Psyllid ID: psy11903

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MEEIPDVVIMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYFIMVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA
Secondary Structure (PSIPRED)
ccccccEEEEEccccccccccccccccEEEEEEEcccccEEEEEccccEEEEEEEEccccccccEEEcccccccccccccccccccccccEEEccccccccccEEEccccEEEEccccccccccccccccccEEEEEEEEEEEccccccccccccccccccccccccEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEccccEccccccccccEEEEEEEEccccEEEEEEEEcEEEEEEEcccccccccEEEEccccHHcccHHcHHHHHHHHHHHHccccccccccccccccccccEccHHHHHHccccccccccccccccEEHHcccccccccccHHHHHHcccEHHcccEEEEccccccccc
Coil and Loop (DISEMBL)
MEEIPDVVIMEDKFgecinesngqvlpvrrftltnsqrMSVQVIDYGAtittikvpdkrgnvddvvlgfDDMREEIYFIMVCSKCEKKlgkvitpdnwksgsrntiesggrrigenkaltaskarfnpytqkfesckicrQKVHQVGSHYCQACAYKKGICAMCGKKLLDVknykqsaa
Flexible Loop (DISEMBL)
MEEIPDVVIMEDKFgecinesngqvlpVRRFTLTNSQRMSVQVIDYGAtittikvpdkrgnvDDVVLGFDDMREEIYFIMVCSKCEKklgkvitpdnwksgsrntiesggrrigenkaltaskarfnpytQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVknykqsaa
Low Complexity Region (SEG)
MEEIPDVVIMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYFIMVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA
Disordered region (IsUnstruct)
******VVIMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYFIMVCSKCEKKLGKVITPDNW*************************ARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVK*******
Disordered Region (DISOPRED)
******V***EDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYFIMVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYK****
Disordered Region (DISEMBL)
MEEIPDVVIMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYFIMVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA
Disordered Region (DISPRO)
****PDVVIMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYFIMVCSKCEKKLGKVITPDNWKSG********GRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNY*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEEIPDVVIMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYFIMVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	179	2.2.26 [Sep-21-2011]
Q792Q4	101	Cysteine-rich PDZ-binding	yes	N/A	0.553	0.980	0.73	2e-39
O70333	101	Cysteine-rich PDZ-binding	yes	N/A	0.553	0.980	0.73	2e-39
Q9P021	101	Cysteine-rich PDZ-binding	yes	N/A	0.553	0.980	0.73	4e-39
Q3ZC66	101	Cysteine-rich PDZ-binding	yes	N/A	0.553	0.980	0.73	4e-39
Q6NU28	101	Cysteine-rich PDZ-binding	N/A	N/A	0.553	0.980	0.73	1e-38
Q567Z6	101	Cysteine-rich PDZ-binding	yes	N/A	0.553	0.980	0.7	6e-38
Q5ZKB6	101	Cysteine-rich PDZ-binding	yes	N/A	0.553	0.980	0.71	6e-38
Q1WCC0	101	Cysteine-rich PDZ-binding	N/A	N/A	0.553	0.980	0.71	9e-38
P05149	381	Aldose 1-epimerase OS=Aci	yes	N/A	0.374	0.175	0.337	2e-05
Q5EA79	342	Aldose 1-epimerase OS=Bos	no	N/A	0.351	0.184	0.352	6e-05

>sp|Q792Q4|CRIPT_RAT Cysteine-rich PDZ-binding protein OS=Rattus norvegicus GN=Cript PE=1 SV=1

 Score =  161 bits (407), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 73/100 (73%), Positives = 86/100 (86%), Gaps = 1/100 (1%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
           MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1   MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.
Rattus norvegicus (taxid: 10116)

>sp|O70333|CRIPT_MOUSE Cysteine-rich PDZ-binding protein OS=Mus musculus GN=Cript PE=1 SV=1

 Score =  161 bits (407), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 73/100 (73%), Positives = 86/100 (86%), Gaps = 1/100 (1%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
           MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1   MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.

