Psyllid ID: psy11800

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Protein Sequence
MSAVAPTEAAMALHWASAGPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGGKYTAWLFP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEccccccEEEEcccccccccccccccccccccccccccccccEEEEccccEEEEcccccEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccEEcccccccccccccccccccccccEEEEccccEEEEcccccEEcccccccccccccccccccccEEccc
Secondary Structure Prediction (SSPRO)
ccccccHHHcccccccccccEEEccccccEEEEEcccccccccccccEEEEcHHHccccccccccEEEcccccEEEEcccccEEcccccEEEcccccccccccccccccccccccccccccHHccccccccccEEEcccccEEEEcccccEEcccccEEEEcHHHccccccccccEEEcccccEEEEcccccEEcccccEEEEcHHcccccccccccccc
Coil and Loop (DISEMBL)
MSAVAPTEAAMALHWasagpavvhstytglsetqtytglsdslslgvsdlnvdecyenpliclngrcdntlgsyrcacqpgyspspdggfcvdrdecrtpgdhdecsqkKKKKKkkkklyhdecsqngmcangmcinmdgsfkcqckpgfvlsptghacidvdecyenpliclngrcdntlgsyrcacqpgyspspdggfcvdrdecrtpggkytawlfp
Flexible Loop (DISEMBL)
MSAVAPTEAAMALHWASAGPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRtpgdhdecsqkkkkkkkkkklyhdecsqngMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGGKYTAWLFP
Low Complexity Region (SEG)
MSAVAPTEAAMALHWASAGPAVVHSTYTGLSETQTYTglsdslslgvsdlNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQkkkkkkkkkkLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGGKYTAWLFP
Disordered region (IsUnstruct)
**********MALHWASAGPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYS*****GFCV**********************************NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGGKYTAWL**
Disordered Region (DISOPRED)
MSAVAPTEAAMALHWASAGPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGGKYTAWLFP
Disordered Region (DISEMBL)
**********MALHWASAGPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR***********************DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGGKYTAWLFP
Disordered Region (DISPRO)
MSAVAPTEAAMALHWASAGPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGGKYTAWLFP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSAVAPTEAAMALHWASAGPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGGKYTAWLFP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	220	2.2.26 [Sep-21-2011]
P35556	2912	Fibrillin-2 OS=Homo sapie	yes	N/A	0.572	0.043	0.474	4e-31
Q61555	2907	Fibrillin-2 OS=Mus muscul	yes	N/A	0.572	0.043	0.467	5e-31
Q61554	2871	Fibrillin-1 OS=Mus muscul	no	N/A	0.568	0.043	0.490	6e-30
Q75N90	2809	Fibrillin-3 OS=Homo sapie	no	N/A	0.572	0.044	0.448	2e-28
P35555	2871	Fibrillin-1 OS=Homo sapie	no	N/A	0.568	0.043	0.477	4e-28
P98133	2871	Fibrillin-1 OS=Bos taurus	no	N/A	0.722	0.055	0.457	1e-27
Q9TV36	2871	Fibrillin-1 OS=Sus scrofa	no	N/A	0.718	0.055	0.454	3e-27
O35806	1764	Latent-transforming growt	no	N/A	0.718	0.089	0.422	7e-24
Q00918	1712	Latent-transforming growt	no	N/A	0.586	0.075	0.411	1e-23
Q8CG19	1712	Latent-transforming growt	no	N/A	0.586	0.075	0.411	1e-23

>sp|P35556|FBN2_HUMAN Fibrillin-2 OS=Homo sapiens GN=FBN2 PE=1 SV=3

 Score =  134 bits (338), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 90/154 (58%), Gaps = 28/154 (18%)

Query: 50  LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQK 109
           +++DEC +N ++C NGRC NT GS++C C  G+  + DG  CVD                
Sbjct: 574 IDIDECIQNGVLCKNGRCVNTDGSFQCICNAGFELTTDGKNCVD---------------- 617

Query: 110 KKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENP 169
                      HDEC+   MC NGMCIN DGSFKC CKPGFVL+P G  C DVDEC + P
Sbjct: 618 -----------HDECTTTNMCLNGMCINEDGSFKCICKPGFVLAPNGRYCTDVDEC-QTP 665

Query: 170 LICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
            IC+NG C N+ GS+RC C PG +   DG  CVD
Sbjct: 666 GICMNGHCINSEGSFRCDCPPGLAVGMDGRVCVD 699

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.
Homo sapiens (taxid: 9606)

>sp|Q61555|FBN2_MOUSE Fibrillin-2 OS=Mus musculus GN=Fbn2 PE=1 SV=2

 Score =  134 bits (337), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 89/154 (57%), Gaps = 28/154 (18%)

Query: 50  LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQK 109
           +++DEC +N ++C NGRC NT GS++C C  G+  + DG  CVD                
Sbjct: 567 IDIDECIQNGVLCKNGRCVNTDGSFQCICNAGFELTTDGKNCVD---------------- 610

Query: 110 KKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENP 169
                      HDEC+   MC NGMCIN DGSFKC CKPGF+L+P G  C DVDEC + P
Sbjct: 611 -----------HDECTTTNMCLNGMCINEDGSFKCVCKPGFILAPNGRYCTDVDEC-QTP 658

Query: 170 LICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
            IC+NG C N  GS+RC C PG +   DG  CVD
Sbjct: 659 GICMNGHCINNEGSFRCDCPPGLAVGVDGRVCVD 692

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Mus musculus (taxid: 10090)

>sp|Q61554|FBN1_MOUSE Fibrillin-1 OS=Mus musculus GN=Fbn1 PE=1 SV=1

 Score =  130 bits (327), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/153 (49%), Positives = 87/153 (56%), Gaps = 28/153 (18%)

Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKK 110
           ++DEC +N  IC NGRC NT GS+ C C  G+  S +G  C D DECRTP          
Sbjct: 530 DIDECLQNGRICNNGRCINTDGSFHCVCNAGFHVSSEGKNCEDMDECRTPN--------- 580

Query: 111 KKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPL 170
                             MC NGMCIN DGSFKC CKPGF L+  G  C D++EC E P 
Sbjct: 581 ------------------MCPNGMCINEDGSFKCICKPGFQLASDGRYCKDINEC-ETPG 621

Query: 171 ICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
           IC+NGRC NT GSYRC C PG +   DG +CVD
Sbjct: 622 ICMNGRCVNTDGSYRCECFPGLAVGLDGRWCVD 654

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Mus musculus (taxid: 10090)

>sp|Q75N90|FBN3_HUMAN Fibrillin-3 OS=Homo sapiens GN=FBN3 PE=2 SV=3

 Score =  125 bits (314), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 89/154 (57%), Gaps = 28/154 (18%)

Query: 50  LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQK 109
           ++VDEC  +  +C  GRC NT GS++C C  G+  SPDG  CVD                
Sbjct: 488 VDVDECIVSGGLCHLGRCVNTEGSFQCVCNAGFELSPDGKNCVD---------------- 531

Query: 110 KKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENP 169
                      H+EC+ + MC NG+C+N DGSF C CKPGF+L+P GH C+D+DEC + P
Sbjct: 532 -----------HNECATSTMCVNGVCLNEDGSFSCLCKPGFLLAPGGHYCMDIDEC-QTP 579

Query: 170 LICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
            IC+NG C NT GS+RC C  G +   DG  CVD
Sbjct: 580 GICVNGHCTNTEGSFRCQCLGGLAVGTDGRVCVD 613

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-containing microfibrils provide long-term force bearing structural support.

Homo sapiens (taxid: 9606)

>sp|P35555|FBN1_HUMAN Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3

 Score =  124 bits (312), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/153 (47%), Positives = 84/153 (54%), Gaps = 28/153 (18%)

Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKK 110
           ++DEC +N  IC NGRC NT GS+ C C  G+  + DG  C D                 
Sbjct: 530 DIDECLQNGRICNNGRCINTDGSFHCVCNAGFHVTRDGKNCED----------------- 572

Query: 111 KKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPL 170
                      DECS   MC NGMCIN DGSFKC CKPGF L+  G  C D++EC E P 
Sbjct: 573 ----------MDECSIRNMCLNGMCINEDGSFKCICKPGFQLASDGRYCKDINEC-ETPG 621

Query: 171 ICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
           IC+NGRC NT GSYRC C PG +   DG  CVD
Sbjct: 622 ICMNGRCVNTDGSYRCECFPGLAVGLDGRVCVD 654

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Homo sapiens (taxid: 9606)

>sp|P98133|FBN1_BOVIN Fibrillin-1 OS=Bos taurus GN=FBN1 PE=1 SV=1

 Score =  122 bits (307), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 93/177 (52%), Gaps = 18/177 (10%)

Query: 42  SLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 101
            L L    ++VDEC +NP  C  G C NT GSY C C+PGY  +     C D DEC   G
Sbjct: 481 QLDLRGECIDVDECEKNP--CAGGECINTQGSYTCQCRPGYQSTLTRTECRDIDECLQNG 538

Query: 102 D--------------HDECSQKKKKKKKKKKLY-HDECSQNGMCANGMCINMDGSFKCQC 146
                          H  C+      +  K     DECS   MC NGMCIN DGSFKC C
Sbjct: 539 RICNNGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDECSIRNMCLNGMCINEDGSFKCIC 598

Query: 147 KPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
           KPGF L+  G  C D++EC E   IC+NGRC NT GSYRC C PG +   DG  CVD
Sbjct: 599 KPGFQLASDGRYCKDINEC-ETLGICMNGRCVNTDGSYRCECFPGLAVGLDGRVCVD 654

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Bos taurus (taxid: 9913)

>sp|Q9TV36|FBN1_PIG Fibrillin-1 OS=Sus scrofa GN=FBN1 PE=2 SV=1

 Score =  122 bits (305), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/176 (45%), Positives = 92/176 (52%), Gaps = 18/176 (10%)

Query: 43  LSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGD 102
           L L    ++VDEC +NP  C  G C N  GSY C C+PGY  +     C D DEC   G 
Sbjct: 482 LDLRGECIDVDECEKNP--CAGGECINNQGSYTCQCRPGYQSTLTRTECRDIDECLQNGR 539

Query: 103 --------------HDECSQKKKKKKKKKKLY-HDECSQNGMCANGMCINMDGSFKCQCK 147
                         H  C+      +  K     DECS   MC NGMCIN DGSFKC CK
Sbjct: 540 ICNNGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDECSIRNMCLNGMCINEDGSFKCICK 599

Query: 148 PGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
           PGF L+  G  C D++EC E   IC+NGRC NT GSYRC C PG +   DG  CVD
Sbjct: 600 PGFQLASDGRYCKDINEC-ETSGICMNGRCVNTDGSYRCECFPGLAVGLDGRVCVD 654

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Sus scrofa (taxid: 9823)

>sp|O35806|LTBP2_RAT Latent-transforming growth factor beta-binding protein 2 OS=Rattus norvegicus GN=Ltbp2 PE=2 SV=1

 Score =  110 bits (275), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 92/175 (52%), Gaps = 17/175 (9%)

Query: 51   NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDE----- 105
            +VDEC E P +C  GRC NT GSY C C  GY      G C D +ECR PG   +     
Sbjct: 920  DVDEC-EQPGVCSGGRCSNTEGSYHCECDQGYV-MVRRGHCQDINECRHPGTCPDGRCVN 977

Query: 106  --------CSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGH 157
                      ++    +    +  +EC   G+CA+G CINM+GSF+C C+PG+ L+P   
Sbjct: 978  SPGSYTCLACEEGYIGQSGNCVDMNECLTPGICAHGRCINMEGSFRCSCEPGYELTPDKK 1037

Query: 158  ACIDVDECYENPLICLNGRCDNTLGSYRC-ACQPGYSPSPDGGFCVDRDECRTPG 211
             C DVDEC      C  G C NT GS+ C ACQ GY  + DG  C D DEC  PG
Sbjct: 1038 GCRDVDECASR-ASCPTGLCLNTEGSFTCSACQSGYWVNEDGTACEDLDECAFPG 1091

May play an integral structural role in elastic-fiber architectural organization and/or assembly. May be involved in the assembly, secretion and targeting of TGF- beta to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGF-beta. May have a structural role in the extra cellular matrix (ECM).

Rattus norvegicus (taxid: 10116)

>sp|Q00918|LTBP1_RAT Latent-transforming growth factor beta-binding protein 1 OS=Rattus norvegicus GN=Ltbp1 PE=1 SV=1

 Score =  110 bits (274), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 82/158 (51%), Gaps = 29/158 (18%)

Query: 50   LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQK 109
            L+VDEC + P +C NG C N  GSY C+C  GYSP+PD   C D DEC+           
Sbjct: 1029 LDVDECLQ-PKVCTNGSCTNLEGSYMCSCHKGYSPTPDHRHCQDIDECQ----------- 1076

Query: 110  KKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENP 169
                            Q  +C NG C N DGSF+C C  G+ LS     C D+DEC E+ 
Sbjct: 1077 ----------------QGNLCMNGQCKNTDGSFRCTCGQGYQLSAAKDQCEDIDEC-EHR 1119

Query: 170  LICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 207
             +C +G+C NT GS++C C  GY  S  G  C D +EC
Sbjct: 1120 HLCSHGQCRNTEGSFQCLCNQGYRASVLGDHCEDINEC 1157

May be involved in the assembly, secretion and targeting of TGFB1 to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGFB1. May have a structural role in the extra cellular matrix (ECM).

Rattus norvegicus (taxid: 10116)

>sp|Q8CG19|LTBP1_MOUSE Latent-transforming growth factor beta-binding protein 1 OS=Mus musculus GN=Ltbp1 PE=2 SV=2

 Score =  109 bits (273), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 82/158 (51%), Gaps = 29/158 (18%)

Query: 50   LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQK 109
            L+VDEC + P +C NG C N  GSY C+C  GYSP+PD   C D DEC+           
Sbjct: 1029 LDVDECLQ-PKVCTNGSCTNLEGSYMCSCHRGYSPTPDHRHCQDIDECQ----------- 1076

Query: 110  KKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENP 169
                            Q  +C NG C N DGSF+C C  G+ LS     C D+DEC E+ 
Sbjct: 1077 ----------------QGNLCMNGQCRNTDGSFRCTCGQGYQLSAAKDQCEDIDEC-EHH 1119

Query: 170  LICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 207
             +C +G+C NT GS++C C  GY  S  G  C D +EC
Sbjct: 1120 HLCSHGQCRNTEGSFQCVCNQGYRASVLGDHCEDINEC 1157

May be involved in the assembly, secretion and targeting of TGFB1 to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGFB1. May have a structural role in the extra cellular matrix (ECM).

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
242016322	2816	Fibrillin-2 precursor, putative [Pedicul	0.604	0.047	0.515	1e-37
270001930	2865	hypothetical protein TcasGA2_TC000836 [T	0.622	0.047	0.530	3e-37
189234367	2933	PREDICTED: similar to fibrillin 2 [Tribo	0.6	0.045	0.540	3e-37
328715164	3100	PREDICTED: fibrillin-2-like [Acyrthosiph	0.604	0.042	0.512	2e-36
321472519	2762	hypothetical protein DAPPUDRAFT_315775 [	0.854	0.068	0.418	6e-36
307166306	2876	Fibrillin-2 [Camponotus floridanus]	0.740	0.056	0.485	6e-34
322786670	458	hypothetical protein SINV_08004 [Solenop	0.736	0.353	0.488	1e-33
332018680	2757	Fibrillin-2 [Acromyrmex echinatior]	0.736	0.058	0.483	2e-33
380016550	2868	PREDICTED: fibrillin-2-like [Apis florea	0.6	0.046	0.490	1e-32
307196014	2862	Fibrillin-2 [Harpegnathos saltator]	0.718	0.055	0.477	1e-32

>gi|242016322|ref|XP_002428778.1| Fibrillin-2 precursor, putative [Pediculus humanus corporis] gi|212513463|gb|EEB16040.1| Fibrillin-2 precursor, putative [Pediculus humanus corporis]

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/161 (51%), Positives = 102/161 (63%), Gaps = 28/161 (17%)

Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKK 110
           ++DEC +    C  GRC NT GS++C C  GY  S DG FC+D                 
Sbjct: 390 DIDECRDRGY-CQGGRCLNTPGSFQCNCPVGYDVSSDGKFCID----------------- 431

Query: 111 KKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPL 170
                     HDEC QNGMCANG+C+NM+G+F C+C  GFVLSPTGH+C+D+DECYENP 
Sbjct: 432 ----------HDECQQNGMCANGVCVNMNGTFTCKCHKGFVLSPTGHSCVDIDECYENPR 481

Query: 171 ICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211
           ICLNGRC N  GS+RC C PG++ S DG FC+D+DEC   G
Sbjct: 482 ICLNGRCQNVPGSHRCICLPGFTLSEDGTFCIDKDECAETG 522

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270001930|gb|EEZ98377.1| hypothetical protein TcasGA2_TC000836 [Tribolium castaneum]

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/166 (53%), Positives = 98/166 (59%), Gaps = 29/166 (17%)

Query: 46  GVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDE 105
           G   + +DEC E    C NGRC NT GS+ C C PG+  SPDG  C D            
Sbjct: 456 GHMQVYIDECREGK--CQNGRCTNTPGSFTCVCPPGFDVSPDGRICTD------------ 501

Query: 106 CSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165
                          HDEC++ GMC NG+CINMDGSFKCQCK GF LSPTG ACID+DEC
Sbjct: 502 ---------------HDECAEIGMCTNGICINMDGSFKCQCKSGFKLSPTGFACIDIDEC 546

Query: 166 YENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211
           YENP ICLNGRC+N  GSY C C PG+  S D  FC D DEC   G
Sbjct: 547 YENPRICLNGRCNNIPGSYTCTCLPGFVESSDKTFCSDLDECANTG 592

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234367|ref|XP_974344.2| PREDICTED: similar to fibrillin 2 [Tribolium castaneum]

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/161 (54%), Positives = 97/161 (60%), Gaps = 29/161 (18%)

Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKK 110
           ++DEC E    C NGRC NT GS+ C C PG+  SPDG  C D                 
Sbjct: 463 DIDECREGK--CQNGRCTNTPGSFTCVCPPGFDVSPDGRICTD----------------- 503

Query: 111 KKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPL 170
                     HDEC++ GMC NG+CINMDGSFKCQCK GF LSPTG ACID+DECYENP 
Sbjct: 504 ----------HDECAEIGMCTNGICINMDGSFKCQCKSGFKLSPTGFACIDIDECYENPR 553

Query: 171 ICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211
           ICLNGRC+N  GSY C C PG+  S D  FC D DEC   G
Sbjct: 554 ICLNGRCNNIPGSYTCTCLPGFVESSDKTFCSDLDECANTG 594

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328715164|ref|XP_001945971.2| PREDICTED: fibrillin-2-like [Acyrthosiphon pisum]

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/162 (51%), Positives = 106/162 (65%), Gaps = 29/162 (17%)

Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKK 110
           +++EC +   IC NG+C+NT GS+ C+C PGY  + DG  C+D                 
Sbjct: 597 DINECAQQG-ICNNGQCNNTPGSFICSCPPGYDLASDGKRCID----------------- 638

Query: 111 KKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPL 170
                     H+EC +NGMCANG C+N+ GSF+C+CK GFV+S TGH+CID+DECYENP 
Sbjct: 639 ----------HNECEKNGMCANGKCLNVQGSFQCRCKSGFVMSQTGHSCIDIDECYENPK 688

Query: 171 ICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC-RTPG 211
           ICLNG+C NT GSY C CQPGY+ SPDG FC D +EC + PG
Sbjct: 689 ICLNGKCRNTPGSYICECQPGYTVSPDGTFCTDINECEKRPG 730

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321472519|gb|EFX83489.1| hypothetical protein DAPPUDRAFT_315775 [Daphnia pulex]

 Score =  156 bits (394), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/220 (41%), Positives = 117/220 (53%), Gaps = 32/220 (14%)

Query: 11  MALHWASAG-----PAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLICLNG 65
           M   W   G     P V   TY  L +   +               ++EC   P IC  G
Sbjct: 266 MGKGWGDNGVCEMCPLVSDDTYAQLCQEAGHLS------------KINECILRPDICGAG 313

Query: 66  RCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG--DHDECSQK------------KK 111
           +C +T   Y+C C+PGY   P G  C D DEC+  G     +C+                
Sbjct: 314 KCIDTPDGYKCECKPGYDVGPTG-ICEDIDECKLKGYCQGGQCTNLVGSYTCSCPPGFDL 372

Query: 112 KKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLI 171
               K+ L HDEC + GMCA+G+CINMDGSFKCQC+ G+ LSP+GH+C+D+DEC ENP I
Sbjct: 373 SSDGKQCLDHDECGETGMCAHGICINMDGSFKCQCQEGYALSPSGHSCVDLDECAENPRI 432

Query: 172 CLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211
           CLNGRC+N  GS+ C C+ G+S S  G FCVD DEC   G
Sbjct: 433 CLNGRCENIPGSFECVCEEGFSSSAVGPFCVDMDECGQTG 472

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307166306|gb|EFN60488.1| Fibrillin-2 [Camponotus floridanus]

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 103/177 (58%), Gaps = 14/177 (7%)

Query: 48  SDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC---------- 97
           S   V+EC   P IC +G+C +T   Y C C PG++  P GG C D DEC          
Sbjct: 399 SITEVNECVLRPDICGDGKCIDTKEGYECECYPGFTRKP-GGRCEDVDECLLGYCQGGIC 457

Query: 98  -RTPGDHD-ECSQKKKKKKKKKKLY-HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSP 154
              PG    +C          +    HDEC   GMC NG CINM+GSFKC+C  G+ LSP
Sbjct: 458 HNQPGSFTCDCPHGFVVSGDGRYCTDHDECQDTGMCTNGHCINMNGSFKCECNDGYTLSP 517

Query: 155 TGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211
           T + CID++EC ENP ICLNGRC+NT GSY C CQ G++PS D  FCVD DEC T G
Sbjct: 518 TRNTCIDINECVENPRICLNGRCENTPGSYHCICQSGFTPSRDNTFCVDMDECSTSG 574

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322786670|gb|EFZ13054.1| hypothetical protein SINV_08004 [Solenopsis invicta]

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/178 (48%), Positives = 104/178 (58%), Gaps = 16/178 (8%)

Query: 48  SDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT-------- 99
           S   V+EC   P IC +G+C +T   Y C C PG++  P GG C D DEC+         
Sbjct: 244 SITEVNECALRPDICGDGKCIDTKEGYECECYPGFAKKP-GGRCEDVDECQLDYCQGGTC 302

Query: 100 ---PGDHDECSQKKKKKKKKKKLY---HDECSQNGMCANGMCINMDGSFKCQCKPGFVLS 153
              PG    C          +  Y   HDEC   GMC NG CINM+GSFKC+C  G+ LS
Sbjct: 303 RNYPGSF-ACDCPPGFVVSGEGRYCTDHDECQDTGMCTNGHCINMNGSFKCKCNDGYTLS 361

Query: 154 PTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211
           PT + CID++EC ENP ICLNGRC+NT GSY C CQ G++PS D  FCVD DEC T G
Sbjct: 362 PTRNTCIDINECIENPRICLNGRCENTPGSYHCICQSGFTPSRDNTFCVDMDECSTSG 419

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018680|gb|EGI59252.1| Fibrillin-2 [Acromyrmex echinatior]

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/178 (48%), Positives = 103/178 (57%), Gaps = 16/178 (8%)

Query: 48  SDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT-------- 99
           S   V+EC   P IC +G+C +T   Y C C PG++  P GG C D DEC+         
Sbjct: 292 SITEVNECVLRPDICGDGKCIDTKEGYECECYPGFTRKP-GGRCEDVDECQLDYCQGGIC 350

Query: 100 ---PGDHDECSQKKKKKKKKKKLY---HDECSQNGMCANGMCINMDGSFKCQCKPGFVLS 153
              PG    C          +  Y   HDEC   GMC NG CINM+GSFKC+C  G+ LS
Sbjct: 351 RNYPGSF-ACDCPPGFVVSGEGRYCTDHDECQDTGMCTNGHCINMNGSFKCKCNDGYALS 409

Query: 154 PTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211
           PT + CID++EC ENP ICLNG C+NT GSY C CQ G++PS D  FCVD DEC T G
Sbjct: 410 PTKNTCIDINECIENPRICLNGHCENTPGSYHCICQSGFTPSRDNTFCVDMDECSTSG 467

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016550|ref|XP_003692245.1| PREDICTED: fibrillin-2-like [Apis florea]

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/161 (49%), Positives = 94/161 (58%), Gaps = 29/161 (18%)

Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKK 110
           ++DEC      C  G C N  GS+ C C PG+  S +G +C D                 
Sbjct: 443 DIDECLLG--YCQGGTCRNYEGSFSCQCPPGFVVSGEGRYCTD----------------- 483

Query: 111 KKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPL 170
                     HDEC   GMC NG CINM+GSFKC+C  G+VLSPT + CID++EC ENP 
Sbjct: 484 ----------HDECQDTGMCNNGHCINMNGSFKCKCNDGYVLSPTKNTCIDINECAENPR 533

Query: 171 ICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211
           ICLNGRC+NT GSY C CQPG++PS D  FCVD DEC T G
Sbjct: 534 ICLNGRCENTPGSYHCICQPGFTPSRDNTFCVDMDECSTSG 574

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196014|gb|EFN77739.1| Fibrillin-2 [Harpegnathos saltator]

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/174 (47%), Positives = 102/174 (58%), Gaps = 16/174 (9%)

Query: 52  VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT-----------P 100
           V+EC   P IC +G C +T   Y C C PG++  P GG C D DEC+            P
Sbjct: 403 VNECALRPDICGDGHCIDTKEGYECECYPGFTRKP-GGRCEDVDECQLGYCQGGTCRNYP 461

Query: 101 GDHDECSQKKKKKKKKKKLY---HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGH 157
           G    C          +  Y   HDEC   GMC NG CINM+GSFKC+C  G+ LSP+ +
Sbjct: 462 GSF-ACDCPPGFVVSGEGRYCTDHDECQDTGMCTNGRCINMNGSFKCKCNDGYTLSPSKN 520

Query: 158 ACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211
            C+D++EC +NP ICLNGRC+NT GSY C CQ G++PS D  FCVD DEC T G
Sbjct: 521 TCVDINECLDNPRICLNGRCENTPGSYHCICQSGFTPSRDNTFCVDMDECSTSG 574

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
UNIPROTKB|F1NRR1	347	FBN2 "Uncharacterized protein"	0.586	0.371	0.413	2e-24
ZFIN|ZDB-GENE-090112-3	2868	fbn2b "fibrillin 2b" [Danio re	0.681	0.052	0.470	1.4e-35
UNIPROTKB|D6RJI3	1473	FBN2 "Fibrillin-2" [Homo sapie	0.681	0.101	0.470	2.1e-34
UNIPROTKB|F1RKK1	2432	FBN2 "Uncharacterized protein"	0.681	0.061	0.470	2.8e-34
UNIPROTKB|I3LJJ0	2433	FBN2 "Uncharacterized protein"	0.681	0.061	0.470	2.8e-34
UNIPROTKB|P35556	2912	FBN2 "Fibrillin-2" [Homo sapie	0.681	0.051	0.470	5.2e-34
UNIPROTKB|E2RS46	2921	FBN2 "Uncharacterized protein"	0.681	0.051	0.470	6.6e-34
MGI|MGI:95490	2907	Fbn2 "fibrillin 2" [Mus muscul	0.681	0.051	0.464	8.4e-34
UNIPROTKB|F1MTZ4	3672	Bt.110891 "Uncharacterized pro	0.681	0.040	0.464	1.1e-33
RGD|620910	2906	Fbn2 "fibrillin 2" [Rattus nor	0.681	0.051	0.464	1.4e-33

UNIPROTKB|F1NRR1 FBN2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 60/145 (41%), Positives = 74/145 (51%)

Query:    52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC-----------RTP 100
             +D C  +P +CLNGRC  T+ SYRC C  GY    +G  C+D DEC            TP
Sbjct:   205 IDICKHHPNLCLNGRCIPTISSYRCECNMGYKQDANGD-CIDVDECTSNPCSNGDCVNTP 263

Query:   101 GDHD-ECSQXXXXXXXXXXLYH-DECSQNG-MCANGMCINMDGSFKCQCKPGFVLSPTGH 157
             G +  +C                DEC QNG +C NG C+N DGSF+C C  GF L+  G 
Sbjct:   264 GSYYCKCHAGFQRTPTKQACIDIDECIQNGVLCKNGRCVNTDGSFQCICNAGFELTTDGK 323

Query:   158 ACIDVDECYENPLICLNGRCDNTLG 182
              C+D DEC    + CLNG C N  G
Sbjct:   324 NCVDHDECTTTNM-CLNGMCINEDG 347

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

ZFIN|ZDB-GENE-090112-3 fbn2b "fibrillin 2b" [Danio rerio (taxid:7955)]

 Score = 395 (144.1 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
 Identities = 79/168 (47%), Positives = 95/168 (56%)

Query:    51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG--------- 101
             +VDEC  NP  C+NG C NT GSY C C  GY  +P    C+D DEC   G         
Sbjct:   495 DVDECVSNP--CVNGDCVNTQGSYHCKCHEGYQGTPTKQACIDIDECIVNGVMCRNGRCV 552

Query:   102 DHD---EC---SQXXXXXXXXXXLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
             + D   +C   +           + HDEC+   MC NGMCIN DGSFKC CKPGF L+P 
Sbjct:   553 NTDGSFQCICNAGFEISPDGKNCIDHDECATTNMCLNGMCINEDGSFKCICKPGFALAPN 612

Query:   156 GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
             G  C D+DEC+ +  IC+NGRC NT GS+RC C PG +   DG  CVD
Sbjct:   613 GRYCTDIDECHTSG-ICMNGRCVNTEGSFRCECPPGLAIDVDGRVCVD 659

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0003007 "heart morphogenesis" evidence=IMP

GO:0001570 "vasculogenesis" evidence=IMP

GO:0048570 "notochord morphogenesis" evidence=IGI;IMP

GO:0003160 "endocardium morphogenesis" evidence=IMP

UNIPROTKB|D6RJI3 FBN2 "Fibrillin-2" [Homo sapiens (taxid:9606)]

 Score = 387 (141.3 bits), Expect = 2.1e-34, P = 2.1e-34
 Identities = 79/168 (47%), Positives = 91/168 (54%)

Query:    51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC------------- 97
             +VDEC  NP  C NG C NT GSY C C  G+  +P    C+D DEC             
Sbjct:   502 DVDECTSNP--CTNGDCVNTPGSYYCKCHAGFQRTPTKQACIDIDECIQNGVLCKNGRCV 559

Query:    98 RTPGDHD-ECSQXXXXXXXXXXLY-HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
              T G     C+              HDEC+   MC NGMCIN DGSFKC CKPGFVL+P 
Sbjct:   560 NTDGSFQCICNAGFELTTDGKNCVDHDECTTTNMCLNGMCINEDGSFKCICKPGFVLAPN 619

Query:   156 GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
             G  C DVDEC + P IC+NG C N+ GS+RC C PG +   DG  CVD
Sbjct:   620 GRYCTDVDEC-QTPGICMNGHCINSEGSFRCDCPPGLAVGMDGRVCVD 666

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

UNIPROTKB|F1RKK1 FBN2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 386 (140.9 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
 Identities = 79/168 (47%), Positives = 90/168 (53%)

Query:    51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC------------- 97
             +VDEC  NP  C NG C NT GSY C C  G+  +P    C+D DEC             
Sbjct:    48 DVDECTSNP--CTNGDCVNTPGSYYCKCHAGFQRTPTKQACIDIDECIQNGVLCKNGRCV 105

Query:    98 RTPGDHD-ECSQXXXXXXXXXXLY-HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
              T G     C+              HDEC+   MC NGMCIN DGSFKC CKPGFVL+P 
Sbjct:   106 NTDGSFQCICNAGFELTTDGKNCVDHDECTTTNMCLNGMCINEDGSFKCICKPGFVLAPN 165

Query:   156 GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
             G  C DVDEC + P IC+NG C N  GS+RC C PG +   DG  CVD
Sbjct:   166 GRYCTDVDEC-QTPGICMNGHCINNEGSFRCDCPPGLAVGVDGRVCVD 212

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

UNIPROTKB|I3LJJ0 FBN2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 386 (140.9 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
 Identities = 79/168 (47%), Positives = 90/168 (53%)

Query:    51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC------------- 97
             +VDEC  NP  C NG C NT GSY C C  G+  +P    C+D DEC             
Sbjct:    48 DVDECTSNP--CTNGDCVNTPGSYYCKCHAGFQRTPTKQACIDIDECIQNGVLCKNGRCV 105

Query:    98 RTPGDHD-ECSQXXXXXXXXXXLY-HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
              T G     C+              HDEC+   MC NGMCIN DGSFKC CKPGFVL+P 
Sbjct:   106 NTDGSFQCICNAGFELTTDGKNCVDHDECTTTNMCLNGMCINEDGSFKCICKPGFVLAPN 165

Query:   156 GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
             G  C DVDEC + P IC+NG C N  GS+RC C PG +   DG  CVD
Sbjct:   166 GRYCTDVDEC-QTPGICMNGHCINNEGSFRCDCPPGLAVGVDGRVCVD 212

GO:0060346 "bone trabecula formation" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

UNIPROTKB|P35556 FBN2 "Fibrillin-2" [Homo sapiens (taxid:9606)]

 Score = 387 (141.3 bits), Expect = 5.2e-34, P = 5.2e-34
 Identities = 79/168 (47%), Positives = 91/168 (54%)

Query:    51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC------------- 97
             +VDEC  NP  C NG C NT GSY C C  G+  +P    C+D DEC             
Sbjct:   535 DVDECTSNP--CTNGDCVNTPGSYYCKCHAGFQRTPTKQACIDIDECIQNGVLCKNGRCV 592

Query:    98 RTPGDHD-ECSQXXXXXXXXXXLY-HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
              T G     C+              HDEC+   MC NGMCIN DGSFKC CKPGFVL+P 
Sbjct:   593 NTDGSFQCICNAGFELTTDGKNCVDHDECTTTNMCLNGMCINEDGSFKCICKPGFVLAPN 652

Query:   156 GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
             G  C DVDEC + P IC+NG C N+ GS+RC C PG +   DG  CVD
Sbjct:   653 GRYCTDVDEC-QTPGICMNGHCINSEGSFRCDCPPGLAVGMDGRVCVD 699

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=TAS

GO:0009653 "anatomical structure morphogenesis" evidence=TAS

GO:0030501 "positive regulation of bone mineralization" evidence=ISS

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=ISS

GO:0045669 "positive regulation of osteoblast differentiation" evidence=ISS

GO:0060346 "bone trabecula formation" evidence=ISS

GO:0001527 "microfibril" evidence=TAS

UNIPROTKB|E2RS46 FBN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 386 (140.9 bits), Expect = 6.6e-34, P = 6.6e-34
 Identities = 79/168 (47%), Positives = 90/168 (53%)

Query:    51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC------------- 97
             +VDEC  NP  C NG C NT GSY C C  G+  +P    C+D DEC             
Sbjct:   544 DVDECTSNP--CTNGDCVNTPGSYYCKCHAGFQRTPTKQACIDIDECIQNGVLCKNGRCV 601

Query:    98 RTPGDHD-ECSQXXXXXXXXXXLY-HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
              T G     C+              HDEC+   MC NGMCIN DGSFKC CKPGFVL+P 
Sbjct:   602 NTDGSFQCICNAGFELTTDGKNCVDHDECTTTNMCLNGMCINEDGSFKCICKPGFVLAPN 661

Query:   156 GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
             G  C DVDEC + P IC+NG C N  GS+RC C PG +   DG  CVD
Sbjct:   662 GRYCTDVDEC-QTPGICMNGHCINNEGSFRCDCPPGLAVGVDGRVCVD 708

GO:0060346 "bone trabecula formation" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

MGI|MGI:95490 Fbn2 "fibrillin 2" [Mus musculus (taxid:10090)]

 Score = 385 (140.6 bits), Expect = 8.4e-34, P = 8.4e-34
 Identities = 78/168 (46%), Positives = 90/168 (53%)

Query:    51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC------------- 97
             +VDEC  NP  C NG C NT GSY C C  G+  +P    C+D DEC             
Sbjct:   528 DVDECTSNP--CSNGDCVNTPGSYYCKCHAGFQRTPTKQACIDIDECIQNGVLCKNGRCV 585

Query:    98 RTPGDHD-ECSQXXXXXXXXXXLY-HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
              T G     C+              HDEC+   MC NGMCIN DGSFKC CKPGF+L+P 
Sbjct:   586 NTDGSFQCICNAGFELTTDGKNCVDHDECTTTNMCLNGMCINEDGSFKCVCKPGFILAPN 645

Query:   156 GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
             G  C DVDEC + P IC+NG C N  GS+RC C PG +   DG  CVD
Sbjct:   646 GRYCTDVDEC-QTPGICMNGHCINNEGSFRCDCPPGLAVGVDGRVCVD 692

GO:0001527 "microfibril" evidence=TAS

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=TAS

GO:0005576 "extracellular region" evidence=TAS

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IMP

GO:0030501 "positive regulation of bone mineralization" evidence=IMP

GO:0035108 "limb morphogenesis" evidence=IMP

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IMP

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IMP

GO:0060346 "bone trabecula formation" evidence=IMP

UNIPROTKB|F1MTZ4 Bt.110891 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 385 (140.6 bits), Expect = 1.1e-33, P = 1.1e-33
 Identities = 78/168 (46%), Positives = 90/168 (53%)

Query:    51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC------------- 97
             +VDEC  NP  C NG C NT GSY C C  G+  +P    C+D DEC             
Sbjct:   451 DVDECTSNP--CTNGDCVNTPGSYYCKCHAGFQRTPTKQACIDIDECIQNGVLCKNGRCV 508

Query:    98 RTPGDHD-ECSQXXXXXXXXXXLY-HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
              T G     C+              HDEC+   MC NGMCIN DGSFKC CKPGF+L+P 
Sbjct:   509 NTDGSFQCICNAGFELTTDGKNCVDHDECTTTNMCLNGMCINEDGSFKCICKPGFILAPN 568

Query:   156 GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
             G  C DVDEC + P IC+NG C N  GS+RC C PG +   DG  CVD
Sbjct:   569 GRYCTDVDEC-QTPGICMNGHCINNEGSFRCDCPPGLAVGVDGRVCVD 615

GO:0060346 "bone trabecula formation" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

RGD|620910 Fbn2 "fibrillin 2" [Rattus norvegicus (taxid:10116)]

 Score = 383 (139.9 bits), Expect = 1.4e-33, P = 1.4e-33
 Identities = 78/168 (46%), Positives = 90/168 (53%)

Query:    51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC------------- 97
             +VDEC  NP  C +G C NT GSY C C  G+  +P    C+D DEC             
Sbjct:   527 DVDECTSNP--CSHGDCVNTPGSYYCKCHAGFQRTPTKQACIDIDECIQNGVLCKNGRCV 584

Query:    98 RTPGDHD-ECSQXXXXXXXXXXLY-HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
              T G     C+              HDEC+   MC NGMCIN DGSFKC CKPGFVL+P 
Sbjct:   585 NTDGSFQCICNAGFELTTDGENCVGHDECTTTNMCLNGMCINEDGSFKCVCKPGFVLAPN 644

Query:   156 GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
             G  C DVDEC + P IC+NG C N  GS+RC C PG +   DG  CVD
Sbjct:   645 GRCCTDVDEC-QTPGICMNGHCINNEGSFRCDCPPGLAVGVDGRVCVD 691

GO:0030326 "embryonic limb morphogenesis" evidence=ISO

GO:0030501 "positive regulation of bone mineralization" evidence=ISO

GO:0035108 "limb morphogenesis" evidence=ISO

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=ISO

GO:0045669 "positive regulation of osteoblast differentiation" evidence=ISO

GO:0060346 "bone trabecula formation" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	220
pfam12662	24	pfam12662, cEGF, Complement Clr-like EGF-like	1e-05
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	1e-05
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	2e-05
smart00181	35	smart00181, EGF, Epidermal growth factor-like doma	2e-05
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	3e-05
pfam07645	42	pfam07645, EGF_CA, Calcium-binding EGF domain	4e-05
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	5e-05
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	7e-05
pfam12662	24	pfam12662, cEGF, Complement Clr-like EGF-like	2e-04
pfam12662	24	pfam12662, cEGF, Complement Clr-like EGF-like	2e-04
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	2e-04
pfam07645	42	pfam07645, EGF_CA, Calcium-binding EGF domain	3e-04
pfam07645	42	pfam07645, EGF_CA, Calcium-binding EGF domain	0.001
cd01475	224	cd01475, vWA_Matrilin, VWA_Matrilin: In cartilagin	0.001
smart00181	35	smart00181, EGF, Epidermal growth factor-like doma	0.003
smart00181	35	smart00181, EGF, Epidermal growth factor-like doma	0.003
cd00053	36	cd00053, EGF, Epidermal growth factor domain, foun	0.004

>gnl|CDD|221695 pfam12662, cEGF, Complement Clr-like EGF-like

 Score = 40.5 bits (96), Expect = 1e-05
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 141 SFKCQCKPGFVLSPTGHACIDVDE 164
           S+ C C PG+ LS  G  C D+DE
Sbjct: 1   SYTCSCPPGYQLSGDGRTCEDIDE 24

cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteristic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue. Length = 24

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 122 DECSQNGMCANG-MCINMDGSFKCQCKPGF 150
           DEC+    C NG  C+N  GS++C+C PG+
Sbjct: 3   DECASGNPCQNGGTCVNTVGSYRCECPPGY 32

Length = 39

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 40.3 bits (95), Expect = 2e-05
 Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 5/43 (11%)

Query: 161 DVDECYENPLICLNG-RCDNTLGSYRCACQPGYSPSPDGGFCV 202
           D+DEC      C NG  C NT+GSYRC C PGY+   DG  C 
Sbjct: 1   DIDECASGN-PCQNGGTCVNTVGSYRCECPPGYT---DGRNCE 39

Length = 39

>gnl|CDD|214544 smart00181, EGF, Epidermal growth factor-like domain

 Score = 40.2 bits (94), Expect = 2e-05
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 123 ECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
           EC+  G C+NG CIN  GS+ C C PG+     
Sbjct: 1   ECASGGPCSNGTCINTPGSYTCSCPPGYTGDKR 33

Length = 35

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 122 DECSQNGMCAN-GMCINMDGSFKCQCKPGFVL 152
           DEC+    C N G C+N  GS++C C PG+  
Sbjct: 3   DECASGNPCQNGGTCVNTVGSYRCSCPPGYTG 34

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|219496 pfam07645, EGF_CA, Calcium-binding EGF domain

 Score = 39.3 bits (92), Expect = 4e-05
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 161 DVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFC 201
           DVDEC +    C  N  C NT+GS+ C C  GY  + DG  C
Sbjct: 1   DVDECADGTHNCPANTVCVNTIGSFECVCPDGYENNEDGTNC 42

Length = 42

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 39.2 bits (92), Expect = 5e-05
 Identities = 17/33 (51%), Positives = 21/33 (63%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYS 193
           D+DEC         G C NT+GSYRC+C PGY+
Sbjct: 1   DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT 33

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 5/43 (11%)

Query: 51 NVDECYENPLICLNG-RCDNTLGSYRCACQPGYSPSPDGGFCV 92
          ++DEC      C NG  C NT+GSYRC C PGY+   DG  C 
Sbjct: 1  DIDECASGN-PCQNGGTCVNTVGSYRCECPPGYT---DGRNCE 39

Length = 39

>gnl|CDD|221695 pfam12662, cEGF, Complement Clr-like EGF-like

 Score = 37.4 bits (88), Expect = 2e-04
 Identities = 14/24 (58%), Positives = 15/24 (62%)

Query: 73 SYRCACQPGYSPSPDGGFCVDRDE 96
          SY C+C PGY  S DG  C D DE
Sbjct: 1  SYTCSCPPGYQLSGDGRTCEDIDE 24

cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteristic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue. Length = 24

>gnl|CDD|221695 pfam12662, cEGF, Complement Clr-like EGF-like

 Score = 37.4 bits (88), Expect = 2e-04
 Identities = 14/24 (58%), Positives = 15/24 (62%)

Query: 183 SYRCACQPGYSPSPDGGFCVDRDE 206
           SY C+C PGY  S DG  C D DE
Sbjct: 1   SYTCSCPPGYQLSGDGRTCEDIDE 24

cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteristic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue. Length = 24

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYS 83
          ++DEC         G C NT+GSYRC+C PGY+
Sbjct: 1  DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT 33

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|219496 pfam07645, EGF_CA, Calcium-binding EGF domain

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 52 VDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFC 91
          VDEC +    C  N  C NT+GS+ C C  GY  + DG  C
Sbjct: 2  VDECADGTHNCPANTVCVNTIGSFECVCPDGYENNEDGTNC 42

Length = 42

>gnl|CDD|219496 pfam07645, EGF_CA, Calcium-binding EGF domain

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 122 DECSQNG-MCANGM-CINMDGSFKCQCKPGFVLSPTGHAC 159
           DEC+     C     C+N  GSF+C C  G+  +  G  C
Sbjct: 3   DECADGTHNCPANTVCVNTIGSFECVCPDGYENNEDGTNC 42

Length = 42

>gnl|CDD|238752 cd01475, vWA_Matrilin, VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 159 CIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDG 198
           C+  D C     +C    C +T GSY CAC  GY+   D 
Sbjct: 184 CVVPDLCATLSHVCQQV-CISTPGSYLCACTEGYALLEDN 222

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands. Length = 224

>gnl|CDD|214544 smart00181, EGF, Epidermal growth factor-like domain

 Score = 34.0 bits (78), Expect = 0.003
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 54 ECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD 87
          EC      C NG C NT GSY C+C PGY+    
Sbjct: 1  ECASGG-PCSNGTCINTPGSYTCSCPPGYTGDKR 33

Length = 35

>gnl|CDD|214544 smart00181, EGF, Epidermal growth factor-like domain

 Score = 34.0 bits (78), Expect = 0.003
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 164 ECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD 197
           EC      C NG C NT GSY C+C PGY+    
Sbjct: 1   ECASGG-PCSNGTCINTPGSYTCSCPPGYTGDKR 33

Length = 35

>gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

 Score = 33.6 bits (77), Expect = 0.004
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 123 ECSQNGMCAN-GMCINMDGSFKCQCKPGFVLSPT 155
           EC+ +  C+N G C+N  GS++C C PG+    +
Sbjct: 1   ECAASNPCSNGGTCVNTPGSYRCVCPPGYTGDRS 34

Length = 36

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	220
KOG1214|consensus	1289		99.65
KOG1219|consensus	4289		99.35
KOG1214|consensus	1289		99.13
KOG1219|consensus	4289		99.01
KOG1217|consensus	487		98.87
KOG4289|consensus	2531		98.65
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.61
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.6
KOG1217|consensus	487		98.59
PF12662	24	cEGF: Complement Clr-like EGF-like	98.45
KOG4289|consensus	2531		98.29
PF12662	24	cEGF: Complement Clr-like EGF-like	98.14
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	98.13
KOG4260|consensus	350		98.12
KOG4260|consensus	350		98.02
KOG1225|consensus	525		97.92
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	97.77
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.74
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.7
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.62
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.57
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.41
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.36
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.31
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.03
KOG1225|consensus	525		97.02
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	96.99
smart00181	35	EGF Epidermal growth factor-like domain.	96.76
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	96.56
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.53
KOG0994|consensus	1758		96.24
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	96.15
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.05
smart00181	35	EGF Epidermal growth factor-like domain.	95.73
KOG1226|consensus	783		95.4
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	95.02
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	93.31
KOG1226|consensus	783		92.11
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	91.98
KOG0994|consensus	1758		91.93
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	89.35
PHA02887	126	EGF-like protein; Provisional	85.04
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	83.31

>KOG1214|consensus

Probab=99.65  E-value=1.3e-15  Score=131.73  Aligned_cols=141  Identities=37%  Similarity=0.748  Sum_probs=110.7

Q ss_pred             ccccc--cCCCCCCCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCcccccccc
Q psy11800         36 YTGLS--DSLSLGVSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKK  112 (220)
Q Consensus        36 ~~~~~--~~~~~g~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~  112 (220)
                      |++++  ..+.+|.+|.++++|+..++.| .+..|++.+++|+|.|..||....++.+|..+..=.+             
T Consensus       716 ~tcecs~g~~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap-------------  782 (1289)
T KOG1214|consen  716 YTCECSSGYQGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAP-------------  782 (1289)
T ss_pred             eEEEEeeccCCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCC-------------
Confidence            45555  5666788999999999988889 8899999999999999999998888888876522111             


Q ss_pred             ccccccccccccCCC-CCC-CC--ceEecCC-CCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEecCCCCeEE
Q psy11800        113 KKKKKKLYHDECSQN-GMC-AN--GMCINMD-GSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTLGSYRC  186 (220)
Q Consensus       113 ~~~~~~~~~~~C~~~-~~c-~~--~~C~~~~-~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~~~~~C  186 (220)
                              .+.|... ..| .+  +.|+... +.|.|.|.+||.+  +|..|.++|+|.++.  |+. +.|.+++++|.|
T Consensus       783 --------~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsG--DG~~c~dvDeC~psr--Chp~A~CyntpgsfsC  850 (1289)
T KOG1214|consen  783 --------ANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSG--DGHQCTDVDECSPSR--CHPAATCYNTPGSFSC  850 (1289)
T ss_pred             --------CCccccCccccCcCCceEEEecCCceEEEeecCCccC--CccccccccccCccc--cCCCceEecCCCccee
Confidence                    1445433 333 22  4666554 5699999999976  789999999998665  985 899999999999


Q ss_pred             eCCCCCccCCCCCCCCc
Q psy11800        187 ACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       187 ~C~~G~~~~~~g~~C~~  203 (220)
                      +|.+||.  .+|..|.+
T Consensus       851 ~C~pGy~--GDGf~CVP  865 (1289)
T KOG1214|consen  851 RCQPGYY--GDGFQCVP  865 (1289)
T ss_pred             ecccCcc--CCCceecC
Confidence            9999998  57888853

>KOG1219|consensus

Probab=99.35  E-value=3e-12  Score=120.02  Aligned_cols=109  Identities=39%  Similarity=0.963  Sum_probs=89.6

Q ss_pred             CccCCCCCCC-CCCeeeeCC-CceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCC
Q psy11800         53 DECYENPLIC-LNGRCDNTL-GSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMC  130 (220)
Q Consensus        53 ~~C~~~~~~C-~~~~C~~~~-g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c  130 (220)
                      +.|..+|  | +.|.|+..+ +.|.|.|++.|.    |+.|+                          +++++|..+++-
T Consensus      3865 d~C~~np--CqhgG~C~~~~~ggy~CkCpsqys----G~~CE--------------------------i~~epC~snPC~ 3912 (4289)
T KOG1219|consen 3865 DPCNDNP--CQHGGTCISQPKGGYKCKCPSQYS----GNHCE--------------------------IDLEPCASNPCL 3912 (4289)
T ss_pred             cccccCc--ccCCCEecCCCCCceEEeCccccc----Ccccc--------------------------cccccccCCCCC
Confidence            8898888  8 558999876 669999999887    45554                          345677655555


Q ss_pred             CCceEecCCCCeEeecCCCcEeCCCCCcee--ecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        131 ANGMCINMDGSFKCQCKPGFVLSPTGHACI--DVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       131 ~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~--~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      .+++|+...++|.|.|+.||    +|..|+  .+++|..+.  |.+ |.|+|..|+|.|.|.+||.    |..|..
T Consensus      3913 ~GgtCip~~n~f~CnC~~gy----TG~~Ce~~Gi~eCs~n~--C~~gg~C~n~~gsf~CncT~g~~----gr~c~~ 3978 (4289)
T KOG1219|consen 3913 TGGTCIPFYNGFLCNCPNGY----TGKRCEARGISECSKNV--CGTGGQCINIPGSFHCNCTPGIL----GRTCCA 3978 (4289)
T ss_pred             CCCEEEecCCCeeEeCCCCc----cCceeeccccccccccc--ccCCceeeccCCceEeccChhHh----cccCcc
Confidence            56899999999999999999    899993  389998776  987 8999999999999999998    888843

>KOG1214|consensus

Probab=99.13  E-value=4.8e-10  Score=97.90  Aligned_cols=130  Identities=37%  Similarity=0.936  Sum_probs=95.3

Q ss_pred             CccCCCCCCC-CCCeeeeCC-CceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCC
Q psy11800         53 DECYENPLIC-LNGRCDNTL-GSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMC  130 (220)
Q Consensus        53 ~~C~~~~~~C-~~~~C~~~~-g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c  130 (220)
                      +.|....+.| .++.|.... -.|+|.|..||.+  +++.|.+.++|...                          ...|
T Consensus       693 npCy~gsh~cdt~a~C~pg~~~~~tcecs~g~~g--dgr~c~d~~eca~~--------------------------~~~C  744 (1289)
T KOG1214|consen  693 NPCYDGSHMCDTTARCHPGTGVDYTCECSSGYQG--DGRNCVDENECATG--------------------------FHRC  744 (1289)
T ss_pred             ccceecCcccCCCccccCCCCcceEEEEeeccCC--CCCCCCChhhhccC--------------------------CCCC
Confidence            3444334455 446676554 3588888888875  47778777554431                          2334


