgs~y~C~CLPGf--sGDG~~c~dvDe--C----~psrChp~A~CyntpgsfsC~C~pGy~GDGf~CV  864 (1289)
T KOG1214|consen  796 AGQARCVHHGGSTYSCACLPGF--SGDGHQCTDVDE--C----SPSRCHPAATCYNTPGSFSCRCQPGYYGDGFQCV  864 (1289)
T ss_pred             CCceEEEecCCceEEEeecCCc--cCCccccccccc--c----CccccCCCceEecCCCcceeecccCccCCCceec
Confidence            3  3666654 47999999999  457889989988  9    567898887  899999999999998 6677774

>KOG1219|consensus

Probab=99.36  E-value=1.3e-12  Score=129.79  Aligned_cols=112  Identities=31%  Similarity=0.773  Sum_probs=96.8

Q ss_pred             cc-cccccCCCCCCCCCeeeeCC-CCceEeCCCCceeCCCCCeeE-eccccccCCCCCC-CCeEeecCCcceecCCCCce
Q psy11798         17 CE-DINECLELSNQCAFRCHNVP-GSFRCICPYGYALAPDGRHCI-DINECKENEGICE-DGKCINIAGGVTCECPEGFM   92 (245)
Q Consensus        17 C~-dideC~~~p~~c~~~C~n~~-gsy~C~C~~Gy~~~~~g~~C~-~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~   92 (245)
                      |. -.+.|..+||+.+|+|...+ ++|.|.|++.|.    |++|+ ++..|..+|  |. +|+|+...+.|.|.|+.|| 
T Consensus      3860 C~l~~d~C~~npCqhgG~C~~~~~ggy~CkCpsqys----G~~CEi~~epC~snP--C~~GgtCip~~n~f~CnC~~gy- 3932 (4289)
T KOG1219|consen 3860 CSLLTDPCNDNPCQHGGTCISQPKGGYKCKCPSQYS----GNHCEIDLEPCASNP--CLTGGTCIPFYNGFLCNCPNGY- 3932 (4289)
T ss_pred             ccccccccccCcccCCCEecCCCCCceEEeCccccc----CcccccccccccCCC--CCCCCEEEecCCCeeEeCCCCc-
Confidence            54 23889999999999999887 689999999999    99997 889999888  98 6799999999999999999 


Q ss_pred             eCCCCCceeecCcccccCCCcccCccCCc--cCCCCCceEecCCCccCCCCCc
Q psy11798         93 LSPNGMKCIDVRQDVCYDSYQEGTCTLLR--KQPITVKECCCSMGQAWGRYCL  143 (245)
Q Consensus        93 l~~~g~~C~~~~~~~C~~~~~~~~C~~~~--~~~~~~~~C~C~~G~~~G~~C~  143 (245)
                         +|..|+.....+|    ..+.|.+++  .|..|+|.|.|.+|+. |..|.
T Consensus      3933 ---TG~~Ce~~Gi~eC----s~n~C~~gg~C~n~~gsf~CncT~g~~-gr~c~ 3977 (4289)
T KOG1219|consen 3933 ---TGKRCEARGISEC----SKNVCGTGGQCINIPGSFHCNCTPGIL-GRTCC 3977 (4289)
T ss_pred             ---cCceeeccccccc----ccccccCCceeeccCCceEeccChhHh-cccCc
Confidence               8999964333348    678898887  8999999999999998 87773

>KOG4289|consensus

Probab=99.23  E-value=3e-11  Score=116.67  Aligned_cols=80  Identities=33%  Similarity=0.866  Sum_probs=69.3

Q ss_pred             ccccCCCCeeCCCccc-cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE-ec--cccccCCCCCC-CCeEe
Q psy11798          3 TTMSVTGYRLRVETCE-DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI-DI--NECKENEGICE-DGKCI   77 (245)
Q Consensus         3 ~C~C~~G~~~~g~~C~-dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-~~--~eC~~~~~~C~-~~~C~   77 (245)
                      .|.|+|||+  |..|+ +||+|-++||.++++|+...|+|+|.|.+||+    |++|+ +.  ..|.  |+.|. .++|+
T Consensus      1223 rCrCPpGFT--gd~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~t----GehCEvs~~agrCv--pGvC~nggtC~ 1294 (2531)
T KOG4289|consen 1223 RCRCPPGFT--GDYCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGFT----GEHCEVSARAGRCV--PGVCKNGGTCV 1294 (2531)
T ss_pred             eEeCCCCCC--cccccchhHhhhcCCCCCCCceEEecCceeEEecCCcc----ccceeeecccCccc--cceecCCCEEe
Confidence            499999999  88999 99999999998899999999999999999999    99997 33  2354  57798 56999


Q ss_pred             ecC-CcceecCCCC
Q psy11798         78 NIA-GGVTCECPEG   90 (245)
Q Consensus        78 ~~~-g~~~C~C~~g   90 (245)
                      +.. |.|.|.|+.|
T Consensus      1295 ~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1295 NLLNGGFCCHCPYG 1308 (2531)
T ss_pred             ecCCCceeccCCCc
Confidence            874 6789999877

>KOG1219|consensus

Probab=99.16  E-value=3.8e-11  Score=119.79  Aligned_cols=87  Identities=34%  Similarity=0.804  Sum_probs=79.2

Q ss_pred             CccccCCCCeeCCCccc-cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE-e-ccccccCCCCCC-CCeEe
Q psy11798          2 STTMSVTGYRLRVETCE-DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI-D-INECKENEGICE-DGKCI   77 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~-dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-~-~~eC~~~~~~C~-~~~C~   77 (245)
                      +.|.|++-|.  |++|| +++.|.++||..+++|....++|.|.|+.||+    |.+|+ + ++||+.++  |+ .|.|+
T Consensus      3886 y~CkCpsqys--G~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyT----G~~Ce~~Gi~eCs~n~--C~~gg~C~ 3957 (4289)
T KOG1219|consen 3886 YKCKCPSQYS--GNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYT----GKRCEARGISECSKNV--CGTGGQCI 3957 (4289)
T ss_pred             eEEeCccccc--CcccccccccccCCCCCCCCEEEecCCCeeEeCCCCcc----Cceeeccccccccccc--ccCCceee
Confidence            4699999999  99999 99999999988899999999999999999999    99998 4 89999766  99 56999


Q ss_pred             ecCCcceecCCCCceeCCCCCce
Q psy11798         78 NIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        78 ~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      |..|+|.|.|.+||    -|+.|
T Consensus      3958 n~~gsf~CncT~g~----~gr~c 3976 (4289)
T KOG1219|consen 3958 NIPGSFHCNCTPGI----LGRTC 3976 (4289)
T ss_pred             ccCCceEeccChhH----hcccC
Confidence            99999999999999    45555

>KOG1214|consensus

Probab=99.07  E-value=3.9e-10  Score=104.66  Aligned_cols=108  Identities=31%  Similarity=0.751  Sum_probs=82.6

Q ss_pred             CCeeeeCC-CCceEeCCCCceeCCCCCeeEeccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCceeecCc---
Q psy11798         31 AFRCHNVP-GSFRCICPYGYALAPDGRHCIDINECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQ---  105 (245)
Q Consensus        31 ~~~C~n~~-gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~---  105 (245)
                      ...|.... -.|+|.|..||.  .+++.|.|++||+..++.|+ +..|++..++|+|.|..+|.+..++..|..+..   
T Consensus       705 ~a~C~pg~~~~~tcecs~g~~--gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap  782 (1289)
T KOG1214|consen  705 TARCHPGTGVDYTCECSSGYQ--GDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAP  782 (1289)
T ss_pred             CccccCCCCcceEEEEeeccC--CCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCC
Confidence            45566554 379999999998  45889999999998888899 789999999999999999999999999965422   


Q ss_pred             -ccccCCCcccCccCCc-----cCCCCCceEecCCCc-cCCCCC
Q psy11798        106 -DVCYDSYQEGTCTLLR-----KQPITVKECCCSMGQ-AWGRYC  142 (245)
Q Consensus       106 -~~C~~~~~~~~C~~~~-----~~~~~~~~C~C~~G~-~~G~~C  142 (245)
                       ..|..  +.+.|....     ....+.|.|.|.+|| ++|..|
T Consensus       783 ~n~Ce~--g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~~c  824 (1289)
T KOG1214|consen  783 ANPCED--GSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGHQC  824 (1289)
T ss_pred             CCcccc--CccccCcCCceEEEecCCceEEEeecCCccCCcccc
Confidence             23643  345565444     234556999999999 445544

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.77  E-value=9.3e-09  Score=62.06  Aligned_cols=40  Identities=48%  Similarity=1.032  Sum_probs=34.6

Q ss_pred             cccccCCCCCCC--CCeeeeCCCCceEeCCCCceeCCCCCee
Q psy11798         19 DINECLELSNQC--AFRCHNVPGSFRCICPYGYALAPDGRHC   58 (245)
Q Consensus        19 dideC~~~p~~c--~~~C~n~~gsy~C~C~~Gy~~~~~g~~C   58 (245)
                      |||||...+..|  .+.|+|+.|+|.|.|++||....++..|
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~~~~C   42 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDDGTTC   42 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTTSSEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCCCCcC
Confidence            799999887777  6999999999999999999977666554

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG4289|consensus

Probab=98.76  E-value=1.1e-08  Score=99.48  Aligned_cols=96  Identities=31%  Similarity=0.696  Sum_probs=78.6

Q ss_pred             eeCCCCceEeCCCCceeCCCCCeeE-eccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCcee-ecCcccccCC
Q psy11798         35 HNVPGSFRCICPYGYALAPDGRHCI-DINECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCI-DVRQDVCYDS  111 (245)
Q Consensus        35 ~n~~gsy~C~C~~Gy~~~~~g~~C~-~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~-~~~~~~C~~~  111 (245)
                      ++..++++|.||+||+    |..|+ ++|+|-..|  |. +++|....|.|.|.|.+||    .|..|+ +.....|   
T Consensus      1216 i~pvnglrCrCPpGFT----gd~CeTeiDlCYs~p--C~nng~C~srEggYtCeCrpg~----tGehCEvs~~agrC--- 1282 (2531)
T KOG4289|consen 1216 IHPVNGLRCRCPPGFT----GDYCETEIDLCYSGP--CGNNGRCRSREGGYTCECRPGF----TGEHCEVSARAGRC--- 1282 (2531)
T ss_pred             ccccCceeEeCCCCCC----cccccchhHhhhcCC--CCCCCceEEecCceeEEecCCc----cccceeeecccCcc---
Confidence            3456789999999999    88897 899998877  98 7899999999999999999    799994 4445557   


Q ss_pred             CcccCccCCc---cCCCCCceEecCCCccCCCCCcc
Q psy11798        112 YQEGTCTLLR---KQPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       112 ~~~~~C~~~~---~~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                       .++.|.+++   ....+.+.|.|+.|.-.+..|+.
T Consensus      1283 -vpGvC~nggtC~~~~nggf~c~Cp~ge~e~prC~v 1317 (2531)
T KOG4289|consen 1283 -VPGVCKNGGTCVNLLNGGFCCHCPYGEFEDPRCEV 1317 (2531)
T ss_pred             -ccceecCCCEEeecCCCceeccCCCcccCCCceEE
Confidence             567788777   34567799999999654788874

>KOG4260|consensus

Probab=98.51  E-value=8.3e-08  Score=79.08  Aligned_cols=119  Identities=29%  Similarity=0.580  Sum_probs=76.4

Q ss_pred             CccccCCCCeeCCCcccc--c-------cc----cCCCCCCCCCeeeeCCCCceE-eCCCCceeCCCCCeeEeccccccC
Q psy11798          2 STTMSVTGYRLRVETCED--I-------NE----CLELSNQCAFRCHNVPGSFRC-ICPYGYALAPDGRHCIDINECKEN   67 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~d--i-------de----C~~~p~~c~~~C~n~~gsy~C-~C~~Gy~~~~~g~~C~~~~eC~~~   67 (245)
                      ..|.|.+||.  |..|.+  +       |+    |..=.-.|.++|.. .++-.| .|..||.+...  .|+|||||...
T Consensus       168 GkCkC~~GY~--Gp~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~~~Csg-~~~k~C~kCkkGW~lde~--gCvDvnEC~~e  242 (350)
T KOG4260|consen  168 GKCKCETGYT--GPLCRYCGIEYFESSRNEQHLVCTACHEGCLGVCSG-ESSKGCSKCKKGWKLDEE--GCVDVNECQNE  242 (350)
T ss_pred             CcccccCCCC--CccccccchHHHHhhcccccchhhhhhhhhhcccCC-CCCCChhhhcccceeccc--ccccHHHHhcC
Confidence            4799999999  766631  1       11    11000113334432 344556 79999998744  49999999987


Q ss_pred             CCCCC-CCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCcccCccC---CccCCCCCceEecCCCcc
Q psy11798         68 EGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTL---LRKQPITVKECCCSMGQA  137 (245)
Q Consensus        68 ~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~---~~~~~~~~~~C~C~~G~~  137 (245)
                      +..|. +..|+|+.|+|.|.+.+||..        ++++  |..  ....|..   ...|..+.|+|.|..|+-
T Consensus       243 p~~c~~~qfCvNteGSf~C~dk~Gy~~--------g~d~--C~~--~~d~~~~kn~~c~ni~~~~r~v~f~~~~  304 (350)
T KOG4260|consen  243 PAPCKAHQFCVNTEGSFKCEDKEGYKK--------GVDE--CQF--CADVCASKNRPCMNIDGQYRCVCFSGLI  304 (350)
T ss_pred             CCCCChhheeecCCCceEecccccccC--------ChHH--hhh--hhhhcccCCCCcccCCccEEEEecccce
Confidence            77788 569999999999999999942        1222  311  1122221   115678889999988763

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=98.50  E-value=6.8e-08  Score=50.34  Aligned_cols=24  Identities=63%  Similarity=1.370  Sum_probs=22.8

Q ss_pred             CceEeCCCCceeCCCCCeeEeccc
Q psy11798         40 SFRCICPYGYALAPDGRHCIDINE   63 (245)
Q Consensus        40 sy~C~C~~Gy~~~~~g~~C~~~~e   63 (245)
                      ||+|.|++||.+.++++.|+||||
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            699999999999999999999987

>KOG1217|consensus

Probab=98.48  E-value=1.3e-06  Score=79.30  Aligned_cols=132  Identities=34%  Similarity=0.747  Sum_probs=89.0

Q ss_pred             CccccCCCCeeCCCccc-cccccCCCCCCC--CCeeeeCCCCceEeCCCCceeCCCCC-----eeEe-----------cc
Q psy11798          2 STTMSVTGYRLRVETCE-DINECLELSNQC--AFRCHNVPGSFRCICPYGYALAPDGR-----HCID-----------IN   62 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~-dideC~~~p~~c--~~~C~n~~gsy~C~C~~Gy~~~~~g~-----~C~~-----------~~   62 (245)
                      ..|.|.+||.  +..|. +.++|...+..|  ++.|.+..++|.|.|++||.......     .|.+           .+
T Consensus       152 ~~c~C~~g~~--~~~~~~~~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~  229 (487)
T KOG1217|consen  152 FRCSCTEGYE--GEPCETDLDECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGP  229 (487)
T ss_pred             eeeeeCCCcc--cccccccccccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCC
Confidence            4689999999  77777 447898555434  78999999999999999998443221     1321           12


Q ss_pred             ccccCCCCCC-C-CeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCc--cCCCCCceEecCCCccC
Q psy11798         63 ECKENEGICE-D-GKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR--KQPITVKECCCSMGQAW  138 (245)
Q Consensus        63 eC~~~~~~C~-~-~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~--~~~~~~~~C~C~~G~~~  138 (245)
                      .|......+. . +.|.+..++|.|.|++||..... ..+.++++  |..  ... |.+..  .+..+.|.|.|++||. 
T Consensus       230 ~c~~~~~~~~~~~~~c~~~~~~~~C~~~~g~~~~~~-~~~~~~~~--C~~--~~~-c~~~~~C~~~~~~~~C~C~~g~~-  302 (487)
T KOG1217|consen  230 ECEVSIVECASGDGTCVNTVGSYTCRCPEGYTGDAC-VTCVDVDS--CAL--IAS-CPNGGTCVNVPGSYRCTCPPGFT-  302 (487)
T ss_pred             CcccccccccCCCCcccccCCceeeeCCCCcccccc-ceeeeccc--cCC--CCc-cCCCCeeecCCCcceeeCCCCCC-
Confidence            3332222232 1 68899999999999999954321 34556666  732  222 66544  6666669999999998 


Q ss_pred             CCCC
Q psy11798        139 GRYC  142 (245)
Q Consensus       139 G~~C  142 (245)
                      |..|
T Consensus       303 g~~~  306 (487)
T KOG1217|consen  303 GRLC  306 (487)
T ss_pred             CCCC
Confidence            7766

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.47  E-value=2e-07  Score=56.18  Aligned_cols=40  Identities=40%  Similarity=1.020  Sum_probs=33.8

Q ss_pred             eccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCc
Q psy11798         60 DINECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMK   99 (245)
Q Consensus        60 ~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~   99 (245)
                      |||||...++.|. ++.|+|+.|+|.|.|++||.....+..
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~~~~   41 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDDGTT   41 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTTSSE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCCCCc
Confidence            6899998778898 679999999999999999975555444

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=98.41  E-value=2.6e-07  Score=53.39  Aligned_cols=35  Identities=51%  Similarity=1.101  Sum_probs=28.7

Q ss_pred             CCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCee
Q psy11798         24 LELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHC   58 (245)
Q Consensus        24 ~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C   58 (245)
                      ..+...|.+.|++.+++|+|.|++||.|.+|+++|
T Consensus         2 ~~~NGgC~h~C~~~~g~~~C~C~~Gy~L~~D~~tC   36 (36)
T PF14670_consen    2 SVNNGGCSHICVNTPGSYRCSCPPGYKLAEDGRTC   36 (36)
T ss_dssp             TTGGGGSSSEEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred             CCCCCCcCCCCccCCCceEeECCCCCEECcCCCCC
Confidence            34456789999999999999999999999999876

...

>KOG4260|consensus

Probab=98.36  E-value=2e-07  Score=76.83  Aligned_cols=79  Identities=34%  Similarity=0.765  Sum_probs=64.2

Q ss_pred             ccCCCCeeCCCccccccccCCCCCCC--CCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCC--CCeEeecC
Q psy11798          5 MSVTGYRLRVETCEDINECLELSNQC--AFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE--DGKCINIA   80 (245)
Q Consensus         5 ~C~~G~~~~g~~C~dideC~~~p~~c--~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~--~~~C~~~~   80 (245)
                      .|..||.++-.-|.|||||...|..|  +..|+|+.|||.|.+++||..        ++|+|..-..+|.  +..|.|+.
T Consensus       221 kCkkGW~lde~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~--------g~d~C~~~~d~~~~kn~~c~ni~  292 (350)
T KOG4260|consen  221 KCKKGWKLDEEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK--------GVDECQFCADVCASKNRPCMNID  292 (350)
T ss_pred             hhcccceecccccccHHHHhcCCCCCChhheeecCCCceEecccccccC--------ChHHhhhhhhhcccCCCCcccCC
Confidence            48889999877899999999877777  788999999999999999972        3566654222343  45899999


Q ss_pred             CcceecCCCCc
Q psy11798         81 GGVTCECPEGF   91 (245)
Q Consensus        81 g~~~C~C~~g~   91 (245)
                      +.|+|+|..++
T Consensus       293 ~~~r~v~f~~~  303 (350)
T KOG4260|consen  293 GQYRCVCFSGL  303 (350)
T ss_pred             ccEEEEecccc
Confidence            99999998887

>KOG1217|consensus

Probab=98.35  E-value=3.9e-06  Score=76.12  Aligned_cols=106  Identities=32%  Similarity=0.746  Sum_probs=75.4

Q ss_pred             CeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCceeecCcccccC
Q psy11798         32 FRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYD  110 (245)
Q Consensus        32 ~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~  110 (245)
                      ++|++..++|.|.|++||.+... ..|.++++|..... |. ++.|++..+.|.|.|++||..... ..+.+..+  |..
T Consensus       243 ~~c~~~~~~~~C~~~~g~~~~~~-~~~~~~~~C~~~~~-c~~~~~C~~~~~~~~C~C~~g~~g~~~-~~~~~~~~--C~~  317 (487)
T KOG1217|consen  243 GTCVNTVGSYTCRCPEGYTGDAC-VTCVDVDSCALIAS-CPNGGTCVNVPGSYRCTCPPGFTGRLC-TECVDVDE--CSP  317 (487)
T ss_pred             CcccccCCceeeeCCCCcccccc-ceeeeccccCCCCc-cCCCCeeecCCCcceeeCCCCCCCCCC-cccccccc--ccc
Confidence            78999999999999999995431 35789999987654 77 579999999999999999943222 12223333  643


Q ss_pred             CCcccCccCCc----cCCCCCceEecCCCccCCCCCc
Q psy11798        111 SYQEGTCTLLR----KQPITVKECCCSMGQAWGRYCL  143 (245)
Q Consensus       111 ~~~~~~C~~~~----~~~~~~~~C~C~~G~~~G~~C~  143 (245)
                      ......|.++.    ....+.+.|.|..|+. |..|+
T Consensus       318 ~~~~~~c~~g~~C~~~~~~~~~~C~c~~~~~-g~~C~  353 (487)
T KOG1217|consen  318 RNAGGPCANGGTCNTLGSFGGFRCACGPGFT-GRRCE  353 (487)
T ss_pred             cccCCcCCCCcccccCCCCCCCCcCCCCCCC-CCccc
Confidence            23444566553    4455568899999966 88887

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=97.91  E-value=9.8e-06  Score=46.82  Aligned_cols=34  Identities=38%  Similarity=1.005  Sum_probs=27.5

Q ss_pred             cCCCCCCCCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         66 ENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        66 ~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      ..++.|.+ .|+++.++|.|.|++||.|..+++.|
T Consensus         3 ~~NGgC~h-~C~~~~g~~~C~C~~Gy~L~~D~~tC   36 (36)
T PF14670_consen    3 VNNGGCSH-ICVNTPGSYRCSCPPGYKLAEDGRTC   36 (36)
T ss_dssp             TGGGGSSS-EEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred             CCCCCcCC-CCccCCCceEeECCCCCEECcCCCCC
Confidence            34566887 99999999999999999999888765

...

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.90  E-value=7.2e-06  Score=42.72  Aligned_cols=24  Identities=46%  Similarity=1.135  Sum_probs=22.2

Q ss_pred             cceecCCCCceeCCCCCceeecCc
Q psy11798         82 GVTCECPEGFMLSPNGMKCIDVRQ  105 (245)
Q Consensus        82 ~~~C~C~~g~~l~~~g~~C~~~~~  105 (245)
                      +|.|.|++||.+.++++.|+||+|
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            589999999999999999999986

>KOG1225|consensus

Probab=97.90  E-value=7.5e-05  Score=68.35  Aligned_cols=128  Identities=27%  Similarity=0.597  Sum_probs=75.4

Q ss_pred             ccccCCCCeeCCCccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCC-CCeEeecCC
Q psy11798          3 TTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE-DGKCINIAG   81 (245)
Q Consensus         3 ~C~C~~G~~~~g~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~-~~~C~~~~g   81 (245)
                      .|.|+.||+  +..|+. --|..+ +.+.+.|++.    +|.|++||+    |..|.. -.|..   .|. ++.+++  +
T Consensus       235 ic~c~~~~~--g~~c~~-~~C~~~-c~~~g~c~~G----~CIC~~Gf~----G~dC~e-~~Cp~---~cs~~g~~~~--g  296 (525)
T KOG1225|consen  235 ICECPEGYF--GPLCST-IYCPGG-CTGRGQCVEG----RCICPPGFT----GDDCDE-LVCPV---DCSGGGVCVD--G  296 (525)
T ss_pred             eeecCCcee--CCcccc-ccCCCC-CcccceEeCC----eEeCCCCCc----CCCCCc-ccCCc---ccCCCceecC--C
Confidence            477888888  666652 223221 1223455543    688999998    777743 23432   154 344443  2


Q ss_pred             cceecCCCCceeCCCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCccCCCCCcc--CCCCCCCCCceeccC
Q psy11798         82 GVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYCLP--CPSPNSGEPATFWSH  159 (245)
Q Consensus        82 ~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~--C~~~~~~~~~~~c~~  159 (245)
                        .|.|+++|    .|+.|. +..  |     ...|.....-.  .-+|.|.+||. |..|+.  |+..+.+.-.+.|..
T Consensus       297 --~CiC~~g~----~G~dCs-~~~--c-----padC~g~G~Ci--~G~C~C~~Gy~-G~~C~~~~C~~~g~cv~gC~C~~  359 (525)
T KOG1225|consen  297 --ECICNPGY----SGKDCS-IRR--C-----PADCSGHGKCI--DGECLCDEGYT-GELCIQRACSGGGQCVNGCKCKK  359 (525)
T ss_pred             --EeecCCCc----cccccc-ccc--C-----CccCCCCCccc--CCceEeCCCCc-CCcccccccCCCceeccCceecc
Confidence              78899999    677773 333  4     23344333111  34888999988 888875  666666655566766


Q ss_pred             CCCCee
Q psy11798        160 YPKGFF  165 (245)
Q Consensus       160 ~~~g~~  165 (245)
                      +++|..
T Consensus       360 Gw~G~d  365 (525)
T KOG1225|consen  360 GWRGPD  365 (525)
T ss_pred             CccCCC
Confidence            555544

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.79  E-value=2.8e-05  Score=45.46  Aligned_cols=37  Identities=51%  Similarity=1.037  Sum_probs=29.2

Q ss_pred             cccccCC-CCCCCCCeeeeCCCCceEeCCCCceeCCCCCee
Q psy11798         19 DINECLE-LSNQCAFRCHNVPGSFRCICPYGYALAPDGRHC   58 (245)
Q Consensus        19 dideC~~-~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C   58 (245)
                      ++|+|.. .++..++.|++..++|.|.|++||.   +++.|
T Consensus         1 d~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~---~g~~C   38 (39)
T smart00179        1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYT---DGRNC   38 (39)
T ss_pred             CcccCcCCCCcCCCCEeECCCCCeEeECCCCCc---cCCcC
Confidence            4788876 5655577999999999999999997   35444

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=97.73  E-value=4.9e-05  Score=59.76  Aligned_cols=124  Identities=30%  Similarity=0.648  Sum_probs=74.2

Q ss_pred             ccccCCCCee-CCCccccccccCCCCC---CC--CCeeeeCC-----CCceEeCCCCceeCCCCCeeEeccccccCCCCC
Q psy11798          3 TTMSVTGYRL-RVETCEDINECLELSN---QC--AFRCHNVP-----GSFRCICPYGYALAPDGRHCIDINECKENEGIC   71 (245)
Q Consensus         3 ~C~C~~G~~~-~g~~C~dideC~~~p~---~c--~~~C~n~~-----gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C   71 (245)
                      .|.|.+||.+ +...|+...+|.....   .|  -+.|.+..     ..|.|.|.+||.+..+  .|. .+.|....  |
T Consensus        21 EC~Cnegfvl~~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~--vCv-p~~C~~~~--C   95 (197)
T PF06247_consen   21 ECKCNEGFVLKNENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQG--VCV-PNKCNNKD--C   95 (197)
T ss_dssp             EEEESTTEEEEETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSS--SEE-EGGGSS-----
T ss_pred             EEEcCCCcEEccccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCC--eEc-hhhcCcee--c
Confidence            5999999999 7789998888976211   34  58898876     4799999999998765  365 35676544  8


Q ss_pred             CCCeEeecC---CcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCc--cCCCCCceEecCCCcc
Q psy11798         72 EDGKCINIA---GGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR--KQPITVKECCCSMGQA  137 (245)
Q Consensus        72 ~~~~C~~~~---g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~--~~~~~~~~C~C~~G~~  137 (245)
                      +.|.|+-.+   ....|+|.-|+. ..+...|....+-.|     .-.|....  ....+-|+|.|..|+.
T Consensus        96 g~GKCI~d~~~~~~~~CSC~IGkV-~~dn~kCtk~G~T~C-----~LKCk~nE~CK~~~~~Y~C~~~~~~~  160 (197)
T PF06247_consen   96 GSGKCILDPDNPNNPTCSCNIGKV-PDDNKKCTKTGETKC-----SLKCKENEECKLVDGYYKCVCKEGFP  160 (197)
T ss_dssp             TTEEEEEEEGGGSEEEEEE-TEEE-TTTTTESEEEE-------------TTTEEEEEETTEEEEEE-TT-E
T ss_pred             CCCeEEecCCCCCCceeEeeeceE-eccCCcccCCCccce-----eeecCCCcceeeeCcEEEeecCCCCC
Confidence            878997543   344899999987 446667755444445     12342222  4456679999999885

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>KOG1225|consensus

Probab=97.48  E-value=0.00029  Score=64.61  Aligned_cols=100  Identities=29%  Similarity=0.678  Sum_probs=64.5

Q ss_pred             CccccCCCCeeCCCccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCC-CCeEeecC
Q psy11798          2 STTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE-DGKCINIA   80 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~-~~~C~~~~   80 (245)
                      ..|+|++||.  |..|..+ .|... +.-++.+++.    .|.|++||+    |+.|.. ..|.   ..|. +|.|++  
T Consensus       265 G~CIC~~Gf~--G~dC~e~-~Cp~~-cs~~g~~~~g----~CiC~~g~~----G~dCs~-~~cp---adC~g~G~Ci~--  326 (525)
T KOG1225|consen  265 GRCICPPGFT--GDDCDEL-VCPVD-CSGGGVCVDG----ECICNPGYS----GKDCSI-RRCP---ADCSGHGKCID--  326 (525)
T ss_pred             CeEeCCCCCc--CCCCCcc-cCCcc-cCCCceecCC----EeecCCCcc----cccccc-ccCC---ccCCCCCcccC--
Confidence            4799999999  8888642 25332 2223444432    899999999    888853 2243   3377 778982  


Q ss_pred             CcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCccCCCC
Q psy11798         81 GGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRY  141 (245)
Q Consensus        81 g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~G~~  141 (245)
                        -.|.|.+||    .|..|...  . |         .+...-..  - |.|..||. |.+
T Consensus       327 --G~C~C~~Gy----~G~~C~~~--~-C---------~~~g~cv~--g-C~C~~Gw~-G~d  365 (525)
T KOG1225|consen  327 --GECLCDEGY----TGELCIQR--A-C---------SGGGQCVN--G-CKCKKGWR-GPD  365 (525)
T ss_pred             --CceEeCCCC----cCCccccc--c-c---------CCCceecc--C-ceeccCcc-CCC
Confidence              379999999    67777422  1 4         33221111  2 88999987 665

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.47  E-value=0.00015  Score=41.82  Aligned_cols=36  Identities=50%  Similarity=1.030  Sum_probs=28.6

Q ss_pred             cccccCC-CCCCCCCeeeeCCCCceEeCCCCceeCCCCCee
Q psy11798         19 DINECLE-LSNQCAFRCHNVPGSFRCICPYGYALAPDGRHC   58 (245)
Q Consensus        19 dideC~~-~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C   58 (245)
                      ++++|.. .++..++.|++..++|.|.|++||.    ++.|
T Consensus         1 ~~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~----g~~C   37 (38)
T cd00054           1 DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT----GRNC   37 (38)
T ss_pred             CcccCCCCCCcCCCCEeECCCCCeEeECCCCCc----CCcC
Confidence            3677876 5555578999999999999999998    6555

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.46  E-value=8.2e-05  Score=41.86  Aligned_cols=28  Identities=36%  Similarity=0.878  Sum_probs=24.8

Q ss_pred             cCCCCCCCCCeeeeCC-CCceEeCCCCce
Q psy11798         23 CLELSNQCAFRCHNVP-GSFRCICPYGYA   50 (245)
Q Consensus        23 C~~~p~~c~~~C~n~~-gsy~C~C~~Gy~   50 (245)
                      |.++|+.++++|++.. ++|.|.|++||+
T Consensus         1 C~~~~C~n~g~C~~~~~~~y~C~C~~G~~   29 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGGYTCECPPGYT   29 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSEEEEEEBTTEE
T ss_pred             CCCCcCCCCeEEEeCCCCCEEeECCCCCc
Confidence            4566777799999999 999999999998

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG0994|consensus

Probab=97.35  E-value=0.0013  Score=64.35  Aligned_cols=97  Identities=30%  Similarity=0.706  Sum_probs=54.2

Q ss_pred             eCCCCceeCCCCCeeE---eccccccCCCCCCCCeEeecCCccee-cCCCCceeCC---CCCceeecCcccccCCCccc-
Q psy11798         44 ICPYGYALAPDGRHCI---DINECKENEGICEDGKCINIAGGVTC-ECPEGFMLSP---NGMKCIDVRQDVCYDSYQEG-  115 (245)
Q Consensus        44 ~C~~Gy~~~~~g~~C~---~~~eC~~~~~~C~~~~C~~~~g~~~C-~C~~g~~l~~---~g~~C~~~~~~~C~~~~~~~-  115 (245)
                      .|.+||-..|+=+.|+   -.++|....+.|.  .|.+..+.+.| .|..||...+   .+..|   +..+|....+++ 
T Consensus       845 qCqpG~WgFPeCr~CqCNgHA~~Cd~~tGaCi--~CqD~T~G~~CdrCl~GyyGdP~lg~g~~C---rPCpCP~gp~Sg~  919 (1758)
T KOG0994|consen  845 QCQPGYWGFPECRPCQCNGHADTCDPITGACI--DCQDSTTGHSCDRCLDGYYGDPRLGSGIGC---RPCPCPDGPASGR  919 (1758)
T ss_pred             ccCCCccCCCcCccccccCcccccCccccccc--cccccccccchhhhhccccCCcccCCCCCC---CCCCCCCCCccch
Confidence            4555555444444443   1345554444454  46666677777 5888885432   23334   233354433322 


Q ss_pred             ----CccCCccCCCCCceEecCCCccCCCCCccCCCC
Q psy11798        116 ----TCTLLRKQPITVKECCCSMGQAWGRYCLPCPSP  148 (245)
Q Consensus       116 ----~C~~~~~~~~~~~~C~C~~G~~~G~~C~~C~~~  148 (245)
                          .|..  .+....-.|.|.+||. |..|+.|..+
T Consensus       920 ~~A~sC~~--d~~t~~ivC~C~~GY~-G~RCe~CA~~  953 (1758)
T KOG0994|consen  920 QHADSCYL--DTRTQQIVCHCQEGYS-GSRCEICADN  953 (1758)
T ss_pred             hccccccc--cccccceeeecccCcc-ccchhhhccc
Confidence                1221  2333456899999999 9999998654

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.20  E-value=0.0003  Score=40.66  Aligned_cols=27  Identities=37%  Similarity=0.807  Sum_probs=20.4

Q ss_pred             CCCCCC--CCeeeeCCCCceEeCCCCcee
Q psy11798         25 ELSNQC--AFRCHNVPGSFRCICPYGYAL   51 (245)
Q Consensus        25 ~~p~~c--~~~C~n~~gsy~C~C~~Gy~~   51 (245)
                      .++..|  .+.|.++.++|.|.|++||..
T Consensus         3 ~~~~~C~~nA~C~~~~~~~~C~C~~Gy~G   31 (36)
T PF12947_consen    3 ENNGGCHPNATCTNTGGSYTCTCKPGYEG   31 (36)
T ss_dssp             TGGGGS-TTCEEEE-TTSEEEEE-CEEEC
T ss_pred             CCCCCCCCCcEeecCCCCEEeECCCCCcc
Confidence            334455  689999999999999999993

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=96.78  E-value=0.0016  Score=37.77  Aligned_cols=32  Identities=44%  Similarity=1.169  Sum_probs=25.2

Q ss_pred             eccccccCCCCCC-CCeEeecCCcceecCCCCce
Q psy11798         60 DINECKENEGICE-DGKCINIAGGVTCECPEGFM   92 (245)
Q Consensus        60 ~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~   92 (245)
                      ++++|... ..|. ++.|+++.++|.|.|++||.
T Consensus         1 d~~~C~~~-~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             CcccCcCC-CCcCCCCEeECCCCCeEeECCCCCc
Confidence            36778752 3487 45999999999999999994

>KOG1226|consensus

Probab=96.67  E-value=0.0093  Score=56.39  Aligned_cols=130  Identities=25%  Similarity=0.566  Sum_probs=69.6

Q ss_pred             CccccCCCCeeCCCccc-cc---------cccCCCCC--CC--CCeeeeCCCCceEeCCCCceeCCCCCeeE-ecccccc
Q psy11798          2 STTMSVTGYRLRVETCE-DI---------NECLELSN--QC--AFRCHNVPGSFRCICPYGYALAPDGRHCI-DINECKE   66 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~-di---------deC~~~p~--~c--~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-~~~eC~~   66 (245)
                      +.|.|.+||.  |+.|+ ..         +.|.....  .|  .+.|.-.    +|.|.+.......|+.|+ |--.|..
T Consensus       478 G~C~C~~G~~--G~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~CG----qC~C~~~~~~~i~G~fCECDnfsC~r  551 (783)
T KOG1226|consen  478 GQCRCDEGWL--GKKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVCG----QCVCHKPDNGKIYGKFCECDNFSCER  551 (783)
T ss_pred             cceecCCCCC--CCcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeCC----ceEecCCCCCceeeeeeeccCccccc
Confidence            4699999999  88886 22         22332111  23  3334322    577876665444577786 3223443


Q ss_pred             CC-CCCC-CCeEeecCCcceecCCCCceeCCCCCcee-ecCcccccCCCcccCccCCccCCCCCceEecCCC-ccCCCCC
Q psy11798         67 NE-GICE-DGKCINIAGGVTCECPEGFMLSPNGMKCI-DVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMG-QAWGRYC  142 (245)
Q Consensus        67 ~~-~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~-~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G-~~~G~~C  142 (245)
                      .. -.|. +|+|.-.    +|.|.+||    .|..|. +...+.|.+. +...|...+.-.-  -+|.|... |. |..|
T Consensus       552 ~~g~lC~g~G~C~CG----~CvC~~Gw----tG~~C~C~~std~C~~~-~G~iCSGrG~C~C--g~C~C~~~~~s-G~~C  619 (783)
T KOG1226|consen  552 HKGVLCGGHGRCECG----RCVCNPGW----TGSACNCPLSTDTCESS-DGQICSGRGTCEC--GRCKCTDPPYS-GEFC  619 (783)
T ss_pred             ccCcccCCCCeEeCC----cEEcCCCC----ccCCCCCCCCCccccCC-CCceeCCCceeeC--CceEcCCCCcC-cchh
Confidence            22 2366 6666432    78999999    677773 1222225331 1222332110000  25666654 77 9999


Q ss_pred             ccCCCCC
Q psy11798        143 LPCPSPN  149 (245)
Q Consensus       143 ~~C~~~~  149 (245)
                      |.||.-.
T Consensus       620 E~cptc~  626 (783)
T KOG1226|consen  620 EKCPTCP  626 (783)
T ss_pred             hcCCCCC
Confidence            9877544

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=96.43  E-value=0.0019  Score=37.27  Aligned_cols=28  Identities=39%  Similarity=0.895  Sum_probs=20.6

Q ss_pred             cCCCCCC-CCeEeecCCcceecCCCCcee
Q psy11798         66 ENEGICE-DGKCINIAGGVTCECPEGFML   93 (245)
Q Consensus        66 ~~~~~C~-~~~C~~~~g~~~C~C~~g~~l   93 (245)
                      ..++.|. ++.|+++.++|.|.|++||..
T Consensus         3 ~~~~~C~~nA~C~~~~~~~~C~C~~Gy~G   31 (36)
T PF12947_consen    3 ENNGGCHPNATCTNTGGSYTCTCKPGYEG   31 (36)
T ss_dssp             TGGGGS-TTCEEEE-TTSEEEEE-CEEEC
T ss_pred             CCCCCCCCCcEeecCCCCEEeECCCCCcc
Confidence            3445677 789999999999999999954

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.36  E-value=0.005  Score=34.59  Aligned_cols=24  Identities=46%  Similarity=1.071  Sum_probs=20.3

Q ss_pred             CCCCCCeeeeCCCCceEeCCCCce
Q psy11798         27 SNQCAFRCHNVPGSFRCICPYGYA   50 (245)
Q Consensus        27 p~~c~~~C~n~~gsy~C~C~~Gy~   50 (245)
                      ++..++.|++..+.|.|.|+.||.
T Consensus         7 ~C~~~~~C~~~~~~~~C~C~~g~~   30 (36)
T cd00053           7 PCSNGGTCVNTPGSYRCVCPPGYT   30 (36)
T ss_pred             CCCCCCEEecCCCCeEeECCCCCc
Confidence            333358999999999999999998

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.34  E-value=0.0049  Score=34.90  Aligned_cols=18  Identities=56%  Similarity=1.385  Sum_probs=17.4

Q ss_pred             eeeeCCCCceEeCCCCce
Q psy11798         33 RCHNVPGSFRCICPYGYA   50 (245)
Q Consensus        33 ~C~n~~gsy~C~C~~Gy~   50 (245)
                      +|++..++|.|.|++||.
T Consensus        12 ~C~~~~~~~~C~C~~g~~   29 (35)
T smart00181       12 TCINTPGSYTCSCPPGYT   29 (35)
T ss_pred             EEECCCCCeEeECCCCCc
Confidence            899999999999999998

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=96.10  E-value=0.0049  Score=50.86  Aligned_cols=43  Identities=28%  Similarity=0.767  Sum_probs=35.9

Q ss_pred             CCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCC
Q psy11798         55 GRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGM   98 (245)
Q Consensus        55 g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~   98 (245)
                      ++.|.++++|...++.|.+ .|.++.|+|.|.|++||.+..+++
T Consensus       181 ~~~C~~~~~C~~~~~~c~~-~C~~~~g~~~c~c~~g~~~~~~~~  223 (224)
T cd01475         181 GKICVVPDLCATLSHVCQQ-VCISTPGSYLCACTEGYALLEDNK  223 (224)
T ss_pred             cccCcCchhhcCCCCCccc-eEEcCCCCEEeECCCCccCCCCCC
Confidence            5678889999876777876 899999999999999998766553

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF00683 TB: TB domain; InterPro: IPR002212 Transforming growth factor beta (TGF-beta)-binding protein-like (TB) domain comes from human fibrillin-1[]

Probab=95.96  E-value=9.9e-05  Score=44.18  Aligned_cols=30  Identities=53%  Similarity=1.318  Sum_probs=21.6

Q ss_pred             CCCceEecCCCccCCCCCccCCCCCCCCCc
Q psy11798        125 ITVKECCCSMGQAWGRYCLPCPSPNSGEPA  154 (245)
Q Consensus       125 ~~~~~C~C~~G~~~G~~C~~C~~~~~~~~~  154 (245)
                      ..+..|.|..|.+||..|+.||..++.+|.
T Consensus        11 ~tk~~CCCs~G~aWG~~Ce~CP~~~t~ef~   40 (42)
T PF00683_consen   11 VTKSECCCSVGRAWGSPCEPCPPPGTDEFN   40 (42)
T ss_dssp             EEHHHHHTTT-SEETTTTEE---TTSHHHH
T ss_pred             eeccccCCCCCCcCCCccccCCCCCChHHh
Confidence            445689999999999999999999887664

This domain is found in fibrillins and latent TGF-beta-binding proteins (LTBPs) which are localized to fibrillar structures in the extracellular matrix [].; GO: 0005488 binding; PDB: 2W86_A 1UZJ_B 1UZQ_A 1UZK_A 1UZP_A 1APJ_A 1KSQ_A.