Mus musculus (taxid: 10090)

>sp|Q9P021|CRIPT_HUMAN Cysteine-rich PDZ-binding protein OS=Homo sapiens GN=CRIPT PE=1 SV=1

 Score =  160 bits (405), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 73/100 (73%), Positives = 85/100 (85%), Gaps = 1/100 (1%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
           MVC KCEKKLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1   MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.

Homo sapiens (taxid: 9606)

>sp|Q3ZC66|CRIPT_BOVIN Cysteine-rich PDZ-binding protein OS=Bos taurus GN=CRIPT PE=1 SV=1

 Score =  160 bits (405), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 73/100 (73%), Positives = 85/100 (85%), Gaps = 1/100 (1%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
           MVC KCEKKLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct: 1   MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.

Bos taurus (taxid: 9913)

>sp|Q6NU28|CRIPT_XENLA Cysteine-rich PDZ-binding protein OS=Xenopus laevis GN=cript PE=3 SV=1

 Score =  158 bits (400), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 73/100 (73%), Positives = 84/100 (84%), Gaps = 1/100 (1%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
           MVC KCEKKLG VITPD WKSG+RNT ESGGR++ ENKALT+  ARFNPY + KF  C+I
Sbjct: 1   MVCDKCEKKLGTVITPDTWKSGARNTTESGGRKLNENKALTSKTARFNPYGKNKFAICRI 60

Query: 139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+L+ KNYKQ++
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLETKNYKQTS 100

Xenopus laevis (taxid: 8355)

>sp|Q567Z6|CRIPT_DANRE Cysteine-rich PDZ-binding protein OS=Danio rerio GN=cript PE=3 SV=1

 Score =  156 bits (395), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 84/100 (84%), Gaps = 1/100 (1%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQK-FESCKI 138
           MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENK LT+ KARF+PY +  F +C+I
Sbjct: 1   MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKMLTSKKARFDPYGKSGFATCRI 60

Query: 139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           C+  VHQ GSHYCQ CAYKKGICAMCGKK++D KNYKQ++
Sbjct: 61  CKSSVHQSGSHYCQGCAYKKGICAMCGKKVIDTKNYKQTS 100

Danio rerio (taxid: 7955)

>sp|Q5ZKB6|CRIPT_CHICK Cysteine-rich PDZ-binding protein OS=Gallus gallus GN=CRIPT PE=3 SV=1

 Score =  156 bits (395), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 84/100 (84%), Gaps = 1/100 (1%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
           MVC KCE+KLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF  C+I
Sbjct: 1   MVCEKCERKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFAICRI 60

Query: 139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           C+  VHQ GSHYCQ CAYKKGIC+MCGKK+LD KNYKQ++
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICSMCGKKVLDTKNYKQTS 100

Gallus gallus (taxid: 9031)

>sp|Q1WCC0|CRIPT_ICTPU Cysteine-rich PDZ-binding protein OS=Ictalurus punctatus GN=cript PE=3 SV=1

 Score =  155 bits (393), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 83/100 (83%), Gaps = 1/100 (1%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQK-FESCKI 138
           MVC KCEKKLG+VITPD WK G+RNT ESGGR+I ENK LT+ KA F+PY +  F +C+I
Sbjct: 1   MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKINENKMLTSKKAGFDPYGKSGFSTCRI 60

Query: 139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct: 61  CKSSVHQSGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

Ictalurus punctatus (taxid: 7998)

>sp|P05149|GALM_ACICA Aldose 1-epimerase OS=Acinetobacter calcoaceticus GN=mro PE=1 SV=1

 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 10/77 (12%)

Query: 22  NGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDM--------R 73
           NGQ   V  +T++N+  +SV  I +G  IT I  PD +G  +++VLGFDD+        +
Sbjct: 33  NGQ--KVDLYTMSNNNGVSVSFISFGGVITQILTPDAQGKQNNIVLGFDDLKGYEVTDTK 90

Query: 74  EEIYFIMVCSKCEKKLG 90
           E I+F  +  +   ++G
Sbjct: 91  EGIHFGGLIGRYANRIG 107

Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose.