Q ss_pred             -CCceEecCCCCeEeecCCCcEeCCCCCceee------cCcCCCCCCCCC-C--CeEecCC-CCeEEeCCCCCccCCCCC
Q psy11800        131 -ANGMCINMDGSFKCQCKPGFVLSPTGHACID------VDECYENPLICL-N--GRCDNTL-GSYRCACQPGYSPSPDGG  199 (220)
Q Consensus       131 -~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~------i~~C~~~~~~C~-~--~~C~~~~-~~~~C~C~~G~~~~~~g~  199 (220)
                       .+++|++.++.|+|+|..||....++.+|..      ++.|..+.+.|+ +  +.|+... +.|.|.|.+||+  .+|.
T Consensus       745 Gp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfs--GDG~  822 (1289)
T KOG1214|consen  745 GPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFS--GDGH  822 (1289)
T ss_pred             CCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEecCCceEEEeecCCcc--CCcc
Confidence             4689999999999999999998878889953      567888877896 3  4677765 469999999998  6789


Q ss_pred             CCCcCCCCCCCCC
Q psy11800        200 FCVDRDECRTPGG  212 (220)
Q Consensus       200 ~C~~~~~C~~~~~  212 (220)
                      .|.++|+|.+.+.
T Consensus       823 ~c~dvDeC~psrC  835 (1289)
T KOG1214|consen  823 QCTDVDECSPSRC  835 (1289)
T ss_pred             ccccccccCcccc
Confidence            9999999986643

>KOG1219|consensus

Probab=99.01  E-value=9.8e-10  Score=103.86  Aligned_cols=107  Identities=33%  Similarity=0.709  Sum_probs=88.7

Q ss_pred             CCCcccCCCCCCCCCCC----CccccccCCCCCCCC-CCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCc
Q psy11800         18 AGPAVVHSTYTGLSETQ----TYTGLSDSLSLGVSD-LNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFC   91 (220)
Q Consensus        18 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~C-~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C   91 (220)
                      +.+|.-+|+..|+.|..    .|.|.|...|.|..| .++.+|.++|  | ..+.|+...+.|.|.|+.||+    |+.|
T Consensus      3864 ~d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~snP--C~~GgtCip~~n~f~CnC~~gyT----G~~C 3937 (4289)
T KOG1219|consen 3864 TDPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCASNP--CLTGGTCIPFYNGFLCNCPNGYT----GKRC 3937 (4289)
T ss_pred             ccccccCcccCCCEecCCCCCceEEeCcccccCcccccccccccCCC--CCCCCEEEecCCCeeEeCCCCcc----Ccee
Confidence            36788888888877765    499999999999999 6899999999  9 669999999999999999998    6777


Q ss_pred             cCCCcccCCCCCCccccccccccccccccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCce
Q psy11800         92 VDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC  159 (220)
Q Consensus        92 ~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C  159 (220)
                      +..+                         +++|..+.+-..|.|++.+|+|+|.|.+||    .|+.|
T Consensus      3938 e~~G-------------------------i~eCs~n~C~~gg~C~n~~gsf~CncT~g~----~gr~c 3976 (4289)
T KOG1219|consen 3938 EARG-------------------------ISECSKNVCGTGGQCINIPGSFHCNCTPGI----LGRTC 3976 (4289)
T ss_pred             eccc-------------------------ccccccccccCCceeeccCCceEeccChhH----hcccC
Confidence            6531                         367755555556899999999999999999    55555

>KOG1217|consensus

Probab=98.87  E-value=3.7e-08  Score=84.53  Aligned_cols=163  Identities=34%  Similarity=0.663  Sum_probs=113.2

Q ss_pred             CccccccCCCCCCCCCCC-CccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCcccccccc
Q psy11800         35 TYTGLSDSLSLGVSDLNV-DECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKK  112 (220)
Q Consensus        35 ~~~~~~~~~~~g~~C~~i-~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~  112 (220)
                      .+.+.+..+|.+..+... ++|......| +.+.|.+..++|.|.|+++|.+...... .....|...   ..|.+..++
T Consensus       151 ~~~c~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~-~~~~~c~~~---~~~~~~~g~  226 (487)
T KOG1217|consen  151 PFRCSCTEGYEGEPCETDLDECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCETT-GNGGTCVDS---VACSCPPGA  226 (487)
T ss_pred             ceeeeeCCCcccccccccccccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcCC-CCCceEecc---eeccCCCCC
Confidence            355666777778888543 7888655558 4589999999999999999985432221 111222222   456777777


Q ss_pred             ccccccccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEecCCCCeEEeCCCC
Q psy11800        113 KKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTLGSYRCACQPG  191 (220)
Q Consensus       113 ~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G  191 (220)
                      .+..+...+.+|...   . ++|++..++++|.|++||.+... ..+.++++|..... |.+ +.|++..+.|.|.|++|
T Consensus       227 ~~~~c~~~~~~~~~~---~-~~c~~~~~~~~C~~~~g~~~~~~-~~~~~~~~C~~~~~-c~~~~~C~~~~~~~~C~C~~g  300 (487)
T KOG1217|consen  227 RGPECEVSIVECASG---D-GTCVNTVGSYTCRCPEGYTGDAC-VTCVDVDSCALIAS-CPNGGTCVNVPGSYRCTCPPG  300 (487)
T ss_pred             CCCCcccccccccCC---C-CcccccCCceeeeCCCCcccccc-ceeeeccccCCCCc-cCCCCeeecCCCcceeeCCCC
Confidence            777777766666443   3 68888888899999999955321 35688999998764 875 89999999999999999


Q ss_pred             CccCCCCCCCCcCCCCC
Q psy11800        192 YSPSPDGGFCVDRDECR  208 (220)
Q Consensus       192 ~~~~~~g~~C~~~~~C~  208 (220)
                      |..... ..+.+..+|.
T Consensus       301 ~~g~~~-~~~~~~~~C~  316 (487)
T KOG1217|consen  301 FTGRLC-TECVDVDECS  316 (487)
T ss_pred             CCCCCC-cccccccccc
Confidence            993222 1233445564

>KOG4289|consensus

Probab=98.65  E-value=4.4e-08  Score=90.06  Aligned_cols=93  Identities=29%  Similarity=0.641  Sum_probs=74.8

Q ss_pred             CCCCccccccccccccccccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCcee-e--cCcCCCCCCCCCC-Ce
Q psy11800        101 GDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACI-D--VDECYENPLICLN-GR  176 (220)
Q Consensus       101 ~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~-~--i~~C~~~~~~C~~-~~  176 (220)
                      .+...|.|++||+|..|+.++|.|-..++-+++.|....++|+|.|.+||    .|.+|+ +  .-.|.++  .|.| ++
T Consensus      1219 vnglrCrCPpGFTgd~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~----tGehCEvs~~agrCvpG--vC~nggt 1292 (2531)
T KOG4289|consen 1219 VNGLRCRCPPGFTGDYCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGF----TGEHCEVSARAGRCVPG--VCKNGGT 1292 (2531)
T ss_pred             cCceeEeCCCCCCcccccchhHhhhcCCCCCCCceEEecCceeEEecCCc----cccceeeecccCccccc--eecCCCE
Confidence            45678999999999999999999977777778999999999999999999    889993 2  2346554  4887 79


Q ss_pred             EecCC-CCeEEeCCCCCccCCCCCCCC
Q psy11800        177 CDNTL-GSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       177 C~~~~-~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      |++.. ++|.|+|+.|-.   .+..|+
T Consensus      1293 C~~~~nggf~c~Cp~ge~---e~prC~ 1316 (2531)
T KOG4289|consen 1293 CVNLLNGGFCCHCPYGEF---EDPRCE 1316 (2531)
T ss_pred             EeecCCCceeccCCCccc---CCCceE
Confidence            99864 789999998832   355565

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.61  E-value=2.7e-08  Score=56.15  Aligned_cols=39  Identities=56%  Similarity=1.147  Sum_probs=33.3

Q ss_pred             ecCcCCCCCCCCC-CCeEecCCCCeEEeCCCCCccCCCCC
Q psy11800        161 DVDECYENPLICL-NGRCDNTLGSYRCACQPGYSPSPDGG  199 (220)
Q Consensus       161 ~i~~C~~~~~~C~-~~~C~~~~~~~~C~C~~G~~~~~~g~  199 (220)
                      |||||+..++.|. ++.|+|+.|+|.|.|++||.+..++.
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~~~   40 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDDGT   40 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTTSS
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCCCC
Confidence            6899998888897 48999999999999999998554443

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.60  E-value=4e-08  Score=55.49  Aligned_cols=38  Identities=55%  Similarity=1.161  Sum_probs=32.5

Q ss_pred             CCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCC
Q psy11800         51 NVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDG   88 (220)
Q Consensus        51 ~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~   88 (220)
                      |||||...++.| .++.|+|+.|+|.|.|++||.....+
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~~   39 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDDG   39 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTTS
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCCC
Confidence            589999887789 57999999999999999999854433

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1217|consensus

Probab=98.59  E-value=1.3e-06  Score=74.98  Aligned_cols=139  Identities=43%  Similarity=0.892  Sum_probs=99.8

Q ss_pred             CeeeeCCCceEeeCCCCCccCC-----CCCCcc------CCCcccCCCCCCccccccccccccc--cccccccC---CCC
Q psy11800         65 GRCDNTLGSYRCACQPGYSPSP-----DGGFCV------DRDECRTPGDHDECSQKKKKKKKKK--KLYHDECS---QNG  128 (220)
Q Consensus        65 ~~C~~~~g~~~C~C~~g~~~~~-----~~~~C~------~~~~C~~~~~~~~C~c~~~~~~~~~--~~~~~~C~---~~~  128 (220)
                      +.|.+..++|.|.|++||.+..     +...|.      ....|......+.|.|..+|.+..+  ..+...|.   ...
T Consensus       243 ~~c~~~~~~~~C~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~~~~~~~~~C~~~~~~~  322 (487)
T KOG1217|consen  243 GTCVNTVGSYTCRCPEGYTGDACVTCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLCTECVDVDECSPRNAGG  322 (487)
T ss_pred             CcccccCCceeeeCCCCccccccceeeeccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCCccccccccccccccCC
Confidence            6888888899999999998764     222232      2334444445588999999999998  33445674   223


Q ss_pred             CCCC-ceE--ecCCCCeEeecCCCcEeCCCCCceeec-CcCCCCCCCCCC-CeEec-CCCCeEEeCCCCCccC--CCCCC
Q psy11800        129 MCAN-GMC--INMDGSFKCQCKPGFVLSPTGHACIDV-DECYENPLICLN-GRCDN-TLGSYRCACQPGYSPS--PDGGF  200 (220)
Q Consensus       129 ~c~~-~~C--~~~~~~~~C~C~~G~~~~~~g~~C~~i-~~C~~~~~~C~~-~~C~~-~~~~~~C~C~~G~~~~--~~g~~  200 (220)
                      .|.+ +.|  ......+.|.|..+|    .+..|... ++|...+  +.+ +.|++ ..+.|.|.|..+|.+.  .++..
T Consensus       323 ~c~~g~~C~~~~~~~~~~C~c~~~~----~g~~C~~~~~~C~~~~--~~~~~~c~~~~~~~~~c~~~~~~~~~~~~~~~~  396 (487)
T KOG1217|consen  323 PCANGGTCNTLGSFGGFRCACGPGF----TGRRCEDSNDECASSP--CCPGGTCVNETPGSYRCACPAGFAGKANGDGVG  396 (487)
T ss_pred             cCCCCcccccCCCCCCCCcCCCCCC----CCCccccCCccccCCc--cccCCEeccCCCCCeEecCCCccccCCcccccc
Confidence            3444 366  333456789999997    88999777 4898776  554 79999 7899999999999853  56677


Q ss_pred             CCcCCCCCC
Q psy11800        201 CVDRDECRT  209 (220)
Q Consensus       201 C~~~~~C~~  209 (220)
                      +.++++|..
T Consensus       397 ~~~~~~c~~  405 (487)
T KOG1217|consen  397 CEDIDECSG  405 (487)
T ss_pred             ccccccccC
Confidence            888888865

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=98.45  E-value=2e-07  Score=45.24  Aligned_cols=24  Identities=63%  Similarity=1.263  Sum_probs=22.7

Q ss_pred             CeEEeCCCCCccCCCCCCCCcCCC
Q psy11800        183 SYRCACQPGYSPSPDGGFCVDRDE  206 (220)
Q Consensus       183 ~~~C~C~~G~~~~~~g~~C~~~~~  206 (220)
                      +|.|.|++||.+.++++.|++|||
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            689999999999999999999987

>KOG4289|consensus

Probab=98.29  E-value=1.3e-06  Score=80.76  Aligned_cols=60  Identities=30%  Similarity=0.681  Sum_probs=49.9

Q ss_pred             CCCCCCCCccccccCCCCCCCC-CCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC
Q psy11800         28 TGLSETQTYTGLSDSLSLGVSD-LNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~g~~C-~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      +-+.--..+.|.|+++|.|..| ++||+|.+.|  | ++++|....|.|+|.|.+||+    |.+|+.
T Consensus      1214 Rpi~pvnglrCrCPpGFTgd~CeTeiDlCYs~p--C~nng~C~srEggYtCeCrpg~t----GehCEv 1275 (2531)
T KOG4289|consen 1214 RPIHPVNGLRCRCPPGFTGDYCETEIDLCYSGP--CGNNGRCRSREGGYTCECRPGFT----GEHCEV 1275 (2531)
T ss_pred             eeccccCceeEeCCCCCCcccccchhHhhhcCC--CCCCCceEEecCceeEEecCCcc----ccceee
Confidence            3344445678888889999999 6899999988  9 889999999999999999999    566653

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=98.14  E-value=1.9e-06  Score=41.87  Aligned_cols=24  Identities=54%  Similarity=1.315  Sum_probs=22.1

Q ss_pred             CeEeecCCCcEeCCCCCceeecCc
Q psy11800        141 SFKCQCKPGFVLSPTGHACIDVDE  164 (220)
Q Consensus       141 ~~~C~C~~G~~~~~~g~~C~~i~~  164 (220)
                      +|+|+|++||++.++++.|.||||
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            589999999999999999999986

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=98.13  E-value=1.4e-06  Score=47.05  Aligned_cols=31  Identities=52%  Similarity=1.043  Sum_probs=25.1

Q ss_pred             CCCCCCeEecCCCCeEEeCCCCCccCCCCCCC
Q psy11800        170 LICLNGRCDNTLGSYRCACQPGYSPSPDGGFC  201 (220)
Q Consensus       170 ~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C  201 (220)
                      +.|.+ .|++++++|+|.|++||.|+.|+++|
T Consensus         6 GgC~h-~C~~~~g~~~C~C~~Gy~L~~D~~tC   36 (36)
T PF14670_consen    6 GGCSH-ICVNTPGSYRCSCPPGYKLAEDGRTC   36 (36)
T ss_dssp             GGSSS-EEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred             CCcCC-CCccCCCceEeECCCCCEECcCCCCC
Confidence            34765 89999999999999999999988865

...

>KOG4260|consensus

Probab=98.12  E-value=2.7e-06  Score=65.95  Aligned_cols=81  Identities=40%  Similarity=0.850  Sum_probs=57.7

Q ss_pred             eCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCC-CCceEecCCCCeEeecCCCcEeCCC
Q psy11800         77 ACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMC-ANGMCINMDGSFKCQCKPGFVLSPT  155 (220)
Q Consensus        77 ~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c-~~~~C~~~~~~~~C~C~~G~~~~~~  155 (220)
                      .|..||.+.  ...|.++++|...                          ...| .+..|+|+.|+|+|.+.+||    .
T Consensus       221 kCkkGW~ld--e~gCvDvnEC~~e--------------------------p~~c~~~qfCvNteGSf~C~dk~Gy----~  268 (350)
T KOG4260|consen  221 KCKKGWKLD--EEGCVDVNECQNE--------------------------PAPCKAHQFCVNTEGSFKCEDKEGY----K  268 (350)
T ss_pred             hhcccceec--ccccccHHHHhcC--------------------------CCCCChhheeecCCCceEecccccc----c
Confidence            588888874  5667777655432                          1233 24589999999999999999    3


Q ss_pred             CCceeecCcCCCCCCCCC--CCeEecCCCCeEEeCCCCCc
Q psy11800        156 GHACIDVDECYENPLICL--NGRCDNTLGSYRCACQPGYS  193 (220)
Q Consensus       156 g~~C~~i~~C~~~~~~C~--~~~C~~~~~~~~C~C~~G~~  193 (220)
                      +    ++|+|..--..|.  +..|.|+.++|+|.|..|+.
T Consensus       269 ~----g~d~C~~~~d~~~~kn~~c~ni~~~~r~v~f~~~~  304 (350)
T KOG4260|consen  269 K----GVDECQFCADVCASKNRPCMNIDGQYRCVCFSGLI  304 (350)
T ss_pred             C----ChHHhhhhhhhcccCCCCcccCCccEEEEecccce
Confidence            3    2666654212253  46899999999999998875

>KOG4260|consensus

Probab=98.02  E-value=1.6e-05  Score=61.74  Aligned_cols=51  Identities=39%  Similarity=0.898  Sum_probs=42.8

Q ss_pred             eEe-ecCCCcEeCCCCCceeecCcCCCCCCCCC-CCeEecCCCCeEEeCCCCCcc
Q psy11800        142 FKC-QCKPGFVLSPTGHACIDVDECYENPLICL-NGRCDNTLGSYRCACQPGYSP  194 (220)
Q Consensus       142 ~~C-~C~~G~~~~~~g~~C~~i~~C~~~~~~C~-~~~C~~~~~~~~C~C~~G~~~  194 (220)
                      ..| +|..||.+  +-..|.|||+|+..+-+|. +..|+|+.|+|.|.+.+||..
T Consensus       217 k~C~kCkkGW~l--de~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~  269 (350)
T KOG4260|consen  217 KGCSKCKKGWKL--DEEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK  269 (350)
T ss_pred             CChhhhccccee--cccccccHHHHhcCCCCCChhheeecCCCceEecccccccC
Confidence            346 68999988  4667999999997776786 469999999999999999984

>KOG1225|consensus

Probab=97.92  E-value=0.00014  Score=62.62  Aligned_cols=123  Identities=29%  Similarity=0.660  Sum_probs=75.1

Q ss_pred             cccccCCCCCCCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCC-CccCCCcccCCC--CCCcccccccc
Q psy11800         37 TGLSDSLSLGVSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGG-FCVDRDECRTPG--DHDECSQKKKK  112 (220)
Q Consensus        37 ~~~~~~~~~g~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~-~C~~~~~C~~~~--~~~~C~c~~~~  112 (220)
                      .+.+...+.+..|+. -.|..   .| ..+.|.+.    +|+|++||++..... .|...  |....  ....|.|..+|
T Consensus       235 ic~c~~~~~g~~c~~-~~C~~---~c~~~g~c~~G----~CIC~~Gf~G~dC~e~~Cp~~--cs~~g~~~~g~CiC~~g~  304 (525)
T KOG1225|consen  235 ICECPEGYFGPLCST-IYCPG---GCTGRGQCVEG----RCICPPGFTGDDCDELVCPVD--CSGGGVCVDGECICNPGY  304 (525)
T ss_pred             eeecCCceeCCcccc-ccCCC---CCcccceEeCC----eEeCCCCCcCCCCCcccCCcc--cCCCceecCCEeecCCCc
Confidence            455555666777763 23432   24 33566544    489999999543222 23222  33322  23589999999


Q ss_pred             ccccccccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEecCCCCeEEeCCCC
Q psy11800        113 KKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTLGSYRCACQPG  191 (220)
Q Consensus       113 ~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G  191 (220)
                      +|..|.+..  |. ..+-.+|.|+  .+  +|.|.+||    .|..|...+        |.+ +.|++.     |.|..|
T Consensus       305 ~G~dCs~~~--cp-adC~g~G~Ci--~G--~C~C~~Gy----~G~~C~~~~--------C~~~g~cv~g-----C~C~~G  360 (525)
T KOG1225|consen  305 SGKDCSIRR--CP-ADCSGHGKCI--DG--ECLCDEGY----TGELCIQRA--------CSGGGQCVNG-----CKCKKG  360 (525)
T ss_pred             ccccccccc--CC-ccCCCCCccc--CC--ceEeCCCC----cCCcccccc--------cCCCceeccC-----ceeccC
Confidence            999887532  32 2233457887  22  89999999    777774331        554 566542     889999


Q ss_pred             Cc
Q psy11800        192 YS  193 (220)
Q Consensus       192 ~~  193 (220)
                      |+
T Consensus       361 w~  362 (525)
T KOG1225|consen  361 WR  362 (525)
T ss_pred             cc
Confidence            98

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=97.77  E-value=1.6e-05  Score=42.89  Aligned_cols=32  Identities=50%  Similarity=1.001  Sum_probs=24.8

Q ss_pred             CCCCCCCeeeeCCCceEeeCCCCCccCCCCCCc
Q psy11800         59 PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC   91 (220)
Q Consensus        59 ~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C   91 (220)
                      .+.|.+ .|++++++|+|.|++||.+..|+++|
T Consensus         5 NGgC~h-~C~~~~g~~~C~C~~Gy~L~~D~~tC   36 (36)
T PF14670_consen    5 NGGCSH-ICVNTPGSYRCSCPPGYKLAEDGRTC   36 (36)
T ss_dssp             GGGSSS-EEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred             CCCcCC-CCccCCCceEeECCCCCEECcCCCCC
Confidence            344643 89999999999999999998887765

...

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.74  E-value=1.4e-05  Score=43.22  Aligned_cols=35  Identities=57%  Similarity=1.169  Sum_probs=24.3

Q ss_pred             CCCCCCCCC-CCeEecCCCCeEEeCCCCCccCCCCCCC
Q psy11800        165 CYENPLICL-NGRCDNTLGSYRCACQPGYSPSPDGGFC  201 (220)
Q Consensus       165 C~~~~~~C~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C  201 (220)
                      |+.+++.|+ +|+|+++.++|.|+|.+||.  .+|..|
T Consensus         1 C~~~~~~C~~nA~C~~~~~~~~C~C~~Gy~--GdG~~C   36 (36)
T PF12947_consen    1 CLENNGGCHPNATCTNTGGSYTCTCKPGYE--GDGFFC   36 (36)
T ss_dssp             TTTGGGGS-TTCEEEE-TTSEEEEE-CEEE--CCSTCE
T ss_pred             CCCCCCCCCCCcEeecCCCCEEeECCCCCc--cCCcCC
Confidence            344445687 59999999999999999998  345543

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.70  E-value=8.3e-05  Score=40.76  Aligned_cols=37  Identities=59%  Similarity=1.291  Sum_probs=28.7

Q ss_pred             ecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCC
Q psy11800        161 DVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFC  201 (220)
Q Consensus       161 ~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C  201 (220)
                      ++++|... ..|.+ +.|++..++|.|.|++||.   ++..|
T Consensus         1 d~~~C~~~-~~C~~~~~C~~~~g~~~C~C~~g~~---~g~~C   38 (39)
T smart00179        1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT---DGRNC   38 (39)
T ss_pred             CcccCcCC-CCcCCCCEeECCCCCeEeECCCCCc---cCCcC
Confidence            36778763 24875 7999999999999999997   35555

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.62  E-value=0.00012  Score=40.07  Aligned_cols=31  Identities=61%  Similarity=1.440  Sum_probs=25.7

Q ss_pred             CCCccCC-CCCCC-CCCeeeeCCCceEeeCCCCCc
Q psy11800         51 NVDECYE-NPLIC-LNGRCDNTLGSYRCACQPGYS   83 (220)
Q Consensus        51 ~i~~C~~-~~~~C-~~~~C~~~~g~~~C~C~~g~~   83 (220)
                      ++++|.. .+  | .++.|+++.++|.|.|+.||.
T Consensus         1 d~~~C~~~~~--C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        1 DIDECASGNP--CQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             CcccCcCCCC--cCCCCEeECCCCCeEeECCCCCc
Confidence            3677876 44  8 557999999999999999997

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.57  E-value=4.1e-05  Score=41.34  Aligned_cols=29  Identities=52%  Similarity=0.992  Sum_probs=22.5

Q ss_pred             CCCCCCC-CCCeeeeCCCceEeeCCCCCcc
Q psy11800         56 YENPLIC-LNGRCDNTLGSYRCACQPGYSP   84 (220)
Q Consensus        56 ~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~   84 (220)
                      ..+++.| .++.|+++.++|.|.|.+||.+
T Consensus         2 ~~~~~~C~~nA~C~~~~~~~~C~C~~Gy~G   31 (36)
T PF12947_consen    2 LENNGGCHPNATCTNTGGSYTCTCKPGYEG   31 (36)
T ss_dssp             TTGGGGS-TTCEEEE-TTSEEEEE-CEEEC
T ss_pred             CCCCCCCCCCcEeecCCCCEEeECCCCCcc
Confidence            3344558 7899999999999999999997

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.41  E-value=9.4e-05  Score=38.90  Aligned_cols=23  Identities=48%  Similarity=1.226  Sum_probs=20.9

Q ss_pred             CCCC-CeEecCC-CCeEEeCCCCCc
Q psy11800        171 ICLN-GRCDNTL-GSYRCACQPGYS  193 (220)
Q Consensus       171 ~C~~-~~C~~~~-~~~~C~C~~G~~  193 (220)
                      +|.| |+|++.. +.|.|.|++||.
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~   29 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYT   29 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEE
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCc
Confidence            3887 8999998 899999999998

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.36  E-value=0.00012  Score=38.42  Aligned_cols=28  Identities=46%  Similarity=1.214  Sum_probs=23.2

Q ss_pred             cCCCCCCC-CCCeeeeCC-CceEeeCCCCCcc
Q psy11800         55 CYENPLIC-LNGRCDNTL-GSYRCACQPGYSP   84 (220)
Q Consensus        55 C~~~~~~C-~~~~C~~~~-g~~~C~C~~g~~~   84 (220)
                      |.++|  | ++++|++.. +.|.|.|++||++
T Consensus         1 C~~~~--C~n~g~C~~~~~~~y~C~C~~G~~G   30 (32)
T PF00008_consen    1 CSSNP--CQNGGTCIDLPGGGYTCECPPGYTG   30 (32)
T ss_dssp             TTTTS--STTTEEEEEESTSEEEEEEBTTEES
T ss_pred             CCCCc--CCCCeEEEeCCCCCEEeECCCCCcc
Confidence            34455  8 569999998 8999999999985

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.31  E-value=0.00051  Score=37.12  Aligned_cols=35  Identities=57%  Similarity=1.286  Sum_probs=27.3

Q ss_pred             cCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCC
Q psy11800        162 VDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFC  201 (220)
Q Consensus       162 i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C  201 (220)
                      +++|... ..|.+ +.|++..+.|.|.|++||.    +..|
T Consensus         2 ~~~C~~~-~~C~~~~~C~~~~~~~~C~C~~g~~----g~~C   37 (38)
T cd00054           2 IDECASG-NPCQNGGTCVNTVGSYRCSCPPGYT----GRNC   37 (38)
T ss_pred             cccCCCC-CCcCCCCEeECCCCCeEeECCCCCc----CCcC
Confidence            5677652 24875 7999999999999999998    6655

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.03  E-value=0.0014  Score=35.26  Aligned_cols=31  Identities=61%  Similarity=1.411  Sum_probs=25.0

Q ss_pred             CCccCC-CCCCC-CCCeeeeCCCceEeeCCCCCcc
Q psy11800         52 VDECYE-NPLIC-LNGRCDNTLGSYRCACQPGYSP   84 (220)
Q Consensus        52 i~~C~~-~~~~C-~~~~C~~~~g~~~C~C~~g~~~   84 (220)
                      +++|.. .+  | .++.|++..+.|.|.|+.||.+
T Consensus         2 ~~~C~~~~~--C~~~~~C~~~~~~~~C~C~~g~~g   34 (38)
T cd00054           2 IDECASGNP--CQNGGTCVNTVGSYRCSCPPGYTG   34 (38)
T ss_pred             cccCCCCCC--cCCCCEeECCCCCeEeECCCCCcC
Confidence            567765 44  8 4579999999999999999984

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>KOG1225|consensus

Probab=97.02  E-value=0.0043  Score=53.72  Aligned_cols=107  Identities=27%  Similarity=0.710  Sum_probs=66.6

Q ss_pred             eEeeCCCCCccCCC-CCCccCCCcccCCCCCCccccccccccccccccccccCCCCCCCC-ceEecCCCCeEeecCCCcE
Q psy11800         74 YRCACQPGYSPSPD-GGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCAN-GMCINMDGSFKCQCKPGFV  151 (220)
Q Consensus        74 ~~C~C~~g~~~~~~-~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~-~~C~~~~~~~~C~C~~G~~  151 (220)
                      ..|.|+.+|.+... ...|.......-.-...+|.|..||+|..|...  .|-..  |.+ +.+++.    .|.|.+|| 
T Consensus       234 ~ic~c~~~~~g~~c~~~~C~~~c~~~g~c~~G~CIC~~Gf~G~dC~e~--~Cp~~--cs~~g~~~~g----~CiC~~g~-  304 (525)
T KOG1225|consen  234 GICECPEGYFGPLCSTIYCPGGCTGRGQCVEGRCICPPGFTGDDCDEL--VCPVD--CSGGGVCVDG----ECICNPGY-  304 (525)
T ss_pred             ceeecCCceeCCccccccCCCCCcccceEeCCeEeCCCCCcCCCCCcc--cCCcc--cCCCceecCC----EeecCCCc-
Confidence            47888888874322 112222111111124678999999999988752  33222  333 344333    89999999 


Q ss_pred             eCCCCCceeecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800        152 LSPTGHACIDVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       152 ~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                         .|..|. +..|.   ..|.+ +.|+  .+  +|.|.+||.    |..|...
T Consensus       305 ---~G~dCs-~~~cp---adC~g~G~Ci--~G--~C~C~~Gy~----G~~C~~~  343 (525)
T KOG1225|consen  305 ---SGKDCS-IRRCP---ADCSGHGKCI--DG--ECLCDEGYT----GELCIQR  343 (525)
T ss_pred             ---cccccc-cccCC---ccCCCCCccc--CC--ceEeCCCCc----CCccccc
Confidence               778884 23353   23874 8998  23  599999999    8888654

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=96.99  E-value=0.00042  Score=51.21  Aligned_cols=132  Identities=25%  Similarity=0.588  Sum_probs=77.0

Q ss_pred             CCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcc----------------cCCC-----CCCccccccccccccccc
Q psy11800         61 ICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC----------------RTPG-----DHDECSQKKKKKKKKKKL  119 (220)
Q Consensus        61 ~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C----------------~~~~-----~~~~C~c~~~~~~~~~~~  119 (220)
                      .|.+|..+...+-|.|.|..||.+. +..+|+...+|                ....     ..+.|.|..+|+...-.-
T Consensus         7 ~CKNG~LiQMSNHfEC~Cnegfvl~-~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~vC   85 (197)
T PF06247_consen    7 ICKNGYLIQMSNHFECKCNEGFVLK-NENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQGVC   85 (197)
T ss_dssp             --BTEEEEEESSEEEEEESTTEEEE-ETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSSSE
T ss_pred             cccCCEEEEccCceEEEcCCCcEEc-cccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCCeE
Confidence            3888999999999999999999865 24455443333                3222     456788888887655433


Q ss_pred             cccccCCCCCCCCceEecCC---CCeEeecCCCcEeCCCCCce--eecCcCCCCCCCCC-CCeEecCCCCeEEeCCCCCc
Q psy11800        120 YHDECSQNGMCANGMCINMD---GSFKCQCKPGFVLSPTGHAC--IDVDECYENPLICL-NGRCDNTLGSYRCACQPGYS  193 (220)
Q Consensus       120 ~~~~C~~~~~c~~~~C~~~~---~~~~C~C~~G~~~~~~g~~C--~~i~~C~~~~~~C~-~~~C~~~~~~~~C~C~~G~~  193 (220)
                      ..+.|. .-.|..|.|+-.+   ....|+|.-|+.. .+...|  ..-.+|+..   |. +-.|....+-|.|.+..||.
T Consensus        86 vp~~C~-~~~Cg~GKCI~d~~~~~~~~CSC~IGkV~-~dn~kCtk~G~T~C~LK---Ck~nE~CK~~~~~Y~C~~~~~~~  160 (197)
T PF06247_consen   86 VPNKCN-NKDCGSGKCILDPDNPNNPTCSCNIGKVP-DDNKKCTKTGETKCSLK---CKENEECKLVDGYYKCVCKEGFP  160 (197)
T ss_dssp             EEGGGS-S---TTEEEEEEEGGGSEEEEEE-TEEET-TTTTESEEEE-----------TTTEEEEEETTEEEEEE-TT-E
T ss_pred             chhhcC-ceecCCCeEEecCCCCCCceeEeeeceEe-ccCCcccCCCccceeee---cCCCcceeeeCcEEEeecCCCCC
Confidence            335563 3445677786432   3458999999873 256667  334556544   64 46899999999999999998


Q ss_pred             cCCCC
Q psy11800        194 PSPDG  198 (220)
Q Consensus       194 ~~~~g  198 (220)
                      ....+
T Consensus       161 ~~~~~  165 (197)
T PF06247_consen  161 GDGEG  165 (197)
T ss_dssp             EETTT
T ss_pred             CCCCc
Confidence            54444

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.76  E-value=0.0037  Score=33.21  Aligned_cols=23  Identities=61%  Similarity=1.339  Sum_probs=20.0

Q ss_pred             CCCCCeEecCCCCeEEeCCCCCc
Q psy11800        171 ICLNGRCDNTLGSYRCACQPGYS  193 (220)
Q Consensus       171 ~C~~~~C~~~~~~~~C~C~~G~~  193 (220)
                      .|.++.|++..++|.|.|++||.
T Consensus         7 ~C~~~~C~~~~~~~~C~C~~g~~   29 (35)
T smart00181        7 PCSNGTCINTPGSYTCSCPPGYT   29 (35)
T ss_pred             CCCCCEEECCCCCeEeECCCCCc
Confidence            37644899999999999999998

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=96.56  E-value=0.0032  Score=48.94  Aligned_cols=44  Identities=36%  Similarity=0.737  Sum_probs=36.6

Q ss_pred             CCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCC
Q psy11800        155 TGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGG  199 (220)
Q Consensus       155 ~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~  199 (220)
                      .+..|.++++|...++.|.+ .|.++.++|.|.|+.||.+.++++
T Consensus       180 ~~~~C~~~~~C~~~~~~c~~-~C~~~~g~~~c~c~~g~~~~~~~~  223 (224)
T cd01475         180 QGKICVVPDLCATLSHVCQQ-VCISTPGSYLCACTEGYALLEDNK  223 (224)
T ss_pred             ccccCcCchhhcCCCCCccc-eEEcCCCCEEeECCCCccCCCCCC
Confidence            46678888999877766864 899999999999999999776654

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.53  E-value=0.0063  Score=32.07  Aligned_cols=23  Identities=65%  Similarity=1.408  Sum_probs=20.4

Q ss_pred             CCCC-CeEecCCCCeEEeCCCCCc
Q psy11800        171 ICLN-GRCDNTLGSYRCACQPGYS  193 (220)
Q Consensus       171 ~C~~-~~C~~~~~~~~C~C~~G~~  193 (220)
                      .|.+ +.|++..+.|.|.|+.||.
T Consensus         7 ~C~~~~~C~~~~~~~~C~C~~g~~   30 (36)
T cd00053           7 PCSNGGTCVNTPGSYRCVCPPGYT   30 (36)
T ss_pred             CCCCCCEEecCCCCeEeECCCCCc
Confidence            4765 8999999999999999998

>KOG0994|consensus

Probab=96.24  E-value=0.016  Score=53.81  Aligned_cols=98  Identities=19%  Similarity=0.291  Sum_probs=60.6

Q ss_pred             CcccCCCCCCCCCCCCccccccCCCCCCCCCCCCccCCC-----CCCC--CCCeee---e-CCCceEe-eCCCCCccCCC
Q psy11800         20 PAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYEN-----PLIC--LNGRCD---N-TLGSYRC-ACQPGYSPSPD   87 (220)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~C~~i~~C~~~-----~~~C--~~~~C~---~-~~g~~~C-~C~~g~~~~~~   87 (220)
                      -|.|.++|.|..|..|-.++-+.+..|.+|+- -+|..+     |..|  ..|.|.   . +.| -.| .|..||.+..-
T Consensus       935 vC~C~~GY~G~RCe~CA~~~fGnP~~GGtCq~-CeC~~NiD~~d~~aCD~~TG~CLkCL~hTeG-~hCe~Ck~Gf~GdA~ 1012 (1758)
T KOG0994|consen  935 VCHCQEGYSGSRCEICADNHFGNPSEGGTCQK-CECSNNIDLYDPGACDVATGACLKCLYHTEG-DHCEHCKDGFYGDAL 1012 (1758)
T ss_pred             eeecccCccccchhhhcccccCCcccCCcccc-ccccCCcCccCCCccchhhchhhhhhhcccc-cchhhccccchhHHH
Confidence            47788999999999999999988888888853 233322     2234  124332   1 222 234 58899986432


Q ss_pred             CCCccC--------CCcccCCCCCCccccccccccccccc
Q psy11800         88 GGFCVD--------RDECRTPGDHDECSQKKKKKKKKKKL  119 (220)
Q Consensus        88 ~~~C~~--------~~~C~~~~~~~~C~c~~~~~~~~~~~  119 (220)
                      .+.|+.        ...|.-....++|.|.+.-.|.+|.+
T Consensus      1013 ~q~CqrC~Cn~LGTn~~~~CDr~tGQCpClpNv~G~~CDq 1052 (1758)
T KOG0994|consen 1013 RQNCQRCVCNFLGTNSTCHCDRFTGQCPCLPNVQGVRCDQ 1052 (1758)
T ss_pred             HhhhhhheccccccCCccccccccCcCCCCcccccccccc
Confidence            333321        11233334567888888888887754

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=96.15  E-value=0.0086  Score=46.56  Aligned_cols=45  Identities=33%  Similarity=0.538  Sum_probs=36.5

Q ss_pred             CCCCCCCCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCC
Q psy11800         44 SLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGG   89 (220)
Q Consensus        44 ~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~   89 (220)
                      ..+..|.++++|...++.|. ..|.++.|+|.|.|..||++..+++
T Consensus       179 l~~~~C~~~~~C~~~~~~c~-~~C~~~~g~~~c~c~~g~~~~~~~~  223 (224)
T cd01475         179 FQGKICVVPDLCATLSHVCQ-QVCISTPGSYLCACTEGYALLEDNK  223 (224)
T ss_pred             cccccCcCchhhcCCCCCcc-ceEEcCCCCEEeECCCCccCCCCCC
Confidence            34677989999987776675 4899999999999999999765543

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.05  E-value=0.014  Score=30.62  Aligned_cols=23  Identities=61%  Similarity=1.360  Sum_probs=20.5

Q ss_pred             C-CCCeeeeCCCceEeeCCCCCcc
Q psy11800         62 C-LNGRCDNTLGSYRCACQPGYSP   84 (220)
Q Consensus        62 C-~~~~C~~~~g~~~C~C~~g~~~   84 (220)
                      | .++.|++..+.|.|.|+.||.+
T Consensus         8 C~~~~~C~~~~~~~~C~C~~g~~g   31 (36)
T cd00053           8 CSNGGTCVNTPGSYRCVCPPGYTG   31 (36)
T ss_pred             CCCCCEEecCCCCeEeECCCCCcc
Confidence            7 5589999999999999999985

>smart00181 EGF Epidermal growth factor-like domain

Probab=95.73  E-value=0.023  Score=30.02  Aligned_cols=23  Identities=61%  Similarity=1.353  Sum_probs=19.5

Q ss_pred             CCCCeeeeCCCceEeeCCCCCcc
Q psy11800         62 CLNGRCDNTLGSYRCACQPGYSP   84 (220)
Q Consensus        62 C~~~~C~~~~g~~~C~C~~g~~~   84 (220)
                      |.++.|++..++|.|.|++||.+
T Consensus         8 C~~~~C~~~~~~~~C~C~~g~~g   30 (35)
T smart00181        8 CSNGTCINTPGSYTCSCPPGYTG   30 (35)
T ss_pred             CCCCEEECCCCCeEeECCCCCcc
Confidence            73339999999999999999985

>KOG1226|consensus

Probab=95.40  E-value=0.2  Score=45.00  Aligned_cols=83  Identities=35%  Similarity=0.842  Sum_probs=49.6

Q ss_pred             Cccccccccc----cccccccccccCCC--CCC-CCceEecCCCCeEeecCCCcEeCCCCCce---eecCcCCCCC-CCC
Q psy11800        104 DECSQKKKKK----KKKKKLYHDECSQN--GMC-ANGMCINMDGSFKCQCKPGFVLSPTGHAC---IDVDECYENP-LIC  172 (220)
Q Consensus       104 ~~C~c~~~~~----~~~~~~~~~~C~~~--~~c-~~~~C~~~~~~~~C~C~~G~~~~~~g~~C---~~i~~C~~~~-~~C  172 (220)
                      ++|.|.....    |++|+.+.-.|..+  ..| .+|.|.-.    +|.|.+||    .|..|   .+.+.|.+.. ..|
T Consensus       525 GqC~C~~~~~~~i~G~fCECDnfsC~r~~g~lC~g~G~C~CG----~CvC~~Gw----tG~~C~C~~std~C~~~~G~iC  596 (783)
T KOG1226|consen  525 GQCVCHKPDNGKIYGKFCECDNFSCERHKGVLCGGHGRCECG----RCVCNPGW----TGSACNCPLSTDTCESSDGQIC  596 (783)
T ss_pred             CceEecCCCCCceeeeeeeccCcccccccCcccCCCCeEeCC----cEEcCCCC----ccCCCCCCCCCccccCCCCcee
Confidence            3566655444    88888765556543  234 35666544    79999999    77777   4556665432 245


Q ss_pred             CC-CeEecCCCCeEEeCCCC-CccCCCCCCCC
Q psy11800        173 LN-GRCDNTLGSYRCACQPG-YSPSPDGGFCV  202 (220)
Q Consensus       173 ~~-~~C~~~~~~~~C~C~~G-~~~~~~g~~C~  202 (220)
                      .. |+|.=.    +|+|... |.    |.+|+
T Consensus       597 SGrG~C~Cg----~C~C~~~~~s----G~~CE  620 (783)
T KOG1226|consen  597 SGRGTCECG----RCKCTDPPYS----GEFCE  620 (783)
T ss_pred             CCCceeeCC----ceEcCCCCcC----cchhh
Confidence            42 555422    3677655 76    77775

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=95.02  E-value=0.022  Score=42.30  Aligned_cols=67  Identities=34%  Similarity=0.810  Sum_probs=45.7

Q ss_pred             CCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCC---CCCCCCC-CeEecCC-----CCeEEeCCCCCccC
Q psy11800        128 GMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYE---NPLICLN-GRCDNTL-----GSYRCACQPGYSPS  195 (220)
Q Consensus       128 ~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~---~~~~C~~-~~C~~~~-----~~~~C~C~~G~~~~  195 (220)
                      ..|.+|..+.....|.|.|.+||.+. .-.+|+...+|..   ....|.. +.|++..     ..|.|.|.+||.+.
T Consensus         6 T~CKNG~LiQMSNHfEC~Cnegfvl~-~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~   81 (197)
T PF06247_consen    6 TICKNGYLIQMSNHFECKCNEGFVLK-NENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILK   81 (197)
T ss_dssp             ---BTEEEEEESSEEEEEESTTEEEE-ETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEES
T ss_pred             ccccCCEEEEccCceEEEcCCCcEEc-cccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCceee
Confidence            45678888888889999999999876 5678877777764   1234665 7898765     57999999999864

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=93.31  E-value=0.041  Score=22.49  Aligned_cols=13  Identities=46%  Similarity=1.423  Sum_probs=9.7

Q ss_pred             EEeCCCCCccCCCCCCC
Q psy11800        185 RCACQPGYSPSPDGGFC  201 (220)
Q Consensus       185 ~C~C~~G~~~~~~g~~C  201 (220)
                      .|.|++||+    |.+|
T Consensus         1 ~C~C~~G~~----G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWT----GPNC   13 (13)
T ss_dssp             EEEE-TTEE----TTTT
T ss_pred             CccCcCCCc----CCCC
Confidence            489999998    7765

>KOG1226|consensus

Probab=92.11  E-value=1.4  Score=39.94  Aligned_cols=48  Identities=21%  Similarity=0.591  Sum_probs=30.0

Q ss_pred             Ccccccccccccccccc--ccccCCC--CCCC-CceEecCCCCeEeecCCC-cEeCCCCCce
Q psy11800        104 DECSQKKKKKKKKKKLY--HDECSQN--GMCA-NGMCINMDGSFKCQCKPG-FVLSPTGHAC  159 (220)
Q Consensus       104 ~~C~c~~~~~~~~~~~~--~~~C~~~--~~c~-~~~C~~~~~~~~C~C~~G-~~~~~~g~~C  159 (220)
                      +.|.|.+||+|.+|...  .+.|...  ..|. .|+|.-.    +|+|... |    .|..|
T Consensus       566 G~CvC~~GwtG~~C~C~~std~C~~~~G~iCSGrG~C~Cg----~C~C~~~~~----sG~~C  619 (783)
T KOG1226|consen  566 GRCVCNPGWTGSACNCPLSTDTCESSDGQICSGRGTCECG----RCKCTDPPY----SGEFC  619 (783)
T ss_pred             CcEEcCCCCccCCCCCCCCCccccCCCCceeCCCceeeCC----ceEcCCCCc----Ccchh
Confidence            57889999999988753  3455432  2233 2445433    5777655 7    66676

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=91.98  E-value=0.37  Score=25.09  Aligned_cols=25  Identities=44%  Similarity=1.104  Sum_probs=19.0

Q ss_pred             CCCC-CeEecCCCCeEEeCCCCCccCCCCCCC
Q psy11800        171 ICLN-GRCDNTLGSYRCACQPGYSPSPDGGFC  201 (220)
Q Consensus       171 ~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C  201 (220)
                      .|.+ |+|+..  ..+|.|.+||.    |..|
T Consensus         7 ~C~~~G~C~~~--~g~C~C~~g~~----G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSP--CGRCVCDSGYT----GPDC   32 (32)
T ss_pred             ccCCCCEEeCC--CCEEECCCCCc----CCCC
Confidence            4764 899876  34799999998    6654

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG0994|consensus

Probab=91.93  E-value=0.48  Score=44.71  Aligned_cols=99  Identities=18%  Similarity=0.258  Sum_probs=53.0

Q ss_pred             hcCCCCcccCCCCCCCCCCCCccccccCCCCCCCCC---CCCccCCCCCCCCCCeee---eCCCceEe-eCCCCCccCCC
Q psy11800         15 WASAGPAVVHSTYTGLSETQTYTGLSDSLSLGVSDL---NVDECYENPLICLNGRCD---NTLGSYRC-ACQPGYSPSPD   87 (220)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~C~---~i~~C~~~~~~C~~~~C~---~~~g~~~C-~C~~g~~~~~~   87 (220)
                      ...+|-|.|.++-.|-.|.+|-.|+.+.+.=. .|+   ..++|....     |.|+   +.-.++.| .|..||.+.+.
T Consensus       826 d~~tGQC~C~~g~ygrqCnqCqpG~WgFPeCr-~CqCNgHA~~Cd~~t-----GaCi~CqD~T~G~~CdrCl~GyyGdP~  899 (1758)
T KOG0994|consen  826 DKITGQCQCRPGTYGRQCNQCQPGYWGFPECR-PCQCNGHADTCDPIT-----GACIDCQDSTTGHSCDRCLDGYYGDPR  899 (1758)
T ss_pred             cccccceeeccccchhhccccCCCccCCCcCc-cccccCcccccCccc-----cccccccccccccchhhhhccccCCcc
Confidence            34567788888777777777766665322211 111   123333322     4444   44566777 59999987532


Q ss_pred             ---CCCccC-----C--------CcccCC--CCCCccccccccccccccc
Q psy11800         88 ---GGFCVD-----R--------DECRTP--GDHDECSQKKKKKKKKKKL  119 (220)
Q Consensus        88 ---~~~C~~-----~--------~~C~~~--~~~~~C~c~~~~~~~~~~~  119 (220)
                         +..|..     .        +.|...  ...-.|.|..||+|.+|+.
T Consensus       900 lg~g~~CrPCpCP~gp~Sg~~~A~sC~~d~~t~~ivC~C~~GY~G~RCe~  949 (1758)
T KOG0994|consen  900 LGSGIGCRPCPCPDGPASGRQHADSCYLDTRTQQIVCHCQEGYSGSRCEI  949 (1758)
T ss_pred             cCCCCCCCCCCCCCCCccchhccccccccccccceeeecccCccccchhh
Confidence               223321     0        111111  1223588888888888764

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=89.35  E-value=0.38  Score=33.47  Aligned_cols=42  Identities=26%  Similarity=0.553  Sum_probs=29.8

Q ss_pred             ecCcCCCC-CCCCCCCeEecCC--CCeEEeCCCCCccCCCCCCCCcCCC
Q psy11800        161 DVDECYEN-PLICLNGRCDNTL--GSYRCACQPGYSPSPDGGFCVDRDE  206 (220)
Q Consensus       161 ~i~~C~~~-~~~C~~~~C~~~~--~~~~C~C~~G~~~~~~g~~C~~~~~  206 (220)
                      ++.+|.+. .+.|.||.|....  ..+.|.|..||.    |..|+..+.
T Consensus        41 ~i~~Cp~ey~~YClHG~C~yI~dl~~~~CrC~~GYt----GeRCEh~dL   85 (139)
T PHA03099         41 AIRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYT----GIRCQHVVL   85 (139)
T ss_pred             ccccCChhhCCEeECCEEEeeccCCCceeECCCCcc----cccccceee
Confidence            34455422 3457778887654  678999999999    999986654

>PHA02887 EGF-like protein; Provisional

Probab=85.04  E-value=1.1  Score=30.69  Aligned_cols=39  Identities=31%  Similarity=0.800  Sum_probs=27.7

Q ss_pred             cCcCCCC-CCCCCCCeEecCC--CCeEEeCCCCCccCCCCCCCCcC
Q psy11800        162 VDECYEN-PLICLNGRCDNTL--GSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       162 i~~C~~~-~~~C~~~~C~~~~--~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      +.+|.+. .+.|.||.|....  ....|.|..||.    |..|+..
T Consensus        83 f~pC~~eyk~YCiHG~C~yI~dL~epsCrC~~GYt----G~RCE~v  124 (126)
T PHA02887         83 FEKCKNDFNDFCINGECMNIIDLDEKFCICNKGYT----GIRCDEV  124 (126)
T ss_pred             ccccChHhhCEeeCCEEEccccCCCceeECCCCcc----cCCCCcc
Confidence            3455432 3347788887654  568899999999    8889754

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=83.31  E-value=0.95  Score=24.34  Aligned_cols=23  Identities=39%  Similarity=0.781  Sum_probs=18.6

Q ss_pred             C-CCCeeeeCC-CceEeeCCCCCcc
Q psy11800         62 C-LNGRCDNTL-GSYRCACQPGYSP   84 (220)
Q Consensus        62 C-~~~~C~~~~-g~~~C~C~~g~~~   84 (220)
                      | .|+.|++.. |++.|.|..||+.
T Consensus         7 cP~NA~C~~~~dG~eecrCllgyk~   31 (37)
T PF12946_consen    7 CPANAGCFRYDDGSEECRCLLGYKK   31 (37)
T ss_dssp             --TTEEEEEETTSEEEEEE-TTEEE
T ss_pred             CCCCcccEEcCCCCEEEEeeCCccc
Confidence            6 678999887 9999999999985

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	220
1emn_A	82	Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epide		3e-12
1lmj_A	86	Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2		1e-11
1uzj_A	162	Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Hu		1e-07
1uzk_A	162	Integrin Binding Cbegf22-tb4-cbegf33 Fragment Of Hu		1e-07
2vj3_A	135	Human Notch-1 Egfs 11-13 Length = 135		3e-06
3v65_B	386	Crystal Structure Of Agrin And Lrp4 Complex Length		4e-06
2w86_A	147	Crystal Structure Of Fibrillin-1 Domains Cbegf9hyb2		4e-06
1toz_A	116	Nmr Structure Of The Human Notch-1 Ligand Binding R		5e-06
2bo2_A	143	Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune Syst		4e-05
1z6c_A	87	Solution Structure Of An Egf Pair (Egf34) From Vita		1e-04

>pdb|1EMN|A Chain A, Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epidermal Growth Factor-Like Domains, Minimized Average Structure Length = 82

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC-YENPLICLNGRCDNT 180
           DEC +  +C +G CIN DGS++C+C  G++L+  G+ C+D DEC   NP  C NG C N 
Sbjct: 6   DECKEPDVCKHGQCINTDGSYRCECPFGYILA--GNECVDTDECSVGNP--CGNGTCKNV 61
Query: 181 LGSYRCACQPGYSPSP 196
           +G + C C+ G+ P P
Sbjct: 62  IGGFECTCEEGFEPGP 77

>pdb|1LMJ|A Chain A, Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2+ Binding Epidermal Growth Factor-like Domains Length = 86

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 122 DECSQN-GMCANGMCINMDGSFKCQC----KPGFVLSPTGHACIDVDECYENPLICLNGR 176
           DEC  +  +C  G C+N  G F+C+C    + GF++      C+D+DEC  +PL+C  G 
Sbjct: 4   DECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKN---CMDIDECQRDPLLCRGGV 60
Query: 177 CDNTLGSYRCACQPGYSPSPDGGFCV 202
           C NT GSYRC C PG+  SP+   C+
Sbjct: 61  CHNTEGSYRCECPPGHQLSPNISACI 86

>pdb|1UZJ|A Chain A, Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Human Fibrillin-1, Holo Form. Length = 162