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=95.83  E-value=0.0036  Score=27.65  Aligned_cols=13  Identities=23%  Similarity=0.465  Sum_probs=9.4

Q ss_pred             ccccCCCCeeCCCcc
Q psy11798          3 TTMSVTGYRLRVETC   17 (245)
Q Consensus         3 ~C~C~~G~~~~g~~C   17 (245)
                      .|+|++||+  |.+|
T Consensus         1 ~C~C~~G~~--G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWT--GPNC   13 (13)
T ss_dssp             EEEE-TTEE--TTTT
T ss_pred             CccCcCCCc--CCCC
Confidence            488999998  7665

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=95.78  E-value=0.012  Score=33.55  Aligned_cols=30  Identities=40%  Similarity=1.164  Sum_probs=23.4

Q ss_pred             ccccccCCCCCC-CCeEeecCCcceecCCCCc
Q psy11798         61 INECKENEGICE-DGKCINIAGGVTCECPEGF   91 (245)
Q Consensus        61 ~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~   91 (245)
                      +++|... ..|. ++.|++..+.|.|.|+.+|
T Consensus         2 ~~~C~~~-~~C~~~~~C~~~~~~~~C~C~~g~   32 (38)
T cd00054           2 IDECASG-NPCQNGGTCVNTVGSYRCSCPPGY   32 (38)
T ss_pred             cccCCCC-CCcCCCCEeECCCCCeEeECCCCC
Confidence            4667652 2376 5699999999999999999

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=95.49  E-value=0.014  Score=46.18  Aligned_cols=99  Identities=25%  Similarity=0.637  Sum_probs=58.6

Q ss_pred             CC-CCeeeeCCCCceEeCCCCceeCCCCCeeEecccccc---CCCCCC-CCeEeecC-----CcceecCCCCceeCCCCC
Q psy11798         29 QC-AFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKE---NEGICE-DGKCINIA-----GGVTCECPEGFMLSPNGM   98 (245)
Q Consensus        29 ~c-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~---~~~~C~-~~~C~~~~-----g~~~C~C~~g~~l~~~g~   98 (245)
                      .| .+..+-..+.|.|.|.+||.+.. ...|+...+|..   ....|. .+.|++..     ..|.|.|.+||.+..  .
T Consensus         7 ~CKNG~LiQMSNHfEC~Cnegfvl~~-EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~--~   83 (197)
T PF06247_consen    7 ICKNGYLIQMSNHFECKCNEGFVLKN-ENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQ--G   83 (197)
T ss_dssp             --BTEEEEEESSEEEEEESTTEEEEE-TTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESS--S
T ss_pred             cccCCEEEEccCceEEEcCCCcEEcc-ccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeC--C
Confidence            35 56666677889999999999874 567998888864   223577 47898775     468999999997753  2


Q ss_pred             ceeecCcccccCCCcccCccCCc----cCCCCCceEecCCCcc
Q psy11798         99 KCIDVRQDVCYDSYQEGTCTLLR----KQPITVKECCCSMGQA  137 (245)
Q Consensus        99 ~C~~~~~~~C~~~~~~~~C~~~~----~~~~~~~~C~C~~G~~  137 (245)
                      .|.. .+  |    ....|..+.    ........|+|..|+.
T Consensus        84 vCvp-~~--C----~~~~Cg~GKCI~d~~~~~~~~CSC~IGkV  119 (197)
T PF06247_consen   84 VCVP-NK--C----NNKDCGSGKCILDPDNPNNPTCSCNIGKV  119 (197)
T ss_dssp             SEEE-GG--G----SS---TTEEEEEEEGGGSEEEEEE-TEEE
T ss_pred             eEch-hh--c----CceecCCCeEEecCCCCCCceeEeeeceE
Confidence            4532 22  4    223343332    2333345999999986

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=95.47  E-value=0.0078  Score=33.69  Aligned_cols=23  Identities=52%  Similarity=1.412  Sum_probs=20.1

Q ss_pred             CCC-CCeEeecC-CcceecCCCCce
Q psy11798         70 ICE-DGKCINIA-GGVTCECPEGFM   92 (245)
Q Consensus        70 ~C~-~~~C~~~~-g~~~C~C~~g~~   92 (245)
                      .|. +|+|++.. +.|.|.|++||.
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~   29 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYT   29 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEE
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCc
Confidence            388 57999999 999999999994

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG0994|consensus

Probab=94.81  E-value=0.074  Score=52.66  Aligned_cols=17  Identities=41%  Similarity=1.048  Sum_probs=13.8

Q ss_pred             ceEecCCCccCCCCCccC
Q psy11798        128 KECCCSMGQAWGRYCLPC  145 (245)
Q Consensus       128 ~~C~C~~G~~~G~~C~~C  145 (245)
                      -.|.|.+||+ |..|..|
T Consensus      1084 GQCqCkpGfG-GR~C~qC 1100 (1758)
T KOG0994|consen 1084 GQCQCKPGFG-GRTCSQC 1100 (1758)
T ss_pred             cceeccCCCC-CcchhHH
Confidence            3799999999 8888644

>KOG1226|consensus

Probab=93.78  E-value=0.23  Score=47.33  Aligned_cols=84  Identities=26%  Similarity=0.634  Sum_probs=51.1

Q ss_pred             CccccCCCCee--CCCccc-cccccCCCCC-CC--CCeeeeCCCCceEeCCCCceeCCCCCeeE---eccccccCCCC-C
Q psy11798          2 STTMSVTGYRL--RVETCE-DINECLELSN-QC--AFRCHNVPGSFRCICPYGYALAPDGRHCI---DINECKENEGI-C   71 (245)
Q Consensus         2 ~~C~C~~G~~~--~g~~C~-dideC~~~p~-~c--~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~---~~~eC~~~~~~-C   71 (245)
                      ..|+|.+...+  .|..|| |--.|..... .|  +++|.-.    +|.|.+||+    |..|+   +.+.|....+. |
T Consensus       525 GqC~C~~~~~~~i~G~fCECDnfsC~r~~g~lC~g~G~C~CG----~CvC~~Gwt----G~~C~C~~std~C~~~~G~iC  596 (783)
T KOG1226|consen  525 GQCVCHKPDNGKIYGKFCECDNFSCERHKGVLCGGHGRCECG----RCVCNPGWT----GSACNCPLSTDTCESSDGQIC  596 (783)
T ss_pred             CceEecCCCCCceeeeeeeccCcccccccCcccCCCCeEeCC----cEEcCCCCc----cCCCCCCCCCccccCCCCcee
Confidence            36888887775  677887 4444554332 24  4555432    799999999    88885   55667654432 4


Q ss_pred             C-CCeEeecCCcceecCCCC-ceeCCCCCcee
Q psy11798         72 E-DGKCINIAGGVTCECPEG-FMLSPNGMKCI  101 (245)
Q Consensus        72 ~-~~~C~~~~g~~~C~C~~g-~~l~~~g~~C~  101 (245)
                      . .|+|.-.    +|.|... |    .|..|+
T Consensus       597 SGrG~C~Cg----~C~C~~~~~----sG~~CE  620 (783)
T KOG1226|consen  597 SGRGTCECG----RCKCTDPPY----SGEFCE  620 (783)
T ss_pred             CCCceeeCC----ceEcCCCCc----Ccchhh
Confidence            4 4555432    4666544 5    577773

>smart00181 EGF Epidermal growth factor-like domain

Probab=93.74  E-value=0.096  Score=29.36  Aligned_cols=23  Identities=48%  Similarity=1.256  Sum_probs=19.4

Q ss_pred             CCCCCeEeecCCcceecCCCCce
Q psy11798         70 ICEDGKCINIAGGVTCECPEGFM   92 (245)
Q Consensus        70 ~C~~~~C~~~~g~~~C~C~~g~~   92 (245)
                      .|.++.|++..++|.|.|++||.
T Consensus         7 ~C~~~~C~~~~~~~~C~C~~g~~   29 (35)
T smart00181        7 PCSNGTCINTPGSYTCSCPPGYT   29 (35)
T ss_pred             CCCCCEEECCCCCeEeECCCCCc
Confidence            37733899999999999999994

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=93.48  E-value=0.11  Score=28.72  Aligned_cols=24  Identities=38%  Similarity=1.102  Sum_probs=20.0

Q ss_pred             CCCC-CCeEeecCCcceecCCCCce
Q psy11798         69 GICE-DGKCINIAGGVTCECPEGFM   92 (245)
Q Consensus        69 ~~C~-~~~C~~~~g~~~C~C~~g~~   92 (245)
                      ..|. ++.|++..+.|.|.|+.||.
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~   30 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYT   30 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCc
Confidence            3476 46999999999999999994

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=88.32  E-value=0.42  Score=39.29  Aligned_cols=39  Identities=21%  Similarity=0.394  Sum_probs=30.0

Q ss_pred             CCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCccC
Q psy11798         96 NGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAW  138 (245)
Q Consensus        96 ~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~  138 (245)
                      .+..|.++++  |..  .++.|.+.+.+..|+|.|.|+.||..
T Consensus       180 ~~~~C~~~~~--C~~--~~~~c~~~C~~~~g~~~c~c~~g~~~  218 (224)
T cd01475         180 QGKICVVPDL--CAT--LSHVCQQVCISTPGSYLCACTEGYAL  218 (224)
T ss_pred             ccccCcCchh--hcC--CCCCccceEEcCCCCEEeECCCCccC
Confidence            4556766666  843  46678888899999999999999973

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=86.63  E-value=0.82  Score=26.34  Aligned_cols=26  Identities=27%  Similarity=0.520  Sum_probs=18.6

Q ss_pred             CCCCCCeeeeCC-CCceEeCCCCceeC
Q psy11798         27 SNQCAFRCHNVP-GSFRCICPYGYALA   52 (245)
Q Consensus        27 p~~c~~~C~n~~-gsy~C~C~~Gy~~~   52 (245)
                      .++-++.|.+.. |++.|.|..||...
T Consensus         6 ~cP~NA~C~~~~dG~eecrCllgyk~~   32 (37)
T PF12946_consen    6 KCPANAGCFRYDDGSEECRCLLGYKKV   32 (37)
T ss_dssp             ---TTEEEEEETTSEEEEEE-TTEEEE
T ss_pred             cCCCCcccEEcCCCCEEEEeeCCcccc
Confidence            333467898877 99999999999854

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=85.75  E-value=1.2  Score=24.78  Aligned_cols=23  Identities=35%  Similarity=0.813  Sum_probs=17.8

Q ss_pred             CCCeeeeCCCCceEeCCCCceeCCCCCee
Q psy11798         30 CAFRCHNVPGSFRCICPYGYALAPDGRHC   58 (245)
Q Consensus        30 c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C   58 (245)
                      .+++|++.  ..+|.|.+||.    |..|
T Consensus        10 ~~G~C~~~--~g~C~C~~g~~----G~~C   32 (32)
T PF07974_consen   10 GHGTCVSP--CGRCVCDSGYT----GPDC   32 (32)
T ss_pred             CCCEEeCC--CCEEECCCCCc----CCCC
Confidence            37888765  56899999998    6554

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG1836|consensus

Probab=85.38  E-value=1.2  Score=46.92  Aligned_cols=22  Identities=32%  Similarity=0.667  Sum_probs=18.0

Q ss_pred             CCCceEe-cCCCccCCCCCccCCC
Q psy11798        125 ITVKECC-CSMGQAWGRYCLPCPS  147 (245)
Q Consensus       125 ~~~~~C~-C~~G~~~G~~C~~C~~  147 (245)
                      .....|. |++||. |..|+.|..
T Consensus       794 ~~~~iCk~Cp~gyt-G~rCe~c~d  816 (1705)
T KOG1836|consen  794 ILEVVCKNCPPGYT-GLRCEECAD  816 (1705)
T ss_pred             ccceecCCCCCCCc-ccccccCCC
Confidence            5567898 999999 999988643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	245
1uzk_A	162	Integrin Binding Cbegf22-tb4-cbegf33 Fragment Of Hu		5e-10
1uzj_A	162	Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Hu		8e-10
3p5b_L	400	The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE		1e-09
3p5c_L	440	The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE		1e-09
3m0c_C	791	The X-Ray Crystal Structure Of Pcsk9 In Complex Wit		1e-09
3v65_B	386	Crystal Structure Of Agrin And Lrp4 Complex Length		2e-09
2w2n_E	107	Wt Pcsk9-Deltac Bound To Egf-A H306y Mutant Of Ldlr		2e-09
1n7d_A	699	Extracellular Domain Of The Ldl Receptor Length = 6		2e-09
3gcw_E	83	Pcsk9:egfa(H306y) Length = 83		4e-09
2w2m_E	107	Wt Pcsk9-Deltac Bound To Wt Egf-A Of Ldlr Length =		5e-09
1lmj_A	86	Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2		7e-09
1hz8_A	82	Solution Structure And Backbone Dynamics Of A Conca		9e-09
1hj7_A	80	Nmr Study Of A Pair Of Ldl Receptor Ca2+ Binding Ep		1e-08
3bps_E	83	Pcsk9:egf-a Complex Length = 83		1e-08
1emn_A	82	Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epide		1e-08
1emn_A	82	Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epide		2e-04
1z6c_A	87	Solution Structure Of An Egf Pair (Egf34) From Vita		6e-07
2w86_A	147	Crystal Structure Of Fibrillin-1 Domains Cbegf9hyb2		5e-06
2bo2_A	143	Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune Syst		3e-05
2vj3_A	135	Human Notch-1 Egfs 11-13 Length = 135		8e-04

>pdb|1UZK|A Chain A, Integrin Binding Cbegf22-tb4-cbegf33 Fragment Of Human Fibrillin-1, Ca Bound To Cbegf23 Domain Only Length = 162

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 60  DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCY------DSYQ 113
           D+NEC +    C  G C+N  G   C+CP  F L+P  + C+D R   CY          
Sbjct: 2   DVNECLDPT-TCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG 60
Query: 114 EGTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGE 152
           +  C+      ++   CCCS+G+AWG  C  CP+ N+ E
Sbjct: 61  DTACSNEIGVGVSKASCCCSLGKAWGTPCEXCPAVNTSE 99

>pdb|1UZJ|A Chain A, Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Human Fibrillin-1, Holo Form. Length = 162

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 60  DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCY------DSYQ 113
           D+NEC +    C  G C+N  G   C+CP  F L+P  + C+D R   CY          
Sbjct: 2   DVNECLDPT-TCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG 60
Query: 114 EGTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGE 152
           +  C+      ++   CCCS+G+AWG  C  CP+ N+ E
Sbjct: 61  DTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSE 99

>pdb|3P5B|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE RECEPTOR IN AN Extended Conformation Length = 400

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C+  C+++   + C+CP G+ L    R C DI+EC++ +   +   C+N+ 
Sbjct: 1   NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ--LCVNLE 57
Query: 81  GGVTCECPEGFMLSPNGMKC 100
           GG  C+C EGF L P+   C
Sbjct: 58  GGYKCQCEEGFQLDPHTKAC 77

>pdb|3P5C|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE RECEPTOR IN AN Extended Conformation Length = 440

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C+  C+++   + C+CP G+ L    R C DI+EC++ +   +   C+N+ 
Sbjct: 41  NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ--LCVNLE 97
Query: 81  GGVTCECPEGFMLSPNGMKC 100
           GG  C+C EGF L P+   C
Sbjct: 98  GGYKCQCEEGFQLDPHTKAC 117

>pdb|3M0C|C Chain C, The X-Ray Crystal Structure Of Pcsk9 In Complex With The Ldl Receptor Length = 791

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C+  C+++   + C+CP G+ L    R C DI+EC++ +   +   C+N+ 
Sbjct: 313 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ--LCVNLE 369
Query: 81  GGVTCECPEGFMLSPNGMKCIDV 103
           GG  C+C EGF L P+   C  V
Sbjct: 370 GGYKCQCEEGFQLDPHTKACKAV 392

>pdb|3V65|B Chain B, Crystal Structure Of Agrin And Lrp4 Complex Length = 386

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 30  CAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPE 89
           CA +C  + G+ +C C  GY L  DGR C D+NEC E EG C  G C N  G   C C  
Sbjct: 13  CAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAE-EGYCSQG-CTNSEGAFQCWCEA 70
Query: 90  GFMLSPNGMKC 100
           G+ L P+   C
Sbjct: 71  GYELRPDRRSC 81

>pdb|2W2N|E Chain E, Wt Pcsk9-Deltac Bound To Egf-A H306y Mutant Of Ldlr Length = 107

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C++ C+++   + C+CP G+ L    R C DI+EC++ +   +   C+N+ 
Sbjct: 30  NECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ--LCVNLE 86
Query: 81  GGVTCECPEGFMLSPNGMKC 100
           GG  C+C EGF L P+   C
Sbjct: 87  GGYKCQCEEGFQLDPHTKAC 106

>pdb|1N7D|A Chain A, Extracellular Domain Of The Ldl Receptor Length = 699

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C+  C+++   + C+CP G+ L    R C DI+EC++ +   +   C+N+ 
Sbjct: 295 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ--LCVNLE 351
Query: 81  GGVTCECPEGFMLSPNGMKCIDV 103
           GG  C+C EGF L P+   C  V
Sbjct: 352 GGYKCQCEEGFQLDPHTKACKAV 374

>pdb|3GCW|E Chain E, Pcsk9:egfa(H306y) Length = 83

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C++ C+++   + C+CP G+ L    R C DI+EC++ +   +   C+N+ 
Sbjct: 6   NECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ--LCVNLE 62
Query: 81  GGVTCECPEGFMLSPNGMKC 100
           GG  C+C EGF L P+   C
Sbjct: 63  GGYKCQCEEGFQLDPHTKAC 82

>pdb|2W2M|E Chain E, Wt Pcsk9-Deltac Bound To Wt Egf-A Of Ldlr Length = 107

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C+  C+++   + C+CP G+ L    R C DI+EC++ +   +   C+N+ 
Sbjct: 30  NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ--LCVNLE 86
Query: 81  GGVTCECPEGFMLSPNGMKC 100
           GG  C+C EGF L P+   C
Sbjct: 87  GGYKCQCEEGFQLDPHTKAC 106

>pdb|1LMJ|A Chain A, Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2+ Binding Epidermal Growth Factor-like Domains Length = 86

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 19  DINECLELSNQCAF-RCHNVPGSFRCICPYGYALA-PDGRHCIDINECKENEGICEDGKC 76
           DI+EC    + C   +C N PG F C C  GY       ++C+DI+EC+ +  +C  G C
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVC 61
Query: 77  INIAGGVTCECPEGFMLSPNGMKCI 101
            N  G   CECP G  LSPN   CI
Sbjct: 62  HNTEGSYRCECPPGHQLSPNISACI 86

>pdb|1HZ8|A Chain A, Solution Structure And Backbone Dynamics Of A Concatemer Of Egf-Homology Modules Of The Human Low Density Lipoprotein Receptor Length = 82

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C+  C+++   + C+CP G+ L    R C DI+EC++ +   +   C+N+ 
Sbjct: 3   NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ--LCVNLE 59
Query: 81  GGVTCECPEGFMLSPNGMKCIDV 103
           GG  C+C EGF L P+   C  V
Sbjct: 60  GGYKCQCEEGFQLDPHTKACKAV 82

>pdb|1HJ7|A Chain A, Nmr Study Of A Pair Of Ldl Receptor Ca2+ Binding Epidermal Growth Factor-Like Domains, 20 Structures Length = 80

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C+  C+++   + C+CP G+ L    R C DI+EC++ +   +   C+N+ 
Sbjct: 3   NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ--LCVNLE 59
Query: 81  GGVTCECPEGFMLSPNGMKC 100
           GG  C+C EGF L P+   C
Sbjct: 60  GGYKCQCEEGFQLDPHTKAC 79

>pdb|3BPS|E Chain E, Pcsk9:egf-a Complex Length = 83

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C+  C+++   + C+CP G+ L    R C DI+EC++ +   +   C+N+ 
Sbjct: 6   NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ--LCVNLE 62
Query: 81  GGVTCECPEGFMLSPNGMKC 100
           GG  C+C EGF L P+   C
Sbjct: 63  GGYKCQCEEGFQLDPHTKAC 82

>pdb|1EMN|A Chain A, Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epidermal Growth Factor-Like Domains, Minimized Average Structure Length = 82

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCIN 78
          D++EC E       +C N  GS+RC CP+GY LA  G  C+D +EC      C +G C N
Sbjct: 4  DMDECKEPDVCKHGQCINTDGSYRCECPFGYILA--GNECVDTDECSVGN-PCGNGTCKN 60
Query: 79 IAGGVTCECPEGFMLSP 95
          + GG  C C EGF   P
Sbjct: 61 VIGGFECTCEEGFEPGP 77

>pdb|1EMN|A Chain A, Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epidermal Growth Factor-Like Domains, Minimized Average Structure Length = 82

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 59  IDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCT 118
           +D++ECKE + +C+ G+CIN  G   CECP G++L+  G +C+D  +    +    GTC 
Sbjct: 3   VDMDECKEPD-VCKHGQCINTDGSYRCECPFGYILA--GNECVDTDECSVGNPCGNGTC- 58
Query: 119 LLRKQPITVKECCCSMG 135
              K  I   EC C  G
Sbjct: 59  ---KNVIGGFECTCEEG 72

>pdb|1Z6C|A Chain A, Solution Structure Of An Egf Pair (Egf34) From Vitamin K- Dependent Protein S Length = 87

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 18  EDINECLELSNQCAFR-CHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKC 76
           +D++EC    + C    C N+PG F C CP GY      + C DI+EC EN  +C    C
Sbjct: 1   KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSEN--MCAQ-LC 57
Query: 77  INIAGGVTCEC--PEGFMLSPNGMKC 100
           +N  GG TC C   +GF L+ +   C
Sbjct: 58  VNYPGGYTCYCDGKKGFKLAQDQKSC 83

>pdb|2W86|A Chain A, Crystal Structure Of Fibrillin-1 Domains Cbegf9hyb2cbegf10, Calcium Saturated Form Length = 147

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 60  DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTL 119
           DI+EC+ +   C +G C N  G   CEC     L P    CI+  +  C+ +  +G C +
Sbjct: 3   DIDECESSP--CINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEI 60
Query: 120 LRKQPITVKECCCSMGQAWGRYCLPC 145
                    +CC S+G AWG  C  C
Sbjct: 61  NINGATLKSQCCSSLGAAWGSPCTLC 86

>pdb|2BO2|A Chain A, Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune System Molecule, In Complex With Calcium. Length = 143

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 14  VETCEDINECLELSNQCAFR---CHNVPGSFRCICPYGYALAPDGR--------HCIDIN 62
           +ETC+DINEC  LS     +   C N  GS+ C+C  GY      +         C D++
Sbjct: 38  METCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVD 97
Query: 63  ECKENEGICEDGK-CINIAGGVTCECPEGFMLS---PNGMK 99
           EC   +  C+    C N  G  +C C  G+      PN  K
Sbjct: 98  ECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK 138

>pdb|2VJ3|A Chain A, Human Notch-1 Egfs 11-13 Length = 135

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 8   TGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHC-IDINECKE 66
           TG R  +    D+NEC+    Q    C +  G F+CIC  GY    +G HC ++ +EC  
Sbjct: 37  TGPRCEI----DVNECVSNPCQNDATCLDQIGEFQCICMPGY----EGVHCEVNTDECAS 88
Query: 67  NEGICEDGKCINIAGGVTCECPEGF 91
           +  +  +G+C++      CECP GF
Sbjct: 89  SPCL-HNGRCLDKINEFQCECPTGF 112

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	245
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	2e-27
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	8e-14
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-26
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	9e-21
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	5e-19
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	2e-25
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	3e-15
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	7e-13
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	2e-25
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	3e-16
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	4e-25
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	5e-11
2bou_A	143	EGF-like module containing mucin-like hormone rece	4e-23
2bou_A	143	EGF-like module containing mucin-like hormone rece	1e-14
2bou_A	143	EGF-like module containing mucin-like hormone rece	4e-13
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	1e-21
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	1e-15
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	2e-13
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	6e-12
3v65_B	386	Low-density lipoprotein receptor-related protein;	2e-18
3v65_B	386	Low-density lipoprotein receptor-related protein;	4e-07
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	3e-16
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	6e-15
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	7e-15
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	3e-09
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	5e-14
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	9e-06
1aut_L	114	Activated protein C; serine proteinase, plasma cal	8e-14
1aut_L	114	Activated protein C; serine proteinase, plasma cal	2e-08
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	8e-14
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	2e-12
1apj_A	74	Fibrillin; microfibril, TB module, marfan syndrome	5e-13
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	5e-13
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	7e-07
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	7e-04
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	3e-11
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	1e-08
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	2e-07
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	3e-07
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	5e-11
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	9e-06
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	5e-11
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	5e-11
2vh0_B	134	Activated factor XA light chain; serine protease,	2e-10
2vh0_B	134	Activated factor XA light chain; serine protease,	9e-05
2vh0_B	134	Activated factor XA light chain; serine protease,	4e-04
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	7e-09
1ksq_A	75	Latent transforming growth factor beta binding pro	2e-08
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	3e-08
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	5e-05
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	1e-07
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	3e-06
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	3e-07
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	1e-04
1nzi_A	159	Complement C1S component; calcium, innate immunity	4e-07
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	1e-06
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	3e-06
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	1e-05
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	3e-06
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	1e-05
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	4e-06
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	4e-06
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	1e-04
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	8e-05
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	5e-04
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	1e-04
1szb_A	170	Mannose binding lectin-associated serine protease-	3e-04

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 99.7 bits (249), Expect = 2e-27
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 19  DINECLELSNQCA-FRCHNVPGSFRCICPYGYAL-APDGRHCIDINECKENEGICEDGKC 76
           DI+EC    + C   +C N PG F C C  GY       ++C+DI+EC+ +  +C  G C
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVC 61

Query: 77  INIAGGVTCECPEGFMLSPNGMKCI 101
            N  G   CECP G  LSPN   CI
Sbjct: 62  HNTEGSYRCECPPGHQLSPNISACI 86

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 64.2 bits (157), Expect = 8e-14
 Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 8  TGYRLRVE---TCEDINECLELSNQCAF-RCHNVPGSFRCICPYGYALAPDGRHCI 59
           GY         C DI+EC      C    CHN  GS+RC CP G+ L+P+   CI
Sbjct: 31 EGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 99.7 bits (249), Expect = 2e-26
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 1/94 (1%)

Query: 8   TGYRL-RVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKE 66
            G  + +   C  + +      +     +       C    G+   P      DI+EC+E
Sbjct: 68  IGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQE 127

Query: 67  NEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC 100
             G+C+ GKCIN  G   C CP G+ L+ +   C
Sbjct: 128 LPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 161

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 84.7 bits (210), Expect = 9e-21
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 19  DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCIN 78
           D+NECL+ +   +  C N PGS+ C CP  + L P    C+D            D +   
Sbjct: 2   DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNC----YLDIRPRG 57

Query: 79  IAGGVTCECPEGFMLSPNGMKCID 102
             G   C    G  +S     C  
Sbjct: 58  DNGDTACSNEIGVGVSKASCCCSL 81

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 80.1 bits (198), Expect = 5e-19
 Identities = 13/88 (14%), Positives = 22/88 (25%), Gaps = 5/88 (5%)

Query: 16  TCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGK 75
            C D       +     R     G   C    G  ++     C  + +            
Sbjct: 40  GCVDTRSG---NCYLDIRPRGDNGDTACSNEIGVGVSKASCCC-SLGKAWGTPCEMC-PA 94

Query: 76  CINIAGGVTCECPEGFMLSPNGMKCIDV 103
                  + C   EGF  +P  +   D+
Sbjct: 95  VNTSEYKILCPGGEGFRPNPITVILEDI 122

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 95.0 bits (237), Expect = 2e-25
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 18  EDINECLELSNQCAF-RCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKC 76
           +D++EC    + C    C N+PG F C CP GY      + C DI+EC EN  +C    C
Sbjct: 1   KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSEN--MCA-QLC 57

Query: 77  INIAGGVTCEC--PEGFMLSPNGMKCIDV 103
           +N  GG TC C   +GF L+ +   C  V
Sbjct: 58  VNYPGGYTCYCDGKKGFKLAQDQKSCEVV 86

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 68.1 bits (167), Expect = 3e-15
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 8  TGYRLRVE--TCEDINECLELSNQCAFRCHNVPGSFRCIC--PYGYALAPDGRHCIDIN 62
           GYR  ++  +CEDI+EC E  N CA  C N PG + C C    G+ LA D + C  ++
Sbjct: 31 EGYRYNLKSKSCEDIDECSE--NMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCEVVS 87

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 61.5 bits (150), Expect = 7e-13
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 60  DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCT 118
           D++EC     IC    C NI G   CECPEG+  +     C D+  D C ++     C 
Sbjct: 2   DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDI--DECSENMCAQLCV 58

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 95.5 bits (238), Expect = 2e-25
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 15  ETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDG 74
           +     NECL+ +  C++ C+++   + C+CP G+ L      C DI+EC ++   C   
Sbjct: 24  QGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQR-RCEDIDEC-QDPDTC-SQ 80

Query: 75  KCINIAGGVTCECPEGFMLSPNGMKC 100
            C+N+ GG  C+C EGF L P+   C
Sbjct: 81  LCVNLEGGYKCQCEEGFQLDPHTKAC 106

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 71.2 bits (175), Expect = 3e-16
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 33  RCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFM 92
             H+    +              +  +  NEC +N G C    C ++  G  C CP+GF 
Sbjct: 5   HHHHPMSDYDIPTTENL----YFQGAMGTNECLDNNGGCS-YVCNDLKIGYECLCPDGFQ 59

Query: 93  LSPNGMKCIDV 103
           L     +C D+
Sbjct: 60  LVAQR-RCEDI 69

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 93.8 bits (234), Expect = 4e-25
 Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 16 TCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGK 75
          +  D++EC E       +C N  GS+RC CP+GY L   G  C+D +EC      C +G 
Sbjct: 1  SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDECSVGNP-CGNGT 57

Query: 76 CINIAGGVTCECPEGFMLSPNG 97
          C N+ GG  C C EGF   P  
Sbjct: 58 CKNVIGGFECTCEEGFEPGPMM 79

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 8  TGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHC 58
           GY L    C D +EC   +      C NV G F C C  G+        C
Sbjct: 32 FGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPG-PMMTC 81

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 90.6 bits (225), Expect = 4e-23
 Identities = 31/106 (29%), Positives = 39/106 (36%), Gaps = 14/106 (13%)

Query: 15  ETCEDINECLELSNQC---AFRCHNVPGSFRCICPYGYALA--------PDGRHCIDINE 63
           ETC+DINEC  LS         C N  GS+ C+C  GY                C D++E
Sbjct: 39  ETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDE 98

Query: 64  CKENEGIC-EDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
           C   +  C     C N  G  +C C  G+               VC
Sbjct: 99  CSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKD--TVC 142

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 67.9 bits (166), Expect = 1e-14
 Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 11/99 (11%)

Query: 19  DINECLELSNQCAFRCHNVPGSFRCICPYGY-----ALAPDGRHCIDINECKENEGIC-- 71
           D   C   +  C  +  +   +  C C  G+      +      C DINEC     +   
Sbjct: 1   DSRGC---ARWCP-QDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCG 56

Query: 72  EDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYD 110
           +   C N  G   C C  G+          +  ++ C D
Sbjct: 57  KFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQD 95

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 63.7 bits (155), Expect = 4e-13
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 16  TCEDINECLELSNQC--AFRCHNVPGSFRCICPYGYALAPDGRHCIDINECK 65
           TC+D++EC    +QC  +  C N  GS+ C C  G+       +      C+
Sbjct: 92  TCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCE 143

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 86.6 bits (215), Expect = 1e-21
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 17  CEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKC 76
               ++C                    IC  GY+    G  C DI+EC+   G+C++G C
Sbjct: 65  ATLKSQCCSSLGAAW-GSPCTLCQVDPICGKGYSRI-KGTQCEDIDECEVFPGVCKNGLC 122

Query: 77  INIAGGVTCECPEGFMLSPNGMKCI 101
           +N  G   C+CP G  L   G  C+
Sbjct: 123 VNTRGSFKCQCPSGMTLDATGRICL 147

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 70.8 bits (174), Expect = 1e-15
 Identities = 25/108 (23%), Positives = 33/108 (30%), Gaps = 24/108 (22%)

Query: 18  EDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINE-----------CKE 66
            DI+EC   S      C N PGSF C C     L P    CI+  +           C+ 
Sbjct: 2   ADIDECES-SPCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEI 60

Query: 67  NEGICEDGK-----------CINIAGGVTCECPEGFMLSPNGMKCIDV 103
           N                          V   C +G+     G +C D+
Sbjct: 61  NINGATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRI-KGTQCEDI 107

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 60  DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTL 119
           DI+EC+ +   C +G C N  G   CEC     L P    CI+  +  C+ +  +G C +
Sbjct: 3   DIDECESS--PCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEI 60

Query: 120 LRKQPITVKECCCSMGQAWGRYCLPCP 146
                    +CC S+G AWG  C  C 
Sbjct: 61  NINGATLKSQCCSSLGAAWGSPCTLCQ 87

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 60.4 bits (147), Expect = 6e-12
 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 16  TCEDINECLELSNQCA-FRCHNVPGSFRCICPYGYALAPDGRHCI 59
            CEDI+EC      C    C N  GSF+C CP G  L   GR C+
Sbjct: 103 QCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 82.5 bits (203), Expect = 2e-18
 Identities = 31/128 (24%), Positives = 44/128 (34%), Gaps = 2/128 (1%)

Query: 19  DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCIN 78
               C   +  CA +C  + G+ +C C  GY L  DGR C D+NEC E  G C    C N
Sbjct: 2   GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEE-GYC-SQGCTN 59

Query: 79  IAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAW 138
             G   C C  G+ L P+   C  +  +             +            ++  A 
Sbjct: 60  SEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAI 119

Query: 139 GRYCLPCP 146
                   
Sbjct: 120 ALDFHHRR 127

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 49.0 bits (116), Expect = 4e-07
 Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 5/116 (4%)

Query: 8   TGYRLRV--ETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECK 65
           TGYRL     TC+D+NEC E    C+  C N  G+F+C C  GY L PD R C  +    
Sbjct: 30  TGYRLTEDGRTCQDVNECAE-EGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEP 88

Query: 66  ENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR 121
               +  +   I        E         N +      +             +LR
Sbjct: 89  VL--LFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILR 142

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 71.6 bits (176), Expect = 3e-16
 Identities = 30/97 (30%), Positives = 35/97 (36%), Gaps = 12/97 (12%)

Query: 8   TGYRLR---VETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
            G+         C+           C   C        C CP GY L  DG  C DI+EC
Sbjct: 30  EGFAPIPHEPHRCQMFCNQ----TACPADCDP-NTQASCECPEGYILD-DGFICTDIDEC 83

Query: 65  KENEGICEDGKCINIAGGVTCECPEGFMLSP-NGMKC 100
            EN G C  G C N+ G   C C     L+   G  C
Sbjct: 84  -ENGGFCS-GVCHNLPGTFECICGPDSALAGQIGTDC 118

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 68.2 bits (167), Expect = 6e-15
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 11/88 (12%)

Query: 18  EDINECLELSNQCAFRCHNV-PGSFRCICPYGYALAPDGRH-CIDINECKENEGICEDGK 75
           E ++ C      C ++C  +   S+ C+C  G+A  P   H C            C    
Sbjct: 2   EPVDPCF--RANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC---- 55

Query: 76  CINIAGGVTCECPEGFMLSPNGMKCIDV 103
             +     +CECPEG++L  +G  C D+
Sbjct: 56  --DPNTQASCECPEGYILD-DGFICTDI 80

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 72.2 bits (176), Expect = 7e-15
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 3/127 (2%)

Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
           NECL+ +  C+  C+++   + C+CP G+ L    R C DI+EC++    C    C+N+ 
Sbjct: 1   NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDP-DTC-SQLCVNLE 57

Query: 81  GGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGR 140
           GG  C+C EGF L P+   C  V                +            ++      
Sbjct: 58  GGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVAL 117

Query: 141 YCLPCPS 147
                 +
Sbjct: 118 DTEVASN 124

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 55.6 bits (133), Expect = 3e-09
 Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 3/102 (2%)

Query: 9   GYRLRVE-TCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKEN 67
           G++L  +  CEDI+EC +  + C+  C N+ G ++C C  G+ L P  + C  +      
Sbjct: 28  GFQLVAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYL 86

Query: 68  EGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCY 109
                      +    +        L        +V  +  Y
Sbjct: 87  FFTNRHEVR-KMTLDRSEYTSLIPNLRNVVALDTEVASNRIY 127

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 66.1 bits (162), Expect = 5e-14
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 10/80 (12%)

Query: 16 TCEDINECLELSNQCA--FRCHNVPGSFRCICPYGYALAPDGRHC-IDINECKENEGICE 72
          + +D++EC   +N C    +C N  GSF C C  GY     G  C ID+NEC  N   C+
Sbjct: 1  SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCEIDVNECVSN--PCQ 54

Query: 73 -DGKCINIAGGVTCECPEGF 91
           D  C++  G   C C  G+
Sbjct: 55 NDATCLDQIGEFQCICMPGY 74

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 43.0 bits (102), Expect = 9e-06
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 10/65 (15%)

Query: 15  ETCE-DINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC-IDINECKENEGI 70
             CE + +EC   S+ C    RC +    F+C CP G+     G  C +D++   + + +
Sbjct: 77  VHCEVNTDECA--SSPCLHNGRCLDKINEFQCECPTGFT----GHLCQVDLHHILDAQKM 130

Query: 71  CEDGK 75
             + +
Sbjct: 131 VWNHR 135

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 65.1 bits (159), Expect = 8e-14
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 10/98 (10%)

Query: 16  TCEDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC---IDINECKENEGI 70
            C  +      ++ C     C +  GSF C C  G+    +GR C   +    C  + G 
Sbjct: 8   QCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGW----EGRFCQREVSFLNCSLDNGG 63

Query: 71  CEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
           C    C+   G   C C  G+ L  + ++C    +  C
Sbjct: 64  CT-HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPC 100

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 12/50 (24%), Positives = 15/50 (30%)

Query: 15 ETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
          +       C   +  C   C    G  RC C  GY L  D   C    + 
Sbjct: 49 QREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 98

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 69.3 bits (169), Expect = 8e-14
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 16/104 (15%)

Query: 19  DINECLELSNQCA--FRCHNVP-GSFRCI-CPYGYALAPDGRHCIDINECKENEGICEDG 74
           D + CL  SN C    +C + P GS+ C  CP G+    +G HC D++EC     IC   
Sbjct: 2   DPDGCL--SNPCFPGAQCSSFPDGSWSCGFCPVGFL--GNGTHCEDLDECALVPDICFST 57

Query: 75  ----KCINIAGGVTCE-CPEGF---MLSPNGMKCIDVRQDVCYD 110
               +C+N   G  C  CP  +        G++     + VC  
Sbjct: 58  SKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP 101

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 65.0 bits (158), Expect = 2e-12
 Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 25/119 (21%)

Query: 16  TCEDINECLELSNQC-----AFRCHNVPGSFRCI-CPYGY-----------ALAPDGRHC 58
            CED++EC  + + C       RC N    F C+ CP  Y           A   + + C
Sbjct: 40  HCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVC 99

Query: 59  IDINECKENEGIC-EDGKCINIA----GGVTCECPEGFMLSPNGMKC-IDVRQDVCYDS 111
              N CK+    C +  +CI +         CEC  G+  + +G+ C  D   D   + 
Sbjct: 100 EPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGY--AGDGLICGEDSDLDGWPNL 156

>1apj_A Fibrillin; microfibril, TB module, marfan syndrome, connective tissue, novel fold, extracellular matrix; NMR {Homo sapiens} SCOP: g.23.1.1 Length = 74

 Score = 61.8 bits (150), Expect = 5e-13
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 100 CIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSM-GQAWGRYCLPCPSPNSGE 152
             D+R   CY  ++ G C+  + +  + +ECCC++ G+ WG  C  CP+     
Sbjct: 2   AQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEA 55

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 64.8 bits (158), Expect = 5e-13
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 16/129 (12%)

Query: 17  CEDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC-IDINECKENEGICED 73
            +D ++C   ++ C    +C +  G + C C  G+     G++C +   +    +    D
Sbjct: 39  YKDGDQCE--TSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCD 92

Query: 74  GKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCS 133
             C      V C C  G+ L+ NG  CI      C    ++       ++  +V +   S
Sbjct: 93  QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC---GKQTLE----RRKRSVAQATSS 145

Query: 134 MGQAWGRYC 142
            G+A     
Sbjct: 146 SGEAPDSIT 154

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 47.4 bits (113), Expect = 7e-07
 Identities = 19/90 (21%), Positives = 21/90 (23%), Gaps = 8/90 (8%)

Query: 16  TCE-DINECLELSN-QCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE- 72
            CE    +   L N  C   CH    S  C C  GY LA +G               C  
Sbjct: 75  NCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG---KACIPTGPYP--CGK 129

Query: 73  DGKCINIAGGVTCECPEGFMLSPNGMKCID 102
                            G        K  D
Sbjct: 130 QTLERRKRSVAQATSSSGEAPDSITWKPYD 159

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 38.6 bits (90), Expect = 7e-04
 Identities = 20/100 (20%), Positives = 31/100 (31%), Gaps = 15/100 (15%)

Query: 21  NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIA 80
            EC+E    C    +                        D ++C+ +    + GKC +  
Sbjct: 10  RECME--ETC---SYEEAREVFEDSDKTNE---FWNKYKDGDQCETSPCQNQ-GKCKDGL 60

Query: 81  GGVTCECPEGFMLSPNGMKCIDVRQDVCYDS--YQEGTCT 118
           G  TC C EGF     G  C    + +C       +  C 
Sbjct: 61  GEYTCTCLEGF----EGKNCELFTRKLCSLDNGDCDQFCH 96

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 59.7 bits (143), Expect = 3e-11
 Identities = 24/101 (23%), Positives = 32/101 (31%), Gaps = 5/101 (4%)

Query: 8   TGYRLRVETCEDINEC---LELSNQCAFRCHNVPGSFRCICPYGYALAP-DGRHCIDINE 63
            GY L  +TC            S +C     +   S  C C  G    P D   C    E
Sbjct: 80  EGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGE 139

Query: 64  CKENEGIC-EDGKCINIAGGVTCECPEGFMLSPNGMKCIDV 103
                    ++  C N+ G   C+C EGF        C+  
Sbjct: 140 TACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCLGP 180

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 52.3 bits (124), Expect = 1e-08
 Identities = 23/110 (20%), Positives = 34/110 (30%), Gaps = 12/110 (10%)

Query: 34  CHNVPGSFRCICPYGYALAPDGRHCIDINECK--------ENEGICEDGKCINIAGGVTC 85
              +   F C+C  G         C + NEC            G C +           C
Sbjct: 18  LVQMSNHFXCMCNEGLVHL-SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXC 76

Query: 86  ECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMG 135
            C EG+ L  +       +   C +S   G C +     I    C C++G
Sbjct: 77  GCIEGYTLXEDTCVLDVCQYXNCGES---GECIVEYLSEIQSAGCSCAIG 123

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 49.3 bits (116), Expect = 2e-07
 Identities = 20/104 (19%), Positives = 29/104 (27%), Gaps = 10/104 (9%)

Query: 15  ETCEDINECL---------ELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECK 65
            TCE+ NEC          E               + C C  GY L  D           
Sbjct: 39  NTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXN 98

Query: 66  ENEGICEDGKCINIAGGVTCECPEGFMLSP-NGMKCIDVRQDVC 108
             E      + ++      C C  G + +P +   C    +  C
Sbjct: 99  CGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETAC 142

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 48.5 bits (114), Expect = 3e-07
 Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 2/53 (3%)

Query: 17  CEDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHCIDINECKEN 67
           C    E             C NV G + C C  G+    +   C+  +    +
Sbjct: 134 CTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCLGPHHHHHH 186

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 55.5 bits (134), Expect = 5e-11
 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 8/49 (16%)

Query: 18 EDINECLELSN--------QCAFRCHNVPGSFRCICPYGYALAPDGRHC 58
           D++EC   S         QC   CHN  G + C C  GY L  D   C
Sbjct: 2  VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 41.3 bits (97), Expect = 9e-06
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 7/49 (14%)

Query: 59  IDINECKENEGICEDGK-------CINIAGGVTCECPEGFMLSPNGMKC 100
           +D++EC       E+         C N  GG  C C  G+ L  +   C
Sbjct: 2   VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 58.1 bits (141), Expect = 5e-11
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 12/98 (12%)

Query: 17  CEDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC-IDINECKENE---GI 70
             D ++C   S+ C     C +   S+ C C   +     GR+C    ++        G 
Sbjct: 44  YSDGDQCA--SSPCQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLICVNENGG 97

Query: 71  CEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
           CE     +     +C C EG+ L  +G+ C    +  C
Sbjct: 98  CEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC 135

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 58.1 bits (141), Expect = 5e-11
 Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 10/95 (10%)

Query: 17  CEDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC-IDINECKENEGICED 73
             D ++C    N C     C +   S+ C C  G+     G++C +D     +N G C+ 
Sbjct: 45  YVDGDQCE--PNPCLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIKN-GRCKQ 97

Query: 74  GKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
                    V C C  G+ L+P+   C       C
Sbjct: 98  FCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPC 132

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 9/95 (9%)

Query: 17  CEDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC-IDINECKENEGICED 73
            +D ++C   ++ C    +C +  G + C C  G+     G++C +   +    +    D
Sbjct: 39  YKDGDQCE--TSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCD 92

Query: 74  GKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
             C      V C C  G+ L+ NG  CI      C
Sbjct: 93  QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 127

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 40.4 bits (95), Expect = 9e-05
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 11/72 (15%)

Query: 21 NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHC-IDINECKENEGICEDGKCINI 79
           EC+E    C    +                     +   D ++C+ +      GKC + 
Sbjct: 10 RECME--ETC---SYEEAREVFEDSDKTNE----FWNKYKDGDQCETSPC-QNQGKCKDG 59

Query: 80 AGGVTCECPEGF 91
           G  TC C EGF
Sbjct: 60 LGEYTCTCLEGF 71

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 9/62 (14%)

Query: 16  TCE-DINECLELSN-QCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKE----NEG 69
            CE    +   L N  C   CH    S  C C  GY LA +G                + 
Sbjct: 75  NCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG---KACIPTGPYPCGKQT 131

Query: 70  IC 71
           + 
Sbjct: 132 LE 133

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 54.3 bits (131), Expect = 7e-09
 Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 9/109 (8%)

Query: 19  DINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC-IDINECKENEGICEDGK 75
             + C+  S  C     C +    + C C  GY    +G +C +  NEC           
Sbjct: 4   GGSPCI--SQPCLHNGSCQDSIWGYTCTCSPGY----EGSNCELAKNECHPERTDGCQHF 57

Query: 76  CINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQP 124
           C+      TC C +G+ L  +  +C+   Q  C     E     L+  P
Sbjct: 58  CLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVLTSEKRAPDLQDLP 106

>1ksq_A Latent transforming growth factor beta binding protein 1; structure, LTBP-1, TGF-beta, TB domain, latency associated propeptide, LAP; NMR {Homo sapiens} SCOP: g.23.1.1 Length = 75

 Score = 49.2 bits (117), Expect = 2e-08
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 96  NGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYC--LPCPSPNSGE 152
           +  +  + +++  Y+      C  +    +T +ECCC+ G  WG  C   PCP   + E
Sbjct: 1   SADQPKEEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAE 59

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Length = 55

 Score = 47.8 bits (114), Expect = 3e-08
 Identities = 13/35 (37%), Positives = 15/35 (42%)

Query: 30 CAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
          C   CH    S  C C  GY LA +G+ CI     
Sbjct: 11 CDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPY 45

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Length = 55

 Score = 39.3 bits (92), Expect = 5e-05
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 62  NECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
             C  + G C+   C      V C C  G+ L+ NG  CI      C
Sbjct: 2   KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 47

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 50.6 bits (120), Expect = 1e-07
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 20  INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINI 79
           +NEC E    C+  C N  G+F+C C  GY L PD R C  +                 +
Sbjct: 1   VNECAE-EGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVL 59

Query: 80  AGGVTCECPEGFMLSPNGMKCIDVRQDVCYDS 111
                       + +   +     R+++ + S
Sbjct: 60  PHRSEYTLLLNNLENAIAL-DFHHRRELVFWS 90

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 46.4 bits (109), Expect = 3e-06
 Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 61  INECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTC 117
           +NEC E  G C    C N  G   C C  G+ L P+   C  +  +           
Sbjct: 1   VNECAEE-GYC-SQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDI 55

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 Length = 51

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 10/35 (28%), Positives = 13/35 (37%)

Query: 30 CAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
          C   C       RC C +GY L  D + C+     
Sbjct: 8  CDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 Length = 51

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 64  CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
           C  + G C+   C      V C C  G++L  +   C+   +  C
Sbjct: 1   CSLDNGGCD-QFCREERSEVRCSCAHGYVLGDDSKSCVSTERFPC 44

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159

 Score = 47.5 bits (113), Expect = 4e-07
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 2   STTMSVTGYRLRVETCEDINECLELSN-QCAFRCHNVPGSFRCICPYGYALAPDGRHCID 60
           S     TG+        DINEC +  +  C+  C+N  G + C CP  Y L  D ++C  
Sbjct: 100 SNEERFTGFAAYYVAT-DINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Length = 91

 Score = 44.8 bits (106), Expect = 1e-06
 Identities = 18/71 (25%), Positives = 24/71 (33%), Gaps = 12/71 (16%)

Query: 27 SNQCAFR-CHNVPGSFRCICPYGYALAPDGRHCIDINECKE----NEGICEDGKCINIAG 81
           +Q   R          C C  G A      H + +  C E    N G C+     +   
Sbjct: 17 QHQSWLRPVLRSNRVEYCWCNSGRA----QCHSVPVKSCSEPRCFNGGTCQQALYFS--- 69

Query: 82 GVTCECPEGFM 92
             C+CPEGF 
Sbjct: 70 DFVCQCPEGFA 80

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} Length = 619

 Score = 46.7 bits (110), Expect = 3e-06
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 28  NQCAFRCHNVPGSFRCICPYGYALAPDGRHCI 59
             C+  C   P   RC CP G+ L  D + CI
Sbjct: 586 GGCSHLCLYRPQGLRCACPIGFELISDMKTCI 617

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} Length = 619

 Score = 44.8 bits (105), Expect = 1e-05
 Identities = 16/60 (26%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 42  RCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCI 101
           +     G       R        +EN G C    C+    G+ C CP GF L  +   CI
Sbjct: 560 QLPDLMGLKATNVHRVIGSNPCAEEN-GGCSHL-CLYRPQGLRCACPIGFELISDMKTCI 617

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* Length = 69

 Score = 42.9 bits (101), Expect = 3e-06
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 17 CEDINECLELSNQCAFRCHNVPGS-FRCICPYGYALAPDGRHCIDINEC 64
           +D   C+  +  C   C +  G+   C C  GY+L  DG  C    E 
Sbjct: 2  KDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 50

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* Length = 69

 Score = 41.3 bits (97), Expect = 1e-05
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 57  HCIDINECKENEGICEDGKCINIAGG-VTCECPEGFMLSPNGMKCIDVRQDVC 108
           H  D   C    G CE   C +  G   +C C EG+ L  +G+ C    +  C
Sbjct: 1   HKDDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC 52