Acinetobacter calcoaceticus (taxid: 471)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

>sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1

 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)

Query: 28 VRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDD----MREEIYFIMVCS 83
          V +F L  S ++ V +I +G TIT ++V D++G   DVVLGFD+    ++++ YF  V  
Sbjct: 19 VEKFQL-QSDQLRVDIISWGCTITALEVKDRQGRASDVVLGFDELEGYLQKQPYFGAVVG 77

Query: 84 KCEKKLGK 91
          +   ++ K
Sbjct: 78 RVANRIAK 85

Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose.

Bos taurus (taxid: 9913)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
307169189	1082	Histone demethylase UTX [Camponotus flor	0.581	0.096	0.758	4e-45
340710093	100	PREDICTED: cysteine-rich PDZ-binding pro	0.553	0.99	0.828	5e-44
383853702	100	PREDICTED: cysteine-rich PDZ-binding pro	0.553	0.99	0.818	6e-44
307206956	100	Cysteine-rich PDZ-binding protein [Harpe	0.553	0.99	0.818	7e-44
110771988	100	PREDICTED: cysteine-rich PDZ-binding pro	0.553	0.99	0.818	1e-43
91092996	100	PREDICTED: similar to Cysteine-rich PDZ-	0.553	0.99	0.828	1e-43
322798625	100	hypothetical protein SINV_08093 [Solenop	0.553	0.99	0.828	1e-43
357627435	507	putative postsynaptic protein CRIPT [Dan	0.541	0.191	0.814	2e-43
332023190	100	Cysteine-rich PDZ-binding protein [Acrom	0.553	0.99	0.818	4e-43
156548596	100	PREDICTED: cysteine-rich PDZ-binding pro	0.558	1.0	0.78	1e-42

>gi|307169189|gb|EFN62005.1| Histone demethylase UTX [Camponotus floridanus]

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 85/112 (75%), Positives = 96/112 (85%), Gaps = 8/112 (7%)

Query: 76   IYFI--------MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFN 127
            IYF+        MVC KCEKKLGKVITPD WK+G+RNT+ESGGR++GENKAL+A KARFN
Sbjct: 971  IYFLPQRRPNPDMVCEKCEKKLGKVITPDPWKTGARNTVESGGRQVGENKALSAGKARFN 1030

Query: 128  PYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 179
            PYT KFE C+ICRQKVHQVGSHYCQ+CAYKK ICAMCGKKL++ KNYKQSA 
Sbjct: 1031 PYTTKFEICRICRQKVHQVGSHYCQSCAYKKAICAMCGKKLMNTKNYKQSAT 1082

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340710093|ref|XP_003393631.1| PREDICTED: cysteine-rich PDZ-binding protein-like [Bombus terrestris] gi|350413867|ref|XP_003490138.1| PREDICTED: cysteine-rich PDZ-binding protein-like [Bombus impatiens]

 Score =  182 bits (461), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 91/99 (91%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 139
           MVC KCEKKLGKVITPD WKSG+RNT+ESGGR++GENKAL+A KARFNPYT  FE+C+IC
Sbjct: 1   MVCEKCEKKLGKVITPDPWKSGARNTVESGGRKVGENKALSAGKARFNPYTVTFETCRIC 60

Query: 140 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           RQKVHQVGSHYCQ+CAYKK ICAMCGKKL+  KNYKQSA
Sbjct: 61  RQKVHQVGSHYCQSCAYKKAICAMCGKKLMSTKNYKQSA 99

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853702|ref|XP_003702361.1| PREDICTED: cysteine-rich PDZ-binding protein-like [Megachile rotundata]

