Psyllid ID: psy11848


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
MQYIDPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLAMLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSYKCQPVDYSHNPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKYLWWKRHLTTLTVPSLT
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHEEEEEEcccccccccccccHHHHHHHHHHHHcccccccccccEEcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccc
cccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcc
mqyidprvndwflmespiptlVMVGIYLYIVVFLgpwimanrkpfklKTVLIVYNAAQVIFSLAMLWEHLMSGWLldysykcqpvdyshnptALRHLMSGWLldysykcqpvdyshnptalRVSFWVIIECfnqgghgtfsnLINNIVHVIMYFYYMVSAMGPEYQKYLWWKrhlttltvpslt
mqyidprvndWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLAMLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSYKCQPVDYSHNPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKYLWWKRHLTTLTVPSLT
MQYIDPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLAMLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSYKCQPVDYSHNPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKYLWWKRHLTTLTVPSLT
***IDPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLAMLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSYKCQPVDYSHNPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKYLWWKRHLTTLTV****
***IDPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLAMLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSYKCQPVDYSHNPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKYLWWKRHLTTLTVPSLT
MQYIDPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLAMLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSYKCQPVDYSHNPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKYLWWKRHLTTLTVPSLT
****DPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLAMLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSYKCQPVDYSHNPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKYLWWKRHLTTLTVPSLT
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MQYIDPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLAMLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSYKCQPVDYSHNPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKYLWWKRHLTTLTVPSLT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query184 2.2.26 [Sep-21-2011]
A0JNC4281 Elongation of very long c yes N/A 0.951 0.622 0.453 3e-41
A1L3X0281 Elongation of very long c yes N/A 0.956 0.626 0.455 5e-41
D4ADY9281 Elongation of very long c yes N/A 0.951 0.622 0.453 7e-41
Q9D2Y9281 Elongation of very long c yes N/A 0.951 0.622 0.442 2e-39
Q1HRV8 358 Elongation of very long c N/A N/A 0.956 0.491 0.438 8e-39
Q9BW60279 Elongation of very long c no N/A 0.972 0.641 0.413 7e-35
Q9JLJ5279 Elongation of very long c no N/A 0.972 0.641 0.403 1e-34
Q9GZR5314 Elongation of very long c no N/A 0.951 0.557 0.387 6e-26
Q3S8M4314 Elongation of very long c no N/A 0.951 0.557 0.382 9e-26
Q95K73314 Elongation of very long c N/A N/A 0.951 0.557 0.382 9e-26
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1 Back     alignment and function desciption
 Score =  167 bits (423), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 17/192 (8%)

Query: 5   DPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLA 64
           DPRV DW LM SP+P  +++G Y+Y V  LGP +M NRKPF+LK V+I YN + V+FS+ 
Sbjct: 22  DPRVEDWLLMSSPLPQTIILGFYVYFVTSLGPKLMENRKPFELKKVMITYNFSIVLFSVY 81

Query: 65  MLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSYKCQPVD--------YSH 116
           M +E +MSGW   YS++C  VDYS +PTALR + + WL  +S   + +D         + 
Sbjct: 82  MFYEFIMSGWGTGYSFRCDIVDYSQSPTALRMVRTCWLYYFSKFIELLDTIFFILRKKNS 141

Query: 117 NPTALRV--------SFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKY 168
             T L V        ++W  ++ F  GG GTF   +N  VHV+MY YY + A+GP+YQKY
Sbjct: 142 QVTFLHVFHHTIMPWTWWFGVK-FAAGGLGTFHAFLNTAVHVVMYSYYGLCALGPDYQKY 200