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Length = 318

 Score = 45.8 bits (108), Expect = 4e-06
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 23  CLELSNQCAFRCHNVPGS--FRCICPYGYALAPDGRHCIDINEC 64
           C   +  C+  C   P    ++C CP G  L  +G+ C D N  
Sbjct: 270 CGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGNSH 313

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 44.3 bits (105), Expect = 4e-06
 Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 19/87 (21%)

Query: 17  CEDINECLELSNQCA---------FRCHNVPGSFRCICPYGYALAPDGRHC-IDINECKE 66
                 C    N C              +    + C CP G+     G HC  +INEC+ 
Sbjct: 49  PTSAGPCT--PNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFN----GIHCQHNINECEV 102

Query: 67  NEGICE-DGKCINIAGGVTCECPEGFM 92
               C+  G C ++    +CECP  FM
Sbjct: 103 EP--CKNGGICTDLVANYSCECPGEFM 127

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 10/57 (17%)

Query: 15  ETCE-DINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC-IDINECKEN 67
             C+ +INEC      C     C ++  ++ C CP  +     GR+C         +
Sbjct: 91  IHCQHNINECE--VEPCKNGGICTDLVANYSCECPGEFM----GRNCQYKGGGHHHH 141

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Length = 628

 Score = 42.5 bits (99), Expect = 8e-05
 Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 1/68 (1%)

Query: 1   MSTTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVP-GSFRCICPYGYALAPDGRHCI 59
           ++    +   +         + C + +  C+  C     G+ RC CP    L  D   C 
Sbjct: 560 IAQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCG 619

Query: 60  DINECKEN 67
                  +
Sbjct: 620 GTKHHHHH 627

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Length = 628

 Score = 39.8 bits (92), Expect = 5e-04
 Identities = 18/91 (19%), Positives = 26/91 (28%), Gaps = 5/91 (5%)

Query: 27  SNQCAFRCHNVPGSFRCICPYGY-----ALAPDGRHCIDINECKENEGICEDGKCINIAG 81
           S +   R +   G  R I           L          NEC  + G C         G
Sbjct: 226 SRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVG 285

Query: 82  GVTCECPEGFMLSPNGMKCIDVRQDVCYDSY 112
           G  C CP  + L+ +   C      + +   
Sbjct: 286 GFVCGCPAHYSLNADNRTCSAPTTFLLFSQK 316

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Length = 285

 Score = 41.7 bits (97), Expect = 1e-04
 Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 5/73 (6%)

Query: 18 EDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDG- 74
               C    +QC+    C +    F C C   Y    +GR C+     +   G  +   
Sbjct: 3  LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG--NGRQCVAEGSPQRVNGKVKGRI 60

Query: 75 KCINIAGGVTCEC 87
             +    V  E 
Sbjct: 61 FVGSSQVPVVFEN 73

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 16  TCEDINECLELSNQ---CAFRCHNVPGSFRCICPYGYALAPDGRHCIDIN 62
             EDI+EC     +   C   CHN  G F C C  GY L  + R C + +
Sbjct: 120 AAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQS 169

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	245
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.78
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.76
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.71
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.66
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.66
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.66
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.65
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.62
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.62
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.59
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.58
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.58
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.58
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.55
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.54
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.54
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.54
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.53
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.49
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.48
2vh0_B	134	Activated factor XA light chain; serine protease,	99.48
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.46
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.45
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.44
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.41
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.4
3v65_B	386	Low-density lipoprotein receptor-related protein;	99.38
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	99.33
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.3
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.24
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.21
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	99.2
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.18
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.17
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.16
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.14
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	99.11
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.1
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.08
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.06
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.01
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.97
2vh0_B	134	Activated factor XA light chain; serine protease,	98.93
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.92
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.91
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.91
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.9
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.88
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.88
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.87
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.83
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.8
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.79
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.77
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.75
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.71
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.67
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	98.66
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.65
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.64
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.61
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	98.59
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.51
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.47
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.45
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.41
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	98.3
2wph_E	59	Coagulation factor IXA light chain; serine proteas	98.27
1apj_A	74	Fibrillin; microfibril, TB module, marfan syndrome	98.21
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	98.17
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.16
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.06
2wph_E	59	Coagulation factor IXA light chain; serine proteas	98.06
1szb_A	170	Mannose binding lectin-associated serine protease-	98.05
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	98.03
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	98.0
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.99
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	97.93
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.93
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.76
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.74
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.74
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.71
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.69
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.69
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.66
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.57
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.54
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.54
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	97.52
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.41
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.4
1nzi_A	159	Complement C1S component; calcium, innate immunity	97.38
1szb_A	170	Mannose binding lectin-associated serine protease-	97.33
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.25
1ksq_A	75	Latent transforming growth factor beta binding pro	97.21
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.19
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.15
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.0
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.97
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	96.9
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	96.78
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.75
3dem_A	278	Complement factor MAsp-3; complement system, innat	96.71
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.7
1ob1_C	99	Major merozoite surface protein; immune system, im	96.65
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.59
1ob1_C	99	Major merozoite surface protein; immune system, im	96.54
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	96.52
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	96.48
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	96.46
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.38
1nzi_A	159	Complement C1S component; calcium, innate immunity	96.35
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	96.26
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.11
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	96.08
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	96.06
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.01
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	95.9
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	95.72
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.45
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	95.38
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	95.28
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	95.13
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	94.96
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	94.96
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	94.78
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	92.96
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	92.48
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	92.43
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	92.4
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	92.31
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	91.72
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	91.44
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	91.44
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	91.43
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	91.32
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	90.99
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	90.37
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	89.37
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	89.26
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	89.12
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	89.0
3dem_A	278	Complement factor MAsp-3; complement system, innat	88.4
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	88.02
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	87.68
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	87.49
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	87.35
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	87.15
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	85.39
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	84.08
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	83.47
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	83.43
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	83.25
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	81.96
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	80.53

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.78  E-value=6.1e-20  Score=146.59  Aligned_cols=132  Identities=25%  Similarity=0.493  Sum_probs=105.5

Q ss_pred             CccccCCCCee-CCCccccccccC----CCCCCCCCeeeeCC-----CCceEeCCCCceeCCCCCeeEeccccccCCCCC
Q psy11798          2 STTMSVTGYRL-RVETCEDINECL----ELSNQCAFRCHNVP-----GSFRCICPYGYALAPDGRHCIDINECKENEGIC   71 (245)
Q Consensus         2 ~~C~C~~G~~~-~g~~C~dideC~----~~p~~c~~~C~n~~-----gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C   71 (245)
                      .+|.|++||++ ++..|+++|+|.    ..|+..+++|++..     ++|+|.|++||++..  ..|+ +++|...+  |
T Consensus        25 ~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~--~~C~-~d~C~~~~--C   99 (186)
T 1z1y_A           25 FXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE--DTCV-LDVCQYXN--C   99 (186)
T ss_dssp             EEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET--TEEE-EGGGTTCC--C
T ss_pred             eEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC--CCCC-CCcCcCCC--C
Confidence            47999999997 577999999998    44544478999999     899999999999542  2566 89998765  9


Q ss_pred             C-CCeEe----ecCCcceecCCCCceeCC-CCCceeecCcccccCCCcccCc-cCCc--cCCCCCceEecCCCccCCCCC
Q psy11798         72 E-DGKCI----NIAGGVTCECPEGFMLSP-NGMKCIDVRQDVCYDSYQEGTC-TLLR--KQPITVKECCCSMGQAWGRYC  142 (245)
Q Consensus        72 ~-~~~C~----~~~g~~~C~C~~g~~l~~-~g~~C~~~~~~~C~~~~~~~~C-~~~~--~~~~~~~~C~C~~G~~~G~~C  142 (245)
                      . ++.|+    ++.++|.|.|++||.+.. ++..|+++++++|.     .+| .+..  ++..++|+|.|++||. |..|
T Consensus       100 ~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-----~~C~~~~~~C~n~~g~y~C~C~~G~~-g~~~  173 (186)
T 1z1y_A          100 GESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ-----LXCNTDNEVCXNVEGVYXCQCMEGFT-FDXE  173 (186)
T ss_dssp             CTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC-----CCCCTTTEEEEEETTEEEEEECTTCE-EETT
T ss_pred             CCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc-----ccccccCcceecCCCCeeeECCCCCc-cCcc
Confidence            8 67998    888899999999997654 66889876444482     378 5554  7888999999999998 6666


Q ss_pred             cc
Q psy11798        143 LP  144 (245)
Q Consensus       143 ~~  144 (245)
                      +.
T Consensus       174 ~~  175 (186)
T 1z1y_A          174 XN  175 (186)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.76  E-value=3.8e-18  Score=129.27  Aligned_cols=111  Identities=33%  Similarity=0.797  Sum_probs=92.6

Q ss_pred             cccccccCC--CCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE-eccccccCCCCCC-CCeEeecCCcceecCCCCce
Q psy11798         17 CEDINECLE--LSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI-DINECKENEGICE-DGKCINIAGGVTCECPEGFM   92 (245)
Q Consensus        17 C~dideC~~--~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~   92 (245)
                      |+|||||..  +|+..+++|++..++|+|.|++||+    |..|+ ++++|...+  |. ++.|++..++|.|.|++|| 
T Consensus         2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~----G~~C~~~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~-   74 (135)
T 2vj3_A            2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCEIDVNECVSNP--CQNDATCLDQIGEFQCICMPGY-   74 (135)
T ss_dssp             -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSCEECCTTTTCC--CCSSCEEEECSSCEEEECCTTE-
T ss_pred             CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCc----CCcccccCccCCCCC--CCCCCEEeCCCCCceeeCCCCC-
Confidence            679999984  4544478999999999999999999    88895 899998755  87 5799999999999999999 


Q ss_pred             eCCCCCcee-ecCcccccCCCcccCccCCc--cCCCCCceEecCCCccCCCCCcc
Q psy11798         93 LSPNGMKCI-DVRQDVCYDSYQEGTCTLLR--KQPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus        93 l~~~g~~C~-~~~~~~C~~~~~~~~C~~~~--~~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                         .+..|. ++++  |    ...+|.+.+  .+..++|.|.|++||. |..|+.
T Consensus        75 ---~G~~C~~~~~~--C----~~~~C~~~g~C~~~~g~~~C~C~~G~~-G~~C~~  119 (135)
T 2vj3_A           75 ---EGVHCEVNTDE--C----ASSPCLHNGRCLDKINEFQCECPTGFT-GHLCQV  119 (135)
T ss_dssp             ---ESSSSCEECCT--T----TTCCSTTTCEEEECSSCEEEECCTTEE-SSSSCE
T ss_pred             ---cCCcceecCCc--c----cCCCcCCCCEeECCCCCeEEECCCCCc-CCccCc
Confidence               577784 6666  8    346787765  7788999999999999 988863

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.71  E-value=1.7e-17  Score=126.82  Aligned_cols=104  Identities=29%  Similarity=0.619  Sum_probs=86.6

Q ss_pred             CccccCCCCeeC-------CCccccccccCCC---CCCCCCeeeeCCCCceEeCCCCceeCCC--------CCeeEeccc
Q psy11798          2 STTMSVTGYRLR-------VETCEDINECLEL---SNQCAFRCHNVPGSFRCICPYGYALAPD--------GRHCIDINE   63 (245)
Q Consensus         2 ~~C~C~~G~~~~-------g~~C~dideC~~~---p~~c~~~C~n~~gsy~C~C~~Gy~~~~~--------g~~C~~~~e   63 (245)
                      .+|.|++||++.       +..|+++|||...   ++..+++|+++.++|+|.|++||++...        +..|++++|
T Consensus        19 ~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dide   98 (143)
T 2bou_A           19 TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDE   98 (143)
T ss_dssp             SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCH
T ss_pred             CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccC
Confidence            479999999962       4789999999875   4444689999999999999999997643        347999999


Q ss_pred             cccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCceeecCc
Q psy11798         64 CKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQ  105 (245)
Q Consensus        64 C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~  105 (245)
                      |...++.|. ++.|+++.++|.|.|++||.+...++.|..+++
T Consensus        99 C~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~  141 (143)
T 2bou_A           99 CSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTV  141 (143)
T ss_dssp             HHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTTCC
T ss_pred             ccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCccCCc
Confidence            986556698 579999999999999999988777777766655

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.66  E-value=5.6e-17  Score=126.53  Aligned_cols=115  Identities=29%  Similarity=0.579  Sum_probs=84.3

Q ss_pred             ccccccCC-CCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccc--cccCCCCCC---CCeEeecCC----cceecC
Q psy11798         18 EDINECLE-LSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINE--CKENEGICE---DGKCINIAG----GVTCEC   87 (245)
Q Consensus        18 ~dideC~~-~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~e--C~~~~~~C~---~~~C~~~~g----~~~C~C   87 (245)
                      +|||||.. +|+. +++|+|++++|+|.|++||++.++++.|+++++  |...+..|.   ++.|++..+    +|.|.|
T Consensus         1 ~dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C   79 (162)
T 1uzk_A            1 TDVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC   79 (162)
T ss_dssp             CCCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred             CccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence            47999984 5543 789999999999999999999999999999887  875443342   457887766    566666


Q ss_pred             CCCc---------------------------eeCCCCCceeecCcccccCCCcccCccCCc-cCCCCCceEecCCCcc
Q psy11798         88 PEGF---------------------------MLSPNGMKCIDVRQDVCYDSYQEGTCTLLR-KQPITVKECCCSMGQA  137 (245)
Q Consensus        88 ~~g~---------------------------~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~-~~~~~~~~C~C~~G~~  137 (245)
                      ++||                           .+...+..|++|+|  |..  ..++|.+.. +|..++|+|.|++||.
T Consensus        80 ~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dide--C~~--~~~~C~~g~C~n~~gsy~C~C~~Gy~  153 (162)
T 1uzk_A           80 SLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDE--CQE--LPGLCQGGKCINTFGSFQCRCPTGYY  153 (162)
T ss_dssp             TTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCH--HHH--CGGGGBTSEEEECSSCEEEECCTTCC
T ss_pred             CCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCcccc--ccC--CCCCcCCCEeEcCCCCEEeeCCCCcc
Confidence            6655                           43334456788888  843  346787633 8999999999999996

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.66  E-value=1.6e-16  Score=120.23  Aligned_cols=101  Identities=35%  Similarity=0.809  Sum_probs=81.3

Q ss_pred             CccccCCCCeeCCCccc-cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE-eccccccCCCCCC-CCeEee
Q psy11798          2 STTMSVTGYRLRVETCE-DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI-DINECKENEGICE-DGKCIN   78 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~-dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-~~~eC~~~~~~C~-~~~C~~   78 (245)
                      .+|.|++||+  |..|+ ++++|..+|+..+++|++..++|+|.|++||+    |..|+ ++++|...+  |. ++.|++
T Consensus        28 ~~C~C~~Gy~--G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~~~~C~~~~--C~~~g~C~~   99 (135)
T 2vj3_A           28 FECQCLQGYT--GPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYE----GVHCEVNTDECASSP--CLHNGRCLD   99 (135)
T ss_dssp             EEEECCTTEE--STTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEE----SSSSCEECCTTTTCC--STTTCEEEE
T ss_pred             EEEECCCCCc--CCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCc----CCcceecCCcccCCC--cCCCCEeEC
Confidence            3799999999  88998 99999988877789999999999999999999    88896 899998755  88 579999


Q ss_pred             cCCcceecCCCCceeCCCCCcee-ecCcccccCCCcccCcc
Q psy11798         79 IAGGVTCECPEGFMLSPNGMKCI-DVRQDVCYDSYQEGTCT  118 (245)
Q Consensus        79 ~~g~~~C~C~~g~~l~~~g~~C~-~~~~~~C~~~~~~~~C~  118 (245)
                      ..++|.|.|++||    .|..|+ ++++  |..  ..++|.
T Consensus       100 ~~g~~~C~C~~G~----~G~~C~~~i~~--C~~--~~~~c~  132 (135)
T 2vj3_A          100 KINEFQCECPTGF----TGHLCQVDLHH--ILD--AQKMVW  132 (135)
T ss_dssp             CSSCEEEECCTTE----ESSSSCEECC--------------
T ss_pred             CCCCeEEECCCCC----cCCccCccCcc--ccC--CCccee
Confidence            9999999999999    578884 6777  843  444454

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.66  E-value=1.6e-16  Score=110.91  Aligned_cols=83  Identities=41%  Similarity=0.905  Sum_probs=71.6

Q ss_pred             ccccccCCCCCCC-CCeeeeCCCCceEeCCCCceeCC-CCCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCC
Q psy11798         18 EDINECLELSNQC-AFRCHNVPGSFRCICPYGYALAP-DGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSP   95 (245)
Q Consensus        18 ~dideC~~~p~~c-~~~C~n~~gsy~C~C~~Gy~~~~-~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~   95 (245)
                      +|||||..+|..| .++|+|++++|+|.|++||++.. +++.|+++|||...+..|.++.|+++.++|.|.|++||.+..
T Consensus         1 ~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~   80 (86)
T 1lmj_A            1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP   80 (86)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCS
T ss_pred             CccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCC
Confidence            3799999888667 46999999999999999999763 478899999999877667767999999999999999998776


Q ss_pred             CCCce
Q psy11798         96 NGMKC  100 (245)
Q Consensus        96 ~g~~C  100 (245)
                      +++.|
T Consensus        81 ~~~~C   85 (86)
T 1lmj_A           81 NISAC   85 (86)
T ss_dssp             SSCCC
T ss_pred             CCCcc
Confidence            66655

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.65  E-value=5.6e-16  Score=143.26  Aligned_cols=119  Identities=29%  Similarity=0.635  Sum_probs=95.8

Q ss_pred             cccccCCCCCCCCCeeeeCCC-CceE-eCCCCceeCCCCCeeEeccccccCCCCCC-CC---eEeecCCcceec-CCCCc
Q psy11798         19 DINECLELSNQCAFRCHNVPG-SFRC-ICPYGYALAPDGRHCIDINECKENEGICE-DG---KCINIAGGVTCE-CPEGF   91 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~g-sy~C-~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~-~~---~C~~~~g~~~C~-C~~g~   91 (245)
                      +|+||.++||..+++|++..+ +|+| .|++||+  .+++.|++++||...++.|. ++   .|+++.++|+|. |++||
T Consensus         2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~Gyt--Gdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy   79 (634)
T 1yo8_A            2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFL--GNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRY   79 (634)
T ss_dssp             --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBC--SCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTE
T ss_pred             cccccCCCCCCCCCEEecCCCCCeECCcCCCccC--CCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCc
Confidence            689999888777889999985 5999 9999998  23588999999998777798 45   799999999998 99999


Q ss_pred             eeCC-----------CCCceeecCcccccCCCcccCccCCc--cCCC----CCceEecCCCcc-CCCCCc
Q psy11798         92 MLSP-----------NGMKCIDVRQDVCYDSYQEGTCTLLR--KQPI----TVKECCCSMGQA-WGRYCL  143 (245)
Q Consensus        92 ~l~~-----------~g~~C~~~~~~~C~~~~~~~~C~~~~--~~~~----~~~~C~C~~G~~-~G~~C~  143 (245)
                      ....           .++.|+++++  |..  ..++|.+.+  .+..    ++|+|.|++||. .|..|+
T Consensus        80 ~G~~c~g~g~~~~~~dg~~C~dide--C~~--~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce  145 (634)
T 1yo8_A           80 RGNQPVGVGLEAAKTEKQVCEPENP--CKD--KTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG  145 (634)
T ss_dssp             EECCCEESSSHHHHSCCCCEEECCT--TTT--TCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred             ccCccccccccccccCCCccccccc--ccC--CCcccccCccccccccccccceeeeccCCccccCcccc
Confidence            7543           3456888888  843  356788665  6666    899999999995 347886

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.62  E-value=1.5e-15  Score=140.48  Aligned_cols=123  Identities=26%  Similarity=0.604  Sum_probs=97.1

Q ss_pred             Ccc-ccCCCCeeCCCccccccccCCCCCCC--CC---eeeeCCCCceEe-CCCCceeCC-----------CCCeeEeccc
Q psy11798          2 STT-MSVTGYRLRVETCEDINECLELSNQC--AF---RCHNVPGSFRCI-CPYGYALAP-----------DGRHCIDINE   63 (245)
Q Consensus         2 ~~C-~C~~G~~~~g~~C~dideC~~~p~~c--~~---~C~n~~gsy~C~-C~~Gy~~~~-----------~g~~C~~~~e   63 (245)
                      .+| .|++||++++..|++++||..+|..|  ++   +|+++.++|+|. |++||++..           +++.|++++|
T Consensus        25 y~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dide  104 (634)
T 1yo8_A           25 WSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENP  104 (634)
T ss_dssp             EEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCT
T ss_pred             eECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCccccccc
Confidence            479 99999997779999999999888556  55   899999999998 999999653           3456999999


Q ss_pred             cccCCCCCC-CCeEeecC----CcceecCCCCceeCCCCCcee---ecCcccccCCCcccCccCCccCCCCCceEe---c
Q psy11798         64 CKENEGICE-DGKCINIA----GGVTCECPEGFMLSPNGMKCI---DVRQDVCYDSYQEGTCTLLRKQPITVKECC---C  132 (245)
Q Consensus        64 C~~~~~~C~-~~~C~~~~----g~~~C~C~~g~~l~~~g~~C~---~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~---C  132 (245)
                      |...++.|. ++.|+++.    ++|.|.|++||..  .+..|+   ++++  |..  ....|...     ++|.|.   |
T Consensus       105 C~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce~d~DiDe--C~~--~~~~C~~~-----~~y~C~~dnC  173 (634)
T 1yo8_A          105 CKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG--DGLICGEDSDLDG--WPN--LNLVCATN-----ATYHCIKDNC  173 (634)
T ss_dssp             TTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE--SSSSEEECTTSSS--SCS--SCCTTTTT-----CSSSCSCCSS
T ss_pred             ccCCCcccccCccccccccccccceeeeccCCccc--cCcccccccCccc--ccC--CCCcccCC-----CCcccccccc
Confidence            987656698 56999998    9999999999964  567895   4555  733  45667632     456665   6


Q ss_pred             CCC
Q psy11798        133 SMG  135 (245)
Q Consensus       133 ~~G  135 (245)
                      +.+
T Consensus       174 ~~~  176 (634)
T 1yo8_A          174 PHL  176 (634)
T ss_dssp             TTS
T ss_pred             ccc
Confidence            643

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.62  E-value=5.5e-16  Score=118.26  Aligned_cols=107  Identities=29%  Similarity=0.688  Sum_probs=84.1

Q ss_pred             cccCCCCCCCCCeeeeCC--CCceEeCCCCceeCCCCCeeEe-------------ccccccCCCCCC-CCeEe-------
Q psy11798         21 NECLELSNQCAFRCHNVP--GSFRCICPYGYALAPDGRHCID-------------INECKENEGICE-DGKCI-------   77 (245)
Q Consensus        21 deC~~~p~~c~~~C~n~~--gsy~C~C~~Gy~~~~~g~~C~~-------------~~eC~~~~~~C~-~~~C~-------   77 (245)
                      |+|.++|+..+++|++..  ++|.|.|++||+    |+.|++             +++|...+  |. ++.|+       
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~----G~~C~~~~~~~~~~~~c~~~~~C~~~~--C~~~g~C~~~~~~~~   74 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCECPDGFT----DPNCSSVVEVASDEEEPTSAGPCTPNP--CHNGGTCEISEAYRG   74 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEECCTTCC----TTTTCSCCCCTTTTTSCCCCCTTSSCC--CCTTCEEEECCCEET
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCC----CCCCccCccccccccccccCCcCCCCC--CCCCCEecCCCcccc
Confidence            578888877789999876  689999999998    766754             56676544  87 57999       


Q ss_pred             ecCCcceecCCCCceeCCCCCcee-ecCcccccCCCcccCccCCc--cCCCCCceEecCCCccCCCCCcc
Q psy11798         78 NIAGGVTCECPEGFMLSPNGMKCI-DVRQDVCYDSYQEGTCTLLR--KQPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus        78 ~~~g~~~C~C~~g~~l~~~g~~C~-~~~~~~C~~~~~~~~C~~~~--~~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      ++.++|.|.|++||    .+..|+ ++++  |    ...+|.+..  ++..++|+|.|++||. |..|+.
T Consensus        75 ~~~~~~~C~C~~G~----~G~~C~~~i~~--C----~~~~C~~~~~C~~~~g~~~C~C~~G~~-G~~c~~  133 (143)
T 4d90_A           75 DTFIGYVCKCPRGF----NGIHCQHNINE--C----EVEPCKNGGICTDLVANYSCECPGEFM-GRNCQY  133 (143)
T ss_dssp             TEECCEEEECCTTE----ESTTSCEECCT--T----TTCCSCTTCEEEEETTEEEEECCTTCB-STTSCB
T ss_pred             CCCCCeEeECcCCC----cCCCcccCCCc--C----CCCCCCCCCEeECCCCCeEeECCCCCc-cCCcee
Confidence            67789999999999    688896 8887  8    346787765  7888999999999999 888864

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.59  E-value=3.4e-15  Score=103.13  Aligned_cols=77  Identities=42%  Similarity=0.975  Sum_probs=64.5

Q ss_pred             ccccccccCC-CCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeC
Q psy11798         16 TCEDINECLE-LSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLS   94 (245)
Q Consensus        16 ~C~dideC~~-~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~   94 (245)
                      .|+|||||.. +|+. +++|+|+.++|+|.|++||++  +|+.|+++|||.. ...|.++.|+++.++|.|.|++||.+.
T Consensus         1 sC~dideC~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~--~g~~C~dideC~~-~~~C~~~~C~n~~g~y~C~C~~G~~g~   76 (82)
T 1emn_A            1 SAVDMDECKEPDVCK-HGQCINTDGSYRCECPFGYIL--AGNECVDTDECSV-GNPCGNGTCKNVIGGFECTCEEGFEPG   76 (82)
T ss_dssp             CCCCCCSSSSTTSCS-SSEECCCSSCCCEECCTTEEE--ETTEEEECCGGGT-CCTTSSSCEEECSSSEEECCSSSSCCC
T ss_pred             CCCccccCCCCCCcC-CCEEEecCCCEEEECCCCeEC--CCCccCCcccccC-CCCCCCCEeECCCCCEEeECCCCeEeC
Confidence            4789999986 4433 579999999999999999986  4789999999984 244886799999999999999999765


Q ss_pred             CC
Q psy11798         95 PN   96 (245)
Q Consensus        95 ~~   96 (245)
                      ..
T Consensus        77 ~~   78 (82)
T 1emn_A           77 PM   78 (82)
T ss_dssp             SS
T ss_pred             CC
Confidence            44

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.58  E-value=1.3e-15  Score=106.55  Aligned_cols=83  Identities=41%  Similarity=0.947  Sum_probs=70.7

Q ss_pred             ccccccCCCCCCC-CCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecC--CCCceeC
Q psy11798         18 EDINECLELSNQC-AFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCEC--PEGFMLS   94 (245)
Q Consensus        18 ~dideC~~~p~~c-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C--~~g~~l~   94 (245)
                      +|||||..+|..| +++|+|++++|+|.|++||++.++++.|++++||...+  |. +.|+++.++|.|.|  ..||.+.
T Consensus         1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~--C~-~~C~n~~g~y~C~C~g~~G~~~~   77 (87)
T 1z6c_A            1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENM--CA-QLCVNYPGGYTCYCDGKKGFKLA   77 (87)
T ss_dssp             CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSC--CS-SEECCCSSSCCEECCSSSCCBCC
T ss_pred             CccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCC--CC-CEEEccCCCEEEECCCCcCCccc
Confidence            3789999888656 78999999999999999999988899999999998654  87 59999999999999  4777666


Q ss_pred             CCCCceeec
Q psy11798         95 PNGMKCIDV  103 (245)
Q Consensus        95 ~~g~~C~~~  103 (245)
                      .++..|++|
T Consensus        78 ~~~~~C~di   86 (87)
T 1z6c_A           78 QDQKSCEVV   86 (87)
T ss_dssp             TTSSSCBCC
T ss_pred             CCCCcceEC
Confidence            666666554

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.58  E-value=2.1e-15  Score=115.54  Aligned_cols=89  Identities=24%  Similarity=0.566  Sum_probs=74.2

Q ss_pred             CccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeE-eecCCcceecCCCCcee
Q psy11798         15 ETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKC-INIAGGVTCECPEGFML   93 (245)
Q Consensus        15 ~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C-~~~~g~~~C~C~~g~~l   93 (245)
                      ..|.|+|+|.++|+..+++|++..++|.|.|++||+    |+.|+++|+|...++.|.+ .| +++.++|.|.|++||.+
T Consensus        43 ~~c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l  117 (146)
T 1x7a_L           43 KQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRL  117 (146)
T ss_dssp             -------CCSSCSSCTTCEEEECSSCEEEECCSSEE----STTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEE
T ss_pred             ccCCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCc----CCcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEe
Confidence            468999999998877789999999999999999999    8899999999876666877 89 99999999999999999


Q ss_pred             CCCCCceeecCcccc
Q psy11798         94 SPNGMKCIDVRQDVC  108 (245)
Q Consensus        94 ~~~g~~C~~~~~~~C  108 (245)
                      ..+++.|.++++.+|
T Consensus       118 ~~dG~~C~~~~~~pC  132 (146)
T 1x7a_L          118 APDQKSCKPAVPFPC  132 (146)
T ss_dssp             CTTSSSEEECSSSCT
T ss_pred             CCCCCcCCCCCCCCC
Confidence            889999998877556

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.58  E-value=2.1e-15  Score=111.40  Aligned_cols=105  Identities=30%  Similarity=0.815  Sum_probs=80.2

Q ss_pred             ccccccCCCCCCCCCeeeeC-CCCceEeCCCCceeCCCCCeeEecccccc--CCCCCCCCeEeecCCcceecCCCCceeC
Q psy11798         18 EDINECLELSNQCAFRCHNV-PGSFRCICPYGYALAPDGRHCIDINECKE--NEGICEDGKCINIAGGVTCECPEGFMLS   94 (245)
Q Consensus        18 ~dideC~~~p~~c~~~C~n~-~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~--~~~~C~~~~C~~~~g~~~C~C~~g~~l~   94 (245)
                      +|||||.++|  |.++|+++ .++|+|.|++||++...     ++++|..  ..+.|. +.|++ .++|.|.|++||.+.
T Consensus         2 ~dideC~~~p--C~~~C~~~~~g~y~C~C~~Gy~g~~~-----~~~~C~~~C~~~~C~-~~C~~-~~~y~C~C~~Gy~~~   72 (118)
T 1dx5_I            2 EPVDPCFRAN--CEYQCQPLDQTSYLCVCAEGFAPIPH-----EPHRCQMFCNQTACP-ADCDP-NTQASCECPEGYILD   72 (118)
T ss_dssp             CCCCGGGGCC--CSSEEEECSSSCEEEECCTTEEEETT-----EEEEEEECCCSSEEE-CEECT-TSTTCEECCTTEEEE
T ss_pred             CccccCCCCC--CCCCCCCCCCCCEEeECCCCccccCC-----CCCccccccCCCCCC-CcccC-CCCeEeECCCCccCC
Confidence            4799998766  55699999 99999999999995432     3344432  123365 48888 589999999999776


Q ss_pred             CCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCcc
Q psy11798         95 PNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQA  137 (245)
Q Consensus        95 ~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~  137 (245)
                      . ++.|+++++  |..   .++|....++..++|+|.|++||.
T Consensus        73 ~-g~~C~dide--C~~---~~~C~~~C~n~~g~y~C~C~~G~~  109 (118)
T 1dx5_I           73 D-GFICTDIDE--CEN---GGFCSGVCHNLPGTFECICGPDSA  109 (118)
T ss_dssp             T-TTEEEECCH--HHH---CSSCSSEEEECSSSEEEEECSSSS
T ss_pred             C-CCccccccc--cCC---CCCCcCeEEeCCCCEEEECCCCCc
Confidence            5 889998888  843   267843348899999999999996

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.55  E-value=9.7e-16  Score=119.47  Aligned_cols=99  Identities=30%  Similarity=0.634  Sum_probs=75.3

Q ss_pred             CccccCCCCee--CCCccccccc--cCCCCCCC----CCeeeeCCC----CceEeCCC----------------------
Q psy11798          2 STTMSVTGYRL--RVETCEDINE--CLELSNQC----AFRCHNVPG----SFRCICPY----------------------   47 (245)
Q Consensus         2 ~~C~C~~G~~~--~g~~C~dide--C~~~p~~c----~~~C~n~~g----sy~C~C~~----------------------   47 (245)
                      ++|.|++||++  +|+.|+++++  |...+..|    ++.|++..+    +|.|.|++                      
T Consensus        24 y~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~  103 (162)
T 1uzk_A           24 YICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKIL  103 (162)
T ss_dssp             EEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHH
T ss_pred             EEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeE
Confidence            47999999998  6999999987  87654332    677888765    56666655                      


Q ss_pred             -----CceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         48 -----GYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        48 -----Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                           ||++.++++.|++||||...++.|.++.|+++.++|+|.|++||.+..+++.|
T Consensus       104 C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C  161 (162)
T 1uzk_A          104 CPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC  161 (162)
T ss_dssp             CTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred             CCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCcc
Confidence                 55554555678999999876667987799999999999999999888777776

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.54  E-value=1.2e-15  Score=116.96  Aligned_cols=114  Identities=28%  Similarity=0.534  Sum_probs=81.6

Q ss_pred             ccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEecc-----------ccccCCCCCC-CCeEeecCCc---
Q psy11798         18 EDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDIN-----------ECKENEGICE-DGKCINIAGG---   82 (245)
Q Consensus        18 ~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~-----------eC~~~~~~C~-~~~C~~~~g~---   82 (245)
                      +|||||.++|+. +++|+|++++|+|.|++||++...++.|++++           .|......|. ...|.+..++   
T Consensus         2 ~dideC~~~pC~-ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g   80 (147)
T 2w86_A            2 ADIDECESSPCI-NGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWG   80 (147)
T ss_dssp             CCCCGGGGCCSB-TSEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEET
T ss_pred             CcCccCcCCCCC-CCEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccC
Confidence            379999988865 47999999999999999999887777787643           1221111111 0122233332   


Q ss_pred             -------ceecCCCCceeCCCCCceeecCcccccCCCcccCccCCc-cCCCCCceEecCCCcc
Q psy11798         83 -------VTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR-KQPITVKECCCSMGQA  137 (245)
Q Consensus        83 -------~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~-~~~~~~~~C~C~~G~~  137 (245)
                             |.|.|++||++. .++.|+++++  |..  ..+.|.+.. +|..++|+|.|++||.
T Consensus        81 ~~C~~c~~~C~C~~Gy~~~-~g~~C~dide--C~~--~~~~C~~g~C~n~~g~y~C~C~~Gy~  138 (147)
T 2w86_A           81 SPCTLCQVDPICGKGYSRI-KGTQCEDIDE--CEV--FPGVCKNGLCVNTRGSFKCQCPSGMT  138 (147)
T ss_dssp             TTTEECCCCTTTCTTEEEE-ETTEEEECCH--HHH--STTCSSSSEEEEETTEEEEECCTTCC
T ss_pred             CCcccCCCcccCCCccccC-CCCccCcccc--ccC--CCCCCCCCEEECCCCCEEeeCCCCCc
Confidence                   788999999652 5889998888  843  355687643 8899999999999996

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.54  E-value=3e-15  Score=108.61  Aligned_cols=88  Identities=35%  Similarity=0.925  Sum_probs=42.1

Q ss_pred             CCCCeeCCCccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceec
Q psy11798          7 VTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCE   86 (245)
Q Consensus         7 ~~G~~~~g~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~   86 (245)
                      ..||.  +..| ++|||..++..|.++|++..++|.|.|++||++. +++.|+++|||.. +..|. +.|+++.++|.|.
T Consensus        19 ~~~~~--~~~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~-~~~C~-~~C~n~~gsy~C~   92 (107)
T 2w2n_E           19 ENLYF--QGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQD-PDTCS-QLCVNLEGGYKCQ   92 (107)
T ss_dssp             -CCCC--SCCB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEEEC--------------------------
T ss_pred             CCCcC--CCCC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCccccccccCC-CCCcC-CeeecCCCCEEEE
Confidence            35666  7788 7999987767788899999999999999999964 4689999999974 34586 5999999999999


Q ss_pred             CCCCceeCCCCCce
Q psy11798         87 CPEGFMLSPNGMKC  100 (245)
Q Consensus        87 C~~g~~l~~~g~~C  100 (245)
                      |++||.+..+++.|
T Consensus        93 C~~Gy~~~~d~~~C  106 (107)
T 2w2n_E           93 CEEGFQLDPHTKAC  106 (107)
T ss_dssp             --------------
T ss_pred             CCCCceECCCCCcc
Confidence            99999877666655

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.54  E-value=1e-14  Score=111.17  Aligned_cols=88  Identities=28%  Similarity=0.733  Sum_probs=75.3

Q ss_pred             CccccCCCCeeCCCcccc-------------ccccCCCCCCCCCeee-------eCCCCceEeCCCCceeCCCCCeeE-e
Q psy11798          2 STTMSVTGYRLRVETCED-------------INECLELSNQCAFRCH-------NVPGSFRCICPYGYALAPDGRHCI-D   60 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~d-------------ideC~~~p~~c~~~C~-------n~~gsy~C~C~~Gy~~~~~g~~C~-~   60 (245)
                      .+|.|++||+  |..|++             +++|..+|+..+++|+       +..++|.|.|++||.    |+.|+ +
T Consensus        23 ~~C~C~~G~~--G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~----G~~C~~~   96 (143)
T 4d90_A           23 FSCECPDGFT--DPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFN----GIHCQHN   96 (143)
T ss_dssp             CEEECCTTCC--TTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEE----STTSCEE
T ss_pred             EEeECCCCCC--CCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCc----CCCcccC
Confidence            4799999999  777764             5778877777789999       677899999999998    88997 9


Q ss_pred             ccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         61 INECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        61 ~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      +++|...+  |. ++.|+++.++|.|.|++||    .|..|.
T Consensus        97 i~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~----~G~~c~  132 (143)
T 4d90_A           97 INECEVEP--CKNGGICTDLVANYSCECPGEF----MGRNCQ  132 (143)
T ss_dssp             CCTTTTCC--SCTTCEEEEETTEEEEECCTTC----BSTTSC
T ss_pred             CCcCCCCC--CCCCCEeECCCCCeEeECCCCC----ccCCce
Confidence            99998655  88 5799999999999999999    566664

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.53  E-value=1.8e-14  Score=109.85  Aligned_cols=108  Identities=25%  Similarity=0.468  Sum_probs=83.6

Q ss_pred             CCCCCCeeeeCCCCceEeCCCCceeC-----CCCCeeEeccccccCC-CCCC-CCeEeecCCcceecCCCCceeCCC---
Q psy11798         27 SNQCAFRCHNVPGSFRCICPYGYALA-----PDGRHCIDINECKENE-GICE-DGKCINIAGGVTCECPEGFMLSPN---   96 (245)
Q Consensus        27 p~~c~~~C~n~~gsy~C~C~~Gy~~~-----~~g~~C~~~~eC~~~~-~~C~-~~~C~~~~g~~~C~C~~g~~l~~~---   96 (245)
                      ++..+++|++.   |.|.|++||+..     .+++.|+++|+|.... ..|. ++.|+++.++|.|.|++||.+...   
T Consensus         8 ~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~   84 (143)
T 2bou_A            8 WCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKT   84 (143)
T ss_dssp             TCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSC
T ss_pred             cCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccc
Confidence            44457889874   999999999964     3457899999998652 2487 579999999999999999977532   


Q ss_pred             -----CCceeecCcccccCCCcccCccCCc--cCCCCCceEecCCCccCCCCC
Q psy11798         97 -----GMKCIDVRQDVCYDSYQEGTCTLLR--KQPITVKECCCSMGQAWGRYC  142 (245)
Q Consensus        97 -----g~~C~~~~~~~C~~~~~~~~C~~~~--~~~~~~~~C~C~~G~~~G~~C  142 (245)
                           +..|+++++  |..  ..++|.+..  ++..++|+|.|++||. |...
T Consensus        85 ~~~~~~~~C~dide--C~~--~~~~C~~~~~C~n~~g~y~C~C~~Gy~-g~~~  132 (143)
T 2bou_A           85 FKNESENTCQDVDE--CSS--GQHQCDSSTVCFNTVGSYSCRCRPGWK-PRHG  132 (143)
T ss_dssp             BSSGGGCCEEECCH--HHH--TCCCCCTTSEEEECSSCEEEECCSSSC-BCTT
T ss_pred             cccCCCCCcCCccC--ccC--cCCCCCCCCEEECCCCCEEeeCCCCcc-cCCC
Confidence                 457888888  843  346787655  8899999999999997 5443

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.49  E-value=2.2e-14  Score=114.24  Aligned_cols=108  Identities=23%  Similarity=0.528  Sum_probs=82.0

Q ss_pred             CCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccC--CCCCC-CCeEeecC-----CcceecCCCCceeCCC
Q psy11798         25 ELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKEN--EGICE-DGKCINIA-----GGVTCECPEGFMLSPN   96 (245)
Q Consensus        25 ~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~--~~~C~-~~~C~~~~-----g~~~C~C~~g~~l~~~   96 (245)
                      ++|+. +++|++..++|+|.|++||++. ++..|+++++|...  ...|. ++.|+++.     ++|.|.|++||.+.  
T Consensus        10 ~~pC~-ng~C~~~~g~~~C~C~~G~~g~-~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~--   85 (186)
T 1z1y_A           10 DTICX-NGQLVQMSNHFXCMCNEGLVHL-SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLX--   85 (186)
T ss_dssp             TCCCB-TEEEEECSSCEEEEECTTEEEE-ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEE--
T ss_pred             CCCCC-CCEeECCCCCeEeECCCCCccC-CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccC--
Confidence            44444 4599999999999999999954 35689999999843  34588 57999999     89999999999653  


Q ss_pred             CCceeecCcccccCCCcccCccCCc--c----CCCCCceEecCCCcc----CCCCCc
Q psy11798         97 GMKCIDVRQDVCYDSYQEGTCTLLR--K----QPITVKECCCSMGQA----WGRYCL  143 (245)
Q Consensus        97 g~~C~~~~~~~C~~~~~~~~C~~~~--~----~~~~~~~C~C~~G~~----~G~~C~  143 (245)
                      ...|. +++  |.    ..+|.+.+  .    +..++|+|.|++||.    .+..|+
T Consensus        86 ~~~C~-~d~--C~----~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~  135 (186)
T 1z1y_A           86 EDTCV-LDV--CQ----YXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCT  135 (186)
T ss_dssp             TTEEE-EGG--GT----TCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEE
T ss_pred             CCCCC-CCc--Cc----CCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcce
Confidence            23564 555  83    34576544  4    788899999999997    136665

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.48  E-value=1.3e-14  Score=115.78  Aligned_cols=89  Identities=27%  Similarity=0.666  Sum_probs=39.7

Q ss_pred             CccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEe-c-cccccCCCCCCCCeEeecCCcceecCCCCce
Q psy11798         15 ETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID-I-NECKENEGICEDGKCINIAGGVTCECPEGFM   92 (245)
Q Consensus        15 ~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~-~-~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~   92 (245)
                      ..|.|+|+|.++|+..+++|++..++|.|.|++||+    |+.|++ + ++|...++.|.+ .|+++.++|.|.|++||.
T Consensus        37 ~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~  111 (195)
T 1nfu_B           37 NKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYT  111 (195)
T ss_dssp             ------------------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEE
T ss_pred             ccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCce----eccccccccccccCCCCCCCC-EeECCCCCeEEECCCCce
Confidence            468999999998877789999999999999999999    889986 6 899876666877 999999999999999999


Q ss_pred             eCCCCCceeecCcccc
Q psy11798         93 LSPNGMKCIDVRQDVC  108 (245)
Q Consensus        93 l~~~g~~C~~~~~~~C  108 (245)
                      +..++..|.++...+|
T Consensus       112 l~~dG~~C~~~~~~PC  127 (195)
T 1nfu_B          112 LADNGKACIPTGPYPC  127 (195)
T ss_dssp             ECTTSSCEEESSSSCT
T ss_pred             eCCCCCccccCCCCCC
Confidence            9888999987765555

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.48  E-value=1.5e-14  Score=109.20  Aligned_cols=89  Identities=27%  Similarity=0.666  Sum_probs=39.9

Q ss_pred             CccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEe-c-cccccCCCCCCCCeEeecCCcceecCCCCce
Q psy11798         15 ETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID-I-NECKENEGICEDGKCINIAGGVTCECPEGFM   92 (245)
Q Consensus        15 ~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~-~-~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~   92 (245)
                      ..|.++|+|.++|+..+++|++..++|.|.|++||+    |+.|++ + ++|...++.|.+ .|+++.++|.|.|++||.
T Consensus        37 ~~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~  111 (134)
T 2vh0_B           37 NKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYT  111 (134)
T ss_dssp             ------------------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEE
T ss_pred             ccCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCcc----CCccccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcE
Confidence            468899999988877789999999999999999999    889986 6 889876666877 999999999999999999


Q ss_pred             eCCCCCceeecCcccc
Q psy11798         93 LSPNGMKCIDVRQDVC  108 (245)
Q Consensus        93 l~~~g~~C~~~~~~~C  108 (245)
                      +..+++.|.++.+.+|
T Consensus       112 l~~~g~~C~~~~~~pC  127 (134)
T 2vh0_B          112 LADNGKACIPTGPYPC  127 (134)
T ss_dssp             ECTTSSCEEESSSSCT
T ss_pred             ECCCCCccCcCCCcCC
Confidence            8888999988777666

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.46  E-value=6.7e-14  Score=102.67  Aligned_cols=88  Identities=28%  Similarity=0.606  Sum_probs=70.1

Q ss_pred             ccccccccCCCC--------CCCCCeeeeCCCCceEeCCCCceeCCCCCeeEec---cccccCCCCCCCCeEeecCCcce
Q psy11798         16 TCEDINECLELS--------NQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDI---NECKENEGICEDGKCINIAGGVT   84 (245)
Q Consensus        16 ~C~dideC~~~p--------~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~---~eC~~~~~~C~~~~C~~~~g~~~   84 (245)
                      .+.|+|+|..+|        +..+++|++..++|+|.|++||+    |+.|+++   ++|...++.|.+ .|+++.++|.
T Consensus         2 ~~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~----G~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~   76 (114)
T 1aut_L            2 KHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWE----GRFCQREVSFLNCSLDNGGCTH-YCLEEVGWRR   76 (114)
T ss_dssp             ------CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEE----STTSCEECCSSSSSSGGGGCSS-EEEECSSSEE
T ss_pred             cceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCc----CCCcCcCCcCCcCcCCCCCCCC-EeECCCCCEE
Confidence            356889999888        55588999999999999999999    7889865   468765566766 9999999999


Q ss_pred             ecCCCCceeCCCCCceeecCcccc
Q psy11798         85 CECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        85 C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      |.|++||.+..+++.|.++.+.+|
T Consensus        77 C~C~~G~~~~~~g~~C~~~~~~pC  100 (114)
T 1aut_L           77 CSCAPGYKLGDDLLQCHPAVKFPC  100 (114)
T ss_dssp             EECCTTEEECTTSSCEEECSSSCT
T ss_pred             eECCCCeeECCCCCccCcCcccCC
Confidence            999999999889999987766555