 Score =  182 bits (461), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 91/99 (91%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 139
           MVC KCEKKLG+VITPD WKSG+RNT+ESGGR++GENKAL+A KARFNPYT  FE+C+IC
Sbjct: 1   MVCEKCEKKLGRVITPDPWKSGARNTVESGGRKVGENKALSAGKARFNPYTATFETCRIC 60

Query: 140 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           RQKVHQVGSHYCQ+CAYKK ICAMCGKKL+  KNYKQSA
Sbjct: 61  RQKVHQVGSHYCQSCAYKKAICAMCGKKLMSTKNYKQSA 99

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206956|gb|EFN84800.1| Cysteine-rich PDZ-binding protein [Harpegnathos saltator]

 Score =  182 bits (461), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 92/99 (92%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 139
           MVC KC KKLG VITPD WK+G+RNT+ESGGR++GENKAL+A KARF PYT KFESC+IC
Sbjct: 1   MVCEKCAKKLGTVITPDPWKAGARNTVESGGRKVGENKALSAGKARFTPYTTKFESCRIC 60

Query: 140 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           RQKVHQVGSHYCQ+CAYKKGICAMCGK+LL++KNYKQSA
Sbjct: 61  RQKVHQVGSHYCQSCAYKKGICAMCGKRLLNIKNYKQSA 99

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110771988|ref|XP_001120258.1| PREDICTED: cysteine-rich PDZ-binding protein [Apis mellifera] gi|380026821|ref|XP_003697139.1| PREDICTED: cysteine-rich PDZ-binding protein-like [Apis florea]

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 91/99 (91%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 139
           MVC KCEKKLGKVITPD WK+G+RNT+ESGGR++GENKAL+A KARFNPYT  FE+C+IC
Sbjct: 1   MVCEKCEKKLGKVITPDPWKNGARNTVESGGRKVGENKALSAGKARFNPYTTTFETCRIC 60

Query: 140 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           RQKVHQVGSHYCQ+CAYKK ICAMCGKKL+  KNYKQSA
Sbjct: 61  RQKVHQVGSHYCQSCAYKKAICAMCGKKLMSTKNYKQSA 99

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91092996|ref|XP_968315.1| PREDICTED: similar to Cysteine-rich PDZ-binding protein (Cysteine-rich interactor of PDZ three) (Cysteine-rich interactor of PDZ3) [Tribolium castaneum] gi|270003175|gb|EEZ99622.1| hypothetical protein TcasGA2_TC002140 [Tribolium castaneum]

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 90/99 (90%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 139
           MVC KC+KKLGKVITPD WKSG+RNT ESGGR++ ENKALTASK RFNPYT  FE+C+IC
Sbjct: 1   MVCEKCQKKLGKVITPDPWKSGARNTTESGGRKVNENKALTASKNRFNPYTSSFETCRIC 60

Query: 140 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           RQKVHQVGSHYCQ+CAYKKGICAMCGKKLL  KNYKQS+
Sbjct: 61  RQKVHQVGSHYCQSCAYKKGICAMCGKKLLSTKNYKQSS 99

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322798625|gb|EFZ20229.1| hypothetical protein SINV_08093 [Solenopsis invicta]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 90/99 (90%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 139
           MVC KCEKKLGKVITPD WK+G+RNT ESGGR++GENKAL+A KARFNPYT KFE C+IC
Sbjct: 1   MVCEKCEKKLGKVITPDPWKTGARNTTESGGRKVGENKALSAGKARFNPYTTKFEICRIC 60

Query: 140 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           RQKVHQVGSHYCQ+CAYKK ICAMCGKKL+  KNYKQSA
Sbjct: 61  RQKVHQVGSHYCQSCAYKKAICAMCGKKLMSTKNYKQSA 99

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357627435|gb|EHJ77123.1| putative postsynaptic protein CRIPT [Danaus plexippus]