Query: 169 LWWKRHLTTLTV 180
           LWWK++LT+L +
Sbjct: 201 LWWKKYLTSLQL 212




Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.
Bos taurus (taxid: 9913)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1 Back     alignment and function description
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1 Back     alignment and function description
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1 Back     alignment and function description
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2 Back     alignment and function description
>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens GN=ELOVL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus GN=Elovl1 PE=2 SV=1 Back     alignment and function description
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1 Back     alignment and function description
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1 Back     alignment and function description
>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query184
383849794 304 PREDICTED: LOW QUALITY PROTEIN: elongati 0.940 0.569 0.587 4e-56
110764372 299 PREDICTED: elongation of very long chain 0.940 0.578 0.597 5e-56
380014340 299 PREDICTED: elongation of very long chain 0.940 0.578 0.597 1e-55
340722439 299 PREDICTED: elongation of very long chain 0.940 0.578 0.577 1e-54
156553612 305 PREDICTED: elongation of very long chain 0.940 0.567 0.572 1e-54
91093072268 PREDICTED: similar to elongation of very 0.940 0.645 0.572 2e-54
307188865 299 Elongation of very long chain fatty acid 0.940 0.578 0.567 2e-54
350416502 299 PREDICTED: elongation of very long chain 0.940 0.578 0.577 3e-54
332024773 323 Elongation of very long chain fatty acid 0.940 0.535 0.556 8e-54
307194401 377 Elongation of very long chain fatty acid 0.940 0.458 0.572 1e-50
>gi|383849794|ref|XP_003700521.1| PREDICTED: LOW QUALITY PROTEIN: elongation of very long chain fatty acids protein 7-like [Megachile rotundata] Back     alignment and taxonomy information
 Score =  222 bits (566), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 114/194 (58%), Positives = 133/194 (68%), Gaps = 21/194 (10%)

Query: 5   DPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLA 64
           DPRVNDW LM+SPIPT ++V +YLY V   GP +MANRKPFKL+  L+ YNA QV+FSL 
Sbjct: 50  DPRVNDWPLMDSPIPTFLIVVLYLYGVTIFGPRVMANRKPFKLREALLAYNAFQVVFSLG 109

Query: 65  MLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSYKCQPVD----------- 113
           M++EHLMSGWLLDYSYKCQPVDYSHNP+ALR     W    S   +  D           
Sbjct: 110 MMYEHLMSGWLLDYSYKCQPVDYSHNPSALRMANLCWWYFISKFTEFADTIFFILRKKDS 169

Query: 114 -------YSHNPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQ 166
                  Y H+ T L    W+ ++ F  GGHGT  NLINN VHVIMY YYMVSAMGPEYQ
Sbjct: 170 QVTFLHLYHHSLTPLET--WICVK-FIAGGHGTLGNLINNAVHVIMYLYYMVSAMGPEYQ 226

Query: 167 KYLWWKRHLTTLTV 180
           KYLWWK+HLTT+ +
Sbjct: 227 KYLWWKKHLTTVQL 240




Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110764372|ref|XP_001120770.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380014340|ref|XP_003691193.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Apis florea] Back     alignment and taxonomy information
>gi|340722439|ref|XP_003399613.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|156553612|ref|XP_001599942.1| PREDICTED: elongation of very long chain fatty acids protein 7-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|91093072|ref|XP_968636.1| PREDICTED: similar to elongation of very long chain fatty acids protein 4 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|307188865|gb|EFN73418.1| Elongation of very long chain fatty acids protein 7 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|350416502|ref|XP_003490969.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|332024773|gb|EGI64962.1| Elongation of very long chain fatty acids protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307194401|gb|EFN76719.1| Elongation of very long chain fatty acids protein AAEL008004 [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query184
UNIPROTKB|A0JNC4281 ELOVL7 "Elongation of very lon 0.940 0.615 0.463 2.8e-41
UNIPROTKB|G5E592260 ELOVL7 "Elongation of very lon 0.940 0.665 0.463 2.8e-41
UNIPROTKB|A1L3X0281 ELOVL7 "Elongation of very lon 0.940 0.615 0.468 3.6e-41
FB|FBgn0051523 354 CG31523 [Drosophila melanogast 0.934 0.485 0.476 4.6e-41
RGD|1310560281 Elovl7 "ELOVL fatty acid elong 0.940 0.615 0.457 7.5e-41
UNIPROTKB|D6RHD0268 ELOVL7 "Elongation of very lon 0.934 0.641 0.465 1.6e-40
ZFIN|ZDB-GENE-030131-5485282 elovl7b "ELOVL family member 7 0.940 0.613 0.452 2.6e-40
UNIPROTKB|E2RFT7288 ELOVL7 "Uncharacterized protei 0.940 0.600 0.447 6.8e-40
UNIPROTKB|J9NT60281 ELOVL7 "Uncharacterized protei 0.940 0.615 0.447 6.8e-40
FB|FBgn0051522 365 CG31522 [Drosophila melanogast 0.940 0.473 0.460 1.1e-39
UNIPROTKB|A0JNC4 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 88/190 (46%), Positives = 122/190 (64%)