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.45  E-value=1.3e-14  Score=107.17  Aligned_cols=87  Identities=29%  Similarity=0.658  Sum_probs=67.2

Q ss_pred             CccccCCCCeeCCCccccccccCC--CCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeec
Q psy11798          2 STTMSVTGYRLRVETCEDINECLE--LSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINI   79 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~dideC~~--~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~   79 (245)
                      .+|.|++||++  ..+ ++++|..  ....|.+.|++ .++|.|.|++||++.. ++.|+++|||.. ++.| ++.|+++
T Consensus        24 y~C~C~~Gy~g--~~~-~~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~-g~~C~dideC~~-~~~C-~~~C~n~   96 (118)
T 1dx5_I           24 YLCVCAEGFAP--IPH-EPHRCQMFCNQTACPADCDP-NTQASCECPEGYILDD-GFICTDIDECEN-GGFC-SGVCHNL   96 (118)
T ss_dssp             EEEECCTTEEE--ETT-EEEEEEECCCSSEEECEECT-TSTTCEECCTTEEEET-TTEEEECCHHHH-CSSC-SSEEEEC
T ss_pred             EEeECCCCccc--cCC-CCCccccccCCCCCCCcccC-CCCeEeECCCCccCCC-CCccccccccCC-CCCC-cCeEEeC
Confidence            47999999996  222 3444432  12235578988 5899999999999876 889999999987 2448 6799999


Q ss_pred             CCcceecCCCCceeCC
Q psy11798         80 AGGVTCECPEGFMLSP   95 (245)
Q Consensus        80 ~g~~~C~C~~g~~l~~   95 (245)
                      .++|.|.|++||.+..
T Consensus        97 ~g~y~C~C~~G~~g~~  112 (118)
T 1dx5_I           97 PGTFECICGPDSALAG  112 (118)
T ss_dssp             SSSEEEEECSSSSCEE
T ss_pred             CCCEEEECCCCCccCC
Confidence            9999999999996543

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.44  E-value=1.8e-13  Score=104.21  Aligned_cols=88  Identities=26%  Similarity=0.630  Sum_probs=74.9

Q ss_pred             ccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEe-ccccc---cCCCCCCCCeEeecCC-cceecCCCC
Q psy11798         16 TCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID-INECK---ENEGICEDGKCINIAG-GVTCECPEG   90 (245)
Q Consensus        16 ~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~-~~eC~---~~~~~C~~~~C~~~~g-~~~C~C~~g   90 (245)
                      .|.|+|+|.++|+..+++|++..++|.|.|++||+    |+.|++ +++|.   ..++.|.+ .|+++.+ +|.|.|++|
T Consensus        43 ~c~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~c~~~~~~C~~-~C~~~~g~~y~C~C~~G  117 (142)
T 2c4f_L           43 SYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEG  117 (142)
T ss_dssp             HHTTCCGGGGCCCCTTCEEEEETTEEEEECCTTEE----STTSCEEGGGCCSTTTGGGGCSS-EEECCTTSCCEEECCTT
T ss_pred             cCCccCcCcCCCcCCCCEEeCCCCCEEeeCCCCcc----CCccccCccccccccCCCCCccC-EeECCCCCCEEEECCCC
Confidence            57899999998877789999999999999999999    889985 67753   22344554 8999999 999999999


Q ss_pred             ceeCCCCCceeecCcccc
Q psy11798         91 FMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        91 ~~l~~~g~~C~~~~~~~C  108 (245)
                      |.+..+++.|.++++.+|
T Consensus       118 y~l~~dG~~C~~~~e~pC  135 (142)
T 2c4f_L          118 YSLLADGVSCTPTVEYPC  135 (142)
T ss_dssp             EEECTTSSCEEESSSSCT
T ss_pred             ceECCCCCCCCCCCccCC
Confidence            999889999998888667

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.41  E-value=1e-13  Score=97.59  Aligned_cols=83  Identities=24%  Similarity=0.509  Sum_probs=68.7

Q ss_pred             CccccCCCCeeCCCccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE--eccccccCCCCCC-CCeEee
Q psy11798          2 STTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI--DINECKENEGICE-DGKCIN   78 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~--~~~eC~~~~~~C~-~~~C~~   78 (245)
                      ++|.|.+||+  |..| ++++|...|      |+|..++|.|.|++||+      .|+  ++++|...|  |. +++|++
T Consensus         2 y~C~C~~g~~--g~~c-~~~~c~~~p------C~n~~~~y~C~C~~G~~------~C~~~~~~~C~~~p--C~ngg~C~~   64 (91)
T 1tpg_A            2 YQVICRDEKT--QMIY-QQHQSWLRP------VLRSNRVEYCWCNSGRA------QCHSVPVKSCSEPR--CFNGGTCQQ   64 (91)
T ss_dssp             CCCCCBCSSS--CCBC-CSSCEEEEE------CSSSSCEEEEECSSSCC------BCCEECEEECSSCC--SCTTCEEEE
T ss_pred             eeeECCCCCc--CCeE-CCCcccCCc------cccCCCCcEeECCCCCc------ccccCcCCcccCCC--CCCCCEeec
Confidence            5899999999  8888 588887655      56678899999999995      585  789998766  98 479999


Q ss_pred             cC--CcceecCCCCceeCCCCCcee-ecCc
Q psy11798         79 IA--GGVTCECPEGFMLSPNGMKCI-DVRQ  105 (245)
Q Consensus        79 ~~--g~~~C~C~~g~~l~~~g~~C~-~~~~  105 (245)
                      ..  ++|.|.|++||    .|+.|+ +++|
T Consensus        65 ~~~~~~~~C~C~~G~----~G~~Ce~~ide   90 (91)
T 1tpg_A           65 ALYFSDFVCQCPEGF----AGKSCEIDTRA   90 (91)
T ss_dssp             ESSSSCEEEECCTTC----BSSSCCBCSSC
T ss_pred             CCCCCCeEeECCCCC----cCCcCCcCCCC
Confidence            87  89999999999    688884 4543

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.40  E-value=2.4e-14  Score=109.79  Aligned_cols=98  Identities=30%  Similarity=0.656  Sum_probs=70.0

Q ss_pred             CccccCCCCee--CCCcccccc-----------ccCCCCCCC--CCeeeeCCCC----------ceEeCCCCceeCCCCC
Q psy11798          2 STTMSVTGYRL--RVETCEDIN-----------ECLELSNQC--AFRCHNVPGS----------FRCICPYGYALAPDGR   56 (245)
Q Consensus         2 ~~C~C~~G~~~--~g~~C~did-----------eC~~~p~~c--~~~C~n~~gs----------y~C~C~~Gy~~~~~g~   56 (245)
                      .+|.|++||++  .+..|.+++           .|......|  ...|.+..++          |.|.|++||++. +|+
T Consensus        24 y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~-~g~  102 (147)
T 2w86_A           24 FICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRI-KGT  102 (147)
T ss_dssp             EEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETTTTEECCCCTTTCTTEEEE-ETT
T ss_pred             EEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCCCcccCCCcccCCCccccC-CCC
Confidence            47999999997  455665432           111100000  1122333332          788999999752 488


Q ss_pred             eeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         57 HCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        57 ~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      .|++||||...++.|.++.|+++.++|+|.|++||.+..+++.|
T Consensus       103 ~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C  146 (147)
T 2w86_A          103 QCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRIC  146 (147)
T ss_dssp             EEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCB
T ss_pred             ccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCee
Confidence            99999999977777987799999999999999999888777776

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=99.38  E-value=1.2e-13  Score=121.83  Aligned_cols=85  Identities=35%  Similarity=0.857  Sum_probs=25.5

Q ss_pred             cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCC
Q psy11798         19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGM   98 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~   98 (245)
                      |+|||..+++.|.+.|.+..++|.|.|++||++.++++.|++++||. .++.|.+ .|+++.++|.|.|++||.+..+++
T Consensus         2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~-~~~~C~~-~C~~~~g~~~C~C~~g~~l~~d~~   79 (386)
T 3v65_B            2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECA-EEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRR   79 (386)
T ss_dssp             ---------------------------------------------------CCTT-EEC-----CCEECCTTEEECTTSS
T ss_pred             CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeC-CcCcccC-cCCCCCCCCeEEECCCceEcCCCC
Confidence            78999998989988999999999999999999999999999999997 3456987 699999999999999999988899


Q ss_pred             ceeecCc
Q psy11798         99 KCIDVRQ  105 (245)
Q Consensus        99 ~C~~~~~  105 (245)
                      .|..+.+
T Consensus        80 ~C~~~~~   86 (386)
T 3v65_B           80 SCKALGP   86 (386)
T ss_dssp             CEEECSS
T ss_pred             eECCccc
Confidence            9976543

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=99.33  E-value=1.7e-12  Score=114.97  Aligned_cols=81  Identities=38%  Similarity=1.001  Sum_probs=71.8

Q ss_pred             cccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         21 NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        21 deC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      |||..+++.|.+.|.|++++|.|.|++||++ .+++.|+++|||.. +..|.+ .|+|+.|+|.|.|++||.+..+++.|
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~-~~~C~~-~C~n~~g~~~C~C~~g~~~~~~~~~C   77 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD-PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKAC   77 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCST-TSSCSS-CCBCCSSSCBCCCCTTCCCCTTTSSC
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhc-cCCCCC-ccCCCccceeeeccccccccccccce
Confidence            6898888889999999999999999999998 57889999999984 456876 89999999999999999988888888


Q ss_pred             eecC
Q psy11798        101 IDVR  104 (245)
Q Consensus       101 ~~~~  104 (245)
                      .++.
T Consensus        78 ~~~~   81 (400)
T 3p5b_L           78 KAVG   81 (400)
T ss_dssp             CCST
T ss_pred             eecc
Confidence            6553

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.30  E-value=1.4e-12  Score=102.15  Aligned_cols=113  Identities=23%  Similarity=0.529  Sum_probs=55.8

Q ss_pred             ccccCCCCeeCCCccccccccCCCCCCC-CCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCC
Q psy11798          3 TTMSVTGYRLRVETCEDINECLELSNQC-AFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAG   81 (245)
Q Consensus         3 ~C~C~~G~~~~g~~C~dideC~~~p~~c-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g   81 (245)
                      .|+|++||+  |..|+. ++|.. .+.+ ++.|.+   +|.|.|++||+    |..|+   +|...+ .|.++.|+   +
T Consensus        51 ~C~C~~G~~--G~~C~~-~~C~~-~C~~~~g~C~~---~~~C~C~~G~~----G~~C~---~C~~~~-~C~~g~C~---~  112 (169)
T 2vj2_A           51 NKTCMEGWM--GPECNR-AICRQ-GCSPKHGSCKL---PGDCRCQYGWQ----GLYCD---KCIPHP-GCVHGICN---E  112 (169)
T ss_dssp             CEEECTTEE--STTSCE-ECCCT-TCCTTTEECSS---TTCCEECTTEE----SSSSC---EECCCT-TCSSEECS---S
T ss_pred             eeECCCCCc--CCCCCC-CCCCC-CCCCCCcccCC---CCeeECCCCCC----CCCcc---cCCCCC-CCCCCCcC---C
Confidence            346666666  555542 23432 2221 344533   45666666666    55553   243221 24444554   4


Q ss_pred             cceecCCCCceeCCCCCcee-ecCcccccCCCcccCccCCc--cCC-CCCceEecCCCccCCCCCc
Q psy11798         82 GVTCECPEGFMLSPNGMKCI-DVRQDVCYDSYQEGTCTLLR--KQP-ITVKECCCSMGQAWGRYCL  143 (245)
Q Consensus        82 ~~~C~C~~g~~l~~~g~~C~-~~~~~~C~~~~~~~~C~~~~--~~~-~~~~~C~C~~G~~~G~~C~  143 (245)
                      +|.|.|++||    .+..|. ++++  |..   ..+|.+.+  .+. .++|+|.|++||. |..|+
T Consensus       113 ~~~C~C~~G~----~G~~C~~~~~~--C~~---~~~C~~~g~C~~~~~~~~~C~C~~G~~-G~~Ce  168 (169)
T 2vj2_A          113 PWQCLCETNW----GGQLCDKDLNY--CGT---HQPCLNGGTCSNTGPDKYQCSCPEGYS-GPNCE  168 (169)
T ss_dssp             TTCCEECTTE----ETTTTCEESCH--HHH---TCCCCTTCEEEECSTTCEEEECCTTCC-STTSC
T ss_pred             CCEEeCCCCC----CCCcccCCCCC--CCC---CCCCCCCCEEcCCCCCCcEeECCCCCc-CcCcC
Confidence            5666666666    355553 4444  521   23455443  343 4556666666666 66554

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.24  E-value=7e-12  Score=107.61  Aligned_cols=86  Identities=24%  Similarity=0.616  Sum_probs=74.0

Q ss_pred             ccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE-eccccccC-CCCCCCCeEeecCCcceecCCCCceeCC
Q psy11798         18 EDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI-DINECKEN-EGICEDGKCINIAGGVTCECPEGFMLSP   95 (245)
Q Consensus        18 ~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-~~~eC~~~-~~~C~~~~C~~~~g~~~C~C~~g~~l~~   95 (245)
                      .|+|+|.++|+.++++|.+..++|.|.|++||+    |+.|+ +++||... ++.|.+ .|+++.++|.|.|++||.+..
T Consensus         3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~----g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~~   77 (317)
T 3h5c_B            3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYE----GSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGE   77 (317)
T ss_dssp             ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCC----SSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEECCT
T ss_pred             ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCc----CCccccCcccCCCCCCCCCcC-ccccCCCeeEEeccccccccc
Confidence            378999999988789999999999999999999    89998 99999862 255987 999999999999999999888


Q ss_pred             CCCceeecCcccc
Q psy11798         96 NGMKCIDVRQDVC  108 (245)
Q Consensus        96 ~g~~C~~~~~~~C  108 (245)
                      +++.|.++++..|
T Consensus        78 ~~~~C~~~~~c~c   90 (317)
T 3h5c_B           78 DHKQCVPHDQCAC   90 (317)
T ss_dssp             TSSCCEECSSCCC
T ss_pred             ccccccccccccc
Confidence            8899988887445

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.21  E-value=1.7e-11  Score=84.42  Aligned_cols=72  Identities=39%  Similarity=0.894  Sum_probs=60.2

Q ss_pred             eEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCc-cCCCCCceEecCCCc
Q psy11798         58 CIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR-KQPITVKECCCSMGQ  136 (245)
Q Consensus        58 C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~-~~~~~~~~C~C~~G~  136 (245)
                      |+|+|||.. +..|.++.|+++.++|.|.|++||.+  .+..|+++++  |..   .++|.+.. .+..++|.|.|++||
T Consensus         2 C~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~dide--C~~---~~~C~~~~C~n~~g~y~C~C~~G~   73 (82)
T 1emn_A            2 AVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDE--CSV---GNPCGNGTCKNVIGGFECTCEEGF   73 (82)
T ss_dssp             CCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECCG--GGT---CCTTSSSCEEECSSSEEECCSSSS
T ss_pred             CCccccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCccc--ccC---CCCCCCCEeECCCCCEEeECCCCe
Confidence            678999986 44588789999999999999999976  5789999988  842   45787544 889999999999999


Q ss_pred             c
Q psy11798        137 A  137 (245)
Q Consensus       137 ~  137 (245)
                      .
T Consensus        74 ~   74 (82)
T 1emn_A           74 E   74 (82)
T ss_dssp             C
T ss_pred             E
Confidence            7

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=99.20  E-value=2.1e-11  Score=116.50  Aligned_cols=84  Identities=37%  Similarity=0.962  Sum_probs=72.6

Q ss_pred             cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCC
Q psy11798         19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGM   98 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~   98 (245)
                      +++||..++..|.+.|.|++++|.|.|++||.+ .+++.|+++|||. .+..|.+ .|+|+.|+|.|.|++||.+..+++
T Consensus       311 ~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~-~~~~C~~-~C~n~~gsy~C~C~~Gy~l~~~~~  387 (791)
T 3m0c_C          311 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTK  387 (791)
T ss_dssp             SCCSTTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTTEEECCCCCS-SSSSCTT-TCCBCSSCBCCCCCSSEECCSSCC
T ss_pred             ccccccccccCccccccCCCCCcccCCCCCCcc-CCCCccccCcccC-CCCCCCC-eeecCCCCceeecCCCCEeCCCCc
Confidence            467777666677789999999999999999998 6689999999998 3556865 899999999999999999988899


Q ss_pred             ceeecCc
Q psy11798         99 KCIDVRQ  105 (245)
Q Consensus        99 ~C~~~~~  105 (245)
                      .|.++++
T Consensus       388 ~C~~~~~  394 (791)
T 3m0c_C          388 ACKAVGS  394 (791)
T ss_dssp             CCEETTS
T ss_pred             eeeeccc
Confidence            9987765

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.18  E-value=2e-11  Score=84.83  Aligned_cols=74  Identities=27%  Similarity=0.658  Sum_probs=60.5

Q ss_pred             eccccccCCCCCCCCeEeecCCcceecCCCCceeCC-CCCceeecCcccccCCCcccCccCCc-cCCCCCceEecCCCcc
Q psy11798         60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLSP-NGMKCIDVRQDVCYDSYQEGTCTLLR-KQPITVKECCCSMGQA  137 (245)
Q Consensus        60 ~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~-~g~~C~~~~~~~C~~~~~~~~C~~~~-~~~~~~~~C~C~~G~~  137 (245)
                      |||||...++.|.++.|+++.++|.|.|++||.+.. .+..|+++++  |..  ....|.+.. .|..++|+|.|++||.
T Consensus         2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dide--C~~--~~~~C~~~~C~n~~g~y~C~C~~G~~   77 (86)
T 1lmj_A            2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDE--CQR--DPLLCRGGVCHNTEGSYRCECPPGHQ   77 (86)
T ss_dssp             CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCH--HHH--CSSTTTTSEEEEETTEEEEESCTTSC
T ss_pred             ccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCccc--ccC--CCCcCCCCEeEcCCCCEEEECcCCcc
Confidence            689999877779877999999999999999997653 4788999988  843  334465433 8889999999999997

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.17  E-value=1.4e-11  Score=85.78  Aligned_cols=71  Identities=34%  Similarity=0.797  Sum_probs=59.4

Q ss_pred             eccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCcc
Q psy11798         60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQA  137 (245)
Q Consensus        60 ~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~  137 (245)
                      ++|||...+..|.++.|+++.++|.|.|++||.+...++.|+++++  |    ..++|.....+..++|+|.|+ |+.
T Consensus         2 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dide--C----~~~~C~~~C~n~~g~y~C~C~-g~~   72 (87)
T 1z6c_A            2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDE--C----SENMCAQLCVNYPGGYTCYCD-GKK   72 (87)
T ss_dssp             CSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCH--H----HHSCCSSEECCCSSSCCEECC-SSS
T ss_pred             ccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCe--e----CCCCCCCEEEccCCCEEEECC-CCc
Confidence            6899988776686569999999999999999988878899998888  8    346787555899999999996 443

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.16  E-value=4.5e-14  Score=117.19  Aligned_cols=90  Identities=13%  Similarity=0.131  Sum_probs=64.1

Q ss_pred             CccccCCCCeeCCCccc-ccc-----------------------------ccCCCCCCCCCeeeeCCCCceEeCCCCcee
Q psy11798          2 STTMSVTGYRLRVETCE-DIN-----------------------------ECLELSNQCAFRCHNVPGSFRCICPYGYAL   51 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~-did-----------------------------eC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~   51 (245)
                      ++|.|++||+  |.+|+ +|+                             ||.+.|+..+++|++..++|+|.|++||+ 
T Consensus        53 y~C~Cp~Gf~--G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~-  129 (267)
T 4fbr_A           53 YNGEGPIGFR--GTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFK-  129 (267)
T ss_dssp             ETTSCCEEEE--EEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEE-
T ss_pred             eEEeCCCCcc--cccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCccEEeeCCCCcc-
Confidence            5788999998  55554 444                             46666666689999999999999999999 


Q ss_pred             CCCCCeeE-eccccccCC---------------------------CCCC-CCeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         52 APDGRHCI-DINECKENE---------------------------GICE-DGKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        52 ~~~g~~C~-~~~eC~~~~---------------------------~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                         |.+|+ ++++|...+                           ..|. +++|++..++|+|.|++||    .+..|.
T Consensus       130 ---G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf----~G~~c~  201 (267)
T 4fbr_A          130 ---SEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGF----RGTLTS  201 (267)
T ss_dssp             ---EEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEE----EEEEEE
T ss_pred             ---ccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCc----cccccc
Confidence               77775 455533211                           1244 4577777788888888888    466664

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.14  E-value=1.4e-11  Score=86.49  Aligned_cols=80  Identities=23%  Similarity=0.386  Sum_probs=63.0

Q ss_pred             CceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCcee--ecCcccccCCCcccCc
Q psy11798         40 SFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCI--DVRQDVCYDSYQEGTC  117 (245)
Q Consensus        40 sy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~--~~~~~~C~~~~~~~~C  117 (245)
                      +|+|.|.+||+    ++.| ++++|...|       |++..++|.|.|++||.      .|+  ++++  |    ..++|
T Consensus         1 sy~C~C~~g~~----g~~c-~~~~c~~~p-------C~n~~~~y~C~C~~G~~------~C~~~~~~~--C----~~~pC   56 (91)
T 1tpg_A            1 SYQVICRDEKT----QMIY-QQHQSWLRP-------VLRSNRVEYCWCNSGRA------QCHSVPVKS--C----SEPRC   56 (91)
T ss_dssp             CCCCCCBCSSS----CCBC-CSSCEEEEE-------CSSSSCEEEEECSSSCC------BCCEECEEE--C----SSCCS
T ss_pred             CeeeECCCCCc----CCeE-CCCcccCCc-------cccCCCCcEeECCCCCc------ccccCcCCc--c----cCCCC
Confidence            68999999998    7777 578886543       45667899999999993      674  4555  8    45678


Q ss_pred             cCCc--cCCC--CCceEecCCCccCCCCCcc
Q psy11798        118 TLLR--KQPI--TVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       118 ~~~~--~~~~--~~~~C~C~~G~~~G~~C~~  144 (245)
                      .+++  .+..  ++|.|.|++||. |..|+.
T Consensus        57 ~ngg~C~~~~~~~~~~C~C~~G~~-G~~Ce~   86 (91)
T 1tpg_A           57 FNGGTCQQALYFSDFVCQCPEGFA-GKSCEI   86 (91)
T ss_dssp             CTTCEEEEESSSSCEEEECCTTCB-SSSCCB
T ss_pred             CCCCEeecCCCCCCeEeECCCCCc-CCcCCc
Confidence            8876  5555  889999999998 999874

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=99.11  E-value=5.6e-11  Score=112.41  Aligned_cols=83  Identities=37%  Similarity=0.975  Sum_probs=72.0

Q ss_pred             cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCC
Q psy11798         19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGM   98 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~   98 (245)
                      +++||..++..|.+.|.|++++|.|.|++||++ .+++.|++++||.. ++.|.+ .|+|+.++|.|.|++||.+..+++
T Consensus       293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~-~~~C~~-~C~n~~g~y~C~C~~G~~~~~~~~  369 (699)
T 1n7d_A          293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD-PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTK  369 (699)
T ss_dssp             CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSS-SSSCTT-TCCBCSSCBCCCCCSSCBCCSSCC
T ss_pred             ccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcccCccccCC-CCcccc-ccccCCCCeeeeeecccccCCCCC
Confidence            678898777778889999999999999999998 67889999999974 355875 899999999999999999888888


Q ss_pred             ceeecC
Q psy11798         99 KCIDVR  104 (245)
Q Consensus        99 ~C~~~~  104 (245)
                      .|.++.
T Consensus       370 ~C~~~~  375 (699)
T 1n7d_A          370 ACKAVG  375 (699)
T ss_dssp             CCBCCS
T ss_pred             cccccc
Confidence            886553

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.10  E-value=1.2e-10  Score=109.22  Aligned_cols=121  Identities=26%  Similarity=0.562  Sum_probs=87.7

Q ss_pred             CccccCCCCeeCCCccc-cc--------cccCCCC----CCCCCeeeeCCCCceEeCC----CCceeCCCCCeeE-eccc
Q psy11798          2 STTMSVTGYRLRVETCE-DI--------NECLELS----NQCAFRCHNVPGSFRCICP----YGYALAPDGRHCI-DINE   63 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~-di--------deC~~~p----~~c~~~C~n~~gsy~C~C~----~Gy~~~~~g~~C~-~~~e   63 (245)
                      ..|.|++||.  |..|+ ++        ++|...+    +..+++|.+    +.|.|+    +||.    |..|+ ++++
T Consensus       458 G~C~C~~Gy~--G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~----G~~Ce~~~~~  527 (690)
T 3fcs_B          458 GVCRCGPGWL--GSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSSDFGKIT----GKYCECDDFS  527 (690)
T ss_dssp             TEEEECTTCC--SSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCCSSCCCB----STTSCBCSSC
T ss_pred             CceEeCCCcc--CCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCCee----CCCcCcccCc
Confidence            3599999999  88997 55        7787643    333788974    699999    9999    89997 6788


Q ss_pred             cccC-CCCCC-CCeEeecCCcceecCCCCceeCCCCCcee-ecCcccccCCCcccCccCCc--cCCCCCceEec-CCCcc
Q psy11798         64 CKEN-EGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCI-DVRQDVCYDSYQEGTCTLLR--KQPITVKECCC-SMGQA  137 (245)
Q Consensus        64 C~~~-~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~-~~~~~~C~~~~~~~~C~~~~--~~~~~~~~C~C-~~G~~  137 (245)
                      |... ...|. +|.|.+    +.|.|++||    .|..|. ..+...|... ...+|.+.+  .+    ..|.| .+||.
T Consensus       528 C~~~~~~~C~~~G~C~~----g~C~C~~Gy----~G~~CeC~~~~~~C~~~-~g~~C~~~G~C~~----g~C~C~~~Gy~  594 (690)
T 3fcs_B          528 CVRYKGEMCSGHGQCSC----GDCLCDSDW----TGYYCNCTTRTDTCMSS-NGLLCSGRGKCEC----GSCVCIQPGSY  594 (690)
T ss_dssp             CCBSSSSBGGGSEEEET----TEEEECTTE----ESSSSCEECCCTTTBCT-TSSBTSSSCEEET----TEEECCSTTCB
T ss_pred             CcCCCCCCCCCCCEecC----CeeECcCCC----cCCCCccCCCCCcccCC-CCCCCCCCCEEeC----CEEECCCCCcc
Confidence            8742 23487 679976    799999999    677775 1222237431 224576655  33    39999 99999


Q ss_pred             CCCCCccCC
Q psy11798        138 WGRYCLPCP  146 (245)
Q Consensus       138 ~G~~C~~C~  146 (245)
                       |..|+.|+
T Consensus       595 -G~~Ce~C~  602 (690)
T 3fcs_B          595 -GDTCEKCP  602 (690)
T ss_dssp             -STTSCBCT
T ss_pred             -CCCcCcCC
Confidence             99999754

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.08  E-value=8e-11  Score=101.41  Aligned_cols=133  Identities=26%  Similarity=0.528  Sum_probs=59.3

Q ss_pred             CccccCCCCeeCCCccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCC-CCeEeecC
Q psy11798          2 STTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE-DGKCINIA   80 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~-~~~C~~~~   80 (245)
                      ..|.|++||.  |..|+. ++|.. ++..+++|.+   .+.|.|++||+    |..|+. +.|.   ..|. +|.|++  
T Consensus       165 ~~C~C~~G~~--G~~C~~-~~C~~-~C~~~G~C~~---~~~C~C~~G~~----G~~C~~-~~C~---~~C~~~G~C~~--  227 (324)
T 2ygq_A          165 RICECPDGFH--GPHCEK-ALCTP-RCMNGGLCVT---PGFCICPPGFY----GVNCDK-ANCS---TTCFNGGTCFY--  227 (324)
T ss_dssp             SCEECCTTEE--SSSSCE-ESSSS-CCCTTCEECS---SCCEECCTTCB----TTTTCB-CCCS---SCCCSSCCBSC--
T ss_pred             CeEECCCCCc--CCCCCC-CCCCC-CCCCCCEEcC---CCEEeCCCCcc----CCCccc-CcCC---CCCCCCCeeCC--
Confidence            4799999999  888984 45753 5555788975   57899999999    888863 4564   2377 568876  


Q ss_pred             CcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCccCCCCCcc--C----CCCCCC--C
Q psy11798         81 GGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYCLP--C----PSPNSG--E  152 (245)
Q Consensus        81 g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~--C----~~~~~~--~  152 (245)
                       .+.|.|++||    .|..|+ +++  |.     .+|.+.+. -.+.+.|.|++||. |..|+.  |    ...+++  .
T Consensus       228 -~~~C~C~~G~----~G~~C~-~~~--C~-----~~C~~~g~-C~~~~~C~C~~G~~-G~~C~~~~C~~~C~~~g~C~~~  292 (324)
T 2ygq_A          228 -PGKCICPPGL----EGEQCE-ISK--CP-----QPCRNGGK-CIGKSKCKCSKGYQ-GDLCSKPVCEPGCGAHGTCHEP  292 (324)
T ss_dssp             -SSCBCCCTTC----CTTTTC-----------------------------------------------------------
T ss_pred             -CCeeeCCCCc----cCCCCC-cCc--CC-----CcCCCCCE-ECCCCEEECCCCCc-CCCCcCCCCCCCCCCCCEECCC
Confidence             3789999999    677884 344  62     34554431 11357999999998 988873  3    333322  3


Q ss_pred             CceeccCCCCCeeE
Q psy11798        153 PATFWSHYPKGFFF  166 (245)
Q Consensus       153 ~~~~c~~~~~g~~~  166 (245)
                      +.+.|+.+..|..+
T Consensus       293 ~~C~C~~G~~G~~C  306 (324)
T 2ygq_A          293 NKCQCQEGWHGRHC  306 (324)
T ss_dssp             --------------
T ss_pred             CEeECCCCCcCCCC
Confidence            45555544444433

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.06  E-value=7.3e-11  Score=90.13  Aligned_cols=61  Identities=25%  Similarity=0.501  Sum_probs=55.3

Q ss_pred             CccccCCCCeeCCCccccccccCCCCCCCCCee-eeCCCCceEeCCCCceeCCCCCeeEecccc
Q psy11798          2 STTMSVTGYRLRVETCEDINECLELSNQCAFRC-HNVPGSFRCICPYGYALAPDGRHCIDINEC   64 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~dideC~~~p~~c~~~C-~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC   64 (245)
                      ++|.|++||+  |..|+++|+|...+..|..+| +|+.++|.|.|++||++..+|+.|+++++.
T Consensus        69 y~C~C~~G~~--G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~~  130 (146)
T 1x7a_L           69 YECWCQVGFE--GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPF  130 (146)
T ss_dssp             EEEECCSSEE--STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEECSSS
T ss_pred             EEEecCCCCc--CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCCCCC
Confidence            4799999999  999999999998777787799 999999999999999999999999987754

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.01  E-value=1.3e-10  Score=84.02  Aligned_cols=80  Identities=31%  Similarity=0.615  Sum_probs=40.0

Q ss_pred             CCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCccCCC
Q psy11798         46 PYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPI  125 (245)
Q Consensus        46 ~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~  125 (245)
                      ..+|.    +..| +++||...++.|.+ .|+++.++|.|.|++||.+. ++..|+++++  |..   .++|....+|..
T Consensus        19 ~~~~~----~~~C-d~neC~~~~~~C~~-~C~n~~g~y~C~C~~Gy~g~-~g~~C~dide--C~~---~~~C~~~C~n~~   86 (107)
T 2w2n_E           19 ENLYF----QGAM-GTNECLDNNGGCSY-VCNDLKIGYECLCPDGFQLV-AQRRCEDIDE--CQD---PDTCSQLCVNLE   86 (107)
T ss_dssp             -CCCC----SCCB-SCCGGGTGGGGCSS-EEECCSBSCEEECCTTCEEE-TTTEEEC-----------------------
T ss_pred             CCCcC----CCCC-cCccCcCCCCCCCC-EeEeCCCCeEEECCCCcccc-CCCccccccc--cCC---CCCcCCeeecCC
Confidence            44565    6778 79999876566864 89999999999999999764 5688998888  832   367876668999


Q ss_pred             CCceEecCCCcc
Q psy11798        126 TVKECCCSMGQA  137 (245)
Q Consensus       126 ~~~~C~C~~G~~  137 (245)
                      ++|.|.|++||.
T Consensus        87 gsy~C~C~~Gy~   98 (107)
T 2w2n_E           87 GGYKCQCEEGFQ   98 (107)
T ss_dssp             ------------
T ss_pred             CCEEEECCCCce
Confidence            999999999996

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.97  E-value=2e-12  Score=107.30  Aligned_cols=175  Identities=9%  Similarity=-0.100  Sum_probs=112.4

Q ss_pred             CccccCCCCee-CCCccc-cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE-eccccccCCCCCCCCeEee
Q psy11798          2 STTMSVTGYRL-RVETCE-DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI-DINECKENEGICEDGKCIN   78 (245)
Q Consensus         2 ~~C~C~~G~~~-~g~~C~-dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-~~~eC~~~~~~C~~~~C~~   78 (245)
                      +++-|.||... .|.+++ ++.++.. ++..+++|++..++|.|.|++||+    ++.|+ +++||...+ .|....|.+
T Consensus        13 ~s~~~~pgg~~~~g~~~~~n~~~~~~-~c~ngG~C~~g~~~y~C~Cp~Gf~----G~~Ce~ni~ec~~~~-~c~s~pC~n   86 (267)
T 4fbr_A           13 SQATWNPGGLWLIGARDKQNVVALDI-KSDDGGKTLKGTMTYNGEGPIGFR----GTLSSANNYTVENQW-GGTSAPWQP   86 (267)
T ss_dssp             TTSCCEEEEEEECCCCSSCCEEEEEE-ECSSTTSEEEEEEEETTSCCEEEE----EEECSTTEEEEEEES-SSTTSCEEE
T ss_pred             ccCCcCCCCceeeccccccccccCCC-CcCCCCeecCCCCCeEEeCCCCcc----ccccccccccccccc-CcCCCcccC
Confidence            46778888444 477777 6666554 556699999999999999999999    88897 778876433 244445655


Q ss_pred             cCCcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCc--cCCCCCceEecCCCccCCCCCcc----CCCCCCCC
Q psy11798         79 IAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR--KQPITVKECCCSMGQAWGRYCLP----CPSPNSGE  152 (245)
Q Consensus        79 ~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~--~~~~~~~~C~C~~G~~~G~~C~~----C~~~~~~~  152 (245)
                      .   ..|     +    .+..|...++  |    .+.+|.+..  .+...+|.|.|+.||. |.+|+.    |.+.... 
T Consensus        87 g---gtc-----~----~G~~c~~~~e--C----~s~pC~ngG~C~~~~~sy~C~C~~Gf~-G~~Ce~~~d~C~n~~~c-  146 (267)
T 4fbr_A           87 G---GVW-----V----LGARDKQNIV--A----VSIKSNDGGKTLTGTTTYNGEGPIGFK-SEVTDGDTYSVENQWGG-  146 (267)
T ss_dssp             E---EEE-----E----CCCCSSCCEE--E----EEEECSSTTSEEEEEEEETTSCCEEEE-EEECCCCEEEEEEECSS-
T ss_pred             C---Cee-----e----ccCccccccc--c----CCCCCCCCCEEecCCccEEeeCCCCcc-ccCCCCCcccccccCCc-
Confidence            3   122     2    4556655555  7    456788777  7778889999999999 888874    2111111 


Q ss_pred             CceeccCCCCCeeEeeeeeeeeeccCcccCCCCceeeeccccCCc-cCccccccceEeEEeee
Q psy11798        153 PATFWSHYPKGFFFVLFFLVIFWSILPIYKTIKDITILSVCAYNM-KQTTLHYTNFFFLNFLF  214 (245)
Q Consensus       153 ~~~~c~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  214 (245)
                      ....|.   .|.+.        +.+...+.+++.+. ......+. .+.+.+|.+.++.||.-
T Consensus       147 ~s~pC~---ngg~c--------~~G~~c~~~i~c~~-~~c~ngg~C~dg~~~y~C~Cp~Gf~G  197 (267)
T 4fbr_A          147 SAAPWH---SGGVW--------VLGTRGKQNVINVD-AKSNDGGKTLSGTMTYNGEGPIGFRG  197 (267)
T ss_dssp             TTSCCE---EEEEE--------ECCSSTTSCEEEEE-EECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred             CCcccc---CCcce--------ecccccccccccCC-CCCCCCCEeeCCCCCeEEeCCCCccc
Confidence            111221   12222        23555555554332 44445555 56777799999999963

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.93  E-value=4.6e-10  Score=84.41  Aligned_cols=60  Identities=30%  Similarity=0.627  Sum_probs=38.4

Q ss_pred             CccccCCCCeeCCCcccc-c-cccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccc
Q psy11798          2 STTMSVTGYRLRVETCED-I-NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINE   63 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~d-i-deC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~e   63 (245)
                      .+|.|++||+  |..|++ + |+|...+..|..+|++..++|.|.|++||++..+|+.|+++++
T Consensus        63 y~C~C~~G~~--G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~~  124 (134)
T 2vh0_B           63 YTCTCLEGFE--GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP  124 (134)
T ss_dssp             --------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred             EEeeCCCCcc--CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCcCCC
Confidence            4799999999  899996 7 8998877778779999999999999999999999999987654

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.92  E-value=1.2e-09  Score=79.83  Aligned_cols=60  Identities=23%  Similarity=0.423  Sum_probs=51.7

Q ss_pred             CccccCCCCeeCCCccccc---cccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccc
Q psy11798          2 STTMSVTGYRLRVETCEDI---NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINE   63 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~di---deC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~e   63 (245)
                      ++|.|++||+  |..|+++   ++|...+..|.++|+|+.++|+|.|++||++..+++.|+++.+
T Consensus        35 y~C~C~~G~~--G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~   97 (114)
T 1aut_L           35 FSCDCRSGWE--GRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK   97 (114)
T ss_dssp             CCEEECTTEE--STTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred             cEeeCCCCCc--CCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcCcc
Confidence            4799999999  8889854   4698766678779999999999999999999999999987543

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.91  E-value=3.1e-10  Score=97.68  Aligned_cols=112  Identities=28%  Similarity=0.652  Sum_probs=37.4

Q ss_pred             CccccCCCCeeCCCccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCC-CCeEeecC
Q psy11798          2 STTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE-DGKCINIA   80 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~-~~~C~~~~   80 (245)
                      ..|.|++||.  |..|+. ++|. .++..+++|.+   .+.|.|++||+    |..|+ +++|.   ..|. ++.|+.  
T Consensus       197 ~~C~C~~G~~--G~~C~~-~~C~-~~C~~~G~C~~---~~~C~C~~G~~----G~~C~-~~~C~---~~C~~~g~C~~--  259 (324)
T 2ygq_A          197 GFCICPPGFY--GVNCDK-ANCS-TTCFNGGTCFY---PGKCICPPGLE----GEQCE-ISKCP---QPCRNGGKCIG--  259 (324)
T ss_dssp             CCEECCTTCB--TTTTCB-CCCS-SCCCSSCCBSC---SSCBCCCTTCC----TTTTC----------------------
T ss_pred             CEEeCCCCcc--CCCccc-CcCC-CCCCCCCeeCC---CCeeeCCCCcc----CCCCC-cCcCC---CcCCCCCEECC--
Confidence            4799999999  889984 4575 45555788976   47999999999    88885 56675   2377 568874  


Q ss_pred             CcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCccCCCCCccC
Q psy11798         81 GGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRYCLPC  145 (245)
Q Consensus        81 g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~C  145 (245)
                       .+.|.|++||    .|..|+ +++  |.     ..|.+.+. -...+.|.|.+||. |..|+..
T Consensus       260 -~~~C~C~~G~----~G~~C~-~~~--C~-----~~C~~~g~-C~~~~~C~C~~G~~-G~~C~~~  309 (324)
T 2ygq_A          260 -KSKCKCSKGY----QGDLCS-KPV--CE-----PGCGAHGT-CHEPNKCQCQEGWH-GRHCNKR  309 (324)
T ss_dssp             -----------------------------------------------------------------
T ss_pred             -CCEEECCCCC----cCCCCc-CCC--CC-----CCCCCCCE-ECCCCEeECCCCCc-CCCCCCC
Confidence             5799999999    677784 333  52     24543331 01257999999999 9999863

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.91  E-value=9.2e-10  Score=69.65  Aligned_cols=46  Identities=30%  Similarity=0.630  Sum_probs=40.8

Q ss_pred             ccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccc
Q psy11798         20 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECK   65 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~   65 (245)
                      .|||...+..|.+.|+|++|+|.|.|++||.+..+++.|++++||.
T Consensus         1 ~dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~   46 (55)
T 2jkh_L            1 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP   46 (55)
T ss_dssp             -CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             CccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence            3788766667888999999999999999999999999999999984

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.90  E-value=6.5e-10  Score=88.62  Aligned_cols=59  Identities=31%  Similarity=0.640  Sum_probs=38.2

Q ss_pred             CccccCCCCeeCCCcccc-c-cccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEecc
Q psy11798          2 STTMSVTGYRLRVETCED-I-NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDIN   62 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~d-i-deC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~   62 (245)
                      ++|.|++||+  |..|++ + ++|...++.|..+|++..++|.|.|++||++..+|+.|++++
T Consensus        63 y~C~C~~Gf~--G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~  123 (195)
T 1nfu_B           63 YTCTCLEGFE--GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTG  123 (195)
T ss_dssp             --------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred             eeEeCCCCce--eccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCccccCC
Confidence            4799999999  999995 7 899987778877999999999999999999999999999764

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.88  E-value=1.1e-09  Score=85.56  Aligned_cols=81  Identities=28%  Similarity=0.800  Sum_probs=64.9

Q ss_pred             CccccCCCCeeCCCccccccccCCCCCCC-CCeeeeCCCCceEeCCCCceeCCCCCeeE-eccccccCCCCCC-CCeEee
Q psy11798          2 STTMSVTGYRLRVETCEDINECLELSNQC-AFRCHNVPGSFRCICPYGYALAPDGRHCI-DINECKENEGICE-DGKCIN   78 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~dideC~~~p~~c-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-~~~eC~~~~~~C~-~~~C~~   78 (245)
                      .+|.|++||+  |..|+   +|...+ .| +++|+   ++|.|.|++||+    |..|+ ++++|.. ...|. +++|++
T Consensus        83 ~~C~C~~G~~--G~~C~---~C~~~~-~C~~g~C~---~~~~C~C~~G~~----G~~C~~~~~~C~~-~~~C~~~g~C~~  148 (169)
T 2vj2_A           83 GDCRCQYGWQ--GLYCD---KCIPHP-GCVHGICN---EPWQCLCETNWG----GQLCDKDLNYCGT-HQPCLNGGTCSN  148 (169)
T ss_dssp             TCCEECTTEE--SSSSC---EECCCT-TCSSEECS---STTCCEECTTEE----TTTTCEESCHHHH-TCCCCTTCEEEE
T ss_pred             CeeECCCCCC--CCCcc---cCCCCC-CCCCCCcC---CCCEEeCCCCCC----CCcccCCCCCCCC-CCCCCCCCEEcC
Confidence            4799999999  88885   466544 23 45776   679999999999    88897 8999985 23488 579999


Q ss_pred             c-CCcceecCCCCceeCCCCCce
Q psy11798         79 I-AGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        79 ~-~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      + .++|.|.|++||    .|..|
T Consensus       149 ~~~~~~~C~C~~G~----~G~~C  167 (169)
T 2vj2_A          149 TGPDKYQCSCPEGY----SGPNC  167 (169)
T ss_dssp             CSTTCEEEECCTTC----CSTTS
T ss_pred             CCCCCcEeECCCCC----cCcCc
Confidence            6 889999999999    57666

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.88  E-value=3.1e-09  Score=100.47  Aligned_cols=120  Identities=25%  Similarity=0.531  Sum_probs=83.6

Q ss_pred             CCccccccccC-CCCCCC-CCeeeeCC--CCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCC
Q psy11798         14 VETCEDINECL-ELSNQC-AFRCHNVP--GSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPE   89 (245)
Q Consensus        14 g~~C~dideC~-~~p~~c-~~~C~n~~--gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~   89 (245)
                      ...|..+++|. .....| .+.|++..  -.+.+.|+.|...  ....| +++||...++.|.+ .|+++.++|.|.|++
T Consensus       246 e~~C~~~~~C~~~~~~~C~~g~Ci~~~~~Cd~~~dC~dgsDe--~~~~C-~~~eC~~~~~~C~~-~C~~~~~~~~C~C~~  321 (699)
T 1n7d_A          246 EVGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDE--PIKEC-GTNECLDNNGGCSH-VCNDLKIGYECLCPD  321 (699)
T ss_dssp             SSSTTCCCCCCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSC--CCSSC-CCCCTTSSTTTSCT-TCCCCTTCCCCCCCS
T ss_pred             cCCCCCCCcccCCCceecCCCcEeCCcccccccceecCcccc--ccccc-ccccccccccCcCC-CcccCCCCcEEeCCC
Confidence            34454444552 222234 45665532  2345677776541  12235 68899876667865 899999999999999


Q ss_pred             CceeCCCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCccC---CCCCc
Q psy11798         90 GFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAW---GRYCL  143 (245)
Q Consensus        90 g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~---G~~C~  143 (245)
                      ||.+ .+++.|++++|  |.   ..++|.+.+.|..++|+|.|++||..   ++.|.
T Consensus       322 G~~~-~~~~~C~dide--C~---~~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~  372 (699)
T 1n7d_A          322 GFQL-VAQRRCEDIDE--CQ---DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK  372 (699)
T ss_dssp             SSCC-CSSSCCCCCCC--CS---SSSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCB
T ss_pred             CeEc-CCCCcccCccc--cC---CCCccccccccCCCCeeeeeecccccCCCCCccc
Confidence            9987 57889999988  84   24679888899999999999999964   45565

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.87  E-value=1.7e-09  Score=71.54  Aligned_cols=48  Identities=29%  Similarity=0.611  Sum_probs=44.1

Q ss_pred             ccccccCCCCCCCCCeeeeCCC-CceEeCCCCceeCCCCCeeEeccccc
Q psy11798         18 EDINECLELSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINECK   65 (245)
Q Consensus        18 ~dideC~~~p~~c~~~C~n~~g-sy~C~C~~Gy~~~~~g~~C~~~~eC~   65 (245)
                      .|+|||..+...|.+.|+|+++ +|.|.|++||.|.++++.|.+++||.
T Consensus         3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~   51 (69)
T 1kli_L            3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   51 (69)
T ss_dssp             SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence            5899998777789999999998 89999999999999999999999974

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.83  E-value=3.1e-09  Score=101.56  Aligned_cols=120  Identities=25%  Similarity=0.534  Sum_probs=80.3