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 70/162 (43%), Gaps = 13/162 (8%)
Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRD------ECRTPGDHD 104
           +V+EC + P  C++G C NT GSY C C P +  +P    CVD        + R  GD+ 
Sbjct: 2   DVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG 60
Query: 105 E--CSQXXXXXXXXXXLYHDECSQNGMCANGMCINMDGS---FKCQCKPGFVLSPTGHAC 159
           +  CS                    G     MC  ++ S     C    GF  +P     
Sbjct: 61  DTACSNEIGVGVSKASCCCSLGKAWGTPCE-MCPAVNTSEYKILCPGGEGFRPNPITVIL 119
Query: 160 IDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC 201
            D+DEC E P +C  G+C NT GS++C C  GY  + D   C
Sbjct: 120 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 161

>pdb|1UZK|A Chain A, Integrin Binding Cbegf22-tb4-cbegf33 Fragment Of Human Fibrillin-1, Ca Bound To Cbegf23 Domain Only Length = 162

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 69/161 (42%), Gaps = 11/161 (6%)
Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRD------ECRTPGDHD 104
           +V+EC + P  C++G C NT GSY C C P +  +P    CVD        + R  GD+ 
Sbjct: 2   DVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG 60
Query: 105 E--CSQXXXXXXXXXXLYHDECSQNGM-CANGMCINM-DGSFKCQCKPGFVLSPTGHACI 160
           +  CS                    G  C     +N  +    C    GF  +P      
Sbjct: 61  DTACSNEIGVGVSKASCCCSLGKAWGTPCEXCPAVNTSEYKILCPGGEGFRPNPITVILE 120
Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC 201
           D+DEC E P +C  G+C NT GS++C C  GY  + D   C
Sbjct: 121 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 161

>pdb|2VJ3|A Chain A, Human Notch-1 Egfs 11-13 Length = 135

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 13/80 (16%)
Query: 133 GMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLN-GRCDNTLGSYRCACQP 190
           G CIN  GSF+CQC  G+    TG  C IDV+EC  NP  C N   C + +G ++C C P
Sbjct: 19  GKCINTLGSFECQCLQGY----TGPRCEIDVNECVSNP--CQNDATCLDQIGEFQCICMP 72
Query: 191 GYSPSPDGGFC-VDRDECRT 209
           GY    +G  C V+ DEC +
Sbjct: 73  GY----EGVHCEVNTDECAS 88

>pdb|3V65|B Chain B, Crystal Structure Of Agrin And Lrp4 Complex Length = 386

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 127 NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRC 186
           NG CA   C  + G+ +C C  G+ L+  G  C DV+EC E    C  G C N+ G+++C
Sbjct: 10  NGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGY-CSQG-CTNSEGAFQC 66
Query: 187 ACQPGYSPSPDGGFC 201
            C+ GY   PD   C
Sbjct: 67  WCEAGYELRPDRRSC 81

>pdb|2W86|A Chain A, Crystal Structure Of Fibrillin-1 Domains Cbegf9hyb2cbegf10, Calcium Saturated Form Length = 147

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 56/147 (38%), Gaps = 39/147 (26%)
Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-------------RDEC 97
           ++DEC  +P  C+NG C N+ GS+ C C    +  P    C++             R E 
Sbjct: 3   DIDECESSP--CINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEI 60
Query: 98  RTPGDHDE---CSQXXXXXXXXXXLYH--------------------DECSQN-GMCANG 133
              G   +   CS           L                      DEC    G+C NG
Sbjct: 61  NINGATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNG 120
Query: 134 MCINMDGSFKCQCKPGFVLSPTGHACI 160
           +C+N  GSFKCQC  G  L  TG  C+
Sbjct: 121 LCVNTRGSFKCQCPSGMTLDATGRICL 147

>pdb|1TOZ|A Chain A, Nmr Structure Of The Human Notch-1 Ligand Binding Region Length = 116

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 13/80 (16%)
Query: 133 GMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLN-GRCDNTLGSYRCACQP 190
           G CIN  GSF+CQC  G+    TG  C IDV+EC  NP  C N   C + +G ++C C P
Sbjct: 17  GKCINTLGSFECQCLQGY----TGPRCEIDVNECVSNP--CQNDATCLDQIGEFQCICMP 70
Query: 191 GYSPSPDGGFC-VDRDECRT 209
           GY    +G  C V+ DEC +
Sbjct: 71  GY----EGVHCEVNTDECAS 86

>pdb|2BO2|A Chain A, Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune System Molecule, In Complex With Calcium. Length = 143

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 135 CINMDGSFKCQCKPGF--------VLSPTGHACIDVDECYENPLICLNGR-CDNTLGSYR 185
           C N +GS+ C C PG+          + + + C DVDEC      C +   C NT+GSY 
Sbjct: 61  CWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYS 120
Query: 186 CACQPGYSP 194
           C C+PG+ P
Sbjct: 121 CRCRPGWKP 129

>pdb|1Z6C|A Chain A, Solution Structure Of An Egf Pair (Egf34) From Vitamin K- Dependent Protein S Length = 87

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 122 DECS-QNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNT 180
           DECS +  +C   +C N+ G F+C+C  G+  +    +C D+DEC EN    L   C N 
Sbjct: 4   DECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCAQL---CVNY 60
Query: 181 LGSYRCAC--QPGYSPSPDGGFC 201
            G Y C C  + G+  + D   C
Sbjct: 61  PGGYTCYCDGKKGFKLAQDQKSC 83

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	220
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	1e-37
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-21
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	6e-10
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	6e-33
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	6e-16
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	3e-10
2bou_A	143	EGF-like module containing mucin-like hormone rece	2e-26
2bou_A	143	EGF-like module containing mucin-like hormone rece	3e-16
2bou_A	143	EGF-like module containing mucin-like hormone rece	6e-04
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	2e-26
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	2e-22
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	2e-12
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	8e-24
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	2e-20
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	6e-14
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	6e-23
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	2e-17
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	3e-12
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	9e-23
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	5e-17
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	2e-20
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	1e-12
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	2e-05
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	2e-19
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	4e-13
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	9e-06
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	7e-16
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	1e-08
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	1e-15
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	4e-04
1aut_L	114	Activated protein C; serine proteinase, plasma cal	8e-14
1aut_L	114	Activated protein C; serine proteinase, plasma cal	8e-10
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	1e-13
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	1e-05
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	1e-04
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	2e-12
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	3e-05
3v65_B	386	Low-density lipoprotein receptor-related protein;	2e-12
3v65_B	386	Low-density lipoprotein receptor-related protein;	1e-10
3v65_B	386	Low-density lipoprotein receptor-related protein;	1e-06
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	8e-12
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	1e-10
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	2e-10
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	9e-09
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	8e-10
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	8e-10
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	5e-08
2vh0_B	134	Activated factor XA light chain; serine protease,	2e-09
2vh0_B	134	Activated factor XA light chain; serine protease,	8e-09
2vh0_B	134	Activated factor XA light chain; serine protease,	4e-06
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	2e-08
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	5e-04
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	9e-08
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	9e-06
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	3e-06
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	5e-05
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	6e-05
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	5e-06
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	4e-04
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	2e-05
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	2e-05
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	1e-04
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	3e-05
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	3e-04
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	8e-04
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	6e-05
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	4e-04
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	4e-04
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-04
1nzi_A	159	Complement C1S component; calcium, innate immunity	2e-04
1nzi_A	159	Complement C1S component; calcium, innate immunity	8e-04
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	2e-04
1szb_A	170	Mannose binding lectin-associated serine protease-	3e-04
1szb_A	170	Mannose binding lectin-associated serine protease-	7e-04

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score =  127 bits (322), Expect = 1e-37
 Identities = 44/160 (27%), Positives = 59/160 (36%), Gaps = 11/160 (6%)

Query: 52  VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHD------- 104
           V+EC  +P  C++G C NT GSY C C P +  +P    CVD        D         
Sbjct: 3   VNEC-LDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGD 61

Query: 105 ---ECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID 161
                       K        +               +    C    GF  +P      D
Sbjct: 62  TACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILED 121

Query: 162 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC 201
           +DEC E P +C  G+C NT GS++C C  GY  + D   C
Sbjct: 122 IDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 161

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 85.9 bits (213), Expect = 2e-21
 Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTL 181
           +EC     C +G C+N  GS+ C C P F L+PT   C+D           L+ R     
Sbjct: 4   NECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSG----NCYLDIRPRGDN 59

Query: 182 GSYRCACQPGYSPSPDGGFCVDRDECRTPGG 212
           G   C+ + G   S     C       TP  
Sbjct: 60  GDTACSNEIGVGVSKASCCCSLGKAWGTPCE 90

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 55.1 bits (133), Expect = 6e-10
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR 208
           DV+EC +    C++G C NT GSY C C P +  +P    CVD     
Sbjct: 2   DVNECLDPT-TCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGN 48

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score =  115 bits (289), Expect = 6e-33
 Identities = 41/151 (27%), Positives = 59/151 (39%), Gaps = 7/151 (4%)

Query: 52  VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKK 111
           +DEC  +P  C+NG C N+ GS+ C C    +  P    C++  +            + +
Sbjct: 4   IDECESSP--CINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCW--QTVIDGRCE 59

Query: 112 KKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLI 171
                  L    CS  G                 C  G+     G  C D+DEC   P +
Sbjct: 60  ININGATLKSQCCSSLGAAWG--SPCTLCQVDPICGKGYSRI-KGTQCEDIDECEVFPGV 116

Query: 172 CLNGRCDNTLGSYRCACQPGYSPSPDGGFCV 202
           C NG C NT GS++C C  G +    G  C+
Sbjct: 117 CKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 70.8 bits (174), Expect = 6e-16
 Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 26/114 (22%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCD--- 178
           DEC  +  C NG+C N  GSF C+C     L PT   CI+  +      +  +GRC+   
Sbjct: 5   DECESSP-CINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVI-DGRCEINI 62

Query: 179 --------------------NTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGG 212
                                TL      C  GYS    G  C D DEC    G
Sbjct: 63  NGATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYS-RIKGTQCEDIDECEVFPG 115

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 55.4 bits (134), Expect = 3e-10
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR 208
           D+DEC  +P  C+NG C N+ GS+ C C    +  P    C++  +  
Sbjct: 3   DIDECESSP--CINGVCKNSPGSFICECSSESTLDPTKTICIETIKGT 48

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 98.7 bits (246), Expect = 2e-26
 Identities = 39/171 (22%), Positives = 56/171 (32%), Gaps = 43/171 (25%)

Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSP-----SPDGGFCVDRDECRTPGDHDE 105
           +   C          +  + + +  C C PG+S      +     C D +EC T      
Sbjct: 1   DSRGCARW-----CPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVS- 54

Query: 106 CSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLS--------PTGH 157
                             C          C N +GS+ C C PG+            + +
Sbjct: 55  ------------------CG-----KFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESEN 91

Query: 158 ACIDVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 207
            C DVDEC      C  +  C NT+GSY C C+PG+ P            C
Sbjct: 92  TCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVC 142

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 71.4 bits (175), Expect = 3e-16
 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 21/104 (20%)

Query: 122 DECSQNGMC-ANGMCINMDGSFKCQCKPGF-----VLSPTGHACIDVDECYENPLIC--L 173
             C++   C  +  C+N   +  C+C PGF     +++     C D++EC     +    
Sbjct: 3   RGCARW--CPQDSSCVN---ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGK 57

Query: 174 NGRCDNTLGSYRCACQPGYSPS--------PDGGFCVDRDECRT 209
              C NT GSY C C PGY P              C D DEC +
Sbjct: 58  FSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSS 101

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 10/57 (17%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSP-----SPDGGFCVDRDECRTPGG 212
           D   C          +  + + +  C C PG+S      +     C D +EC T   
Sbjct: 1   DSRGCARW-----CPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSK 52

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 96.2 bits (240), Expect = 2e-26
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 122 DECS-QNGMCANGMCINMDGSFKCQCKPGFVLSPT-GHACIDVDECYENPLICLNGRCDN 179
           DEC     +C  G C+N  G F+C+C  G+         C+D+DEC  +PL+C  G C N
Sbjct: 4   DECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHN 63

Query: 180 TLGSYRCACQPGYSPSPDGGFCV 202
           T GSYRC C PG+  SP+   C+
Sbjct: 64  TEGSYRCECPPGHQLSPNISACI 86

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 86.2 bits (214), Expect = 2e-22
 Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 27/110 (24%)

Query: 52  VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSP-DGGFCVDRDECRTPGDHDECSQKK 110
           +DEC  +P +C  G+C NT G + C C  GY         C+D DEC+            
Sbjct: 3   IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRD---------- 52

Query: 111 KKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACI 160
                             +C  G+C N +GS++C+C PG  LSP   ACI
Sbjct: 53  ----------------PLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 60.0 bits (146), Expect = 2e-12
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSP-DGGFCVDRDECRTPGG 212
           D+DEC  +P +C  G+C NT G + C C  GY         C+D DEC+    
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPL 54

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 89.6 bits (223), Expect = 8e-24
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 122 DECSQ-NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNT 180
           DECS    +C   +C N+ G F+C+C  G+  +    +C D+DEC EN   C    C N 
Sbjct: 4   DECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENM--C-AQLCVNY 60

Query: 181 LGSYRCAC--QPGYSPSPDGGFCVD 203
            G Y C C  + G+  + D   C  
Sbjct: 61  PGGYTCYCDGKKGFKLAQDQKSCEV 85

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 81.2 bits (201), Expect = 2e-20
 Identities = 32/113 (28%), Positives = 41/113 (36%), Gaps = 31/113 (27%)

Query: 52  VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKK 111
           VDEC   P IC    C N  G + C C  GY  +     C D DEC      + C+Q   
Sbjct: 3   VDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSE----NMCAQ--- 55

Query: 112 KKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQC--KPGFVLSPTGHACIDV 162
                                 +C+N  G + C C  K GF L+    +C  V
Sbjct: 56  ----------------------LCVNYPGGYTCYCDGKKGFKLAQDQKSCEVV 86

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 63.8 bits (156), Expect = 6e-14
 Identities = 20/49 (40%), Positives = 22/49 (44%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT 209
           DVDEC   P IC    C N  G + C C  GY  +     C D DEC  
Sbjct: 2   DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSE 50

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 87.3 bits (217), Expect = 6e-23
 Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 3/77 (3%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTL 181
           DEC +  +C +G CIN DGS++C+C  G++L   G+ C+D DEC      C NG C N +
Sbjct: 6   DECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDECSVGN-PCGNGTCKNVI 62

Query: 182 GSYRCACQPGYSPSPDG 198
           G + C C+ G+ P P  
Sbjct: 63  GGFECTCEEGFEPGPMM 79

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 72.6 bits (179), Expect = 2e-17
 Identities = 37/106 (34%), Positives = 45/106 (42%), Gaps = 30/106 (28%)

Query: 52  VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKK 111
           +DEC + P +C +G+C NT GSYRC C  GY     G  CVD DEC              
Sbjct: 5   MDEC-KEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDEC-------------- 47

Query: 112 KKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGH 157
                        S    C NG C N+ G F+C C+ GF   P   
Sbjct: 48  -------------SVGNPCGNGTCKNVIGGFECTCEEGFEPGPMMT 80

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 158 ACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGG 212
           + +D+DEC + P +C +G+C NT GSYRC C  GY     G  CVD DEC     
Sbjct: 1   SAVDMDEC-KEPDVCKHGQCINTDGSYRCECPFGY--ILAGNECVDTDECSVGNP 52

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 87.8 bits (218), Expect = 9e-23
 Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 34/138 (24%)

Query: 64  NGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDE 123
           +    + +  Y                 +  +EC                          
Sbjct: 3   HHHHHHPMSDYDIPTTENL----YFQGAMGTNECLD------------------------ 34

Query: 124 CSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGS 183
              NG C + +C ++   ++C C  GF L      C D+DEC ++P  C +  C N  G 
Sbjct: 35  --NNGGC-SYVCNDLKIGYECLCPDGFQLVAQRR-CEDIDEC-QDPDTC-SQLCVNLEGG 88

Query: 184 YRCACQPGYSPSPDGGFC 201
           Y+C C+ G+   P    C
Sbjct: 89  YKCQCEEGFQLDPHTKAC 106

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 72.7 bits (179), Expect = 5e-17
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 132 NGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPG 191
           +    +    +                 +  +EC +N   C +  C++    Y C C  G
Sbjct: 3   HHHHHHPMSDYDIPTTENL----YFQGAMGTNECLDNNGGC-SYVCNDLKIGYECLCPDG 57

Query: 192 YSPSPDGGFCVDRDECRTPGG 212
           +        C D DEC+ P  
Sbjct: 58  FQLVAQRR-CEDIDECQDPDT 77

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 81.6 bits (202), Expect = 2e-20
 Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 36/148 (24%)

Query: 52  VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKK 111
           VD C+     C          SY C C  G++P P      +   C+   +   C     
Sbjct: 4   VDPCFRAN--CEYQCQPLDQTSYLCVCAEGFAPIPH-----EPHRCQMFCNQTACPA--- 53

Query: 112 KKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLI 171
                                    + +    C+C  G++L   G  C D+DEC EN   
Sbjct: 54  -----------------------DCDPNTQASCECPEGYILDD-GFICTDIDEC-ENGGF 88

Query: 172 CLNGRCDNTLGSYRCACQPGYSPSPDGG 199
           C +G C N  G++ C C P  + +   G
Sbjct: 89  C-SGVCHNLPGTFECICGPDSALAGQIG 115

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 61.6 bits (150), Expect = 1e-12
 Identities = 25/92 (27%), Positives = 28/92 (30%), Gaps = 9/92 (9%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT-GHACIDVDECYENPLICLNGRCDNT 180
           D C +   C          S+ C C  GF   P   H C         P  C      + 
Sbjct: 5   DPCFRAN-CEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC------DP 57

Query: 181 LGSYRCACQPGYSPSPDGGFCVDRDECRTPGG 212
                C C  GY    DG  C D DEC   G 
Sbjct: 58  NTQASCECPEGYILD-DGFICTDIDECENGGF 88

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 12/48 (25%), Positives = 15/48 (31%), Gaps = 3/48 (6%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGF-CVDRDEC 207
            VD C+     C          SY C C  G++P P     C      
Sbjct: 3   PVDPCFRAN--CEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQ 48

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 80.0 bits (198), Expect = 2e-19
 Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 46/162 (28%)

Query: 51  NVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQK 109
           +VDEC      C + G+C NTLGS+ C C  GY+    G  C          + D     
Sbjct: 4   DVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRC----------EID----- 44

Query: 110 KKKKKKKKKLYHDECSQNGMCANG-MCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYE 167
                       +EC  N  C N   C++  G F+C C PG+     G  C ++ DEC  
Sbjct: 45  -----------VNECVSN-PCQNDATCLDQIGEFQCICMPGY----EGVHCEVNTDECAS 88

Query: 168 NPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFC-VDRDEC 207
           +P  CL+ GRC + +  ++C C  G++    G  C VD    
Sbjct: 89  SP--CLHNGRCLDKINEFQCECPTGFT----GHLCQVDLHHI 124

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 63.0 bits (154), Expect = 4e-13
 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 42/132 (31%)

Query: 49  DLNVDECYENPLICLNG-RCDNTLGSYRCACQPGYSPSPDGGFC-VDRDECRTPGDHDEC 106
           +++V+EC  NP  C N   C + +G ++C C PGY     G  C V+ DEC         
Sbjct: 42  EIDVNECVSNP--CQNDATCLDQIGEFQCICMPGYE----GVHCEVNTDEC--------- 86

Query: 107 SQKKKKKKKKKKLYHDECSQNGMCAN-GMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDE 164
                               +  C + G C++    F+C+C  GF    TGH C +D+  
Sbjct: 87  -------------------ASSPCLHNGRCLDKINEFQCECPTGF----TGHLCQVDLHH 123

Query: 165 CYENPLICLNGR 176
             +   +  N R
Sbjct: 124 ILDAQKMVWNHR 135

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 43.0 bits (102), Expect = 9e-06
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 6/52 (11%)

Query: 158 ACIDVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFC-VDRDEC 207
           +  DVDEC      C + G+C NTLGS+ C C  GY+    G  C +D +EC
Sbjct: 1   SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCEIDVNEC 48

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 72.0 bits (175), Expect = 7e-16
 Identities = 28/173 (16%), Positives = 43/173 (24%), Gaps = 27/173 (15%)

Query: 61  ICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKK--------- 111
           IC NG+       + C C  G         C + +EC        C +  +         
Sbjct: 12  ICXNGQLVQMSNHFXCMCNEGLVHL-SENTCEEXNECXXETLGXACGEFGQCIENPDPAQ 70

Query: 112 ---------------KKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTG 156
                          +      +                ++   S  C C  G V +P  
Sbjct: 71  VNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPED 130

Query: 157 HA-CIDVDECYENPLICL-NGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 207
              C    E          N  C N  G Y C C  G++   +   C+     
Sbjct: 131 EXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCLGPHHH 183

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 52.3 bits (124), Expect = 1e-08
 Identities = 18/136 (13%), Positives = 34/136 (25%), Gaps = 18/136 (13%)

Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQ-- 108
            +         C+       +  Y C C  GY+   D                +   +  
Sbjct: 51  TLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYL 110

Query: 109 ----------------KKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVL 152
                             + +          C       N +C N++G + CQC  GF  
Sbjct: 111 SEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTF 170

Query: 153 SPTGHACIDVDECYEN 168
               + C+     + +
Sbjct: 171 DXEXNVCLGPHHHHHH 186

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 70.1 bits (172), Expect = 1e-15
 Identities = 38/167 (22%), Positives = 55/167 (32%), Gaps = 41/167 (24%)

Query: 53  DECYENPLICLN-GRCDNTL--GSYRCACQPGYSPSPDGGFC-VDRDEC---RTPGDHDE 105
           D C  NP  C N G C   L  GS+ C C  G++       C    +       P     
Sbjct: 1   DICDPNP--CENGGICLPGLADGSFSCECPDGFT----DPNCSSVVEVASDEEEPTSAGP 54

Query: 106 CSQKKKKKKKKKKLYHDECSQNGMC--ANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDV 162
           C+              + C   G C  +     +    + C+C  GF     G  C  ++
Sbjct: 55  CTP-------------NPCHNGGTCEISEAYRGDTFIGYVCKCPRGF----NGIHCQHNI 97

Query: 163 DECYENPLICLNG-RCDNTLGSYRCACQPGYSPSPDGGFC-VDRDEC 207
           +EC   P  C NG  C + + +Y C C   +     G  C       
Sbjct: 98  NECEVEP--CKNGGICTDLVANYSCECPGEFM----GRNCQYKGGGH 138

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 8/51 (15%)

Query: 49  DLNVDECYENPLICLNG-RCDNTLGSYRCACQPGYSPSPDGGFC-VDRDEC 97
             N++EC   P  C NG  C + + +Y C C   +     G  C       
Sbjct: 94  QHNINECEVEP--CKNGGICTDLVANYSCECPGEFM----GRNCQYKGGGH 138

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 64.3 bits (157), Expect = 8e-14
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 2/86 (2%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTL 181
           +    +  C +G CI+  GSF C C+ G+         +    C  +   C    C   +
Sbjct: 15  EHPCASLCCGHGTCIDGIGSFSCDCRSGWEG-RFCQREVSFLNCSLDNGGC-THYCLEEV 72

Query: 182 GSYRCACQPGYSPSPDGGFCVDRDEC 207
           G  RC+C PGY    D   C    + 
Sbjct: 73  GWRRCSCAPGYKLGDDLLQCHPAVKF 98

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 53.6 bits (129), Expect = 8e-10
 Identities = 22/118 (18%), Positives = 35/118 (29%), Gaps = 29/118 (24%)

Query: 48  SDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECS 107
             L ++    +   C +G C + +GS+ C C+ G+         V    C          
Sbjct: 10  LVLPLEHPCASL-CCGHGTCIDGIGSFSCDCRSGWE-GRFCQREVSFLNCS--------- 58

Query: 108 QKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165
                              NG C    C+   G  +C C PG+ L      C    + 
Sbjct: 59  -----------------LDNGGC-THYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 98

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 65.9 bits (161), Expect = 1e-13
 Identities = 29/162 (17%), Positives = 41/162 (25%), Gaps = 42/162 (25%)

Query: 49  DLNVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECS 107
             + D+C  +P  C N G+C + LG Y C C  G+                  G + E  
Sbjct: 39  YKDGDQCETSP--CQNQGKCKDGLGEYTCTCLEGFE-----------------GKNCELF 79

Query: 108 QKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECY 166
                           CS +    +  C     S  C C  G+    T            
Sbjct: 80  ------------TRKLCSLDNGDCDQFCHEEQNSVVCSCARGY----TLADNGKACIPTG 123

Query: 167 ENPLICLNGR-CDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 207
             P  C             +     G   +PD       D  
Sbjct: 124 PYP--CGKQTLERRKRSVAQATSSSGE--APDSITWKPYDAA 161

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 13/123 (10%), Positives = 23/123 (18%), Gaps = 35/123 (28%)

Query: 53  DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKK 112
             C  +   C +  C     S  C+C  GY+                    +  +     
Sbjct: 82  KLCSLDNGDC-DQFCHEEQNSVVCSCARGYT-----------------LADNGKAC---- 119

Query: 113 KKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLIC 172
                                +        +     G   +P        D    +P   
Sbjct: 120 ---------IPTGPYPCGKQTLERRKRSVAQATSSSGE--APDSITWKPYDAADLDP--T 166

Query: 173 LNG 175
            N 
Sbjct: 167 ENP 169

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 7/66 (10%)

Query: 130 CANGMCINMDG-SFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTLGSYRCA 187
           C    C   +                  +   D D+C  +P  C N G+C + LG Y C 
Sbjct: 12  CMEETCSYEEAREVFEDSDKTNE---FWNKYKDGDQCETSP--CQNQGKCKDGLGEYTCT 66

Query: 188 CQPGYS 193
           C  G+ 
Sbjct: 67  CLEGFE 72

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 64.9 bits (157), Expect = 2e-12
 Identities = 34/155 (21%), Positives = 48/155 (30%), Gaps = 30/155 (19%)

Query: 53  DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKK 112
           +EC +N   C +  C++    Y C C  G+        C D DEC+ P     CSQ    
Sbjct: 1   NECLDNNGGC-SHVCNDLKIGYECLCPDGFQLVAQR-RCEDIDECQDPD---TCSQL--- 52

Query: 113 KKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLIC 172
                                 C+N++G +KCQC+ GF L P   AC  V          
Sbjct: 53  ----------------------CVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTN 90

Query: 173 LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 207
            +     TL             +            
Sbjct: 91  RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNR 125

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 43.3 bits (101), Expect = 3e-05
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 163 DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGG 212
           +EC +N   C +  C++    Y C C  G+        C D DEC+ P  
Sbjct: 1   NECLDNNGGC-SHVCNDLKIGYECLCPDGFQLVAQR-RCEDIDECQDPDT 48

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 64.4 bits (156), Expect = 2e-12
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 122 DECSQ-NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNT 180
           + C+  NG CA   C  + G+ +C C  G+ L+  G  C DV+EC E      +  C N+
Sbjct: 4   ENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYC--SQGCTNS 60

Query: 181 LGSYRCACQPGYSPSPDGGFCVDRDEC 207
            G+++C C+ GY   PD   C      
Sbjct: 61  EGAFQCWCEAGYELRPDRRSCKALGPE 87

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 59.4 bits (143), Expect = 1e-10
 Identities = 29/145 (20%), Positives = 43/145 (29%), Gaps = 29/145 (20%)

Query: 52  VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKK 111
            + C  N   C   +C    G+ +C C  GY  + DG  C D +EC   G    CSQ   
Sbjct: 3   EENCNVNNGGC-AQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGY---CSQ--- 55

Query: 112 KKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLI 171
                                  C N +G+F+C C+ G+ L P   +C  +         
Sbjct: 56  ----------------------GCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFA 93

Query: 172 CLNGRCDNTLGSYRCACQPGYSPSP 196
                                  + 
Sbjct: 94  NRIDIRQVLPHRSEYTLLLNNLENA 118

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 47.5 bits (112), Expect = 1e-06
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGG 212
             + C  N   C   +C    G+ +C C  GY  + DG  C D +EC   G 
Sbjct: 2   GEENCNVNNGGC-AQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGY 52

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 59.7 bits (145), Expect = 8e-12
 Identities = 27/138 (19%), Positives = 39/138 (28%), Gaps = 40/138 (28%)

Query: 49  DLNVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECS 107
            ++ D+C  NP  CLN G C + + SY C CQ G+     G  C                
Sbjct: 45  YVDGDQCEPNP--CLNGGLCKDDINSYECWCQVGFE----GKNC---------------- 82

Query: 108 QKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECY 166
                     +L      +NG C        D    C C  G+                 
Sbjct: 83  ----------ELDATCNIKNGRCKQFCKTGADSKVLCSCTTGY----RLAPDQKSCKPAV 128

Query: 167 ENPLICLNGRCDNTLGSY 184
             P  C      ++  + 
Sbjct: 129 PFP--CGRVSVSHSPTTL 144

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 56.6 bits (137), Expect = 1e-10
 Identities = 19/88 (21%), Positives = 28/88 (31%), Gaps = 11/88 (12%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLNGRCDNT 180
           D+C  N     G+C +   S++C C+ GF     G  C +D     +N   C        
Sbjct: 49  DQCEPNPCLNGGLCKDDINSYECWCQVGF----EGKNCELDATCNIKNGR-CKQFCKTGA 103

Query: 181 LGSYRCACQPGYSPSPDGGFC-VDRDEC 207
                C+C  GY                
Sbjct: 104 DSKVLCSCTTGYR----LAPDQKSCKPA 127

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 55.8 bits (135), Expect = 2e-10
 Identities = 23/93 (24%), Positives = 30/93 (32%), Gaps = 17/93 (18%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLNGRC--- 177
           D+C+ +     G C +   S+ C C P F     G  C    D+         NG C   
Sbjct: 48  DQCASSPCQNGGSCKDQLQSYICFCLPAF----EGRNCETHKDDQLICV--NENGGCEQY 101

Query: 178 --DNTLGSYRCACQPGYSPSPDGGFC-VDRDEC 207
             D+T     C C  GYS         V     
Sbjct: 102 CSDHTGTKRSCRCHEGYS----LLADGVSCTPT 130

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 51.6 bits (124), Expect = 9e-09
 Identities = 26/130 (20%), Positives = 39/130 (30%), Gaps = 38/130 (29%)

Query: 51  NVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFC-VDRDECRTPGDHDECSQ 108
           + D+C  +P  C N G C + L SY C C P +     G  C   +D+            
Sbjct: 46  DGDQCASSP--CQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLI--------- 90

Query: 109 KKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYE 167
                            +NG C      +      C+C  G+    +  A  +      E
Sbjct: 91  -------------CVN-ENGGCEQYCSDHTGTKRSCRCHEGY----SLLADGVSCTPTVE 132

Query: 168 NPLICLNGRC 177
            P  C     
Sbjct: 133 YP--CGKIPI 140

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 56.9 bits (137), Expect = 8e-10
 Identities = 30/109 (27%), Positives = 38/109 (34%), Gaps = 20/109 (18%)

Query: 122 DECSQNGMCANGMCINM-DGSFKCQ-CKPGFVLSPTGHACIDVDECYENPLICLNG---- 175
           D C  N       C +  DGS+ C  C  GF     G  C D+DEC   P IC +     
Sbjct: 4   DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGF--LGNGTHCEDLDECALVPDICFSTSKVP 61

Query: 176 RCDNTLGSYRC-ACQPGYS-----------PSPDGGFCVDRDECRTPGG 212
           RC NT   + C  C P Y               +   C   + C+    
Sbjct: 62  RCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTH 110

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 56.9 bits (137), Expect = 8e-10
 Identities = 40/179 (22%), Positives = 53/179 (29%), Gaps = 47/179 (26%)

Query: 52  VDECYENPLICLNG-RCDNT-LGSYRC-ACQPGYSPSPDGGFCVDRDECRTPGDHDECSQ 108
            D C  NP  C  G +C +   GS+ C  C  G+    +G  C D DEC           
Sbjct: 3   PDGCLSNP--CFPGAQCSSFPDGSWSCGFCPVGFLG--NGTHCEDLDEC----------- 47

Query: 109 KKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKC-QCKPGFV-----------LSPTG 156
                     L  D C          C+N    F C  C P +                 
Sbjct: 48  ---------ALVPDICFSTSKVPR--CVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEK 96

Query: 157 HACIDVDECYENPLIC-LNGRCDN----TLGSYRCACQPGYSPSPDGGFCVDRDECRTP 210
             C   + C +    C  +  C      +   Y+C CQ GY+         D D    P
Sbjct: 97  QVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYA-GDGLICGEDSDLDGWP 154

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 51.6 bits (123), Expect = 5e-08
 Identities = 31/174 (17%), Positives = 53/174 (30%), Gaps = 20/174 (11%)

Query: 46  GVSDLNVDECYENPLICLNG----RCDNTLGSYRC-ACQPGYSPSPDGGFCVDRDEC--R 98
           G    ++DEC   P IC +     RC NT   + C  C P Y  +   G  ++  +   +
Sbjct: 38  GTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQ 97

Query: 99  TPGDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFV-LSPTGH 157
                + C  K              C ++  C   +    D  +KC+C+ G+        
Sbjct: 98  VCEPENPCKDKT-----------HNCHKHAECIY-LGHFSDPMYKCECQTGYAGDGLICG 145

Query: 158 ACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211
              D+D      L+C      + +               D     D  +     
Sbjct: 146 EDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDN 199

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 17/88 (19%), Positives = 26/88 (29%), Gaps = 10/88 (11%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLNGRCDNT 180
           D+C  +     G C +  G + C C  GF     G  C +   +         +  C   
Sbjct: 43  DQCETSPCQNQGKCKDGLGEYTCTCLEGF----EGKNCELFTRKLCSLDNGDCDQFCHEE 98

Query: 181 LGSYRCACQPGYSPSPDGGFC-VDRDEC 207
             S  C+C  GY+               
Sbjct: 99  QNSVVCSCARGYT----LADNGKACIPT 122

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 51.5 bits (124), Expect = 8e-09
 Identities = 28/130 (21%), Positives = 38/130 (29%), Gaps = 41/130 (31%)

Query: 49  DLNVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFC-VDRDECRTPGDHDEC 106
             + D+C  +P  C N G+C + LG Y C C  G+     G  C +   +         C
Sbjct: 39  YKDGDQCETSP--CQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKL--------C 84

Query: 107 SQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDEC 165
           S                   NG C +  C     S  C C  G+    T           
Sbjct: 85  S-----------------LDNGDC-DQFCHEEQNSVVCSCARGY----TLADNGKACIPT 122

Query: 166 YENPLICLNG 175
              P  C   
Sbjct: 123 GPYP--CGKQ 130

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 14/64 (21%), Positives = 19/64 (29%), Gaps = 8/64 (12%)

Query: 132 NGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLN-GRCDNTLGSYRCACQ 189
                                         D D+C  +P  C N G+C + LG Y C C 
Sbjct: 15  ETCSYEEAREVFEDSDKTN----EFWNKYKDGDQCETSP--CQNQGKCKDGLGEYTCTCL 68

Query: 190 PGYS 193
            G+ 
Sbjct: 69  EGFE 72

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 34/157 (21%), Positives = 51/157 (32%), Gaps = 41/157 (26%)

Query: 53  DECYENPLICLNGRCDNTLGSYRCACQPGY------------SPSPDGGFCVDRDECR-T 99
             C        +  CD    +    C  G+              SP  G C    +CR  
Sbjct: 32  KFCRPRDDFFGHYACD---QNGNKTCMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQ 88

Query: 100 PGDH-DECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHA 158
            G     C               D+C  +  C +G+C      ++C C+  +     G  
Sbjct: 89  YGWQGLYC---------------DKCIPHPGCVHGICNE---PWQCLCETNW----GGQL 126

Query: 159 C-IDVDECYENPLICLNGRCDNT-LGSYRCACQPGYS 193
           C  D++ C  +      G C NT    Y+C+C  GYS
Sbjct: 127 CDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYS 163

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 31/165 (18%), Positives = 49/165 (29%), Gaps = 49/165 (29%)

Query: 62  CLNGRCDNTLGSYRCACQPGYS---------PSPD---GGFCVDRDECRTPGDH--DECS 107
             +G  +   G     C   Y          P  D      C               EC+
Sbjct: 8   HHHGSIE---GRSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECN 64

Query: 108 QKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYE 167
           +               C Q     +G C        C+C+ G+     G  C   D+C  
Sbjct: 65  R-------------AICRQGCSPKHGSCKL---PGDCRCQYGW----QGLYC---DKCIP 101

Query: 168 NPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC-VDRDECRTPG 211
           +P  C++G C+     ++C C+  +     G  C  D + C T  
Sbjct: 102 HP-GCVHGICNE---PWQCLCETNWG----GQLCDKDLNYCGTHQ 138

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 50.5 bits (121), Expect = 9e-08
 Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 5/88 (5%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLNGRCDNT 180
             C       NG C +    + C C PG+     G  C +  +EC+          C   
Sbjct: 6   SPCISQPCLHNGSCQDSIWGYTCTCSPGY----EGSNCELAKNECHPERTDGCQHFCLPG 61

Query: 181 LGSYRCACQPGYSPSPDGGFCVDRDECR 208
             SY C+C  GY    D   CV  D+C 
Sbjct: 62  QESYTCSCAQGYRLGEDHKQCVPHDQCA 89

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 44.3 bits (105), Expect = 9e-06
 Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 34/116 (29%)

Query: 53  DECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFC-VDRDECRTPGDHDECSQKK 110
             C   P  CL+ G C +++  Y C C PGY    +G  C + ++EC             
Sbjct: 6   SPCISQP--CLHNGSCQDSIWGYTCTCSPGY----EGSNCELAKNEC------------- 46

Query: 111 KKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECY 166
                          +        C+    S+ C C  G+ L      C+  D+C 
Sbjct: 47  -------------HPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 89

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 42.4 bits (100), Expect = 3e-06
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 7/49 (14%)

Query: 160 IDVDECYENPLICLNG-------RCDNTLGSYRCACQPGYSPSPDGGFC 201
           +D+DEC                  C N +G Y C+C+PGY    D   C
Sbjct: 2   VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 39.0 bits (91), Expect = 5e-05
 Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 19/68 (27%)

Query: 92  VDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFV 151
           VD DEC +     E   +             +C          C N  G + C C+PG+ 
Sbjct: 2   VDLDECASRSKSGEEDPQP------------QCQHL-------CHNYVGGYFCSCRPGYE 42

Query: 152 LSPTGHAC 159
           L    H+C
Sbjct: 43  LQEDRHSC 50

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 38.6 bits (90), Expect = 6e-05
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 7/47 (14%)

Query: 52 VDECYENPLICLNG-------RCDNTLGSYRCACQPGYSPSPDGGFC 91
          +DEC                  C N +G Y C+C+PGY    D   C
Sbjct: 4  LDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 45.2 bits (106), Expect = 5e-06
 Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 1/77 (1%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTL 181
           +EC++ G C+   C N +G+F+C C+ G+ L P   +C  +                   
Sbjct: 2   NECAEEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLP 60

Query: 182 GSYRCACQPGYSPSPDG 198
                        +   
Sbjct: 61  HRSEYTLLLNNLENAIA 77

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 39.9 bits (92), Expect = 4e-04
 Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 19/125 (15%)

Query: 52  VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDE------------CRT 99
           V+EC E    C +  C N+ G+++C C+ GY   PD   C                  + 
Sbjct: 1   VNECAEEG-YC-SQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQV 58

Query: 100 PGDHDECSQKKKKKKKKKKLYHD-----ECSQNGMCANGMCINMDGSFKCQCKPGFVLSP 154
                E +      +    L            +      +  N++GS   +     + SP
Sbjct: 59  LPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP 118

Query: 155 TGHAC 159
            G A 
Sbjct: 119 GGLAV 123

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Length = 91

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 14/62 (22%), Positives = 20/62 (32%), Gaps = 9/62 (14%)

Query: 135 CINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTL--GSYRCACQPG 191
            +  +    C C  G          + V  C E    C N G C   L    + C C  G
Sbjct: 25  VLRSNRVEYCWCNSGR----AQCHSVPVKSCSEPR--CFNGGTCQQALYFSDFVCQCPEG 78

Query: 192 YS 193
           ++
Sbjct: 79  FA 80

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 160 IDVDECYENPLICLN-GRCDNTLGSYRCACQPGYS 193
           +D D+C  NP  CLN G C + + SY C C  G+ 
Sbjct: 1   VDGDQCESNP--CLNGGSCKDDINSYECWCPFGFE 33

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 50 LNVDECYENPLICLN-GRCDNTLGSYRCACQPGYS 83
          ++ D+C  NP  CLN G C + + SY C C  G+ 
Sbjct: 1  VDGDQCESNP--CLNGGSCKDDINSYECWCPFGFE 33

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Length = 318

 Score = 42.8 bits (100), Expect = 3e-05
 Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 6/80 (7%)

Query: 27  YTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLICLNGRCDN------TLGSYRCACQP 80
           YTG    + ++ +   + +            NP    NG C +          Y+CAC  
Sbjct: 237 YTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPT 296

Query: 81  GYSPSPDGGFCVDRDECRTP 100
           G     +G  C D +     
Sbjct: 297 GVKLLENGKTCKDGNSHHHH 316

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Length = 318

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 13/52 (25%), Positives = 17/52 (32%), Gaps = 6/52 (11%)

Query: 165 CYENPLICLNGRCDN------TLGSYRCACQPGYSPSPDGGFCVDRDECRTP 210
              NP    NG C +          Y+CAC  G     +G  C D +     
Sbjct: 265 NATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGNSHHHH 316

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Length = 318

 Score = 38.5 bits (89), Expect = 8e-04
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 121 HDECSQNGMCANGMCIN--MDGSFKCQCKPGFVLSPTGHACIDVDECY 166
           +     NG C++ +C+   +   ++C C  G  L   G  C D +  +
Sbjct: 268 NPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKDGNSHH 314

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Length = 55

 Score = 38.9 bits (91), Expect = 6e-05
 Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 2/45 (4%)

Query: 122 DECS-QNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165
             CS  NG C    C     S  C C  G+ L+  G ACI     
Sbjct: 2   KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPY 45

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Length = 55

 Score = 36.6 bits (85), Expect = 4e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 67 CDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 97
          C     S  C+C  GY+ + +G  C+     
Sbjct: 15 CHEEQNSVVCSCARGYTLADNGKACIPTGPY 45

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Length = 55

 Score = 36.6 bits (85), Expect = 4e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 177 CDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 207
           C     S  C+C  GY+ + +G  C+     
Sbjct: 15  CHEEQNSVVCSCARGYTLADNGKACIPTGPY 45

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 37/183 (20%), Positives = 53/183 (28%), Gaps = 50/183 (27%)

Query: 54  ECYENPLICLNGRCDNTLG-SYRCACQPGY-----------SPSPDGGFCVDRDECRTPG 101
           +        ++    N+ G +     Q                  +GGFC +R  C    
Sbjct: 112 KQDGVAAFEVDVIVMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICE--- 168

Query: 102 DHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID 161
               C         +K L    C   G+C             C C PGF     G  C  
Sbjct: 169 ----CPDGFHGPHCEKALCTPRCMNGGLCVT--------PGFCICPPGF----YGVNC-- 210

Query: 162 VDECYENPLICLN-GRCDNTLGSYRCACQPGYS---------PSP--DGGFCVDRDECRT 209
             +       C N G C       +C C PG           P P  +GG C+ + +C+ 
Sbjct: 211 --DKANCSTTCFNGGTCFYP---GKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKC 265

Query: 210 PGG 212
             G
Sbjct: 266 SKG 268

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 147 KPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
           +     +    A  D++EC +   +  +  C+N +G Y C+C P Y    D   C  
Sbjct: 103 ERFTGFAAYYVAT-DINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159

 Score = 37.9 bits (88), Expect = 8e-04
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 51  NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 93
           +++EC +   +  +  C+N +G Y C+C P Y    D   C  
Sbjct: 116 DINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 Length = 51

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 7/31 (22%), Positives = 12/31 (38%)

Query: 135 CINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165
           C       +C C  G+VL     +C+  +  
Sbjct: 12  CREERSEVRCSCAHGYVLGDDSKSCVSTERF 42

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 159 CIDVDECYENP--LICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDR 204
             D+DEC   P      +  C N LG + C+C+ GY    +   C ++
Sbjct: 121 AEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170

 Score = 38.0 bits (88), Expect = 7e-04
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 51  NVDECYENP--LICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDR 94
           ++DEC   P      +  C N LG + C+C+ GY    +   C ++
Sbjct: 123 DIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	220
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.84
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.79
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.79
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.74
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.74
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.72
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.72
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.68
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.57
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.54
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.53
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.52
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.51
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.48
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.47
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.45
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.4
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.4
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.4
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.35
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.35
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.33
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.31
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.3
2vh0_B	134	Activated factor XA light chain; serine protease,	99.25
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.25
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.25
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.23
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	99.22
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.22
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.19
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.19
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	99.19
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.18
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.17
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.15
2vh0_B	134	Activated factor XA light chain; serine protease,	99.15
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.14
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.14
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.13
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	99.1
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.09
3v65_B	386	Low-density lipoprotein receptor-related protein;	99.05
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.01
3v65_B	386	Low-density lipoprotein receptor-related protein;	99.0
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.98
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.93
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.87
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.85
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.84
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.83
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.76
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.69
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.63
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.59
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.52
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.51
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.47
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.44
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	98.39
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.38
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	98.36
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.3
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.3
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.27
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.26
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.26
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.14
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.12
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	98.1
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.98
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.98
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.96
2wph_E	59	Coagulation factor IXA light chain; serine proteas	97.96
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.94
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	97.9
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	97.9
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.87
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.85
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.81
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.8
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	97.76
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.76
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.74
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.68
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.68
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.67
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.67
1ob1_C	99	Major merozoite surface protein; immune system, im	97.52
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.37
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.35
1szb_A	170	Mannose binding lectin-associated serine protease-	97.3
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.27
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.24
2wph_E	59	Coagulation factor IXA light chain; serine proteas	97.21
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.13
1szb_A	170	Mannose binding lectin-associated serine protease-	97.03
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	96.92
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	96.86
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.78
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.59
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.47
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.29
1nzi_A	159	Complement C1S component; calcium, innate immunity	96.24
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	96.03
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	95.75
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	95.68
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	95.62
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.58
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	95.55
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	95.51
1nzi_A	159	Complement C1S component; calcium, innate immunity	95.45
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	95.43
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	94.99
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	94.76
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	94.66
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	94.65
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	94.52
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	94.33
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	94.29
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	94.26
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	94.12
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	93.77
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	93.75
1ob1_C	99	Major merozoite surface protein; immune system, im	93.71
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	93.15
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	92.62
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	92.54
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	92.21
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	91.98
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	91.92
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	91.89
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	91.59
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	91.42
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	91.37
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	91.16
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	90.94
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	90.68
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	90.61
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	90.54
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	90.19
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	88.97
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	88.4
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	88.05
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	87.95
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	86.29
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	84.6
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	83.29

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.84  E-value=2.2e-20  Score=133.26  Aligned_cols=124  Identities=36%  Similarity=0.914  Sum_probs=94.7

Q ss_pred             CCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCC
Q psy11800         49 DLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN  127 (220)
Q Consensus        49 C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~  127 (220)
                      |++||+|...+.+| .++.|+++.++|+|.|++||.    +..|+                          .++++|...
T Consensus         2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~----G~~C~--------------------------~~~~~C~~~   51 (135)
T 2vj3_A            2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCE--------------------------IDVNECVSN   51 (135)
T ss_dssp             -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSC--------------------------EECCTTTTC
T ss_pred             CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCc----CCccc--------------------------ccCccCCCC
Confidence            67899999544459 669999999999999999998    44553                          123555444


Q ss_pred             CCCCCceEecCCCCeEeecCCCcEeCCCCCce-eecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC-cC
Q psy11800        128 GMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV-DR  204 (220)
Q Consensus       128 ~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C-~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~-~~  204 (220)
                      .+-.+++|++..++|+|.|++||    .|..| .++++|...+  |.+ ++|++..++|.|.|++||.    |..|+ ++
T Consensus        52 ~C~~~~~C~~~~g~~~C~C~~G~----~G~~C~~~~~~C~~~~--C~~~g~C~~~~g~~~C~C~~G~~----G~~C~~~i  121 (135)
T 2vj3_A           52 PCQNDATCLDQIGEFQCICMPGY----EGVHCEVNTDECASSP--CLHNGRCLDKINEFQCECPTGFT----GHLCQVDL  121 (135)
T ss_dssp             CCCSSCEEEECSSCEEEECCTTE----ESSSSCEECCTTTTCC--STTTCEEEECSSCEEEECCTTEE----SSSSCEEC
T ss_pred             CCCCCCEEeCCCCCceeeCCCCC----cCCcceecCCcccCCC--cCCCCEeECCCCCeEEECCCCCc----CCccCccC
Confidence            33345799999999999999999    67788 4899998766  986 8999999999999999999    89996 89


Q ss_pred             CCCCCCCC
Q psy11800        205 DECRTPGG  212 (220)
Q Consensus       205 ~~C~~~~~  212 (220)
                      ++|+..++
T Consensus       122 ~~C~~~~~  129 (135)
T 2vj3_A          122 HHILDAQK  129 (135)
T ss_dssp             C-------
T ss_pred             ccccCCCc
Confidence            99987653

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.79  E-value=3.2e-20  Score=136.46  Aligned_cols=137  Identities=35%  Similarity=0.744  Sum_probs=105.4

Q ss_pred             CCCCccCC-CCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCc--ccCCC---------------C----CCccc
Q psy11800         50 LNVDECYE-NPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDE--CRTPG---------------D----HDECS  107 (220)
Q Consensus        50 ~~i~~C~~-~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~--C~~~~---------------~----~~~C~  107 (220)
                      +|||||.. ++  |.+++|+++.++|+|.|++||++..+++.|+++++  |....               .    .+.|.
T Consensus         1 ~dideC~~~~~--C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~   78 (162)
T 1uzk_A            1 TDVNECLDPTT--CISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCC   78 (162)
T ss_dssp             CCCCGGGSTTS--SBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHH
T ss_pred             CccccCCCCCC--CCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceee
Confidence            47899984 55  86789999999999999999998878899998776  65321               0    35566


Q ss_pred             cccccccccccccccccCCCCCCCCceEe-cCCCCeEeecCC--CcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCe
Q psy11800        108 QKKKKKKKKKKLYHDECSQNGMCANGMCI-NMDGSFKCQCKP--GFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSY  184 (220)
Q Consensus       108 c~~~~~~~~~~~~~~~C~~~~~c~~~~C~-~~~~~~~C~C~~--G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~  184 (220)
                      |..||...      ++|.        .|. +..+.|+|.|++  ||++...+..|++||+|...+..|.+++|+++.++|
T Consensus        79 C~~G~~~~------~~C~--------~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy  144 (162)
T 1uzk_A           79 CSLGKAWG------TPCE--------MCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSF  144 (162)
T ss_dssp             TTTCCEET------TTTE--------ECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCE
T ss_pred             CCCCCCcC------CCcc--------cCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCE
Confidence            66666521      1221        122 245678999988  998876677889999998766669878999999999


Q ss_pred             EEeCCCCCccCCCCCCCC
Q psy11800        185 RCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       185 ~C~C~~G~~~~~~g~~C~  202 (220)
                      +|.|++||.+..+++.|+
T Consensus       145 ~C~C~~Gy~g~~d~~~C~  162 (162)
T 1uzk_A          145 QCRCPTGYYLNEDTRVCD  162 (162)
T ss_dssp             EEECCTTCCBCTTTCBBC
T ss_pred             EeeCCCCccCCCCCCccC
Confidence            999999999887777763

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.79  E-value=2e-20  Score=135.43  Aligned_cols=135  Identities=29%  Similarity=0.677  Sum_probs=103.1

Q ss_pred             CCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCC
Q psy11800         50 LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGM  129 (220)
Q Consensus        50 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~  129 (220)
                      ++||+|..+|  |.+++|+++.++|+|.|++||++...+..|.+..         ...|..++.+..|+..+++|.... 
T Consensus         2 ~dideC~~~p--C~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~---------~~~C~~~~~g~~C~~~~~~c~~~~-   69 (147)
T 2w86_A            2 ADIDECESSP--CINGVCKNSPGSFICECSSESTLDPTKTICIETI---------KGTCWQTVIDGRCEININGATLKS-   69 (147)
T ss_dssp             CCCCGGGGCC--SBTSEEEEETTEEEEECCTTEEECTTSSBEEECC---------CEEEEEEEETTEEEEEEEEEECHH-
T ss_pred             CcCccCcCCC--CCCCEeECCCCCEEeECCCCcccCCCCCeecCCC---------CCcccCCCCCCccccCCCccccCC-
Confidence            4789999877  9668999999999999999999876666776542         124455666777776666653221 


Q ss_pred             CCCceEecCCC----------CeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCC
Q psy11800        130 CANGMCINMDG----------SFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGG  199 (220)
Q Consensus       130 c~~~~C~~~~~----------~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~  199 (220)
                          .|.+..+          .|.|.|++||++. .+..|++||+|+..++.|.+++|+++.++|+|.|++||.+..+++
T Consensus        70 ----~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~-~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~  144 (147)
T 2w86_A           70 ----QCCSSLGAAWGSPCTLCQVDPICGKGYSRI-KGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGR  144 (147)
T ss_dssp             ----HHHTTTCSEETTTTEECCCCTTTCTTEEEE-ETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSS
T ss_pred             ----ccccCcCcccCCCcccCCCcccCCCccccC-CCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCC
Confidence                1112211          2678999999763 588999999999777779888999999999999999999888777


Q ss_pred             CC
Q psy11800        200 FC  201 (220)
Q Consensus       200 ~C  201 (220)
                      .|
T Consensus       145 ~C  146 (147)
T 2w86_A          145 IC  146 (147)
T ss_dssp             CB
T ss_pred             ee
Confidence            76