Query:     5 DPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLA 64
             DPRV DW LM SP+P  +++G Y+Y V  LGP +M NRKPF+LK V+I YN + V+FS+ 
Sbjct:    22 DPRVEDWLLMSSPLPQTIILGFYVYFVTSLGPKLMENRKPFELKKVMITYNFSIVLFSVY 81

Query:    65 MLWEHLMSGWLLDYSYKCQPVDYSHNPTALRHLMSGWL---------LDYSY-----KCQ 110
             M +E +MSGW   YS++C  VDYS +PTALR + + WL         LD  +     K  
Sbjct:    82 MFYEFIMSGWGTGYSFRCDIVDYSQSPTALRMVRTCWLYYFSKFIELLDTIFFILRKKNS 141

Query:   111 PVDYSH--NPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKY 168
              V + H  + T +  ++W  ++ F  GG GTF   +N  VHV+MY YY + A+GP+YQKY
Sbjct:   142 QVTFLHVFHHTIMPWTWWFGVK-FAAGGLGTFHAFLNTAVHVVMYSYYGLCALGPDYQKY 200

Query:   169 LWWKRHLTTL 178
             LWWK++LT+L
Sbjct:   201 LWWKKYLTSL 210




GO:0019367 "fatty acid elongation, saturated fatty acid" evidence=ISS
GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISS
GO:0005783 "endoplasmic reticulum" evidence=ISS
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA
GO:0034626 "fatty acid elongation, polyunsaturated fatty acid" evidence=IEA
GO:0016740 "transferase activity" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
UNIPROTKB|G5E592 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|A1L3X0 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0051523 CG31523 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|1310560 Elovl7 "ELOVL fatty acid elongase 7" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|D6RHD0 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5485 elovl7b "ELOVL family member 7, elongation of long chain fatty acids (yeast) b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2RFT7 ELOVL7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9NT60 ELOVL7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
D4ADY9ELOV7_RAT2, ., 3, ., 1, ., n, 80.45310.95100.6227yesN/A
Q9D2Y9ELOV7_MOUSE2, ., 3, ., 1, ., n, 80.44270.95100.6227yesN/A
A0JNC4ELOV7_BOVIN2, ., 3, ., 1, ., n, 80.45310.95100.6227yesN/A
A1L3X0ELOV7_HUMAN2, ., 3, ., 1, ., n, 80.45540.95650.6263yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query184
pfam01151244 pfam01151, ELO, GNS1/SUR4 family 1e-35
>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family Back     alignment and domain information
 Score =  124 bits (314), Expect = 1e-35
 Identities = 62/187 (33%), Positives = 90/187 (48%), Gaps = 25/187 (13%)

Query: 12  FLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLAMLWEHLM 71
            L+ SP P ++++ +YL   VFLGP IM NRKPF LK +LIV+N   V+ SL   +  L 
Sbjct: 1   PLLSSPWPVILIIVLYLV-FVFLGPKIMRNRKPFDLKRLLIVHNLFLVLLSLYGFYGLLA 59

Query: 72  SGWLLDYSYKCQPVDYSHNPTALRHLMSGWLLDYSY----------------KCQPVD-- 113
                   Y    V YS +P A+R  + G+                      K + +   
Sbjct: 60  GAGWGRGLYLALCVCYSFDPGAIRMGLVGFWYWLFLSKFLELLDTVFLVLRKKQRQLSFL 119

Query: 114 --YSHNPTALRVSFWVIIECFNQGGHGTFSNLINNIVHVIMYFYYMVSAMGPEYQKYLWW 171
             Y H    L   +  +   +  GGH  F  L+N+ VHVIMYFYY ++A+G      +WW
Sbjct: 120 HVYHHATMLL---YSWLGLKYGPGGHFWFIALLNSFVHVIMYFYYFLAALGAR-GLPVWW 175