Q ss_pred             CCccccccccC-CCCCCC-CCeeeeCCC--CceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCC
Q psy11798         14 VETCEDINECL-ELSNQC-AFRCHNVPG--SFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPE   89 (245)
Q Consensus        14 g~~C~dideC~-~~p~~c-~~~C~n~~g--sy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~   89 (245)
                      +..|..+++|. .....| .+.|++...  ...+.|+.|+..  ....| ++++|...++.|.+ .|+++.++|.|.|++
T Consensus       264 E~~C~~~~~C~~~~~~~C~~G~Ci~~~~~Cd~~~dC~dgsDe--~~~~C-~~~~C~~~~~~C~~-~C~~~~~~y~C~C~~  339 (791)
T 3m0c_C          264 EVGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDE--PIKEC-GTNECLDNNGGCSH-VCNDLKIGYECLCPD  339 (791)
T ss_dssp             ---------CCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSC--CCTTB-SCCSTTTGGGGCSS-EEEECSBSEEEECCT
T ss_pred             cCcccccccccCCCccccCCCcccccccccCCccccccccCc--ccccc-ccccccccccCccc-cccCCCCCcccCCCC
Confidence            45565555564 222345 566765432  345677777641  12335 46788765556765 899999999999999


Q ss_pred             CceeCCCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCccC---CCCCc
Q psy11798         90 GFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAW---GRYCL  143 (245)
Q Consensus        90 g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~---G~~C~  143 (245)
                      ||.+ .+++.|.+++|  |.   ....|.+.+.|..++|+|.|.+||.+   ++.|.
T Consensus       340 Gy~l-~~g~~C~dide--C~---~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~  390 (791)
T 3m0c_C          340 GFQL-VAQRRCEDIDE--CQ---DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK  390 (791)
T ss_dssp             TCEE-ETTTEEECCCC--CS---SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCE
T ss_pred             CCcc-CCCCccccCcc--cC---CCCCCCCeeecCCCCceeecCCCCEeCCCCceee
Confidence            9987 57899999998  84   35678887899999999999999963   55664

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.80  E-value=1.2e-08  Score=90.80  Aligned_cols=116  Identities=24%  Similarity=0.580  Sum_probs=78.9

Q ss_pred             ccccCCCCeeCCCccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEe-c----------cccccCCCCC
Q psy11798          3 TTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID-I----------NECKENEGIC   71 (245)
Q Consensus         3 ~C~C~~G~~~~g~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~-~----------~eC~~~~~~C   71 (245)
                      .|.|.+||.  |..|+.  .|.  |+..+++|.+  +++.|.|++||+    |.+|+. .          ++|.. .+.|
T Consensus       186 ~c~C~~g~~--G~~C~~--~C~--~C~~~G~C~~--~~g~C~C~~G~~----G~~Ce~~C~~g~~g~~C~~~C~~-~~~C  252 (423)
T 2gy5_A          186 VRRCEAQKW--GPECNH--LCT--ACMNNGVCHE--DTGECICPPGFM----GRTCEKACELHTFGRTCKERCSG-QEGC  252 (423)
T ss_dssp             ECSSCTTEE--STTSCE--ECC--CCCTTCEECT--TTCCEECCTTEE----STTSCEECCTTEESTTSCEECCS-TTTT
T ss_pred             CCcCCCCCC--CCCCCC--CCC--CCCCCCEEEC--CCCcEeCCCCcc----CCCcccccCCCCCCCCcCccCCC-CCCC
Confidence            488999999  888874  352  5666889976  578999999999    888874 2          23432 2346


Q ss_pred             C-CCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCccc------CccCCc--cCCCCCceEecCCCccCCCCC
Q psy11798         72 E-DGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEG------TCTLLR--KQPITVKECCCSMGQAWGRYC  142 (245)
Q Consensus        72 ~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~------~C~~~~--~~~~~~~~C~C~~G~~~G~~C  142 (245)
                      . ++.|.  .+++.|.|++||    .|..|...    |...+...      .|.++.  .+.   +.|.|++||. |..|
T Consensus       253 ~~~g~C~--~~~~~C~C~~G~----~G~~C~~~----C~~G~~G~~C~~~C~C~ngg~C~~~---~~C~C~~G~~-G~~C  318 (423)
T 2gy5_A          253 KSYVFCL--PDPYGCSCATGW----KGLQCNEA----CHPGFYGPDCKLRCSCNNGEMCDRF---QGCLCSPGWQ-GLQC  318 (423)
T ss_dssp             TTCCEEE--TTTTEEECCBTC----BSGGGCBC----CCTTBCSBTTCCBCCCTTCCEEETT---TEEECCTTCB-STTS
T ss_pred             CCCCEEC--CCCCeEEeCCCc----ccccccCc----cCCCCcCCcccccccCCCCCEecCC---CceECCCCCc-CCCC
Confidence            6 45774  578999999999    57777531    32211111      243333  222   3599999999 9999


Q ss_pred             ccC
Q psy11798        143 LPC  145 (245)
Q Consensus       143 ~~C  145 (245)
                      +.+
T Consensus       319 e~~  321 (423)
T 2gy5_A          319 ERE  321 (423)
T ss_dssp             CBC
T ss_pred             ccC
Confidence            975

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.79  E-value=5.8e-09  Score=79.12  Aligned_cols=60  Identities=25%  Similarity=0.531  Sum_probs=50.4

Q ss_pred             CccccCCCCeeCCCcccc-ccccCCCC---CCCCCeeeeCCC-CceEeCCCCceeCCCCCeeEeccc
Q psy11798          2 STTMSVTGYRLRVETCED-INECLELS---NQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINE   63 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~d-ideC~~~p---~~c~~~C~n~~g-sy~C~C~~Gy~~~~~g~~C~~~~e   63 (245)
                      ++|.|++||+  |..|++ +++|...+   ..|.++|++..+ +|.|.|++||++..+|+.|+++++
T Consensus        68 y~C~C~~G~~--G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e  132 (142)
T 2c4f_L           68 YICFCLPAFE--GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE  132 (142)
T ss_dssp             EEEECCTTEE--STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred             EEeeCCCCcc--CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCCCCc
Confidence            4799999999  999995 78864332   345559999999 999999999999999999998876

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.77  E-value=2.8e-09  Score=93.79  Aligned_cols=61  Identities=41%  Similarity=0.865  Sum_probs=26.2

Q ss_pred             CccccCCCCee--CCCccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccc
Q psy11798          2 STTMSVTGYRL--RVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINE   63 (245)
Q Consensus         2 ~~C~C~~G~~~--~g~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~e   63 (245)
                      ..|.|++||++  +|+.|+|+|||. .+..|...|.|+.++|.|.|++||++.++++.|..+++
T Consensus        24 ~~C~C~~G~~l~~~~~~C~d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~~   86 (386)
T 3v65_B           24 VQCTCHTGYRLTEDGRTCQDVNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGP   86 (386)
T ss_dssp             -----------------------------CCTTEEC-----CCEECCTTEEECTTSSCEEECSS
T ss_pred             cEeECCCCceECCCCCccCccceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCCeECCccc
Confidence            47999999997  799999999997 34568777999999999999999999999999986543

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.75  E-value=1.1e-08  Score=87.62  Aligned_cols=62  Identities=31%  Similarity=0.704  Sum_probs=54.8

Q ss_pred             CccccCCCCeeCCCccc-cccccCCC-CCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccc
Q psy11798          2 STTMSVTGYRLRVETCE-DINECLEL-SNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECK   65 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~-dideC~~~-p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~   65 (245)
                      ..|.|++||+  |..|+ |+|||... +..|...|.|..++|.|.|++||.+..+++.|.++++|.
T Consensus        26 ~~C~C~~g~~--g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c~   89 (317)
T 3h5c_B           26 YTCTCSPGYE--GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA   89 (317)
T ss_dssp             CCCCCSSSCC--SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEECSSCC
T ss_pred             eEEECCCCCc--CCccccCcccCCCCCCCCCcCccccCCCeeEEeccccccccccccccccccccc
Confidence            5799999999  99999 99999863 246766999999999999999999988899999988874

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.71  E-value=1.1e-08  Score=95.63  Aligned_cols=123  Identities=24%  Similarity=0.556  Sum_probs=84.3

Q ss_pred             CccccCCCCeeCCCccc-ccc---------ccCCCC----CCCCCeeeeCCCCceEeCC------CCceeCCCCCeeE-e
Q psy11798          2 STTMSVTGYRLRVETCE-DIN---------ECLELS----NQCAFRCHNVPGSFRCICP------YGYALAPDGRHCI-D   60 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~-did---------eC~~~p----~~c~~~C~n~~gsy~C~C~------~Gy~~~~~g~~C~-~   60 (245)
                      ..|.|.+||.  |..|+ +++         +|...+    +..+++|.+    ..|.|+      +||.    |..|+ +
T Consensus       446 g~C~C~~Gy~--G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----G~C~C~~~~~~~~G~~----G~~Ce~~  515 (687)
T 3k6s_B          446 GICRCDTGYI--GKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKLIY----GQYCECD  515 (687)
T ss_dssp             SSEEECSSEE--STTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET----TEEEECCCCSTTCCEE----STTSCEE
T ss_pred             CEeEcCCCCc--CCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC----CEEEcCCCCCCCCCcc----ccccccc
Confidence            4699999999  88998 544         576543    333788984    299999      9999    99997 6


Q ss_pred             ccccccC-CCCCC---CCeEeecCCcceecCCCCceeCCCCCcee-ecCcccccCCCcccCccCCccCCCCCceEecCCC
Q psy11798         61 INECKEN-EGICE---DGKCINIAGGVTCECPEGFMLSPNGMKCI-DVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMG  135 (245)
Q Consensus        61 ~~eC~~~-~~~C~---~~~C~~~~g~~~C~C~~g~~l~~~g~~C~-~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G  135 (245)
                      .+.|... ...|.   +|.|..    -.|.|.+||    .|..|. ..+...|... ....|.+.+.=..  ..|.|.+|
T Consensus       516 ~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~----~G~~Cec~~~~~~C~~~-~g~~Cs~~G~C~~--g~C~C~~G  584 (687)
T 3k6s_B          516 TINCERYNGQVCGGPGRGLCFC----GKCRCHPGF----EGSACQCERTTEGCLNP-RRVECSGRGRCRC--NVCECHSG  584 (687)
T ss_dssp             SSCSCEETTEETSHHHHEEEET----TEEEECTTC----CSTTSCSCCSSCTTBCT-TCSBTSSSCCBCS--SCBCCSTT
T ss_pred             cccccCCCCcCcCCCCCCeEEC----CEEEcCCCC----cCCCCccCCCCCCCCCC-CCCCCCCCCcCCC--CEEECCCC
Confidence            7778632 22375   468874    289999999    788885 1222336431 1235655441111  57999999


Q ss_pred             ccCCCCCccCC
Q psy11798        136 QAWGRYCLPCP  146 (245)
Q Consensus       136 ~~~G~~C~~C~  146 (245)
                      |. |..|+.|+
T Consensus       585 y~-G~~Ce~c~  594 (687)
T 3k6s_B          585 YQ-LPLCQECP  594 (687)
T ss_dssp             CC-TTTTCCCT
T ss_pred             Cc-CCCCCCCC
Confidence            99 99999754

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.67  E-value=1.1e-08  Score=64.45  Aligned_cols=42  Identities=19%  Similarity=0.383  Sum_probs=35.0

Q ss_pred             CCccc-cccccCCCCCCCCCeee-----eCCCCceEeCCCCceeCCCCCeeE
Q psy11798         14 VETCE-DINECLELSNQCAFRCH-----NVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        14 g~~C~-dideC~~~p~~c~~~C~-----n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      |.+|+ ++|||.++|+.++++|.     +..++|.|.|++||+    |++|+
T Consensus         1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE   48 (55)
T 3u7u_G            1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ   48 (55)
T ss_dssp             --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred             CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence            45787 99999999999999994     567899999999999    98886

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=98.66  E-value=1.2e-08  Score=63.44  Aligned_cols=41  Identities=24%  Similarity=0.591  Sum_probs=36.5

Q ss_pred             CCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEecccc
Q psy11798         24 LELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC   64 (245)
Q Consensus        24 ~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC   64 (245)
                      ..++..|.+.|+|++++|.|.|++||.+.++++.|++++|+
T Consensus         2 ~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~   42 (51)
T 1kig_L            2 SLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             CTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence            34455677889999999999999999999999999999987

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.65  E-value=4.5e-08  Score=91.77  Aligned_cols=108  Identities=22%  Similarity=0.496  Sum_probs=79.0

Q ss_pred             CccccC----CCCeeCCCccc-cccccCCC---CCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE---eccccccCC-C
Q psy11798          2 STTMSV----TGYRLRVETCE-DINECLEL---SNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI---DINECKENE-G   69 (245)
Q Consensus         2 ~~C~C~----~G~~~~g~~C~-dideC~~~---p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~---~~~eC~~~~-~   69 (245)
                      ..|.|+    +||.  |..|+ ++++|..+   ++..++.|.+    +.|.|++||+    |..|+   ++++|.... .
T Consensus       504 g~C~C~~~~~~Gy~--G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~----G~~CeC~~~~~~C~~~~g~  573 (690)
T 3fcs_B          504 GQCVCHSSDFGKIT--GKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWT----GYYCNCTTRTDTCMSSNGL  573 (690)
T ss_dssp             SSEEECCCSSCCCB--STTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEE----SSSSCEECCCTTTBCTTSS
T ss_pred             CeeEeecCCCCCee--CCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCc----CCCCccCCCCCcccCCCCC
Confidence            479999    9999  99998 88999853   3333788976    8999999999    88886   578887532 3


Q ss_pred             CCC-CCeEeecCCcceecC-CCCceeCCCCCceeecCcccccCCCcccCccCCc--cCCCCCceEecCCCccCCCCCc
Q psy11798         70 ICE-DGKCINIAGGVTCEC-PEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLR--KQPITVKECCCSMGQAWGRYCL  143 (245)
Q Consensus        70 ~C~-~~~C~~~~g~~~C~C-~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~--~~~~~~~~C~C~~G~~~G~~C~  143 (245)
                      .|. +|.|++    ..|.| ++||    .|..|+.-..  |     .++|.+..  .+        |..||. |..|+
T Consensus       574 ~C~~~G~C~~----g~C~C~~~Gy----~G~~Ce~C~~--C-----~~~C~~~g~Cv~--------C~~g~t-G~~C~  627 (690)
T 3fcs_B          574 LCSGRGKCEC----GSCVCIQPGS----YGDTCEKCPT--C-----PDACTFKKECVE--------CKKFDR-GALHD  627 (690)
T ss_dssp             BTSSSCEEET----TEEECCSTTC----BSTTSCBCTT--S-----CCTTTSCCGGGT--------TTTTCC-SSSSS
T ss_pred             CCCCCCEEeC----CEEECCCCCc----cCCCcCcCCC--C-----CCCCCCCCCccc--------CCCCCc-cCCCC
Confidence            587 679976    38999 9999    6888853122  4     24565544  22        888887 77654

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.64  E-value=4.9e-08  Score=86.23  Aligned_cols=70  Identities=33%  Similarity=0.717  Sum_probs=59.4

Q ss_pred             cccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCccC
Q psy11798         62 NECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAW  138 (245)
Q Consensus        62 ~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~  138 (245)
                      |||...+..|.+ .|+++.++|.|.|++||.+ .+++.|++++|  |.   ..++|.+.+.|..++|.|.|.+||..
T Consensus         1 ~eC~~~~~~c~~-~C~~~~~~y~C~C~~G~~~-~~~~~C~dide--C~---~~~~C~~~C~n~~g~~~C~C~~g~~~   70 (400)
T 3p5b_L            1 NECLDNNGGCSH-VCNDLKIGYECLCPDGFQL-VAQRRCEDIDE--CQ---DPDTCSQLCVNLEGGYKCQCEEGFQL   70 (400)
T ss_dssp             CCTTTTGGGCSS-EEEECSSSEEEECCTTEEE-CSSSCEEECCC--CS---TTSSCSSCCBCCSSSCBCCCCTTCCC
T ss_pred             CcccCCCCCCCC-EeECCCCCeEEECCCCCCc-CCCCcccCchh--hh---ccCCCCCccCCCccceeeeccccccc
Confidence            578776666765 9999999999999999987 57889999998  84   24679888899999999999999963

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.61  E-value=4.3e-08  Score=61.25  Aligned_cols=43  Identities=37%  Similarity=0.824  Sum_probs=36.7

Q ss_pred             ccccccCCC--------CCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEe
Q psy11798         18 EDINECLEL--------SNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID   60 (245)
Q Consensus        18 ~dideC~~~--------p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~   60 (245)
                      +|||||...        ...|.+.|+|++|+|.|.|++||++..+++.|++
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~   52 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA   52 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred             CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence            478999864        2567789999999999999999999988888863

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=98.59  E-value=3.3e-08  Score=61.84  Aligned_cols=43  Identities=30%  Similarity=0.683  Sum_probs=37.2

Q ss_pred             cCCCCCCCCCeeeeCCC-CceEeCCCCceeCCCCCeeEeccccc
Q psy11798         23 CLELSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINECK   65 (245)
Q Consensus        23 C~~~p~~c~~~C~n~~g-sy~C~C~~Gy~~~~~g~~C~~~~eC~   65 (245)
                      |..+...|.+.|+|+++ +|.|.|++||.|.+|++.|++++||.
T Consensus         2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~   45 (53)
T 2bz6_L            2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   45 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence            44444568889999998 79999999999999999999999983

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.51  E-value=6.5e-08  Score=63.88  Aligned_cols=49  Identities=31%  Similarity=0.700  Sum_probs=43.6

Q ss_pred             EeccccccCCCCCCCCeEeecCC-cceecCCCCceeCCCCCceeecCcccc
Q psy11798         59 IDINECKENEGICEDGKCINIAG-GVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        59 ~~~~eC~~~~~~C~~~~C~~~~g-~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      +|++||...++.|.+ .|+++.+ +|.|.|++||.|..+++.|.++++..|
T Consensus         3 ~d~~eC~~~nggC~h-~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~C   52 (69)
T 1kli_L            3 DDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC   52 (69)
T ss_dssp             SCCCCTTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCT
T ss_pred             cccccccCCCCCcCC-EeEcCCCCCEEEeCCCCCeECCCCCcccCcccccC
Confidence            478999877777987 8999999 899999999999999999999999555

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.47  E-value=1.2e-07  Score=59.73  Aligned_cols=46  Identities=30%  Similarity=0.757  Sum_probs=39.9

Q ss_pred             cccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccc
Q psy11798         62 NECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        62 ~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      |||...++.|.+ .|+|+.|+|.|.|++||.|..+++.|.++++.+|
T Consensus         2 dEC~~~~~~C~~-~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~c   47 (55)
T 2jkh_L            2 KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC   47 (55)
T ss_dssp             CCTTTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSCT
T ss_pred             ccccCCCCCcCc-EeEcCCCCeEEeCCCCCEECCCCCeeccCccccC
Confidence            678765667876 8999999999999999999999999999998444

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.45  E-value=9.8e-08  Score=55.67  Aligned_cols=37  Identities=27%  Similarity=0.740  Sum_probs=33.2

Q ss_pred             cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      |+|+|.++|+.++++|++..++|.|.|++||+    |+.|+
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~----G~~Ce   38 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE----GKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred             ccccCCCCCCCCCCEeEcCCCceEeECCCCCc----CCccC
Confidence            68999998988899999999999999999998    77664

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.41  E-value=6.1e-08  Score=62.28  Aligned_cols=48  Identities=17%  Similarity=0.331  Sum_probs=38.2

Q ss_pred             CccccccccCCCCCCCC--CeeeeCCCCceEeCCCCceeCCCCCeeEeccccc
Q psy11798         15 ETCEDINECLELSNQCA--FRCHNVPGSFRCICPYGYALAPDGRHCIDINECK   65 (245)
Q Consensus        15 ~~C~dideC~~~p~~c~--~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~   65 (245)
                      ..|+++|+|.++|+.++  ++|++..++|.|.|++||++   |.+|++.++|.
T Consensus         6 ~~~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C~~~~~C~   55 (61)
T 2k2s_B            6 QLSETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRI---SLDGTGNVTCI   55 (61)
T ss_dssp             -CTTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEE---EECSSSCEEEE
T ss_pred             hhcCCCCcCcCCCCcCCCccccccCCCceEeECCCCCcc---CCCCCCCCEec
Confidence            35789999999998777  89999999999999999973   34565555554

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=98.30  E-value=5.1e-07  Score=55.89  Aligned_cols=42  Identities=24%  Similarity=0.699  Sum_probs=36.5

Q ss_pred             cCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccc
Q psy11798         66 ENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        66 ~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      ..++.|.+ .|+|+.|+|.|.|++||.|..+++.|.++++.+|
T Consensus         3 ~~ng~C~~-~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~pC   44 (51)
T 1kig_L            3 LDNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERFPC   44 (51)
T ss_dssp             TTTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSSCT
T ss_pred             CCCCCcCC-EeEcCCCCeEEeCCCCcEECCCCCccccCCcccC
Confidence            34456876 7999999999999999999999999999999666

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=98.27  E-value=8.6e-07  Score=56.57  Aligned_cols=51  Identities=24%  Similarity=0.496  Sum_probs=39.7

Q ss_pred             cCCCCCCCCCeeeeCC-CCceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeec
Q psy11798         23 CLELSNQCAFRCHNVP-GSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINI   79 (245)
Q Consensus        23 C~~~p~~c~~~C~n~~-gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~   79 (245)
                      |..+...|.+.|+|++ ++|.|.|++||.|.+|++.|+++++     ..|.+ .|+|.
T Consensus         2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~-----~pC~~-~c~n~   53 (59)
T 2wph_E            2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP-----FPCGR-VSVSQ   53 (59)
T ss_dssp             TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEESSS-----SCTTC-CCSCC
T ss_pred             CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCCC-----CCCCC-ccccc
Confidence            3444456888999999 6999999999999999999998764     23654 56654

>1apj_A Fibrillin; microfibril, TB module, marfan syndrome, connective tissue, novel fold, extracellular matrix; NMR {Homo sapiens} SCOP: g.23.1.1

Probab=98.21  E-value=1.4e-08  Score=67.80  Aligned_cols=66  Identities=26%  Similarity=0.714  Sum_probs=52.6

Q ss_pred             eeecCcccccCCCcccCccCCccCCCCCceEecC-CCccCCCCCccCCCCCCCCCceeccCCCCCeeE
Q psy11798        100 CIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCS-MGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFF  166 (245)
Q Consensus       100 C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~-~G~~~G~~C~~C~~~~~~~~~~~c~~~~~g~~~  166 (245)
                      |.|++...|+..+..+.|.........+..|.|. .|.+||.+|++||..++.+|..+||+ ..||+.
T Consensus         2 c~D~R~~~Cy~~~~~g~C~~p~~~~~tk~~CCCs~~G~aWG~~Ce~CP~~gs~ef~~lCP~-G~G~~~   68 (74)
T 1apj_A            2 AQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPY-GSGIIV   68 (74)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEEEEHHHHHTTSCCSEETTTTEECCCTTSHHHHHHCSS-CSCSSC
T ss_pred             ceeccccCccccccCCcccCCCCCCccccccccCCCCCccCCCcccCCCCChHHHHhhCcC-CCcccC
Confidence            5566777788777677787666333567889999 69999999999999999999999997 556653

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=98.17  E-value=1.5e-06  Score=54.16  Aligned_cols=44  Identities=32%  Similarity=0.829  Sum_probs=36.9

Q ss_pred             cccCCCCCCCCeEeecCC-cceecCCCCceeCCCCCceeecCcccc
Q psy11798         64 CKENEGICEDGKCINIAG-GVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        64 C~~~~~~C~~~~C~~~~g-~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      |...++.|.+ .|+++.+ +|.|.|++||.|..+++.|.++++.+|
T Consensus         2 C~~~nggC~~-~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~c   46 (53)
T 2bz6_L            2 CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC   46 (53)
T ss_dssp             TTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCT
T ss_pred             CcCCCCCcCC-EeEcCCCCCEEeeCCCCCEECCCCCcccCCccccC
Confidence            4434456876 8999999 799999999999999999999999555

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.16  E-value=1.6e-06  Score=54.10  Aligned_cols=37  Identities=24%  Similarity=0.508  Sum_probs=32.7

Q ss_pred             cccccCCC---CCCCCCeee--eCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLEL---SNQCAFRCH--NVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~---p~~c~~~C~--n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +|++|.++   |+.++++|+  +..++|.|.|++||+    |..|+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   43 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ   43 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCC
Confidence            68899876   777789999  788999999999998    88886

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.06  E-value=3.3e-06  Score=52.45  Aligned_cols=42  Identities=31%  Similarity=0.832  Sum_probs=34.7

Q ss_pred             EeccccccC--------CCCCCCCeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         59 IDINECKEN--------EGICEDGKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        59 ~~~~eC~~~--------~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      +|||||...        .+.|.+ .|+|+.|+|.|.|++||.+..+++.|.
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~-~C~n~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQH-LCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSS-EEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             CccccccCcccccccccCCCCCC-EeECCCCCeEEECCCCCeECCCCCccC
Confidence            368899753        245875 999999999999999999888888875

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=98.06  E-value=4.7e-06  Score=53.10  Aligned_cols=44  Identities=36%  Similarity=0.749  Sum_probs=36.3

Q ss_pred             cccCCCCCCCCeEeecC-CcceecCCCCceeCCCCCceeecCcccc
Q psy11798         64 CKENEGICEDGKCINIA-GGVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        64 C~~~~~~C~~~~C~~~~-g~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      |...++.|.+ .|+++. |+|.|.|++||.|..+++.|.++++.+|
T Consensus         2 C~~~nggC~~-~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~~pC   46 (59)
T 2wph_E            2 CNIKNGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPC   46 (59)
T ss_dssp             TTTGGGGCSS-EEEECSTTCEEEECCTTEEECTTSSCEEESSSSCT
T ss_pred             CcCCCCCcCC-EeEeCCCCCEEeeCCCCcEECCCCCcccCCCCCCC
Confidence            3334456877 899999 6999999999999999999998877555

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=98.05  E-value=2.5e-06  Score=66.30  Aligned_cols=52  Identities=38%  Similarity=0.824  Sum_probs=43.0

Q ss_pred             CCCeeCCCc-cccccccCCCCCC---CCCeeeeCCCCceEeCCCCceeCCCCCeeEec
Q psy11798          8 TGYRLRVET-CEDINECLELSNQ---CAFRCHNVPGSFRCICPYGYALAPDGRHCIDI   61 (245)
Q Consensus         8 ~G~~~~g~~-C~dideC~~~p~~---c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~   61 (245)
                      +||.  +.. +.+++||...+..   |...|.|.+++|.|.|++||++..+++.|+++
T Consensus       113 ~Gf~--~~~~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~  168 (170)
T 1szb_A          113 TGFE--AFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ  168 (170)
T ss_dssp             CEEE--EEEEEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred             cCce--eeeeccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCccccc
Confidence            5676  444 4589999876644   87799999999999999999999999999864

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=98.03  E-value=3.2e-06  Score=55.98  Aligned_cols=39  Identities=28%  Similarity=0.676  Sum_probs=29.7

Q ss_pred             ccccccCCCCCCC--CCeeeeCCCCceEe-CCCCceeCCCCC
Q psy11798         18 EDINECLELSNQC--AFRCHNVPGSFRCI-CPYGYALAPDGR   56 (245)
Q Consensus        18 ~dideC~~~p~~c--~~~C~n~~gsy~C~-C~~Gy~~~~~g~   56 (245)
                      +|||||...+..|  .++|+|++|+|+|. +..||.+..++.
T Consensus         1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~   42 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGE   42 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCS
T ss_pred             CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCC
Confidence            3799998766667  46899999999997 456777655554

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=98.00  E-value=4.7e-06  Score=50.00  Aligned_cols=34  Identities=21%  Similarity=0.335  Sum_probs=28.8

Q ss_pred             ccCCC---CCCCCCeee--eCCCCceEeCCCCceeCCCCCeeE
Q psy11798         22 ECLEL---SNQCAFRCH--NVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        22 eC~~~---p~~c~~~C~--n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +|.++   |+.++++|+  +..++|.|.|++||+    |++|+
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   40 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ   40 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence            56666   777789998  677899999999999    88886

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.99  E-value=2.8e-06  Score=54.89  Aligned_cols=43  Identities=19%  Similarity=0.381  Sum_probs=36.3

Q ss_pred             ccccCCCCCCCCCeeee-----CCCCceEeCCCCceeCCCCCeeE-ecccccc
Q psy11798         20 INECLELSNQCAFRCHN-----VPGSFRCICPYGYALAPDGRHCI-DINECKE   66 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n-----~~gsy~C~C~~Gy~~~~~g~~C~-~~~eC~~   66 (245)
                      .|+|.++|+.++++|++     ..++|.|.|++||+    |++|+ +++++..
T Consensus         6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~~i~~~~~   54 (63)
T 1hae_A            6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMKVQ   54 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCEECCSSCT
T ss_pred             cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccCcCcCcccc
Confidence            36788889888999997     66899999999999    89996 7787754

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=97.93  E-value=1.1e-05  Score=71.68  Aligned_cols=115  Identities=20%  Similarity=0.505  Sum_probs=69.8

Q ss_pred             CccccCCCCeeCCCcccc-cc----------ccC-CCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEec-------c
Q psy11798          2 STTMSVTGYRLRVETCED-IN----------ECL-ELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDI-------N   62 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~d-id----------eC~-~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~-------~   62 (245)
                      ..|.|++||.  |..|+. .+          +|. .+++..++.|.  .++|.|.|++||.    |..|+..       +
T Consensus       216 g~C~C~~G~~--G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~----G~~C~~~C~~G~~G~  287 (423)
T 2gy5_A          216 GECICPPGFM--GRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--PDPYGCSCATGWK----GLQCNEACHPGFYGP  287 (423)
T ss_dssp             CCEECCTTEE--STTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--TTTTEEECCBTCB----SGGGCBCCCTTBCSB
T ss_pred             CcEeCCCCcc--CCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--CCCCeEEeCCCcc----cccccCccCCCCcCC
Confidence            5799999999  888984 32          333 12222245663  6789999999999    8888641       2


Q ss_pred             ccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCccCCCC
Q psy11798         63 ECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQAWGRY  141 (245)
Q Consensus        63 eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~~~G~~  141 (245)
                      .|.. +-.|. ++.|.+..   .|.|++||    .|..|+...   +. ....      .... ..-.|.|..||. |..
T Consensus       288 ~C~~-~C~C~ngg~C~~~~---~C~C~~G~----~G~~Ce~~~---~~-~~~~------~~~~-~~~~~~c~~g~~-g~~  347 (423)
T 2gy5_A          288 DCKL-RCSCNNGEMCDRFQ---GCLCSPGW----QGLQCEREG---IP-RMTP------KIVD-LPDHIEVNSGKF-NPI  347 (423)
T ss_dssp             TTCC-BCCCTTCCEEETTT---EEECCTTC----BSTTSCBCS---SC-CCCC------EECS-CCSBCCEESEEE-CCE
T ss_pred             cccc-cccCCCCCEecCCC---ceECCCCC----cCCCCccCc---cC-CcCc------ceec-CCCeEEeCCCcc-CCc
Confidence            2321 11366 46887654   49999999    688884321   10 0011      1011 123477888887 777


Q ss_pred             Ccc
Q psy11798        142 CLP  144 (245)
Q Consensus       142 C~~  144 (245)
                      |+.
T Consensus       348 C~~  350 (423)
T 2gy5_A          348 CKA  350 (423)
T ss_dssp             EEE
T ss_pred             ccc
Confidence            765

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.93  E-value=3.3e-06  Score=79.05  Aligned_cols=83  Identities=23%  Similarity=0.499  Sum_probs=62.6

Q ss_pred             CccccC------CCCeeCCCccc-cccccCCC---CCCC--CCeeeeCCCCceEeCCCCceeCCCCCeeE---ecccccc
Q psy11798          2 STTMSV------TGYRLRVETCE-DINECLEL---SNQC--AFRCHNVPGSFRCICPYGYALAPDGRHCI---DINECKE   66 (245)
Q Consensus         2 ~~C~C~------~G~~~~g~~C~-dideC~~~---p~~c--~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~---~~~eC~~   66 (245)
                      ..|.|+      +||.  |..|+ ++++|...   ++..  +++|.+    ..|.|++||+    |..|+   +.+.|..
T Consensus       493 G~C~C~~~~~~~~G~~--G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~~----G~~Cec~~~~~~C~~  562 (687)
T 3k6s_B          493 GQCLCHTSDVPGKLIY--GQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFE----GSACQCERTTEGCLN  562 (687)
T ss_dssp             TEEEECCCCSTTCCEE--STTSCEESSCSCEETTEETSHHHHEEEET----TEEEECTTCC----STTSCSCCSSCTTBC
T ss_pred             CEEEcCCCCCCCCCcc--ccccccccccccCCCCcCcCCCCCCeEEC----CEEEcCCCCc----CCCCccCCCCCCCCC
Confidence            369999      9999  99998 78888742   2333  567874    3899999999    88887   3567865


Q ss_pred             C-CCCCC-CCeEeecCCcceecCCCCceeCCCCCceee
Q psy11798         67 N-EGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCID  102 (245)
Q Consensus        67 ~-~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~  102 (245)
                      . ...|. +|.|..    ..|.|.+||    .|..|..
T Consensus       563 ~~g~~Cs~~G~C~~----g~C~C~~Gy----~G~~Ce~  592 (687)
T 3k6s_B          563 PRRVECSGRGRCRC----NVCECHSGY----QLPLCQE  592 (687)
T ss_dssp             TTCSBTSSSCCBCS----SCBCCSTTC----CTTTTCC
T ss_pred             CCCCCCCCCCcCCC----CEEECCCCC----cCCCCCC
Confidence            3 23477 678876    479999999    7888853

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.76  E-value=1.3e-05  Score=50.24  Aligned_cols=40  Identities=25%  Similarity=0.688  Sum_probs=31.0

Q ss_pred             CeeE-eccccccCCCCCC-CCeE-----eecCCcceecCCCCceeCCCCCcee
Q psy11798         56 RHCI-DINECKENEGICE-DGKC-----INIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        56 ~~C~-~~~eC~~~~~~C~-~~~C-----~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      ..|+ ++|||...|  |. .|+|     ++..++|.|.|++||    .|..|+
T Consensus         2 ~~c~~~~~eC~s~p--C~NgGtC~~~~~~d~~~~y~C~C~~g~----~G~~CE   48 (55)
T 3u7u_G            2 TSHLVKCAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCPNEF----TGDRCQ   48 (55)
T ss_dssp             -CCEEECCSTTTTT--SCTTCEEEEECCC--CCCEEEEECTTE----ESTTSC
T ss_pred             CCCcccCCCCcCCC--CCCCCCcCCCCccCCCCCEeEeCCCCC----cCCCcC
Confidence            3454 899999877  99 5699     466789999999999    688884

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.74  E-value=7.4e-06  Score=68.35  Aligned_cols=46  Identities=24%  Similarity=0.582  Sum_probs=35.4

Q ss_pred             ccccccCCCCCCC--CCeeeeCCCCceEeCCCCceeCCCCCeeEeccccc
Q psy11798         18 EDINECLELSNQC--AFRCHNVPGSFRCICPYGYALAPDGRHCIDINECK   65 (245)
Q Consensus        18 ~dideC~~~p~~c--~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~   65 (245)
                      +|+|||....+.|  ++.|.|+.|+|.|.|++||..  +|..|.++|+..
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~G--nG~~C~d~d~Pq   50 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG--NGRQCVAEGSPQ   50 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEE--CSSSEEETTCEE
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCC--CCCcCCCCCCCc
Confidence            5899998666667  578999999999999999984  478899988744

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.74  E-value=2.2e-05  Score=45.41  Aligned_cols=35  Identities=37%  Similarity=0.921  Sum_probs=29.6

Q ss_pred             eccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         60 DINECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        60 ~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      ++++|...|  |. +++|++..++|.|.|++||    .|..|
T Consensus         2 d~d~C~~~p--C~ngg~C~~~~~~~~C~C~~G~----~G~~C   37 (39)
T 1edm_B            2 DGDQCESNP--CLNGGSCKDDINSYECWCPFGF----EGKNC   37 (39)
T ss_dssp             CCCTTTTCC--CCTTCEEEEETTEEEEECCTTC----CSTTS
T ss_pred             ccccCCCCC--CCCCCEeEcCCCceEeECCCCC----cCCcc
Confidence            578898766  98 4699999999999999999    57666

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.71  E-value=3.4e-06  Score=52.29  Aligned_cols=40  Identities=18%  Similarity=0.400  Sum_probs=32.8

Q ss_pred             ccccCCCCeeCCCccccccccCCCCCCCCCeeee----CCCCceEeCCCCceeCCCCCeeE
Q psy11798          3 TTMSVTGYRLRVETCEDINECLELSNQCAFRCHN----VPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus         3 ~C~C~~G~~~~g~~C~dideC~~~p~~c~~~C~n----~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +|.|++||.             ++|+.++++|++    ..++|.|.|++||+    |.+|+
T Consensus         4 ~C~C~~g~~-------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce   47 (52)
T 3ca7_A            4 TYKCPETFD-------------AWYCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCE   47 (52)
T ss_dssp             CBCCCHHHH-------------HHTSCTTCEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred             eeECCCCCc-------------CCcCCCCCEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence            688999986             346667899997    35689999999999    88886

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.69  E-value=1.2e-05  Score=48.53  Aligned_cols=36  Identities=25%  Similarity=0.489  Sum_probs=30.0

Q ss_pred             cccccCC---CCCCCCCeeeeCC--CCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLE---LSNQCAFRCHNVP--GSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~---~p~~c~~~C~n~~--gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      ++++|.+   +|+.+ ++|.+..  ++|.|.|++||+    |.+|+
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~Gyt----G~~Ce   42 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYT----GVRCE   42 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCc----cCCCC
Confidence            5788887   78777 7999754  689999999999    88886

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.69  E-value=1.6e-05  Score=64.23  Aligned_cols=82  Identities=29%  Similarity=0.656  Sum_probs=58.2

Q ss_pred             CccccCCCCeeCCCccc-ccc---------ccCCC--CCCC--CCeeeeCCCCceEeCCCC------ceeCCCCCeeE-e
Q psy11798          2 STTMSVTGYRLRVETCE-DIN---------ECLEL--SNQC--AFRCHNVPGSFRCICPYG------YALAPDGRHCI-D   60 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~-did---------eC~~~--p~~c--~~~C~n~~gsy~C~C~~G------y~~~~~g~~C~-~   60 (245)
                      ..|.|.+||.  |..|+ +++         .|...  +..|  +++|.+    ..|.|.+|      |.    |..|+ +
T Consensus       107 g~C~C~~G~~--G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~~~----G~~Ce~~  176 (217)
T 2p28_B          107 GICRCDTGYI--GKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKLIY----GQYCECD  176 (217)
T ss_dssp             TEEEECTTEE--STTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCCEE----STTSCEE
T ss_pred             CEEECCCCcc--CCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCcccEE----CCCcccC
Confidence            4699999999  88887 443         36532  2234  678874    47999999      57    88897 5


Q ss_pred             ccccccCC-CCCC-C--CeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         61 INECKENE-GICE-D--GKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        61 ~~eC~~~~-~~C~-~--~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      ++.|.... ..|. +  |+|..    ..|.|.+||    .|..|.
T Consensus       177 ~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~----~G~~C~  213 (217)
T 2p28_B          177 TINCERYNGQVCGGPGRGLCFC----GKCRCHPGF----EGSACQ  213 (217)
T ss_dssp             SSCSCEETTEETTCTTTEEEET----TEEEECTTE----ESTTSC
T ss_pred             CccCCCCCCCCCCCCCCcEEeC----CeeECCCCC----ccCCcC
Confidence            67786431 2476 5  78985    389999999    576663

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.66  E-value=8.1e-06  Score=73.42  Aligned_cols=77  Identities=22%  Similarity=0.574  Sum_probs=37.3

Q ss_pred             ccccCCCCeeCCCccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCCCCCC-CCeEeecCC
Q psy11798          3 TTMSVTGYRLRVETCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICE-DGKCINIAG   81 (245)
Q Consensus         3 ~C~C~~G~~~~g~~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~-~~~C~~~~g   81 (245)
                      .+.|.+||.  +..|+ +++|.. +|. +++|.+.   +.|.|++||+    |..|+ +++|.. +  |. +++|++.  
T Consensus       378 p~~C~~~~~--g~~c~-~~~C~~-~C~-nG~C~~~---~~C~C~~G~~----G~~C~-~~~C~~-~--C~~~g~C~~~--  439 (463)
T 2wg3_C          378 PEECRATVQ--PAQTL-TSECSR-LCR-NGYCTPT---GKCCCSPGWE----GDFCR-TAKCEP-A--CRHGGVCVRP--  439 (463)
T ss_dssp             CGGGCCCCC--CCCCC-CCHHHH-HCC-SEEECTT---SCEEECTTEE----STTSC-EECC------------------
T ss_pred             cccCCCCCc--CCCCc-cccccC-CCC-CCccCCC---CeECCCCCcC----CCcCC-cCcCCC-C--CCCCCEECCC--
Confidence            468999998  77786 567865 444 4788753   5899999999    88894 677875 4  88 4699865  


Q ss_pred             cceecCCCCceeCCCCCceee
Q psy11798         82 GVTCECPEGFMLSPNGMKCID  102 (245)
Q Consensus        82 ~~~C~C~~g~~l~~~g~~C~~  102 (245)
                       +.|.|++||    .+..|+.
T Consensus       440 -~~C~C~~G~----~G~~C~~  455 (463)
T 2wg3_C          440 -NKCLCKKGY----LGPQCEQ  455 (463)
T ss_dssp             ---------------------
T ss_pred             -CEEECCCCc----ccCCCCC
Confidence             699999999    6878753

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.57  E-value=2.1e-05  Score=71.76  Aligned_cols=89  Identities=25%  Similarity=0.475  Sum_probs=28.3

Q ss_pred             CceE-eCCCCceeCCCCCeeEeccccccCCCCCC-CCeEeec----CCcceecCCCCceeCCCCCceee---------cC
Q psy11798         40 SFRC-ICPYGYALAPDGRHCIDINECKENEGICE-DGKCINI----AGGVTCECPEGFMLSPNGMKCID---------VR  104 (245)
Q Consensus        40 sy~C-~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~-~~~C~~~----~g~~~C~C~~g~~l~~~g~~C~~---------~~  104 (245)
                      ++.| .|++||.    +..|...+.|..-+  |. .+.|.+.    ...+.|.|++||    .|..|..         .+
T Consensus       417 G~~C~~C~~Gy~----G~~c~~~~~C~~C~--C~~~gtc~~~~~Cd~~tg~C~C~~g~----~G~~Ce~C~~G~~g~~~~  486 (525)
T 4aqs_A          417 GERCDVCKEGFY----DLSAEDPYGCKSCA--CNPLGTIPGGNPCDSETGYCYCKRLV----TGQRCDQCLPQHWGLSND  486 (525)
T ss_dssp             TTTTCEECTTEE----CCCTTSTTSSEECC--CCTTTBCCSSCCBCTTTCCBCBCTTC----CSTTTCC-----------
T ss_pred             CCcccCCCCCCc----CCCCCCCCCCccCC--CCCCceecCCCcccCCCCEEECCCCC----cCCCcccCCCCccCCCCC
Confidence            3445 5666666    44444444454322  43 2333322    234579999999    6777731         11


Q ss_pred             cccccCCCcccCccCCc--cC--CCCCceEecCCCccCCCCCc
Q psy11798        105 QDVCYDSYQEGTCTLLR--KQ--PITVKECCCSMGQAWGRYCL  143 (245)
Q Consensus       105 ~~~C~~~~~~~~C~~~~--~~--~~~~~~C~C~~G~~~G~~C~  143 (245)
                      ...|    ..-.|.+..  ..  ....+.|.|++||. |.+|+
T Consensus       487 ~~~C----~~C~C~~~gs~~~~C~~~tG~C~C~~G~~-G~~Ce  524 (525)
T 4aqs_A          487 LDGC----RPCDCDLGGALNNSCSEDSGQCSCLPHMI-GRQCN  524 (525)
T ss_dssp             -------------------------------------------
T ss_pred             CCCC----cCCCCCCCCccCCccCCCCCeeECCCCCc-CCCCC
Confidence            1124    122344333  11  12235799999998 98886

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.54  E-value=4.8e-05  Score=50.24  Aligned_cols=40  Identities=33%  Similarity=0.586  Sum_probs=29.8

Q ss_pred             eccccccCCCCCC-CCeEeecCCcceec-CCCCceeCCCCCc
Q psy11798         60 DINECKENEGICE-DGKCINIAGGVTCE-CPEGFMLSPNGMK   99 (245)
Q Consensus        60 ~~~eC~~~~~~C~-~~~C~~~~g~~~C~-C~~g~~l~~~g~~   99 (245)
                      |||||...++.|. ++.|+|+.|+|+|. +..||.....+..
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~   43 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEG   43 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSS
T ss_pred             ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCc
Confidence            6899987667797 45899999999997 4457755544443

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.54  E-value=1.1e-05  Score=51.72  Aligned_cols=43  Identities=21%  Similarity=0.582  Sum_probs=33.4

Q ss_pred             eEeccccccCCCCCCC---CeEeecCCcceecCCCCceeCCCCCceeecCc
Q psy11798         58 CIDINECKENEGICED---GKCINIAGGVTCECPEGFMLSPNGMKCIDVRQ  105 (245)
Q Consensus        58 C~~~~eC~~~~~~C~~---~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~  105 (245)
                      ++++|+|...|  |.+   ++|++..++|.|.|++||.+   |..|.+..+
T Consensus         8 ~~~~d~C~snP--C~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C~~~~~   53 (61)
T 2k2s_B            8 SETPAACSSNP--CGPEAAGTCKETNSGYICRCNQGYRI---SLDGTGNVT   53 (61)
T ss_dssp             TTSCCHHHHCS--SCSSSCCEEEECSSEEEEECCTTEEE---EECSSSCEE
T ss_pred             cCCCCcCcCCC--CcCCCccccccCCCceEeECCCCCcc---CCCCCCCCE
Confidence            56789998777  984   59999999999999999931   566654444

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=97.52  E-value=6.1e-05  Score=63.14  Aligned_cols=47  Identities=30%  Similarity=0.745  Sum_probs=41.1

Q ss_pred             cccccCCC-CCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccccc
Q psy11798         19 DINECLEL-SNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECK   65 (245)
Q Consensus        19 dideC~~~-p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~   65 (245)
                      ++|||..+ +..|.+.|.|+.++|+|.|+.||.+..+++.|...++|.
T Consensus         1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~   48 (283)
T 3f1s_B            1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA   48 (283)
T ss_dssp             --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred             CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence            46899877 778999999999999999999999999999999888764

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.41  E-value=7.9e-05  Score=64.26  Aligned_cols=43  Identities=40%  Similarity=0.926  Sum_probs=29.1

Q ss_pred             ccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccc
Q psy11798         20 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINE   63 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~e   63 (245)
                      ||||. .+..|.+.|.|++++|.|.|++||.+.++++.|...++
T Consensus         1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~   43 (349)
T 3v64_C            1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGP   43 (349)
T ss_dssp             ---------CCSSEECCC---CCEECCTTEEECTTSSCEEESSS
T ss_pred             CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCccccccc
Confidence            58897 56789999999999999999999999999999986543

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.40  E-value=5.5e-05  Score=57.92  Aligned_cols=43  Identities=21%  Similarity=0.547  Sum_probs=35.2