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.74  E-value=1.5e-18  Score=130.31  Aligned_cols=129  Identities=24%  Similarity=0.538  Sum_probs=103.5

Q ss_pred             CCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccC---------------CC-----CCCccccccccccccccccc
Q psy11800         62 CLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT---------------PG-----DHDECSQKKKKKKKKKKLYH  121 (220)
Q Consensus        62 C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~---------------~~-----~~~~C~c~~~~~~~~~~~~~  121 (220)
                      |.+++|+++.++|+|.|++||.+. ++..|+++++|..               ..     ..+.|.|..||.+..+...+
T Consensus        13 C~ng~C~~~~g~~~C~C~~G~~g~-~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~   91 (186)
T 1z1y_A           13 CXNGQLVQMSNHFXCMCNEGLVHL-SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVL   91 (186)
T ss_dssp             CBTEEEEECSSCEEEEECTTEEEE-ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEE
T ss_pred             CCCCEeECCCCCeEeECCCCCccC-CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCC
Confidence            877899999999999999999865 3456777666652               12     35789999999998665557


Q ss_pred             cccCCCCCCCCceEe----cCCCCeEeecCCCcEeCC-CCCceeec--CcCCCCCCCC-CC-CeEecCCCCeEEeCCCCC
Q psy11800        122 DECSQNGMCANGMCI----NMDGSFKCQCKPGFVLSP-TGHACIDV--DECYENPLIC-LN-GRCDNTLGSYRCACQPGY  192 (220)
Q Consensus       122 ~~C~~~~~c~~~~C~----~~~~~~~C~C~~G~~~~~-~g~~C~~i--~~C~~~~~~C-~~-~~C~~~~~~~~C~C~~G~  192 (220)
                      ++|....+-.+++|+    +..++|+|.|++||.+.. ++..|.++  ++|..   .| .+ ++|+++.++|+|.|++||
T Consensus        92 d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~---~C~~~~~~C~n~~g~y~C~C~~G~  168 (186)
T 1z1y_A           92 DVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQL---XCNTDNEVCXNVEGVYXCQCMEGF  168 (186)
T ss_dssp             GGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCC---CCCTTTEEEEEETTEEEEEECTTC
T ss_pred             CcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccc---cccccCcceecCCCCeeeECCCCC
Confidence            899766533468998    888899999999998754 56889765  89973   49 65 899999999999999999


Q ss_pred             cc
Q psy11800        193 SP  194 (220)
Q Consensus       193 ~~  194 (220)
                      .+
T Consensus       169 ~g  170 (186)
T 1z1y_A          169 TF  170 (186)
T ss_dssp             EE
T ss_pred             cc
Confidence            83

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.74  E-value=8.5e-18  Score=120.95  Aligned_cols=117  Identities=34%  Similarity=0.762  Sum_probs=92.4

Q ss_pred             C-CCCeeeeCCCceEeeCCCCCccCC-----CCCCccCCCcccCCCCCCccccccccccccccccccccCCC--CCCC-C
Q psy11800         62 C-LNGRCDNTLGSYRCACQPGYSPSP-----DGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN--GMCA-N  132 (220)
Q Consensus        62 C-~~~~C~~~~g~~~C~C~~g~~~~~-----~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~--~~c~-~  132 (220)
                      | .+++|++.   |+|.|++||++..     ++..|+++                           ++|...  ..|. +
T Consensus         9 C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~di---------------------------deC~~~~~~~C~~~   58 (143)
T 2bou_A            9 CPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDI---------------------------NECATLSKVSCGKF   58 (143)
T ss_dssp             CCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEEC---------------------------CGGGC----CCCTT
T ss_pred             CCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCcc---------------------------ccccCCCCCCCCCC
Confidence            7 56899874   8999999999642     23456555                           455433  2454 5


Q ss_pred             ceEecCCCCeEeecCCCcEeCCC--------CCceeecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        133 GMCINMDGSFKCQCKPGFVLSPT--------GHACIDVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       133 ~~C~~~~~~~~C~C~~G~~~~~~--------g~~C~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      ++|++..++|+|.|++||.+...        +..|.+|++|...+..|.+ ++|+++.++|+|.|++||.+..+++.|++
T Consensus        59 ~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~  138 (143)
T 2bou_A           59 SDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK  138 (143)
T ss_dssp             EEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBT
T ss_pred             CEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCcc
Confidence            79999999999999999988632        4589999999875556985 89999999999999999998888899998


Q ss_pred             CCCCC
Q psy11800        204 RDECR  208 (220)
Q Consensus       204 ~~~C~  208 (220)
                      +++|+
T Consensus       139 ~~~C~  143 (143)
T 2bou_A          139 DTVCE  143 (143)
T ss_dssp             TCCBC
T ss_pred             CCccC
Confidence            88874

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.72  E-value=5.1e-17  Score=116.86  Aligned_cols=122  Identities=30%  Similarity=0.752  Sum_probs=89.6

Q ss_pred             CccCCCCCCC-CCCeeeeCC--CceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCC
Q psy11800         53 DECYENPLIC-LNGRCDNTL--GSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGM  129 (220)
Q Consensus        53 ~~C~~~~~~C-~~~~C~~~~--g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~  129 (220)
                      |+|..+|  | ++++|++..  ++|+|.|++||+    +..|+...++...              ......+++|....+
T Consensus         1 d~C~~~p--C~~~g~C~~~~~~g~~~C~C~~G~~----G~~C~~~~~~~~~--------------~~~c~~~~~C~~~~C   60 (143)
T 4d90_A            1 DICDPNP--CENGGICLPGLADGSFSCECPDGFT----DPNCSSVVEVASD--------------EEEPTSAGPCTPNPC   60 (143)
T ss_dssp             --CCSCC--CGGGCEEEC-----CCEEECCTTCC----TTTTCSCCCCTTT--------------TTSCCCCCTTSSCCC
T ss_pred             CcCCCCc--CCCCCEeeCCCCCCCEEeECCCCCC----CCCCccCcccccc--------------ccccccCCcCCCCCC
Confidence            4677777  9 669999876  689999999998    5667665443221              111123467755444


Q ss_pred             CCCceEe-------cCCCCeEeecCCCcEeCCCCCcee-ecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCC
Q psy11800        130 CANGMCI-------NMDGSFKCQCKPGFVLSPTGHACI-DVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGF  200 (220)
Q Consensus       130 c~~~~C~-------~~~~~~~C~C~~G~~~~~~g~~C~-~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~  200 (220)
                      .++++|+       +..++|+|.|++||    .|..|. ++++|...+  |.+ ++|+++.++|.|.|++||.    |+.
T Consensus        61 ~~~g~C~~~~~~~~~~~~~~~C~C~~G~----~G~~C~~~i~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~----G~~  130 (143)
T 4d90_A           61 HNGGTCEISEAYRGDTFIGYVCKCPRGF----NGIHCQHNINECEVEP--CKNGGICTDLVANYSCECPGEFM----GRN  130 (143)
T ss_dssp             CTTCEEEECCCEETTEECCEEEECCTTE----ESTTSCEECCTTTTCC--SCTTCEEEEETTEEEEECCTTCB----STT
T ss_pred             CCCCEecCCCccccCCCCCeEeECcCCC----cCCCcccCCCcCCCCC--CCCCCEeECCCCCeEeECCCCCc----cCC
Confidence            4568998       66678999999999    788995 999998776  986 8999999999999999999    888


Q ss_pred             CCcC
Q psy11800        201 CVDR  204 (220)
Q Consensus       201 C~~~  204 (220)
                      |+..
T Consensus       131 c~~~  134 (143)
T 4d90_A          131 CQYK  134 (143)
T ss_dssp             SCBC
T ss_pred             ceec
Confidence            8643

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.72  E-value=3.9e-17  Score=141.68  Aligned_cols=129  Identities=29%  Similarity=0.699  Sum_probs=99.9

Q ss_pred             CCCCccCCCCCCC-CCCeeeeCCC-ceEe-eCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCC
Q psy11800         50 LNVDECYENPLIC-LNGRCDNTLG-SYRC-ACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQ  126 (220)
Q Consensus        50 ~~i~~C~~~~~~C-~~~~C~~~~g-~~~C-~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~  126 (220)
                      ++|++|..+|  | +++.|+++.+ +|+| .|++||++  +++.|+.+++|..                           
T Consensus         1 ~DIDeC~~nP--C~~gg~C~n~~~Gsy~C~~C~~GytG--dg~~CeDiDEC~~---------------------------   49 (634)
T 1yo8_A            1 ADPDGCLSNP--CFPGAQCSSFPDGSWSCGFCPVGFLG--NGTHCEDLDECAL---------------------------   49 (634)
T ss_dssp             ---CGGGGCC--SCTTCCEEECTTSCEEECCCCTTBCS--CSSSCCBCCTTTT---------------------------
T ss_pred             CcccccCCCC--CCCCCEEecCCCCCeECCcCCCccCC--CCCCccccccccC---------------------------
Confidence            3689998777  9 5689999985 5999 99999985  3578877755532                           


Q ss_pred             CC-CCC-Cc---eEecCCCCeEee-cCCCcEeCC-----------CCCceeecCcCCCCCCCCCC-CeEecCC----CCe
Q psy11800        127 NG-MCA-NG---MCINMDGSFKCQ-CKPGFVLSP-----------TGHACIDVDECYENPLICLN-GRCDNTL----GSY  184 (220)
Q Consensus       127 ~~-~c~-~~---~C~~~~~~~~C~-C~~G~~~~~-----------~g~~C~~i~~C~~~~~~C~~-~~C~~~~----~~~  184 (220)
                      .+ .|. ++   +|++..++|+|. |++||.+..           .+..|.++++|...++.|.+ ++|+++.    ++|
T Consensus        50 ~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY  129 (634)
T 1yo8_A           50 VPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMY  129 (634)
T ss_dssp             SCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSE
T ss_pred             CCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccce
Confidence            22 243 45   899999999998 999998753           34569999999976667985 8999998    999


Q ss_pred             EEeCCCCCccCCCCCCCC---cCCCCCCCC
Q psy11800        185 RCACQPGYSPSPDGGFCV---DRDECRTPG  211 (220)
Q Consensus       185 ~C~C~~G~~~~~~g~~C~---~~~~C~~~~  211 (220)
                      +|.|++||.  .++..|+   ++++|....
T Consensus       130 ~C~C~~Gy~--GdG~~Ce~d~DiDeC~~~~  157 (634)
T 1yo8_A          130 KCECQTGYA--GDGLICGEDSDLDGWPNLN  157 (634)
T ss_dssp             EEEECTTEE--ESSSSEEECTTSSSSCSSC
T ss_pred             eeeccCCcc--ccCcccccccCcccccCCC
Confidence            999999998  3468896   788886544

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.68  E-value=1.5e-17  Score=115.64  Aligned_cols=115  Identities=31%  Similarity=0.850  Sum_probs=85.0

Q ss_pred             CCCCccCCCCCCCCCCeeeeC-CCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCC
Q psy11800         50 LNVDECYENPLICLNGRCDNT-LGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNG  128 (220)
Q Consensus        50 ~~i~~C~~~~~~C~~~~C~~~-~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~  128 (220)
                      ++||+|..+|  |.+ +|+++ .++|+|.|++||.+...     ++++|..                       +|. ..
T Consensus         2 ~dideC~~~p--C~~-~C~~~~~g~y~C~C~~Gy~g~~~-----~~~~C~~-----------------------~C~-~~   49 (118)
T 1dx5_I            2 EPVDPCFRAN--CEY-QCQPLDQTSYLCVCAEGFAPIPH-----EPHRCQM-----------------------FCN-QT   49 (118)
T ss_dssp             CCCCGGGGCC--CSS-EEEECSSSCEEEECCTTEEEETT-----EEEEEEE-----------------------CCC-SS
T ss_pred             CccccCCCCC--CCC-CCCCCCCCCEEeECCCCccccCC-----CCCcccc-----------------------ccC-CC
Confidence            3689998777  865 99999 89999999999986421     1222211                       121 12


Q ss_pred             CCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCC-CCCC
Q psy11800        129 MCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD-GGFC  201 (220)
Q Consensus       129 ~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~-g~~C  201 (220)
                      .|. ++|++ .++|+|.|++||.+.. +..|++||+|... ..| +++|+++.++|+|.|++||.+..+ ++.|
T Consensus        50 ~C~-~~C~~-~~~y~C~C~~Gy~~~~-g~~C~dideC~~~-~~C-~~~C~n~~g~y~C~C~~G~~g~~~~g~~C  118 (118)
T 1dx5_I           50 ACP-ADCDP-NTQASCECPEGYILDD-GFICTDIDECENG-GFC-SGVCHNLPGTFECICGPDSALAGQIGTDC  118 (118)
T ss_dssp             EEE-CEECT-TSTTCEECCTTEEEET-TTEEEECCHHHHC-SSC-SSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred             CCC-CcccC-CCCeEeECCCCccCCC-CCccccccccCCC-CCC-cCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence            222 47877 4889999999997754 8899999999872 348 679999999999999999986554 4443

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.57  E-value=4e-15  Score=97.49  Aligned_cols=82  Identities=43%  Similarity=1.013  Sum_probs=68.7

Q ss_pred             cccccCCC-CCCCCceEecCCCCeEeecCCCcEeCC-CCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCC
Q psy11800        120 YHDECSQN-GMCANGMCINMDGSFKCQCKPGFVLSP-TGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD  197 (220)
Q Consensus       120 ~~~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~-~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~  197 (220)
                      ++|+|... ..|.+++|++..++|+|.|++||.+.. .+..|.+||+|...+..|.+++|+++.++|.|.|++||.+..+
T Consensus         2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~   81 (86)
T 1lmj_A            2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPN   81 (86)
T ss_dssp             CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSS
T ss_pred             ccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCC
Confidence            45777654 346677999999999999999998753 4789999999998776677689999999999999999998777


Q ss_pred             CCCC
Q psy11800        198 GGFC  201 (220)
Q Consensus       198 g~~C  201 (220)
                      ++.|
T Consensus        82 ~~~C   85 (86)
T 1lmj_A           82 ISAC   85 (86)
T ss_dssp             SCCC
T ss_pred             CCcc
Confidence            7766

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.54  E-value=1.9e-14  Score=93.33  Aligned_cols=75  Identities=43%  Similarity=1.116  Sum_probs=62.2

Q ss_pred             cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCC
Q psy11800        120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD  197 (220)
Q Consensus       120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~  197 (220)
                      ++++|.....|.+++|++..++|+|.|++||.+  .+..|.+||+|... ..|.+++|+++.++|.|.|++||.+..+
T Consensus         4 dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~dideC~~~-~~C~~~~C~n~~g~y~C~C~~G~~g~~~   78 (82)
T 1emn_A            4 DMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDECSVG-NPCGNGTCKNVIGGFECTCEEGFEPGPM   78 (82)
T ss_dssp             CCCSSSSTTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECCGGGTC-CTTSSSCEEECSSSEEECCSSSSCCCSS
T ss_pred             ccccCCCCCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCcccccCC-CCCCCCEeECCCCCEEeECCCCeEeCCC
Confidence            457776544566789999999999999999976  58899999999842 2488789999999999999999996544

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.53  E-value=2.3e-14  Score=101.91  Aligned_cols=106  Identities=31%  Similarity=0.737  Sum_probs=75.7

Q ss_pred             CCCccccccCCCCCCCCC-CCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCcccccc
Q psy11800         33 TQTYTGLSDSLSLGVSDL-NVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKK  110 (220)
Q Consensus        33 ~~~~~~~~~~~~~g~~C~-~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~  110 (220)
                      ...|.+.+..+|.|..|+ ++++|..++  | .++.|++..++|+|.|++||.    +..|+.                 
T Consensus        25 ~g~~~C~C~~Gy~G~~C~~~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~-----------------   81 (135)
T 2vj3_A           25 LGSFECQCLQGYTGPRCEIDVNECVSNP--CQNDATCLDQIGEFQCICMPGYE----GVHCEV-----------------   81 (135)
T ss_dssp             SSSEEEECCTTEESTTSCEECCTTTTCC--CCSSCEEEECSSCEEEECCTTEE----SSSSCE-----------------
T ss_pred             CCCEEEECCCCCcCCcccccCccCCCCC--CCCCCEEeCCCCCceeeCCCCCc----CCccee-----------------
Confidence            345788888899999994 899999877  8 568999999999999999998    445541                 


Q ss_pred             ccccccccccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCce-eecCcCCCCCCCCCC
Q psy11800        111 KKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLN  174 (220)
Q Consensus       111 ~~~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C-~~i~~C~~~~~~C~~  174 (220)
                               ++++|....+-.+++|++..+.|+|.|++||    .|..| .+|++|...++.|++
T Consensus        82 ---------~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~----~G~~C~~~i~~C~~~~~~c~~  133 (135)
T 2vj3_A           82 ---------NTDECASSPCLHNGRCLDKINEFQCECPTGF----TGHLCQVDLHHILDAQKMVWN  133 (135)
T ss_dssp             ---------ECCTTTTCCSTTTCEEEECSSCEEEECCTTE----ESSSSCEECC-----------
T ss_pred             ---------cCCcccCCCcCCCCEeECCCCCeEEECCCCC----cCCccCccCccccCCCcceee
Confidence                     1245544333345899999999999999999    67889 689999887765653

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.52  E-value=1e-14  Score=95.75  Aligned_cols=83  Identities=35%  Similarity=0.799  Sum_probs=68.6

Q ss_pred             cccccCCCCC-CCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeC--CCCCccCC
Q psy11800        120 YHDECSQNGM-CANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCAC--QPGYSPSP  196 (220)
Q Consensus       120 ~~~~C~~~~~-c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C--~~G~~~~~  196 (220)
                      ++++|...+. |.+++|++..++|+|.|++||.+.+.+..|.+|++|..++  |. ++|+++.++|.|.|  ..||.+..
T Consensus         2 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~--C~-~~C~n~~g~y~C~C~g~~G~~~~~   78 (87)
T 1z6c_A            2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENM--CA-QLCVNYPGGYTCYCDGKKGFKLAQ   78 (87)
T ss_dssp             CSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSC--CS-SEECCCSSSCCEECCSSSCCBCCT
T ss_pred             ccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCC--CC-CEEEccCCCEEEECCCCcCCcccC
Confidence            3577766542 5668999999999999999998877789999999998765  87 69999999999999  58888777


Q ss_pred             CCCCCCcCC
Q psy11800        197 DGGFCVDRD  205 (220)
Q Consensus       197 ~g~~C~~~~  205 (220)
                      +++.|++|+
T Consensus        79 ~~~~C~di~   87 (87)
T 1z6c_A           79 DQKSCEVVS   87 (87)
T ss_dssp             TSSSCBCCC
T ss_pred             CCCcceECc
Confidence            777777653

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.51  E-value=1.5e-14  Score=103.80  Aligned_cols=101  Identities=29%  Similarity=0.591  Sum_probs=70.7

Q ss_pred             CCCCCCCCccCCCC-CCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccc
Q psy11800         46 GVSDLNVDECYENP-LIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDE  123 (220)
Q Consensus        46 g~~C~~i~~C~~~~-~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~  123 (220)
                      +..|++|++|.... ..| .++.|+++.++|+|.|++||.+......+..                  ..+..| .++++
T Consensus        38 ~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~------------------~~~~~C-~dide   98 (143)
T 2bou_A           38 METCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKN------------------ESENTC-QDVDE   98 (143)
T ss_dssp             TCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSS------------------GGGCCE-EECCH
T ss_pred             CCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcccccc------------------CCCCCc-CCccC
Confidence            36899999999752 248 5689999999999999999997543221110                  011111 23466


Q ss_pred             cCC-CCCCC-CceEecCCCCeEeecCCCcEeCCCCCceeecCcC
Q psy11800        124 CSQ-NGMCA-NGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC  165 (220)
Q Consensus       124 C~~-~~~c~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C  165 (220)
                      |.. ...|. +++|++..++|+|.|++||.+...++.|.++++|
T Consensus        99 C~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C  142 (143)
T 2bou_A           99 CSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVC  142 (143)
T ss_dssp             HHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred             ccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCccCCcc
Confidence            653 23454 5799999999999999999888777778777766

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.48  E-value=2.9e-13  Score=117.58  Aligned_cols=109  Identities=28%  Similarity=0.650  Sum_probs=84.0

Q ss_pred             ccc-cccCCCCC--CCCCCCCccCCCCCCC-CCC---eeeeCCCceEee-CCCCCccCC-----------CCCCccCCCc
Q psy11800         36 YTG-LSDSLSLG--VSDLNVDECYENPLIC-LNG---RCDNTLGSYRCA-CQPGYSPSP-----------DGGFCVDRDE   96 (220)
Q Consensus        36 ~~~-~~~~~~~g--~~C~~i~~C~~~~~~C-~~~---~C~~~~g~~~C~-C~~g~~~~~-----------~~~~C~~~~~   96 (220)
                      |.| .|..+|.|  ..|+++++|..+++.| .++   +|+++.++|+|. |++||.+..           +++.|..   
T Consensus        25 y~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d---  101 (634)
T 1yo8_A           25 WSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP---  101 (634)
T ss_dssp             EEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEE---
T ss_pred             eECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccc---
Confidence            777 78788877  7899999999888889 556   899999999998 999998542           1222333   


Q ss_pred             ccCCCCCCccccccccccccccccccccCCC-CCCC-CceEecCC----CCeEeecCCCcEeCCCCCcee---ecCcCCC
Q psy11800         97 CRTPGDHDECSQKKKKKKKKKKLYHDECSQN-GMCA-NGMCINMD----GSFKCQCKPGFVLSPTGHACI---DVDECYE  167 (220)
Q Consensus        97 C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~-~~c~-~~~C~~~~----~~~~C~C~~G~~~~~~g~~C~---~i~~C~~  167 (220)
                                              +++|... ..|. +++|++..    ++|+|.|++||.+  .+..|.   ++++|..
T Consensus       102 ------------------------ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce~d~DiDeC~~  155 (634)
T 1yo8_A          102 ------------------------ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG--DGLICGEDSDLDGWPN  155 (634)
T ss_dssp             ------------------------CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE--SSSSEEECTTSSSSCS
T ss_pred             ------------------------cccccCCCcccccCccccccccccccceeeeccCCccc--cCcccccccCcccccC
Confidence                                    4666542 3454 57999998    8999999999976  567895   7899976


Q ss_pred             CCCCCC
Q psy11800        168 NPLICL  173 (220)
Q Consensus       168 ~~~~C~  173 (220)
                      ....|.
T Consensus       156 ~~~~C~  161 (634)
T 1yo8_A          156 LNLVCA  161 (634)
T ss_dssp             SCCTTT
T ss_pred             CCCccc
Confidence            665665

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.47  E-value=4.6e-14  Score=92.38  Aligned_cols=83  Identities=41%  Similarity=0.964  Sum_probs=64.6

Q ss_pred             CCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCC-CCCCccCCCcccCCCCCCccccccccccccccccccccCCC-
Q psy11800         50 LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSP-DGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN-  127 (220)
Q Consensus        50 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~-~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~-  127 (220)
                      ++||+|..++..|.++.|+++.++|+|.|++||.+.. ++..|+++++                           |... 
T Consensus         1 ~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dide---------------------------C~~~~   53 (86)
T 1lmj_A            1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDE---------------------------CQRDP   53 (86)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCH---------------------------HHHCS
T ss_pred             CccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCccc---------------------------ccCCC
Confidence            3789999877779667999999999999999998642 3566766644                           4333 


Q ss_pred             CCCCCceEecCCCCeEeecCCCcEeCCCCCce
Q psy11800        128 GMCANGMCINMDGSFKCQCKPGFVLSPTGHAC  159 (220)
Q Consensus       128 ~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C  159 (220)
                      ..|.+++|++..++|+|.|++||.+...++.|
T Consensus        54 ~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~C   85 (86)
T 1lmj_A           54 LLCRGGVCHNTEGSYRCECPPGHQLSPNISAC   85 (86)
T ss_dssp             STTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CcCCCCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence            23456799999999999999999876666554

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.45  E-value=9e-14  Score=90.09  Aligned_cols=78  Identities=50%  Similarity=1.043  Sum_probs=60.7

Q ss_pred             CCCCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCC
Q psy11800         48 SDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN  127 (220)
Q Consensus        48 ~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~  127 (220)
                      +|++||+|.. +..|.++.|+++.++|+|.|++||.+  ++..|.+++                           +|...
T Consensus         1 sC~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~did---------------------------eC~~~   50 (82)
T 1emn_A            1 SAVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTD---------------------------ECSVG   50 (82)
T ss_dssp             CCCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECC---------------------------GGGTC
T ss_pred             CCCccccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCcc---------------------------cccCC
Confidence            4788999986 33486699999999999999999985  366776664                           44433


Q ss_pred             CCCCCceEecCCCCeEeecCCCcEeCCC
Q psy11800        128 GMCANGMCINMDGSFKCQCKPGFVLSPT  155 (220)
Q Consensus       128 ~~c~~~~C~~~~~~~~C~C~~G~~~~~~  155 (220)
                      ..|.+++|++..++|+|.|++||.+.+.
T Consensus        51 ~~C~~~~C~n~~g~y~C~C~~G~~g~~~   78 (82)
T 1emn_A           51 NPCGNGTCKNVIGGFECTCEEGFEPGPM   78 (82)
T ss_dssp             CTTSSSCEEECSSSEEECCSSSSCCCSS
T ss_pred             CCCCCCEeECCCCCEEeECCCCeEeCCC
Confidence            3455679999999999999999966433

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.40  E-value=1.6e-13  Score=98.59  Aligned_cols=83  Identities=27%  Similarity=0.565  Sum_probs=68.4

Q ss_pred             cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeE-ecCCCCeEEeCCCCCccCCCC
Q psy11800        120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRC-DNTLGSYRCACQPGYSPSPDG  198 (220)
Q Consensus       120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C-~~~~~~~~C~C~~G~~~~~~g  198 (220)
                      ++|+|..+++-++++|++..++|+|.|++||    .|..|.++++|...+..|.+ .| +++.++|.|.|++||.+..+|
T Consensus        47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~----~G~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG  121 (146)
T 1x7a_L           47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGF----EGKNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQ  121 (146)
T ss_dssp             ---CCSSCSSCTTCEEEECSSCEEEECCSSE----ESTTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEECTTS
T ss_pred             CcCcCCCCCCCCCCEeECCCCCEEEecCCCC----cCCcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeCCCC
Confidence            3467765444345899999999999999999    68899888999876556876 89 999999999999999998899


Q ss_pred             CCCCcCCCC
Q psy11800        199 GFCVDRDEC  207 (220)
Q Consensus       199 ~~C~~~~~C  207 (220)
                      +.|+++++.
T Consensus       122 ~~C~~~~~~  130 (146)
T 1x7a_L          122 KSCKPAVPF  130 (146)
T ss_dssp             SSEEECSSS
T ss_pred             CcCCCCCCC
Confidence            999888764

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.40  E-value=1.3e-13  Score=101.63  Aligned_cols=117  Identities=27%  Similarity=0.640  Sum_probs=84.8

Q ss_pred             CCCeeeeCCCceEeeCCCCCccCCCCCCccCC---Cccc-CC---CCCCccccccccccccccccccccCCCCCCCCceE
Q psy11800         63 LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDR---DECR-TP---GDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMC  135 (220)
Q Consensus        63 ~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~---~~C~-~~---~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~~~C  135 (220)
                      .+++|..   ...|.|.+||++    ..|+..   ..|. ..   .+.+.|.|..+|+|..|+    +|.....|.+++|
T Consensus        42 ~~g~C~~---~g~C~C~~G~~G----~~C~~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~C~----~C~~~~~C~~g~C  110 (169)
T 2vj2_A           42 GHYACDQ---NGNKTCMEGWMG----PECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCD----KCIPHPGCVHGIC  110 (169)
T ss_dssp             EEEEECS---SCCEEECTTEES----TTSCEECCCTTCCTTTEECSSTTCCEECTTEESSSSC----EECCCTTCSSEEC
T ss_pred             CCCEeCC---CCeeECCCCCcC----CCCCCCCCCCCCCCCCcccCCCCeeECCCCCCCCCcc----cCCCCCCCCCCCc
Confidence            3467853   357899999984    344321   1121 11   125789999999998885    3555555777788


Q ss_pred             ecCCCCeEeecCCCcEeCCCCCcee-ecCcCCCCCCCCCC-CeEecC-CCCeEEeCCCCCccCCCCCCCC
Q psy11800        136 INMDGSFKCQCKPGFVLSPTGHACI-DVDECYENPLICLN-GRCDNT-LGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       136 ~~~~~~~~C~C~~G~~~~~~g~~C~-~i~~C~~~~~~C~~-~~C~~~-~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      +   +.++|.|.+||    .|..|. ++++|... ..|.+ ++|+++ .++|+|.|++||.    |..|+
T Consensus       111 ~---~~~~C~C~~G~----~G~~C~~~~~~C~~~-~~C~~~g~C~~~~~~~~~C~C~~G~~----G~~Ce  168 (169)
T 2vj2_A          111 N---EPWQCLCETNW----GGQLCDKDLNYCGTH-QPCLNGGTCSNTGPDKYQCSCPEGYS----GPNCE  168 (169)
T ss_dssp             S---STTCCEECTTE----ETTTTCEESCHHHHT-CCCCTTCEEEECSTTCEEEECCTTCC----STTSC
T ss_pred             C---CCCEEeCCCCC----CCCcccCCCCCCCCC-CCCCCCCEEcCCCCCCcEeECCCCCc----CcCcC
Confidence            7   46799999999    678895 89999751 24986 899996 7899999999998    88775

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.40  E-value=9.2e-14  Score=104.12  Aligned_cols=113  Identities=25%  Similarity=0.638  Sum_probs=86.9

Q ss_pred             CCccCCCcccCCCCCCccccccccccc---cccccccccCC---CCCCC-CceEecCC-----CCeEeecCCCcEeCCCC
Q psy11800         89 GFCVDRDECRTPGDHDECSQKKKKKKK---KKKLYHDECSQ---NGMCA-NGMCINMD-----GSFKCQCKPGFVLSPTG  156 (220)
Q Consensus        89 ~~C~~~~~C~~~~~~~~C~c~~~~~~~---~~~~~~~~C~~---~~~c~-~~~C~~~~-----~~~~C~C~~G~~~~~~g  156 (220)
                      ..|.+. .|......+.|.|..||.+.   .|. ++++|..   ...|. +++|++..     ++|+|.|++||.+.  .
T Consensus        11 ~pC~ng-~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~--~   86 (186)
T 1z1y_A           11 TICXNG-QLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLX--E   86 (186)
T ss_dssp             CCCBTE-EEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEE--T
T ss_pred             CCCCCC-EeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccC--C
Confidence            345533 56665667899999999987   554 7799973   33454 58999998     89999999999763  3


Q ss_pred             CceeecCcCCCCCCCCCC-CeEe----cCCCCeEEeCCCCCccCC-CCCCCCcC--CCCC
Q psy11800        157 HACIDVDECYENPLICLN-GRCD----NTLGSYRCACQPGYSPSP-DGGFCVDR--DECR  208 (220)
Q Consensus       157 ~~C~~i~~C~~~~~~C~~-~~C~----~~~~~~~C~C~~G~~~~~-~g~~C~~~--~~C~  208 (220)
                      ..|. +++|...+  |.+ +.|+    ++.++|.|.|++||.+.. ++..|+++  ++|.
T Consensus        87 ~~C~-~d~C~~~~--C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~  143 (186)
T 1z1y_A           87 DTCV-LDVCQYXN--CGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ  143 (186)
T ss_dssp             TEEE-EGGGTTCC--CCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC
T ss_pred             CCCC-CCcCcCCC--CCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc
Confidence            3665 89998776  985 8998    888899999999998533 56889865  7786

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.35  E-value=1.1e-12  Score=86.51  Aligned_cols=60  Identities=30%  Similarity=0.789  Sum_probs=51.0

Q ss_pred             EecCCCCeEeecCCCcEeCCCCCcee--ecCcCCCCCCCCCC-CeEecCC--CCeEEeCCCCCccCCCCCCCC-cCCC
Q psy11800        135 CINMDGSFKCQCKPGFVLSPTGHACI--DVDECYENPLICLN-GRCDNTL--GSYRCACQPGYSPSPDGGFCV-DRDE  206 (220)
Q Consensus       135 C~~~~~~~~C~C~~G~~~~~~g~~C~--~i~~C~~~~~~C~~-~~C~~~~--~~~~C~C~~G~~~~~~g~~C~-~~~~  206 (220)
                      |++..+.|+|.|++||    .  .|.  ++++|..++  |.| ++|++..  ++|.|.|++||.    |++|+ +++|
T Consensus        25 C~n~~~~y~C~C~~G~----~--~C~~~~~~~C~~~p--C~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~~ide   90 (91)
T 1tpg_A           25 VLRSNRVEYCWCNSGR----A--QCHSVPVKSCSEPR--CFNGGTCQQALYFSDFVCQCPEGFA----GKSCEIDTRA   90 (91)
T ss_dssp             CSSSSCEEEEECSSSC----C--BCCEECEEECSSCC--SCTTCEEEEESSSSCEEEECCTTCB----SSSCCBCSSC
T ss_pred             cccCCCCcEeECCCCC----c--ccccCcCCcccCCC--CCCCCEeecCCCCCCeEeECCCCCc----CCcCCcCCCC
Confidence            4566788999999999    4  774  789999877  987 8999987  899999999998    99997 6665

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.35  E-value=4.2e-13  Score=87.93  Aligned_cols=84  Identities=39%  Similarity=0.886  Sum_probs=64.3

Q ss_pred             CCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCC
Q psy11800         50 LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGM  129 (220)
Q Consensus        50 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~  129 (220)
                      ++|++|..++..|.++.|+++.++|+|.|++||.+..+++.|+++++|.                           . ..
T Consensus         1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~---------------------------~-~~   52 (87)
T 1z6c_A            1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECS---------------------------E-NM   52 (87)
T ss_dssp             CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHH---------------------------H-SC
T ss_pred             CccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeC---------------------------C-CC
Confidence            3689999887667668999999999999999999876677887775543                           2 23


Q ss_pred             CCCceEecCCCCeEeec--CCCcEeCCCCCceeec
Q psy11800        130 CANGMCINMDGSFKCQC--KPGFVLSPTGHACIDV  162 (220)
Q Consensus       130 c~~~~C~~~~~~~~C~C--~~G~~~~~~g~~C~~i  162 (220)
                      |. ++|++..++|+|.|  ..||.+...+..|.+|
T Consensus        53 C~-~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~di   86 (87)
T 1z6c_A           53 CA-QLCVNYPGGYTCYCDGKKGFKLAQDQKSCEVV   86 (87)
T ss_dssp             CS-SEECCCSSSCCEECCSSSCCBCCTTSSSCBCC
T ss_pred             CC-CEEEccCCCEEEECCCCcCCcccCCCCcceEC
Confidence            43 58999999999999  5777655555556544

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.33  E-value=1.9e-12  Score=89.18  Aligned_cols=73  Identities=33%  Similarity=0.727  Sum_probs=60.6

Q ss_pred             CCCCceEecCCCCeEeecCCCcEeCCCCCceeec---CcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCC
Q psy11800        129 MCANGMCINMDGSFKCQCKPGFVLSPTGHACIDV---DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRD  205 (220)
Q Consensus       129 ~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i---~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~  205 (220)
                      +.++++|++..++|+|.|++||    .|..|.++   ++|...+..|.+ +|+++.++|.|.|++||.+..+++.|++++
T Consensus        22 C~~~g~C~~~~~~y~C~C~~G~----~G~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~   96 (114)
T 1aut_L           22 CCGHGTCIDGIGSFSCDCRSGW----EGRFCQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAV   96 (114)
T ss_dssp             TTTSEEECCCSSCCCEEECTTE----ESTTSCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEECS
T ss_pred             CCCcCCCCCCCCCcEeeCCCCC----cCCCcCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeECCCCCccCcCc
Confidence            5567899999999999999999    66778654   468765545765 999999999999999999988899998665


Q ss_pred             C
Q psy11800        206 E  206 (220)
Q Consensus       206 ~  206 (220)
                      +
T Consensus        97 ~   97 (114)
T 1aut_L           97 K   97 (114)
T ss_dssp             S
T ss_pred             c
Confidence            4

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.31  E-value=2.4e-12  Score=92.46  Aligned_cols=86  Identities=31%  Similarity=0.778  Sum_probs=63.1

Q ss_pred             CCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccC
Q psy11800         47 VSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECS  125 (220)
Q Consensus        47 ~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~  125 (220)
                      ..|.++|+|..+|  | +++.|+++.++|.|.|++||.    +..|+++++|...                         
T Consensus        43 ~~c~dideC~~~p--C~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~-------------------------   91 (146)
T 1x7a_L           43 KQYVDGDQCEPNP--CLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIK-------------------------   91 (146)
T ss_dssp             -------CCSSCS--SCTTCEEEECSSCEEEECCSSEE----STTTCEECCTTSG-------------------------
T ss_pred             ccCCCcCcCCCCC--CCCCCEeECCCCCEEEecCCCCc----CCcCCCCccccCC-------------------------
Confidence            3588999999877  9 558999999999999999998    6678766444321                         


Q ss_pred             CCCCCCCceE-ecCCCCeEeecCCCcEeCCCCCceeecCcC
Q psy11800        126 QNGMCANGMC-INMDGSFKCQCKPGFVLSPTGHACIDVDEC  165 (220)
Q Consensus       126 ~~~~c~~~~C-~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C  165 (220)
                       ...|.+ +| ++..++|+|.|++||.+..+|..|.++++.
T Consensus        92 -~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~~  130 (146)
T 1x7a_L           92 -NGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPF  130 (146)
T ss_dssp             -GGSCSS-BCCCCSSSCCCCBCCTTEEECTTSSSEEECSSS
T ss_pred             -CCCCcC-CCCCCCCCCEEeEcCCCcEeCCCCCcCCCCCCC
Confidence             123444 78 888999999999999988889999887654

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.30  E-value=1.3e-12  Score=88.84  Aligned_cols=77  Identities=35%  Similarity=0.889  Sum_probs=30.1

Q ss_pred             ccccCCC-CCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCC
Q psy11800        121 HDECSQN-GMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGG  199 (220)
Q Consensus       121 ~~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~  199 (220)
                      +++|... ..|. ++|++..++|+|.|++||.+. .+..|++||+|.. +..|. +.|+++.++|.|.|++||.+..+++
T Consensus        29 ~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~-~~~C~-~~C~n~~gsy~C~C~~Gy~~~~d~~  104 (107)
T 2w2n_E           29 TNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQD-PDTCS-QLCVNLEGGYKCQCEEGFQLDPHTK  104 (107)
T ss_dssp             CCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEE-TTTEEEC--------------------------------------
T ss_pred             CccCcCCCCCCC-CEeEeCCCCeEEECCCCcccc-CCCccccccccCC-CCCcC-CeeecCCCCEEEECCCCceECCCCC
Confidence            4666543 3343 489999999999999999775 5688999999974 23486 6999999999999999999877777


Q ss_pred             CC
Q psy11800        200 FC  201 (220)
Q Consensus       200 ~C  201 (220)
                      .|
T Consensus       105 ~C  106 (107)
T 2w2n_E          105 AC  106 (107)
T ss_dssp             --
T ss_pred             cc
Confidence            66

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.25  E-value=1.2e-12  Score=92.81  Aligned_cols=81  Identities=26%  Similarity=0.613  Sum_probs=37.0

Q ss_pred             ccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceee-c-CcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCC
Q psy11800        121 HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID-V-DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDG  198 (220)
Q Consensus       121 ~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~-i-~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g  198 (220)
                      +++|...++-++++|++..++|+|.|++||    .|..|.+ + ++|...+..|.+ .|+++.++|.|.|++||.+..+|
T Consensus        42 ~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~----~G~~C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g  116 (134)
T 2vh0_B           42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGF----EGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNG  116 (134)
T ss_dssp             -------------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTS
T ss_pred             cCcCCCCCCCCcCCcccCCCCEEeeCCCCc----cCCccccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEECCCC
Confidence            466654443345799999999999999999    6888966 6 889876556876 99999999999999999998899


Q ss_pred             CCCCcCCC
Q psy11800        199 GFCVDRDE  206 (220)
Q Consensus       199 ~~C~~~~~  206 (220)
                      +.|+++++
T Consensus       117 ~~C~~~~~  124 (134)
T 2vh0_B          117 KACIPTGP  124 (134)
T ss_dssp             SCEEESSS
T ss_pred             CccCcCCC
Confidence            99986644

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.25  E-value=1.2e-12  Score=98.01  Aligned_cols=87  Identities=25%  Similarity=0.596  Sum_probs=40.0

Q ss_pred             cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceee-c-CcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCC
Q psy11800        120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID-V-DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD  197 (220)
Q Consensus       120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~-i-~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~  197 (220)
                      ++++|..+++.++++|++..++|+|.|++||    .|..|.+ + ++|...+..|.+ .|++..++|.|.|++||.+..+
T Consensus        41 dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf----~G~~Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~l~~d  115 (195)
T 1nfu_B           41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGF----EGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADN  115 (195)
T ss_dssp             --------------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTT
T ss_pred             CCcccCCCCCCCCCEeECCCCCeeEeCCCCc----eeccccccccccccCCCCCCCC-EeECCCCCeEEECCCCceeCCC
Confidence            3467764443345799999999999999999    6889965 6 889876656876 9999999999999999999999


Q ss_pred             CCCCCcCC--CCCCCC
Q psy11800        198 GGFCVDRD--ECRTPG  211 (220)
Q Consensus       198 g~~C~~~~--~C~~~~  211 (220)
                      |+.|++++  +|....
T Consensus       116 G~~C~~~~~~PC~~~~  131 (195)
T 1nfu_B          116 GKACIPTGPYPCGKQT  131 (195)
T ss_dssp             SSCEEESSSSCTTCCC
T ss_pred             CCccccCCCCCCCCCC
Confidence            99998654  465543

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.25  E-value=1.7e-11  Score=87.79  Aligned_cols=100  Identities=24%  Similarity=0.601  Sum_probs=66.2

Q ss_pred             CcccCCCCCCCCCCCCccccccCCCCCCCCCCCCccCCCCCCC-CCCeee-------eCCCceEeeCCCCCccCCCCCCc
Q psy11800         20 PAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLIC-LNGRCD-------NTLGSYRCACQPGYSPSPDGGFC   91 (220)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~C~~i~~C~~~~~~C-~~~~C~-------~~~g~~~C~C~~g~~~~~~~~~C   91 (220)
                      .|.|.++|+|..|........    ....|.++++|..++  | +++.|+       ++.++|.|.|++||.    +..|
T Consensus        24 ~C~C~~G~~G~~C~~~~~~~~----~~~~c~~~~~C~~~~--C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~----G~~C   93 (143)
T 4d90_A           24 SCECPDGFTDPNCSSVVEVAS----DEEEPTSAGPCTPNP--CHNGGTCEISEAYRGDTFIGYVCKCPRGFN----GIHC   93 (143)
T ss_dssp             EEECCTTCCTTTTCSCCCCTT----TTTSCCCCCTTSSCC--CCTTCEEEECCCEETTEECCEEEECCTTEE----STTS
T ss_pred             EeECCCCCCCCCCccCccccc----cccccccCCcCCCCC--CCCCCEecCCCccccCCCCCeEeECcCCCc----CCCc
Confidence            355555555544443221111    123344678888776  8 568999       666789999999997    5566


Q ss_pred             c-CCCcccCCCCCCccccccccccccccccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800         92 V-DRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACI  160 (220)
Q Consensus        92 ~-~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  160 (220)
                      + ++                           ++|....+-.+++|++..++|+|.|++||    .|..|.
T Consensus        94 ~~~i---------------------------~~C~~~~C~~~~~C~~~~g~~~C~C~~G~----~G~~c~  132 (143)
T 4d90_A           94 QHNI---------------------------NECEVEPCKNGGICTDLVANYSCECPGEF----MGRNCQ  132 (143)
T ss_dssp             CEEC---------------------------CTTTTCCSCTTCEEEEETTEEEEECCTTC----BSTTSC
T ss_pred             ccCC---------------------------CcCCCCCCCCCCEeECCCCCeEeECCCCC----ccCCce
Confidence            5 44                           55544443345799999999999999999    666663

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.23  E-value=1.1e-11  Score=88.75  Aligned_cols=87  Identities=29%  Similarity=0.568  Sum_probs=66.9

Q ss_pred             ccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceee-cCcCCCC---CCCCCCCeEecCCC-CeEEeCCCCCc
Q psy11800        119 LYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID-VDECYEN---PLICLNGRCDNTLG-SYRCACQPGYS  193 (220)
Q Consensus       119 ~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~-i~~C~~~---~~~C~~~~C~~~~~-~~~C~C~~G~~  193 (220)
                      .++++|..+++-++++|++..++|+|.|++||    .|..|.+ +++|..-   .+.|.+ .|+++.+ +|.|.|++||.
T Consensus        45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~----~G~~C~~~~~~c~~c~~~~~~C~~-~C~~~~g~~y~C~C~~Gy~  119 (142)
T 2c4f_L           45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAF----EGRNCETHKDDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYS  119 (142)
T ss_dssp             TTCCGGGGCCCCTTCEEEEETTEEEEECCTTE----ESTTSCEEGGGCCSTTTGGGGCSS-EEECCTTSCCEEECCTTEE
T ss_pred             CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCc----cCCccccCccccccccCCCCCccC-EeECCCCCCEEEECCCCce
Confidence            35678865544445899999999999999999    6888965 6775322   222433 8999999 99999999999


Q ss_pred             cCCCCCCCCcCCC--CCCC
Q psy11800        194 PSPDGGFCVDRDE--CRTP  210 (220)
Q Consensus       194 ~~~~g~~C~~~~~--C~~~  210 (220)
                      +..+|+.|+++++  |...
T Consensus       120 l~~dG~~C~~~~e~pCg~~  138 (142)
T 2c4f_L          120 LLADGVSCTPTVEYPCGKI  138 (142)
T ss_dssp             ECTTSSCEEESSSSCTTCC
T ss_pred             ECCCCCCCCCCCccCCCCC
Confidence            9999999988777  5443

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=99.22  E-value=1.1e-10  Score=104.02  Aligned_cols=154  Identities=27%  Similarity=0.577  Sum_probs=101.1

Q ss_pred             cCCCCCCCCCCCCccCCCCCCCCCCeeeeCCCceEee----CCCCCccCCCCCCccCCCcccCC-------------C--
Q psy11800         41 DSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCA----CQPGYSPSPDGGFCVDRDECRTP-------------G--  101 (220)
Q Consensus        41 ~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~----C~~g~~~~~~~~~C~~~~~C~~~-------------~--  101 (220)
                      ...+++..|. ..+|....+.|.++.|++  .++.|.    |..|..    +..|.....|...             .  
T Consensus       202 ~dgsDE~~C~-~~~C~~~~f~C~~g~Ci~--~~~~Cdg~~dC~dgsd----e~~C~~~~~C~~~~~~~C~~g~Ci~~~~~  274 (699)
T 1n7d_A          202 KDKSDEENCA-VATCRPDEFQCSDGNCIH--GSRQCDREYDCKDMSD----EVGCVNVTLCEGPNKFKCHSGECITLDKV  274 (699)
T ss_dssp             TTSCSSCSCC-CCCCCSSEEESSSSCEEE--TTCCSSSCCCSSSSCS----SSSTTCCCCCCSTTCCCCTTSCCCCSSCC
T ss_pred             CCCcccccCC-CcccCCCcEecCCCceee--eecccCCCCCCCCCCc----cCCCCCCCcccCCCceecCCCcEeCCccc
Confidence            3444566664 346766555687788886  456775    554432    4445443334211             0  


Q ss_pred             CCCccccccccccccccccccccCCC-CCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecC
Q psy11800        102 DHDECSQKKKKKKKKKKLYHDECSQN-GMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNT  180 (220)
Q Consensus       102 ~~~~C~c~~~~~~~~~~~~~~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~  180 (220)
                      -.+.+.|..++.......++++|... ..|. +.|++.+++|+|.|++||.+ ..+..|.+|++|... ..|.+ .|+|+
T Consensus       275 Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~-~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~-~~C~~-~C~n~  350 (699)
T 1n7d_A          275 CNMARDCRDWSDEPIKECGTNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDP-DTCSQ-LCVNL  350 (699)
T ss_dssp             SCSSCCSSSSCSCCCSSCCCCCTTSSTTTSC-TTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSS-SSCTT-TCCBC
T ss_pred             ccccceecCcccccccccccccccccccCcC-CCcccCCCCcEEeCCCCeEc-CCCCcccCccccCCC-Ccccc-ccccC
Confidence            01223344444333333356777643 3343 47999999999999999977 468899999999743 34864 89999


Q ss_pred             CCCeEEeCCCCCccCCCCCCCCcCC
Q psy11800        181 LGSYRCACQPGYSPSPDGGFCVDRD  205 (220)
Q Consensus       181 ~~~~~C~C~~G~~~~~~g~~C~~~~  205 (220)
                      .++|.|.|++||.+..+++.|+.+.
T Consensus       351 ~g~y~C~C~~G~~~~~~~~~C~~~~  375 (699)
T 1n7d_A          351 EGGYKCQCEEGFQLDPHTKACKAVG  375 (699)
T ss_dssp             SSCBCCCCCSSCBCCSSCCCCBCCS
T ss_pred             CCCeeeeeecccccCCCCCcccccc
Confidence            9999999999999988888897653

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.22  E-value=1.2e-11  Score=100.14  Aligned_cols=147  Identities=23%  Similarity=0.519  Sum_probs=57.9

Q ss_pred             CCCCCCCCCCCccccccCCCCCCCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCC-----CCccCCCccc
Q psy11800         25 STYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDG-----GFCVDRDECR   98 (220)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~g~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~-----~~C~~~~~C~   98 (220)
                      +...++.|...+.+.|..+|.|..|+. +.|.. +  | +++.|++   .+.|.|++||.+....     ..|.+...|.
T Consensus       154 ~C~~~G~C~~~~~C~C~~G~~G~~C~~-~~C~~-~--C~~~G~C~~---~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~  226 (324)
T 2ygq_A          154 GCRNGGFCNERRICECPDGFHGPHCEK-ALCTP-R--CMNGGLCVT---PGFCICPPGFYGVNCDKANCSTTCFNGGTCF  226 (324)
T ss_dssp             CCCSSCEECTTSCEECCTTEESSSSCE-ESSSS-C--CCTTCEECS---SCCEECCTTCBTTTTCBCCCSSCCCSSCCBS
T ss_pred             CCCCCCEECCCCeEECCCCCcCCCCCC-CCCCC-C--CCCCCEEcC---CCEEeCCCCccCCCcccCcCCCCCCCCCeeC
Confidence            344445555568888999999999975 56763 3  8 6699975   4789999999954321     1222223333


Q ss_pred             CCCCCCccccccccccccccccccccCCCCCC-CCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-Ce
Q psy11800         99 TPGDHDECSQKKKKKKKKKKLYHDECSQNGMC-ANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GR  176 (220)
Q Consensus        99 ~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c-~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~  176 (220)
                      .   .+.|.|.+||+|..|+.  +.|.  ..| ++++|+.   .++|.|.+||    .|..|. ++.|. .  .|.+ ++
T Consensus       227 ~---~~~C~C~~G~~G~~C~~--~~C~--~~C~~~g~C~~---~~~C~C~~G~----~G~~C~-~~~C~-~--~C~~~g~  288 (324)
T 2ygq_A          227 Y---PGKCICPPGLEGEQCEI--SKCP--QPCRNGGKCIG---KSKCKCSKGY----QGDLCS-KPVCE-P--GCGAHGT  288 (324)
T ss_dssp             C---SSCBCCCTTCCTTTTC------------------------------------------------------------
T ss_pred             C---CCeeeCCCCccCCCCCc--CcCC--CcCCCCCEECC---CCEEECCCCC----cCCCCc-CCCCC-C--CCCCCCE
Confidence            2   47899999999999874  4563  334 3478874   4699999999    677885 45675 2  3864 88


Q ss_pred             EecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        177 CDNTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       177 C~~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      |++   .+.|.|.+||.    |..|+.
T Consensus       289 C~~---~~~C~C~~G~~----G~~C~~  308 (324)
T 2ygq_A          289 CHE---PNKCQCQEGWH----GRHCNK  308 (324)
T ss_dssp             ---------------------------
T ss_pred             ECC---CCEeECCCCCc----CCCCCC
Confidence            986   47899999999    888864

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.19  E-value=5e-12  Score=85.89  Aligned_cols=86  Identities=34%  Similarity=0.799  Sum_probs=36.9

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCcccccccccccccccccc
Q psy11800         43 LSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHD  122 (220)
Q Consensus        43 ~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~  122 (220)
                      +|.+..| ++++|..++..|. ..|+++.++|.|.|++||.+. ++..|+++++|.                        
T Consensus        21 ~~~~~~C-d~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~------------------------   73 (107)
T 2w2n_E           21 LYFQGAM-GTNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQ------------------------   73 (107)
T ss_dssp             CCCSCCB-SCCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEE-TTTEEEC-----------------------------
T ss_pred             CcCCCCC-cCccCcCCCCCCC-CEeEeCCCCeEEECCCCcccc-CCCccccccccC------------------------
Confidence            4446677 6799986555574 599999999999999999963 356777765443                        


Q ss_pred             ccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCce
Q psy11800        123 ECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC  159 (220)
Q Consensus       123 ~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C  159 (220)
                         ....|. ++|++..++|+|.|++||.+...++.|
T Consensus        74 ---~~~~C~-~~C~n~~gsy~C~C~~Gy~~~~d~~~C  106 (107)
T 2w2n_E           74 ---DPDTCS-QLCVNLEGGYKCQCEEGFQLDPHTKAC  106 (107)
T ss_dssp             -------------------------------------
T ss_pred             ---CCCCcC-CeeecCCCCEEEECCCCceECCCCCcc
Confidence               223343 589999999999999999876655554