Query: 172 KRHLTTL 178
           K+++T L
Sbjct: 176 KKYITQL 182


Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 184
KOG3071|consensus274 100.0
PF01151250 ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr 100.0
PTZ00251272 fatty acid elongase; Provisional 100.0
KOG3072|consensus282 100.0
>KOG3071|consensus Back     alignment and domain information
Probab=100.00  E-value=1.9e-44  Score=297.09  Aligned_cols=177  Identities=40%  Similarity=0.663  Sum_probs=157.3

Q ss_pred             CCCcccccccCcCCchHHHHHHHHHHHHHHHhhhhhhcCCCCCccchhhhhhhHHHHHHHHHHHHHHHHHhhh-cceeee
Q psy11848          3 YIDPRVNDWFLMESPIPTLVMVGIYLYIVVFLGPWIMANRKPFKLKTVLIVYNAAQVIFSLAMLWEHLMSGWL-LDYSYK   81 (184)
Q Consensus         3 ~~d~~~~~w~l~~~~~~~~~~~~~Yl~~v~~~~~~~M~~R~p~~l~~~~~~~N~~l~~~s~~~~~~~~~~~~~-~~~~~~   81 (184)
                      .+|++++ ||++++|.++..++.+|+ +|+..||++||||||++||.++.+||+.|++.|++++.+.....+. +.+++.
T Consensus        17 ~~~~~v~-~~~l~s~~~~~~il~~yl-~v~~~G~~~m~nrkp~~l~~~~~vyN~~~vl~s~~i~~~~~~~~~~~~~y~l~   94 (274)
T KOG3071|consen   17 SPDDRVR-SPLLSSPWPLLSILLAYL-FVLKLGPKLMRNRKPLKLRGLSQVYNLGQVLLSAAIFLEGELWRWLKTAYNLR   94 (274)
T ss_pred             CCCcccc-chhccCcHHHHHHHHHHH-HHHHhcHhhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccceE
Confidence            4567777 899999999999999999 6659999999999999999999999999999999977766655554 479999


Q ss_pred             ecccCCCCCccceeeeeEEEeeeee--------------ccccccc----ccCchhhhhhhhheeeeccccCCCchhhhh
Q psy11848         82 CQPVDYSHNPTALRHLMSGWLLDYS--------------YKCQPVD----YSHNPTALRVSFWVIIECFNQGGHGTFSNL  143 (184)
Q Consensus        82 C~~~~~~~~~~~~~~~~~~~~~~~s--------------~k~~~vs----YHH~~~~l~~~~w~~~~k~~~~~~~~~~~~  143 (184)
                      |++++.++.+...+...++|++++|              ||.+|++    |||..|+.  .+|..+ ++.++|+.++.+.
T Consensus        95 c~~~~~~~~~~~~r~~~~~~~yylsKflel~DTvFfVLRKk~rqlsFLHvyHH~~m~~--~~~~~l-~~~~~g~~~~~~~  171 (274)
T KOG3071|consen   95 CQPCFPSDHEPKLRERFWSYLYYLSKFLELLDTVFFVLRKKDRQLSFLHVYHHGVMAF--LSYLWL-KFYGGGHGFFAIL  171 (274)
T ss_pred             EEecCCCCCCcceeehHHHHHHHHHHHHHHHhheeeEEEccCCceEEEEEEecchHHH--hhhhee-EEeCCceeeeeee
Confidence            9998877666666677777766555              7779999    99999999  999999 9988899999999


Q ss_pred             hhhhHHHHHHHHHHHHhhCCCccccchhhHhhhhhhhccCC
Q psy11848        144 INNIVHVIMYFYYMVSAMGPEYQKYLWWKRHLTTLTVPSLT  184 (184)
Q Consensus       144 ~Ns~VH~iMY~YY~l~a~g~~~~~~~~~k~~iT~~Qi~Qf~  184 (184)
                      +|++||++||+||+++|+|+|+++++|||+++|.+|++||+
T Consensus       172 lNs~VHviMY~YYflsa~G~~v~~~lWWkky~t~vQlvqf~  212 (274)
T KOG3071|consen  172 LNSFVHVIMYGYYFLSAFGPRVQWYLWWKKYITIVQLVQFL  212 (274)
T ss_pred             hhhhHHHHHHHHHHHHhhCcCccccchHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999984



>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established Back     alignment and domain information
>PTZ00251 fatty acid elongase; Provisional Back     alignment and domain information
>KOG3072|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00