Q ss_pred             ccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEecccccc
Q psy11798         20 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECKE   66 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~   66 (245)
                      +++|.+.|+..+++|.+..++|.|.|++||.    |..|+.+++|..
T Consensus       119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~~  161 (162)
T 1g1s_A          119 TASCQDMSCSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDDD  161 (162)
T ss_dssp             ECCCCTTGGGGSEEEEECSSSEEEEECTTEE----STTSCEECC---
T ss_pred             eCCCcCCCCCCCCEEecCCCCceEeCCCCCc----CcccccCcccCC
Confidence            4667777766689999999999999999999    889998888864

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=97.38  E-value=9.8e-05  Score=56.34  Aligned_cols=44  Identities=36%  Similarity=0.786  Sum_probs=37.0

Q ss_pred             cccccccCCC-CCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEe
Q psy11798         17 CEDINECLEL-SNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID   60 (245)
Q Consensus        17 C~dideC~~~-p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~   60 (245)
                      +.++|||... ...|.+.|.|..++|.|.|.+||++..+++.|++
T Consensus       114 ~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~  158 (159)
T 1nzi_A          114 ATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV  158 (159)
T ss_dssp             EEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred             cccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence            5588999753 2467889999999999999999999999998864

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=97.33  E-value=0.00022  Score=55.06  Aligned_cols=53  Identities=32%  Similarity=0.718  Sum_probs=42.2

Q ss_pred             CCceeCCCCCeeEeccccccCCCC---CCCCeEeecCCcceecCCCCceeCCCCCceeec
Q psy11798         47 YGYALAPDGRHCIDINECKENEGI---CEDGKCINIAGGVTCECPEGFMLSPNGMKCIDV  103 (245)
Q Consensus        47 ~Gy~~~~~g~~C~~~~eC~~~~~~---C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~  103 (245)
                      .||.+   ...+.+++||...++.   |.+ .|.++.++|.|.|++||.+..+++.|.++
T Consensus       113 ~Gf~~---~~~~~di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~  168 (170)
T 1szb_A          113 TGFEA---FYAAEDIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ  168 (170)
T ss_dssp             CEEEE---EEEEEECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred             cCcee---eeeccccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence            56653   2346789999876543   876 89999999999999999998889988654

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.25  E-value=9.1e-05  Score=67.58  Aligned_cols=85  Identities=20%  Similarity=0.394  Sum_probs=31.6

Q ss_pred             ccCCCCeeCCCccccccccCCCCCCCCCeeeeC----CCCceEeCCCCceeCCCCCeeE-----------eccccccCCC
Q psy11798          5 MSVTGYRLRVETCEDINECLELSNQCAFRCHNV----PGSFRCICPYGYALAPDGRHCI-----------DINECKENEG   69 (245)
Q Consensus         5 ~C~~G~~~~g~~C~dideC~~~p~~c~~~C~n~----~gsy~C~C~~Gy~~~~~g~~C~-----------~~~eC~~~~~   69 (245)
                      .|++||.  |..|++.+.|...++...+.|.+.    ..++.|.|++||+    |..|+           ++++|..-+ 
T Consensus       422 ~C~~Gy~--G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~----G~~Ce~C~~G~~g~~~~~~~C~~C~-  494 (525)
T 4aqs_A          422 VCKEGFY--DLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVT----GQRCDQCLPQHWGLSNDLDGCRPCD-  494 (525)
T ss_dssp             EECTTEE--CCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCC----STTTCC--------------------
T ss_pred             CCCCCCc--CCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCc----CCCcccCCCCccCCCCCCCCCcCCC-
Confidence            5666766  566666666665443334555443    3467899999998    77774           345565433 


Q ss_pred             CCC-CCeEeec--CCcceecCCCCceeCCCCCcee
Q psy11798         70 ICE-DGKCINI--AGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        70 ~C~-~~~C~~~--~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                       |. .+.+.+.  .....|.|++||    .|..|.
T Consensus       495 -C~~~gs~~~~C~~~tG~C~C~~G~----~G~~Ce  524 (525)
T 4aqs_A          495 -CDLGGALNNSCSEDSGQCSCLPHM----IGRQCN  524 (525)
T ss_dssp             -----------------------------------
T ss_pred             -CCCCCccCCccCCCCCeeECCCCC----cCCCCC
Confidence             54 2233332  223479999999    677773

>1ksq_A Latent transforming growth factor beta binding protein 1; structure, LTBP-1, TGF-beta, TB domain, latency associated propeptide, LAP; NMR {Homo sapiens} SCOP: g.23.1.1

Probab=97.21  E-value=8.1e-06  Score=54.40  Aligned_cols=59  Identities=31%  Similarity=0.745  Sum_probs=47.4

Q ss_pred             cccCCCcc-cCccCCccCCCCCceEecCCCccCCCCCcc--CCCCCCCCCceeccCCCCCeeE
Q psy11798        107 VCYDSYQE-GTCTLLRKQPITVKECCCSMGQAWGRYCLP--CPSPNSGEPATFWSHYPKGFFF  166 (245)
Q Consensus       107 ~C~~~~~~-~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~--C~~~~~~~~~~~c~~~~~g~~~  166 (245)
                      .|+..+.. +.|.+.....+.+..|.|..|.+||..|++  ||..++.+|..+||+ ..||+.
T Consensus        11 ~Cy~~~~~~~~Cs~pl~~~~tk~~CCC~~G~~WG~~ce~~~CP~~gt~~f~~lCP~-G~G~~~   72 (75)
T 1ksq_A           11 ECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMCPK-GKGFVP   72 (75)
T ss_dssp             EEESSBCTTTTCBCSSCCEEEHHHHHHTCCSEEEETTEEEECCCSSSHHHHHHCSS-CSCCSS
T ss_pred             CceeccccCCcCCCcccCccccccccccccCccCCCCCccCCCCCCHHHHHhcCCC-CcccCc
Confidence            47776665 578776655556778999999999999996  999999999999997 556653

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.19  E-value=0.00041  Score=42.88  Aligned_cols=39  Identities=28%  Similarity=0.822  Sum_probs=30.5

Q ss_pred             eccccccC-CCCCCC-CeEe--ecCCcceecCCCCceeCCCCCceee
Q psy11798         60 DINECKEN-EGICED-GKCI--NIAGGVTCECPEGFMLSPNGMKCID  102 (245)
Q Consensus        60 ~~~eC~~~-~~~C~~-~~C~--~~~g~~~C~C~~g~~l~~~g~~C~~  102 (245)
                      ++++|... ...|.+ |+|+  +..++|.|.|++||    .|..|+.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~----~G~~Ce~   44 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGY----SGDRCQT   44 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTC----CSSSSCC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCC----cCCcCCc
Confidence            57888764 123984 6999  78899999999999    7888853

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.15  E-value=0.00012  Score=61.11  Aligned_cols=45  Identities=24%  Similarity=0.666  Sum_probs=35.3

Q ss_pred             EeccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCceeecCc
Q psy11798         59 IDINECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQ  105 (245)
Q Consensus        59 ~~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~  105 (245)
                      +|+|||....+.|. ++.|+|+.|+|.|.|++||..  +|..|.++++
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~G--nG~~C~d~d~   48 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG--NGRQCVAEGS   48 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEE--CSSSEEETTC
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCC--CCCcCCCCCC
Confidence            37899986667797 679999999999999999964  6888988876

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.00  E-value=0.0003  Score=42.16  Aligned_cols=36  Identities=31%  Similarity=0.908  Sum_probs=28.6

Q ss_pred             ecccccc---CCCCCCCCeEeecC--CcceecCCCCceeCCCCCcee
Q psy11798         60 DINECKE---NEGICEDGKCINIA--GGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        60 ~~~eC~~---~~~~C~~~~C~~~~--g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      ++++|..   .|  |.+|+|++..  ++|.|.|++||    .|..|+
T Consensus         2 ~i~~C~~~~~~p--C~nG~C~~~~~~~~~~C~C~~Gy----tG~~Ce   42 (46)
T 1k36_A            2 SITKCSSDMNGY--CLHGQCIYLVDMSQNYCRCEVGY----TGVRCE   42 (46)
T ss_dssp             CEECCCTTCCSS--CSSEEEEEETTTTEEEEEECTTC----SSTTSC
T ss_pred             ccccCCCCCCCC--CCCCEeeccCCCCCEEEECCCCC----ccCCCC
Confidence            4677865   45  9888998754  68999999999    788874

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=96.97  E-value=0.00077  Score=54.31  Aligned_cols=94  Identities=24%  Similarity=0.491  Sum_probs=59.7

Q ss_pred             CCeeeeCCCCceEeCCCCceeCCCCCeeE-ecc---------ccccC--CCCCC-CCeEeecCCcceecCCCCceeC--C
Q psy11798         31 AFRCHNVPGSFRCICPYGYALAPDGRHCI-DIN---------ECKEN--EGICE-DGKCINIAGGVTCECPEGFMLS--P   95 (245)
Q Consensus        31 ~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-~~~---------eC~~~--~~~C~-~~~C~~~~g~~~C~C~~g~~l~--~   95 (245)
                      +++|..    ..|.|.+||.    |..|+ +.+         .|...  ...|. +|.|+.    ..|.|.+||...  .
T Consensus       101 ~G~C~~----g~C~C~~G~~----G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~~  168 (217)
T 2p28_B          101 KGFLEC----GICRCDTGYI----GKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKLI  168 (217)
T ss_dssp             SEEEET----TEEEECTTEE----STTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCCE
T ss_pred             CceEEC----CEEECCCCcc----CCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCcccE
Confidence            677864    5899999999    88886 322         35432  23476 678984    379999993100  0


Q ss_pred             CCCcee-ecCcccccCCCcccCccCC--c--cCCCCCceEecCCCccCCCCCcc
Q psy11798         96 NGMKCI-DVRQDVCYDSYQEGTCTLL--R--KQPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus        96 ~g~~C~-~~~~~~C~~~~~~~~C~~~--~--~~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      .|..|+ ++..  |... ...+|...  +  ..    ..|.|.+||. |..|+.
T Consensus       169 ~G~~Ce~~~~~--C~~~-~g~~C~~~~~G~C~~----g~C~C~~G~~-G~~C~~  214 (217)
T 2p28_B          169 YGQYCECDTIN--CERY-NGQVCGGPGRGLCFC----GKCRCHPGFE-GSACQH  214 (217)
T ss_dssp             ESTTSCEESSC--SCEE-TTEETTCTTTEEEET----TEEEECTTEE-STTSCE
T ss_pred             ECCCcccCCcc--CCCC-CCCCCCCCCCcEEeC----CeeECCCCCc-cCCcCC
Confidence            577784 3334  6331 12246543  2  22    3899999999 998864

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=96.90  E-value=0.00069  Score=56.63  Aligned_cols=48  Identities=27%  Similarity=0.665  Sum_probs=41.1

Q ss_pred             eccccccC-CCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccc
Q psy11798         60 DINECKEN-EGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        60 ~~~eC~~~-~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      +.|||... ++.|.+ .|.++.++|.|.|..||.+..+++.|.+.++..|
T Consensus         1 ~~~eC~~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~C   49 (283)
T 3f1s_B            1 AKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCAC   49 (283)
T ss_dssp             --CCCCSSCSSSCSS-BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCT
T ss_pred             CCCccCCCCCCCCCC-EeeCCCCCeEecCCCCcccCCCCCcccccccccc
Confidence            36899876 678987 8999999999999999999999999998888666

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=96.78  E-value=0.0032  Score=44.04  Aligned_cols=59  Identities=25%  Similarity=0.597  Sum_probs=49.9

Q ss_pred             CCeeee-CCCCceEeCCCCceeCCCCCeeEeccc-cccCCCCCC-CCeEeecC-CcceecCCCCc
Q psy11798         31 AFRCHN-VPGSFRCICPYGYALAPDGRHCIDINE-CKENEGICE-DGKCINIA-GGVTCECPEGF   91 (245)
Q Consensus        31 ~~~C~n-~~gsy~C~C~~Gy~~~~~g~~C~~~~e-C~~~~~~C~-~~~C~~~~-g~~~C~C~~g~   91 (245)
                      .+.|.+ .+|...|.|..||..  +|..|+.++. |....+.|. ++.|+.+. ..-.|.|..+|
T Consensus        21 NA~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~   83 (105)
T 1n1i_A           21 NAACYRYLDGTEEWRCLLGFKE--VGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEG   83 (105)
T ss_dssp             TEEEEECTTSCEEEEECTTEEE--CSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred             CCCeEECCCCCEeEEEECCeec--cCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence            678988 678899999999996  4778998888 877778898 88999885 67889999886

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.75  E-value=0.00043  Score=42.84  Aligned_cols=31  Identities=23%  Similarity=0.494  Sum_probs=26.1

Q ss_pred             CCCCCCCCeee--eCCCCceEeCCCCceeCCCCCeeE
Q psy11798         25 ELSNQCAFRCH--NVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        25 ~~p~~c~~~C~--n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      ++|+.++++|+  +..++|.|.|++||+    |.+|+
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce   43 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYI----GERCQ   43 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCc----CCCCC
Confidence            45666789998  677899999999999    88886

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}

Probab=96.71  E-value=0.0033  Score=52.21  Aligned_cols=133  Identities=22%  Similarity=0.353  Sum_probs=75.4

Q ss_pred             eccccccCC---CCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCcccC-ccCCccCCCCCceEecCCC
Q psy11798         60 DINECKENE---GICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGT-CTLLRKQPITVKECCCSMG  135 (245)
Q Consensus        60 ~~~eC~~~~---~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~-C~~~~~~~~~~~~C~C~~G  135 (245)
                      +.++|....   ..|.+ .|.+..+++.|.|.+||.+..+.+.|..  .  |-...-... ..-..++.++.|       
T Consensus       120 ~~~~C~~~~~~~~~c~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~--~--Cgg~~~~~~~G~i~SP~yP~~Y-------  187 (278)
T 3dem_A          120 DVDECKEREDEELSCDH-YCHNYIGGYYCSCRFGYILHTDNRTCRV--E--CSDNLFTQRTGVITSPDFPNPY-------  187 (278)
T ss_dssp             ECCTTTC-----CCCSS-EEEEETTEEEEECCTTCEECTTSSCEEC--C--CCCCCBCSSEEEEESTTTTSCC-------
T ss_pred             ccccCCCCCCCcccCCc-CcCCccCCcEEEeCCcceeccCCCCCcc--c--CCCceecCCccceeCCCCCCCC-------
Confidence            566775432   24765 7999999999999999999888777742  2  511100000 000113333333       


Q ss_pred             ccCCCCCccCCCCCCCCCceeccCCCCCeeEee-e----eee------eeeccCcccCCCCceeeeccccCCccCccccc
Q psy11798        136 QAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVL-F----FLV------IFWSILPIYKTIKDITILSVCAYNMKQTTLHY  204 (245)
Q Consensus       136 ~~~G~~C~~C~~~~~~~~~~~c~~~~~g~~~~~-~----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (245)
                                |.+..+.|....+   .|+.+.. |    ..+      +.++.+.++++..  .+.+.|+...+..+.+.
T Consensus       188 ----------p~~~~C~w~i~~~---~g~~i~l~f~~~f~le~~~~~~C~~D~l~i~dg~~--~~~~~CG~~~p~~~~s~  252 (278)
T 3dem_A          188 ----------PKSSECLYTIELE---EGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPK--VLGPFCGEKAPEPISTQ  252 (278)
T ss_dssp             ----------CSSCEEEEEEECC---TTCCEEEEECSCCBBCCCSSSSSSSCEEEEEETTE--EEEEECBSSCCCCEECS
T ss_pred             ----------CCcCeEEEEEEeC---CCcEEEEEEccccccccCCCCCCCCCEEEEecCCc--ccccccCCCCCCCEEEc
Confidence                      2233344444432   3333221 1    111      1244555555431  36789988777778889


Q ss_pred             cceEeEEeeehhHHH
Q psy11798        205 TNFFFLNFLFDALLE  219 (245)
Q Consensus       205 ~~~~~~~~~~d~~~~  219 (245)
                      .+.+.+.|.+|.+++
T Consensus       253 ~~~l~v~F~sd~~~~  267 (278)
T 3dem_A          253 SHSVLILFHSDNSGE  267 (278)
T ss_dssp             CSEEEEEEECCSSCC
T ss_pred             CCEEEEEEEECCCCC
Confidence            999999999998643

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.70  E-value=0.00024  Score=63.80  Aligned_cols=79  Identities=23%  Similarity=0.548  Sum_probs=36.0

Q ss_pred             ceEeCCCCceeCCCCCeeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCcccCccCC
Q psy11798         41 FRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLL  120 (245)
Q Consensus        41 y~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~  120 (245)
                      ..+.|..+|.    +..|. +++|.. +  |.++.|++.   +.|.|++||    .+..|. +++  |.    . +|.+.
T Consensus       377 ~p~~C~~~~~----g~~c~-~~~C~~-~--C~nG~C~~~---~~C~C~~G~----~G~~C~-~~~--C~----~-~C~~~  433 (463)
T 2wg3_C          377 MPEECRATVQ----PAQTL-TSECSR-L--CRNGYCTPT---GKCCCSPGW----EGDFCR-TAK--CE----P-ACRHG  433 (463)
T ss_dssp             SCGGGCCCCC----CCCCC-CCHHHH-H--CCSEEECTT---SCEEECTTE----ESTTSC-EEC--C------------
T ss_pred             ccccCCCCCc----CCCCc-cccccC-C--CCCCccCCC---CeECCCCCc----CCCcCC-cCc--CC----C-CCCCC
Confidence            3467888887    66675 577865 3  887899753   589999999    677883 334  72    2 56654


Q ss_pred             ccCCCCCceEecCCCccCCCCCcc
Q psy11798        121 RKQPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       121 ~~~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      ..- ...+.|.|.+||. |..|+.
T Consensus       434 g~C-~~~~~C~C~~G~~-G~~C~~  455 (463)
T 2wg3_C          434 GVC-VRPNKCLCKKGYL-GPQCEQ  455 (463)
T ss_dssp             ------------------------
T ss_pred             CEE-CCCCEEECCCCcc-cCCCCC
Confidence            311 1126999999999 988874

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=96.65  E-value=0.0031  Score=43.84  Aligned_cols=59  Identities=31%  Similarity=0.742  Sum_probs=48.5

Q ss_pred             CCeeee-CCCCceEeCCCCceeCCCCCeeEec--cccccCCCCCC-CCeEeecC-----CcceecCCCCc
Q psy11798         31 AFRCHN-VPGSFRCICPYGYALAPDGRHCIDI--NECKENEGICE-DGKCINIA-----GGVTCECPEGF   91 (245)
Q Consensus        31 ~~~C~n-~~gsy~C~C~~Gy~~~~~g~~C~~~--~eC~~~~~~C~-~~~C~~~~-----g~~~C~C~~g~   91 (245)
                      .+.|.+ ..+...|.|.+||..  ++..|+.+  +.|...++.|. ++.|+...     +...|.|.++|
T Consensus        15 NA~C~r~~~g~e~C~C~~gy~g--dg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~   82 (99)
T 1ob1_C           15 NSGCFRHLDEREECKCLLNYKQ--EGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD   82 (99)
T ss_dssp             TEEEECCTTSCCEEEECTTEEE--ETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred             CCCeEEcCCCCEEEEecCCeec--CCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence            577887 468899999999995  57889876  57987778898 78998875     57889999987

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.59  E-value=0.0018  Score=38.46  Aligned_cols=27  Identities=30%  Similarity=0.786  Sum_probs=22.7

Q ss_pred             CC-CCeEe--ecCCcceecCCCCceeCCCCCcee
Q psy11798         71 CE-DGKCI--NIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        71 C~-~~~C~--~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      |. +|+|+  +..++|.|.|++||    .|..|+
T Consensus        11 C~ngg~C~~~~~~~~~~C~C~~G~----~G~~Ce   40 (45)
T 1a3p_A           11 CLNGGVXMHIESLDSYTCNCVIGY----SGDRCQ   40 (45)
T ss_dssp             CSSSCEEEECTTTSSEEEECCTTE----ETTTTC
T ss_pred             CCCCCEEEeecCCCCEEEEcCCCC----cCCcCC
Confidence            88 46998  67889999999999    577774

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=96.54  E-value=0.0011  Score=46.18  Aligned_cols=49  Identities=16%  Similarity=0.421  Sum_probs=40.7

Q ss_pred             CccccCCCCeeCCCccccc--cccCCCCCCC--CCeeeeCC-----CCceEeCCCCce
Q psy11798          2 STTMSVTGYRLRVETCEDI--NECLELSNQC--AFRCHNVP-----GSFRCICPYGYA   50 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~di--deC~~~p~~c--~~~C~n~~-----gsy~C~C~~Gy~   50 (245)
                      ..|+|.+||.++|..|..+  +.|..++..|  .+.|....     +...|.|.+||.
T Consensus        26 e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           26 EECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             EEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            5799999999999999865  5788777777  78898774     568999999975

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1

Probab=96.52  E-value=0.0052  Score=51.35  Aligned_cols=132  Identities=21%  Similarity=0.340  Sum_probs=75.6

Q ss_pred             eccccccCCC---CCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccccCC-CcccCccCCccCCCCCceEecCCC
Q psy11798         60 DINECKENEG---ICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDS-YQEGTCTLLRKQPITVKECCCSMG  135 (245)
Q Consensus        60 ~~~eC~~~~~---~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~-~~~~~C~~~~~~~~~~~~C~C~~G  135 (245)
                      +.++|...+.   .|.+ .|.+..++|.|.|.+||.+..+.+.|..  .  |... +......-..++.++.|       
T Consensus       119 ~~~~C~~~~~~~~~c~~-~C~n~~g~~~csC~~Gy~L~~d~~~C~~--~--Cg~~~~~~~~G~i~SP~yP~~Y-------  186 (286)
T 1nt0_A          119 DVDECRTSLGDSVPCDH-YCHXYLGGYYCSCRVGYILHQNKHTCSA--L--CSGQVFTGRSGFLSSPEYPQPY-------  186 (286)
T ss_dssp             ECCTTC-------CCSS-EEEEETTEEEEECCTTEEECTTSSCEEE--C--CEEEEECSSSEEEECTTTTSCC-------
T ss_pred             cCCccCCCCCCcccCCC-ccccccCceEeecCCCceeccCCCCccc--c--ccCceecCCceEEeCCCCCCCC-------
Confidence            4567754222   3665 8999999999999999999888777742  1  5111 01000000112333222       


Q ss_pred             ccCCCCCccCCCCCCCCCceeccCCCCCeeEeeee-----ee------eeeccCcccCCCCceeeeccccCCccCccccc
Q psy11798        136 QAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFF-----LV------IFWSILPIYKTIKDITILSVCAYNMKQTTLHY  204 (245)
Q Consensus       136 ~~~G~~C~~C~~~~~~~~~~~c~~~~~g~~~~~~~-----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (245)
                                |.+..+.|...-|   .|+.+...+     .+      +.++.+.++++.  -.+.+.|+...+..+.+.
T Consensus       187 ----------p~~~~C~w~I~~~---~g~~I~l~f~~~f~le~~~~~~C~~D~l~i~dg~--~~~~~~CG~~~p~~~~S~  251 (286)
T 1nt0_A          187 ----------PKLSSCAYNIRLE---EGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDK--REYGPFCGKTLPPRIETD  251 (286)
T ss_dssp             ----------CSSCEEEEEEECC---SSCEEEEEECSCCBBCCC----C--CEEEEECSS--CEEEEECBSSCCCCEECS
T ss_pred             ----------CCCCEEEEEEECC---CceEEEEEEeceEEeccCCCCCCCCcEEEEEeCC--cceEEEcCCCCCCCEEee
Confidence                      3333444544432   344332211     11      225666666653  236789988777778889


Q ss_pred             cceEeEEeeehhHH
Q psy11798        205 TNFFFLNFLFDALL  218 (245)
Q Consensus       205 ~~~~~~~~~~d~~~  218 (245)
                      .+.+.+.|++|.++
T Consensus       252 ~n~l~i~F~sd~~~  265 (286)
T 1nt0_A          252 SNKVTITFTTDESG  265 (286)
T ss_dssp             SSEEEEEEECCSCC
T ss_pred             CCEEEEEEEeCCCC
Confidence            99999999999875

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=96.48  E-value=0.0015  Score=41.78  Aligned_cols=40  Identities=28%  Similarity=0.701  Sum_probs=31.3

Q ss_pred             eccccccCCCCCCC-CeEee-----cCCcceecCCCCceeCCCCCcee-ecCc
Q psy11798         60 DINECKENEGICED-GKCIN-----IAGGVTCECPEGFMLSPNGMKCI-DVRQ  105 (245)
Q Consensus        60 ~~~eC~~~~~~C~~-~~C~~-----~~g~~~C~C~~g~~l~~~g~~C~-~~~~  105 (245)
                      ..++|...|  |.+ |+|++     ..++|.|.|++||    .|..|+ ++++
T Consensus         5 ~c~~C~~~p--C~ngG~C~~~~~~~~~~~y~C~C~~Gf----~G~~Ce~~i~~   51 (63)
T 1hae_A            5 KCAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCQPGF----TGARCTENVPM   51 (63)
T ss_dssp             ECCHHHHTT--SCTTCEEEEEESSSSSCCEEEECCTTE----ESTTSCEECCS
T ss_pred             ccCCCCCCc--CCCCcEEecCCccCCCCCEEEECCCCC----cCCccCcCcCc
Confidence            346787766  984 79996     6789999999999    688884 5665

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=96.46  E-value=0.0015  Score=56.10  Aligned_cols=43  Identities=35%  Similarity=0.869  Sum_probs=28.2

Q ss_pred             ccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCc
Q psy11798         61 INECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQ  105 (245)
Q Consensus        61 ~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~  105 (245)
                      +|||. .++.|.+ .|.|+.|+|.|.|++||.+.++++.|.+.++
T Consensus         1 i~ec~-~~~~C~~-~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~   43 (349)
T 3v64_C            1 VNECA-EEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALGP   43 (349)
T ss_dssp             ---------CCSS-EECCC---CCEECCTTEEECTTSSCEEESSS
T ss_pred             CcccC-CCCCCcC-eeecCCCCeEEECCCCccCCCCCCccccccc
Confidence            57887 4677987 8999999999999999999999999976543

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.38  E-value=0.0015  Score=59.77  Aligned_cols=36  Identities=28%  Similarity=0.623  Sum_probs=33.6

Q ss_pred             ccccCCCCCCCCCeeee-CCCCceEeCC-CCceeCCCCCeeE
Q psy11798         20 INECLELSNQCAFRCHN-VPGSFRCICP-YGYALAPDGRHCI   59 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n-~~gsy~C~C~-~Gy~~~~~g~~C~   59 (245)
                      +|+|.++||.++++|.+ ..++|.|.|+ +||+    |++|+
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   39 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT   39 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCC
Confidence            68899999999999999 8999999999 9999    99996

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.35  E-value=0.0035  Score=47.51  Aligned_cols=45  Identities=33%  Similarity=0.703  Sum_probs=36.3

Q ss_pred             eeEeccccccC-CCCCCCCeEeecCCcceecCCCCceeCCCCCceee
Q psy11798         57 HCIDINECKEN-EGICEDGKCINIAGGVTCECPEGFMLSPNGMKCID  102 (245)
Q Consensus        57 ~C~~~~eC~~~-~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~  102 (245)
                      .+.+++||... ...|.+ .|.+..++|.|.|.+||.+..+++.|.+
T Consensus       113 ~~~d~~eC~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~~~~~C~~  158 (159)
T 1nzi_A          113 VATDINECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCGV  158 (159)
T ss_dssp             EEEECCTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred             ecccCcccCCCCCCCCCC-cccCcCCCEEEecCCCcEECCCCCcccc
Confidence            46788999753 235765 8999999999999999999888888853

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=96.26  E-value=0.0037  Score=43.73  Aligned_cols=49  Identities=16%  Similarity=0.320  Sum_probs=41.5

Q ss_pred             CccccCCCCeeCCCccccccc-cCCCCCCC--CCeeeeCC-CCceEeCCCCce
Q psy11798          2 STTMSVTGYRLRVETCEDINE-CLELSNQC--AFRCHNVP-GSFRCICPYGYA   50 (245)
Q Consensus         2 ~~C~C~~G~~~~g~~C~dide-C~~~p~~c--~~~C~n~~-gsy~C~C~~Gy~   50 (245)
                      .+|+|..||.++|..|..++. |..+...|  .+.|.... ..-.|.|..+|.
T Consensus        32 e~CrCl~gY~~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           32 EEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             EEEEECTTEEECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred             EeEEEECCeeccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence            479999999999999997788 77766677  78999885 788999999974

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.11  E-value=0.00056  Score=42.08  Aligned_cols=40  Identities=30%  Similarity=0.643  Sum_probs=29.8

Q ss_pred             ceEeCCCCceeCCCCCeeEeccccccCCCCCC-CCeEee----cCCcceecCCCCceeCCCCCcee
Q psy11798         41 FRCICPYGYALAPDGRHCIDINECKENEGICE-DGKCIN----IAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        41 y~C~C~~Gy~~~~~g~~C~~~~eC~~~~~~C~-~~~C~~----~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      +.|.|++||+               ..+  |. .|+|++    ..++|.|.|++||    .|..|+
T Consensus         3 ~~C~C~~g~~---------------~~p--C~NGGtC~~~~~~~~~~y~C~C~~Gf----~G~~Ce   47 (52)
T 3ca7_A            3 PTYKCPETFD---------------AWY--CLNDAHCFAVKIADLPVYSCECAIGF----MGQRCE   47 (52)
T ss_dssp             CCBCCCHHHH---------------HHT--SCTTCEEEEEEETTEEEEEEECCTTE----ESTTSC
T ss_pred             eeeECCCCCc---------------CCc--CCCCCEEecCccCCCCCEEEECCCCC----cCCCCc
Confidence            4688999886               113  76 358986    3568999999999    677774

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=96.08  E-value=0.0027  Score=58.44  Aligned_cols=37  Identities=24%  Similarity=0.558  Sum_probs=32.7

Q ss_pred             ccccCCCCCCCCCeeee-CCCCceEeCC-CCceeCCCCCeeEe
Q psy11798         20 INECLELSNQCAFRCHN-VPGSFRCICP-YGYALAPDGRHCID   60 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n-~~gsy~C~C~-~Gy~~~~~g~~C~~   60 (245)
                      +|+|.++||.++++|.+ ..++|.|.|+ +||+    |++|+.
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCTT   39 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence            58899999999999996 4589999999 9999    999963

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=96.06  E-value=0.0058  Score=51.56  Aligned_cols=42  Identities=36%  Similarity=0.831  Sum_probs=35.6

Q ss_pred             ccccccCCC---CCCCCCeeeeCC------CCceEeCCCCceeCCCCCeeE
Q psy11798         18 EDINECLEL---SNQCAFRCHNVP------GSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        18 ~dideC~~~---p~~c~~~C~n~~------gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      .+.|+|..+   ...|.+.|.+.+      ++|+|.|+.||.+.++++.|.
T Consensus       265 ~~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~  315 (316)
T 1ijq_A          265 RGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL  315 (316)
T ss_dssp             CCCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             cccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence            367889866   557889999876      589999999999999999885

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.01  E-value=0.0044  Score=57.69  Aligned_cols=43  Identities=40%  Similarity=0.859  Sum_probs=38.6

Q ss_pred             cccccCCCCCCCCCeeeeCC-CCceEeCCCCceeCCCCCeeEec
Q psy11798         19 DINECLELSNQCAFRCHNVP-GSFRCICPYGYALAPDGRHCIDI   61 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~-gsy~C~C~~Gy~~~~~g~~C~~~   61 (245)
                      ++|+|..+...|.+.|.+.+ ++|.|.|++||.+.++++.|.+.
T Consensus       264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~  307 (628)
T 4a0p_A          264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP  307 (628)
T ss_dssp             CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred             cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence            67999877778999999999 99999999999999999999754

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=95.90  E-value=0.016  Score=44.27  Aligned_cols=21  Identities=29%  Similarity=0.638  Sum_probs=17.3

Q ss_pred             CceEecCCCccCCCCCccCCCC
Q psy11798        127 VKECCCSMGQAWGRYCLPCPSP  148 (245)
Q Consensus       127 ~~~C~C~~G~~~G~~C~~C~~~  148 (245)
                      ...|.|.+||. |.+|+.|+.+
T Consensus       130 tG~C~C~~g~~-G~~Cd~C~~g  150 (162)
T 1klo_A          130 TGQCQCLPHVS-GRDCGTCDPG  150 (162)
T ss_dssp             TCCCCBCTTEE-STTCCEECTT
T ss_pred             CCEeECCCCCc-CCCCCCCCCC
Confidence            35899999999 9999987654

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=95.72  E-value=0.0065  Score=51.51  Aligned_cols=43  Identities=30%  Similarity=0.651  Sum_probs=35.7

Q ss_pred             cccccCCCCCCCCCeeeeCCC--CceEeCCCCceeCCCCCeeEec
Q psy11798         19 DINECLELSNQCAFRCHNVPG--SFRCICPYGYALAPDGRHCIDI   61 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~g--sy~C~C~~Gy~~~~~g~~C~~~   61 (245)
                      ..++|..+...|.+.|...++  +|+|.|+.||.+..+++.|.|.
T Consensus       266 ~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~  310 (318)
T 3sov_A          266 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG  310 (318)
T ss_dssp             CCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred             cccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence            357787666678889999876  7999999999999999999763

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.45  E-value=0.0059  Score=38.34  Aligned_cols=30  Identities=20%  Similarity=0.497  Sum_probs=24.4

Q ss_pred             CCCCCCeeee----CCCCceEeCCCCceeCCCCCeeEe
Q psy11798         27 SNQCAFRCHN----VPGSFRCICPYGYALAPDGRHCID   60 (245)
Q Consensus        27 p~~c~~~C~n----~~gsy~C~C~~Gy~~~~~g~~C~~   60 (245)
                      |+.++++|..    ..+.|.|.|++||+    |.+|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEE----SSSSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCc----cCCCcc
Confidence            6667899983    44679999999999    888863

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=95.38  E-value=0.0085  Score=52.81  Aligned_cols=90  Identities=20%  Similarity=0.374  Sum_probs=28.4

Q ss_pred             CeeeeCCCCceEeCCCCceeCCCCCeeEeccccccCC--CCCCCCeE--eecCCcceec-CCCCceeCCCCCceeecCcc
Q psy11798         32 FRCHNVPGSFRCICPYGYALAPDGRHCIDINECKENE--GICEDGKC--INIAGGVTCE-CPEGFMLSPNGMKCIDVRQD  106 (245)
Q Consensus        32 ~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC~~~~--~~C~~~~C--~~~~g~~~C~-C~~g~~l~~~g~~C~~~~~~  106 (245)
                      ..|....+.+.|.|+.+++    |..|+.   |...-  ..+..+.+  ........|. |.-.+    .+..| +.+. 
T Consensus       304 s~C~~~~g~~~C~C~~~tt----G~~CE~---C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~----~g~~C-D~~t-  370 (426)
T 3zyj_B          304 TVCVYDNSKLTCECEHNTT----GPDCGK---CKKNYQGRPWSPGSYLPIPKGAANACIPSISSI----GTNVC-DNEL-  370 (426)
T ss_dssp             SCEEEETTEEEECCCTTEE----SSSSCE---ECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-----------------
T ss_pred             hhcCCCCCCceeeCCCCCc----CCCccc---cccccccCcccCCcccccCCCCCCcccCCCCCC----CcCcc-ccCc-
Confidence            5688877889999999999    888863   43210  11332322  1122334453 33222    23445 2222 


Q ss_pred             cccCCCcccCccCCc--cCCCCCceEecCCCccCCCCCccCC
Q psy11798        107 VCYDSYQEGTCTLLR--KQPITVKECCCSMGQAWGRYCLPCP  146 (245)
Q Consensus       107 ~C~~~~~~~~C~~~~--~~~~~~~~C~C~~G~~~G~~C~~C~  146 (245)
                              ++|.+++  .+..   +|.|++||. |..|+.|+
T Consensus       371 --------~~C~ngg~C~~~~---~C~C~~G~~-G~~Ce~c~  400 (426)
T 3zyj_B          371 --------LHCQNGGTCHNNV---RCLCPAAYT-GILCEKLR  400 (426)
T ss_dssp             ------------------------------------------
T ss_pred             --------ccCCCCCCcCCCC---CCcCCCCCc-CCCCcCCC
Confidence                    3344333  2222   899999999 99999743

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=95.28  E-value=0.029  Score=40.72  Aligned_cols=59  Identities=20%  Similarity=0.411  Sum_probs=39.7

Q ss_pred             CCCCCCeeeeCC--CCc-eEeCCCCceeCCCCCeeE-eccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceee
Q psy11798         27 SNQCAFRCHNVP--GSF-RCICPYGYALAPDGRHCI-DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCID  102 (245)
Q Consensus        27 p~~c~~~C~n~~--gsy-~C~C~~Gy~~~~~g~~C~-~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~  102 (245)
                      |+.++++|++..  .+| .|.|++||+    |..|+ +++      ..|..+    ....|++.+..++    .|+.|+.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~----G~~Ce~~~~------~~C~~g----~G~~YrG~~~~t~----sG~~Cq~   63 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCEIDKS------KTCYEG----NGHFYRGKASTDT----MGRPCLP   63 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEE----STTSCEESS------CCSBCS----SCTTCCSCCCBBT----TSCBBCC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCC----CccccccCc------CCCccc----ccccceeeccccc----cCCcccC
Confidence            566789999985  666 999999999    88886 332      113321    2335778777766    6777754


Q ss_pred             c
Q psy11798        103 V  103 (245)
Q Consensus       103 ~  103 (245)
                      -
T Consensus        64 W   64 (122)
T 2fd6_A           64 W   64 (122)
T ss_dssp             T
T ss_pred             c
Confidence            3

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=95.13  E-value=0.011  Score=54.75  Aligned_cols=41  Identities=37%  Similarity=0.867  Sum_probs=36.9

Q ss_pred             cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      ..++|..+...|.+.|.+.+++|.|.|+.||.+..+++.|.
T Consensus       577 ~~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~~~C~  617 (619)
T 3s94_A          577 GSNPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCI  617 (619)
T ss_dssp             CCCGGGSGGGGCSSEEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred             ccccCCCCCCChhHhhccCCCCeEEECCCCCEECCCCCcCC
Confidence            56888877778999999999999999999999999999886

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=94.96  E-value=0.012  Score=36.12  Aligned_cols=29  Identities=24%  Similarity=0.524  Sum_probs=22.4

Q ss_pred             cCccCCc--c--CCCCCceEecCCCccCCCCCcc
Q psy11798        115 GTCTLLR--K--QPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       115 ~~C~~~~--~--~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      ++|.+++  .  +..++|.|.|++||. |.+|+.
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~C~~Gyt-G~~Ce~   44 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACNCVVGYI-GERCQY   44 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEE-STTSCE
T ss_pred             CCCCCCeEEeeecCCCCEEEecCCCCc-CCCCCc
Confidence            4555544  3  567789999999999 999975

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=94.96  E-value=0.0084  Score=45.46  Aligned_cols=42  Identities=36%  Similarity=0.915  Sum_probs=32.7

Q ss_pred             eEeccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCceeecCcccc
Q psy11798         58 CIDINECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        58 C~~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      |+ .++|...+  |. ++.|++..++|.|.|++||    .|..|+.+++  |
T Consensus       117 Ce-~~~c~~~~--C~~~g~C~~~~~~~~c~C~~g~----~G~~Ce~~~~--c  159 (162)
T 1g1s_A          117 CY-TASCQDMS--CSKQGECLETIGNYTCSCYPGF----YGPECEYVRD--D  159 (162)
T ss_dssp             EE-ECCCCTTG--GGGSEEEEECSSSEEEEECTTE----ESTTSCEECC---
T ss_pred             EE-eCCCcCCC--CCCCCEEecCCCCceEeCCCCC----cCcccccCcc--c
Confidence            54 35666544  87 5799999999999999999    6888987776  7

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=92.96  E-value=0.065  Score=49.77  Aligned_cols=44  Identities=30%  Similarity=0.830  Sum_probs=37.6

Q ss_pred             eccccccCCCCCCCCeEeecC-CcceecCCCCceeCCCCCceeecC
Q psy11798         60 DINECKENEGICEDGKCINIA-GGVTCECPEGFMLSPNGMKCIDVR  104 (245)
Q Consensus        60 ~~~eC~~~~~~C~~~~C~~~~-g~~~C~C~~g~~l~~~g~~C~~~~  104 (245)
                      .+++|...++.|.+ .|.+.. ++|.|.|+.||.+..+++.|.+..
T Consensus       264 ~~n~C~~~ng~C~~-~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~  308 (628)
T 4a0p_A          264 GWNECASSNGHCSH-LCLAVPVGGFVCGCPAHYSLNADNRTCSAPT  308 (628)
T ss_dssp             CCCTTTTTGGGCSS-EEEEETTTEEEEECSTTCEECTTSSCEECCS
T ss_pred             cceEeccCCCCcch-hhhcCCCCCeeEEcCCCcEecccCCcCcccc
Confidence            57889876677987 899998 999999999999999999996543

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=92.48  E-value=0.094  Score=43.97  Aligned_cols=41  Identities=29%  Similarity=0.815  Sum_probs=33.4

Q ss_pred             eccccccC---CCCCCCCeEeecC------CcceecCCCCceeCCCCCcee
Q psy11798         60 DINECKEN---EGICEDGKCINIA------GGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        60 ~~~eC~~~---~~~C~~~~C~~~~------g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      ..++|...   ++.|.+ .|.+.+      ++|+|.|+.||.+..+++.|.
T Consensus       266 ~~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~  315 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL  315 (316)
T ss_dssp             CCCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             ccccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence            45788765   566887 899875      589999999999999998884

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=92.43  E-value=0.22  Score=37.21  Aligned_cols=29  Identities=24%  Similarity=0.559  Sum_probs=23.8

Q ss_pred             CCCCCCeeeeC--CCCc-eEeCCCCceeCCCCCeeE
Q psy11798         27 SNQCAFRCHNV--PGSF-RCICPYGYALAPDGRHCI   59 (245)
Q Consensus        27 p~~c~~~C~n~--~gsy-~C~C~~Gy~~~~~g~~C~   59 (245)
                      |+.++++|+..  ...| .|.|++||.    |+.|+
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~----G~~Ce   45 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCE   45 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEE----STTSC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCC----CCcee
Confidence            66678999876  3566 899999999    88886

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=92.40  E-value=0.11  Score=37.66  Aligned_cols=43  Identities=19%  Similarity=0.125  Sum_probs=33.3

Q ss_pred             CCc-eEecCCCccCCCCCcc-----CCCCCCCCCceeccCCCCCeeEeee
Q psy11798        126 TVK-ECCCSMGQAWGRYCLP-----CPSPNSGEPATFWSHYPKGFFFVLF  169 (245)
Q Consensus       126 ~~~-~C~C~~G~~~G~~C~~-----C~~~~~~~~~~~c~~~~~g~~~~~~  169 (245)
                      ..| .|.|++||. |..|++     |..+....|...+.....|..+..|
T Consensus        16 ~~~~~C~Cp~g~~-G~~Ce~~~~~~C~~g~G~~YrG~~~~t~sG~~Cq~W   64 (122)
T 2fd6_A           16 SNIHWCNCPKKFG-GQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPW   64 (122)
T ss_dssp             TTCEEEECCTTEE-STTSCEESSCCSBCSSCTTCCSCCCBBTTSCBBCCT
T ss_pred             CCCCCccCCCCCC-CccccccCcCCCcccccccceeeccccccCCcccCc
Confidence            345 999999999 999984     6555455788888877888888765

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=92.31  E-value=0.11  Score=45.46  Aligned_cols=40  Identities=30%  Similarity=0.569  Sum_probs=34.1

Q ss_pred             cc-cccccCCCCCCCCCeeeeCCCCceEeCCC-CceeCCCCCeeEe
Q psy11798         17 CE-DINECLELSNQCAFRCHNVPGSFRCICPY-GYALAPDGRHCID   60 (245)
Q Consensus        17 C~-dideC~~~p~~c~~~C~n~~gsy~C~C~~-Gy~~~~~g~~C~~   60 (245)
                      |+ ..++|.++||.++++|.+..++|.|.|+. ||.    |+.|++
T Consensus       181 C~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~  222 (410)
T 3asi_A          181 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCND  222 (410)
T ss_dssp             CCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred             CCCCCCCcccccCCCCCEecCCCCCceEeccCCccc----CCCCCC
Confidence            64 45789888988899999999999999996 998    888863

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=91.72  E-value=0.049  Score=40.75  Aligned_cols=36  Identities=22%  Similarity=0.552  Sum_probs=29.6

Q ss_pred             ccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         20 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +++|.+.|+...+.|.+...+|.|.|.+||.    |..|+
T Consensus       119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~----g~~Ce  154 (157)
T 1g1t_A          119 TAACTNTSCSGHGECVETINNYTCKCDPGFS----GLKCE  154 (157)
T ss_dssp             ECCCCTTGGGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred             cCCCCCCCCCCCCEeecCCCCeeEECCCCcc----Ccccc
Confidence            4566666655578999999999999999999    87775

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}

Probab=91.44  E-value=0.36  Score=41.29  Aligned_cols=134  Identities=20%  Similarity=0.310  Sum_probs=71.5

Q ss_pred             eccccccC---CCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCcccCccCCccCCCCCceEecCCCc
Q psy11798         60 DINECKEN---EGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMGQ  136 (245)
Q Consensus        60 ~~~eC~~~---~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~~G~  136 (245)
                      +.++|...   ...|.+ .|.+..+++.|.|..++.+..+...+....   |..........-...+.+..|        
T Consensus       120 ~~~~c~~~~~~~~~~~~-~c~n~~g~~~csC~~g~~l~~~~~~~~~~~---c~~~~~~~~G~i~SP~yP~~Y--------  187 (361)
T 4aqb_A          120 DVDECKEREDEELSCDH-YCHNYIGGYYCSCRFGYILHTDNRTCRVEC---SDNLFTQRTGVITSPDFPNPY--------  187 (361)
T ss_dssp             ECCGGGTGGGSSSCCSS-EEEEETTEEEEECCTTCEECTTSSCEECCC---CCCCBCSSEEEEESTTTTSCC--------
T ss_pred             cccccccccccCCCCCc-cCCccCCCceeccCCCeEEecccccccccc---ccceEeCCCcEEecCCCCCCC--------
Confidence            45566432   223444 899999999999999998877766653211   211001000000012222222        


Q ss_pred             cCCCCCccCCCCCCCCCceeccCCCCCeeEeeeee----e-------eeeccCcccCCCCceeeeccccCCccCcccccc
Q psy11798        137 AWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFFL----V-------IFWSILPIYKTIKDITILSVCAYNMKQTTLHYT  205 (245)
Q Consensus       137 ~~G~~C~~C~~~~~~~~~~~c~~~~~g~~~~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (245)
                               |....+.|....   +.|+.+...+.    .       +.++.+.++++.  -.+.+.|+...+.......
T Consensus       188 ---------p~~~~C~w~i~~---~~g~~i~l~f~~~~~~e~~~~~~C~~D~l~i~dg~--~~~~~~cG~~~p~~~~s~~  253 (361)
T 4aqb_A          188 ---------PKSSECLYTIEL---EEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGP--KVLGPFCGEKAPEPISTQS  253 (361)
T ss_dssp             ---------CSSCEEEEEEEC---CTTCEEEEEECSCCBBCCCSSSSSSSSEEEEEETT--EEEEEECBSSCCCCEECSC
T ss_pred             ---------CCCceeeEEeee---ccCcEEEEEEeecccccCCccCccCCCeEEEeeCC--eeEEeeCCCCCCCCEeecC
Confidence                     222233344433   33443332111    0       123344444432  1357889887777888899