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.19  E-value=4.4e-11  Score=85.52  Aligned_cols=85  Identities=33%  Similarity=0.813  Sum_probs=64.5

Q ss_pred             CCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-CCcccCCCCCCccccccccccccccccccccC-
Q psy11800         49 DLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-RDECRTPGDHDECSQKKKKKKKKKKLYHDECS-  125 (220)
Q Consensus        49 C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~-  125 (220)
                      |.++++|..+|  | ++++|+++.++|.|.|++||.    +..|+. +++|..                        |. 
T Consensus        44 c~did~C~~~p--C~n~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~------------------------c~~   93 (142)
T 2c4f_L           44 YSDGDQCASSP--CQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLI------------------------CVN   93 (142)
T ss_dssp             HTTCCGGGGCC--CCTTCEEEEETTEEEEECCTTEE----STTSCEEGGGCCS------------------------TTT
T ss_pred             CCccCcCcCCC--cCCCCEEeCCCCCEEeeCCCCcc----CCccccCcccccc------------------------ccC
Confidence            57899999877  9 558999999999999999998    566764 222211                        11 


Q ss_pred             CCCCCCCceEecCCC-CeEeecCCCcEeCCCCCceeecCc
Q psy11800        126 QNGMCANGMCINMDG-SFKCQCKPGFVLSPTGHACIDVDE  164 (220)
Q Consensus       126 ~~~~c~~~~C~~~~~-~~~C~C~~G~~~~~~g~~C~~i~~  164 (220)
                      .+..|.+ +|++..+ +|+|.|++||.+..++..|.++++
T Consensus        94 ~~~~C~~-~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e  132 (142)
T 2c4f_L           94 ENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE  132 (142)
T ss_dssp             GGGGCSS-EEECCTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred             CCCCccC-EeECCCCCCEEEECCCCceECCCCCCCCCCCc
Confidence            1122322 8999998 999999999998888999987765

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=99.19  E-value=4.6e-11  Score=107.40  Aligned_cols=99  Identities=28%  Similarity=0.665  Sum_probs=74.4

Q ss_pred             ccccccccccccccccccccCCC-CCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCC
Q psy11800        105 ECSQKKKKKKKKKKLYHDECSQN-GMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGS  183 (220)
Q Consensus       105 ~C~c~~~~~~~~~~~~~~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~  183 (220)
                      .+.|..++......-.+++|... ..|. ..|++.+++|+|.|++||.+ ..+..|.+|++|. .+..|.+ .|+|+.++
T Consensus       296 ~~dC~dgsDe~~~~C~~~~C~~~~~~C~-~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~-~~~~C~~-~C~n~~gs  371 (791)
T 3m0c_C          296 ARDCRDWSDEPIKECGTNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ-DPDTCSQ-LCVNLEGG  371 (791)
T ss_dssp             SCCSSSSCSCCCTTBSCCSTTTGGGGCS-SEEEECSBSEEEECCTTCEE-ETTTEEECCCCCS-SSSSCTT-TCCBCSSC
T ss_pred             ccccccccCccccccccccccccccCcc-ccccCCCCCcccCCCCCCcc-CCCCccccCcccC-CCCCCCC-eeecCCCC
Confidence            33444444333322234666543 2333 38999999999999999988 4789999999998 3445764 89999999


Q ss_pred             eEEeCCCCCccCCCCCCCCcCCCC
Q psy11800        184 YRCACQPGYSPSPDGGFCVDRDEC  207 (220)
Q Consensus       184 ~~C~C~~G~~~~~~g~~C~~~~~C  207 (220)
                      |.|.|++||.+.++++.|+.++++
T Consensus       372 y~C~C~~Gy~l~~~~~~C~~~~~~  395 (791)
T 3m0c_C          372 YKCQCEEGFQLDPHTKACKAVGSI  395 (791)
T ss_dssp             BCCCCCSSEECCSSCCCCEETTSC
T ss_pred             ceeecCCCCEeCCCCceeeecccc
Confidence            999999999998899999887765

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.18  E-value=8.9e-13  Score=96.53  Aligned_cols=122  Identities=25%  Similarity=0.458  Sum_probs=87.0

Q ss_pred             CCCCccccccCCCC----CCCCCCCCc--cCCCCCCC---CCCeeeeCCC----ceEeeCCCCCccCCCCCCccCCCccc
Q psy11800         32 ETQTYTGLSDSLSL----GVSDLNVDE--CYENPLIC---LNGRCDNTLG----SYRCACQPGYSPSPDGGFCVDRDECR   98 (220)
Q Consensus        32 ~~~~~~~~~~~~~~----g~~C~~i~~--C~~~~~~C---~~~~C~~~~g----~~~C~C~~g~~~~~~~~~C~~~~~C~   98 (220)
                      ....|.+.+..+|.    |..|+++++  |...+..|   .++.|++..+    +|.|.|++||..   +..|+   .|.
T Consensus        20 ~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~---~~~C~---~C~   93 (162)
T 1uzk_A           20 TPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAW---GTPCE---MCP   93 (162)
T ss_dssp             ETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEE---TTTTE---ECC
T ss_pred             CCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCc---CCCcc---cCC
Confidence            33457788888886    889988887  87644334   3578998876    799999999985   34454   233


Q ss_pred             C-CCCCCcccccc--ccccc---cccccccccCCC-CCCCCceEecCCCCeEeecCCCcEeCCCCCce
Q psy11800         99 T-PGDHDECSQKK--KKKKK---KKKLYHDECSQN-GMCANGMCINMDGSFKCQCKPGFVLSPTGHAC  159 (220)
Q Consensus        99 ~-~~~~~~C~c~~--~~~~~---~~~~~~~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C  159 (220)
                      . ....+.|.|..  ||.+.   .+++++|+|... ..|.+++|+++.++|+|.|++||.+..+++.|
T Consensus        94 ~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C  161 (162)
T 1uzk_A           94 AVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC  161 (162)
T ss_dssp             CTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred             CCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCcc
Confidence            2 22457888877  88875   466789999754 45667899999999999999999887777665

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.17  E-value=7.7e-15  Score=114.17  Aligned_cols=149  Identities=12%  Similarity=0.061  Sum_probs=88.1

Q ss_pred             CCCC-CCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-CCcccCC--CCCCccccccc-cccccccc
Q psy11800         46 GVSD-LNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-RDECRTP--GDHDECSQKKK-KKKKKKKL  119 (220)
Q Consensus        46 g~~C-~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~~~C~~~--~~~~~C~c~~~-~~~~~~~~  119 (220)
                      |.++ +++.++.. +  | ++++|++..++|.|.|++||++    ..|+. +++|...  .....|..... +.|.++..
T Consensus        26 g~~~~~n~~~~~~-~--c~ngG~C~~g~~~y~C~Cp~Gf~G----~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~   98 (267)
T 4fbr_A           26 GARDKQNVVALDI-K--SDDGGKTLKGTMTYNGEGPIGFRG----TLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQ   98 (267)
T ss_dssp             CCCSSCCEEEEEE-E--CSSTTSEEEEEEEETTSCCEEEEE----EECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSC
T ss_pred             ccccccccccCCC-C--cCCCCeecCCCCCeEEeCCCCccc----ccccccccccccccCcCCCcccCCCeeeccCcccc
Confidence            5555 44555554 2  5 6799999999999999999984    44432 2332211  11112222111 23444443


Q ss_pred             cccccCCCCCCCCceEecCCCCeEeecCCCcEeCC--------------------------CCCceeecCcCCCCCCCCC
Q psy11800        120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSP--------------------------TGHACIDVDECYENPLICL  173 (220)
Q Consensus       120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~--------------------------~g~~C~~i~~C~~~~~~C~  173 (220)
                      . ++|...++.++++|++...+|+|+|+.||++..                          .+.+|.....|...+  |.
T Consensus        99 ~-~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~--c~  175 (267)
T 4fbr_A           99 N-IVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAK--SN  175 (267)
T ss_dssp             C-EEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEE--CS
T ss_pred             c-cccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCC--CC
Confidence            3 466555555557777777777888888874321                          111121111122222  66


Q ss_pred             C-CeEecCCCCeEEeCCCCCccCCCCCCCC-cCCCCC
Q psy11800        174 N-GRCDNTLGSYRCACQPGYSPSPDGGFCV-DRDECR  208 (220)
Q Consensus       174 ~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~-~~~~C~  208 (220)
                      + ++|++...+|.|.|++||+    |..|+ ++++|.
T Consensus       176 ngg~C~dg~~~y~C~Cp~Gf~----G~~c~~~i~ec~  208 (267)
T 4fbr_A          176 DGGKTLSGTMTYNGEGPIGFR----GTLTSPDTYTVE  208 (267)
T ss_dssp             STTSEEEEEEEETTSCCEEEE----EEEEETTEEEEE
T ss_pred             CCCEeeCCCCCeEEeCCCCcc----ccccccccceec
Confidence            5 7899988999999999999    88886 566643

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.15  E-value=7.1e-11  Score=81.23  Aligned_cols=86  Identities=30%  Similarity=0.782  Sum_probs=60.6

Q ss_pred             CCCCCccCCCC------CCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccc
Q psy11800         49 DLNVDECYENP------LIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYH  121 (220)
Q Consensus        49 C~~i~~C~~~~------~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~  121 (220)
                      +.|+|+|..+|      +.| ++++|+++.++|+|.|++||+    +..|+++.+                        +
T Consensus         3 ~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~----G~~C~~~~~------------------------~   54 (114)
T 1aut_L            3 HVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWE----GRFCQREVS------------------------F   54 (114)
T ss_dssp             -----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEE----STTSCEECC------------------------S
T ss_pred             ceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCc----CCCcCcCCc------------------------C
Confidence            45677888766      446 668999999999999999998    445654311                        1


Q ss_pred             cccCCC-CCCCCceEecCCCCeEeecCCCcEeCCCCCceeecC
Q psy11800        122 DECSQN-GMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVD  163 (220)
Q Consensus       122 ~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~  163 (220)
                      ++|... ..|.+ +|++..++|+|.|++||.+...++.|.++.
T Consensus        55 ~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~   96 (114)
T 1aut_L           55 LNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAV   96 (114)
T ss_dssp             SSSSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEECS
T ss_pred             CcCcCCCCCCCC-EeECCCCCEEeECCCCeeECCCCCccCcCc
Confidence            344432 23433 899999999999999999988899997654

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.15  E-value=1.9e-11  Score=86.58  Aligned_cols=85  Identities=33%  Similarity=0.812  Sum_probs=31.2

Q ss_pred             CCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-C-CcccCCCCCCccccccccccccccccccc
Q psy11800         47 VSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-R-DECRTPGDHDECSQKKKKKKKKKKLYHDE  123 (220)
Q Consensus        47 ~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~-~~C~~~~~~~~C~c~~~~~~~~~~~~~~~  123 (220)
                      ..|.++++|..+|  | ++++|+++.++|.|.|++||.    +..|.. + ++|...                       
T Consensus        37 ~~c~d~d~C~~~p--C~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~i~d~C~~~-----------------------   87 (134)
T 2vh0_B           37 NKYKDGDQCETSP--CQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLD-----------------------   87 (134)
T ss_dssp             --------------------------------------------------CCGGGTG-----------------------
T ss_pred             ccCCCcCcCCCCC--CCCcCCcccCCCCEEeeCCCCcc----CCccccCCCCccccC-----------------------
Confidence            3588999999877  9 558999999999999999998    566765 3 334321                       


Q ss_pred             cCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCc
Q psy11800        124 CSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDE  164 (220)
Q Consensus       124 C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~  164 (220)
                         ...|.+ +|++..++|+|.|++||.+..++..|.++++
T Consensus        88 ---~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~~  124 (134)
T 2vh0_B           88 ---NGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGP  124 (134)
T ss_dssp             ---GGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred             ---CCCCCC-EeECCCCCEEEECCCCcEECCCCCccCcCCC
Confidence               123444 8999999999999999998878999977643

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.14  E-value=5.8e-11  Score=96.00  Aligned_cols=86  Identities=29%  Similarity=0.643  Sum_probs=71.1

Q ss_pred             cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCcee-ecCcCCCC-CCCCCCCeEecCCCCeEEeCCCCCccCCC
Q psy11800        120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACI-DVDECYEN-PLICLNGRCDNTLGSYRCACQPGYSPSPD  197 (220)
Q Consensus       120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~-~i~~C~~~-~~~C~~~~C~~~~~~~~C~C~~G~~~~~~  197 (220)
                      ++++|..+++-++++|++..++|+|.|++||    .|..|. ++++|... ...|.+ .|+++.++|.|.|++||.+..+
T Consensus         4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~----~g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~~~   78 (317)
T 3h5c_B            4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGY----EGSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGED   78 (317)
T ss_dssp             --CCTTSCCCTTTCCCCCCSSSCCCCCSSSC----CSSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEECCTT
T ss_pred             cCCcCCCCCCCCCCEeECCCCCeEEECCCCC----cCCccccCcccCCCCCCCCCcC-ccccCCCeeEEecccccccccc
Confidence            3467766554455899999999999999999    788996 99999872 245987 9999999999999999998888


Q ss_pred             CCCCCcCCCCCCC
Q psy11800        198 GGFCVDRDECRTP  210 (220)
Q Consensus       198 g~~C~~~~~C~~~  210 (220)
                      +..|.++++|...
T Consensus        79 ~~~C~~~~~c~cg   91 (317)
T 3h5c_B           79 HKQCVPHDQCACG   91 (317)
T ss_dssp             SSCCEECSSCCCC
T ss_pred             ccccccccccccc
Confidence            8999999888543

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.14  E-value=2.1e-11  Score=91.29  Aligned_cols=83  Identities=34%  Similarity=0.843  Sum_probs=31.2

Q ss_pred             CCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-C-CcccCCCCCCcccccccccccccccccccc
Q psy11800         48 SDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-R-DECRTPGDHDECSQKKKKKKKKKKLYHDEC  124 (220)
Q Consensus        48 ~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~-~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C  124 (220)
                      .|.++++|..+|  | +++.|++..++|.|.|++||.    +..|.. + ++|...                        
T Consensus        38 ~c~dideC~~~p--C~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~~i~deC~~~------------------------   87 (195)
T 1nfu_B           38 KYKDGDQCETSP--CQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLD------------------------   87 (195)
T ss_dssp             -------------------------------------------------CCGGGTG------------------------
T ss_pred             cCCCCcccCCCC--CCCCCEeECCCCCeeEeCCCCce----eccccccccccccCC------------------------
Confidence            588999999877  9 558999999999999999998    566765 3 344321                        


Q ss_pred             CCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecC
Q psy11800        125 SQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVD  163 (220)
Q Consensus       125 ~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~  163 (220)
                        ...|.+ +|++..++|+|.|++||.+..+|..|.+++
T Consensus        88 --~~~C~~-~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~  123 (195)
T 1nfu_B           88 --NGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTG  123 (195)
T ss_dssp             --GGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred             --CCCCCC-EeECCCCCeEEECCCCceeCCCCCccccCC
Confidence              123444 899999999999999999887899997764

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.13  E-value=7.6e-14  Score=108.58  Aligned_cols=138  Identities=12%  Similarity=0.051  Sum_probs=85.1

Q ss_pred             CCCCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-CCcccCCC--CCCccc-cccccccccccc
Q psy11800         45 LGVSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-RDECRTPG--DHDECS-QKKKKKKKKKKL  119 (220)
Q Consensus        45 ~g~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~~~C~~~~--~~~~C~-c~~~~~~~~~~~  119 (220)
                      .|..|+++++|.+.|  | +.++|++...+|+|.|+.||++    ..|+. +++|....  ....|. +...+.|.++.+
T Consensus        92 ~G~~c~~~~eC~s~p--C~ngG~C~~~~~sy~C~C~~Gf~G----~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~  165 (267)
T 4fbr_A           92 LGARDKQNIVAVSIK--SNDGGKTLTGTTTYNGEGPIGFKS----EVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQ  165 (267)
T ss_dssp             CCCCSSCCEEEEEEE--CSSTTSEEEEEEEETTSCCEEEEE----EECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTS
T ss_pred             ccCccccccccCCCC--CCCCCEEecCCccEEeeCCCCccc----cCCCCCcccccccCCcCCccccCCcceeccccccc
Confidence            477787777888877  8 5699999999999999999984    44543 23332221  111222 122344666666


Q ss_pred             cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCce-eecCcCC------CCC---------------------CC
Q psy11800        120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECY------ENP---------------------LI  171 (220)
Q Consensus       120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C-~~i~~C~------~~~---------------------~~  171 (220)
                      .++.+ ..++.++++|++...+|+|+|++||    .+..| .++++|.      ..+                     ..
T Consensus       166 ~i~c~-~~~c~ngg~C~dg~~~y~C~Cp~Gf----~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~  240 (267)
T 4fbr_A          166 NVINV-DAKSNDGGKTLSGTMTYNGEGPIGF----RGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVA  240 (267)
T ss_dssp             CEEEE-EEECSSTTSEEEEEEEETTSCCEEE----EEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEE
T ss_pred             ccccC-CCCCCCCCEeeCCCCCeEEeCCCCc----cccccccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcC
Confidence            55432 3445566788888888899999998    44566 3334321      111                     02


Q ss_pred             CCC-CeEecCCCCeEEeCCCCCc
Q psy11800        172 CLN-GRCDNTLGSYRCACQPGYS  193 (220)
Q Consensus       172 C~~-~~C~~~~~~~~C~C~~G~~  193 (220)
                      |.+ ++|++...+|.|.|+.||+
T Consensus       241 c~ngGtC~dg~~sy~CeCp~GF~  263 (267)
T 4fbr_A          241 SSDGGKTLAGTMIYNGEGPIGFR  263 (267)
T ss_dssp             CSSTTSEEEEEEEETTSCCEEEE
T ss_pred             CCCCCEeeCCCcceeecCCCCcc
Confidence            343 5666666667777777775

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=99.10  E-value=1.8e-10  Score=96.02  Aligned_cols=71  Identities=31%  Similarity=0.802  Sum_probs=62.0

Q ss_pred             CceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCC
Q psy11800        132 NGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRD  205 (220)
Q Consensus       132 ~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~  205 (220)
                      .+.|++.+++|.|.|++||.+ ..+..|.++|||.. +..|.+ .|+|+.++|.|.|.+||.+..+++.|+.++
T Consensus        11 ~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~-~~~C~~-~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~   81 (400)
T 3p5b_L           11 SHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD-PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVG   81 (400)
T ss_dssp             SSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCST-TSSCSS-CCBCCSSSCBCCCCTTCCCCTTTSSCCCST
T ss_pred             CCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhc-cCCCCC-ccCCCccceeeeccccccccccccceeecc
Confidence            358999999999999999988 46889999999984 345876 899999999999999999988888897654

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.09  E-value=2.3e-10  Score=100.68  Aligned_cols=128  Identities=32%  Similarity=0.725  Sum_probs=91.1

Q ss_pred             ccCCCCCCC-CCCeeeeCCCceE---eeCCCCCccCCCCCCccCC---------CcccCC---------C--CCCccccc
Q psy11800         54 ECYENPLIC-LNGRCDNTLGSYR---CACQPGYSPSPDGGFCVDR---------DECRTP---------G--DHDECSQK  109 (220)
Q Consensus        54 ~C~~~~~~C-~~~~C~~~~g~~~---C~C~~g~~~~~~~~~C~~~---------~~C~~~---------~--~~~~C~c~  109 (220)
                      +|..+|  | +.+.|.+..|.|.   |.|.+||.+.    .|+..         ++|...         +  ..+.|.|.
T Consensus       436 ~C~~~p--c~n~~~C~~g~G~~~~G~C~C~~Gy~G~----~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~g~C~C~  509 (690)
T 3fcs_B          436 ACQAQA--EPNSHRCNNGNGTFECGVCRCGPGWLGS----QCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCH  509 (690)
T ss_dssp             GGGTTC--CTTCTTTTTTSEEEETTEEEECTTCCSS----SSCCSCC------CCCCSSSSSSCGGGGSEEECSSSEEEC
T ss_pred             CCcCCC--CCCCCcccCCCCeEeCCceEeCCCccCC----ceeeccCccCCccCCcCCCCCCCCCCCCCCEEECCeeEee
Confidence            566666  7 4478887777887   9999999853    34211         234321         1  23678898


Q ss_pred             ----cccccccccccccccCCC--CCCC-CceEecCCCCeEeecCCCcEeCCCCCcee---ecCcCCCCC-CCCCC-CeE
Q psy11800        110 ----KKKKKKKKKLYHDECSQN--GMCA-NGMCINMDGSFKCQCKPGFVLSPTGHACI---DVDECYENP-LICLN-GRC  177 (220)
Q Consensus       110 ----~~~~~~~~~~~~~~C~~~--~~c~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~---~i~~C~~~~-~~C~~-~~C  177 (220)
                          .+|+|..|+.+++.|...  ..|. +|+|.+    ++|.|.+||    .|..|.   ++++|.... ..|.+ |.|
T Consensus       510 ~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy----~G~~CeC~~~~~~C~~~~g~~C~~~G~C  581 (690)
T 3fcs_B          510 SSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDW----TGYYCNCTTRTDTCMSSNGLLCSGRGKC  581 (690)
T ss_dssp             CCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTE----ESSSSCEECCCTTTBCTTSSBTSSSCEE
T ss_pred             cCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCC----cCCCCccCCCCCcccCCCCCCCCCCCEE
Confidence                999999998888888743  3454 578976    589999999    667774   577887532 35875 899


Q ss_pred             ecCCCCeEEeC-CCCCccCCCCCCCCc
Q psy11800        178 DNTLGSYRCAC-QPGYSPSPDGGFCVD  203 (220)
Q Consensus       178 ~~~~~~~~C~C-~~G~~~~~~g~~C~~  203 (220)
                      ++.    .|.| .+||.    |..|+.
T Consensus       582 ~~g----~C~C~~~Gy~----G~~Ce~  600 (690)
T 3fcs_B          582 ECG----SCVCIQPGSY----GDTCEK  600 (690)
T ss_dssp             ETT----EEECCSTTCB----STTSCB
T ss_pred             eCC----EEECCCCCcc----CCCcCc
Confidence            762    7999 99998    888875

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=99.05  E-value=3.2e-11  Score=100.16  Aligned_cols=83  Identities=34%  Similarity=0.843  Sum_probs=25.7

Q ss_pred             ccccCCCC-CCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCC
Q psy11800        121 HDECSQNG-MCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGG  199 (220)
Q Consensus       121 ~~~C~~~~-~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~  199 (220)
                      +|+|...+ .|.+ .|.+..++|+|.|++||++.+++..|.++++|.. ...|.+ .|+++.++|.|.|++||.+.++++
T Consensus         3 ~~~C~~~~~~c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~-~~~C~~-~C~~~~g~~~C~C~~g~~l~~d~~   79 (386)
T 3v65_B            3 EENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAE-EGYCSQ-GCTNSEGAFQCWCEAGYELRPDRR   79 (386)
T ss_dssp             ---------------------------------------------------CCTT-EEC-----CCEECCTTEEECTTSS
T ss_pred             cCcccCCCCCCCC-CCcCCCCCcEeECCCCceECCCCCccCccceeCC-cCcccC-cCCCCCCCCeEEECCCceEcCCCC
Confidence            46775443 3444 7888888999999999988778999999999973 335876 599999999999999999988999


Q ss_pred             CCCcCCC
Q psy11800        200 FCVDRDE  206 (220)
Q Consensus       200 ~C~~~~~  206 (220)
                      .|+.+++
T Consensus        80 ~C~~~~~   86 (386)
T 3v65_B           80 SCKALGP   86 (386)
T ss_dssp             CEEECSS
T ss_pred             eECCccc
Confidence            9976544

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.01  E-value=6.6e-10  Score=89.77  Aligned_cols=83  Identities=31%  Similarity=0.912  Sum_probs=65.9

Q ss_pred             CCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCcc-CCCcccCCCCCCccccccccccccccccccccCC-
Q psy11800         50 LNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCV-DRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQ-  126 (220)
Q Consensus        50 ~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~-~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~-  126 (220)
                      .++++|..+|  | +++.|++..++|.|.|++||.    +..|+ +++                           +|.. 
T Consensus         3 ~d~~~C~~~p--C~~~g~C~~~~~~~~C~C~~g~~----g~~C~~~~~---------------------------eC~~~   49 (317)
T 3h5c_B            3 KGGSPCISQP--CLHNGSCQDSIWGYTCTCSPGYE----GSNCELAKN---------------------------ECHPE   49 (317)
T ss_dssp             ---CCTTSCC--CTTTCCCCCCSSSCCCCCSSSCC----SSSSCCCSS---------------------------SCCTT
T ss_pred             ccCCcCCCCC--CCCCCEeECCCCCeEEECCCCCc----CCccccCcc---------------------------cCCCC
Confidence            3678999888  9 568999999999999999998    56776 554                           4443 


Q ss_pred             -CCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCC
Q psy11800        127 -NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECY  166 (220)
Q Consensus       127 -~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~  166 (220)
                       ...|.+ .|++..++|+|.|++||.+...+..|.++++|.
T Consensus        50 ~~~~C~~-~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c~   89 (317)
T 3h5c_B           50 RTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA   89 (317)
T ss_dssp             CTTSCSS-EEECCSSSCEEECCTTEECCTTSSCCEECSSCC
T ss_pred             CCCCCcC-ccccCCCeeEEeccccccccccccccccccccc
Confidence             245655 899999999999999999887888998888874

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=99.00  E-value=1.2e-10  Score=96.62  Aligned_cols=85  Identities=32%  Similarity=0.839  Sum_probs=23.9

Q ss_pred             CCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCC
Q psy11800         51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMC  130 (220)
Q Consensus        51 ~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c  130 (220)
                      ++|+|..++..|.+ .|.+..++|.|.|++||.+..+++.|.++++|.                           ....|
T Consensus         2 ~~~~C~~~~~~c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~---------------------------~~~~C   53 (386)
T 3v65_B            2 GEENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECA---------------------------EEGYC   53 (386)
T ss_dssp             ------------------------------------------------------------------------------CC
T ss_pred             CcCcccCCCCCCCC-CCcCCCCCcEeECCCCceECCCCCccCccceeC---------------------------CcCcc
Confidence            68899988766754 898889999999999999877788898775553                           23345


Q ss_pred             CCceEecCCCCeEeecCCCcEeCCCCCceeecCc
Q psy11800        131 ANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDE  164 (220)
Q Consensus       131 ~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~  164 (220)
                      .+ .|++..++|+|.|.+||.+.++++.|..+++
T Consensus        54 ~~-~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~~   86 (386)
T 3v65_B           54 SQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALGP   86 (386)
T ss_dssp             TT-EEC-----CCEECCTTEEECTTSSCEEECSS
T ss_pred             cC-cCCCCCCCCeEEECCCceEcCCCCeECCccc
Confidence            44 4999999999999999999888899976543

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.98  E-value=4.3e-10  Score=74.04  Aligned_cols=81  Identities=21%  Similarity=0.459  Sum_probs=58.6

Q ss_pred             ceEeeCCCCCccCCCCCCccCCCcc-----cCCCCCCcccccccccccccc-ccccccCCCCCCCCceEecCC--CCeEe
Q psy11800         73 SYRCACQPGYSPSPDGGFCVDRDEC-----RTPGDHDECSQKKKKKKKKKK-LYHDECSQNGMCANGMCINMD--GSFKC  144 (220)
Q Consensus        73 ~~~C~C~~g~~~~~~~~~C~~~~~C-----~~~~~~~~C~c~~~~~~~~~~-~~~~~C~~~~~c~~~~C~~~~--~~~~C  144 (220)
                      +|.|.|.+||.+    ..|. +++|     ......+.|.|.++|.  .|+ .++++|...++-++++|++..  ++|+|
T Consensus         1 sy~C~C~~g~~g----~~c~-~~~c~~~pC~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C   73 (91)
T 1tpg_A            1 SYQVICRDEKTQ----MIYQ-QHQSWLRPVLRSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVC   73 (91)
T ss_dssp             CCCCCCBCSSSC----CBCC-SSCEEEEECSSSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEE
T ss_pred             CeeeECCCCCcC----CeEC-CCcccCCccccCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEe
Confidence            478888888873    4453 4443     3344567888888887  666 577899765544558999887  88999


Q ss_pred             ecCCCcEeCCCCCcee-ecCc
Q psy11800        145 QCKPGFVLSPTGHACI-DVDE  164 (220)
Q Consensus       145 ~C~~G~~~~~~g~~C~-~i~~  164 (220)
                      .|++||    .|..|. +|++
T Consensus        74 ~C~~G~----~G~~Ce~~ide   90 (91)
T 1tpg_A           74 QCPEGF----AGKSCEIDTRA   90 (91)
T ss_dssp             ECCTTC----BSSSCCBCSSC
T ss_pred             ECCCCC----cCCcCCcCCCC
Confidence            999999    788883 5654

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.93  E-value=2.7e-10  Score=78.77  Aligned_cols=81  Identities=32%  Similarity=0.730  Sum_probs=57.8

Q ss_pred             cccccCCCCCCCCceEecC-CCCeEeecCCCcEeCCC-CCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCC
Q psy11800        120 YHDECSQNGMCANGMCINM-DGSFKCQCKPGFVLSPT-GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD  197 (220)
Q Consensus       120 ~~~~C~~~~~c~~~~C~~~-~~~~~C~C~~G~~~~~~-g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~  197 (220)
                      ++|+|.. ..|.+ +|++. .++|+|.|++||.+... ...|.+  +|...+  |. +.|++ .++|.|.|++||.+.. 
T Consensus         3 dideC~~-~pC~~-~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~--~C~~~~--C~-~~C~~-~~~y~C~C~~Gy~~~~-   73 (118)
T 1dx5_I            3 PVDPCFR-ANCEY-QCQPLDQTSYLCVCAEGFAPIPHEPHRCQM--FCNQTA--CP-ADCDP-NTQASCECPEGYILDD-   73 (118)
T ss_dssp             CCCGGGG-CCCSS-EEEECSSSCEEEECCTTEEEETTEEEEEEE--CCCSSE--EE-CEECT-TSTTCEECCTTEEEET-
T ss_pred             ccccCCC-CCCCC-CCCCCCCCCEEeECCCCccccCCCCCcccc--ccCCCC--CC-CcccC-CCCeEeECCCCccCCC-
Confidence            4577743 34544 99999 89999999999977532 112322  243333  54 57888 5889999999998755 


Q ss_pred             CCCCCcCCCCCC
Q psy11800        198 GGFCVDRDECRT  209 (220)
Q Consensus       198 g~~C~~~~~C~~  209 (220)
                      ++.|++|+||+.
T Consensus        74 g~~C~dideC~~   85 (118)
T 1dx5_I           74 GFICTDIDECEN   85 (118)
T ss_dssp             TTEEEECCHHHH
T ss_pred             CCccccccccCC
Confidence            788999999876

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.87  E-value=8.8e-09  Score=90.75  Aligned_cols=129  Identities=25%  Similarity=0.523  Sum_probs=89.6

Q ss_pred             ccccCCCCCCCCC-CC--------CccCCCC--CCC-CCCeeeeCCCceEeeCC----CCCccCCCCCCcc-CCCcccC-
Q psy11800         38 GLSDSLSLGVSDL-NV--------DECYENP--LIC-LNGRCDNTLGSYRCACQ----PGYSPSPDGGFCV-DRDECRT-   99 (220)
Q Consensus        38 ~~~~~~~~g~~C~-~i--------~~C~~~~--~~C-~~~~C~~~~g~~~C~C~----~g~~~~~~~~~C~-~~~~C~~-   99 (220)
                      |.|..+|.|..|+ .+        ++|...+  ..| .+|.|++    +.|.|.    +||.    |..|+ +...|.. 
T Consensus       460 C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~----G~~Ce~~~~~C~~~  531 (690)
T 3fcs_B          460 CRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSSDFGKIT----GKYCECDDFSCVRY  531 (690)
T ss_dssp             EEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCCSSCCCB----STTSCBCSSCCCBS
T ss_pred             eEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCCee----CCCcCcccCcCcCC
Confidence            6778888888884 33        5687533  248 6689974    579999    9998    44554 2333432 


Q ss_pred             -------CC--CCCcccccccccccccc--ccccccCCC--CCCC-CceEecCCCCeEeec-CCCcEeCCCCCceeecCc
Q psy11800        100 -------PG--DHDECSQKKKKKKKKKK--LYHDECSQN--GMCA-NGMCINMDGSFKCQC-KPGFVLSPTGHACIDVDE  164 (220)
Q Consensus       100 -------~~--~~~~C~c~~~~~~~~~~--~~~~~C~~~--~~c~-~~~C~~~~~~~~C~C-~~G~~~~~~g~~C~~i~~  164 (220)
                             .+  ..+.|.|..||+|..|+  ..++.|...  ..|. +|+|++.    +|.| .+||    .|..|..-..
T Consensus       532 ~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g----~C~C~~~Gy----~G~~Ce~C~~  603 (690)
T 3fcs_B          532 KGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG----SCVCIQPGS----YGDTCEKCPT  603 (690)
T ss_dssp             SSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETT----EEECCSTTC----BSTTSCBCTT
T ss_pred             CCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCC----EEECCCCCc----cCCCcCcCCC
Confidence                   11  22789999999999998  567788642  3454 5899763    8999 9999    7888854344


Q ss_pred             CCCCCCCCCC-CeEecCCCCeEEeCCCCCc
Q psy11800        165 CYENPLICLN-GRCDNTLGSYRCACQPGYS  193 (220)
Q Consensus       165 C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~  193 (220)
                      |   +..|.+ +.|++        |..+|+
T Consensus       604 C---~~~C~~~g~Cv~--------C~~g~t  622 (690)
T 3fcs_B          604 C---PDACTFKKECVE--------CKKFDR  622 (690)
T ss_dssp             S---CCTTTSCCGGGT--------TTTTCC
T ss_pred             C---CCCCCCCCCccc--------CCCCCc
Confidence            5   234875 78875        888887

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.85  E-value=2.6e-10  Score=83.86  Aligned_cols=119  Identities=24%  Similarity=0.519  Sum_probs=73.9

Q ss_pred             CCceEeeCCCCCccCCCCCCccCCCcccCC---CCCCccccccccccccccccccccCCCCCCCCceEecCCCCeEeecC
Q psy11800         71 LGSYRCACQPGYSPSPDGGFCVDRDECRTP---GDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCK  147 (220)
Q Consensus        71 ~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~---~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~  147 (220)
                      ...+.|.|++||.+......|.....|...   ...+.|.|.++|+|..|+.  +.|...-.+.++.|++   .++|.|.
T Consensus        14 ~~~~~c~C~~g~~G~~C~~~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~--~~C~~~C~~~~g~C~~---~~~C~C~   88 (169)
T 2vj2_A           14 EGRSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNR--AICRQGCSPKHGSCKL---PGDCRCQ   88 (169)
T ss_dssp             -------CCTTEETTTTCEECCCEEETTEEEEECSSCCEEECTTEESTTSCE--ECCCTTCCTTTEECSS---TTCCEEC
T ss_pred             ccCeeeeCCCcCcCCCcccccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCC--CCCCCCCCCCCcccCC---CCeeECC
Confidence            356789999999864433333322111110   1245789999999998875  3464321125677865   4689999


Q ss_pred             CCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCC-cCCCCCC
Q psy11800        148 PGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV-DRDECRT  209 (220)
Q Consensus       148 ~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~-~~~~C~~  209 (220)
                      +||    .|..|.   +|...+ .|.+++|+   ++|.|.|++||.    |..|+ ++++|..
T Consensus        89 ~G~----~G~~C~---~C~~~~-~C~~g~C~---~~~~C~C~~G~~----G~~C~~~~~~C~~  136 (169)
T 2vj2_A           89 YGW----QGLYCD---KCIPHP-GCVHGICN---EPWQCLCETNWG----GQLCDKDLNYCGT  136 (169)
T ss_dssp             TTE----ESSSSC---EECCCT-TCSSEECS---STTCCEECTTEE----TTTTCEESCHHHH
T ss_pred             CCC----CCCCcc---cCCCCC-CCCCCCcC---CCCEEeCCCCCC----CCcccCCCCCCCC
Confidence            999    566773   355443 37777887   578999999999    88997 7877753

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.84  E-value=2.8e-09  Score=88.80  Aligned_cols=81  Identities=36%  Similarity=0.874  Sum_probs=62.5

Q ss_pred             CccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCCCC
Q psy11800         53 DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCAN  132 (220)
Q Consensus        53 ~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~  132 (220)
                      |||..++..|. +.|++++++|.|.|++||.+ .+++.|+++++|.                           ....|.+
T Consensus         1 ~eC~~~~~~c~-~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~---------------------------~~~~C~~   51 (400)
T 3p5b_L            1 NECLDNNGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ---------------------------DPDTCSQ   51 (400)
T ss_dssp             CCTTTTGGGCS-SEEEECSSSEEEECCTTEEE-CSSSCEEECCCCS---------------------------TTSSCSS
T ss_pred             CcccCCCCCCC-CEeECCCCCeEEECCCCCCc-CCCCcccCchhhh---------------------------ccCCCCC
Confidence            57777664453 59999999999999999997 4677888775554                           2234444


Q ss_pred             ceEecCCCCeEeecCCCcEeCCCCCceeecC
Q psy11800        133 GMCINMDGSFKCQCKPGFVLSPTGHACIDVD  163 (220)
Q Consensus       133 ~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~  163 (220)
                       .|++..++|.|.|.+||.+...+..|..++
T Consensus        52 -~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~   81 (400)
T 3p5b_L           52 -LCVNLEGGYKCQCEEGFQLDPHTKACKAVG   81 (400)
T ss_dssp             -CCBCCSSSCBCCCCTTCCCCTTTSSCCCST
T ss_pred             -ccCCCccceeeeccccccccccccceeecc
Confidence             789999999999999998887777886543

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.83  E-value=3.2e-09  Score=85.93  Aligned_cols=119  Identities=28%  Similarity=0.700  Sum_probs=57.1

Q ss_pred             CC-CCCeeeeCCCceEeeCCCCCccCCCC-----CCccCCCcccCCCCCCccccccccccccccccccccCCCCCC-CCc
Q psy11800         61 IC-LNGRCDNTLGSYRCACQPGYSPSPDG-----GFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMC-ANG  133 (220)
Q Consensus        61 ~C-~~~~C~~~~g~~~C~C~~g~~~~~~~-----~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c-~~~  133 (220)
                      .| +++.|.+   .+.|.|++||.+....     ..|.+...|.   ..+.|.|.+||+|..|+.  +.|.  ..| .+|
T Consensus       154 ~C~~~G~C~~---~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~---~~~~C~C~~G~~G~~C~~--~~C~--~~C~~~G  223 (324)
T 2ygq_A          154 GCRNGGFCNE---RRICECPDGFHGPHCEKALCTPRCMNGGLCV---TPGFCICPPGFYGVNCDK--ANCS--TTCFNGG  223 (324)
T ss_dssp             CCCSSCEECT---TSCEECCTTEESSSSCEESSSSCCCTTCEEC---SSCCEECCTTCBTTTTCB--CCCS--SCCCSSC
T ss_pred             CCCCCCEECC---CCeEECCCCCcCCCCCCCCCCCCCCCCCEEc---CCCEEeCCCCccCCCccc--CcCC--CCCCCCC
Confidence            38 5689975   4789999999854211     1222333333   257899999999999875  3463  234 357


Q ss_pred             eEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCC
Q psy11800        134 MCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR  208 (220)
Q Consensus       134 ~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~  208 (220)
                      +|+..   ++|.|.+||    .|..|. +++|. .  .|.+ +.|+.   .+.|.|++||.    |..|+ +++|.
T Consensus       224 ~C~~~---~~C~C~~G~----~G~~C~-~~~C~-~--~C~~~g~C~~---~~~C~C~~G~~----G~~C~-~~~C~  280 (324)
T 2ygq_A          224 TCFYP---GKCICPPGL----EGEQCE-ISKCP-Q--PCRNGGKCIG---KSKCKCSKGYQ----GDLCS-KPVCE  280 (324)
T ss_dssp             CBSCS---SCBCCCTTC----CTTTTC-------------------------------------------------
T ss_pred             eeCCC---CeeeCCCCc----cCCCCC-cCcCC-C--cCCCCCEECC---CCEEECCCCCc----CCCCc-CCCCC
Confidence            88763   589999999    778884 56675 2  3875 78974   57899999998    77786 34443

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.76  E-value=2.9e-10  Score=81.68  Aligned_cols=91  Identities=36%  Similarity=0.648  Sum_probs=60.2

Q ss_pred             ccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecC-----------cCCCCCCCCCC-CeEecCCCC---
Q psy11800        119 LYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVD-----------ECYENPLICLN-GRCDNTLGS---  183 (220)
Q Consensus       119 ~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~-----------~C~~~~~~C~~-~~C~~~~~~---  183 (220)
                      .++|+|... .|.+++|++..++|+|.|++||.+...+..|.+++           .|......|.. +.|.+..+.   
T Consensus         2 ~dideC~~~-pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g   80 (147)
T 2w86_A            2 ADIDECESS-PCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWG   80 (147)
T ss_dssp             CCCCGGGGC-CSBTSEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEET
T ss_pred             CcCccCcCC-CCCCCEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccC
Confidence            356888654 46678999999999999999999877777776543           12111001110 123333333   


Q ss_pred             -------eEEeCCCCCccCCCCCCCCcCCCCCCCC
Q psy11800        184 -------YRCACQPGYSPSPDGGFCVDRDECRTPG  211 (220)
Q Consensus       184 -------~~C~C~~G~~~~~~g~~C~~~~~C~~~~  211 (220)
                             |.|.|++||.+ .+|+.|++|+||+..+
T Consensus        81 ~~C~~c~~~C~C~~Gy~~-~~g~~C~dideC~~~~  114 (147)
T 2w86_A           81 SPCTLCQVDPICGKGYSR-IKGTQCEDIDECEVFP  114 (147)
T ss_dssp             TTTEECCCCTTTCTTEEE-EETTEEEECCHHHHST
T ss_pred             CCcccCCCcccCCCcccc-CCCCccCccccccCCC
Confidence                   77899999964 2378899999997544

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.69  E-value=8.2e-09  Score=61.13  Aligned_cols=48  Identities=21%  Similarity=0.448  Sum_probs=41.0

Q ss_pred             CcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCCCC
Q psy11800        163 DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG  211 (220)
Q Consensus       163 ~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~~~  211 (220)
                      |+|....+.|.+ .|+|+.++|.|.|++||.|..+++.|+++++|....
T Consensus         2 dEC~~~~~~C~~-~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~cg~   49 (55)
T 2jkh_L            2 KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGK   49 (55)
T ss_dssp             CCTTTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSCTTC
T ss_pred             ccccCCCCCcCc-EeEcCCCCeEEeCCCCCEECCCCCeeccCccccCCC
Confidence            677765556865 899999999999999999999999999999986543

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.63  E-value=1.6e-08  Score=62.61  Aligned_cols=50  Identities=28%  Similarity=0.458  Sum_probs=43.3

Q ss_pred             eecCcCCCCCCCCCCCeEecCCC-CeEEeCCCCCccCCCCCCCCcCCCCCCC
Q psy11800        160 IDVDECYENPLICLNGRCDNTLG-SYRCACQPGYSPSPDGGFCVDRDECRTP  210 (220)
Q Consensus       160 ~~i~~C~~~~~~C~~~~C~~~~~-~~~C~C~~G~~~~~~g~~C~~~~~C~~~  210 (220)
                      .++++|....+.|.+ .|+++.+ +|.|.|++||.|..+++.|.++++|...
T Consensus         3 ~d~~eC~~~nggC~h-~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~Cg   53 (69)
T 1kli_L            3 DDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCG   53 (69)
T ss_dssp             SCCCCTTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTT
T ss_pred             cccccccCCCCCcCC-EeEcCCCCCEEEeCCCCCeECCCCCcccCcccccCC
Confidence            478899876666875 8999998 8999999999999999999999998643

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.59  E-value=6.5e-08  Score=87.03  Aligned_cols=84  Identities=35%  Similarity=0.829  Sum_probs=63.6

Q ss_pred             CCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCCC
Q psy11800         52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCA  131 (220)
Q Consensus        52 i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~  131 (220)
                      +++|..++..|. ..|+++.++|.|.|++||.+ .+++.|.++++|..                           ...|.
T Consensus       312 ~~~C~~~~~~C~-~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~---------------------------~~~C~  362 (791)
T 3m0c_C          312 TNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD---------------------------PDTCS  362 (791)
T ss_dssp             CCSTTTGGGGCS-SEEEECSBSEEEECCTTCEE-ETTTEEECCCCCSS---------------------------SSSCT
T ss_pred             cccccccccCcc-ccccCCCCCcccCCCCCCcc-CCCCccccCcccCC---------------------------CCCCC
Confidence            455554433343 38999999999999999987 45788888766542                           22333


Q ss_pred             CceEecCCCCeEeecCCCcEeCCCCCceeecCcC
Q psy11800        132 NGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC  165 (220)
Q Consensus       132 ~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C  165 (220)
                       .+|++..++|+|.|.+||.+.+.++.|.+++++
T Consensus       363 -~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~  395 (791)
T 3m0c_C          363 -QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI  395 (791)
T ss_dssp             -TTCCBCSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred             -CeeecCCCCceeecCCCCEeCCCCceeeecccc
Confidence             278999999999999999998888999887765

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.52  E-value=2.7e-07  Score=77.21  Aligned_cols=115  Identities=23%  Similarity=0.535  Sum_probs=73.4

Q ss_pred             eEeeCCCCCccCCCCC---CccCCCcccCCCCCCccccccccccccccccc----------cccCCCCCCCC-ceEecCC
Q psy11800         74 YRCACQPGYSPSPDGG---FCVDRDECRTPGDHDECSQKKKKKKKKKKLYH----------DECSQNGMCAN-GMCINMD  139 (220)
Q Consensus        74 ~~C~C~~g~~~~~~~~---~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~----------~~C~~~~~c~~-~~C~~~~  139 (220)
                      +.|.|+.||.+.....   .|.+...|..  ..+.|.|.++|.|..|+...          ++|.....|.+ +.|.  .
T Consensus       185 ~~c~C~~g~~G~~C~~~C~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~  260 (423)
T 2gy5_A          185 IVRRCEAQKWGPECNHLCTACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--P  260 (423)
T ss_dssp             EECSSCTTEESTTSCEECCCCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--T
T ss_pred             cCCcCCCCCCCCCCCCCCCCCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--C
Confidence            4577888887543332   3444444543  35788888888888887532          24443444543 6775  4


Q ss_pred             CCeEeecCCCcEeCCCCCceee-------cCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800        140 GSFKCQCKPGFVLSPTGHACID-------VDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       140 ~~~~C~C~~G~~~~~~g~~C~~-------i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      +.++|.|.+||    .|..|..       -+.|.. ...|.+ +.|.+..   .|.|++||.    |..|+..
T Consensus       261 ~~~~C~C~~G~----~G~~C~~~C~~G~~G~~C~~-~C~C~ngg~C~~~~---~C~C~~G~~----G~~Ce~~  321 (423)
T 2gy5_A          261 DPYGCSCATGW----KGLQCNEACHPGFYGPDCKL-RCSCNNGEMCDRFQ---GCLCSPGWQ----GLQCERE  321 (423)
T ss_dssp             TTTEEECCBTC----BSGGGCBCCCTTBCSBTTCC-BCCCTTCCEEETTT---EEECCTTCB----STTSCBC
T ss_pred             CCCeEEeCCCc----ccccccCccCCCCcCCcccc-cccCCCCCEecCCC---ceECCCCCc----CCCCccC
Confidence            56799999999    6777743       122322 113765 7898765   399999999    8889743

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.51  E-value=1.6e-07  Score=83.59  Aligned_cols=83  Identities=35%  Similarity=0.845  Sum_probs=62.9

Q ss_pred             CCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCC
Q psy11800         51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMC  130 (220)
Q Consensus        51 ~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c  130 (220)
                      ++++|..+++.|. ..|+++.++|.|.|++||.+ .+++.|+++++|..                           ...|
T Consensus       293 ~~~eC~~~~~~C~-~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~---------------------------~~~C  343 (699)
T 1n7d_A          293 GTNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD---------------------------PDTC  343 (699)
T ss_dssp             CCCCTTSSTTTSC-TTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSS---------------------------SSSC
T ss_pred             ccccccccccCcC-CCcccCCCCcEEeCCCCeEc-CCCCcccCccccCC---------------------------CCcc
Confidence            4677776555564 47999999999999999987 56778888766542                           2334


Q ss_pred             CCceEecCCCCeEeecCCCcEeCCCCCceeecC
Q psy11800        131 ANGMCINMDGSFKCQCKPGFVLSPTGHACIDVD  163 (220)
Q Consensus       131 ~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~  163 (220)
                      . ++|++..++|+|.|.+||.+...++.|.++.
T Consensus       344 ~-~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~~  375 (699)
T 1n7d_A          344 S-QLCVNLEGGYKCQCEEGFQLDPHTKACKAVG  375 (699)
T ss_dssp             T-TTCCBCSSCBCCCCCSSCBCCSSCCCCBCCS
T ss_pred             c-cccccCCCCeeeeeecccccCCCCCcccccc
Confidence            3 3789999999999999999887778886553

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.47  E-value=1.3e-07  Score=83.28  Aligned_cols=123  Identities=30%  Similarity=0.737  Sum_probs=85.2

Q ss_pred             CC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-C---------CcccCC---------C--CCCccccc------ccc
Q psy11800         61 IC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-R---------DECRTP---------G--DHDECSQK------KKK  112 (220)
Q Consensus        61 ~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~---------~~C~~~---------~--~~~~C~c~------~~~  112 (220)
                      .| .+|.|..    ..|.|.+||.+.    .|+- .         ..|...         +  ....|.|.      .+|
T Consensus       436 ~Cs~~G~C~~----g~C~C~~Gy~G~----~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G~C~C~~~~~~~~G~  507 (687)
T 3k6s_B          436 LCHGKGFLEC----GICRCDTGYIGK----NCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLI  507 (687)
T ss_dssp             TGGGSEEESS----SSEEECSSEEST----TSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETTEEEECCCCSTTCCE
T ss_pred             CCCCCCEEeC----CEeEcCCCCcCC----cccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCCEEEcCCCCCCCCCc
Confidence            47 5678863    469999999853    3330 0         123321         1  13478898      999


Q ss_pred             ccccccccccccCCC--CCCC---CceEecCCCCeEeecCCCcEeCCCCCcee---ecCcCCCC-CCCCCC-CeEecCCC
Q psy11800        113 KKKKKKLYHDECSQN--GMCA---NGMCINMDGSFKCQCKPGFVLSPTGHACI---DVDECYEN-PLICLN-GRCDNTLG  182 (220)
Q Consensus       113 ~~~~~~~~~~~C~~~--~~c~---~~~C~~~~~~~~C~C~~G~~~~~~g~~C~---~i~~C~~~-~~~C~~-~~C~~~~~  182 (220)
                      +|..|+.+...|...  ..|.   +|+|..  +  +|.|.+||    .|..|.   +++.|... ...|.+ |.|..   
T Consensus       508 ~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~--g--~C~C~~G~----~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~---  576 (687)
T 3k6s_B          508 YGQYCECDTINCERYNGQVCGGPGRGLCFC--G--KCRCHPGF----EGSACQCERTTEGCLNPRRVECSGRGRCRC---  576 (687)
T ss_dssp             ESTTSCEESSCSCEETTEETSHHHHEEEET--T--EEEECTTC----CSTTSCSCCSSCTTBCTTCSBTSSSCCBCS---
T ss_pred             cccccccccccccCCCCcCcCCCCCCeEEC--C--EEEcCCCC----cCCCCccCCCCCCCCCCCCCCCCCCCcCCC---
Confidence            999999877888642  3354   578885  2  89999999    788884   35778753 235875 88976   


Q ss_pred             CeEEeCCCCCccCCCCCCCCcCCCC
Q psy11800        183 SYRCACQPGYSPSPDGGFCVDRDEC  207 (220)
Q Consensus       183 ~~~C~C~~G~~~~~~g~~C~~~~~C  207 (220)
                       ..|.|.+||.    |..|+....|
T Consensus       577 -g~C~C~~Gy~----G~~Ce~c~~C  596 (687)
T 3k6s_B          577 -NVCECHSGYQ----LPLCQECPGC  596 (687)
T ss_dssp             -SCBCCSTTCC----TTTTCCCTTS
T ss_pred             -CEEECCCCCc----CCCCCCCCCC
Confidence             3699999999    8899764445

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.44  E-value=1.7e-07  Score=55.03  Aligned_cols=41  Identities=24%  Similarity=0.633  Sum_probs=33.1

Q ss_pred             Cce-eecCcCCCCCCCCCC-CeEe-----cCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        157 HAC-IDVDECYENPLICLN-GRCD-----NTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       157 ~~C-~~i~~C~~~~~~C~~-~~C~-----~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      .+| +++++|.+++  |.| |+|.     +..++|.|.|++||.    |++|+.
T Consensus         2 ~~c~~~~~eC~s~p--C~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE~   49 (55)
T 3u7u_G            2 TSHLVKCAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQN   49 (55)
T ss_dssp             -CCEEECCSTTTTT--SCTTCEEEEECCC--CCCEEEEECTTEE----STTSCE
T ss_pred             CCCcccCCCCcCCC--CCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcCc
Confidence            345 6899999888  998 8994     567899999999999    999974

