Conserved Domains and Related Protein Families
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function
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Probab=100.00 E-value=3.5e-52 Score=300.33 Aligned_cols=98 Identities=42% Similarity=0.761 Sum_probs=94.2
Q ss_pred cccccccceeeeeecccccccccccccccccCCCCcccchhhhHHHHHHHHHHhhhheeeeccchhhhhhhhhhhhhhHH
Q psy1183 6 SSILSIFSFSSTHFWGPVANWGIPLAAIADLKKDPSIISGKMTFALCLYSIVFMRFAWKVQPRNLLLLSCHFTNECAQIV 85 (106)
Q Consensus 6 ~s~~~~~~~~TvhFWaP~~kWgl~iA~l~D~~kppe~IS~~qt~aL~~tg~iw~Rys~~I~P~Ny~L~acn~~~~~~q~~ 85 (106)
+.+++.+||+|||||||++|||||||||+|++||||+||++||+|||+||+||||||++|+||||+||+||++|+++|++
T Consensus 8 ~~~~~~~gp~T~hFWaP~~kWgl~iA~i~D~~rppe~IS~~qt~aL~~tg~iw~Rys~~I~P~Ny~L~a~n~~~~~~q~~ 87 (119)
T PF03650_consen 8 RFWNSPAGPKTTHFWAPVAKWGLPIAGIADMKRPPEKISGPQTSALCATGLIWMRYSLVITPRNYLLFACNFFNATTQLY 87 (119)
T ss_pred HHHcCccccceEEeehhheeheeeeeehhhcCCCHHHHhHHHHHHHHHHHHHHHHHheeecCchHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhhhhhcccchhhhh
Q psy1183 86 QGSRFIKYNYIDSKKEQQ 103 (106)
Q Consensus 86 Ql~R~~~y~~~~~~~~~~ 103 (106)
|++|+++|++.+++++++
T Consensus 88 Ql~R~~~y~~~~~~~~~~ 105 (119)
T PF03650_consen 88 QLYRKLNYQYSQKKEAKQ 105 (119)
T ss_pred HHHHHHHHHhhcCchhHH
Confidence 999999999988877654
>KOG1590|consensus
Back Show alignment and domain information
Probab=100.00 E-value=2.5e-49 Score=288.00 Aligned_cols=103 Identities=60% Similarity=1.044 Sum_probs=98.6
Q ss_pred hhhhcccccccceeeeeecccccccccccccccccCCCCcccchhhhHHHHHHHHHHhhhheeeeccchhhhhhhhhhhh
Q psy1183 2 LQRISSILSIFSFSSTHFWGPVANWGIPLAAIADLKKDPSIISGKMTFALCLYSIVFMRFAWKVQPRNLLLLSCHFTNEC 81 (106)
Q Consensus 2 ~~~~~s~~~~~~~~TvhFWaP~~kWgl~iA~l~D~~kppe~IS~~qt~aL~~tg~iw~Rys~~I~P~Ny~L~acn~~~~~ 81 (106)
.+.++|++.++|++|||||||++|||||||+|.||+|+||.|||+||+|||+||.+||||+|.|+||||+||+||++|+.
T Consensus 12 ~~~~~ske~r~Y~~sTHFWGPvaNwGlpiAal~DmkK~P~~ISG~MT~AL~~YS~vFMRfA~~VqPRN~LLfaCHa~N~t 91 (132)
T KOG1590|consen 12 QDFLNSKEFRKYFMSTHFWGPVANWGLPIAALVDMKKSPEMISGRMTSALCLYSAVFMRFAWMVQPRNYLLFACHATNET 91 (132)
T ss_pred HHHhcChHHhhhhhhcccccchhhccchHHHHHhccCChhhccccchHHHHHHHHHHHHHHHhcCcchhhHHHHhhhhHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhhhhhhhcccchhhhhh
Q psy1183 82 AQIVQGSRFIKYNYIDSKKEQQS 104 (106)
Q Consensus 82 ~q~~Ql~R~~~y~~~~~~~~~~~ 104 (106)
+|++|++|+++|+|..+.++++.