Q ss_pred             ceEeEEeeehhHHH
Q psy11798        206 NFFFLNFLFDALLE  219 (245)
Q Consensus       206 ~~~~~~~~~d~~~~  219 (245)
                      +.+.+.|.+|.+.+
T Consensus       254 n~~~i~F~SD~~~~  267 (361)
T 4aqb_A          254 HSVLILFHSDNSGE  267 (361)
T ss_dssp             SEEEEEEECCSCCC
T ss_pred             CeEEEEEEeCCCCC
Confidence            99999999998764

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=91.44  E-value=0.12  Score=43.67  Aligned_cols=42  Identities=33%  Similarity=0.665  Sum_probs=33.4

Q ss_pred             ccccccCCCCCCCCeEeecCC--cceecCCCCceeCCCCCceeec
Q psy11798         61 INECKENEGICEDGKCINIAG--GVTCECPEGFMLSPNGMKCIDV  103 (245)
Q Consensus        61 ~~eC~~~~~~C~~~~C~~~~g--~~~C~C~~g~~l~~~g~~C~~~  103 (245)
                      .++|...++.|.+ .|...++  +|+|.|+.||.+..+++.|.+-
T Consensus       267 ~n~C~~~ng~Cs~-~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~  310 (318)
T 3sov_A          267 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKDG  310 (318)
T ss_dssp             CCTTTTTGGGCSS-EEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred             ccccccCCCCcce-EEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence            4678766667877 7998765  6999999999999899888654

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=91.43  E-value=0.11  Score=48.01  Aligned_cols=41  Identities=37%  Similarity=0.839  Sum_probs=35.0

Q ss_pred             eccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        60 ~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      ..++|...++.|.+ .|.+..++|.|.|+.||.+..+++.|.
T Consensus       577 ~~~~C~~~ng~C~~-~C~~~~~~~~C~C~~g~~l~~d~~~C~  617 (619)
T 3s94_A          577 GSNPCAEENGGCSH-LCLYRPQGLRCACPIGFELISDMKTCI  617 (619)
T ss_dssp             CCCGGGSGGGGCSS-EEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred             ccccCCCCCCChhH-hhccCCCCeEEECCCCCEECCCCCcCC
Confidence            35788776677987 899999999999999999998888885

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=91.32  E-value=0.099  Score=47.79  Aligned_cols=35  Identities=29%  Similarity=0.861  Sum_probs=30.2

Q ss_pred             ccccccCCCCCC-CCeEee-cCCcceecCC-CCceeCCCCCcee
Q psy11798         61 INECKENEGICE-DGKCIN-IAGGVTCECP-EGFMLSPNGMKCI  101 (245)
Q Consensus        61 ~~eC~~~~~~C~-~~~C~~-~~g~~~C~C~-~g~~l~~~g~~C~  101 (245)
                      +|+|...|  |. +|.|.+ ..++|.|.|+ +||    .|..|+
T Consensus         2 ~d~C~~~P--C~ngG~C~~~~~~~y~C~C~~~G~----~G~~Ce   39 (553)
T 1q4g_A            2 VNPCCYYP--CQHQGICVRFGLDRYQCDCTRTGY----SGPNCT   39 (553)
T ss_dssp             CCGGGGCC--CCTTCEEEEETTTEEEEECTTSSE----ETTTTC
T ss_pred             CCcCCCCC--CCCCCCcCCCCCCceEeeCCCCCc----CCCCCC
Confidence            57898877  99 469999 8999999999 999    688884

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=90.99  E-value=0.07  Score=46.98  Aligned_cols=22  Identities=45%  Similarity=1.034  Sum_probs=0.0

Q ss_pred             CCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         31 AFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        31 ~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +++|.+..   +|.|++||.    |..|+
T Consensus       376 gg~C~~~~---~C~C~~G~~----G~~Ce  397 (426)
T 3zyj_B          376 GGTCHNNV---RCLCPAAYT----GILCE  397 (426)
T ss_dssp             -----------------------------
T ss_pred             CCCcCCCC---CCcCCCCCc----CCCCc
Confidence            34454443   788888888    66664

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=90.37  E-value=0.22  Score=29.99  Aligned_cols=37  Identities=27%  Similarity=0.558  Sum_probs=25.2

Q ss_pred             cccccCCC-CCCC-CCeee--eCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLEL-SNQC-AFRCH--NVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~-p~~c-~~~C~--n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      ..++|... ...| +++|.  ...+.+.|.|++||+    |.+|+
T Consensus         8 ~~~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~----G~RCe   48 (50)
T 2rnl_A            8 KKNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYF----GERCG   48 (50)
T ss_dssp             CCCTTTTTGGGTCSSSEEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred             cCcccCchhhCcCCCCEEEEecCCCCeeEECCCCcc----ccccc
Confidence            34556431 1235 57997  445678999999999    87775

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=89.37  E-value=0.17  Score=46.46  Aligned_cols=35  Identities=34%  Similarity=0.912  Sum_probs=28.8

Q ss_pred             ccccccCCCCCC-CCeEee-cCCcceecCC-CCceeCCCCCcee
Q psy11798         61 INECKENEGICE-DGKCIN-IAGGVTCECP-EGFMLSPNGMKCI  101 (245)
Q Consensus        61 ~~eC~~~~~~C~-~~~C~~-~~g~~~C~C~-~g~~l~~~g~~C~  101 (245)
                      +|+|...|  |. +|+|++ ..++|.|.|+ +||    .|..|+
T Consensus         1 vd~C~s~P--C~ngG~C~~~~~~~y~C~C~~~G~----~G~~Ce   38 (587)
T 3nt1_A            1 ANPCCSNP--CQNRGECMSTGFDQYKCDCTRTGF----YGENCT   38 (587)
T ss_dssp             CCTTTTCC--CCTTCEEEEEETTEEEEECTTSSE----ETTTTC
T ss_pred             CCCCCCCC--CCCCCEeeCCCCCCeEEecCCCCc----cCCCCC
Confidence            47898777  98 469995 5589999999 999    688885

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=89.26  E-value=0.12  Score=32.17  Aligned_cols=20  Identities=30%  Similarity=0.708  Sum_probs=17.1

Q ss_pred             CCCCceEecCCCccCCCCCcc
Q psy11798        124 PITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       124 ~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      ..+.|.|.|++||. |.+||.
T Consensus        29 ~~~~~~C~C~~Gf~-G~~Ce~   48 (58)
T 3ltf_D           29 DLPVYSCECAIGFM-GQRCEY   48 (58)
T ss_dssp             TEEEEEEEECTTEE-SSSSCE
T ss_pred             CCCCEEeECCCCCc-cCCCcc
Confidence            44568999999999 999985

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1

Probab=89.12  E-value=0.31  Score=40.34  Aligned_cols=41  Identities=32%  Similarity=0.805  Sum_probs=31.1

Q ss_pred             cccccCCCCC---CCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLELSN---QCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~p~---~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +.++|...+.   .|...|.|..++|.|.|.+||.+..+++.|.
T Consensus       119 ~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~  162 (286)
T 1nt0_A          119 DVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCS  162 (286)
T ss_dssp             ECCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             cCCccCCCCCCcccCCCccccccCceEeecCCCceeccCCCCcc
Confidence            3456653322   4778999999999999999999998887775

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=89.00  E-value=0.14  Score=33.95  Aligned_cols=35  Identities=29%  Similarity=0.553  Sum_probs=23.0

Q ss_pred             ccccC---CCCCCCCCeee--eCCCCceEeCCCCceeCCCCCeeE
Q psy11798         20 INECL---ELSNQCAFRCH--NVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        20 ideC~---~~p~~c~~~C~--n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      .++|.   .+.+. ++.|.  ...+.+.|.|++||.    |.+|+
T Consensus        37 ~~pC~~~~~~yCl-nG~C~~i~~~~~~~C~C~~GYt----G~RCE   76 (79)
T 1xdt_R           37 RDPCLRKYKDFCI-HGECKYVKELRAPSCICHPGYH----GERCH   76 (79)
T ss_dssp             --CTTTTTTTCCS-SEEECCBGGGTBCCEEECTTEE----STTCC
T ss_pred             CCCCCccccCcCC-CCEeeeecCCCCeEEEcCCCcc----ccccc
Confidence            35565   33333 45895  334678999999999    87775

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}

Probab=88.40  E-value=0.42  Score=39.27  Aligned_cols=41  Identities=41%  Similarity=0.974  Sum_probs=31.7

Q ss_pred             cccccCCCC---CCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLELS---NQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~p---~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      ++++|....   -.|...|.|..+++.|.|.+||.+..+.+.|.
T Consensus       120 ~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~  163 (278)
T 3dem_A          120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR  163 (278)
T ss_dssp             ECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             ccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCCc
Confidence            455665322   25777899999999999999999998888775

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=88.02  E-value=0.38  Score=28.96  Aligned_cols=27  Identities=26%  Similarity=0.648  Sum_probs=21.1

Q ss_pred             CCeeeeC--CCCceEeCCCCceeCCCCCeeEec
Q psy11798         31 AFRCHNV--PGSFRCICPYGYALAPDGRHCIDI   61 (245)
Q Consensus        31 ~~~C~n~--~gsy~C~C~~Gy~~~~~g~~C~~~   61 (245)
                      +++|.-.  .+.+.|.|++||+    |.+|+..
T Consensus        18 nG~C~~~~~~~~~~C~C~~gy~----G~RCe~~   46 (50)
T 3e50_C           18 HGTCRFLVQEDKPACVCHSGYV----GARCEHA   46 (50)
T ss_pred             CCEEeeccCCCCeEEECCCCCc----ccCCCce
Confidence            4589753  4689999999999    8888643

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=87.49  E-value=0.37  Score=28.98  Aligned_cols=21  Identities=24%  Similarity=0.529  Sum_probs=17.7

Q ss_pred             CCCCCceEecCCCccCCCCCcc
Q psy11798        123 QPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       123 ~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      ...+.+.|.|++||. |.+||.
T Consensus        25 ~~~~~~~C~C~~gy~-G~RCe~   45 (50)
T 1iox_A           25 VAEQTPSCVCDEGYI-GARCER   45 (50)
T ss_dssp             TTTTEEEECCCTTEE-TTTTCE
T ss_pred             cCCCCeEEECCCCcc-cCCCCe
Confidence            455678999999999 999984

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=87.35  E-value=0.4  Score=28.82  Aligned_cols=20  Identities=25%  Similarity=0.551  Sum_probs=16.7

Q ss_pred             CCCCceEecCCCccCCCCCcc
Q psy11798        124 PITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       124 ~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      ..+.+.|.|++||. |.+|+.
T Consensus        26 ~~~~~~C~C~~gy~-G~RCe~   45 (50)
T 3e50_C           26 QEDKPACVCHSGYV-GARCEH   45 (50)
T ss_pred             CCCCeEEECCCCCc-ccCCCc
Confidence            44568999999999 999974

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=87.15  E-value=0.34  Score=29.15  Aligned_cols=26  Identities=31%  Similarity=0.724  Sum_probs=20.6

Q ss_pred             CCeee--eCCCCceEeCCCCceeCCCCCeeEe
Q psy11798         31 AFRCH--NVPGSFRCICPYGYALAPDGRHCID   60 (245)
Q Consensus        31 ~~~C~--n~~gsy~C~C~~Gy~~~~~g~~C~~   60 (245)
                      +++|.  ...+.+.|.|++||+    |.+|+.
T Consensus        18 nG~C~~~~~~~~~~C~C~~gy~----G~RCe~   45 (50)
T 1iox_A           18 KGRCRFVVAEQTPSCVCDEGYI----GARCER   45 (50)
T ss_dssp             TCCEEEETTTTEEEECCCTTEE----TTTTCE
T ss_pred             CCEEEeEcCCCCeEEECCCCcc----cCCCCe
Confidence            47886  445678999999999    888863

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=85.39  E-value=0.45  Score=47.70  Aligned_cols=39  Identities=28%  Similarity=0.529  Sum_probs=33.7

Q ss_pred             cc-cccccCCCCCCCCCeeeeCCCCceEeCC-CCceeCCCCCeeE
Q psy11798         17 CE-DINECLELSNQCAFRCHNVPGSFRCICP-YGYALAPDGRHCI   59 (245)
Q Consensus        17 C~-dideC~~~p~~c~~~C~n~~gsy~C~C~-~Gy~~~~~g~~C~   59 (245)
                      |. ..+.|..+||.++++|.....+|.|.|+ +||+    |+.|+
T Consensus      1013 C~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~----G~~C~ 1053 (1245)
T 3qcw_A         1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCN 1053 (1245)
T ss_dssp             SSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCB----STTSC
T ss_pred             eecccCceECCcCCCCCEeCCCCCCCEEECCCCCCC----CCCcc
Confidence            55 4578988898889999999999999999 6999    88885

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=84.08  E-value=0.79  Score=34.09  Aligned_cols=43  Identities=19%  Similarity=0.125  Sum_probs=32.2

Q ss_pred             CCc-eEecCCCccCCCCCcc-----CCCCCCCCCceeccCCCCCeeEeee
Q psy11798        126 TVK-ECCCSMGQAWGRYCLP-----CPSPNSGEPATFWSHYPKGFFFVLF  169 (245)
Q Consensus       126 ~~~-~C~C~~G~~~G~~C~~-----C~~~~~~~~~~~c~~~~~g~~~~~~  169 (245)
                      ..+ .|.|++||. |..|++     |..+.-..|.........|..+..|
T Consensus        28 s~~~~C~Cp~g~~-G~~Cei~~~~~C~~g~G~~YrG~~s~T~sG~~Cq~W   76 (145)
T 2i9a_A           28 SNIHWCNCPKKFG-GQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPW   76 (145)
T ss_dssp             TTCEEEECCTTEE-STTSCEESSCCEECTTCTTCCSCCCBBTTSCBCCCT
T ss_pred             cCCccccCCCCCC-CCceeccccccCCCCCccccccceecCCcCCcccCC
Confidence            445 899999999 999974     6655555777777666778877765

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=83.47  E-value=0.71  Score=27.72  Aligned_cols=21  Identities=19%  Similarity=0.445  Sum_probs=17.3

Q ss_pred             CCCCCceEecCCCccCCCCCcc
Q psy11798        123 QPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       123 ~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      ...+.+.|.|+.||. |.+|+.
T Consensus        29 ~~~~~~~C~C~~gy~-G~RCe~   49 (50)
T 2rnl_A           29 EHLEAVTCKCQQEYF-GERCGE   49 (50)
T ss_dssp             TTTTEEEEECCSSCC-SSSCCC
T ss_pred             cCCCCeeEECCCCcc-cccccc
Confidence            455678999999999 999873

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=83.43  E-value=0.42  Score=41.41  Aligned_cols=84  Identities=15%  Similarity=0.315  Sum_probs=43.5

Q ss_pred             CCCCceEeCCCCceeCCCCCeeEe-ccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccccCCCccc
Q psy11798         37 VPGSFRCICPYGYALAPDGRHCID-INECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEG  115 (245)
Q Consensus        37 ~~gsy~C~C~~Gy~~~~~g~~C~~-~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C~~~~~~~  115 (245)
                      ..+.+.|.|+++|.    |.+|+. .+.....+  +..+.+.+..+-..|.|...      +..|.....  +      .
T Consensus       268 ~~~~~~C~C~~nt~----G~~Ce~C~~gy~~~p--~~~g~~~~~~~C~~C~Cn~~------g~~C~~d~~--~------~  327 (375)
T 4aqt_A          268 EFDKLMCNCKHNTY----GVDCEKCLPFFNDRP--WRRATAESASECLPCDCNGR------SQECYFDPE--L------Y  327 (375)
T ss_dssp             TTSCEEECCCTTEE----STTSCEECTTCCSSC--CCCCCSSCCCCCCCCCGGGS------CSCEEECHH--H------H
T ss_pred             CCCCeeeeCcCCCc----CCCcccCCCCCcCCC--CCCCccCCCCCCCCCcCcCC------CCCcccccc--c------C
Confidence            44678899999999    888852 11111222  33333433333345666432      222310000  0      0


Q ss_pred             CccCCccCCCCCceEe-cCCCccCCCCCccCCC
Q psy11798        116 TCTLLRKQPITVKECC-CSMGQAWGRYCLPCPS  147 (245)
Q Consensus       116 ~C~~~~~~~~~~~~C~-C~~G~~~G~~C~~C~~  147 (245)
                      .|.      ...-.|. |..|+. |.+|+.|..
T Consensus       328 ~c~------~~~G~C~~C~~n~~-G~~Ce~C~~  353 (375)
T 4aqt_A          328 RST------GHGGHCTNCRDNTD-GAKCERCRE  353 (375)
T ss_dssp             HHS------SCCEEECSCTTTEE-STTSCEECS
T ss_pred             ccC------CCCCCCCCCCCCCc-CCCCCCCCc
Confidence            011      1124674 999998 999988754

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=83.25  E-value=0.5  Score=31.30  Aligned_cols=20  Identities=25%  Similarity=0.640  Sum_probs=16.5

Q ss_pred             CCCCceEecCCCccCCCCCcc
Q psy11798        124 PITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       124 ~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      ..+.+.|.|.+||. |.+|+.
T Consensus        58 ~~~~~~C~C~~GYt-G~RCE~   77 (79)
T 1xdt_R           58 ELRAPSCICHPGYH-GERCHG   77 (79)
T ss_dssp             GGTBCCEEECTTEE-STTCCE
T ss_pred             CCCCeEEEcCCCcc-cccccc
Confidence            34568999999999 999973

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=81.96  E-value=0.9  Score=45.51  Aligned_cols=36  Identities=28%  Similarity=0.588  Sum_probs=32.1

Q ss_pred             ccccCCCCCCCCCeeeeCCCCceEeCC-CCceeCCCCCeeE
Q psy11798         20 INECLELSNQCAFRCHNVPGSFRCICP-YGYALAPDGRHCI   59 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n~~gsy~C~C~-~Gy~~~~~g~~C~   59 (245)
                      .+.|.++||.+++.|.+..++|.|.|+ +||.    |..|+
T Consensus       619 ~~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~----G~~C~  655 (1245)
T 3qcw_A          619 AKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYL----GRSCE  655 (1245)
T ss_dssp             SCGGGSCCCCTTCEEEECSSSEEEECTTTTEE----STTSC
T ss_pred             CCCCCccCCCCCCEEeCCCCCeEEECCCCCcc----cccCc
Confidence            578999998889999999999999999 7999    77775

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=80.53  E-value=6.5  Score=26.68  Aligned_cols=59  Identities=19%  Similarity=0.490  Sum_probs=46.8

Q ss_pred             CCeeeeCC-CCceEeCCCCceeCCCCCeeEecc--ccccCCCCCC-CCeEeecC-CcceecCCCCc
Q psy11798         31 AFRCHNVP-GSFRCICPYGYALAPDGRHCIDIN--ECKENEGICE-DGKCINIA-GGVTCECPEGF   91 (245)
Q Consensus        31 ~~~C~n~~-gsy~C~C~~Gy~~~~~g~~C~~~~--eC~~~~~~C~-~~~C~~~~-g~~~C~C~~g~   91 (245)
                      .+.|.... +.-.|.|..+|...  +..|+.-+  .|....+.|. ++.|.... ..-.|.|...+
T Consensus        15 NA~Cyr~~dg~EecRCllnykk~--~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~   78 (95)
T 1b9w_A           15 NAACYRYLDGTEEWRCLLYFKED--AGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG   78 (95)
T ss_dssp             TEEEEECTTSCEEEEECTTEEEE--TTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred             CcCeEEEcCCCEEEEEECCeEec--CCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence            67898865 67799999999863  66798544  6888788898 78998887 67889998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	245
d1apja_	74	g.23.1.1 (A:) Fibrillin {Human (Homo sapiens) [Tax	1e-12
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	2e-11
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	6e-09
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	4e-11
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	4e-10
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	7e-11
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	3e-10
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	3e-10
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	1e-07
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	9e-10
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	1e-06
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	2e-09
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	9e-06
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	4e-09
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	5e-07
d1uzka3	76	g.23.1.1 (A:1529-1604) Fibrillin {Human (Homo sapi	4e-09
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	5e-09
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	2e-07
d1ksqa_	75	g.23.1.1 (A:) Transforming growth factor-beta bind	6e-09
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	2e-08
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	1e-04
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	2e-08
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	2e-07
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	2e-08
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	1e-05
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	3e-08
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	6e-06
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	4e-08
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	5e-06
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	4e-07
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	3e-04
d3bpse1	40	g.3.11.1 (E:293-332) Low density lipoprotein (LDL)	6e-07
d3bpse1	40	g.3.11.1 (E:293-332) Low density lipoprotein (LDL)	9e-05
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	2e-06
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	2e-04
d1rfnb_	57	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	3e-06
d1rfnb_	57	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	5e-04
d2bz6l1	53	g.3.11.1 (L:90-142) Coagulation factor VIIa {Human	2e-05
d2bz6l1	53	g.3.11.1 (L:90-142) Coagulation factor VIIa {Human	9e-04
d1ijqa2	50	g.3.11.1 (A:643-692) Low density lipoprotein (LDL)	1e-04
d1ijqa2	50	g.3.11.1 (A:643-692) Low density lipoprotein (LDL)	1e-04
d1haea_	63	g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Hu	0.003

>d1apja_ g.23.1.1 (A:) Fibrillin {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Fibrillin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (143), Expect = 1e-12
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 100 CIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSM-GQAWGRYCLPCPSPNSGE 152
             D+R   CY  ++ G C+  + +  + +ECCC++ G+ WG  C  CP+     
Sbjct: 2   AQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEA 55

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (133), Expect = 2e-11
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID 60
          D+NECL+ +   +  C N PGS+ C CP  + L P    C+D
Sbjct: 2  DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (115), Expect = 6e-09
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 60  DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCID 102
           D+NEC +       G C+N  G   C+CP  F L+P  + C+D
Sbjct: 2   DVNECLDPTTCIS-GNCVNTPGSYICDCPPDFELNPTRVGCVD 43

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (131), Expect = 4e-11
 Identities = 20/42 (47%), Positives = 24/42 (57%)

Query: 60  DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCI 101
           DI+EC+ +  +C  G C N  G   CECP G  LSPN   CI
Sbjct: 1   DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (124), Expect = 4e-10
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 19 DINECLELSNQCAF-RCHNVPGSFRCICPYGYALAPDGRHCI 59
          DI+EC      C    CHN  GS+RC CP G+ L+P+   CI
Sbjct: 1  DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (129), Expect = 7e-11
 Identities = 19/41 (46%), Positives = 26/41 (63%)

Query: 60  DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC 100
           DI+EC+E  G+C+ GKCIN  G   C CP G+ L+ +   C
Sbjct: 2   DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (125), Expect = 3e-10
 Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 18 EDINECLELSNQC-AFRCHNVPGSFRCICPYGYALAPDGRHC 58
          EDI+EC EL   C   +C N  GSF+C CP GY L  D R C
Sbjct: 1  EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (125), Expect = 3e-10
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 16 TCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID 60
          +  D++EC E       +C N  GS+RC CP+GY L   G  C+D
Sbjct: 1  SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVD 43

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (106), Expect = 1e-07
 Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 3/45 (6%)

Query: 58  CIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCID 102
            +D++ECKE +  C+ G+CIN  G   CECP G++L   G +C+D
Sbjct: 2   AVDMDECKEPDV-CKHGQCINTDGSYRCECPFGYIL--AGNECVD 43

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (121), Expect = 9e-10
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 20 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDI 61
          I+EC +  + C+  C N+ G ++C C  G+ L P  + C  +
Sbjct: 1  IDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV 41

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (99), Expect = 1e-06
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 61  INECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDV 103
           I+EC ++   C    C+N+ GG  C+C EGF L P+   C  V
Sbjct: 1   IDEC-QDPDTCS-QLCVNLEGGYKCQCEEGFQLDPHTKACKAV 41

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.8 bits (119), Expect = 2e-09
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 23 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
          C   +  C   C       RC C +GY L  D + C+     
Sbjct: 1  CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.8 bits (93), Expect = 9e-06
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 64  CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
           C  + G C+   C      V C C  G++L  +   C+   +  C
Sbjct: 1   CSLDNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERFPC 44

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (117), Expect = 4e-09
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 20 INECLELSNQ---CAFRCHNVPGSFRCICPYGYALAPDGRHCID 60
          I+EC     +   C   CHN  G F C C  GY L  + R C +
Sbjct: 1  IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (102), Expect = 5e-07
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 61  INECKENEGICE--DGKCINIAGGVTCECPEGFMLSPNGMKCID 102
           I+EC+   G     D  C N  GG  C C  G++L  N   C +
Sbjct: 1   IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44

>d1uzka3 g.23.1.1 (A:1529-1604) Fibrillin {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Fibrillin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 4e-09
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 6/55 (10%)

Query: 104 RQDVCYDSYQE------GTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGE 152
           R   CY   +         C+      ++   CCCS+G+AWG  C  CP+ N+ E
Sbjct: 2   RSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSE 56

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (116), Expect = 5e-09
 Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 8/48 (16%)

Query: 19 DINECLELSNQCAF--------RCHNVPGSFRCICPYGYALAPDGRHC 58
          D++EC   S              CHN  G + C C  GY L  D   C
Sbjct: 3  DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 2e-07
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 7/49 (14%)

Query: 59  IDINECKENEGICEDG-------KCINIAGGVTCECPEGFMLSPNGMKC 100
           +D++EC       E+         C N  GG  C C  G+ L  +   C
Sbjct: 2   VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>d1ksqa_ g.23.1.1 (A:) Transforming growth factor-beta binding protein-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 75

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Transforming growth factor-beta binding protein-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (118), Expect = 6e-09
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 104 RQDVCYDSYQEG-TCTLLRKQPITVKECCCSMGQAWGRYC--LPCPSPNSGE 152
            +  CY +  +   C  +    +T +ECCC+ G  WG  C   PCP   + E
Sbjct: 8   EKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAE 59

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (112), Expect = 2e-08
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 21 NECLELSN-QCAFRCHNVPGSFRCICPYGYALAPDGRHC 58
          NEC +  +  C+  C+N  G + C CP  Y L  D ++C
Sbjct: 1  NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (85), Expect = 1e-04
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 62  NECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC 100
           NEC +   +     C N  GG  C CP  + L  +   C
Sbjct: 1   NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (111), Expect = 2e-08
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 60  DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMK-CI 101
           DI+EC+ +  +C  G+C+N  G   C+C EG+      MK C+
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (105), Expect = 2e-07
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 19 DINECLELSNQCAF-RCHNVPGSFRCICPYGYAL-APDGRHCI 59
          DI+EC    + C   +C N PG F C C  GY       ++C+
Sbjct: 2  DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (112), Expect = 2e-08
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 23 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
          C   +  C   CH    S  C C  GY LA +G+ CI     
Sbjct: 3  CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPY 44

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 1e-05
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 64  CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
           C  + G C+   C      V C C  G+ L+ NG  CI      C
Sbjct: 3   CSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 46

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (111), Expect = 3e-08
 Identities = 12/42 (28%), Positives = 14/42 (33%)

Query: 23 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
          C   +  C   C    G  RC C  GY L  D   C    + 
Sbjct: 2  CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (94), Expect = 6e-06
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 64  CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
           C  + G C    C+   G   C C  G+ L  + ++C    +  C
Sbjct: 2   CSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPC 45

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.4 bits (110), Expect = 4e-08
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 3/45 (6%)

Query: 20 INECLELSN---QCAFRCHNVPGSFRCICPYGYALAPDGRHCIDI 61
          ++EC         C   CHN  G + C C  GY L  +   C  +
Sbjct: 1  VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCSAL 45

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.3 bits (94), Expect = 5e-06
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 61  INECKENEGICE--DGKCINIAGGVTCECPEGFMLSPNGMKCIDV 103
           ++EC+ + G     D  C N  GG  C C  G++L  N   C  +
Sbjct: 1   VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCSAL 45

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (102), Expect = 4e-07
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALA-PDGRHC 58
          DI+EC E    C+  CHN+PG+F CIC    ALA   G  C
Sbjct: 1  DIDEC-ENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 3e-04
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%)

Query: 60  DINECKENEGICEDGKCINIAGGVTCECPEGFMLS-PNGMKC 100
           DI+EC+     C  G C N+ G   C C     L+   G  C
Sbjct: 1   DIDECENGGF-C-SGVCHNLPGTFECICGPDSALAGQIGTDC 40

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (101), Expect = 6e-07
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 21 NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHC 58
          NECL+ +  C+  C+++   + C+CP G+ L    R C
Sbjct: 3  NECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRC 39

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 9e-05
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 62 NECKENEGICEDGKCINIAGGVTCECPEGFMLSPN 96
          NEC +N G C    C ++  G  C CP+GF L   
Sbjct: 3  NECLDNNGGCSH-VCNDLKIGYECLCPDGFQLVAQ 36

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (97), Expect = 2e-06
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)

Query: 18 EDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC 58
          +D++EC   +N C    +C N  GSF C C  GY     G  C
Sbjct: 1  QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRC 39

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 60 DINECKENEGICE-DGKCINIAGGVTCECPEGF 91
          D++EC      CE  GKCIN  G   C+C +G+
Sbjct: 2  DVDECSLGANPCEHAGKCINTLGSFECQCLQGY 34

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (97), Expect = 3e-06
 Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 1/43 (2%)

Query: 23 CLELSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINEC 64
          C   + +C   C N       C C  GY LA + + C      
Sbjct: 3  CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF 45

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 5e-04
 Identities = 13/45 (28%), Positives = 16/45 (35%)

Query: 64  CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
           C    G CE     +    V C C EG+ L+ N   C       C
Sbjct: 3   CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPC 47

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (90), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 23 CLELSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINEC 64
          C+  +  C   C +  G    C C  GY+L  DG  C    E 
Sbjct: 2  CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 9e-04
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 64  CKENEGICEDGKCINIAGG-VTCECPEGFMLSPNGMKCIDVRQDVC 108
           C    G CE   C +  G   +C C EG+ L  +G+ C    +  C
Sbjct: 2   CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC 46

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (85), Expect = 1e-04
 Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 5/45 (11%)

Query: 62  NECKENEGICE-----DGKCINIAGGVTCECPEGFMLSPNGMKCI 101
                + G C+       +    +   TC CP+G +L+ +   C+
Sbjct: 5   ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 49

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (85), Expect = 1e-04
 Identities = 13/45 (28%), Positives = 16/45 (35%), Gaps = 6/45 (13%)

Query: 21 NECLELSNQCAFRCHNVP------GSFRCICPYGYALAPDGRHCI 59
                +  C + C   P        F C CP G  LA D R C+
Sbjct: 5  ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 49

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (75), Expect = 0.003
 Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 57 HCIDINECKE----NEGICEDGKCINIAGGVTCECPEGFM 92
          H +   E ++    N G C   K ++      C+C  GF 
Sbjct: 2  HLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT 41

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	245
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.14
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.08
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.07
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.05
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	99.05
d1szba2	45	Mannose-binding protein associated serine protease	98.98
d1nt0a3	45	Mannose-binding protein associated serine protease	98.96
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.94
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.89
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.86
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.85
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.81
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.77
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.72
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.72
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.71
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.71
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.71
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.69
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.66
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.6
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.57
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.56
d1szba2	45	Mannose-binding protein associated serine protease	98.51
d1nt0a3	45	Mannose-binding protein associated serine protease	98.5
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.47
d1apja_	74	Fibrillin {Human (Homo sapiens) [TaxId: 9606]}	98.45
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.45
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	98.4
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	98.38
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.38
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	98.35
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.28
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.21
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.19
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.15
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.14
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.13
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	98.1
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.08
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	98.08
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	98.08
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.07
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.06
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	98.04
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.04
d1uzka3	76	Fibrillin {Human (Homo sapiens) [TaxId: 9606]}	98.02
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	97.98
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.97
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.86
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	97.75
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.72
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.72
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.69
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	97.68
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	97.65
d1ksqa_	75	Transforming growth factor-beta binding protein-1	97.65
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	97.56
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.47
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.44
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	97.39
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.21
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.18
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.04
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.97
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	96.93
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.87
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	96.72
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.6
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	96.44
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	95.72
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	94.93
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	94.33
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	93.56
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	93.53
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	92.81
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	92.18
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	91.34
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	91.18
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	90.85
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	88.81
d1dx5i2	35	Thrombomodulin, different EGF-like domains {Human	86.09
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	82.16
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	80.29

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.9e-11  Score=71.74  Aligned_cols=43  Identities=40%  Similarity=0.877  Sum_probs=38.4

Q ss_pred             ccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEe
Q psy11798         18 EDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID   60 (245)
Q Consensus        18 ~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~   60 (245)
                      .|||||...+..|.+.|+|++|+|.|.|++||.+.++++.|+|
T Consensus         1 TDidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1           1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD   43 (43)
T ss_dssp             CCCCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred             CCccccCCCCcCcCCEeECCCCCEEEecCCCCEECCCCCcccC
Confidence            3899998766666899999999999999999999999998875

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.3e-11  Score=72.29  Aligned_cols=42  Identities=52%  Similarity=1.004  Sum_probs=37.6

Q ss_pred             ccccccCCCCCCC-CCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         18 EDINECLELSNQC-AFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        18 ~dideC~~~p~~c-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +|||||...+..| .+.|+|++|+|.|.|++||++..+++.|+
T Consensus         1 qDinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~Ce   43 (43)
T d1uzka2           1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD   43 (43)
T ss_dssp             EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred             CCcccccCCCCCcCCCEEECCCCCeEeECCCCCeECcCCCccC
Confidence            4899999878777 68999999999999999999999988774

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.8e-11  Score=70.27  Aligned_cols=43  Identities=44%  Similarity=0.953  Sum_probs=37.2

Q ss_pred             ccccccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEe
Q psy11798         16 TCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID   60 (245)
Q Consensus        16 ~C~dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~   60 (245)
                      .|.|||||...+..+.+.|+|++|+|.|.|++||++.  ++.|+|
T Consensus         1 sCvDidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~~--g~~C~D   43 (43)
T d1emoa1           1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILA--GNECVD   43 (43)
T ss_dssp             CCCCCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEES--SSCEEE
T ss_pred             CCcceeccCCcCCCCCCEeECCCCCeEeECCCCcccC--CCcccC
Confidence            4789999998777778999999999999999999974  566764

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=2.1e-11  Score=71.03  Aligned_cols=40  Identities=45%  Similarity=0.922  Sum_probs=36.4

Q ss_pred             cccccCCCCCCC-CCeeeeCCCCceEeCCCCceeCCCCCee
Q psy11798         19 DINECLELSNQC-AFRCHNVPGSFRCICPYGYALAPDGRHC   58 (245)
Q Consensus        19 dideC~~~p~~c-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C   58 (245)
                      |||||...+..| ++.|+|++|+|+|.|++||++.++++.|
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeECcCCCcc
Confidence            799999888888 6799999999999999999998888776

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=1.1e-10  Score=67.65  Aligned_cols=41  Identities=32%  Similarity=0.945  Sum_probs=37.1

Q ss_pred             ccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEec
Q psy11798         20 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDI   61 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~   61 (245)
                      ||||.. +..|.+.|.|++|+|+|.|++||++.++++.|++|
T Consensus         1 idEC~~-~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~ai   41 (41)
T d1i0ua2           1 IDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV   41 (41)
T ss_dssp             CCTTTT-TTSCSSCEECSSSCCEECCCTTEEECTTTCCEEEC
T ss_pred             CccCCC-CCCCCCEeECCCCCEEeECCCCCeECCCCCccccC
Confidence            689974 67899999999999999999999999999999864

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=2.7e-10  Score=67.31  Aligned_cols=41  Identities=39%  Similarity=0.903  Sum_probs=36.4

Q ss_pred             ccccCCCCC---CCCCeeeeCCCCceEeCCCCceeCCCCCeeEe
Q psy11798         20 INECLELSN---QCAFRCHNVPGSFRCICPYGYALAPDGRHCID   60 (245)
Q Consensus        20 ideC~~~p~---~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~   60 (245)
                      ||||...+.   .|.+.|+|++|+|+|.|++||.+..+++.|+|
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCCCCccC
Confidence            688986654   47889999999999999999999999999986

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.96  E-value=2.6e-10  Score=67.41  Aligned_cols=42  Identities=31%  Similarity=0.801  Sum_probs=34.3

Q ss_pred             ccccCCCCC---CCCCeeeeCCCCceEeCCCCceeCCCCCeeEec
Q psy11798         20 INECLELSN---QCAFRCHNVPGSFRCICPYGYALAPDGRHCIDI   61 (245)
Q Consensus        20 ideC~~~p~---~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~   61 (245)
                      ||||...+.   .|.+.|+|++|+|+|.|++||++..+++.|+.+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~~i   45 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCSAL   45 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEECCCCCccccC
Confidence            688976543   478899999999999999999999999999753

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=3.6e-10  Score=66.09  Aligned_cols=42  Identities=36%  Similarity=0.808  Sum_probs=35.3

Q ss_pred             ccccccCCCCCCC-CCeeeeCCCCceEeCCCCceeC-CCCCeeE
Q psy11798         18 EDINECLELSNQC-AFRCHNVPGSFRCICPYGYALA-PDGRHCI   59 (245)
Q Consensus        18 ~dideC~~~p~~c-~~~C~n~~gsy~C~C~~Gy~~~-~~g~~C~   59 (245)
                      .|||||...+..| .+.|+|++|+|.|.|++||++. .+++.|+
T Consensus         1 TDidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~~~g~~Cv   44 (44)
T d1lmja1           1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM   44 (44)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEE
T ss_pred             CcccccCCCCCCCCCCEeEcCCCCeEEeCCCCCccCCCCCCcCC
Confidence            4899999887777 5699999999999999999975 4666663

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=8.1e-10  Score=67.70  Aligned_cols=41  Identities=39%  Similarity=0.891  Sum_probs=35.3

Q ss_pred             cccccCCCCCC--------CCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLELSNQ--------CAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~p~~--------c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      |||||...+..        |.+.|+|++|+|+|.|++||++..+++.|+
T Consensus         3 DidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             ecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            78999865543        356899999999999999999999999886

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5.6e-10  Score=64.84  Aligned_cols=41  Identities=46%  Similarity=1.016  Sum_probs=36.8

Q ss_pred             eccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        60 ~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      |||||...++.|.++.|+|+.|+|.|.|++||.+..+++.|
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeECcCCCcc
Confidence            68999988888987899999999999999999888777766

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=5.6e-10  Score=65.19  Aligned_cols=42  Identities=45%  Similarity=1.085  Sum_probs=37.4

Q ss_pred             EeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         59 IDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        59 ~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      +|||||...++.|.++.|+|++|+|.|.|++||.+..+++.|
T Consensus         1 qDinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~C   42 (43)
T d1uzka2           1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC   42 (43)
T ss_dssp             EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred             CCcccccCCCCCcCCCEEECCCCCeEeECCCCCeECcCCCcc
Confidence            589999987888876699999999999999999988888776

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.9e-09  Score=62.66  Aligned_cols=38  Identities=39%  Similarity=0.831  Sum_probs=32.8

Q ss_pred             ccccccC--CCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         18 EDINECL--ELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        18 ~dideC~--~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +|||||.  ++|+..+++|+|++++|+|.|++||+    |++|+
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~----G~~Ce   40 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCE   40 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSC
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCc----CCCCc
Confidence            4899998  45656699999999999999999999    88775

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.77  E-value=1.7e-09  Score=60.82  Aligned_cols=37  Identities=27%  Similarity=0.604  Sum_probs=34.2

Q ss_pred             cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      |+|+|.++|+.++++|++..++|.|.|++||+    |++|+
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   37 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFE----GRNCE   37 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEE----STTSC
T ss_pred             CcccCCCCCCCCCCEEECCCCCeEEECCCCCc----CCCCC
Confidence            68999999999999999999999999999999    87764

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=9.7e-10  Score=62.61  Aligned_cols=33  Identities=52%  Similarity=1.041  Sum_probs=29.6

Q ss_pred             cccccCCCCCCCCCeeeeCCCCceEeCCCCceeC
Q psy11798         19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALA   52 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~   52 (245)
                      |||||.. +..|.+.|+|++|+|+|.|++||++.
T Consensus         1 DidEC~~-~~~C~~~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECEN-GGFCSGVCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             ECCHHHH-CSSCSSEEEECSSSEEEEECSSSSCE
T ss_pred             CccccCC-CcCccCEeeCCCCCeEeECCCCCeeC
Confidence            6899975 47799999999999999999999975

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=5.3e-09  Score=59.45  Aligned_cols=36  Identities=42%  Similarity=0.888  Sum_probs=33.8

Q ss_pred             ccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         20 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      ||+|.++|+.++++|++..++|+|.|++||+    |++|+
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~----G~~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYE----GVHCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCc----cCcCe
Confidence            7899999998899999999999999999999    88885

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.4e-09  Score=60.34  Aligned_cols=37  Identities=27%  Similarity=0.740  Sum_probs=34.3

Q ss_pred             cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      |+|+|.++|+.++++|++..++|+|.|++||+    |++|+
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   38 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE----GKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCC----CCCCC
Confidence            68999999998899999999999999999999    88774

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=7e-09  Score=59.90  Aligned_cols=39  Identities=36%  Similarity=0.832  Sum_probs=34.2

Q ss_pred             cccCC-CCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         21 NECLE-LSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        21 deC~~-~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      |||.. ....|.+.|+|++|+|+|.|++||.|.+|++.|.
T Consensus         1 dEC~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCCCCEeecCCCCEEEeCCCCCEECCCCCeec
Confidence            67864 3357899999999999999999999999999885

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=4.2e-09  Score=60.23  Aligned_cols=39  Identities=33%  Similarity=0.933  Sum_probs=35.1

Q ss_pred             ccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         20 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +|||..++..|.+.|+|++++|.|.|++||.|. +++.|+
T Consensus         2 ~neC~~~nggC~h~C~n~~g~~~C~C~~Gy~L~-d~~tC~   40 (40)
T d3bpse1           2 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRCE   40 (40)
T ss_dssp             SCGGGTGGGGCSSEEEECSSSEEEECCTTCCEE-TTTEEC
T ss_pred             cccCCCCCCCCcCEEEcCCCCEEEECCCCCEEC-CCCcCC
Confidence            689998888999999999999999999999995 677773

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=8e-09  Score=60.20  Aligned_cols=42  Identities=38%  Similarity=0.983  Sum_probs=35.8

Q ss_pred             eccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceee
Q psy11798         60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCID  102 (245)
Q Consensus        60 ~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~  102 (245)
                      |||||+..+..| ++.|+|+.|+|.|.|++||.+..+++.|.|
T Consensus         2 DidEC~~~~~~c-~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1           2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVD   43 (43)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred             CccccCCCCcCc-CCEeECCCCCEEEecCCCCEECCCCCcccC
Confidence            789998755444 569999999999999999999988888864

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=9.8e-09  Score=59.84  Aligned_cols=41  Identities=34%  Similarity=0.898  Sum_probs=34.8

Q ss_pred             eccccccCCCCCCCCeEeecCCcceecCCCCceeC-CCCCce
Q psy11798         60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLS-PNGMKC  100 (245)
Q Consensus        60 ~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~-~~g~~C  100 (245)
                      |||||...+..|.++.|+|+.|+|.|.|++||.+. ..++.|
T Consensus         2 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~~~g~~C   43 (44)
T d1lmja1           2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC   43 (44)
T ss_dssp             CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSE
T ss_pred             cccccCCCCCCCCCCEeEcCCCCeEEeCCCCCccCCCCCCcC
Confidence            79999987777887799999999999999999875 356555

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=2.3e-08  Score=57.54  Aligned_cols=41  Identities=41%  Similarity=1.070  Sum_probs=35.8

Q ss_pred             ccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeec
Q psy11798         61 INECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDV  103 (245)
Q Consensus        61 ~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~  103 (245)
                      ||||+. ++.|.+ .|+|+.|+|.|.|++||.+.++++.|++|
T Consensus         1 idEC~~-~~~C~~-~C~n~~Gsy~C~C~~Gy~L~~d~~~C~ai   41 (41)
T d1i0ua2           1 IDECQD-PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAV   41 (41)
T ss_dssp             CCTTTT-TTSCSS-CEECSSSCCEECCCTTEEECTTTCCEEEC
T ss_pred             CccCCC-CCCCCC-EeECCCCCEEeECCCCCeECCCCCccccC
Confidence            689975 566876 89999999999999999999999999764

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=2.7e-08  Score=55.06  Aligned_cols=35  Identities=31%  Similarity=0.751  Sum_probs=32.2

Q ss_pred             cccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         21 NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        21 deC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      |+|.++|+.++++|++..++|+|.|++||+    |++|+
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~----G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFT----GHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCC----CCCcC
Confidence            689999999999999999999999999999    88774

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.7e-08  Score=58.71  Aligned_cols=43  Identities=44%  Similarity=1.046  Sum_probs=33.9

Q ss_pred             eeEeccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceee
Q psy11798         57 HCIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCID  102 (245)
Q Consensus        57 ~C~~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~  102 (245)
                      .|+|||||...+..+ ++.|+|++|+|.|.|++||.+  ++..|+|
T Consensus         1 sCvDidEC~~~~~~~-~~~C~Nt~Gsy~C~C~~Gy~~--~g~~C~D   43 (43)
T d1emoa1           1 SAVDMDECKEPDVCK-HGQCINTDGSYRCECPFGYIL--AGNECVD   43 (43)
T ss_dssp             CCCCCCSSSSTTSCS-SSCCCCCSSCCCCCCCTTEEE--SSSCEEE
T ss_pred             CCcceeccCCcCCCC-CCEeECCCCCeEeECCCCccc--CCCcccC
Confidence            378999998755433 568999999999999999987  3556643

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=5.6e-08  Score=57.07  Aligned_cols=41  Identities=37%  Similarity=0.930  Sum_probs=34.4

Q ss_pred             ccccccCCC---CCCCCeEeecCCcceecCCCCceeCCCCCceee
Q psy11798         61 INECKENEG---ICEDGKCINIAGGVTCECPEGFMLSPNGMKCID  102 (245)
Q Consensus        61 ~~eC~~~~~---~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~  102 (245)
                      ||||+..++   .|.+ .|+|+.|+|.|.|++||.+..+++.|.|
T Consensus         1 IdEC~~~~~~~~~C~~-~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCC-CCccCCCCeEEECCCCCeECCCCCCccC
Confidence            688886554   3544 8999999999999999999999999865

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.50  E-value=4.5e-08  Score=57.48  Aligned_cols=42  Identities=33%  Similarity=0.862  Sum_probs=32.1

Q ss_pred             ccccccCCCC---CCCCeEeecCCcceecCCCCceeCCCCCceeec
Q psy11798         61 INECKENEGI---CEDGKCINIAGGVTCECPEGFMLSPNGMKCIDV  103 (245)
Q Consensus        61 ~~eC~~~~~~---C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~  103 (245)
                      ||||+..++.   |.+ .|+|+.|+|.|.|++||.|..+++.|..+
T Consensus         1 IdEC~~~~~~~~~C~~-~C~Nt~gsy~C~C~~Gy~L~~d~~tC~~i   45 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDH-YCHNYLGGYYCSCRVGYILHQNKHTCSAL   45 (45)
T ss_dssp             CCTTC-------CCSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred             CcCCccCCCCcCCCCC-EeecCCCCEEEeCCCCCEECCCCCccccC
Confidence            6788765433   555 89999999999999999999999988653