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=98.39  E-value=1.1e-07  Score=55.28  Aligned_cols=42  Identities=24%  Similarity=0.483  Sum_probs=35.7

Q ss_pred             CCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCCC
Q psy11800        168 NPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTP  210 (220)
Q Consensus       168 ~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~~  210 (220)
                      .++.|.+ .|+|+.++|.|.|++||.|..++++|++++|+...
T Consensus         4 ~ng~C~~-~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~pCg   45 (51)
T 1kig_L            4 DNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERFPCG   45 (51)
T ss_dssp             TTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSSCTT
T ss_pred             CCCCcCC-EeEcCCCCeEEeCCCCcEECCCCCccccCCcccCC
Confidence            3445764 79999999999999999999999999999998544

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.38  E-value=3.7e-07  Score=49.81  Aligned_cols=36  Identities=47%  Similarity=1.119  Sum_probs=31.7

Q ss_pred             ecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        161 DVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       161 ~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      ++++|...+  |.+ ++|++..++|.|.|++||.    |+.|+
T Consensus         2 d~d~C~~~p--C~ngg~C~~~~~~~~C~C~~G~~----G~~Ce   38 (39)
T 1edm_B            2 DGDQCESNP--CLNGGSCKDDINSYECWCPFGFE----GKNCE   38 (39)
T ss_dssp             CCCTTTTCC--CCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred             ccccCCCCC--CCCCCEeEcCCCceEeECCCCCc----CCccC
Confidence            678998776  987 8999999999999999998    88775

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=98.36  E-value=1.9e-07  Score=54.68  Aligned_cols=46  Identities=28%  Similarity=0.543  Sum_probs=37.1

Q ss_pred             CCCCCCCCCCCeEecCCC-CeEEeCCCCCccCCCCCCCCcCCCCCCCC
Q psy11800        165 CYENPLICLNGRCDNTLG-SYRCACQPGYSPSPDGGFCVDRDECRTPG  211 (220)
Q Consensus       165 C~~~~~~C~~~~C~~~~~-~~~C~C~~G~~~~~~g~~C~~~~~C~~~~  211 (220)
                      |+...+.|.+ .|+++.+ +|.|.|++||.|..+++.|++++||....
T Consensus         2 C~~~nggC~~-~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~cg~   48 (53)
T 2bz6_L            2 CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGK   48 (53)
T ss_dssp             TTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTTC
T ss_pred             CcCCCCCcCC-EeEcCCCCCEEeeCCCCCEECCCCCcccCCccccCCC
Confidence            3333334765 8999998 79999999999999999999999986443

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.30  E-value=4.2e-07  Score=53.38  Aligned_cols=42  Identities=26%  Similarity=0.626  Sum_probs=31.2

Q ss_pred             CCCC-CCCCccCCCCCCC-CCCee-----eeCCCceEeeCCCCCccCCCCCCccC
Q psy11800         46 GVSD-LNVDECYENPLIC-LNGRC-----DNTLGSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        46 g~~C-~~i~~C~~~~~~C-~~~~C-----~~~~g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      |..| .+++||.++|  | +.|+|     ++..++|+|.|++||+    |..|+.
T Consensus         1 G~~c~~~~~eC~s~p--C~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE~   49 (55)
T 3u7u_G            1 GTSHLVKCAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQN   49 (55)
T ss_dssp             --CCEEECCSTTTTT--SCTTCEEEEECCC--CCCEEEEECTTEE----STTSCE
T ss_pred             CCCCcccCCCCcCCC--CCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcCc
Confidence            3456 6799999988  9 56999     4567889999999998    566653

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.30  E-value=1.1e-06  Score=47.91  Aligned_cols=32  Identities=38%  Similarity=0.984  Sum_probs=28.2

Q ss_pred             CCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCcc
Q psy11800         51 NVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSP   84 (220)
Q Consensus        51 ~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~   84 (220)
                      ++++|..+|  | ++++|++..++|.|.|++||.+
T Consensus         2 d~d~C~~~p--C~ngg~C~~~~~~~~C~C~~G~~G   34 (39)
T 1edm_B            2 DGDQCESNP--CLNGGSCKDDINSYECWCPFGFEG   34 (39)
T ss_dssp             CCCTTTTCC--CCTTCEEEEETTEEEEECCTTCCS
T ss_pred             ccccCCCCC--CCCCCEeEcCCCceEeECCCCCcC
Confidence            678998877  9 5589999999999999999983

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.27  E-value=4.8e-07  Score=55.89  Aligned_cols=49  Identities=27%  Similarity=0.467  Sum_probs=41.5

Q ss_pred             CCCCCccCCCCCCCCCCeeeeCCC-ceEeeCCCCCccCCCCCCccCCCccc
Q psy11800         49 DLNVDECYENPLICLNGRCDNTLG-SYRCACQPGYSPSPDGGFCVDRDECR   98 (220)
Q Consensus        49 C~~i~~C~~~~~~C~~~~C~~~~g-~~~C~C~~g~~~~~~~~~C~~~~~C~   98 (220)
                      .+|+++|..+.+.|.+ .|+++.+ +|.|.|++||.+..++++|.++++|.
T Consensus         2 ~~d~~eC~~~nggC~h-~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~   51 (69)
T 1kli_L            2 KDDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   51 (69)
T ss_dssp             CSCCCCTTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             CcccccccCCCCCcCC-EeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence            3578999876667854 8999998 89999999999999999999887664

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.26  E-value=3.9e-07  Score=53.77  Aligned_cols=45  Identities=22%  Similarity=0.501  Sum_probs=37.3

Q ss_pred             CccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCccc
Q psy11800         53 DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR   98 (220)
Q Consensus        53 ~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~   98 (220)
                      |||...++.|.+ .|++++++|.|.|++||.+..++++|.++++|.
T Consensus         2 dEC~~~~~~C~~-~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~   46 (55)
T 2jkh_L            2 KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYP   46 (55)
T ss_dssp             CCTTTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             ccccCCCCCcCc-EeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence            567655555754 899999999999999999988899999887664

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.26  E-value=7.1e-07  Score=52.16  Aligned_cols=42  Identities=38%  Similarity=0.905  Sum_probs=34.4

Q ss_pred             eecCcCCCC--------CCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        160 IDVDECYEN--------PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       160 ~~i~~C~~~--------~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      .+||+|...        ...|.+ .|+|+.++|.|.|++||.+..+++.|.
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~-~C~n~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQH-LCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSS-EEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             CccccccCcccccccccCCCCCC-EeECCCCCeEEECCCCCeECCCCCccC
Confidence            368889763        245864 999999999999999999888888775

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.14  E-value=2.8e-06  Score=49.53  Aligned_cols=42  Identities=36%  Similarity=0.854  Sum_probs=33.7

Q ss_pred             CCCCccCCC--------CCCCCCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         50 LNVDECYEN--------PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        50 ~~i~~C~~~--------~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      ++|+||...        ...|. ..|++++++|.|.|++||.+..+++.|.
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~-~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQ-HLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTS-SEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             CccccccCcccccccccCCCCC-CEeECCCCCeEEECCCCCeECCCCCccC
Confidence            468888763        24485 4999999999999999999877777775

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.12  E-value=6.4e-06  Score=48.04  Aligned_cols=39  Identities=41%  Similarity=0.846  Sum_probs=31.9

Q ss_pred             ecCcCCCC-CCCCCC-CeEe--cCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        161 DVDECYEN-PLICLN-GRCD--NTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       161 ~i~~C~~~-~~~C~~-~~C~--~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      +|++|.+. ..+|.| |+|+  +..++|.|.|++||+    |..|+.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~   44 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT   44 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence            57888865 123987 8999  788999999999998    889963

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=98.10  E-value=8.8e-06  Score=70.04  Aligned_cols=38  Identities=16%  Similarity=0.118  Sum_probs=26.7

Q ss_pred             CCcccCCCCCCCCCCCCccccccCCCCCCCCCCCCccC
Q psy11800         19 GPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECY   56 (220)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~C~~i~~C~   56 (220)
                      +.|.|.++|.|..|.++..++...++....+.+.+.+.
T Consensus       279 g~C~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~  316 (525)
T 4aqs_A          279 GHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACK  316 (525)
T ss_dssp             CEECCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCC
T ss_pred             ccccCcCCCcCCCCcCCCCccCCCccCCCcccCCCccc
Confidence            45889999999999888777776666655554444433

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.98  E-value=7e-06  Score=50.94  Aligned_cols=39  Identities=31%  Similarity=0.590  Sum_probs=30.0

Q ss_pred             ecCcCCCCCCCCCC-CeEecCCCCeEEe-CCCCCccCCCCC
Q psy11800        161 DVDECYENPLICLN-GRCDNTLGSYRCA-CQPGYSPSPDGG  199 (220)
Q Consensus       161 ~i~~C~~~~~~C~~-~~C~~~~~~~~C~-C~~G~~~~~~g~  199 (220)
                      +||||...++.|.+ +.|+|+.++|.|. +..||.....+.
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~   42 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGE   42 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCS
T ss_pred             ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCC
Confidence            68999887777975 7999999999998 445666544444

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.98  E-value=7.5e-07  Score=53.47  Aligned_cols=46  Identities=28%  Similarity=0.559  Sum_probs=37.0

Q ss_pred             ceeecCcCCCCCCCCCC---CeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCC
Q psy11800        158 ACIDVDECYENPLICLN---GRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR  208 (220)
Q Consensus       158 ~C~~i~~C~~~~~~C~~---~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~  208 (220)
                      .+.++|+|.++|  |.|   ++|++..++|.|.|++||..   |..|++.++|.
T Consensus         7 ~~~~~d~C~snP--C~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C~~~~~C~   55 (61)
T 2k2s_B            7 LSETPAACSSNP--CGPEAAGTCKETNSGYICRCNQGYRI---SLDGTGNVTCI   55 (61)
T ss_dssp             CTTSCCHHHHCS--SCSSSCCEEEECSSEEEEECCTTEEE---EECSSSCEEEE
T ss_pred             hcCCCCcCcCCC--CcCCCccccccCCCceEeECCCCCcc---CCCCCCCCEec
Confidence            356788998777  986   49999999999999999972   56787766665

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.96  E-value=1.4e-06  Score=52.29  Aligned_cols=44  Identities=30%  Similarity=0.650  Sum_probs=34.4

Q ss_pred             CCCCCCccCCCCCCC-CC--CeeeeCCCceEeeCCCCCc-cCCCCCCccCCCcc
Q psy11800         48 SDLNVDECYENPLIC-LN--GRCDNTLGSYRCACQPGYS-PSPDGGFCVDRDEC   97 (220)
Q Consensus        48 ~C~~i~~C~~~~~~C-~~--~~C~~~~g~~~C~C~~g~~-~~~~~~~C~~~~~C   97 (220)
                      .++++++|.++|  | ++  ++|+++.++|.|.|++||. +    ..|+...+|
T Consensus         7 ~~~~~d~C~snP--C~nga~gtC~~~~g~y~C~C~~Gy~~G----~~C~~~~~C   54 (61)
T 2k2s_B            7 LSETPAACSSNP--CGPEAAGTCKETNSGYICRCNQGYRIS----LDGTGNVTC   54 (61)
T ss_dssp             CTTSCCHHHHCS--SCSSSCCEEEECSSEEEEECCTTEEEE----ECSSSCEEE
T ss_pred             hcCCCCcCcCCC--CcCCCccccccCCCceEeECCCCCccC----CCCCCCCEe
Confidence            467789999888  9 44  6999999999999999998 4    345544334

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=97.96  E-value=4.1e-06  Score=49.98  Aligned_cols=41  Identities=22%  Similarity=0.476  Sum_probs=32.7

Q ss_pred             CCCCCCCCCCCeEecCC-CCeEEeCCCCCccCCCCCCCCcCCC
Q psy11800        165 CYENPLICLNGRCDNTL-GSYRCACQPGYSPSPDGGFCVDRDE  206 (220)
Q Consensus       165 C~~~~~~C~~~~C~~~~-~~~~C~C~~G~~~~~~g~~C~~~~~  206 (220)
                      |....+.|.+ .|+++. ++|.|.|++||.|..+++.|.++++
T Consensus         2 C~~~nggC~~-~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~   43 (59)
T 2wph_E            2 CNIKNGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVP   43 (59)
T ss_dssp             TTTGGGGCSS-EEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred             CcCCCCCcCC-EeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence            3333334765 899998 6999999999999999999987654

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.94  E-value=6.2e-06  Score=46.53  Aligned_cols=38  Identities=29%  Similarity=0.754  Sum_probs=30.6

Q ss_pred             ecCcCCC---CCCCCCCCeEecCC--CCeEEeCCCCCccCCCCCCCCcC
Q psy11800        161 DVDECYE---NPLICLNGRCDNTL--GSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       161 ~i~~C~~---~~~~C~~~~C~~~~--~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      ++++|.+   ++  |.||+|++..  ++|.|.|++||+    |..|+..
T Consensus         2 ~i~~C~~~~~~p--C~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~~   44 (46)
T 1k36_A            2 SITKCSSDMNGY--CLHGQCIYLVDMSQNYCRCEVGYT----GVRCEHF   44 (46)
T ss_dssp             CEECCCTTCCSS--CSSEEEEEETTTTEEEEEECTTCS----STTSCCC
T ss_pred             ccccCCCCCCCC--CCCCEeeccCCCCCEEEECCCCCc----cCCCCcc
Confidence            4677876   55  9889998754  689999999999    8999744

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=97.90  E-value=1.7e-05  Score=66.35  Aligned_cols=108  Identities=24%  Similarity=0.538  Sum_probs=68.6

Q ss_pred             ccccCCCCCCCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCc---------c----CCCcccCC---
Q psy11800         38 GLSDSLSLGVSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFC---------V----DRDECRTP---  100 (220)
Q Consensus        38 ~~~~~~~~g~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C---------~----~~~~C~~~---  100 (220)
                      +.|..+|.|..|+.  .|.  +  | +++.|.+  +.+.|.|++||.+......|         .    ..+.|...   
T Consensus       187 c~C~~g~~G~~C~~--~C~--~--C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C  258 (423)
T 2gy5_A          187 RRCEAQKWGPECNH--LCT--A--CMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFC  258 (423)
T ss_dssp             CSSCTTEESTTSCE--ECC--C--CCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEE
T ss_pred             CcCCCCCCCCCCCC--CCC--C--CCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEE
Confidence            45666677877763  353  3  8 5689976  46789999999854322211         1    11223221   


Q ss_pred             -CCCCcccccccccccccccc------ccccCCCCCCC-CceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800        101 -GDHDECSQKKKKKKKKKKLY------HDECSQNGMCA-NGMCINMDGSFKCQCKPGFVLSPTGHACI  160 (220)
Q Consensus       101 -~~~~~C~c~~~~~~~~~~~~------~~~C~~~~~c~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  160 (220)
                       ...+.|.|..+|.|..|+..      .+.|...-.|. +++|.+..   .|.|++||    .|..|.
T Consensus       259 ~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~----~G~~Ce  319 (423)
T 2gy5_A          259 LPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGW----QGLQCE  319 (423)
T ss_dssp             ETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTC----BSTTSC
T ss_pred             CCCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCC----cCCCCc
Confidence             24688999999999988751      12343221344 47898764   49999999    777774

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=97.90  E-value=3.8e-06  Score=48.57  Aligned_cols=39  Identities=26%  Similarity=0.545  Sum_probs=32.4

Q ss_pred             CCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcc
Q psy11800         58 NPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC   97 (220)
Q Consensus        58 ~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C   97 (220)
                      +++.|.+ .|+++.++|+|.|++||.+..++++|.+++++
T Consensus         4 ~ng~C~~-~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~   42 (51)
T 1kig_L            4 DNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             TTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCCCcCC-EeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence            3445743 79999999999999999998899999988664

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.87  E-value=1.9e-05  Score=44.28  Aligned_cols=35  Identities=40%  Similarity=0.732  Sum_probs=27.3

Q ss_pred             cCCCC-CCCCCC-CeEe--cCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        164 ECYEN-PLICLN-GRCD--NTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       164 ~C~~~-~~~C~~-~~C~--~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      +|.+. ..+|.| |+|+  +..++|.|.|++||.    |..|+
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   40 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ   40 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence            45544 113887 7998  678899999999999    89996

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.85  E-value=7.9e-07  Score=69.64  Aligned_cols=55  Identities=22%  Similarity=0.552  Sum_probs=42.9

Q ss_pred             eecCcCCCCCCCCC-CCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCCCCCCceE
Q psy11800        160 IDVDECYENPLICL-NGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGGKYTA  216 (220)
Q Consensus       160 ~~i~~C~~~~~~C~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~  216 (220)
                      .++|||..+.+.|+ ++.|+|+.++|.|.|.+||.  .+|..|.++|+.....|.+.|
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~d~PqRvnGs~sG   58 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAEGSPQRVNGKVKG   58 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEETTCEEEEEEEEEE
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCCCCCceeceeEeE
Confidence            37899987666797 48999999999999999998  568899999887666666655

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.81  E-value=1.7e-05  Score=49.18  Aligned_cols=61  Identities=18%  Similarity=0.244  Sum_probs=40.1

Q ss_pred             CCCCccCCCCCCC-CCCeeeeCCCceEee-CCCCCccCCCCCCccCCCcccCCCCCCcccccccccc
Q psy11800         50 LNVDECYENPLIC-LNGRCDNTLGSYRCA-CQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKK  114 (220)
Q Consensus        50 ~~i~~C~~~~~~C-~~~~C~~~~g~~~C~-C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~  114 (220)
                      ++||||...++.| .++.|+|+.++|+|. +..||.+..++..+..  .+...  ...+.|..||..
T Consensus         1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~~~--~~~~~--~~~~~C~~Gy~~   63 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPPP--PVPPA--QHPNPCPPGYEP   63 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSCCC--SSCSC--SSCCCSCTTEEE
T ss_pred             CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCcccc--ccccC--ccccCCCCCeee
Confidence            3789998766679 457999999999997 5568887655543321  11111  124467778764

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.80  E-value=1.4e-05  Score=48.32  Aligned_cols=43  Identities=30%  Similarity=0.635  Sum_probs=35.3

Q ss_pred             cCcCCCCCCCCCC-CeEec-----CCCCeEEeCCCCCccCCCCCCCC-cCCCCCCC
Q psy11800        162 VDECYENPLICLN-GRCDN-----TLGSYRCACQPGYSPSPDGGFCV-DRDECRTP  210 (220)
Q Consensus       162 i~~C~~~~~~C~~-~~C~~-----~~~~~~C~C~~G~~~~~~g~~C~-~~~~C~~~  210 (220)
                      .++|..++  |.| |+|++     ..++|.|.|++||.    |..|+ +++++...
T Consensus         6 c~~C~~~p--C~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~~i~~~~~~   55 (63)
T 1hae_A            6 CAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMKVQN   55 (63)
T ss_dssp             CCHHHHTT--SCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCEECCSSCTT
T ss_pred             cCCCCCCc--CCCCcEEecCCccCCCCCEEEECCCCCc----CCccCcCcCccccc
Confidence            46677666  987 89986     66899999999999    99996 78888754

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=97.76  E-value=1.2e-05  Score=46.88  Aligned_cols=39  Identities=31%  Similarity=0.563  Sum_probs=32.4

Q ss_pred             CCCCCCCeeeeCCC-ceEeeCCCCCccCCCCCCccCCCccc
Q psy11800         59 PLICLNGRCDNTLG-SYRCACQPGYSPSPDGGFCVDRDECR   98 (220)
Q Consensus        59 ~~~C~~~~C~~~~g-~~~C~C~~g~~~~~~~~~C~~~~~C~   98 (220)
                      .+.|.+ .|+++.+ +|+|.|++||.+..++++|.++++|.
T Consensus         6 nggC~~-~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~   45 (53)
T 2bz6_L            6 NGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   45 (53)
T ss_dssp             GGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             CCCcCC-EeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence            344643 7999998 79999999999998999999887663

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.76  E-value=2.8e-05  Score=43.83  Aligned_cols=37  Identities=30%  Similarity=0.807  Sum_probs=29.0

Q ss_pred             CCCccCC---CCCCCCCCeeeeCC--CceEeeCCCCCccCCCCCCccC
Q psy11800         51 NVDECYE---NPLICLNGRCDNTL--GSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        51 ~i~~C~~---~~~~C~~~~C~~~~--g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      ++++|..   +|  |.||+|++..  ++|.|.|++||+    |..|+.
T Consensus         2 ~i~~C~~~~~~p--C~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~   43 (46)
T 1k36_A            2 SITKCSSDMNGY--CLHGQCIYLVDMSQNYCRCEVGYT----GVRCEH   43 (46)
T ss_dssp             CEECCCTTCCSS--CSSEEEEEETTTTEEEEEECTTCS----STTSCC
T ss_pred             ccccCCCCCCCC--CCCCEeeccCCCCCEEEECCCCCc----cCCCCc
Confidence            5778887   67  9569999754  689999999998    556653

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.74  E-value=3.2e-05  Score=45.03  Aligned_cols=37  Identities=38%  Similarity=0.826  Sum_probs=29.5

Q ss_pred             CCCccCCC---CCCC-CCCeee--eCCCceEeeCCCCCccCCCCCCccC
Q psy11800         51 NVDECYEN---PLIC-LNGRCD--NTLGSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        51 ~i~~C~~~---~~~C-~~~~C~--~~~g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      +|++|.++   |  | ++++|+  +..++|.|.|++||+    |..|+.
T Consensus         2 ~i~~C~~~~~~p--C~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~   44 (53)
T 1egf_A            2 SYPGCPSSYDGY--CLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT   44 (53)
T ss_dssp             EECCCCTTSSCS--SCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred             CcccCCCCCCCc--CCCCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence            46788875   6  9 558999  788999999999998    556654

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.68  E-value=4.5e-05  Score=57.86  Aligned_cols=88  Identities=25%  Similarity=0.554  Sum_probs=55.5

Q ss_pred             Ccccccccccccccccccc---------ccCC---CCCCC-CceEecCCCCeEeecCCCcEeC--CCCCcee-ecCcCCC
Q psy11800        104 DECSQKKKKKKKKKKLYHD---------ECSQ---NGMCA-NGMCINMDGSFKCQCKPGFVLS--PTGHACI-DVDECYE  167 (220)
Q Consensus       104 ~~C~c~~~~~~~~~~~~~~---------~C~~---~~~c~-~~~C~~~~~~~~C~C~~G~~~~--~~g~~C~-~i~~C~~  167 (220)
                      +.|.|.++|+|..|+...+         .|..   ...|. +|+|+.    .+|.|.+||...  -.|..|. +++.|..
T Consensus       107 g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~  182 (217)
T 2p28_B          107 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECDTINCER  182 (217)
T ss_dssp             TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCCEESTTSCEESSCSCE
T ss_pred             CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCcccEECCCcccCCccCCC
Confidence            4566666666666654322         3432   23353 578984    279999993100  0677884 5677864


Q ss_pred             C-CCCCC-C--CeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        168 N-PLICL-N--GRCDNTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       168 ~-~~~C~-~--~~C~~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      . ...|. +  |+|..    ..|.|.+||.    |..|+.
T Consensus       183 ~~g~~C~~~~~G~C~~----g~C~C~~G~~----G~~C~~  214 (217)
T 2p28_B          183 YNGQVCGGPGRGLCFC----GKCRCHPGFE----GSACQH  214 (217)
T ss_dssp             ETTEETTCTTTEEEET----TEEEECTTEE----STTSCE
T ss_pred             CCCCCCCCCCCcEEeC----CeeECCCCCc----cCCcCC
Confidence            3 12375 4  78985    2799999999    888863

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.68  E-value=6.6e-05  Score=66.18  Aligned_cols=92  Identities=27%  Similarity=0.702  Sum_probs=65.6

Q ss_pred             CCcccccccccccccccccc---------ccCCCC---CC-CCceEecCCCCeEeecC------CCcEeCCCCCcee-ec
Q psy11800        103 HDECSQKKKKKKKKKKLYHD---------ECSQNG---MC-ANGMCINMDGSFKCQCK------PGFVLSPTGHACI-DV  162 (220)
Q Consensus       103 ~~~C~c~~~~~~~~~~~~~~---------~C~~~~---~c-~~~~C~~~~~~~~C~C~------~G~~~~~~g~~C~-~i  162 (220)
                      .+.|.|..||+|..|+...+         .|....   .| .+|.|+.  +  +|.|.      +||    .|..|. ++
T Consensus       445 ~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G--~C~C~~~~~~~~G~----~G~~Ce~~~  516 (687)
T 3k6s_B          445 CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--G--QCLCHTSDVPGKLI----YGQYCECDT  516 (687)
T ss_dssp             SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET--T--EEEECCCCSTTCCE----ESTTSCEES
T ss_pred             CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC--C--EEEcCCCCCCCCCc----ccccccccc
Confidence            46899999999999986443         475432   35 4589984  2  89999      999    788883 67


Q ss_pred             CcCCCC-CCCCC---CCeEecCCCCeEEeCCCCCccCCCCCCCC---cCCCCCCC
Q psy11800        163 DECYEN-PLICL---NGRCDNTLGSYRCACQPGYSPSPDGGFCV---DRDECRTP  210 (220)
Q Consensus       163 ~~C~~~-~~~C~---~~~C~~~~~~~~C~C~~G~~~~~~g~~C~---~~~~C~~~  210 (220)
                      +.|... ...|.   +|.|..  +  .|.|.+||.    |..|+   .++.|...
T Consensus       517 ~~C~~~~~~~C~~~~~G~C~~--g--~C~C~~G~~----G~~Cec~~~~~~C~~~  563 (687)
T 3k6s_B          517 INCERYNGQVCGGPGRGLCFC--G--KCRCHPGFE----GSACQCERTTEGCLNP  563 (687)
T ss_dssp             SCSCEETTEETSHHHHEEEET--T--EEEECTTCC----STTSCSCCSSCTTBCT
T ss_pred             ccccCCCCcCcCCCCCCeEEC--C--EEEcCCCCc----CCCCccCCCCCCCCCC
Confidence            778632 22375   468875  2  799999999    88886   24666643

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.67  E-value=6.3e-06  Score=69.80  Aligned_cols=79  Identities=32%  Similarity=0.763  Sum_probs=34.9

Q ss_pred             ccccccccccccccccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEecCCCC
Q psy11800        105 ECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTLGS  183 (220)
Q Consensus       105 ~C~c~~~~~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~~~  183 (220)
                      ...|..+|.+..|..  +.|..  .|.+++|+..   ++|.|.+||    .|..|. ++.|..   .|.+ ++|++.   
T Consensus       378 p~~C~~~~~g~~c~~--~~C~~--~C~nG~C~~~---~~C~C~~G~----~G~~C~-~~~C~~---~C~~~g~C~~~---  439 (463)
T 2wg3_C          378 PEECRATVQPAQTLT--SECSR--LCRNGYCTPT---GKCCCSPGW----EGDFCR-TAKCEP---ACRHGGVCVRP---  439 (463)
T ss_dssp             CGGGCCCCCCCCCCC--CHHHH--HCCSEEECTT---SCEEECTTE----ESTTSC-EECC-------------------
T ss_pred             cccCCCCCcCCCCcc--ccccC--CCCCCccCCC---CeECCCCCc----CCCcCC-cCcCCC---CCCCCCEECCC---
Confidence            356677777776654  55643  3667899764   389999999    677883 567875   4986 799865   


Q ss_pred             eEEeCCCCCccCCCCCCCCcCC
Q psy11800        184 YRCACQPGYSPSPDGGFCVDRD  205 (220)
Q Consensus       184 ~~C~C~~G~~~~~~g~~C~~~~  205 (220)
                      +.|.|.+||.    |..|+..+
T Consensus       440 ~~C~C~~G~~----G~~C~~~~  457 (463)
T 2wg3_C          440 NKCLCKKGYL----GPQCEQVD  457 (463)
T ss_dssp             ----------------------
T ss_pred             CEEECCCCcc----cCCCCCCc
Confidence            6899999999    88887543

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.67  E-value=0.00023  Score=46.65  Aligned_cols=70  Identities=29%  Similarity=0.582  Sum_probs=55.2

Q ss_pred             CCceEec-CCCCeEeecCCCcEeCCCCCceeecCc-CCCCCCCCC-CCeEecCC-CCeEEeCCCCCccC-CCCCCCC
Q psy11800        131 ANGMCIN-MDGSFKCQCKPGFVLSPTGHACIDVDE-CYENPLICL-NGRCDNTL-GSYRCACQPGYSPS-PDGGFCV  202 (220)
Q Consensus       131 ~~~~C~~-~~~~~~C~C~~G~~~~~~g~~C~~i~~-C~~~~~~C~-~~~C~~~~-~~~~C~C~~G~~~~-~~g~~C~  202 (220)
                      .++.|+. .++...|+|..||..  ++..|..+++ |..+.+.|. ++.|+... ..-.|.|.++|... .+|.+|.
T Consensus        20 ~NA~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~   94 (105)
T 1n1i_A           20 ENAACYRYLDGTEEWRCLLGFKE--VGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFCS   94 (105)
T ss_dssp             TTEEEEECTTSCEEEEECTTEEE--CSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEEC
T ss_pred             CCCCeEECCCCCEeEEEECCeec--cCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEEC
Confidence            4678887 678889999999988  6888977788 877766797 59999886 78899999997521 2455554

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=97.52  E-value=0.00023  Score=46.40  Aligned_cols=70  Identities=27%  Similarity=0.597  Sum_probs=53.4

Q ss_pred             CCceEec-CCCCeEeecCCCcEeCCCCCceeec--CcCCCCCCCCC-CCeEecCC-----CCeEEeCCCCCccC-CCCCC
Q psy11800        131 ANGMCIN-MDGSFKCQCKPGFVLSPTGHACIDV--DECYENPLICL-NGRCDNTL-----GSYRCACQPGYSPS-PDGGF  200 (220)
Q Consensus       131 ~~~~C~~-~~~~~~C~C~~G~~~~~~g~~C~~i--~~C~~~~~~C~-~~~C~~~~-----~~~~C~C~~G~~~~-~~g~~  200 (220)
                      .++.|.. .++...|+|.+||.+  ++..|..+  +.|+.+...|. +|.|+...     +...|.|.+||... .+|.+
T Consensus        14 ~NA~C~r~~~g~e~C~C~~gy~g--dg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~~~~gvf   91 (99)
T 1ob1_C           14 QNSGCFRHLDEREECKCLLNYKQ--EGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPLFDGIF   91 (99)
T ss_dssp             TTEEEECCTTSCCEEEECTTEEE--ETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCCEEGGGTE
T ss_pred             CCCCeEEcCCCCEEEEecCCeec--CCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcccceeEEE
Confidence            4678877 467889999999988  67889766  58987767797 59999875     57899999998621 23555


Q ss_pred             CC
Q psy11800        201 CV  202 (220)
Q Consensus       201 C~  202 (220)
                      |.
T Consensus        92 ~~   93 (99)
T 1ob1_C           92 CS   93 (99)
T ss_dssp             EC
T ss_pred             ec
Confidence            43

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.37  E-value=0.00019  Score=40.07  Aligned_cols=33  Identities=36%  Similarity=0.699  Sum_probs=25.0

Q ss_pred             ccCCC---CCCC-CCCeee--eCCCceEeeCCCCCccCCCCCCcc
Q psy11800         54 ECYEN---PLIC-LNGRCD--NTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        54 ~C~~~---~~~C-~~~~C~--~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      +|.++   |  | ++++|+  +..++|+|.|++||+    +..|+
T Consensus         2 ~C~~~~~~p--C~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   40 (45)
T 1a3p_A            2 GXPSSYDGY--CLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ   40 (45)
T ss_dssp             CCTTCCSSC--CSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred             CcccCCCCC--CCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence            45554   6  8 558998  677899999999998    55554

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.35  E-value=2.4e-05  Score=61.26  Aligned_cols=45  Identities=24%  Similarity=0.667  Sum_probs=34.5

Q ss_pred             CCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCc
Q psy11800         50 LNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDE   96 (220)
Q Consensus        50 ~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~   96 (220)
                      +++|||....+.| .++.|+|+.++|.|.|.+||.+  ++..|.+++.
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~G--nG~~C~d~d~   48 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG--NGRQCVAEGS   48 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEE--CSSSEEETTC
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCC--CCCcCCCCCC
Confidence            4789998655669 6789999999999999999986  5778887654

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=97.30  E-value=0.00015  Score=52.84  Aligned_cols=53  Identities=34%  Similarity=0.724  Sum_probs=42.0

Q ss_pred             CCcEeCCCCCceeecCcCCCCCCC---CCCCeEecCCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800        148 PGFVLSPTGHACIDVDECYENPLI---CLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       148 ~G~~~~~~g~~C~~i~~C~~~~~~---C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      .||.+   ...+.++++|...+..   |.+ .|+++.++|.|.|++||.+..+++.|+++
T Consensus       113 ~Gf~~---~~~~~di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~  168 (170)
T 1szb_A          113 TGFEA---FYAAEDIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ  168 (170)
T ss_dssp             CEEEE---EEEEEECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred             cCcee---eeeccccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence            56643   1235788999876543   876 89999999999999999998899999765

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.27  E-value=2.5e-05  Score=45.31  Aligned_cols=41  Identities=32%  Similarity=0.649  Sum_probs=31.4

Q ss_pred             eEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEec----CCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        142 FKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDN----TLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       142 ~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~----~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      ++|.|++||.               .++  |.| |+|++    ..++|.|.|++||.    |..|+.
T Consensus         3 ~~C~C~~g~~---------------~~p--C~NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce~   48 (52)
T 3ca7_A            3 PTYKCPETFD---------------AWY--CLNDAHCFAVKIADLPVYSCECAIGFM----GQRCEY   48 (52)
T ss_dssp             CCBCCCHHHH---------------HHT--SCTTCEEEEEEETTEEEEEEECCTTEE----STTSCE
T ss_pred             eeeECCCCCc---------------CCc--CCCCCEEecCccCCCCCEEEECCCCCc----CCCCcc
Confidence            3688888882               123  777 79986    35689999999999    888873

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.24  E-value=0.0001  Score=53.21  Aligned_cols=41  Identities=32%  Similarity=0.822  Sum_probs=32.7

Q ss_pred             CcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCC
Q psy11800        163 DECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT  209 (220)
Q Consensus       163 ~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~  209 (220)
                      ++|...+  |.+ +.|.+..++|.|+|++||.    |..|+.+++|+.
T Consensus       120 ~~c~~~~--C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~~  161 (162)
T 1g1s_A          120 ASCQDMS--CSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDDD  161 (162)
T ss_dssp             CCCCTTG--GGGSEEEEECSSSEEEEECTTEE----STTSCEECC---
T ss_pred             CCCcCCC--CCCCCEEecCCCCceEeCCCCCc----CcccccCcccCC
Confidence            4565554  875 8999999999999999999    899999999975

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=97.21  E-value=0.00017  Score=42.89  Aligned_cols=35  Identities=23%  Similarity=0.512  Sum_probs=29.2

Q ss_pred             CCCCCCCeeeeCC-CceEeeCCCCCccCCCCCCccCC
Q psy11800         59 PLICLNGRCDNTL-GSYRCACQPGYSPSPDGGFCVDR   94 (220)
Q Consensus        59 ~~~C~~~~C~~~~-g~~~C~C~~g~~~~~~~~~C~~~   94 (220)
                      .+.|.+ .|++++ ++|.|.|++||.+..++++|.++
T Consensus         6 nggC~~-~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~   41 (59)
T 2wph_E            6 NGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPA   41 (59)
T ss_dssp             GGGCSS-EEEECSTTCEEEECCTTEEECTTSSCEEES
T ss_pred             CCCcCC-EeEeCCCCCEEeeCCCCcEECCCCCcccCC
Confidence            344643 899998 69999999999999899999875

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.13  E-value=0.00028  Score=42.45  Aligned_cols=42  Identities=29%  Similarity=0.606  Sum_probs=30.6

Q ss_pred             cccCCCCCCCCceEec-----CCCCeEeecCCCcEeCCCCCce-eecCcCCC
Q psy11800        122 DECSQNGMCANGMCIN-----MDGSFKCQCKPGFVLSPTGHAC-IDVDECYE  167 (220)
Q Consensus       122 ~~C~~~~~c~~~~C~~-----~~~~~~C~C~~G~~~~~~g~~C-~~i~~C~~  167 (220)
                      ++|...++.++|+|++     ..++|+|.|++||    .|..| .+++++..
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf----~G~~Ce~~i~~~~~   54 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGF----TGARCTENVPMKVQ   54 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTE----ESTTSCEECCSSCT
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCC----cCCccCcCcCcccc
Confidence            4554444334589986     5678999999999    78889 57887754

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=97.03  E-value=0.00053  Score=49.87  Aligned_cols=52  Identities=27%  Similarity=0.527  Sum_probs=42.4

Q ss_pred             cccccccccccccccCCCCC----CCCceEecCCCCeEeecCCCcEeCCCCCceeec
Q psy11800        110 KKKKKKKKKLYHDECSQNGM----CANGMCINMDGSFKCQCKPGFVLSPTGHACIDV  162 (220)
Q Consensus       110 ~~~~~~~~~~~~~~C~~~~~----c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i  162 (220)
                      .||.+.....++++|.....    |.+ .|++..++|.|.|.+||.+..++..|.++
T Consensus       113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~  168 (170)
T 1szb_A          113 TGFEAFYAAEDIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ  168 (170)
T ss_dssp             CEEEEEEEEEECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred             cCceeeeeccccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence            67877777778899975432    655 79999999999999999998888888654

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=96.92  E-value=0.0006  Score=58.60  Aligned_cols=58  Identities=16%  Similarity=0.181  Sum_probs=35.3

Q ss_pred             CCcccCCCCCCCCCCCCccccccCCCCCCCCCCCCccCCCCCCC-CCCeeeeC----CCceEeeCCCCCc
Q psy11800         19 GPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLIC-LNGRCDNT----LGSYRCACQPGYS   83 (220)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~C~~i~~C~~~~~~C-~~~~C~~~----~g~~~C~C~~g~~   83 (220)
                      +.|.|.+++.|..|..+..++.     |..|.+.+.|...+  | ..+.|.+.    ...+.|.|++||.
T Consensus       407 ~~C~C~~g~~G~~C~~C~~Gy~-----G~~c~~~~~C~~C~--C~~~gtc~~~~~Cd~~tg~C~C~~g~~  469 (525)
T 4aqs_A          407 GQCRCKLHVEGERCDVCKEGFY-----DLSAEDPYGCKSCA--CNPLGTIPGGNPCDSETGYCYCKRLVT  469 (525)
T ss_dssp             SCCCBCTTEETTTTCEECTTEE-----CCCTTSTTSSEECC--CCTTTBCCSSCCBCTTTCCBCBCTTCC
T ss_pred             CccCCCCCCCCCcccCCCCCCc-----CCCCCCCCCCccCC--CCCCceecCCCcccCCCCEEECCCCCc
Confidence            4566777777777665555544     66676666666544  5 33454432    2345688888887

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=96.86  E-value=0.00049  Score=54.29  Aligned_cols=50  Identities=30%  Similarity=0.585  Sum_probs=41.6

Q ss_pred             ecCcCCCC-CCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCCCC
Q psy11800        161 DVDECYEN-PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG  211 (220)
Q Consensus       161 ~i~~C~~~-~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~~~  211 (220)
                      +.|||... ++.|.+ .|.++.++|.|.|..||.+..+++.|.+.++|....
T Consensus         1 ~~~eC~~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG~   51 (283)
T 3f1s_B            1 AKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGV   51 (283)
T ss_dssp             --CCCCSSCSSSCSS-BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTTC
T ss_pred             CCCccCCCCCCCCCC-EeeCCCCCeEecCCCCcccCCCCCccccccccccCc
Confidence            35789866 567876 899999999999999999999999999988887653

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.78  E-value=0.00028  Score=59.75  Aligned_cols=76  Identities=34%  Similarity=0.856  Sum_probs=29.1

Q ss_pred             cccccCCCCCCCCCCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCcccccccccccc
Q psy11800         37 TGLSDSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKK  116 (220)
Q Consensus        37 ~~~~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~  116 (220)
                      ...|...+.+..|+ +++|.. +  |.++.|++.   +.|.|.+||+    +..|+ +                      
T Consensus       378 p~~C~~~~~g~~c~-~~~C~~-~--C~nG~C~~~---~~C~C~~G~~----G~~C~-~----------------------  423 (463)
T 2wg3_C          378 PEECRATVQPAQTL-TSECSR-L--CRNGYCTPT---GKCCCSPGWE----GDFCR-T----------------------  423 (463)
T ss_dssp             CGGGCCCCCCCCCC-CCHHHH-H--CCSEEECTT---SCEEECTTEE----STTSC-E----------------------
T ss_pred             cccCCCCCcCCCCc-cccccC-C--CCCCccCCC---CeECCCCCcC----CCcCC-c----------------------
Confidence            34455556666665 366764 3  766788653   3688888887    44452 1                      


Q ss_pred             ccccccccCCCCCCC-CceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800        117 KKLYHDECSQNGMCA-NGMCINMDGSFKCQCKPGFVLSPTGHACI  160 (220)
Q Consensus       117 ~~~~~~~C~~~~~c~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  160 (220)
                           +.|..  .|. +++|++.   ++|.|.+||    .|..|.
T Consensus       424 -----~~C~~--~C~~~g~C~~~---~~C~C~~G~----~G~~C~  454 (463)
T 2wg3_C          424 -----AKCEP--ACRHGGVCVRP---NKCLCKKGY----LGPQCE  454 (463)
T ss_dssp             -----ECC-------------------------------------
T ss_pred             -----CcCCC--CCCCCCEECCC---CEEECCCCc----ccCCCC
Confidence                 34533  444 4688765   589999999    777774

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=96.59  E-value=0.0015  Score=49.40  Aligned_cols=88  Identities=27%  Similarity=0.593  Sum_probs=56.1

Q ss_pred             CCC-CCCeeeeCCCceEeeCCCCCccCCCC------------CCccC---CCcccCCC--CCCccccccc------cccc
Q psy11800         60 LIC-LNGRCDNTLGSYRCACQPGYSPSPDG------------GFCVD---RDECRTPG--DHDECSQKKK------KKKK  115 (220)
Q Consensus        60 ~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~------------~~C~~---~~~C~~~~--~~~~C~c~~~------~~~~  115 (220)
                      ..| .+|.|+.    ..|.|.+||.+....            ..|..   ...|...+  ....|.|..+      |+|.
T Consensus        96 ~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g~C~C~~gw~~~~~~~G~  171 (217)
T 2p28_B           96 SLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQ  171 (217)
T ss_dssp             CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETTEEEECCCCSTTCCEEST
T ss_pred             CccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeCCceECCCCCCCcccEECC
Confidence            347 5689974    479999999854311            01221   11222111  2357889999      6999


Q ss_pred             cccccccccCCC--CCCC-C--ceEecCCCCeEeecCCCcEeCCCCCce
Q psy11800        116 KKKLYHDECSQN--GMCA-N--GMCINMDGSFKCQCKPGFVLSPTGHAC  159 (220)
Q Consensus       116 ~~~~~~~~C~~~--~~c~-~--~~C~~~~~~~~C~C~~G~~~~~~g~~C  159 (220)
                      +|+.+.+.|...  ..|. +  |+|...    +|.|.+||    .|..|
T Consensus       172 ~Ce~~~~~C~~~~g~~C~~~~~G~C~~g----~C~C~~G~----~G~~C  212 (217)
T 2p28_B          172 YCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGF----EGSAC  212 (217)
T ss_dssp             TSCEESSCSCEETTEETTCTTTEEEETT----EEEECTTE----ESTTS
T ss_pred             CcccCCccCCCCCCCCCCCCCCcEEeCC----eeECCCCC----ccCCc
Confidence            998777778643  2353 4  899852    89999999    66666

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.47  E-value=0.0012  Score=38.22  Aligned_cols=29  Identities=41%  Similarity=0.962  Sum_probs=24.7

Q ss_pred             CCCC-CeEe--cCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        171 ICLN-GRCD--NTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       171 ~C~~-~~C~--~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      +|.| |+|+  +..++|.|.|++||.    |..|+.
T Consensus        13 pC~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~   44 (53)
T 1nql_B           13 YCLHDGVCMYIEALDKYACNCVVGYI----GERCQY   44 (53)
T ss_dssp             EECTTCEEEEETTTTEEEEEECTTEE----STTSCE
T ss_pred             CCCCCeEEeeecCCCCEEEecCCCCc----CCCCCc
Confidence            4887 7998  677889999999999    999963

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.29  E-value=0.0018  Score=46.49  Aligned_cols=41  Identities=29%  Similarity=0.756  Sum_probs=29.9

Q ss_pred             ccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCC
Q psy11800        123 ECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYE  167 (220)
Q Consensus       123 ~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~  167 (220)
                      +|....+-.+++|++..++|+|+|++||    .|..|+.+++|..
T Consensus       121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g~----~G~~Ce~~~~c~~  161 (162)
T 1g1s_A          121 SCQDMSCSKQGECLETIGNYTCSCYPGF----YGPECEYVRDDDD  161 (162)
T ss_dssp             CCCTTGGGGSEEEEECSSSEEEEECTTE----ESTTSCEECC---
T ss_pred             CCcCCCCCCCCEEecCCCCceEeCCCCC----cCcccccCcccCC
Confidence            4443333345899999999999999999    7788988888864

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.24  E-value=0.0038  Score=44.60  Aligned_cols=45  Identities=31%  Similarity=0.691  Sum_probs=35.4

Q ss_pred             ceeecCcCCCC-CCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        158 ACIDVDECYEN-PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       158 ~C~~i~~C~~~-~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      .+.++++|... ...|.+ .|.+..++|.|.|.+||.+..+++.|++
T Consensus       113 ~~~d~~eC~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~~~~~C~~  158 (159)
T 1nzi_A          113 VATDINECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCGV  158 (159)
T ss_dssp             EEEECCTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred             ecccCcccCCCCCCCCCC-cccCcCCCEEEecCCCcEECCCCCcccc
Confidence            35678999753 234754 8999999999999999999888888864

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=96.03  E-value=0.006  Score=43.94  Aligned_cols=27  Identities=26%  Similarity=0.613  Sum_probs=19.8

Q ss_pred             C-CCCeeeeCC--CceEe-eCCCCCccCCCCCCcc
Q psy11800         62 C-LNGRCDNTL--GSYRC-ACQPGYSPSPDGGFCV   92 (220)
Q Consensus        62 C-~~~~C~~~~--g~~~C-~C~~g~~~~~~~~~C~   92 (220)
                      | ++++|....  +.++| .|+++|.    +..|+
T Consensus         3 C~~~g~C~~~~~~g~~~C~~C~~g~~----G~~Ce   33 (162)
T 1klo_A            3 CPGGSSCAIVPKTKEVVCTHCPTGTA----GKRCE   33 (162)
T ss_dssp             SCTTCCEEECSSSCCEEECSCCTTEE----STTSC
T ss_pred             CcCcCcccccCCCCCEEeCCCCCCCc----CCCCc
Confidence            6 457898765  57899 6999998    45554

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=95.75  E-value=0.0056  Score=35.29  Aligned_cols=27  Identities=41%  Similarity=1.016  Sum_probs=21.6

Q ss_pred             C-CCCeee--eCCCceEeeCCCCCccCCCCCCcc
Q psy11800         62 C-LNGRCD--NTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        62 C-~~~~C~--~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      | +.++|+  +..++|.|.|++||+    |..|+
T Consensus        14 C~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce   43 (53)
T 1nql_B           14 CLHDGVCMYIEALDKYACNCVVGYI----GERCQ   43 (53)
T ss_dssp             ECTTCEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred             CCCCeEEeeecCCCCEEEecCCCCc----CCCCC
Confidence            8 458998  667889999999998    55564

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=95.68  E-value=0.0034  Score=50.92  Aligned_cols=41  Identities=34%  Similarity=0.809  Sum_probs=25.8

Q ss_pred             CCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCC
Q psy11800         52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDR   94 (220)
Q Consensus        52 i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~   94 (220)
                      ||||. .++.|.+ .|+++.++|.|.|.+||.+..++++|...
T Consensus         1 i~ec~-~~~~C~~-~C~n~~g~~~C~C~~g~~l~~d~~~C~~~   41 (349)
T 3v64_C            1 VNECA-EEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKAL   41 (349)
T ss_dssp             ---------CCSS-EECCC---CCEECCTTEEECTTSSCEEES
T ss_pred             CcccC-CCCCCcC-eeecCCCCeEEECCCCccCCCCCCccccc
Confidence            47887 4566864 99999999999999999998888888643

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=95.62  E-value=0.012  Score=33.45  Aligned_cols=34  Identities=29%  Similarity=0.714  Sum_probs=26.4

Q ss_pred             CCCCCCeEecC--CCCeEEeCCCCCccCCCCCCCCcCCCC
Q psy11800        170 LICLNGRCDNT--LGSYRCACQPGYSPSPDGGFCVDRDEC  207 (220)
Q Consensus       170 ~~C~~~~C~~~--~~~~~C~C~~G~~~~~~g~~C~~~~~C  207 (220)
                      ..|.||+|...  ...+.|+|++||.    |..|+..+.+
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe~~dL~   49 (50)
T 3e50_C           14 QFCFHGTCRFLVQEDKPACVCHSGYV----GARCEHADLL   49 (50)
T ss_pred             CcccCCEEeeccCCCCeEEECCCCCc----ccCCCceeec
Confidence            34778888753  4678999999999    9999866543

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.58  E-value=0.0042  Score=36.57  Aligned_cols=29  Identities=38%  Similarity=0.902  Sum_probs=23.4

Q ss_pred             CCC-CeEec----CCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800        172 CLN-GRCDN----TLGSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       172 C~~-~~C~~----~~~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      |.| |+|+.    ....|.|.|++||.    |..|+..
T Consensus        16 C~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce~~   49 (58)
T 3ltf_D           16 CLNDAHCFAVKIADLPVYSCECAIGFM----GQRCEYK   49 (58)
T ss_dssp             SCSSCEEEEEEETTEEEEEEEECTTEE----SSSSCEE
T ss_pred             CCCCCEEeCCccCCCCCEEeECCCCCc----cCCCccc
Confidence            877 79983    44579999999999    9999743

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=95.55  E-value=0.003  Score=36.29  Aligned_cols=26  Identities=27%  Similarity=0.764  Sum_probs=19.5

Q ss_pred             CCceEec----CCCCeEeecCCCcEeCCCCCcee
Q psy11800        131 ANGMCIN----MDGSFKCQCKPGFVLSPTGHACI  160 (220)
Q Consensus       131 ~~~~C~~----~~~~~~C~C~~G~~~~~~g~~C~  160 (220)
                      ++|+|+.    ..+.|+|.|++||    .|..|+
T Consensus        18 NGGtC~~~~~~~~~~y~C~C~~Gf----~G~~Ce   47 (52)
T 3ca7_A           18 NDAHCFAVKIADLPVYSCECAIGF----MGQRCE   47 (52)
T ss_dssp             TTCEEEEEEETTEEEEEEECCTTE----ESTTSC
T ss_pred             CCCEEecCccCCCCCEEEECCCCC----cCCCCc
Confidence            3468886    3457999999999    677773

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=95.51  E-value=0.0085  Score=48.52  Aligned_cols=42  Identities=33%  Similarity=0.980  Sum_probs=26.8

Q ss_pred             cccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCc
Q psy11800        122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDE  164 (220)
Q Consensus       122 ~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~  164 (220)
                      |+|.....|.+ .|++.+++|+|.|.+||.+.+++..|..+++
T Consensus         2 ~ec~~~~~C~~-~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~   43 (349)
T 3v64_C            2 NECAEEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALGP   43 (349)
T ss_dssp             -------CCSS-EECCC---CCEECCTTEEECTTSSCEEESSS
T ss_pred             cccCCCCCCcC-eeecCCCCeEEECCCCccCCCCCCccccccc
Confidence            56653345655 8999999999999999999888999976543

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.45  E-value=0.013  Score=41.70  Aligned_cols=50  Identities=22%  Similarity=0.445  Sum_probs=37.9

Q ss_pred             cccccccccccccccCCC--CCCCCceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800        110 KKKKKKKKKLYHDECSQN--GMCANGMCINMDGSFKCQCKPGFVLSPTGHACI  160 (220)
Q Consensus       110 ~~~~~~~~~~~~~~C~~~--~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  160 (220)
                      .||.......++++|...  ..|. ..|.+..++|+|.|.+||.+..+++.|.
T Consensus       106 ~GF~~~y~~~d~~eC~~~~~~~C~-~~C~n~~g~~~C~C~~Gy~l~~~~~~C~  157 (159)
T 1nzi_A          106 TGFAAYYVATDINECTDFVDVPCS-HFCNNFIGGYFCSCPPEYFLHDDMKNCG  157 (159)
T ss_dssp             CEEEEEEEEEECCTTTC-CCCCSS-SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             ccceeeeecccCcccCCCCCCCCC-CcccCcCCCEEEecCCCcEECCCCCccc
Confidence            466666666677888753  3454 4799999999999999999887788775

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=95.43  E-value=0.006  Score=47.99  Aligned_cols=47  Identities=32%  Similarity=0.659  Sum_probs=38.0

Q ss_pred             CCccCCC-CCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccC
Q psy11800         52 VDECYEN-PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT   99 (220)
Q Consensus        52 i~~C~~~-~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~   99 (220)
                      .|||..+ ++.|.+ .|.++.++|+|.|..||.+..++..|...++|.-
T Consensus         2 ~~eC~~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~C   49 (283)
T 3f1s_B            2 KNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCAC   49 (283)
T ss_dssp             -CCCCSSCSSSCSS-BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCT
T ss_pred             CCccCCCCCCCCCC-EeeCCCCCeEecCCCCcccCCCCCcccccccccc
Confidence            5788876 667854 8999999999999999999888889987665543