T Consensus 92 aQ~~Qg~Rf~~~~Y~~~~~e~~~ 114 (132)
T KOG1590|consen 92 AQLAQGSRFLNYNYGSTGEEKKK 114 (132)
T ss_pred HHHHHHHHHHHHHhcccchhhcc
Confidence 99999999999999887776653
>KOG1589|consensus
Back Show alignment and domain information
Probab=100.00 E-value=1.3e-47 Score=275.00 Aligned_cols=97 Identities=26% Similarity=0.444 Sum_probs=91.5
Q ss_pred ccccccceeeeeecccccccccccccccccCCCCcccchhhhHHHHHHHHHHhhhheeeeccchhhhhhhhhhhhhhHHH
Q psy1183 7 SILSIFSFSSTHFWGPVANWGIPLAAIADLKKDPSIISGKMTFALCLYSIVFMRFAWKVQPRNLLLLSCHFTNECAQIVQ 86 (106)
Q Consensus 7 s~~~~~~~~TvhFWaP~~kWgl~iA~l~D~~kppe~IS~~qt~aL~~tg~iw~Rys~~I~P~Ny~L~acn~~~~~~q~~Q 86 (106)
-|..++||+|||||||++|||||+|||+|++||||+||+.|+.||++||+||+|||++|+|+||+||+||+|++++|+||
T Consensus 13 ~WnhpaGPKTVhFWAPt~KWglv~AglaD~arP~eklS~~q~~al~aTg~IWtRySlVI~PkN~~LfsVN~f~~~tg~~Q 92 (118)
T KOG1589|consen 13 LWNHPAGPKTVHFWAPTFKWGLVIAGLADLARPPEKLSYAQNAALTATGLIWTRYSLVITPKNYSLFSVNFFVAITGIYQ 92 (118)
T ss_pred HhcCCCCCcEEEEecchhhhhheeecHHhhcCChHHcChhhhHHHHHhhhhheeeeEEEeccchhhhHHHHHHHHHHHHH
Confidence 37789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcccchhhhh
Q psy1183 87 GSRFIKYNYIDSKKEQQ 103 (106)
Q Consensus 87 l~R~~~y~~~~~~~~~~ 103 (106)
|.|+++|+..++..+.+
T Consensus 93 L~Ri~~y~~~~~~~~~~ 109 (118)
T KOG1589|consen 93 LTRIANYQQQQKALEGE 109 (118)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999998776655443
>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) []
Back Show alignment and domain information
Probab=96.74 E-value=0.00095 Score=43.83 Aligned_cols=59 Identities=8% Similarity=0.107 Sum_probs=54.3
Q ss_pred CCCCcccchhhhHHHHHHHHHHhhhheeeeccchhhhhhhhhhhhhhHHHhhhhhhhhccc
Q psy1183 37 KKDPSIISGKMTFALCLYSIVFMRFAWKVQPRNLLLLSCHFTNECAQIVQGSRFIKYNYID 97 (106)
Q Consensus 37 ~kppe~IS~~qt~aL~~tg~iw~Rys~~I~P~Ny~L~acn~~~~~~q~~Ql~R~~~y~~~~ 97 (106)
+|..|.+|..+..+..+-+.+|.+|.+.+ +|+.++.+|++-...+++|+.=++.|...+
T Consensus 28 ~ks~~~~~~~~~~~~~~~~~~W~~YG~l~--~d~~i~~~N~~g~~~~~~~~~~~~~y~~~~ 86 (87)
T PF03083_consen 28 TKSTGSVSFPPFLAMFFNCVLWLIYGILI--NDWPIIVPNVFGLVLSIIYLVVYYIYPSKK 86 (87)
T ss_pred CCCCCccceehhHHHhhhccHhhhhhhhc--CCeeEEeeHHHHHHHHHHHHhheEEeCCCC
Confidence 69999999999999999999999999988 599999999999999999999888876543
Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This signature maps to transmembrane helices which are found in two copies in most members of the family.; GO: 0016021 integral to membrane
>KOG1623|consensus
Back Show alignment and domain information
Probab=91.38 E-value=0.19 Score=40.45 Aligned_cols=73 Identities=15% Similarity=0.235 Sum_probs=60.9
Q ss_pred ccccccccccccccc-----CCCCcccchhhhHHHHHHHHHHhhhheeeeccchhhhhhhhhhhhhhHHHhhhhhhhhcc
Q psy1183 22 PVANWGIPLAAIADL-----KKDPSIISGKMTFALCLYSIVFMRFAWKVQPRNLLLLSCHFTNECAQIVQGSRFIKYNYI 96 (106)
Q Consensus 22 P~~kWgl~iA~l~D~-----~kppe~IS~~qt~aL~~tg~iw~Rys~~I~P~Ny~L~acn~~~~~~q~~Ql~R~~~y~~~ 96 (106)
-++|=..-.|+++++ +|..|.+..+.+.|+.+.+..|+=|.+.+ +|..++.-|+.-...++.||.=+.+|...
T Consensus 133 ~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls~a~fl~a~~W~lYGlli--~D~~IaipN~iG~~l~~~QL~Ly~~y~~~ 210 (243)
T KOG1623|consen 133 AVFNISMFAAPLSVIRKVIKTKSVEYMPFPLSFALFLVAVQWLLYGLLI--KDFFIAIPNVLGFLLGLIQLILYFKYPKT 210 (243)
T ss_pred hhhhHHhhhccHHhhhhheecCceeeechHHHHHHHHHHHHHHHHHHHh--cCeEEEcccHHHHHHHHHHHHHhhhcCCC
Confidence 344555556677776 48999999999999999999999999988 99999999999999999999977665443
Homologous Structure Domains