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=3.7e-08  Score=55.87  Aligned_cols=35  Identities=26%  Similarity=0.724  Sum_probs=32.5

Q ss_pred             cccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         21 NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        21 deC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      |+|.++|+.++++|++..++|.|.|++||+    |++|+
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~----G~~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEE----TTTTC
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCC----cCcCe
Confidence            689999999999999999999999999999    88885

>d1apja_ g.23.1.1 (A:) Fibrillin {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Fibrillin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=8.5e-10  Score=71.89  Aligned_cols=67  Identities=25%  Similarity=0.687  Sum_probs=55.9

Q ss_pred             eeecCcccccCCCcccCccCCccCCCCCceEecC-CCccCCCCCccCCCCCCCCCceeccCCCCCeeEe
Q psy11798        100 CIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCS-MGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFV  167 (245)
Q Consensus       100 C~~~~~~~C~~~~~~~~C~~~~~~~~~~~~C~C~-~G~~~G~~C~~C~~~~~~~~~~~c~~~~~g~~~~  167 (245)
                      |+|++.+.|+..+.++.|.+.......+..|.|. .|.+||..|+.||..++.+|..+||. ..||++.
T Consensus         2 ~~D~R~~~Cy~~~~~g~C~~~l~~~~tk~~CCCs~~G~aWG~~Ce~CP~~~t~ef~~LCP~-G~Gf~~~   69 (74)
T d1apja_           2 AQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPY-GSGIIVG   69 (74)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEEEEHHHHHTTSCCSEETTTTEECCCTTSHHHHHHCSS-CSCSSCC
T ss_pred             ccccccchhhhcccCCCCCCcCCCCeEehhcCCCCCCCCcCCcccCCCCCCCHHHHHhCCC-CCCccCC
Confidence            5677777898888888898776555667899998 59999999999999999999999997 6677654

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=7.7e-08  Score=58.59  Aligned_cols=43  Identities=30%  Similarity=0.709  Sum_probs=35.0

Q ss_pred             EeccccccCCCCCC-------CCeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         59 IDINECKENEGICE-------DGKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        59 ~~~~eC~~~~~~C~-------~~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      +|||||...+..|.       ...|+|++|+|.|.|++||+|..+++.|+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            47899986655442       12799999999999999999999998885

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1.7e-07  Score=56.13  Aligned_cols=41  Identities=29%  Similarity=0.545  Sum_probs=35.9

Q ss_pred             cCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEeccc
Q psy11798         23 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINE   63 (245)
Q Consensus        23 C~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~e   63 (245)
                      |..+...|.+.|++++++|+|.|+.||+|..|+++|+++++
T Consensus         2 C~~~NGgC~~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~   42 (50)
T d1autl2           2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK   42 (50)
T ss_dssp             SSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred             CCCCCCCcccEeecCCCCeEEECCCCCEECCCCCccccCCC
Confidence            44555678999999999999999999999999999987665

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.38  E-value=9e-08  Score=57.62  Aligned_cols=42  Identities=26%  Similarity=0.668  Sum_probs=37.3

Q ss_pred             cCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEecccc
Q psy11798         23 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC   64 (245)
Q Consensus        23 C~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC   64 (245)
                      |..+...|.+.|++++++|.|.|++||.|.+|+++|++++++
T Consensus         1 C~~~NGgC~h~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~   42 (51)
T d1kigl_           1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCCCCCCcccEeEcCCCcEEeEcCCCCEECCCCCccccCCcc
Confidence            445566788999999999999999999999999999988876

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=9.6e-08  Score=55.16  Aligned_cols=38  Identities=42%  Similarity=1.073  Sum_probs=32.5

Q ss_pred             EeccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         59 IDINECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        59 ~~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      +|||||...+..|. +++|+++.++|.|.|++||    .|..|
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~----~G~~C   39 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGY----TGPRC   39 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTE----ESTTS
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCC----cCCCC
Confidence            47899986556698 6799999999999999999    57777

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.6e-07  Score=56.45  Aligned_cols=42  Identities=33%  Similarity=0.729  Sum_probs=36.2

Q ss_pred             cCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEecccc
Q psy11798         23 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC   64 (245)
Q Consensus        23 C~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~eC   64 (245)
                      |..+...|.+.|.|++++|+|.|++||+|.+|+++|++++++
T Consensus         3 C~~~NGgC~h~C~n~~g~~~C~C~~Gy~L~~D~~tC~~~~~~   44 (51)
T d2p3ua1           3 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPY   44 (51)
T ss_dssp             GGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSSS
T ss_pred             cCCCCCCcccEeecCCCCeEeEcCCCCEECCCCCccccCCcc
Confidence            444556788999999999999999999999999999976653

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.5e-07  Score=53.67  Aligned_cols=38  Identities=24%  Similarity=0.600  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeEecc
Q psy11798         21 NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDIN   62 (245)
Q Consensus        21 deC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~~~~   62 (245)
                      +.|.++|+.++++|++..++|.|.|++||.    |++|+.+.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~----G~~Ce~~~   39 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFY----GPECEYVR   39 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEE----STTSCEEC
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCcc----CCCCCCCc
Confidence            568888988899999999999999999999    98887543

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=6.8e-07  Score=51.27  Aligned_cols=39  Identities=33%  Similarity=0.787  Sum_probs=33.2

Q ss_pred             ccccc-CCCCCCCCeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         62 NECKE-NEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        62 ~eC~~-~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      |||+. ..+.|.+ .|+|+.|+|.|.|+.||.|..+++.|.
T Consensus         1 dEC~~~~~~~C~~-~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCCCC-EeecCCCCEEEeCCCCCEECCCCCeec
Confidence            57864 3456877 999999999999999999999999884

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.9e-07  Score=51.76  Aligned_cols=38  Identities=39%  Similarity=0.943  Sum_probs=33.3

Q ss_pred             ccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         61 INECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        61 ~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      +|||...++.|.+ .|+|++++|.|.|++||.|. +++.|
T Consensus         2 ~neC~~~nggC~h-~C~n~~g~~~C~C~~Gy~L~-d~~tC   39 (40)
T d3bpse1           2 TNECLDNNGGCSH-VCNDLKIGYECLCPDGFQLV-AQRRC   39 (40)
T ss_dssp             SCGGGTGGGGCSS-EEEECSSSEEEECCTTCCEE-TTTEE
T ss_pred             cccCCCCCCCCcC-EEEcCCCCEEEECCCCCEEC-CCCcC
Confidence            5899887888987 99999999999999999885 66666

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=2.6e-07  Score=52.29  Aligned_cols=35  Identities=23%  Similarity=0.574  Sum_probs=32.0

Q ss_pred             cccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         21 NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        21 deC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +.|.++|+.++++|++..++|.|.|++||+    |++|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~----G~~Ce   36 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFS----GLKCE   36 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCc----CcCcC
Confidence            568888988899999999999999999999    88886

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=2.3e-07  Score=52.56  Aligned_cols=33  Identities=36%  Similarity=0.874  Sum_probs=28.3

Q ss_pred             eccccccCCCCCCCCeEeecCCcceecCCCCceeC
Q psy11798         60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLS   94 (245)
Q Consensus        60 ~~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~   94 (245)
                      |||||+. ++.|.+ .|+|+.|+|.|.|++||.+.
T Consensus         1 DidEC~~-~~~C~~-~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECEN-GGFCSG-VCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             ECCHHHH-CSSCSS-EEEECSSSEEEEECSSSSCE
T ss_pred             CccccCC-CcCccC-EeeCCCCCeEeECCCCCeeC
Confidence            6899986 466876 99999999999999999663

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=5.4e-07  Score=53.22  Aligned_cols=36  Identities=33%  Similarity=0.632  Sum_probs=32.2

Q ss_pred             cccccCCCCCCCCCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      ..|+|.++|+.+ ++|++..++|.|.|++||+    |++|+
T Consensus         7 ~~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~----G~~Ce   42 (48)
T d1autl1           7 LEHPCASLCCGH-GTCIDGIGSFSCDCRSGWE----GRFCQ   42 (48)
T ss_dssp             SCCSSSSTTTTS-EEECCCSSCCCEEECTTEE----STTSC
T ss_pred             CCCcccCCCCCC-CEEECCCCCCeEeCCCCCc----CCCcc
Confidence            468899999876 7999999999999999999    98886

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.4e-06  Score=51.94  Aligned_cols=44  Identities=25%  Similarity=0.676  Sum_probs=37.5

Q ss_pred             cccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccc
Q psy11798         64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        64 C~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      |+...+.|.+ .|+++.++|+|.|+.||.|..+++.|.++.+.+|
T Consensus         2 C~~~NGgC~~-~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~~pC   45 (50)
T d1autl2           2 CSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPC   45 (50)
T ss_dssp             SSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEECSSSCT
T ss_pred             CCCCCCCccc-EeecCCCCeEEECCCCCEECCCCCccccCCCCCC
Confidence            4445567887 8999999999999999999999999988777555

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.08  E-value=8.5e-07  Score=49.45  Aligned_cols=35  Identities=29%  Similarity=0.799  Sum_probs=30.5

Q ss_pred             eccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         60 DINECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        60 ~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      |+|+|..+|  |. +++|++..++|.|.|++||    .|..|
T Consensus         1 D~d~C~~~P--C~ngg~C~~~~~~y~C~C~~g~----~G~~C   36 (37)
T d2c4fl1           1 DGDQCASSP--CQNGGSCKDQLQSYICFCLPAF----EGRNC   36 (37)
T ss_dssp             TCCGGGGCC--CCTTCEEEEETTEEEEECCTTE----ESTTS
T ss_pred             CcccCCCCC--CCCCCEEECCCCCeEEECCCCC----cCCCC
Confidence            578999877  98 5799999999999999999    57666

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.5e-06  Score=51.74  Aligned_cols=40  Identities=30%  Similarity=0.651  Sum_probs=33.7

Q ss_pred             ccccCCCCCCCCCeeee------CCCCceEeCCCCceeCCCCCeeE
Q psy11798         20 INECLELSNQCAFRCHN------VPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n------~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      .|||..+...|.+.|+.      ..++|+|.|+.||+|.+|++.|.
T Consensus         4 cneC~~~NGGC~h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           4 CERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             TSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             ccccCCCCCCCcCccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            36777777789999974      45799999999999999999885

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.5e-06  Score=52.08  Aligned_cols=44  Identities=32%  Similarity=0.807  Sum_probs=37.7

Q ss_pred             cccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccc
Q psy11798         64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        64 C~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      |...++.|.+ .|+++.++|.|.|+.||.|..+++.|.++.+.+|
T Consensus         3 C~~~NGgC~h-~C~n~~g~~~C~C~~Gy~L~~D~~tC~~~~~~pC   46 (51)
T d2p3ua1           3 CSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC   46 (51)
T ss_dssp             GGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSCT
T ss_pred             cCCCCCCccc-EeecCCCCeEeEcCCCCEECCCCCccccCCccCC
Confidence            4555567887 8999999999999999999999999988877555

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.07  E-value=9.4e-07  Score=50.73  Aligned_cols=36  Identities=28%  Similarity=0.656  Sum_probs=31.9

Q ss_pred             ccccCCCCCCCCCeeeeC-CCCceEeCCC-CceeCCCCCeeE
Q psy11798         20 INECLELSNQCAFRCHNV-PGSFRCICPY-GYALAPDGRHCI   59 (245)
Q Consensus        20 ideC~~~p~~c~~~C~n~-~gsy~C~C~~-Gy~~~~~g~~C~   59 (245)
                      ||+|.++|+.++++|++. .++|.|.|++ ||+    |++|+
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   39 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT   39 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcC----CcCcC
Confidence            789999999999999975 6899999986 999    88885

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.3e-06  Score=49.27  Aligned_cols=35  Identities=37%  Similarity=0.921  Sum_probs=31.1

Q ss_pred             eccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         60 DINECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        60 ~~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      |+|+|...|  |. +++|++..++|.|.|++||    .|+.|
T Consensus         2 d~d~C~~~P--C~ngg~C~~~~~~y~C~C~~g~----~G~~C   37 (39)
T d1edmb_           2 DGDQCESNP--CLNGGSCKDDINSYECWCPFGF----EGKNC   37 (39)
T ss_dssp             CCCTTTTCC--CCTTCEEEEETTEEEEECCTTC----CSTTS
T ss_pred             ccccCCCCC--CCCCcEEEcCCCCEEEECCCCC----CCCCC
Confidence            678999877  99 5799999999999999999    78877

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.04  E-value=1.8e-06  Score=51.76  Aligned_cols=44  Identities=25%  Similarity=0.755  Sum_probs=37.3

Q ss_pred             cccCCCCCCCCeEeecCCcceecCCCCceeCCCCCceeecCcccc
Q psy11798         64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        64 C~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      |...++.|.+ .|+++.++|.|.|+.||.|..+++.|.++++.+|
T Consensus         1 C~~~NGgC~h-~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~pc   44 (51)
T d1kigl_           1 CSLDNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERFPC   44 (51)
T ss_dssp             CCTTTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSSCT
T ss_pred             CCCCCCCccc-EeEcCCCcEEeEcCCCCEECCCCCccccCCccCC
Confidence            3445667887 7999999999999999999999999998887444

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.9e-06  Score=49.15  Aligned_cols=33  Identities=33%  Similarity=0.752  Sum_probs=28.7

Q ss_pred             cCCCCCCCCCeeeeCC--CCceEeCCCCceeCCCCCeeE
Q psy11798         23 CLELSNQCAFRCHNVP--GSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        23 C~~~p~~c~~~C~n~~--gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      |.++|+.++++|++..  ++|.|.|++||+    |.+|+
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g~~----G~~Ce   35 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCE   35 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCCCC----CCCcC
Confidence            5678988899999863  689999999999    99896

>d1uzka3 g.23.1.1 (A:1529-1604) Fibrillin {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Fibrillin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=5.8e-08  Score=62.93  Aligned_cols=54  Identities=30%  Similarity=0.646  Sum_probs=43.1

Q ss_pred             ccCccCCccCCCCCceEecCCCccCCCCCccCCCCCCCCCceeccCCCCCeeEee
Q psy11798        114 EGTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVL  168 (245)
Q Consensus       114 ~~~C~~~~~~~~~~~~C~C~~G~~~G~~C~~C~~~~~~~~~~~c~~~~~g~~~~~  168 (245)
                      ++.|.+.......+..|.|..|.+||..|++||..++.+|..+||. ..||+..+
T Consensus        18 ~~~C~~~l~~~~Tk~~CCCs~G~aWG~~Ce~CP~~~t~ef~~LCP~-G~Gf~p~~   71 (76)
T d1uzka3          18 DTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPG-GEGFRPNP   71 (76)
T ss_dssp             ---CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTT-CTTEEECT
T ss_pred             CCcccCcCCCccccccccCCCCCcccCcccCCCCCCCHHHHhhCcC-CCCccCCC
Confidence            3456655544456789999999999999999999999999999997 77888754

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.1e-06  Score=48.39  Aligned_cols=34  Identities=38%  Similarity=1.100  Sum_probs=30.1

Q ss_pred             ccccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         61 INECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        61 ~~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      ||+|...|  |+ +++|++..++|.|.|++||    .|..|
T Consensus         1 Id~C~~~P--C~n~g~C~~~~~~y~C~C~~G~----~G~~C   35 (39)
T d2vj3a2           1 VNECVSNP--CQNDATCLDQIGEFQCICMPGY----EGVHC   35 (39)
T ss_dssp             CCTTTTCC--CCSSCEEEECSSCEEEECCTTE----ESSSS
T ss_pred             CcCCcCCC--CCCCCEEECCCCCEEEeCCCCC----ccCcC
Confidence            68898877  99 5699999999999999999    68777

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=3.8e-06  Score=51.36  Aligned_cols=42  Identities=26%  Similarity=0.568  Sum_probs=35.3

Q ss_pred             cCCCCCCCCCeeeeCCC-CceEeCCCCceeCCCCCeeEecccc
Q psy11798         23 CLELSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINEC   64 (245)
Q Consensus        23 C~~~p~~c~~~C~n~~g-sy~C~C~~Gy~~~~~g~~C~~~~eC   64 (245)
                      |..+...|.+.|+++++ +|.|.|++||+|.+|++.|+.+++.
T Consensus         3 C~~~NGgC~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~f   45 (57)
T d1rfnb_           3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF   45 (57)
T ss_dssp             TTGGGGGCSSEEEECTTSCEEEECCTTEEECTTSSSEEECSSS
T ss_pred             cCCCCCCcccEeeeCCCCCeEeECCCCCEECCCCCccccCCCc
Confidence            44455678999999975 8999999999999999999977653

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.86  E-value=4.1e-06  Score=47.72  Aligned_cols=35  Identities=26%  Similarity=0.629  Sum_probs=30.6

Q ss_pred             cccCCCCCCCCCeeeeC-CCCceEeCC-CCceeCCCCCeeE
Q psy11798         21 NECLELSNQCAFRCHNV-PGSFRCICP-YGYALAPDGRHCI   59 (245)
Q Consensus        21 deC~~~p~~c~~~C~n~-~gsy~C~C~-~Gy~~~~~g~~C~   59 (245)
                      |+|.++|+.++++|++. .++|+|.|+ +||+    |+.|+
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~----G~~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcC----CcCcC
Confidence            68999999999999985 688999997 6999    88885

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=9e-06  Score=44.54  Aligned_cols=33  Identities=39%  Similarity=1.149  Sum_probs=28.1

Q ss_pred             cccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCce
Q psy11798         62 NECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKC  100 (245)
Q Consensus        62 ~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C  100 (245)
                      |+|...|  |. +|+|++..++|.|.|++||    .|+.|
T Consensus         1 d~C~~~P--C~ngg~C~~~~~~y~C~C~~g~----~G~~C   34 (35)
T d2vj3a3           1 DECASSP--CLHNGRCLDKINEFQCECPTGF----TGHLC   34 (35)
T ss_dssp             CTTTTCC--STTTCEEEECSSCEEEECCTTE----ESSSS
T ss_pred             CCCCCCC--CCCCcEEECCCCCeEEECCCCC----CCCCc
Confidence            5787766  99 5799999999999999999    57666

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=2.5e-05  Score=47.62  Aligned_cols=44  Identities=36%  Similarity=0.747  Sum_probs=36.9

Q ss_pred             cccCCCCCCCCeEeecCC-cceecCCCCceeCCCCCceeecCcccc
Q psy11798         64 CKENEGICEDGKCINIAG-GVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        64 C~~~~~~C~~~~C~~~~g-~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      |...++.|.+ .|+++.+ +|.|.|+.||.|..+++.|.++.+.+|
T Consensus         3 C~~~NGgC~h-~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~fpC   47 (57)
T d1rfnb_           3 CNIKNGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPC   47 (57)
T ss_dssp             TTGGGGGCSS-EEEECTTSCEEEECCTTEEECTTSSSEEECSSSCT
T ss_pred             cCCCCCCccc-EeeeCCCCCeEeECCCCCEECCCCCccccCCCcCC
Confidence            5555677887 8999864 899999999999999999988877666

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=6.8e-06  Score=51.48  Aligned_cols=37  Identities=22%  Similarity=0.478  Sum_probs=32.0

Q ss_pred             cccccCCCCCCCCCeee-----eCCCCceEeCCCCceeCCCCCeeE
Q psy11798         19 DINECLELSNQCAFRCH-----NVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        19 dideC~~~p~~c~~~C~-----n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +.++|.++|+.++++|.     +..++|.|.|++||+    |++|+
T Consensus         5 ~c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~----G~~Ce   46 (63)
T d1haea_           5 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT   46 (63)
T ss_dssp             ECCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred             cCCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCC----CCCcC
Confidence            45788899999999995     456789999999999    99997

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.69  E-value=5e-06  Score=46.96  Aligned_cols=27  Identities=30%  Similarity=0.805  Sum_probs=23.4

Q ss_pred             CCeeeeCCCCceEeCCCCceeCCCCCeeE
Q psy11798         31 AFRCHNVPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        31 ~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      .+.|+|++|+|.|.|++||..  +|+.|.
T Consensus        12 ~A~C~Nt~Gsy~C~C~~Gy~G--dG~~C~   38 (40)
T d1gl4a2          12 HAECRDYATGFCCRCVANYTG--NGRQCV   38 (40)
T ss_dssp             TEEEEECSSCEEEEECTTEEE--CSSSEE
T ss_pred             CCEeecCCCCeEeECCCCCcC--CCCEee
Confidence            578999999999999999984  377775

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=9.9e-06  Score=45.47  Aligned_cols=34  Identities=41%  Similarity=1.052  Sum_probs=29.3

Q ss_pred             cccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         62 NECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        62 ~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      |+|...|  |+ +|+|++..++|.|.|++||    .|..|+
T Consensus         1 D~C~~~P--C~ngg~C~~~~~~y~C~C~~G~----~G~~Ce   35 (39)
T d1xkba1           1 DQCETSP--CQNQGKCKDGLGEYTCTCLEGF----EGKNCE   35 (39)
T ss_dssp             CTTTTCC--CCSSCEECCCSSSCCEECCTTE----ETTTTC
T ss_pred             CcCCCCC--CCCCcEEECCCCCEEEECCCCC----CcCcCe
Confidence            5788766  99 5799999999999999999    688873

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.9e-05  Score=47.36  Aligned_cols=40  Identities=30%  Similarity=0.713  Sum_probs=33.0

Q ss_pred             cCCCCCCCCCeeeeCCC-CceEeCCCCceeCCCCCeeEecc
Q psy11798         23 CLELSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDIN   62 (245)
Q Consensus        23 C~~~p~~c~~~C~n~~g-sy~C~C~~Gy~~~~~g~~C~~~~   62 (245)
                      |..+...|.+.|+++++ +|.|.|+.||++.+|+++|+...
T Consensus         2 C~~~NGGC~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~   42 (53)
T d2bz6l1           2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTV   42 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECS
T ss_pred             CCCCCCCCcCEeeeCCCCCEEeECCCCCEECCCCCcccCCC
Confidence            44445678899999986 58999999999999999998543

>d1ksqa_ g.23.1.1 (A:) Transforming growth factor-beta binding protein-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Transforming growth factor-beta binding protein-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=4.9e-07  Score=58.46  Aligned_cols=59  Identities=32%  Similarity=0.803  Sum_probs=47.8

Q ss_pred             cccCCCccc-CccCCccCCCCCceEecCCCccCCCCCc--cCCCCCCCCCceeccCCCCCeeE
Q psy11798        107 VCYDSYQEG-TCTLLRKQPITVKECCCSMGQAWGRYCL--PCPSPNSGEPATFWSHYPKGFFF  166 (245)
Q Consensus       107 ~C~~~~~~~-~C~~~~~~~~~~~~C~C~~G~~~G~~C~--~C~~~~~~~~~~~c~~~~~g~~~  166 (245)
                      .|+..+..+ .|.+.....+.+..|.|..|.+||..|+  +||..++.+|..+||. ..||+.
T Consensus        11 ~Cy~~~~~g~~C~~pl~~~~Tk~~CCCs~G~aWG~~Cel~~CP~~~s~ef~~LCp~-G~G~~~   72 (75)
T d1ksqa_          11 ECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMCPK-GKGFVP   72 (75)
T ss_dssp             EEESSBCTTTTCBCSSCCEEEHHHHHHTCCSEEEETTEEEECCCSSSHHHHHHCSS-CSCCSS
T ss_pred             hHHHHccCCCccCCcCCccceeccccCCCCCccCCCCccCcCcCCCcHHHHHhCcC-CCCcCc
Confidence            377776544 5887765556778999999999999998  4999999999999997 567654

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=2.7e-05  Score=46.14  Aligned_cols=39  Identities=26%  Similarity=0.704  Sum_probs=32.4

Q ss_pred             cccccCCCCCCCCeEe------ecCCcceecCCCCceeCCCCCcee
Q psy11798         62 NECKENEGICEDGKCI------NIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        62 ~eC~~~~~~C~~~~C~------~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      +||....+.|.+ .|+      ++.++|.|.|+.||.|..+++.|.
T Consensus         5 neC~~~NGGC~h-~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           5 ERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             SSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             cccCCCCCCCcC-ccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            567776778987 896      455799999999999999999884

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=1.9e-05  Score=46.36  Aligned_cols=35  Identities=31%  Similarity=0.851  Sum_probs=30.6

Q ss_pred             ccccccCCCCCCCCeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         61 INECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        61 ~~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      .++|..+|  |.+|+|++..++|.|.|++||    .|+.|+
T Consensus         8 ~~~C~~~P--C~nG~C~~~~~~y~C~C~~G~----~G~~Ce   42 (48)
T d1autl1           8 EHPCASLC--CGHGTCIDGIGSFSCDCRSGW----EGRFCQ   42 (48)
T ss_dssp             CCSSSSTT--TTSEEECCCSSCCCEEECTTE----ESTTSC
T ss_pred             CCcccCCC--CCCCEEECCCCCCeEeCCCCC----cCCCcc
Confidence            56788767  998899999999999999999    688883

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=1.9e-05  Score=44.53  Aligned_cols=36  Identities=36%  Similarity=0.951  Sum_probs=29.5

Q ss_pred             cccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCceeec
Q psy11798         62 NECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCIDV  103 (245)
Q Consensus        62 ~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~~~  103 (245)
                      +.|..+|  |. +|+|++..++|.|.|++||    .|..|+.+
T Consensus         2 ~~C~~~p--C~ngg~C~~~~~~y~C~C~~g~----~G~~Ce~~   38 (40)
T d1g1sa2           2 ASCQDMS--CSKQGECLETIGNYTCSCYPGF----YGPECEYV   38 (40)
T ss_dssp             CCCCTTG--GGGSEEEEECSSSEEEEECTTE----ESTTSCEE
T ss_pred             CcccCCc--CCCCcEEECCCCCeEEeCCCCc----cCCCCCCC
Confidence            3566655  88 6799999999999999999    78888654

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=7.2e-05  Score=44.78  Aligned_cols=44  Identities=32%  Similarity=0.829  Sum_probs=35.1

Q ss_pred             cccCCCCCCCCeEeecCC-cceecCCCCceeCCCCCceeecCcccc
Q psy11798         64 CKENEGICEDGKCINIAG-GVTCECPEGFMLSPNGMKCIDVRQDVC  108 (245)
Q Consensus        64 C~~~~~~C~~~~C~~~~g-~~~C~C~~g~~l~~~g~~C~~~~~~~C  108 (245)
                      |..+++.|.+ .|+++.+ +|.|.|+.||.|..+++.|....+.+|
T Consensus         2 C~~~NGGC~h-~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~fpC   46 (53)
T d2bz6l1           2 CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC   46 (53)
T ss_dssp             TTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCT
T ss_pred             CCCCCCCCcC-EeeeCCCCCEEeECCCCCEECCCCCcccCCCccCC
Confidence            4444567887 8999876 689999999999999999977655445

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=4e-05  Score=42.90  Aligned_cols=34  Identities=35%  Similarity=1.058  Sum_probs=28.3

Q ss_pred             cccccCCCCCC-CCeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         62 NECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        62 ~eC~~~~~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      +.|...|  |. +|+|++..++|.|.|++||    .|..|+
T Consensus         2 ~~C~~~p--C~ngg~C~~~~~~~~C~C~~g~----~G~~Ce   36 (39)
T d1g1ta2           2 AACTNTS--CSGHGECVETINNYTCKCDPGF----SGLKCE   36 (39)
T ss_dssp             CCCCTTG--GGGSEEEEEETTEEEEEECTTE----ESTTSC
T ss_pred             CcccCCc--CCCCcEEECCCCCEEEeCCCCC----cCcCcC
Confidence            4566655  98 5799999999999999999    688874

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.18  E-value=5.2e-05  Score=42.59  Aligned_cols=31  Identities=29%  Similarity=0.812  Sum_probs=25.4

Q ss_pred             CCCC-CCeEeecCCcceecCCCCceeCCCCCcee
Q psy11798         69 GICE-DGKCINIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        69 ~~C~-~~~C~~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      +.|. ++.|+|++|+|.|.|++||..  +|..|.
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~G--dG~~C~   38 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYTG--NGRQCV   38 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEE--CSSSEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCcC--CCCEee
Confidence            4466 679999999999999999964  576664

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00026  Score=37.72  Aligned_cols=31  Identities=39%  Similarity=0.844  Sum_probs=25.3

Q ss_pred             cccCCCCCCC-CCeeeeCCCCceEeCCCCceeC
Q psy11798         21 NECLELSNQC-AFRCHNVPGSFRCICPYGYALA   52 (245)
Q Consensus        21 deC~~~p~~c-~~~C~n~~gsy~C~C~~Gy~~~   52 (245)
                      |||.-. ..| .++|.|.+|+|.|.|..||+..
T Consensus         2 dECsig-npCGnGTCtNviGgFec~C~~GFepg   33 (39)
T d1emoa2           2 DECSVG-NPCGNGTCKNVIGGFECTCEEGFEPG   33 (39)
T ss_dssp             CGGGTT-CSSSSSCEEECSSSEEECCSSSSCCC
T ss_pred             CccccC-CccCCceeeecccceEEeecCCcCCC
Confidence            677643 346 7899999999999999999843

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.97  E-value=0.00029  Score=42.04  Aligned_cols=35  Identities=23%  Similarity=0.505  Sum_probs=28.6

Q ss_pred             cccCCCCCCCCCeeeeC--CCCceEeCCCCceeCCCCCeeE
Q psy11798         21 NECLELSNQCAFRCHNV--PGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        21 deC~~~p~~c~~~C~n~--~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      ++|.++++.++++|+..  ...|+|.|++||+    |.+|+
T Consensus         7 ~~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~----G~~Ce   43 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ   43 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred             CCCCCCCCCCCcEeeccCCCCCeEeECCCCCc----CCCCc
Confidence            45667777778999854  4689999999999    88887

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=96.93  E-value=0.00026  Score=40.10  Aligned_cols=35  Identities=29%  Similarity=0.918  Sum_probs=28.6

Q ss_pred             ccccccCCCCCC-CCeEeec-CCcceecCCC-CceeCCCCCcee
Q psy11798         61 INECKENEGICE-DGKCINI-AGGVTCECPE-GFMLSPNGMKCI  101 (245)
Q Consensus        61 ~~eC~~~~~~C~-~~~C~~~-~g~~~C~C~~-g~~l~~~g~~C~  101 (245)
                      +|+|..+|  |+ +|+|++. .++|.|.|++ ||    .|..|+
T Consensus         2 id~C~~nP--C~ngG~C~~~~~~~y~C~C~~~G~----~G~~Ce   39 (42)
T d1q4ga2           2 VNPCCYYP--CQHQGICVRFGLDRYQCDCTRTGY----SGPNCT   39 (42)
T ss_dssp             CCGGGGCC--CCTTCEEEEETTTEEEEECTTSSE----ETTTTC
T ss_pred             CccCcCCC--CCCCCEeeeCCCCCEEEECCCCCc----CCcCcC
Confidence            67898877  99 5799875 6889999986 89    688774

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00027  Score=41.31  Aligned_cols=36  Identities=19%  Similarity=0.356  Sum_probs=28.9

Q ss_pred             cccCCCCCCCCCeeeeC--CCCceEeCCCCceeCCCCCeeEe
Q psy11798         21 NECLELSNQCAFRCHNV--PGSFRCICPYGYALAPDGRHCID   60 (245)
Q Consensus        21 deC~~~p~~c~~~C~n~--~gsy~C~C~~Gy~~~~~g~~C~~   60 (245)
                      ++|..+++.++++|+..  ..+|.|.|++||+    |.+|+-
T Consensus         5 ~~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~----G~~Ce~   42 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYI----GERCQY   42 (48)
T ss_dssp             CSTTCCEECTTCEEEEETTTTEEEEEECTTEE----STTSCE
T ss_pred             CCCCCCCCCCCcEEeeeCCCCCeEEeCCCCcc----cCCCCc
Confidence            55667777778999864  4689999999999    888863

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00067  Score=38.11  Aligned_cols=30  Identities=27%  Similarity=0.366  Sum_probs=22.6

Q ss_pred             ccCccCCc--c--CCCCCceEecCCCccCCCCCcc
Q psy11798        114 EGTCTLLR--K--QPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       114 ~~~C~~~~--~--~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      +++|++++  .  ...+.|.|.|++||. |.+|+.
T Consensus         3 ~nPC~ngG~C~~~~~~~~y~C~C~~g~~-G~~Ce~   36 (41)
T d1tpga1           3 EPRCFNGGTCQQALYFSDFVCQCPEGFA-GKSCEI   36 (41)
T ss_dssp             SCCSCTTCEEEEESSSSCEEEECCTTCB-SSSCCB
T ss_pred             CCCCCCCCEEecCCCCCCeEECCCCCCC-CCCcCc
Confidence            45666665  2  345679999999999 999985

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00094  Score=35.51  Aligned_cols=30  Identities=43%  Similarity=1.105  Sum_probs=25.7

Q ss_pred             cccccCCCCCCCCeEeecCCcceecCCCCce
Q psy11798         62 NECKENEGICEDGKCINIAGGVTCECPEGFM   92 (245)
Q Consensus        62 ~eC~~~~~~C~~~~C~~~~g~~~C~C~~g~~   92 (245)
                      |||+.. +.|.+++|.|.+|.|.|.|..||.
T Consensus         2 dECsig-npCGnGTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           2 DECSVG-NPCGNGTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CGGGTT-CSSSSSCEEECSSSEEECCSSSSC
T ss_pred             CccccC-CccCCceeeecccceEEeecCCcC
Confidence            678753 459989999999999999999994

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.44  E-value=0.0009  Score=37.57  Aligned_cols=34  Identities=35%  Similarity=0.984  Sum_probs=27.0

Q ss_pred             cccccCCCCCC-CCeEeec-CCcceecCC-CCceeCCCCCcee
Q psy11798         62 NECKENEGICE-DGKCINI-AGGVTCECP-EGFMLSPNGMKCI  101 (245)
Q Consensus        62 ~eC~~~~~~C~-~~~C~~~-~g~~~C~C~-~g~~l~~~g~~C~  101 (245)
                      |+|..+|  |+ +|+|++. .++|.|.|+ +||    .|..|+
T Consensus         2 d~C~~~P--C~ngG~C~~~~~~~y~C~C~~~gy----~G~~Ce   38 (41)
T d1cvua2           2 NPCCSNP--CQNRGECMSTGFDQYKCDCTRTGF----YGENCT   38 (41)
T ss_dssp             CTTTTCC--CCTTCEEEEEETTEEEEECTTSSE----ETTTTC
T ss_pred             CcCcCCC--CCCCCEEEECCCCCEEEeCcCCCc----CCcCcC
Confidence            5787766  99 5799875 688999997 599    688774

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.0021  Score=39.56  Aligned_cols=37  Identities=27%  Similarity=0.780  Sum_probs=29.3

Q ss_pred             EeccccccCCCCCCC-CeEe-----ecCCcceecCCCCceeCCCCCcee
Q psy11798         59 IDINECKENEGICED-GKCI-----NIAGGVTCECPEGFMLSPNGMKCI  101 (245)
Q Consensus        59 ~~~~eC~~~~~~C~~-~~C~-----~~~g~~~C~C~~g~~l~~~g~~C~  101 (245)
                      ++.++|...+  |.+ |.|.     +..++|.|.|++||    .|..|+
T Consensus         4 ~~c~ec~~~~--C~NgG~C~~~~~~~~~~~y~C~C~~gy----~G~~Ce   46 (63)
T d1haea_           4 VKCAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCQPGF----TGARCT   46 (63)
T ss_dssp             EECCHHHHTT--SCTTCEEEEEESSSSSCCEEEECCTTE----ESTTSC
T ss_pred             ccCCCCcCCc--CCCCCEEeecccccCCCCEEeECCCCC----CCCCcC
Confidence            4567888766  984 7995     45678999999999    788885

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.93  E-value=0.011  Score=34.81  Aligned_cols=29  Identities=24%  Similarity=0.567  Sum_probs=21.7

Q ss_pred             cCccCCc----cCCCCCceEecCCCccCCCCCcc
Q psy11798        115 GTCTLLR----KQPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       115 ~~C~~~~----~~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      +.|.+++    ......|.|.|++||. |.+||.
T Consensus        12 ~~C~NgG~C~~~~~~~~~~C~C~~gy~-G~~Ce~   44 (53)
T d3egfa_          12 GYCLNGGVCMHIESLDSYTCNCVIGYS-GDRCQT   44 (53)
T ss_dssp             CCSCSSCEEEEESSSSCEEEECCTTCC-SSSSCC
T ss_pred             CCCCCCcEeeccCCCCCeEeECCCCCc-CCCCcc
Confidence            4566544    2445679999999999 999985

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.33  E-value=0.012  Score=33.85  Aligned_cols=29  Identities=24%  Similarity=0.516  Sum_probs=21.3

Q ss_pred             cCccCCc----cCCCCCceEecCCCccCCCCCcc
Q psy11798        115 GTCTLLR----KQPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       115 ~~C~~~~----~~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      +.|.+++    ......|.|.|+.||. |.+|+.
T Consensus        10 ~~C~ngG~C~~~~~~~~~~C~C~~gy~-G~~Ce~   42 (48)
T d1nqlb_          10 GYCLHDGVCMYIEALDKYACNCVVGYI-GERCQY   42 (48)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEE-STTSCE
T ss_pred             CCCCCCcEEeeeCCCCCeEEeCCCCcc-cCCCCc
Confidence            4455544    2344579999999999 999975

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.051  Score=29.52  Aligned_cols=34  Identities=26%  Similarity=0.935  Sum_probs=26.2

Q ss_pred             cccccCCCCCCCCCeeeeCC-CCceEeCCCCceeCCC
Q psy11798         19 DINECLELSNQCAFRCHNVP-GSFRCICPYGYALAPD   54 (245)
Q Consensus        19 dideC~~~p~~c~~~C~n~~-gsy~C~C~~Gy~~~~~   54 (245)
                      .+|+|...+  |...|.... +.|+|.|..||...++
T Consensus         3 ~vDPCf~~~--CE~qCqP~~~~~Y~CiCaeGFaP~p~   37 (43)
T d1dx5i1           3 PVDPCFRAN--CEYQCQPLDQTSYLCVCAEGFAPIPH   37 (43)
T ss_dssp             CCCGGGGCC--CSSEEEECSSSCEEEECCTTEEEETT
T ss_pred             ccccccCCC--cceeeeeCCCCcceEEeccccccCCC
Confidence            467777654  778898764 6899999999986654

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.53  E-value=0.024  Score=32.82  Aligned_cols=34  Identities=18%  Similarity=0.338  Sum_probs=24.4

Q ss_pred             CCCCCCCCeee-eCCCCceEeCCCCceeCCCCCeeEecc
Q psy11798         25 ELSNQCAFRCH-NVPGSFRCICPYGYALAPDGRHCIDIN   62 (245)
Q Consensus        25 ~~p~~c~~~C~-n~~gsy~C~C~~Gy~~~~~g~~C~~~~   62 (245)
                      .+.+.+++.|. ...+.+.|.|+.||.    |.+|+-.+
T Consensus        13 ~~yC~nGgcc~~~~~~~~~C~C~~gy~----G~rCe~~~   47 (50)
T d1ioxa_          13 KHYCIKGRCRFVVAEQTPSCVCDEGYI----GARCERVD   47 (50)
T ss_dssp             TTSCTTCCEEEETTTTEEEECCCTTEE----TTTTCEEC
T ss_pred             CCCccCCeEEEeCCCCCcEeECCCCCe----eCCCccce
Confidence            34555577774 445679999999999    88887443

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.027  Score=32.01  Aligned_cols=29  Identities=24%  Similarity=0.517  Sum_probs=21.4

Q ss_pred             cCccCCc---cCCCCCceEecCCCccCCCCCcc
Q psy11798        115 GTCTLLR---KQPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       115 ~~C~~~~---~~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      +.|.|+.   ......+.|.|+.||. |.+|+.
T Consensus        12 ~yC~nG~C~~~~~~~~~~C~C~~gY~-G~RCe~   43 (46)
T d1k36a_          12 GYCLHGQCIYLVDMSQNYCRCEVGYT-GVRCEH   43 (46)
T ss_dssp             SSCSSEEEEEETTTTEEEEEECTTCS-STTSCC
T ss_pred             CcCcCCEEEEeCCCCccEeECCCCce-ecCcee
Confidence            4455543   3455679999999999 999974

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.18  E-value=0.029  Score=31.86  Aligned_cols=29  Identities=24%  Similarity=0.370  Sum_probs=21.5

Q ss_pred             CCCCCCCeeee--CCCCceEeCCCCceeCCCCCeeE
Q psy11798         26 LSNQCAFRCHN--VPGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        26 ~p~~c~~~C~n--~~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      +++. ++.|.-  ....+.|.|++||.    |.+|+
T Consensus        12 ~yC~-nG~C~~~~~~~~~~C~C~~gY~----G~RCe   42 (46)
T d1k36a_          12 GYCL-HGQCIYLVDMSQNYCRCEVGYT----GVRCE   42 (46)
T ss_dssp             SSCS-SEEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred             CcCc-CCEEEEeCCCCccEeECCCCce----ecCce
Confidence            3444 477864  45689999999999    87776

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.34  E-value=0.063  Score=30.81  Aligned_cols=21  Identities=24%  Similarity=0.501  Sum_probs=17.5

Q ss_pred             CCCCCceEecCCCccCCCCCcc
Q psy11798        123 QPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       123 ~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      .....+.|.|+.||. |.+||.
T Consensus        24 ~~~~~~~C~C~~gy~-G~RCe~   44 (49)
T d1moxc_          24 VQEDKPACVCHSGYV-GARCEH   44 (49)
T ss_dssp             TTTTEEEEEECTTEE-STTSCE
T ss_pred             CCCCCcEeECCCCCE-ecCCcc
Confidence            455578999999999 999974

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.18  E-value=0.063  Score=30.97  Aligned_cols=28  Identities=25%  Similarity=0.463  Sum_probs=21.1

Q ss_pred             CccCCc---cCCCCCceEecCCCccCCCCCcc
Q psy11798        116 TCTLLR---KQPITVKECCCSMGQAWGRYCLP  144 (245)
Q Consensus       116 ~C~~~~---~~~~~~~~C~C~~G~~~G~~C~~  144 (245)
                      .|.++.   ......+.|.|+.||. |.+||.
T Consensus        15 yC~nGgcc~~~~~~~~~C~C~~gy~-G~rCe~   45 (50)
T d1ioxa_          15 YCIKGRCRFVVAEQTPSCVCDEGYI-GARCER   45 (50)
T ss_dssp             SCTTCCEEEETTTTEEEECCCTTEE-TTTTCE
T ss_pred             CccCCeEEEeCCCCCcEeECCCCCe-eCCCcc
Confidence            455544   4556678999999999 999974

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.85  E-value=0.057  Score=31.02  Aligned_cols=32  Identities=19%  Similarity=0.332  Sum_probs=22.2

Q ss_pred             CCCCCCeee-eCCCCceEeCCCCceeCCCCCeeEecc
Q psy11798         27 SNQCAFRCH-NVPGSFRCICPYGYALAPDGRHCIDIN   62 (245)
Q Consensus        27 p~~c~~~C~-n~~gsy~C~C~~Gy~~~~~g~~C~~~~   62 (245)
                      .+.+++.|. .....+.|.|++||.    |.+|+.++
T Consensus        14 yClnGgcc~~~~~~~~~C~C~~gy~----G~RCe~~~   46 (49)
T d1moxc_          14 FCFHGTCRFLVQEDKPACVCHSGYV----GARCEHAD   46 (49)
T ss_dssp             SSTTEEEEEETTTTEEEEEECTTEE----STTSCEEC
T ss_pred             EeeCCeEEecCCCCCcEeECCCCCE----ecCCcccc
Confidence            344455553 334678999999999    88887543

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.81  E-value=0.25  Score=26.05  Aligned_cols=27  Identities=26%  Similarity=0.621  Sum_probs=21.2

Q ss_pred             CCCCeeeeC---CCCceEeCCCCceeCCCCCeeE
Q psy11798         29 QCAFRCHNV---PGSFRCICPYGYALAPDGRHCI   59 (245)
Q Consensus        29 ~c~~~C~n~---~gsy~C~C~~Gy~~~~~g~~C~   59 (245)
                      .++++|+.-   .+-.+|.||.+|.    |.+|+
T Consensus         5 lNGG~Cvsyk~FS~I~rC~CPk~f~----G~HCE   34 (40)
T d2i9aa1           5 LNGGTCVSNKYFSNIHWCNCPKKFG----GQHCE   34 (40)
T ss_dssp             CTTCEEEECSSSTTCEEEECCTTEE----STTSC
T ss_pred             ccCCEEEEEehhcCCEEecCCcccC----ceeEE
Confidence            458889864   2456899999999    88885

>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.09  E-value=0.11  Score=26.65  Aligned_cols=16  Identities=25%  Similarity=0.370  Sum_probs=12.1

Q ss_pred             CccccCCCCee-CCCcc
Q psy11798          2 STTMSVTGYRL-RVETC   17 (245)
Q Consensus         2 ~~C~C~~G~~~-~g~~C   17 (245)
                      +.|.|++||.+ +|..|
T Consensus        18 ~~C~CPeGyIldeg~~c   34 (35)
T d1dx5i2          18 ASCECPEGYILDDGFIC   34 (35)
T ss_dssp             TCEECCTTEEEETTTEE
T ss_pred             CcccCCCceEecccccc
Confidence            47899999988 56555

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.16  E-value=0.34  Score=26.13  Aligned_cols=23  Identities=26%  Similarity=0.420  Sum_probs=16.5

Q ss_pred             cCccCCc-cCCCCCceEecCCCcc
Q psy11798        115 GTCTLLR-KQPITVKECCCSMGQA  137 (245)
Q Consensus       115 ~~C~~~~-~~~~~~~~C~C~~G~~  137 (245)
                      ..|...+ .-..+.|+|.|.+||.
T Consensus        10 ~~CE~qCqP~~~~~Y~CiCaeGFa   33 (43)
T d1dx5i1          10 ANCEYQCQPLDQTSYLCVCAEGFA   33 (43)
T ss_dssp             CCCSSEEEECSSSCEEEECCTTEE
T ss_pred             CCcceeeeeCCCCcceEEeccccc
Confidence            3455555 4556789999999996

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.29  E-value=0.34  Score=26.44  Aligned_cols=28  Identities=32%  Similarity=0.706  Sum_probs=21.1

Q ss_pred             CC-CCeeee--CCCCceEeCCCCceeCCCCCeeEe
Q psy11798         29 QC-AFRCHN--VPGSFRCICPYGYALAPDGRHCID   60 (245)
Q Consensus        29 ~c-~~~C~n--~~gsy~C~C~~Gy~~~~~g~~C~~   60 (245)
                      .| ++.|.-  ....+.|.|..||.    |.+|+.
T Consensus         9 yCihG~C~~i~~l~~~~C~C~~gY~----G~RCq~   39 (41)
T d1xdtr_           9 FCIHGECKYVKELRAPSCICHPGYH----GERCHG   39 (41)
T ss_dssp             CCSSEEECCBGGGTBCCEEECTTEE----STTCCE
T ss_pred             EeECcEEeecCcCCCceeECCCCCe----ecCccc
Confidence            34 578854  34678999999999    877763