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=94.99  E-value=0.014  Score=50.33  Aligned_cols=36  Identities=42%  Similarity=0.963  Sum_probs=30.4

Q ss_pred             CCccCCCCCCC-CCCeeee-CCCceEeeCC-CCCccCCCCCCccC
Q psy11800         52 VDECYENPLIC-LNGRCDN-TLGSYRCACQ-PGYSPSPDGGFCVD   93 (220)
Q Consensus        52 i~~C~~~~~~C-~~~~C~~-~~g~~~C~C~-~g~~~~~~~~~C~~   93 (220)
                      +|+|.++|  | ++|.|++ ..++|.|.|+ +||+    |..|+.
T Consensus         2 ~d~C~~~P--C~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~   40 (553)
T 1q4g_A            2 VNPCCYYP--CQHQGICVRFGLDRYQCDCTRTGYS----GPNCTI   40 (553)
T ss_dssp             CCGGGGCC--CCTTCEEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred             CCcCCCCC--CCCCCCcCCCCCCceEeeCCCCCcC----CCCCCC
Confidence            57899888  9 5599999 8899999999 9999    566653

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=94.66  E-value=0.028  Score=44.88  Aligned_cols=42  Identities=26%  Similarity=0.477  Sum_probs=33.0

Q ss_pred             cCcCCCCCCCCCCCeEecCCC--CeEEeCCCCCccCCCCCCCCcC
Q psy11800        162 VDECYENPLICLNGRCDNTLG--SYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       162 i~~C~~~~~~C~~~~C~~~~~--~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      .++|......|.+ .|...++  +|.|.|+.||.+..+++.|.+-
T Consensus       267 ~n~C~~~ng~Cs~-~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~  310 (318)
T 3sov_A          267 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKDG  310 (318)
T ss_dssp             CCTTTTTGGGCSS-EEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred             ccccccCCCCcce-EEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence            4677655555765 7998765  7999999999999999999764

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=94.65  E-value=0.024  Score=45.12  Aligned_cols=41  Identities=24%  Similarity=0.434  Sum_probs=32.7

Q ss_pred             ecCcCCCC---CCCCCCCeEecCC------CCeEEeCCCCCccCCCCCCCC
Q psy11800        161 DVDECYEN---PLICLNGRCDNTL------GSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       161 ~i~~C~~~---~~~C~~~~C~~~~------~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      ..++|...   .+.|.+ .|.+.+      ++|.|.|+.||.+..+++.|.
T Consensus       266 ~~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~  315 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL  315 (316)
T ss_dssp             CCCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             ccccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence            45788765   445865 899875      589999999999999999885

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=94.52  E-value=0.025  Score=32.03  Aligned_cols=30  Identities=33%  Similarity=0.855  Sum_probs=23.8

Q ss_pred             CCCCCeEe--cCCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800        171 ICLNGRCD--NTLGSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       171 ~C~~~~C~--~~~~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      .|.||+|.  ...+.+.|+|++||.    |..|+..
T Consensus        15 yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe~~   46 (50)
T 1iox_A           15 YCIKGRCRFVVAEQTPSCVCDEGYI----GARCERV   46 (50)
T ss_dssp             SCTTCCEEEETTTTEEEECCCTTEE----TTTTCEE
T ss_pred             cccCCEEEeEcCCCCeEEECCCCcc----cCCCCee
Confidence            47778886  455678999999999    9999743

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=94.33  E-value=0.029  Score=48.65  Aligned_cols=36  Identities=33%  Similarity=1.000  Sum_probs=29.1

Q ss_pred             CCccCCCCCCC-CCCeeee-CCCceEeeCC-CCCccCCCCCCccC
Q psy11800         52 VDECYENPLIC-LNGRCDN-TLGSYRCACQ-PGYSPSPDGGFCVD   93 (220)
Q Consensus        52 i~~C~~~~~~C-~~~~C~~-~~g~~~C~C~-~g~~~~~~~~~C~~   93 (220)
                      +++|.++|  | ++|+|++ ..++|.|.|+ +||+    |..|+.
T Consensus         1 vd~C~s~P--C~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNP--CQNRGECMSTGFDQYKCDCTRTGFY----GENCTT   39 (587)
T ss_dssp             CCTTTTCC--CCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred             CCCCCCCC--CCCCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence            57899888  9 5589996 4589999999 9998    566653

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=94.29  E-value=0.024  Score=49.72  Aligned_cols=43  Identities=26%  Similarity=0.558  Sum_probs=36.1

Q ss_pred             ecCcCCCCCCCCCCCeEecCC-CCeEEeCCCCCccCCCCCCCCcC
Q psy11800        161 DVDECYENPLICLNGRCDNTL-GSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       161 ~i~~C~~~~~~C~~~~C~~~~-~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      .+++|....+.|.+ .|.+.+ ++|.|.|+.||.+.++++.|...
T Consensus       264 ~~n~C~~~ng~C~~-~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~  307 (628)
T 4a0p_A          264 GWNECASSNGHCSH-LCLAVPVGGFVCGCPAHYSLNADNRTCSAP  307 (628)
T ss_dssp             CCCTTTTTGGGCSS-EEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred             cceEeccCCCCcch-hhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence            46888866556865 899988 89999999999999999999654

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=94.26  E-value=0.042  Score=37.50  Aligned_cols=41  Identities=32%  Similarity=0.826  Sum_probs=29.7

Q ss_pred             CCC-CeEecCC--CCe-EEeCCCCCccCCCCCCCC-cCC-CCCCCCC-CceE
Q psy11800        172 CLN-GRCDNTL--GSY-RCACQPGYSPSPDGGFCV-DRD-ECRTPGG-KYTA  216 (220)
Q Consensus       172 C~~-~~C~~~~--~~~-~C~C~~G~~~~~~g~~C~-~~~-~C~~~~~-~~~~  216 (220)
                      |.| ++|++..  ..| .|.|++||.    |.+|+ +++ +|....| .|.+
T Consensus         3 C~nggtC~~~~~~~~~~~C~Cp~g~~----G~~Ce~~~~~~C~~g~G~~YrG   50 (122)
T 2fd6_A            3 CLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCEIDKSKTCYEGNGHFYRG   50 (122)
T ss_dssp             CCSSCEEEECTTTTTCEEEECCTTEE----STTSCEESSCCSBCSSCTTCCS
T ss_pred             CCCcCCcCCCcccCCCCCccCCCCCC----CccccccCcCCCccccccccee
Confidence            777 7998874  455 999999999    89997 343 6875533 3554

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=94.12  E-value=0.15  Score=33.40  Aligned_cols=61  Identities=28%  Similarity=0.581  Sum_probs=43.9

Q ss_pred             C-CCCeeee-CCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCC-CCC-CCceEec
Q psy11800         62 C-LNGRCDN-TLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN-GMC-ANGMCIN  137 (220)
Q Consensus        62 C-~~~~C~~-~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~-~~c-~~~~C~~  137 (220)
                      | .++.|.. ..+.-+|.|..||..  ++..|..++.                          .|..+ ..| .++.|..
T Consensus        18 Cp~NA~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~Np--------------------------~C~~nNGGCd~nAeC~~   69 (105)
T 1n1i_A           18 VPENAACYRYLDGTEEWRCLLGFKE--VGGKCVPASI--------------------------TCEENNGGCAPEAECTM   69 (105)
T ss_dssp             CCTTEEEEECTTSCEEEEECTTEEE--CSSSEEECCC--------------------------CTTSGGGGSCTTSEEEE
T ss_pred             CCCCCCeEECCCCCEeEEEECCeec--cCCEEEECCc--------------------------chhhcCCCcCCCcEeEE
Confidence            5 6789988 568899999999997  4677776543                          03222 233 4678887


Q ss_pred             CC-CCeEeecCCCc
Q psy11800        138 MD-GSFKCQCKPGF  150 (220)
Q Consensus       138 ~~-~~~~C~C~~G~  150 (220)
                      .. ....|.|..+|
T Consensus        70 ~~~~ki~C~C~~~~   83 (105)
T 1n1i_A           70 DDKKEVECKCTKEG   83 (105)
T ss_dssp             CTTSCEEEECCSTT
T ss_pred             CCCCEEEeECCCCC
Confidence            74 67899999997

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=93.77  E-value=0.065  Score=30.29  Aligned_cols=37  Identities=30%  Similarity=0.784  Sum_probs=26.4

Q ss_pred             cCcCCCC-CCCCCCCeEe--cCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        162 VDECYEN-PLICLNGRCD--NTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       162 i~~C~~~-~~~C~~~~C~--~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      .++|... ...|.||+|.  ...+.+.|+|+.||.    |..|+
T Consensus         9 ~~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~----G~RCe   48 (50)
T 2rnl_A            9 KNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYF----GERCG   48 (50)
T ss_dssp             CCTTTTTGGGTCSSSEEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred             CcccCchhhCcCCCCEEEEecCCCCeeEECCCCcc----ccccc
Confidence            3455431 2348888997  455678999999999    88886

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=93.75  E-value=0.031  Score=34.83  Aligned_cols=38  Identities=34%  Similarity=0.879  Sum_probs=26.0

Q ss_pred             cCcCCC-CCCCCCCCeEec--CCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        162 VDECYE-NPLICLNGRCDN--TLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       162 i~~C~~-~~~~C~~~~C~~--~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      .++|.. ....|.||.|+.  ..+.+.|.|.+||.    |..|+.
T Consensus        37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYt----G~RCE~   77 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYH----GERCHG   77 (79)
T ss_dssp             --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEE----STTCCE
T ss_pred             CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcc----cccccc
Confidence            355652 123588888953  34678999999999    888863

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=93.71  E-value=0.076  Score=34.52  Aligned_cols=62  Identities=29%  Similarity=0.709  Sum_probs=42.4

Q ss_pred             C-CCCeeeeC-CCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCC-CCC-CCceEec
Q psy11800         62 C-LNGRCDNT-LGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN-GMC-ANGMCIN  137 (220)
Q Consensus        62 C-~~~~C~~~-~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~-~~c-~~~~C~~  137 (220)
                      | .++.|... .+..+|+|.+||.+  ++..|..+..                         +.|... ..| .++.|..
T Consensus        12 C~~NA~C~r~~~g~e~C~C~~gy~g--dg~~Cv~~~~-------------------------~sC~~nNGGCd~nA~C~~   64 (99)
T 1ob1_C           12 CPQNSGCFRHLDEREECKCLLNYKQ--EGDKCVENPN-------------------------PTCNENNGGCDADAKCTE   64 (99)
T ss_dssp             CCTTEEEECCTTSCCEEEECTTEEE--ETTEEEECSC-------------------------CCSTTGGGGCCTTEEEEC
T ss_pred             CCCCCCeEEcCCCCEEEEecCCeec--CCCeEeeCCC-------------------------CChhhcCCCcCCCceeEe
Confidence            5 56889874 58899999999997  4566665410                         234332 333 4678877


Q ss_pred             CC-----CCeEeecCCCc
Q psy11800        138 MD-----GSFKCQCKPGF  150 (220)
Q Consensus       138 ~~-----~~~~C~C~~G~  150 (220)
                      ..     +...|.|.+||
T Consensus        65 ~~~~~~~~ki~C~C~~g~   82 (99)
T 1ob1_C           65 EDSGSNGKKITCECTKPD   82 (99)
T ss_dssp             CSCSSSSCCCEEEECSTT
T ss_pred             cCCcccCCceEeEeCCCC
Confidence            64     56899999997

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=93.15  E-value=0.048  Score=39.15  Aligned_cols=22  Identities=9%  Similarity=-0.126  Sum_probs=16.0

Q ss_pred             CCc-ccCCCCCCCCCCCCccccc
Q psy11800         19 GPA-VVHSTYTGLSETQTYTGLS   40 (220)
Q Consensus        19 ~~~-~~~~~~~~~~~~~~~~~~~   40 (220)
                      +.| .|.++|+|..|.++-.++.
T Consensus        18 ~~C~~C~~g~~G~~Ce~C~~g~~   40 (162)
T 1klo_A           18 VVCTHCPTGTAGKRCELCDDGYF   40 (162)
T ss_dssp             EEECSCCTTEESTTSCEECTTEE
T ss_pred             EEeCCCCCCCcCCCCcCCCCCCc
Confidence            356 5788888888887766665

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=92.62  E-value=0.048  Score=47.72  Aligned_cols=41  Identities=27%  Similarity=0.498  Sum_probs=32.4

Q ss_pred             cCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        162 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       162 i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      .++|....+.|.+ .|.+.+++|.|.|+.||.+..+++.|..
T Consensus       578 ~~~C~~~ng~C~~-~C~~~~~~~~C~C~~g~~l~~d~~~C~~  618 (619)
T 3s94_A          578 SNPCAEENGGCSH-LCLYRPQGLRCACPIGFELISDMKTCIV  618 (619)
T ss_dssp             CCGGGSGGGGCSS-EEEEETTEEEEECCTTCEECSSTTCEEC
T ss_pred             cccCCCCCCChhH-hhccCCCCeEEECCCCCEECCCCCcCCC
Confidence            3556554445654 8999999999999999999999988853

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=92.54  E-value=0.18  Score=34.33  Aligned_cols=53  Identities=17%  Similarity=0.415  Sum_probs=34.9

Q ss_pred             C-CCCeeeeCC--Cce-EeeCCCCCccCCCCCCccCC--CcccCC-CCCCcccccccccccccc
Q psy11800         62 C-LNGRCDNTL--GSY-RCACQPGYSPSPDGGFCVDR--DECRTP-GDHDECSQKKKKKKKKKK  118 (220)
Q Consensus        62 C-~~~~C~~~~--g~~-~C~C~~g~~~~~~~~~C~~~--~~C~~~-~~~~~C~c~~~~~~~~~~  118 (220)
                      | ++++|++..  ..| .|.|++||+    +..|+..  .+|... +..+.+.+..++.|..|.
T Consensus         3 C~nggtC~~~~~~~~~~~C~Cp~g~~----G~~Ce~~~~~~C~~g~G~~YrG~~~~t~sG~~Cq   62 (122)
T 2fd6_A            3 CLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCL   62 (122)
T ss_dssp             CCSSCEEEECTTTTTCEEEECCTTEE----STTSCEESSCCSBCSSCTTCCSCCCBBTTSCBBC
T ss_pred             CCCcCCcCCCcccCCCCCccCCCCCC----CccccccCcCCCcccccccceeeccccccCCccc
Confidence            7 458999874  455 999999998    5666532  245433 345666666666665554

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=92.21  E-value=0.12  Score=29.17  Aligned_cols=30  Identities=27%  Similarity=0.812  Sum_probs=23.0

Q ss_pred             CCCCCceEecC--CCCeEeecCCCcEeCCCCCceee
Q psy11800        128 GMCANGMCINM--DGSFKCQCKPGFVLSPTGHACID  161 (220)
Q Consensus       128 ~~c~~~~C~~~--~~~~~C~C~~G~~~~~~g~~C~~  161 (220)
                      ..|.||+|+..  .+.+.|.|.+||    .|..|..
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy----~G~RCe~   45 (50)
T 3e50_C           14 QFCFHGTCRFLVQEDKPACVCHSGY----VGARCEH   45 (50)
T ss_pred             CcccCCEEeeccCCCCeEEECCCCC----cccCCCc
Confidence            55677889754  366899999999    7888753

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=91.98  E-value=0.93  Score=28.89  Aligned_cols=61  Identities=21%  Similarity=0.446  Sum_probs=47.4

Q ss_pred             CCceEecC-CCCeEeecCCCcEeCCCCCceeecC--cCCCCCCCCC-CCeEecCC-CCeEEeCCCCCc
Q psy11800        131 ANGMCINM-DGSFKCQCKPGFVLSPTGHACIDVD--ECYENPLICL-NGRCDNTL-GSYRCACQPGYS  193 (220)
Q Consensus       131 ~~~~C~~~-~~~~~C~C~~G~~~~~~g~~C~~i~--~C~~~~~~C~-~~~C~~~~-~~~~C~C~~G~~  193 (220)
                      .++.|+.. .+.-.|+|..+|..  .+..|+.-+  .|..+.+.|. ++.|.... ..-.|.|...+.
T Consensus        14 ~NA~Cyr~~dg~EecRCllnykk--~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~   79 (95)
T 1b9w_A           14 ENAACYRYLDGTEEWRCLLYFKE--DAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS   79 (95)
T ss_dssp             TTEEEEECTTSCEEEEECTTEEE--ETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred             CCcCeEEEcCCCEEEEEECCeEe--cCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence            36788875 46788999999977  577785443  7887777797 59998877 678999998765

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=91.92  E-value=0.16  Score=40.47  Aligned_cols=42  Identities=26%  Similarity=0.477  Sum_probs=32.0

Q ss_pred             CCccCCCCCCCCCCeeeeCCC--ceEeeCCCCCccCCCCCCccCC
Q psy11800         52 VDECYENPLICLNGRCDNTLG--SYRCACQPGYSPSPDGGFCVDR   94 (220)
Q Consensus        52 i~~C~~~~~~C~~~~C~~~~g--~~~C~C~~g~~~~~~~~~C~~~   94 (220)
                      .++|..+.+.|.+ .|...++  +|.|.|+.||.+..+++.|.+.
T Consensus       267 ~n~C~~~ng~Cs~-~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~  310 (318)
T 3sov_A          267 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKDG  310 (318)
T ss_dssp             CCTTTTTGGGCSS-EEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred             ccccccCCCCcce-EEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence            4667655555753 7887765  7999999999999899999875

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=91.89  E-value=0.074  Score=31.07  Aligned_cols=28  Identities=32%  Similarity=0.800  Sum_probs=20.7

Q ss_pred             C-CCCeeee----CCCceEeeCCCCCccCCCCCCccC
Q psy11800         62 C-LNGRCDN----TLGSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        62 C-~~~~C~~----~~g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      | +.|+|+.    ..+.|.|.|++||.    |..|+.
T Consensus        16 C~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce~   48 (58)
T 3ltf_D           16 CLNDAHCFAVKIADLPVYSCECAIGFM----GQRCEY   48 (58)
T ss_dssp             SCSSCEEEEEEETTEEEEEEEECTTEE----SSSSCE
T ss_pred             CCCCCEEeCCccCCCCCEEeECCCCCc----cCCCcc
Confidence            7 5589983    34579999999998    556653

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=91.42  E-value=0.13  Score=45.09  Aligned_cols=42  Identities=26%  Similarity=0.581  Sum_probs=34.5

Q ss_pred             CCCccCCCCCCCCCCeeeeCC-CceEeeCCCCCccCCCCCCccC
Q psy11800         51 NVDECYENPLICLNGRCDNTL-GSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        51 ~i~~C~~~~~~C~~~~C~~~~-g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      .+++|..+.+.|.+ .|.+.+ ++|.|.|+.||.+..++++|..
T Consensus       264 ~~n~C~~~ng~C~~-~C~~~~~~~~~C~C~~g~~l~~d~~~C~~  306 (628)
T 4a0p_A          264 GWNECASSNGHCSH-LCLAVPVGGFVCGCPAHYSLNADNRTCSA  306 (628)
T ss_dssp             CCCTTTTTGGGCSS-EEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred             cceEeccCCCCcch-hhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence            46788866566753 899988 8999999999999888888864

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=91.37  E-value=0.23  Score=28.00  Aligned_cols=29  Identities=24%  Similarity=0.750  Sum_probs=22.2

Q ss_pred             CCCCCceEe--cCCCCeEeecCCCcEeCCCCCcee
Q psy11800        128 GMCANGMCI--NMDGSFKCQCKPGFVLSPTGHACI  160 (220)
Q Consensus       128 ~~c~~~~C~--~~~~~~~C~C~~G~~~~~~g~~C~  160 (220)
                      ..|.||+|+  ...+.+.|.|+.||    .|..|.
T Consensus        18 ~yC~nG~C~~i~~~~~~~C~C~~gy----~G~RCe   48 (50)
T 2rnl_A           18 NFCIHGECKYIEHLEAVTCKCQQEY----FGERCG   48 (50)
T ss_dssp             GTCSSSEEEEETTTTEEEEECCSSC----CSSSCC
T ss_pred             CcCCCCEEEEecCCCCeeEECCCCc----cccccc
Confidence            556778997  44567899999999    777763

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=91.16  E-value=0.16  Score=40.15  Aligned_cols=41  Identities=24%  Similarity=0.437  Sum_probs=30.9

Q ss_pred             CCCccCCC---CCCCCCCeeeeCC------CceEeeCCCCCccCCCCCCcc
Q psy11800         51 NVDECYEN---PLICLNGRCDNTL------GSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        51 ~i~~C~~~---~~~C~~~~C~~~~------g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      ..++|..+   .+.|.+ .|.+.+      ++|.|.|+.||.+..++++|.
T Consensus       266 ~~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~  315 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL  315 (316)
T ss_dssp             CCCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             ccccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence            35677755   445753 888775      579999999999988888874

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=90.94  E-value=0.082  Score=43.88  Aligned_cols=25  Identities=8%  Similarity=-0.069  Sum_probs=14.9

Q ss_pred             CcccCCCCCCCCCCCCccccccCCC
Q psy11800         20 PAVVHSTYTGLSETQTYTGLSDSLS   44 (220)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~   44 (220)
                      .|.|..++.|..|.+|..++.+.+|
T Consensus       314 ~C~C~~~ttG~~CE~C~pgy~~~P~  338 (426)
T 3zyj_B          314 TCECEHNTTGPDCGKCKKNYQGRPW  338 (426)
T ss_dssp             EECCCTTEESSSSCEECTTCCSSCC
T ss_pred             eeeCCCCCcCCCccccccccccCcc
Confidence            4566666666666666666554444

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=90.68  E-value=0.13  Score=44.34  Aligned_cols=35  Identities=23%  Similarity=0.777  Sum_probs=28.4

Q ss_pred             cccCCCCCCCCceEec-CCCCeEeecC-CCcEeCCCCCcee
Q psy11800        122 DECSQNGMCANGMCIN-MDGSFKCQCK-PGFVLSPTGHACI  160 (220)
Q Consensus       122 ~~C~~~~~c~~~~C~~-~~~~~~C~C~-~G~~~~~~g~~C~  160 (220)
                      |+|..+++.++|+|.+ ..++|+|.|. +||    .|.+|+
T Consensus         3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~----~G~~Ce   39 (553)
T 1q4g_A            3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGY----SGPNCT   39 (553)
T ss_dssp             CGGGGCCCCTTCEEEEETTTEEEEECTTSSE----ETTTTC
T ss_pred             CcCCCCCCCCCCCcCCCCCCceEeeCCCCCc----CCCCCC
Confidence            6776666556689999 8889999999 999    777883

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=90.61  E-value=0.19  Score=28.30  Aligned_cols=29  Identities=28%  Similarity=0.771  Sum_probs=22.1

Q ss_pred             CCCCCceEe--cCCCCeEeecCCCcEeCCCCCcee
Q psy11800        128 GMCANGMCI--NMDGSFKCQCKPGFVLSPTGHACI  160 (220)
Q Consensus       128 ~~c~~~~C~--~~~~~~~C~C~~G~~~~~~g~~C~  160 (220)
                      ..|.||+|+  ...+.+.|.|++||    .|..|+
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy----~G~RCe   44 (50)
T 1iox_A           14 HYCIKGRCRFVVAEQTPSCVCDEGY----IGARCE   44 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTE----ETTTTC
T ss_pred             CcccCCEEEeEcCCCCeEEECCCCc----ccCCCC
Confidence            556678885  44567899999999    788874

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=90.54  E-value=0.25  Score=40.96  Aligned_cols=94  Identities=20%  Similarity=0.422  Sum_probs=22.4

Q ss_pred             CeeeeCCCceEeeCCCCCccCCCCCCcc---CC---CcccC-------CCCCCccc-cccccccccccccccccCCCCCC
Q psy11800         65 GRCDNTLGSYRCACQPGYSPSPDGGFCV---DR---DECRT-------PGDHDECS-QKKKKKKKKKKLYHDECSQNGMC  130 (220)
Q Consensus        65 ~~C~~~~g~~~C~C~~g~~~~~~~~~C~---~~---~~C~~-------~~~~~~C~-c~~~~~~~~~~~~~~~C~~~~~c  130 (220)
                      ..|....+.+.|.|+.++.+    ..|+   ..   ..+..       ......|. |.-.+.+..|.....+|     .
T Consensus       304 s~C~~~~g~~~C~C~~~ttG----~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C-----~  374 (426)
T 3zyj_B          304 TVCVYDNSKLTCECEHNTTG----PDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHC-----Q  374 (426)
T ss_dssp             SCEEEETTEEEECCCTTEES----SSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC--------------------
T ss_pred             hhcCCCCCCceeeCCCCCcC----CCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccC-----C
Confidence            57887777899999999884    3343   11   11111       11223342 22233344454433333     1


Q ss_pred             CCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEecCCC
Q psy11800        131 ANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTLG  182 (220)
Q Consensus       131 ~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~~  182 (220)
                      ++++|.+..   +|.|++||    .|..|..   |     .|.+ |.|....|
T Consensus       375 ngg~C~~~~---~C~C~~G~----~G~~Ce~---c-----~C~~~g~C~~~~G  412 (426)
T 3zyj_B          375 NGGTCHNNV---RCLCPAAY----TGILCEK---L-----RCEEAGSCGSDSG  412 (426)
T ss_dssp             -----------------------------------------------------
T ss_pred             CCCCcCCCC---CCcCCCCC----cCCCCcC---C-----CCCCCCcccCCCC
Confidence            235777654   89999999    6666632   1     2554 56665444

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=90.19  E-value=0.094  Score=36.98  Aligned_cols=34  Identities=38%  Similarity=1.029  Sum_probs=27.8

Q ss_pred             CcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        163 DECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       163 ~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      ++|...+  |.+ +.|.+....|.|.|.+||.    |.+|+
T Consensus       120 ~~~~~~p--c~~~g~C~~~~~~~~c~C~~g~~----g~~Ce  154 (157)
T 1g1t_A          120 AACTNTS--CSGHGECVETINNYTCKCDPGFS----GLKCE  154 (157)
T ss_dssp             CCCCTTG--GGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred             CCCCCCC--CCCCCEeecCCCCeeEECCCCcc----Ccccc
Confidence            4455444  764 8999999999999999999    88886

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=88.97  E-value=0.41  Score=41.86  Aligned_cols=41  Identities=27%  Similarity=0.510  Sum_probs=32.5

Q ss_pred             cCcCCCCCCCCCCCeEecCC--CCeEEeCCCCCccCCCCCCCCc
Q psy11800        162 VDECYENPLICLNGRCDNTL--GSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       162 i~~C~~~~~~C~~~~C~~~~--~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      .++|......|.+ .|...+  .+|.|.|+.||.+..+++.|.+
T Consensus       272 ~n~C~~~ng~Cs~-lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~  314 (619)
T 3s94_A          272 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKD  314 (619)
T ss_dssp             CCTTTTTGGGCSS-EEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred             cccccCCCCcccc-eEECCCCCCCceEeCCchheecccCcccCC
Confidence            4667665556765 898876  4799999999999999999975

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=88.40  E-value=0.21  Score=31.04  Aligned_cols=23  Identities=39%  Similarity=1.122  Sum_probs=16.9

Q ss_pred             CCCCeeeeC--CCceEeeCCCCCcc
Q psy11800         62 CLNGRCDNT--LGSYRCACQPGYSP   84 (220)
Q Consensus        62 C~~~~C~~~--~g~~~C~C~~g~~~   84 (220)
                      |.||.|+-.  .+.+.|.|.+||++
T Consensus        48 ClnG~C~~i~~~~~~~C~C~~GYtG   72 (79)
T 1xdt_R           48 CIHGECKYVKELRAPSCICHPGYHG   72 (79)
T ss_dssp             CSSEEECCBGGGTBCCEEECTTEES
T ss_pred             CCCCEeeeecCCCCeEEEcCCCccc
Confidence            866789533  35688999999983

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=88.05  E-value=0.42  Score=39.40  Aligned_cols=36  Identities=33%  Similarity=0.877  Sum_probs=30.4

Q ss_pred             cCcCCCCCCCCCC-CeEecCCCCeEEeCCC-CCccCCCCCCCCc
Q psy11800        162 VDECYENPLICLN-GRCDNTLGSYRCACQP-GYSPSPDGGFCVD  203 (220)
Q Consensus       162 i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~-G~~~~~~g~~C~~  203 (220)
                      .+.|...+  |.| +.|++...+|.|.|+. +|.    |..|+.
T Consensus       185 ~~~C~~~p--C~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~  222 (410)
T 3asi_A          185 STTCQEDS--CSNQGVCLQQWDGFSCDCSMTSFS----GPLCND  222 (410)
T ss_dssp             SSCCCTTS--SSTTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred             CCCccccc--CCCCCEecCCCCCceEeccCCccc----CCCCCC
Confidence            46787766  987 8999999999999996 998    888864

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=87.95  E-value=0.26  Score=42.70  Aligned_cols=35  Identities=31%  Similarity=0.818  Sum_probs=26.5

Q ss_pred             cccCCCCCCCCceEec-CCCCeEeecC-CCcEeCCCCCcee
Q psy11800        122 DECSQNGMCANGMCIN-MDGSFKCQCK-PGFVLSPTGHACI  160 (220)
Q Consensus       122 ~~C~~~~~c~~~~C~~-~~~~~~C~C~-~G~~~~~~g~~C~  160 (220)
                      ++|..+++.++|+|++ ..+.|.|.|+ +||    .|.+|+
T Consensus         2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~----~G~~Ce   38 (587)
T 3nt1_A            2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGF----YGENCT   38 (587)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSE----ETTTTC
T ss_pred             CCCCCCCCCCCCEeeCCCCCCeEEecCCCCc----cCCCCC
Confidence            5676555555689995 4478999999 999    777773

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=86.29  E-value=0.31  Score=34.19  Aligned_cols=20  Identities=45%  Similarity=1.280  Sum_probs=11.7

Q ss_pred             CCeeeeCCCceEeeCCCCCc
Q psy11800         64 NGRCDNTLGSYRCACQPGYS   83 (220)
Q Consensus        64 ~~~C~~~~g~~~C~C~~g~~   83 (220)
                      ++.|.+....|.|.|.+||.
T Consensus       130 ~g~C~~~~~~~~c~C~~g~~  149 (157)
T 1g1t_A          130 HGECVETINNYTCKCDPGFS  149 (157)
T ss_dssp             SEEEEEETTEEEEEECTTEE
T ss_pred             CCEeecCCCCeeEECCCCcc
Confidence            35565555556666666655

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=84.60  E-value=0.87  Score=31.86  Aligned_cols=41  Identities=32%  Similarity=0.891  Sum_probs=28.9

Q ss_pred             CCC-CeEecC--CCCe-EEeCCCCCccCCCCCCCC-cCC-CCCCCCCC-ceE
Q psy11800        172 CLN-GRCDNT--LGSY-RCACQPGYSPSPDGGFCV-DRD-ECRTPGGK-YTA  216 (220)
Q Consensus       172 C~~-~~C~~~--~~~~-~C~C~~G~~~~~~g~~C~-~~~-~C~~~~~~-~~~  216 (220)
                      |.| ++|+..  ...| .|.|++||.    |++|+ +++ +|....|. |.|
T Consensus        15 C~NGGtC~~~~~~s~~~~C~Cp~g~~----G~~Cei~~~~~C~~g~G~~YrG   62 (145)
T 2i9a_A           15 CLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCEIDKSKTCYEGNGHFYRG   62 (145)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEE----STTSCEESSCCEECTTCTTCCS
T ss_pred             CCCCCCcCCCccccCCccccCCCCCC----CCceeccccccCCCCCcccccc
Confidence            887 799775  2455 899999999    99996 333 57765432 444

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=83.29  E-value=1  Score=37.09  Aligned_cols=39  Identities=28%  Similarity=0.717  Sum_probs=30.4

Q ss_pred             CC-CCCccCCCCCCC-CCCeeeeCCCceEeeCCC-CCccCCCCCCccC
Q psy11800         49 DL-NVDECYENPLIC-LNGRCDNTLGSYRCACQP-GYSPSPDGGFCVD   93 (220)
Q Consensus        49 C~-~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~-g~~~~~~~~~C~~   93 (220)
                      |. ..+.|..+|  | +++.|++....|.|.|+. +|.    +..|+.
T Consensus       181 C~~~~~~C~~~p--C~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~  222 (410)
T 3asi_A          181 CEGPSTTCQEDS--CSNQGVCLQQWDGFSCDCSMTSFS----GPLCND  222 (410)
T ss_dssp             CCCCSSCCCTTS--SSTTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred             CCCCCCCccccc--CCCCCEecCCCCCceEeccCCccc----CCCCCC
Confidence            53 357788877  9 669999999999999996 887    556653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	220
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	1e-10
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	1e-09
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	1e-08
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	8e-10
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	6e-09
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	9e-08
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	6e-09
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	3e-08
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	2e-07
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	2e-08
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	1e-07
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	3e-06
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	5e-08
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	6e-07
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	9e-06
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	8e-08
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	6e-05
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	6e-05
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	2e-06
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	5e-05
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	2e-04
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	4e-06
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	4e-06
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	1e-05
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	5e-06
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	1e-04
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	1e-04
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	2e-05
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	1e-04
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	3e-05
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	7e-04
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	7e-04
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	4e-05
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	0.002
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	0.002
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	5e-05
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	5e-04
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	5e-05
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	3e-04
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	0.002
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	2e-04
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	2e-04
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	3e-04
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	3e-04
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	6e-04
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	6e-04
d1rfnb_	57	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	4e-04
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	4e-04
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	0.003
d1emoa2	39	g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sa	0.001
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	0.001
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	0.001
d1autl1	48	g.3.11.1 (L:49-96) Activated protein c (autoprothr	0.002
d1autl1	48	g.3.11.1 (L:49-96) Activated protein c (autoprothr	0.003
d2bz6l1	53	g.3.11.1 (L:90-142) Coagulation factor VIIa {Human	0.003
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	0.004
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	0.004

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (126), Expect = 1e-10
 Identities = 22/42 (52%), Positives = 28/42 (66%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV 202
           D+DEC  +PL+C  G C NT GSYRC C PG+  SP+   C+
Sbjct: 1   DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (120), Expect = 1e-09
 Identities = 21/41 (51%), Positives = 27/41 (65%)

Query: 52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV 92
          +DEC  +PL+C  G C NT GSYRC C PG+  SP+   C+
Sbjct: 2  IDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (113), Expect = 1e-08
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 122 DECSQ-NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACI 160
           DEC +   +C  G+C N +GS++C+C PG  LSP   ACI
Sbjct: 3   DECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (121), Expect = 8e-10
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC 201
           D+DEC E P +C  G+C NT GS++C C  GY  + D   C
Sbjct: 2   DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (115), Expect = 6e-09
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC 91
          +DEC E P +C  G+C NT GS++C C  GY  + D   C
Sbjct: 3  IDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (107), Expect = 9e-08
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 122 DECSQ-NGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC 159
           DEC +  G+C  G CIN  GSF+C+C  G+ L+     C
Sbjct: 4   DECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (115), Expect = 6e-09
 Identities = 17/40 (42%), Positives = 23/40 (57%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID 161
           +EC     C +G C+N  GS+ C C P F L+PT   C+D
Sbjct: 4   NECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (109), Expect = 3e-08
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
           DV+EC  +P  C++G C NT GSY C C P +  +P    CVD
Sbjct: 2   DVNEC-LDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (104), Expect = 2e-07
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 93
          V+EC  +P  C++G C NT GSY C C P +  +P    CVD
Sbjct: 3  VNEC-LDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (111), Expect = 2e-08
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPS-PDGGFCV 202
           D+DEC  +P +C  G+C NT G + C C  GY         C+
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (105), Expect = 1e-07
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPS-PDGGFCV 92
          +DEC  +P +C  G+C NT G + C C  GY         C+
Sbjct: 3  IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (95), Expect = 3e-06
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 122 DECSQN-GMCANGMCINMDGSFKCQCKPGFVLS-PTGHACI 160
           DEC  +  +C  G C+N  G F+C+C  G+         C+
Sbjct: 4   DECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (108), Expect = 5e-08
 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 3/46 (6%)

Query: 158 ACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
           + +D+DEC E   +C +G+C NT GSYRC C  GY     G  CVD
Sbjct: 1   SAVDMDECKEPD-VCKHGQCINTDGSYRCECPFGY--ILAGNECVD 43

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (101), Expect = 6e-07
 Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 2/40 (5%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID 161
           DEC +  +C +G CIN DGS++C+C  G++L   G+ C+D
Sbjct: 6   DECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVD 43

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 9e-06
 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 50 LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 93
          +++DEC E   +C +G+C NT GSYRC C  GY     G  CVD
Sbjct: 3  VDMDECKEPD-VCKHGQCINTDGSYRCECPFGY--ILAGNECVD 43

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (107), Expect = 8e-08
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDV 162
           DEC     C + +C+N++G +KCQC+ GF L P   AC  V
Sbjct: 2   DECQDPDTC-SQLCVNLEGGYKCQCEEGFQLDPHTKACKAV 41

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 6e-05
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 93
          +DEC ++P  C +  C N  G Y+C C+ G+   P    C  
Sbjct: 1  IDEC-QDPDTC-SQLCVNLEGGYKCQCEEGFQLDPHTKACKA 40

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 6e-05
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 162 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203
           +DEC ++P  C +  C N  G Y+C C+ G+   P    C  
Sbjct: 1   IDEC-QDPDTC-SQLCVNLEGGYKCQCEEGFQLDPHTKACKA 40

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 2e-06
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 7/49 (14%)

Query: 160 IDVDECYENPLICLNG-------RCDNTLGSYRCACQPGYSPSPDGGFC 201
           +D+DEC                  C N +G Y C+C+PGY    D   C
Sbjct: 2   VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 5e-05
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 7/47 (14%)

Query: 52 VDECYENPLICLNG-------RCDNTLGSYRCACQPGYSPSPDGGFC 91
          +DEC                  C N +G Y C+C+PGY    D   C
Sbjct: 4  LDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 2e-04
 Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 10/58 (17%)

Query: 102 DHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC 159
           D DEC+ +                        +C N  G + C C+PG+ L    H+C
Sbjct: 3   DLDECASRS----------KSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (94), Expect = 4e-06
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 52 VDECYENPLICL--NGRCDNTLGSYRCACQPGYSPSPDGGFCVDR 94
          +DEC   P      +  C N LG + C+C+ GY    +   C ++
Sbjct: 1  IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 45

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (94), Expect = 4e-06
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 162 VDECYENPLICL--NGRCDNTLGSYRCACQPGYSPSPDGGFCVDR 204
           +DEC   P      +  C N LG + C+C+ GY    +   C ++
Sbjct: 1   IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 45

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (92), Expect = 1e-05
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 122 DECSQNGMCANG---MCINMDGSFKCQCKPGFVLSPTGHACID 161
           DEC      A      C N  G F C C+ G+VL      C +
Sbjct: 2   DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.2 bits (94), Expect = 5e-06
 Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 1/39 (2%)

Query: 127 NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165
           NG C    C       +C C  G+VL     +C+  +  
Sbjct: 5   NGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.3 bits (84), Expect = 1e-04
 Identities = 9/31 (29%), Positives = 11/31 (35%)

Query: 67 CDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 97
          C       RC+C  GY    D   CV  +  
Sbjct: 12 CREERSEVRCSCAHGYVLGDDSKSCVSTERF 42

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.3 bits (84), Expect = 1e-04
 Identities = 9/31 (29%), Positives = 11/31 (35%)

Query: 177 CDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 207
           C       RC+C  GY    D   CV  +  
Sbjct: 12  CREERSEVRCSCAHGYVLGDDSKSCVSTERF 42

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (90), Expect = 2e-05
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 161 DVDECYENPLICLN-GRCDNTLGSYRCACQPGYS 193
           DVDEC      C + G+C NTLGS+ C C  GY+
Sbjct: 2   DVDECSLGANPCEHAGKCINTLGSFECQCLQGYT 35

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 52 VDECYENPLICLN-GRCDNTLGSYRCACQPGYS 83
          VDEC      C + G+C NTLGS+ C C  GY+
Sbjct: 3  VDECSLGANPCEHAGKCINTLGSFECQCLQGYT 35

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 3e-05
 Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)

Query: 127 NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165
           NG C    C     S  C C  G+ L+  G ACI     
Sbjct: 7   NGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPY 44

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 7e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 67 CDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 97
          C     S  C+C  GY+ + +G  C+     
Sbjct: 14 CHEEQNSVVCSCARGYTLADNGKACIPTGPY 44

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 7e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 177 CDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 207
           C     S  C+C  GY+ + +G  C+     
Sbjct: 14  CHEEQNSVVCSCARGYTLADNGKACIPTGPY 44

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 4e-05
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 127 NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165
           NG C +  C+   G  +C C PG+ L      C    + 
Sbjct: 6   NGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 67 CDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 97
          C   +G  RC+C PGY    D   C    + 
Sbjct: 13 CLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 177 CDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 207
           C   +G  RC+C PGY    D   C    + 
Sbjct: 13  CLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 5e-05
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 160 IDVDECYENPLICLN-GRCDNTLGSYRCACQPGYS 193
           +D D+C  NP  CLN G C + + SY C C  G+ 
Sbjct: 1   VDGDQCESNP--CLNGGSCKDDINSYECWCPFGFE 33

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 5e-04
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 50 LNVDECYENPLICLN-GRCDNTLGSYRCACQPGYS 83
          ++ D+C  NP  CLN G C + + SY C C  G+ 
Sbjct: 1  VDGDQCESNP--CLNGGSCKDDINSYECWCPFGFE 33

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 5e-05
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLS-PTGHAC 159
           DEC   G C +G+C N+ G+F+C C P   L+   G  C
Sbjct: 3   DECENGGFC-SGVCHNLPGTFECICGPDSALAGQIGTDC 40

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 3e-04
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGG 199
           D+DEC        +G C N  G++ C C P  + +   G
Sbjct: 1   DIDECENGG--FCSGVCHNLPGTFECICGPDSALAGQIG 37

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGG 89
          +DEC        +G C N  G++ C C P  + +   G
Sbjct: 2  IDECENGG--FCSGVCHNLPGTFECICGPDSALAGQIG 37

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.0 bits (83), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 52 VDECYENPLICL--NGRCDNTLGSYRCACQPGYSPSPDGGFC 91
          VDEC  +    +  +  C N LG Y C+C+ GY    +   C
Sbjct: 1  VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTC 42

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.0 bits (83), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 162 VDECYENPLICL--NGRCDNTLGSYRCACQPGYSPSPDGGFC 201
           VDEC  +    +  +  C N LG Y C+C+ GY    +   C
Sbjct: 1   VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTC 42

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.6 bits (82), Expect = 3e-04
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 3/44 (6%)

Query: 122 DECSQNGMCANG---MCINMDGSFKCQCKPGFVLSPTGHACIDV 162
           DEC  +   +      C N  G + C C+ G++L    H C  +
Sbjct: 2   DECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCSAL 45

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 3e-04
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 3/40 (7%)

Query: 122 DECSQ--NGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC 159
           +EC+   +  C++  C N  G + C C P + L      C
Sbjct: 1   NECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNC 39

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 6e-04
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 53 DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC 91
          +EC +   +  +  C+N +G Y C+C P Y    D   C
Sbjct: 1  NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 6e-04
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 163 DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC 201
           +EC +   +  +  C+N +G Y C+C P Y    D   C
Sbjct: 1   NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 4e-04
 Identities = 9/39 (23%), Positives = 13/39 (33%)

Query: 127 NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165
           NG C      + D    C C  G+ L+    +C      
Sbjct: 7   NGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF 45

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 34.7 bits (80), Expect = 4e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 161 DVDECYENPLICLNG-RCDNTLGSYRCACQPGYS 193
           D D+C  +P  C NG  C + L SY C C P + 
Sbjct: 1   DGDQCASSP--CQNGGSCKDQLQSYICFCLPAFE 32

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 32.4 bits (74), Expect = 0.003
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)

Query: 52 VDECYENPLICLNG-RCDNTLGSYRCACQPGYS 83
           D+C  +P  C NG  C + L SY C C P + 
Sbjct: 2  GDQCASSP--CQNGGSCKDQLQSYICFCLPAFE 32

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (76), Expect = 0.001
 Identities = 16/34 (47%), Positives = 19/34 (55%)

Query: 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPT 155
           DECS    C NG C N+ G F+C C+ GF   P 
Sbjct: 2   DECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPM 35

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 52 VDECYENPLICLNG-RCDNTLGSYRCACQPGYS 83
          V+EC  NP  C N   C + +G ++C C PGY 
Sbjct: 1  VNECVSNP--CQNDATCLDQIGEFQCICMPGYE 31

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 162 VDECYENPLICLNG-RCDNTLGSYRCACQPGYS 193
           V+EC  NP  C N   C + +G ++C C PGY 
Sbjct: 1   VNECVSNP--CQNDATCLDQIGEFQCICMPGYE 31

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYS 193
               C      C +G C + +GS+ C C+ G+ 
Sbjct: 7   LEHPCASLC--CGHGTCIDGIGSFSCDCRSGWE 37

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.5 bits (74), Expect = 0.003
 Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)

Query: 52 VDECYENPLICLNGRCDNTLGSYRCACQPGYS 83
             C      C +G C + +GS+ C C+ G+ 
Sbjct: 8  EHPCASLC--CGHGTCIDGIGSFSCDCRSGWE 37

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (75), Expect = 0.003
 Identities = 10/39 (25%), Positives = 14/39 (35%)

Query: 127 NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165
           NG C      +      C+C  G+ L   G +C    E 
Sbjct: 6   NGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (73), Expect = 0.004
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 53 DECYENPLICLN-GRCDNTLGSYRCACQPGYS 83
          D+C  +P  C N G+C + LG Y C C  G+ 
Sbjct: 1  DQCETSP--CQNQGKCKDGLGEYTCTCLEGFE 30

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (73), Expect = 0.004
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 163 DECYENPLICLN-GRCDNTLGSYRCACQPGYS 193
           D+C  +P  C N G+C + LG Y C C  G+ 
Sbjct: 1   DQCETSP--CQNQGKCKDGLGEYTCTCLEGFE 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	220
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.04
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.99
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.94
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.9
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.87
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.84
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.8
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.8
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.79
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.7
d1nt0a3	45	Mannose-binding protein associated serine protease	98.7
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.69
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.69
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.68
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.66
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.66
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.65
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.64
d1szba2	45	Mannose-binding protein associated serine protease	98.63
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.59
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.57
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.53
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.5
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.48
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.47
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.46
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.46
d1szba2	45	Mannose-binding protein associated serine protease	98.44
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.4
d1nt0a3	45	Mannose-binding protein associated serine protease	98.4
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.4
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.31
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.23
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	98.21
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.2
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	98.2
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.19
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.18
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.15
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	98.11
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.06
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.0
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.98
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.98
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.96
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.96
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.95
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.93
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.78
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	97.77
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.72
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	97.69
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.68
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.66
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	97.63
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.63
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	97.54
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.53
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.49
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.4
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.39
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.36
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	97.34
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	97.33
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.01
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	96.96
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.89
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.48
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	96.35
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.96
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	95.75
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	94.14
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	93.89
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	93.8
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	92.61
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	90.54
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	89.35
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	89.26
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	85.79

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.8e-11  Score=64.95  Aligned_cols=41  Identities=54%  Similarity=1.167  Sum_probs=37.1

Q ss_pred             ecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCC
Q psy11800        161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC  201 (220)
Q Consensus       161 ~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C  201 (220)
                      |||||+..+..|.++.|+|+.|+|.|.|++||.+..+++.|
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeECcCCCcc
Confidence            68999988888888899999999999999999988888776

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=5.5e-11  Score=65.06  Aligned_cols=43  Identities=44%  Similarity=0.968  Sum_probs=37.6

Q ss_pred             eecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        160 IDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       160 ~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      .|||||+..+..|.++.|+|++|+|.|.|++||.++.+++.|+
T Consensus         1 qDinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~Ce   43 (43)
T d1uzka2           1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD   43 (43)
T ss_dssp             EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred             CCcccccCCCCCcCCCEEECCCCCeEeECCCCCeECcCCCccC
Confidence            4799999877778767999999999999999999988887764

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.8e-10  Score=62.62  Aligned_cols=41  Identities=51%  Similarity=1.147  Sum_probs=36.2

Q ss_pred             CCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCc
Q psy11800         51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFC   91 (220)
Q Consensus        51 ~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C   91 (220)
                      |||||...+..|.++.|+|++|+|+|.|++||.+..+++.|
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeECcCCCcc
Confidence            58999988888877899999999999999999987776665

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=1.6e-10  Score=63.19  Aligned_cols=43  Identities=42%  Similarity=0.948  Sum_probs=37.0

Q ss_pred             CCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         50 LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        50 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      +|||||...+..|.++.|+|++|+|+|.|++||.+..+++.|+
T Consensus         1 qDinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~Ce   43 (43)
T d1uzka2           1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD   43 (43)
T ss_dssp             EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred             CCcccccCCCCCcCCCEEECCCCCeEeECCCCCeECcCCCccC
Confidence            4799999877777667999999999999999999887777763

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=5e-10  Score=61.17  Aligned_cols=42  Identities=38%  Similarity=0.851  Sum_probs=35.1

Q ss_pred             eecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccC-CCCCCC
Q psy11800        160 IDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPS-PDGGFC  201 (220)
Q Consensus       160 ~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~-~~g~~C  201 (220)
                      .|||||+..+..|.++.|+|+.|+|.|.|++||.+. .+++.|
T Consensus         1 TDidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~~~g~~C   43 (44)
T d1lmja1           1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC   43 (44)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSE
T ss_pred             CcccccCCCCCCCCCCEeEcCCCCeEEeCCCCCccCCCCCCcC
Confidence            379999988877877899999999999999999864 345554

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=7.2e-10  Score=60.62  Aligned_cols=43  Identities=42%  Similarity=0.849  Sum_probs=35.9

Q ss_pred             eecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        160 IDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       160 ~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      .+||||+.....| ++.|+|+.++|.|.|++||.+.++++.|.+
T Consensus         1 TDidEC~~~~~~c-~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1           1 TDVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVD   43 (43)
T ss_dssp             CCCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred             CCccccCCCCcCc-CCEeECCCCCEEEecCCCCEECCCCCcccC
Confidence            3799998765434 579999999999999999999988888754

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.9e-09  Score=58.84  Aligned_cols=42  Identities=36%  Similarity=0.826  Sum_probs=34.7

Q ss_pred             CCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccC-CCCCCc
Q psy11800         50 LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPS-PDGGFC   91 (220)
Q Consensus        50 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~-~~~~~C   91 (220)
                      +|||||...+..|.++.|+|++|+|.|.|++||.+. .+++.|
T Consensus         1 TDidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~~~g~~C   43 (44)
T d1lmja1           1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC   43 (44)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSE
T ss_pred             CcccccCCCCCCCCCCEeEcCCCCeEEeCCCCCccCCCCCCcC
Confidence            479999987777877899999999999999999874 244444

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.4e-09  Score=58.65  Aligned_cols=41  Identities=34%  Similarity=0.859  Sum_probs=35.1

Q ss_pred             cCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800        162 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       162 i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      ||||+. +..|.+ .|+|+.++|+|.|++||.+.++++.|++|
T Consensus         1 idEC~~-~~~C~~-~C~n~~Gsy~C~C~~Gy~L~~d~~~C~ai   41 (41)
T d1i0ua2           1 IDECQD-PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAV   41 (41)
T ss_dssp             CCTTTT-TTSCSS-CEECSSSCCEECCCTTEEECTTTCCEEEC
T ss_pred             CccCCC-CCCCCC-EeECCCCCEEeECCCCCeECCCCCccccC
Confidence            688974 446865 89999999999999999999999998764

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=3e-09  Score=57.74  Aligned_cols=39  Identities=49%  Similarity=0.992  Sum_probs=34.2

Q ss_pred             eecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        160 IDVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       160 ~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      .+||+|+..+.+|.+ ++|+++.++|.|.|++||+    |.+|+
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~----G~~Ce   40 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCE   40 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSC
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCc----CCCCc
Confidence            378999866667986 8999999999999999999    88886

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=5.6e-09  Score=59.76  Aligned_cols=43  Identities=35%  Similarity=0.763  Sum_probs=35.7

Q ss_pred             eecCcCCCCCCCCC-------CCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        160 IDVDECYENPLICL-------NGRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       160 ~~i~~C~~~~~~C~-------~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      +|||||+.....|.       ...|+|++|+|.|.|++||+|..+++.|+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            47899987665552       13799999999999999999999998885

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.70  E-value=3.1e-09  Score=58.57  Aligned_cols=41  Identities=37%  Similarity=0.717  Sum_probs=31.4

Q ss_pred             cCcCCCCCCC---CCCCeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        162 VDECYENPLI---CLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       162 i~~C~~~~~~---C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      ||||+.....   |. +.|+|+.++|+|.|++||.|..+++.|..
T Consensus         1 IdEC~~~~~~~~~C~-~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~~   44 (45)
T d1nt0a3           1 VDECRTSLGDSVPCD-HYCHNYLGGYYCSCRVGYILHQNKHTCSA   44 (45)
T ss_dssp             CCTTC-------CCS-SEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCccCCCCcCCCC-CEeecCCCCEEEeCCCCCEECCCCCcccc
Confidence            6788765433   43 49999999999999999999999998864

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=1e-08  Score=55.61  Aligned_cols=35  Identities=46%  Similarity=0.955  Sum_probs=29.8

Q ss_pred             CCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCcc
Q psy11800         50 LNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSP   84 (220)
Q Consensus        50 ~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~   84 (220)
                      +|||||...+.+| ++++|+++.++|.|.|++||++
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G   36 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTG   36 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEES
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCcC
Confidence            4789998554559 6699999999999999999983

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=9.1e-09  Score=54.66  Aligned_cols=37  Identities=46%  Similarity=1.117  Sum_probs=33.4

Q ss_pred             eecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        160 IDVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       160 ~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      +++|+|.++|  |.| ++|++..++|.|.|++||.    |++|+
T Consensus         1 id~d~C~~~P--C~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   38 (39)
T d1edmb_           1 VDGDQCESNP--CLNGGSCKDDINSYECWCPFGFE----GKNCE   38 (39)
T ss_dssp             CCCCTTTTCC--CCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred             CccccCCCCC--CCCCcEEEcCCCCEEEECCCCCC----CCCCC
Confidence            3689999887  987 8999999999999999999    88886

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=9.8e-09  Score=55.94  Aligned_cols=42  Identities=40%  Similarity=0.963  Sum_probs=34.7

Q ss_pred             cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceee
Q psy11800        120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID  161 (220)
Q Consensus       120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~  161 (220)
                      ++|||.....+.++.|+|++++|+|.|++||++.+.++.|+|
T Consensus         2 DidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1           2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD   43 (43)
T ss_dssp             CCCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred             CccccCCCCcCcCCEeECCCCCEEEecCCCCEECCCCCcccC
Confidence            467887655555679999999999999999999888888753

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.66  E-value=6.2e-09  Score=54.64  Aligned_cols=36  Identities=44%  Similarity=1.066  Sum_probs=32.5

Q ss_pred             ecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        161 DVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       161 ~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      |+|+|.++|  |.| ++|++..++|.|.|++||+    |++|+
T Consensus         1 D~d~C~~~P--C~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   37 (37)
T d2c4fl1           1 DGDQCASSP--CQNGGSCKDQLQSYICFCLPAFE----GRNCE   37 (37)
T ss_dssp             TCCGGGGCC--CCTTCEEEEETTEEEEECCTTEE----STTSC
T ss_pred             CcccCCCCC--CCCCCEEECCCCCeEEECCCCCc----CCCCC
Confidence            578999888  987 8999999999999999999    88875

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=3.2e-09  Score=57.79  Aligned_cols=42  Identities=48%  Similarity=0.899  Sum_probs=33.5

Q ss_pred             CCCCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         48 SDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        48 ~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      +|.|||||..++.. .++.|+|++|+|.|.|++||.+  ++..|+
T Consensus         1 sCvDidEC~~~~~~-~~~~C~Nt~Gsy~C~C~~Gy~~--~g~~C~   42 (43)
T d1emoa1           1 SAVDMDECKEPDVC-KHGQCINTDGSYRCECPFGYIL--AGNECV   42 (43)
T ss_dssp             CCCCCCSSSSTTSC-SSSCCCCCSSCCCCCCCTTEEE--SSSCEE
T ss_pred             CCcceeccCCcCCC-CCCEeECCCCCeEeECCCCccc--CCCccc
Confidence            48899999876533 4679999999999999999986  344553

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=1.3e-08  Score=53.92  Aligned_cols=35  Identities=46%  Similarity=1.211  Sum_probs=32.2

Q ss_pred             cCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        162 VDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       162 i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      ||+|.++|  |.| ++|++..++|.|.|++||.    |++|+
T Consensus         1 Id~C~~~P--C~n~g~C~~~~~~y~C~C~~G~~----G~~Ce   36 (39)
T d2vj3a2           1 VNECVSNP--CQNDATCLDQIGEFQCICMPGYE----GVHCE   36 (39)
T ss_dssp             CCTTTTCC--CCSSCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred             CcCCcCCC--CCCCCEEECCCCCEEEeCCCCCc----cCcCe
Confidence            68999887  997 8999999999999999999    99986

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.7e-08  Score=57.66  Aligned_cols=43  Identities=33%  Similarity=0.745  Sum_probs=35.2

Q ss_pred             CCCCccCCCCCCC-CC------CeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         50 LNVDECYENPLIC-LN------GRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        50 ~~i~~C~~~~~~C-~~------~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      +|||||...+..| ..      ..|+|++|+|+|.|++||.+..++++|+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            4789998766555 22      3799999999999999999988888875

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=8.1e-09  Score=56.84  Aligned_cols=42  Identities=31%  Similarity=0.760  Sum_probs=34.5

Q ss_pred             cCcCCCCCCCCC--CCeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        162 VDECYENPLICL--NGRCDNTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       162 i~~C~~~~~~C~--~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      ||||+.....+.  ...|+|+.++|.|.|++||.+..+++.|++
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCCCCccC
Confidence            688887654332  258999999999999999999999998865

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=3.6e-08  Score=52.95  Aligned_cols=41  Identities=44%  Similarity=1.115  Sum_probs=33.6

Q ss_pred             ccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeec
Q psy11800        121 HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDV  162 (220)
Q Consensus       121 ~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i  162 (220)
                      +|+|.....|.+ +|++++++|+|.|++||++.++++.|.+|
T Consensus         1 idEC~~~~~C~~-~C~n~~Gsy~C~C~~Gy~L~~d~~~C~ai   41 (41)
T d1i0ua2           1 IDECQDPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAV   41 (41)
T ss_dssp             CCTTTTTTSCSS-CEECSSSCCEECCCTTEEECTTTCCEEEC
T ss_pred             CccCCCCCCCCC-EeECCCCCEEeECCCCCeECCCCCccccC
Confidence            367765555644 89999999999999999999899988764

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=4.4e-08  Score=51.95  Aligned_cols=36  Identities=39%  Similarity=1.000  Sum_probs=31.2

Q ss_pred             CCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         51 NVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        51 ~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      |+|+|.++|  | ++++|++..++|.|.|++||+    |+.|+
T Consensus         2 d~d~C~~~P--C~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   38 (39)
T d1edmb_           2 DGDQCESNP--CLNGGSCKDDINSYECWCPFGFE----GKNCE   38 (39)
T ss_dssp             CCCTTTTCC--CCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred             ccccCCCCC--CCCCcEEEcCCCCEEEECCCCCC----CCCCC
Confidence            689999988  9 669999999999999999998    55553

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.53  E-value=3e-08  Score=51.91  Aligned_cols=32  Identities=38%  Similarity=0.981  Sum_probs=29.0

Q ss_pred             CCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCcc
Q psy11800         51 NVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSP   84 (220)
Q Consensus        51 ~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~   84 (220)
                      |+|+|.++|  | ++++|++..++|.|.|++||++
T Consensus         1 D~d~C~~~P--C~ngg~C~~~~~~y~C~C~~g~~G   33 (37)
T d2c4fl1           1 DGDQCASSP--CQNGGSCKDQLQSYICFCLPAFEG   33 (37)
T ss_dssp             TCCGGGGCC--CCTTCEEEEETTEEEEECCTTEES
T ss_pred             CcccCCCCC--CCCCCEEECCCCCeEEECCCCCcC
Confidence            589999988  9 6699999999999999999983

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=6e-08  Score=51.32  Aligned_cols=35  Identities=43%  Similarity=1.182  Sum_probs=30.3

Q ss_pred             CCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         52 VDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        52 i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      ||+|.++|  | ++++|++..++|+|.|++||.    |..|+
T Consensus         1 Id~C~~~P--C~n~g~C~~~~~~y~C~C~~G~~----G~~Ce   36 (39)
T d2vj3a2           1 VNECVSNP--CQNDATCLDQIGEFQCICMPGYE----GVHCE   36 (39)
T ss_dssp             CCTTTTCC--CCSSCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred             CcCCcCCC--CCCCCEEECCCCCEEEeCCCCCc----cCcCe
Confidence            68999988  9 568999999999999999998    55554

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.5e-08  Score=53.18  Aligned_cols=39  Identities=26%  Similarity=0.623  Sum_probs=33.0

Q ss_pred             cCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        162 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       162 i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      +|||+.+.+.|.+ .|+|++++|.|.|++||.|. +++.|+
T Consensus         2 ~neC~~~nggC~h-~C~n~~g~~~C~C~~Gy~L~-d~~tC~   40 (40)
T d3bpse1           2 TNECLDNNGGCSH-VCNDLKIGYECLCPDGFQLV-AQRRCE   40 (40)
T ss_dssp             SCGGGTGGGGCSS-EEEECSSSEEEECCTTCCEE-TTTEEC
T ss_pred             cccCCCCCCCCcC-EEEcCCCCEEEECCCCCEEC-CCCcCC
Confidence            5889887777876 99999999999999999985 666653

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=5.2e-08  Score=52.84  Aligned_cols=40  Identities=43%  Similarity=1.166  Sum_probs=31.0

Q ss_pred             ccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800        119 LYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACI  160 (220)
Q Consensus       119 ~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  160 (220)
                      +++|+|.....+.+++|+|++|+|.|.|++||++  .+..|+
T Consensus         3 vDidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~--~g~~C~   42 (43)
T d1emoa1           3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECV   42 (43)
T ss_dssp             CCCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEE--SSSCEE
T ss_pred             cceeccCCcCCCCCCEeECCCCCeEeECCCCccc--CCCccc
Confidence            3557776555555679999999999999999987  455664

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=5.8e-08  Score=52.24  Aligned_cols=39  Identities=33%  Similarity=0.762  Sum_probs=32.7

Q ss_pred             CcCCC-CCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        163 DECYE-NPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       163 ~~C~~-~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      |||+. ..+.|.+ .|+|+.++|+|.|++||.|..+++.|.
T Consensus         1 dEC~~~~~~~C~~-~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCCCC-EeecCCCCEEEeCCCCCEECCCCCeec
Confidence            57764 3345865 999999999999999999999999885

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=8.6e-08  Score=49.49  Aligned_cols=34  Identities=41%  Similarity=1.247  Sum_probs=30.3

Q ss_pred             CcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        163 DECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       163 ~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      |+|.++|  |.| |+|++..++|.|.|++||.    |++|+
T Consensus         1 d~C~~~P--C~ngg~C~~~~~~y~C~C~~g~~----G~~CE   35 (35)
T d2vj3a3           1 DECASSP--CLHNGRCLDKINEFQCECPTGFT----GHLCQ   35 (35)
T ss_dssp             CTTTTCC--STTTCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred             CCCCCCC--CCCCcEEECCCCCeEEECCCCCC----CCCcC
Confidence            5788877  987 8999999999999999999    88875

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=7e-08  Score=52.95  Aligned_cols=42  Identities=31%  Similarity=0.767  Sum_probs=33.8

Q ss_pred             CCccCCCCCCC--CCCeeeeCCCceEeeCCCCCccCCCCCCccC
Q psy11800         52 VDECYENPLIC--LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        52 i~~C~~~~~~C--~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      ||||+..+..+  -...|+|++|+|+|.|+.||.+..++++|.+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCCCCccC
Confidence            67888665422  2359999999999999999999988888864

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=9.6e-08  Score=50.51  Aligned_cols=34  Identities=44%  Similarity=1.209  Sum_probs=30.9

Q ss_pred             CcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        163 DECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       163 ~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      |+|.++|  |.| |+|++..++|.|.|++||.    |++|+
T Consensus         1 D~C~~~P--C~ngg~C~~~~~~y~C~C~~G~~----G~~Ce   35 (39)
T d1xkba1           1 DQCETSP--CQNQGKCKDGLGEYTCTCLEGFE----GKNCE   35 (39)
T ss_dssp             CTTTTCC--CCSSCEECCCSSSCCEECCTTEE----TTTTC
T ss_pred             CcCCCCC--CCCCcEEECCCCCEEEECCCCCC----cCcCe
Confidence            5788877  987 8999999999999999999    99997

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.40  E-value=7.4e-08  Score=52.85  Aligned_cols=41  Identities=37%  Similarity=0.717  Sum_probs=30.7

Q ss_pred             CCccCCCCCC---CCCCeeeeCCCceEeeCCCCCccCCCCCCccC
Q psy11800         52 VDECYENPLI---CLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        52 i~~C~~~~~~---C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      ||||+..+..   |. ..|++++++|+|.|++||.+..++++|..
T Consensus         1 IdEC~~~~~~~~~C~-~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~~   44 (45)
T d1nt0a3           1 VDECRTSLGDSVPCD-HYCHNYLGGYYCSCRVGYILHQNKHTCSA   44 (45)
T ss_dssp             CCTTC-------CCS-SEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCccCCCCcCCCC-CEeecCCCCEEEeCCCCCEECCCCCcccc
Confidence            5788765433   43 59999999999999999999888888753

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=3.3e-08  Score=52.39  Aligned_cols=33  Identities=33%  Similarity=0.840  Sum_probs=28.0

Q ss_pred             ecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccC
Q psy11800        161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPS  195 (220)
Q Consensus       161 ~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~  195 (220)
                      |||||+.. +.|.+ .|+|+.++|+|.|++||.++
T Consensus         1 DidEC~~~-~~C~~-~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECENG-GFCSG-VCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             ECCHHHHC-SSCSS-EEEECSSSEEEEECSSSSCE
T ss_pred             CccccCCC-cCccC-EeeCCCCCeEeECCCCCeeC
Confidence            68899754 46864 99999999999999999975

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=3.3e-07  Score=47.23  Aligned_cols=30  Identities=40%  Similarity=1.169  Sum_probs=26.6

Q ss_pred             CccCCCCCCC-CCCeeeeCCCceEeeCCCCCcc
Q psy11800         53 DECYENPLIC-LNGRCDNTLGSYRCACQPGYSP   84 (220)
Q Consensus        53 ~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~   84 (220)
                      |+|.++|  | ++++|++..++|.|.|++||.+
T Consensus         1 d~C~~~P--C~ngg~C~~~~~~y~C~C~~g~~G   31 (35)
T d2vj3a3           1 DECASSP--CLHNGRCLDKINEFQCECPTGFTG   31 (35)
T ss_dssp             CTTTTCC--STTTCEEEECSSCEEEECCTTEES
T ss_pred             CCCCCCC--CCCCcEEECCCCCeEEECCCCCCC
Confidence            5788888  9 6699999999999999999983

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=3.6e-07  Score=48.22  Aligned_cols=34  Identities=41%  Similarity=1.165  Sum_probs=29.0

Q ss_pred             CccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         53 DECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        53 ~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      |+|.++|  | ++++|++..++|.|.|++||+    |..|+
T Consensus         1 D~C~~~P--C~ngg~C~~~~~~y~C~C~~G~~----G~~Ce   35 (39)
T d1xkba1           1 DQCETSP--CQNQGKCKDGLGEYTCTCLEGFE----GKNCE   35 (39)
T ss_dssp             CTTTTCC--CCSSCEECCCSSSCCEECCTTEE----TTTTC
T ss_pred             CcCCCCC--CCCCcEEECCCCCEEEECCCCCC----cCcCe
Confidence            5788888  9 669999999999999999998    55664

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.21  E-value=1.7e-07  Score=52.75  Aligned_cols=42  Identities=24%  Similarity=0.462  Sum_probs=35.7

Q ss_pred             CCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCC
Q psy11800        166 YENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR  208 (220)
Q Consensus       166 ~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~  208 (220)
                      +.+.+.|.+ .|+++.++|+|.|++||.|+.|++.|++++++.
T Consensus         2 ~~~NGgC~h-~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~p   43 (51)
T d1kigl_           2 SLDNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             CTTTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred             CCCCCCccc-EeEcCCCcEEeEcCCCCEECCCCCccccCCccC
Confidence            344445765 799999999999999999999999999998874

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=2.4e-07  Score=49.25  Aligned_cols=37  Identities=35%  Similarity=0.918  Sum_probs=31.6

Q ss_pred             CcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCcCC
Q psy11800        163 DECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDRD  205 (220)
Q Consensus       163 ~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~  205 (220)
                      +.|.++|  |.| |+|++..++|.|.|++||.    |.+|+.+.
T Consensus         2 ~~C~~~p--C~ngg~C~~~~~~y~C~C~~g~~----G~~Ce~~~   39 (40)
T d1g1sa2           2 ASCQDMS--CSKQGECLETIGNYTCSCYPGFY----GPECEYVR   39 (40)
T ss_dssp             CCCCTTG--GGGSEEEEECSSSEEEEECTTEE----STTSCEEC
T ss_pred             CcccCCc--CCCCcEEECCCCCeEEeCCCCcc----CCCCCCCc
Confidence            4577776  986 8999999999999999999    99998653

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=6.5e-07  Score=49.98  Aligned_cols=42  Identities=29%  Similarity=0.536  Sum_probs=34.7

Q ss_pred             CCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCC
Q psy11800        165 CYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC  207 (220)
Q Consensus       165 C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C  207 (220)
                      |+.+.+.|.+ .|+++.++|+|.|+.||.|+.|+++|+.+++.
T Consensus         2 C~~~NGgC~~-~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~~   43 (50)
T d1autl2           2 CSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF   43 (50)
T ss_dssp             SSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEECSSS
T ss_pred             CCCCCCCccc-EeecCCCCeEEECCCCCEECCCCCccccCCCC
Confidence            4444445765 89999999999999999999999999877764

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.2e-07  Score=48.72  Aligned_cols=39  Identities=26%  Similarity=0.623  Sum_probs=32.4

Q ss_pred             CCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        52 i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      +|||..+++.|.+ .|++++++|+|.|++||.+. ++++|+
T Consensus         2 ~neC~~~nggC~h-~C~n~~g~~~C~C~~Gy~L~-d~~tC~   40 (40)
T d3bpse1           2 TNECLDNNGGCSH-VCNDLKIGYECLCPDGFQLV-AQRRCE   40 (40)
T ss_dssp             SCGGGTGGGGCSS-EEEECSSSEEEECCTTCCEE-TTTEEC
T ss_pred             cccCCCCCCCCcC-EEEcCCCCEEEECCCCCEEC-CCCcCC
Confidence            5889887777864 99999999999999999985 666653

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4.1e-07  Score=50.21  Aligned_cols=36  Identities=33%  Similarity=0.884  Sum_probs=32.4

Q ss_pred             ecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        161 DVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       161 ~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      ..++|.+++  |.||+|++..++|.|.|++||.    |++|+
T Consensus         7 ~~~~C~~~P--C~nG~C~~~~~~y~C~C~~G~~----G~~Ce   42 (48)
T d1autl1           7 LEHPCASLC--CGHGTCIDGIGSFSCDCRSGWE----GRFCQ   42 (48)
T ss_dssp             SCCSSSSTT--TTSEEECCCSSCCCEEECTTEE----STTSC
T ss_pred             CCCcccCCC--CCCCEEECCCCCCeEeCCCCCc----CCCcc
Confidence            357898887  9889999999999999999999    99996

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1.2e-06  Score=46.87  Aligned_cols=39  Identities=33%  Similarity=0.762  Sum_probs=31.5

Q ss_pred             CccCC-CCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         53 DECYE-NPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        53 ~~C~~-~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      |||.. ....|.+ .|++++++|+|.|+.||.+..++++|.
T Consensus         1 dEC~~~~~~~C~~-~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCCCC-EeecCCCCEEEeCCCCCEECCCCCeec
Confidence            46763 2345754 999999999999999999988888875

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=4.5e-07  Score=50.88  Aligned_cols=42  Identities=24%  Similarity=0.562  Sum_probs=34.6

Q ss_pred             CCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCC
Q psy11800        165 CYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC  207 (220)
Q Consensus       165 C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C  207 (220)
                      |..+.+.|.+ .|++++++|.|.|++||.|+.|++.|+++++.
T Consensus         3 C~~~NGgC~h-~C~n~~g~~~C~C~~Gy~L~~D~~tC~~~~~~   44 (51)
T d2p3ua1           3 CSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPY   44 (51)
T ss_dssp             GGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSS
T ss_pred             cCCCCCCccc-EeecCCCCeEeEcCCCCEECCCCCccccCCcc
Confidence            3333445765 89999999999999999999999999887765

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=5.1e-07  Score=47.69  Aligned_cols=35  Identities=37%  Similarity=1.009  Sum_probs=30.5

Q ss_pred             CcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        163 DECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       163 ~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      +.|.++|  |.| |+|++..++|.|.|++||.    |++|+.
T Consensus         2 ~~C~~~p--C~ngg~C~~~~~~~~C~C~~g~~----G~~Ce~   37 (39)
T d1g1ta2           2 AACTNTS--CSGHGECVETINNYTCKCDPGFS----GLKCEQ   37 (39)
T ss_dssp             CCCCTTG--GGGSEEEEEETTEEEEEECTTEE----STTSCE
T ss_pred             CcccCCc--CCCCcEEECCCCCEEEeCCCCCc----CcCcCc
Confidence            4677776  986 8999999999999999999    999974

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1e-06  Score=46.72  Aligned_cols=35  Identities=37%  Similarity=0.991  Sum_probs=29.4

Q ss_pred             CccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC
Q psy11800         53 DECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        53 ~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      +.|.++|  | ++++|++..++|+|.|++||.    |..|+.
T Consensus         2 ~~C~~~p--C~ngg~C~~~~~~y~C~C~~g~~----G~~Ce~   37 (40)
T d1g1sa2           2 ASCQDMS--CSKQGECLETIGNYTCSCYPGFY----GPECEY   37 (40)
T ss_dssp             CCCCTTG--GGGSEEEEECSSSEEEEECTTEE----STTSCE
T ss_pred             CcccCCc--CCCCcEEECCCCCeEEeCCCCcc----CCCCCC
Confidence            4678777  9 669999999999999999998    566654

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.5e-06  Score=47.84  Aligned_cols=35  Identities=34%  Similarity=0.947  Sum_probs=30.2

Q ss_pred             CCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        52 i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      .++|.++|  |.||+|++..++|+|.|++||.    |..|+
T Consensus         8 ~~~C~~~P--C~nG~C~~~~~~y~C~C~~G~~----G~~Ce   42 (48)
T d1autl1           8 EHPCASLC--CGHGTCIDGIGSFSCDCRSGWE----GRFCQ   42 (48)
T ss_dssp             CCSSSSTT--TTSEEECCCSSCCCEEECTTEE----STTSC
T ss_pred             CCcccCCC--CCCCEEECCCCCCeEeCCCCCc----CCCcc
Confidence            57899888  9779999999999999999998    55664

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.98  E-value=2.2e-06  Score=45.91  Aligned_cols=36  Identities=42%  Similarity=0.980  Sum_probs=30.6

Q ss_pred             ecCcCCCCCCCCCC-CeEecC-CCCeEEeCCC-CCccCCCCCCCC
Q psy11800        161 DVDECYENPLICLN-GRCDNT-LGSYRCACQP-GYSPSPDGGFCV  202 (220)
Q Consensus       161 ~i~~C~~~~~~C~~-~~C~~~-~~~~~C~C~~-G~~~~~~g~~C~  202 (220)
                      .||+|.+++  |.| |+|++. .++|.|.|+. ||.    |.+|+
T Consensus         1 Pid~C~~nP--C~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   39 (42)
T d1q4ga2           1 PVNPCCYYP--CQHQGICVRFGLDRYQCDCTRTGYS----GPNCT   39 (42)
T ss_dssp             CCCGGGGCC--CCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred             CCccCcCCC--CCCCCEeeeCCCCCEEEECCCCCcC----CcCcC
Confidence            378899888  997 899875 6789999986 899    99987

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=6.4e-07  Score=47.28  Aligned_cols=32  Identities=44%  Similarity=1.139  Sum_probs=25.6

Q ss_pred             ccccCCCCCCCCceEecCCCCeEeecCCCcEeC
Q psy11800        121 HDECSQNGMCANGMCINMDGSFKCQCKPGFVLS  153 (220)
Q Consensus       121 ~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~  153 (220)
                      +|+|.....|. ..|+|++|+|+|.|++||++.
T Consensus         2 idEC~~~~~C~-~~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           2 IDECENGGFCS-GVCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             CCHHHHCSSCS-SEEEECSSSEEEEECSSSSCE
T ss_pred             ccccCCCcCcc-CEeeCCCCCeEeECCCCCeeC
Confidence            56776555564 489999999999999999663

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=6.5e-06  Score=43.78  Aligned_cols=32  Identities=34%  Similarity=1.061  Sum_probs=26.3

Q ss_pred             CCCCCCCCCC-CeEecC--CCCeEEeCCCCCccCCCCCCCC
Q psy11800        165 CYENPLICLN-GRCDNT--LGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       165 C~~~~~~C~~-~~C~~~--~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      |.++|  |.| |+|++.  ..+|.|.|++||.    |.+|+
T Consensus         1 C~~nP--C~ngG~C~~~~~~~~y~C~C~~g~~----G~~Ce   35 (41)
T d1tpga1           1 CSEPR--CFNGGTCQQALYFSDFVCQCPEGFA----GKSCE   35 (41)
T ss_dssp             CSSCC--SCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred             CcCCC--CCCCCEEecCCCCCCeEECCCCCCC----CCCcC
Confidence            45555  987 899875  4679999999999    99997

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=1.5e-06  Score=45.80  Aligned_cols=34  Identities=38%  Similarity=1.015  Sum_probs=28.7

Q ss_pred             CccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         53 DECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        53 ~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      +.|.++|  | ++++|++..++|.|.|++||.    |..|+
T Consensus         2 ~~C~~~p--C~ngg~C~~~~~~~~C~C~~g~~----G~~Ce   36 (39)
T d1g1ta2           2 AACTNTS--CSGHGECVETINNYTCKCDPGFS----GLKCE   36 (39)
T ss_dssp             CCCCTTG--GGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred             CcccCCc--CCCCcEEECCCCCEEEeCCCCCc----CcCcC
Confidence            4688777  9 669999999999999999998    55664

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=3.3e-07  Score=48.56  Aligned_cols=31  Identities=26%  Similarity=0.748  Sum_probs=25.7

Q ss_pred             CCCC-CCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        170 LICL-NGRCDNTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       170 ~~C~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      +.|+ ++.|+|++++|.|.|++||.  .+|..|.
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~--GdG~~C~   38 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYT--GNGRQCV   38 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEE--ECSSSEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCc--CCCCEee
Confidence            4576 58999999999999999998  4577764

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.78  E-value=8.6e-06  Score=43.52  Aligned_cols=35  Identities=43%  Similarity=1.007  Sum_probs=28.2

Q ss_pred             CCccCCCCCCC-CCCeeeeC-CCceEeeCCC-CCccCCCCCCcc
Q psy11800         52 VDECYENPLIC-LNGRCDNT-LGSYRCACQP-GYSPSPDGGFCV   92 (220)
Q Consensus        52 i~~C~~~~~~C-~~~~C~~~-~g~~~C~C~~-g~~~~~~~~~C~   92 (220)
                      ||+|.++|  | ++++|++. .++|.|.|+. ||.    |..|+
T Consensus         2 id~C~~nP--C~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   39 (42)
T d1q4ga2           2 VNPCCYYP--CQHQGICVRFGLDRYQCDCTRTGYS----GPNCT   39 (42)
T ss_dssp             CCGGGGCC--CCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred             CccCcCCC--CCCCCEeeeCCCCCEEEECCCCCcC----CcCcC
Confidence            68899988  9 56999975 5789999986 898    55554

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1e-05  Score=44.93  Aligned_cols=39  Identities=21%  Similarity=0.346  Sum_probs=30.6

Q ss_pred             CcCCCCCCCCCCCeEe------cCCCCeEEeCCCCCccCCCCCCCC
Q psy11800        163 DECYENPLICLNGRCD------NTLGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       163 ~~C~~~~~~C~~~~C~------~~~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      ++|..+.+.|.+ .|+      ++.++|.|.|+.||.|..|++.|.
T Consensus         5 neC~~~NGGC~h-~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           5 ERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             SSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             cccCCCCCCCcC-ccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            566665556766 886      455799999999999999999874

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=8e-06  Score=46.64  Aligned_cols=42  Identities=21%  Similarity=0.459  Sum_probs=33.5

Q ss_pred             CCCCCCCCCCCeEecCC-CCeEEeCCCCCccCCCCCCCCcCCCC
Q psy11800        165 CYENPLICLNGRCDNTL-GSYRCACQPGYSPSPDGGFCVDRDEC  207 (220)
Q Consensus       165 C~~~~~~C~~~~C~~~~-~~~~C~C~~G~~~~~~g~~C~~~~~C  207 (220)
                      |..+.+.|.+ .|+++. ++|.|.|++||.|+.|++.|+++++.
T Consensus         3 C~~~NGgC~h-~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~f   45 (57)
T d1rfnb_           3 CNIKNGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF   45 (57)
T ss_dssp             TTGGGGGCSS-EEEECTTSCEEEECCTTEEECTTSSSEEECSSS
T ss_pred             cCCCCCCccc-EeeeCCCCCeEeECCCCCEECCCCCccccCCCc
Confidence            4444445765 899986 48999999999999999999887764

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1e-05  Score=44.94  Aligned_cols=41  Identities=29%  Similarity=0.535  Sum_probs=32.6

Q ss_pred             cCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCc
Q psy11800         55 CYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDE   96 (220)
Q Consensus        55 C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~   96 (220)
                      |..+.+.|. ..|++++++|+|.|+.||.+..++++|....+
T Consensus         2 C~~~NGgC~-~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~   42 (50)
T d1autl2           2 CSLDNGGCT-HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK   42 (50)
T ss_dssp             SSSGGGGCS-SEEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred             CCCCCCCcc-cEeecCCCCeEEECCCCCEECCCCCccccCCC
Confidence            333344565 38999999999999999999999999986643

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=2.1e-06  Score=45.34  Aligned_cols=30  Identities=27%  Similarity=0.837  Sum_probs=24.9

Q ss_pred             CC-CCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800         61 IC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        61 ~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      .| .++.|++++++|.|.|.+||.+  ++..|.
T Consensus         8 ~C~~~A~C~Nt~Gsy~C~C~~Gy~G--dG~~C~   38 (40)
T d1gl4a2           8 QCSVHAECRDYATGFCCRCVANYTG--NGRQCV   38 (40)
T ss_dssp             GSCTTEEEEECSSCEEEEECTTEEE--CSSSEE
T ss_pred             CCCCCCEeecCCCCeEeECCCCCcC--CCCEee
Confidence            36 6789999999999999999997  466553

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.66  E-value=1.9e-05  Score=41.91  Aligned_cols=34  Identities=41%  Similarity=1.141  Sum_probs=28.7

Q ss_pred             CcCCCCCCCCCC-CeEecC-CCCeEEeCC-CCCccCCCCCCCC
Q psy11800        163 DECYENPLICLN-GRCDNT-LGSYRCACQ-PGYSPSPDGGFCV  202 (220)
Q Consensus       163 ~~C~~~~~~C~~-~~C~~~-~~~~~C~C~-~G~~~~~~g~~C~  202 (220)
                      |+|.+++  |.| |+|++. .++|.|.|+ +||.    |.+|+
T Consensus         2 d~C~~~P--C~ngG~C~~~~~~~y~C~C~~~gy~----G~~Ce   38 (41)
T d1cvua2           2 NPCCSNP--CQNRGECMSTGFDQYKCDCTRTGFY----GENCT   38 (41)
T ss_dssp             CTTTTCC--CCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred             CcCcCCC--CCCCCEEEECCCCCEEEeCcCCCcC----CcCcC
Confidence            6788777  997 899875 578999996 6999    99987

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.63  E-value=8.9e-06  Score=45.44  Aligned_cols=41  Identities=24%  Similarity=0.481  Sum_probs=33.1

Q ss_pred             CCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcc
Q psy11800         56 YENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC   97 (220)
Q Consensus        56 ~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C   97 (220)
                      ..+.+.|.+ .|+++.++|+|.|+.||.+..++++|..++++
T Consensus         2 ~~~NGgC~h-~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~   42 (51)
T d1kigl_           2 SLDNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             CTTTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCCCCCccc-EeEcCCCcEEeEcCCCCEECCCCCccccCCcc
Confidence            334455743 78999999999999999999999999877554

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.7e-05  Score=46.48  Aligned_cols=45  Identities=29%  Similarity=0.660  Sum_probs=33.7

Q ss_pred             eecCcCCCCCCCCCC-CeEe-----cCCCCeEEeCCCCCccCCCCCCCCc-CCCCCCC
Q psy11800        160 IDVDECYENPLICLN-GRCD-----NTLGSYRCACQPGYSPSPDGGFCVD-RDECRTP  210 (220)
Q Consensus       160 ~~i~~C~~~~~~C~~-~~C~-----~~~~~~~C~C~~G~~~~~~g~~C~~-~~~C~~~  210 (220)
                      ++.++|..++  |.| |+|.     +..++|.|.|++||.    |+.|+. +..+...
T Consensus         4 ~~c~ec~~~~--C~NgG~C~~~~~~~~~~~y~C~C~~gy~----G~~Ce~~~~~~~~~   55 (63)
T d1haea_           4 VKCAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMKVQN   55 (63)
T ss_dssp             EECCHHHHTT--SCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCEECCSSCTT
T ss_pred             ccCCCCcCCc--CCCCCEEeecccccCCCCEEeECCCCCC----CCCcCCCCCccccC
Confidence            3457777776  988 8995     456789999999999    999974 4444433

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=1.3e-05  Score=44.63  Aligned_cols=41  Identities=24%  Similarity=0.579  Sum_probs=32.7

Q ss_pred             cCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCc
Q psy11800         55 CYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDE   96 (220)
Q Consensus        55 C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~   96 (220)
                      |..+.+.|.+ .|++++++|+|.|+.||.+..|+++|....+
T Consensus         3 C~~~NGgC~h-~C~n~~g~~~C~C~~Gy~L~~D~~tC~~~~~   43 (51)
T d2p3ua1           3 CSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGP   43 (51)
T ss_dssp             GGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred             cCCCCCCccc-EeecCCCCeEeEcCCCCEECCCCCccccCCc
Confidence            3334455753 8999999999999999999999999987643

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=4.3e-05  Score=40.45  Aligned_cols=34  Identities=38%  Similarity=1.093  Sum_probs=26.9

Q ss_pred             CccCCCCCCC-CCCeeeeC-CCceEeeCC-CCCccCCCCCCcc
Q psy11800         53 DECYENPLIC-LNGRCDNT-LGSYRCACQ-PGYSPSPDGGFCV   92 (220)
Q Consensus        53 ~~C~~~~~~C-~~~~C~~~-~g~~~C~C~-~g~~~~~~~~~C~   92 (220)
                      |+|.++|  | ++++|++. .++|+|.|+ +||.    |..|+
T Consensus         2 d~C~~~P--C~ngG~C~~~~~~~y~C~C~~~gy~----G~~Ce   38 (41)
T d1cvua2           2 NPCCSNP--CQNRGECMSTGFDQYKCDCTRTGFY----GENCT   38 (41)
T ss_dssp             CTTTTCC--CCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred             CcCcCCC--CCCCCEEEECCCCCEEEeCcCCCcC----CcCcC
Confidence            6788888  9 56999975 578999997 5998    55554

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=5.8e-05  Score=37.55  Aligned_cols=31  Identities=42%  Similarity=1.134  Sum_probs=26.6

Q ss_pred             CcCCCCCCCCCCCeEecCCCCeEEeCCCCCcc
Q psy11800        163 DECYENPLICLNGRCDNTLGSYRCACQPGYSP  194 (220)
Q Consensus       163 ~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~  194 (220)
                      |+|+.+. +|.|++|.|..++|.|.|..||..
T Consensus         2 dECsign-pCGnGTCtNviGgFec~C~~GFep   32 (39)
T d1emoa2           2 DECSVGN-PCGNGTCKNVIGGFECTCEEGFEP   32 (39)
T ss_dssp             CGGGTTC-SSSSSCEEECSSSEEECCSSSSCC
T ss_pred             CccccCC-ccCCceeeecccceEEeecCCcCC
Confidence            6777653 698999999999999999999974

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=0.0001  Score=38.90  Aligned_cols=32  Identities=34%  Similarity=0.995  Sum_probs=24.5

Q ss_pred             cCCCCCCC-CCCeeeeCC--CceEeeCCCCCccCCCCCCcc
Q psy11800         55 CYENPLIC-LNGRCDNTL--GSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        55 C~~~~~~C-~~~~C~~~~--g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      |.++|  | +.++|++..  ..|+|.|++||.    |..|+
T Consensus         1 C~~nP--C~ngG~C~~~~~~~~y~C~C~~g~~----G~~Ce   35 (41)
T d1tpga1           1 CSEPR--CFNGGTCQQALYFSDFVCQCPEGFA----GKSCE   35 (41)
T ss_dssp             CSSCC--SCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred             CcCCC--CCCCCEEecCCCCCCeEECCCCCCC----CCCcC
Confidence            45666  8 559999763  579999999998    56665

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=7.4e-05  Score=37.16  Aligned_cols=30  Identities=50%  Similarity=1.135  Sum_probs=27.0

Q ss_pred             cccCCCCCCCCceEecCCCCeEeecCCCcE
Q psy11800        122 DECSQNGMCANGMCINMDGSFKCQCKPGFV  151 (220)
Q Consensus       122 ~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~  151 (220)
                      |+|...+.|.+++|.|..++|.|.|..||.
T Consensus         2 dECsignpCGnGTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           2 DECSVGNPCGNGTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CGGGTTCSSSSSCEEECSSSEEECCSSSSC
T ss_pred             CccccCCccCCceeeecccceEEeecCCcC
Confidence            577777888999999999999999999994

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=0.00019  Score=40.14  Aligned_cols=35  Identities=49%  Similarity=1.051  Sum_probs=27.2

Q ss_pred             cCCCCCCCCCC-CeEec--CCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800        164 ECYENPLICLN-GRCDN--TLGSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       164 ~C~~~~~~C~~-~~C~~--~~~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      +|..++  |.| |+|+.  ....|.|.|++||.    |..|+..
T Consensus         8 ~c~~~~--C~NgG~C~~~~~~~~~~C~C~~gy~----G~~Ce~~   45 (53)
T d3egfa_           8 SSYDGY--CLNGGVCMHIESLDSYTCNCVIGYS----GDRCQTR   45 (53)
T ss_dssp             TTSSCC--SCSSCEEEEESSSSCEEEECCTTCC----SSSSCCC
T ss_pred             CCCCCC--CCCCcEeeccCCCCCeEeECCCCCc----CCCCccC
Confidence            455554  987 89975  44689999999999    9999754

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=4.7e-05  Score=42.63  Aligned_cols=41  Identities=32%  Similarity=0.646  Sum_probs=31.3

Q ss_pred             CCCCCCCCCCCeEecCCC-CeEEeCCCCCccCCCCCCCCcCCC
Q psy11800        165 CYENPLICLNGRCDNTLG-SYRCACQPGYSPSPDGGFCVDRDE  206 (220)
Q Consensus       165 C~~~~~~C~~~~C~~~~~-~~~C~C~~G~~~~~~g~~C~~~~~  206 (220)
                      |+.+.+.|.+ .|+++.+ +|.|.|+.||.|+.|+++|....+
T Consensus         2 C~~~NGGC~h-~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~   43 (53)
T d2bz6l1           2 CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE   43 (53)
T ss_dssp             TTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred             CCCCCCCCcC-EeeeCCCCCEEeECCCCCEECCCCCcccCCCc
Confidence            3333344765 8998876 589999999999999999975543

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=9.1e-05  Score=40.92  Aligned_cols=39  Identities=21%  Similarity=0.346  Sum_probs=29.8

Q ss_pred             CccCCCCCCCCCCeeee------CCCceEeeCCCCCccCCCCCCcc
Q psy11800         53 DECYENPLICLNGRCDN------TLGSYRCACQPGYSPSPDGGFCV   92 (220)
Q Consensus        53 ~~C~~~~~~C~~~~C~~------~~g~~~C~C~~g~~~~~~~~~C~   92 (220)
                      ++|..+.+.|.+ .|+.      +.++|+|.|+.||.+..++++|.
T Consensus         5 neC~~~NGGC~h-~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           5 ERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             SSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             cccCCCCCCCcC-ccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            466666666754 8863      45789999999999998888874

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.0002  Score=39.16  Aligned_cols=35  Identities=37%  Similarity=0.781  Sum_probs=27.0

Q ss_pred             cCCCCCCCCCC-CeEec--CCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800        164 ECYENPLICLN-GRCDN--TLGSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       164 ~C~~~~~~C~~-~~C~~--~~~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      +|..++  |.| |+|+.  ...+|.|.|+.||+    |..|+..
T Consensus         6 ~c~~~~--C~ngG~C~~~~~~~~~~C~C~~gy~----G~~Ce~~   43 (48)
T d1nqlb_           6 LSHDGY--CLHDGVCMYIEALDKYACNCVVGYI----GERCQYR   43 (48)
T ss_dssp             STTCCE--ECTTCEEEEETTTTEEEEEECTTEE----STTSCEE
T ss_pred             CCCCCC--CCCCcEEeeeCCCCCeEEeCCCCcc----cCCCCcC
Confidence            444444  887 89975  44679999999999    9999754

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.0002  Score=40.60  Aligned_cols=41  Identities=22%  Similarity=0.476  Sum_probs=31.7

Q ss_pred             cCCCCCCCCCCeeeeCC-CceEeeCCCCCccCCCCCCccCCCc
Q psy11800         55 CYENPLICLNGRCDNTL-GSYRCACQPGYSPSPDGGFCVDRDE   96 (220)
Q Consensus        55 C~~~~~~C~~~~C~~~~-g~~~C~C~~g~~~~~~~~~C~~~~~   96 (220)
                      |..+.+.|.+ .|+++. ++|+|.|+.||.+..|+++|..+.+
T Consensus         3 C~~~NGgC~h-~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~   44 (57)
T d1rfnb_           3 CNIKNGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVP   44 (57)
T ss_dssp             TTGGGGGCSS-EEEECTTSCEEEECCTTEEECTTSSSEEECSS
T ss_pred             cCCCCCCccc-EeeeCCCCCeEeECCCCCEECCCCCccccCCC
Confidence            4444455653 899886 4799999999999999999987643

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00012  Score=42.63  Aligned_cols=36  Identities=33%  Similarity=0.812  Sum_probs=27.2

Q ss_pred             CCccCCCCCCC-CCCeee-----eCCCceEeeCCCCCccCCCCCCccC
Q psy11800         52 VDECYENPLIC-LNGRCD-----NTLGSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        52 i~~C~~~~~~C-~~~~C~-----~~~g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      .++|..++  | ++|+|+     +..++|.|.|++||.    |..|+.
T Consensus         6 c~ec~~~~--C~NgG~C~~~~~~~~~~~y~C~C~~gy~----G~~Ce~   47 (63)
T d1haea_           6 CAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTE   47 (63)
T ss_dssp             CCHHHHTT--SCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCE
T ss_pred             CCCCcCCc--CCCCCEEeecccccCCCCEEeECCCCCC----CCCcCC
Confidence            46777777  9 559995     455789999999998    566653

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.48  E-value=0.0031  Score=34.97  Aligned_cols=36  Identities=42%  Similarity=0.900  Sum_probs=26.0

Q ss_pred             CccCCCCCCC-CCCeeeeC--CCceEeeCCCCCccCCCCCCccCC
Q psy11800         53 DECYENPLIC-LNGRCDNT--LGSYRCACQPGYSPSPDGGFCVDR   94 (220)
Q Consensus        53 ~~C~~~~~~C-~~~~C~~~--~g~~~C~C~~g~~~~~~~~~C~~~   94 (220)
                      .+|..++  | ++|+|+..  ...|+|.|++||.    |..|+..
T Consensus         7 ~~c~~~~--C~NgG~C~~~~~~~~~~C~C~~gy~----G~~Ce~~   45 (53)
T d3egfa_           7 PSSYDGY--CLNGGVCMHIESLDSYTCNCVIGYS----GDRCQTR   45 (53)
T ss_dssp             CTTSSCC--SCSSCEEEEESSSSCEEEECCTTCC----SSSSCCC
T ss_pred             CCCCCCC--CCCCcEeeccCCCCCeEeECCCCCc----CCCCccC
Confidence            3455555  8 55999854  3579999999998    6677643

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.00085  Score=37.30  Aligned_cols=38  Identities=29%  Similarity=0.590  Sum_probs=29.3

Q ss_pred             CCCCCCCCCCeeeeCCC-ceEeeCCCCCccCCCCCCccCC
Q psy11800         56 YENPLICLNGRCDNTLG-SYRCACQPGYSPSPDGGFCVDR   94 (220)
Q Consensus        56 ~~~~~~C~~~~C~~~~g-~~~C~C~~g~~~~~~~~~C~~~   94 (220)
                      ..+.+.|.+ .|+++++ +|.|.|+.||.+..|+++|...
T Consensus         3 ~~~NGGC~h-~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~   41 (53)
T d2bz6l1           3 VNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPT   41 (53)
T ss_dssp             TSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred             CCCCCCCcC-EeeeCCCCCEEeECCCCCEECCCCCcccCC
Confidence            333445653 8988875 6899999999999999999754

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0049  Score=32.97  Aligned_cols=30  Identities=33%  Similarity=0.832  Sum_probs=24.3

Q ss_pred             CCCCCeEe--cCCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800        171 ICLNGRCD--NTLGSYRCACQPGYSPSPDGGFCVDR  204 (220)
Q Consensus       171 ~C~~~~C~--~~~~~~~C~C~~G~~~~~~g~~C~~~  204 (220)
                      .|.||.|.  .....+.|+|+.||.    |..|+.+
T Consensus        13 yC~nG~C~~~~~~~~~~C~C~~gY~----G~RCe~~   44 (46)
T d1k36a_          13 YCLHGQCIYLVDMSQNYCRCEVGYT----GVRCEHF   44 (46)
T ss_dssp             SCSSEEEEEETTTTEEEEEECTTCS----STTSCCC
T ss_pred             cCcCCEEEEeCCCCccEeECCCCce----ecCceee
Confidence            48888885  455679999999999    8899754

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.0027  Score=34.41  Aligned_cols=35  Identities=31%  Similarity=0.672  Sum_probs=25.1

Q ss_pred             CccCCCCCCC-CCCeeeeC--CCceEeeCCCCCccCCCCCCccC
Q psy11800         53 DECYENPLIC-LNGRCDNT--LGSYRCACQPGYSPSPDGGFCVD   93 (220)
Q Consensus        53 ~~C~~~~~~C-~~~~C~~~--~g~~~C~C~~g~~~~~~~~~C~~   93 (220)
                      .+|..++  | +.|.|+..  ...|+|.|+.||+    |..|+.
T Consensus         5 ~~c~~~~--C~ngG~C~~~~~~~~~~C~C~~gy~----G~~Ce~   42 (48)
T d1nqlb_           5 PLSHDGY--CLHDGVCMYIEALDKYACNCVVGYI----GERCQY   42 (48)
T ss_dssp             CSTTCCE--ECTTCEEEEETTTTEEEEEECTTEE----STTSCE
T ss_pred             CCCCCCC--CCCCcEEeeeCCCCCeEEeCCCCcc----cCCCCc
Confidence            3455555  8 44999864  4679999999999    566653

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.019  Score=31.16  Aligned_cols=31  Identities=26%  Similarity=0.548  Sum_probs=23.7

Q ss_pred             CCCC-CeE-ecCCCCeEEeCCCCCccCCCCCCCCcCC
Q psy11800        171 ICLN-GRC-DNTLGSYRCACQPGYSPSPDGGFCVDRD  205 (220)
Q Consensus       171 ~C~~-~~C-~~~~~~~~C~C~~G~~~~~~g~~C~~~~  205 (220)
                      .|.| +.| +.....+.|.|+.||.    |..|+.++
T Consensus        15 yC~nGgcc~~~~~~~~~C~C~~gy~----G~rCe~~~   47 (50)
T d1ioxa_          15 YCIKGRCRFVVAEQTPSCVCDEGYI----GARCERVD   47 (50)
T ss_dssp             SCTTCCEEEETTTTEEEECCCTTEE----TTTTCEEC
T ss_pred             CccCCeEEEeCCCCCcEeECCCCCe----eCCCccce
Confidence            4877 455 3455679999999999    99998654

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.89  E-value=0.033  Score=29.54  Aligned_cols=30  Identities=37%  Similarity=0.861  Sum_probs=23.0

Q ss_pred             CCCCCceEe--cCCCCeEeecCCCcEeCCCCCceee
Q psy11800        128 GMCANGMCI--NMDGSFKCQCKPGFVLSPTGHACID  161 (220)
Q Consensus       128 ~~c~~~~C~--~~~~~~~C~C~~G~~~~~~g~~C~~  161 (220)
                      ..|.||.|.  .....+.|.|++||    .|..|+.
T Consensus        12 ~yC~nG~C~~~~~~~~~~C~C~~gY----~G~RCe~   43 (46)
T d1k36a_          12 GYCLHGQCIYLVDMSQNYCRCEVGY----TGVRCEH   43 (46)
T ss_dssp             SSCSSEEEEEETTTTEEEEEECTTC----SSTTSCC
T ss_pred             CcCcCCEEEEeCCCCccEeECCCCc----eecCcee
Confidence            567778885  34567999999999    7878753

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.80  E-value=0.018  Score=31.08  Aligned_cols=32  Identities=28%  Similarity=0.624  Sum_probs=24.1

Q ss_pred             CCCCCC-eE-ecCCCCeEEeCCCCCccCCCCCCCCcCC
Q psy11800        170 LICLNG-RC-DNTLGSYRCACQPGYSPSPDGGFCVDRD  205 (220)
Q Consensus       170 ~~C~~~-~C-~~~~~~~~C~C~~G~~~~~~g~~C~~~~  205 (220)
                      ..|.|| .| +.....+.|+|+.||.    |..|+.++
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~----G~RCe~~~   46 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYV----GARCEHAD   46 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEE----STTSCEEC
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCE----ecCCcccc
Confidence            348885 44 3445678999999999    99998654

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.61  E-value=0.05  Score=27.57  Aligned_cols=33  Identities=36%  Similarity=0.963  Sum_probs=23.2

Q ss_pred             ecCcCCCCCCCCCCCeEecC-CCCeEEeCCCCCccCC
Q psy11800        161 DVDECYENPLICLNGRCDNT-LGSYRCACQPGYSPSP  196 (220)
Q Consensus       161 ~i~~C~~~~~~C~~~~C~~~-~~~~~C~C~~G~~~~~  196 (220)
                      .+|+|...+  |.. .|... .+.|+|+|.+||...+
T Consensus         3 ~vDPCf~~~--CE~-qCqP~~~~~Y~CiCaeGFaP~p   36 (43)
T d1dx5i1           3 PVDPCFRAN--CEY-QCQPLDQTSYLCVCAEGFAPIP   36 (43)
T ss_dssp             CCCGGGGCC--CSS-EEEECSSSCEEEECCTTEEEET
T ss_pred             ccccccCCC--cce-eeeeCCCCcceEEeccccccCC
Confidence            356776554  654 67664 4589999999998543

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.54  E-value=0.055  Score=27.86  Aligned_cols=29  Identities=38%  Similarity=1.059  Sum_probs=22.7

Q ss_pred             CCCCCeEec--CCCCeEEeCCCCCccCCCCCCCCc
Q psy11800        171 ICLNGRCDN--TLGSYRCACQPGYSPSPDGGFCVD  203 (220)
Q Consensus       171 ~C~~~~C~~--~~~~~~C~C~~G~~~~~~g~~C~~  203 (220)
                      .|.||+|..  ....+.|+|..||.    |..|+.
T Consensus         9 yCihG~C~~i~~l~~~~C~C~~gY~----G~RCq~   39 (41)
T d1xdtr_           9 FCIHGECKYVKELRAPSCICHPGYH----GERCHG   39 (41)
T ss_dssp             CCSSEEECCBGGGTBCCEEECTTEE----STTCCE
T ss_pred             EeECcEEeecCcCCCceeECCCCCe----ecCccc
Confidence            477788854  44677899999999    888863

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.35  E-value=0.22  Score=24.49  Aligned_cols=27  Identities=33%  Similarity=0.861  Sum_probs=21.1

Q ss_pred             CCC-CeEecC---CCCeEEeCCCCCccCCCCCCCC
Q psy11800        172 CLN-GRCDNT---LGSYRCACQPGYSPSPDGGFCV  202 (220)
Q Consensus       172 C~~-~~C~~~---~~~~~C~C~~G~~~~~~g~~C~  202 (220)
                      |.| |+|+..   .+-.+|.|+.+|.    |.+|+
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~f~----G~HCE   34 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCE   34 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEE----STTSC
T ss_pred             cccCCEEEEEehhcCCEEecCCcccC----ceeEE
Confidence            666 688754   3456899999999    89997

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.26  E-value=0.16  Score=27.10  Aligned_cols=31  Identities=23%  Similarity=0.661  Sum_probs=21.8

Q ss_pred             CCCCCc-eE-ecCCCCeEeecCCCcEeCCCCCceeec
Q psy11800        128 GMCANG-MC-INMDGSFKCQCKPGFVLSPTGHACIDV  162 (220)
Q Consensus       128 ~~c~~~-~C-~~~~~~~~C~C~~G~~~~~~g~~C~~i  162 (220)
                      ..|.|| .| +.....++|.|+.||    .|..|+.+
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy----~G~RCe~~   45 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGY----VGARCEHA   45 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTE----ESTTSCEE
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCC----EecCCccc
Confidence            456665 44 344567999999999    77788544

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.79  E-value=0.38  Score=25.70  Aligned_cols=31  Identities=23%  Similarity=0.571  Sum_probs=21.4

Q ss_pred             CCCCC-ceEe-cCCCCeEeecCCCcEeCCCCCceeec
Q psy11800        128 GMCAN-GMCI-NMDGSFKCQCKPGFVLSPTGHACIDV  162 (220)
Q Consensus       128 ~~c~~-~~C~-~~~~~~~C~C~~G~~~~~~g~~C~~i  162 (220)
                      ..|.| +.|. ...+.+.|.|+.||    .|..|+.+
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy----~G~rCe~~   46 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGY----IGARCERV   46 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTE----ETTTTCEE
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCC----eeCCCccc
Confidence            34555 4553 45567899999999    77777543