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 79/97 (81%), Positives = 88/97 (90%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 139
           MVC KCEKKLG+VITPD WK+G+RNT+ESGGR++GENKALTA KAR+NPYT KF  CKIC
Sbjct: 1   MVCDKCEKKLGRVITPDPWKTGARNTVESGGRKVGENKALTAKKARYNPYTSKFYECKIC 60

Query: 140 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQ 176
           R KVHQVGSHYCQACAYKKGICAMCGKK+LD  NY+Q
Sbjct: 61  RTKVHQVGSHYCQACAYKKGICAMCGKKILDTSNYRQ 97

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332023190|gb|EGI63446.1| Cysteine-rich PDZ-binding protein [Acromyrmex echinatior]

 Score =  179 bits (454), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 90/99 (90%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 139
           MVC KCEKKLGKVITPD WK+G+RNT ESGGR++GENKAL+A KARFNPYT KFE C+IC
Sbjct: 1   MVCEKCEKKLGKVITPDPWKTGARNTTESGGRKVGENKALSAGKARFNPYTTKFEICRIC 60

Query: 140 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
           RQKVHQVGSHYCQ+CAYKK IC+MCGKKL+  KNYKQSA
Sbjct: 61  RQKVHQVGSHYCQSCAYKKAICSMCGKKLMSTKNYKQSA 99

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156548596|ref|XP_001607753.1| PREDICTED: cysteine-rich PDZ-binding protein-like [Nasonia vitripennis]

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 78/100 (78%), Positives = 91/100 (91%)

Query: 80  MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 139
           MVC KCEKKLGKVITPD WK+G+RNT+ESGGR++GENKAL+ +K RFNPYT KFE+C+IC
Sbjct: 1   MVCDKCEKKLGKVITPDPWKAGARNTVESGGRKVGENKALSTAKNRFNPYTAKFEACRIC 60

Query: 140 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSAA 179
           RQKVHQ GSHYCQ+CAYKK ICAMCGKKL+  KNY+QSA+
Sbjct: 61  RQKVHQAGSHYCQSCAYKKAICAMCGKKLMSTKNYRQSAS 100

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
MGI|MGI:1929655	101	Cript "cysteine-rich PDZ-bindi	0.553	0.980	0.73	8.7e-40
RGD|621545	101	Cript "cysteine-rich PDZ-bindi	0.553	0.980	0.73	8.7e-40
UNIPROTKB|Q3ZC66	101	CRIPT "Cysteine-rich PDZ-bindi	0.553	0.980	0.73	1.8e-39
UNIPROTKB|Q9P021	101	CRIPT "Cysteine-rich PDZ-bindi	0.553	0.980	0.73	1.8e-39
UNIPROTKB|Q5ZKB6	101	CRIPT "Cysteine-rich PDZ-bindi	0.553	0.980	0.71	2.1e-38
ZFIN|ZDB-GENE-050417-451	101	cript "cysteine-rich PDZ-bindi	0.553	0.980	0.7	2.1e-38
TAIR|locus:2195738	98	AT1G61780 "AT1G61780" [Arabido	0.536	0.979	0.612	6.2e-30
WB|WBGene00044614	99	C36B1.14 [Caenorhabditis elega	0.530	0.959	0.43	9.5e-18
FB|FBgn0035679	364	CG10467 [Drosophila melanogast	0.368	0.181	0.507	4.6e-11
FB|FBgn0030525	392	CG10996 [Drosophila melanogast	0.368	0.168	0.484	5.5e-11

MGI|MGI:1929655 Cript "cysteine-rich PDZ-binding protein" [Mus musculus (taxid:10090)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 73/100 (73%), Positives = 86/100 (86%)

Query:    80 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
             MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct:     1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query:   139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
             C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct:    61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

GO:0005737 "cytoplasm" evidence=IEA

GO:0014069 "postsynaptic density" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=ISO

GO:0030425 "dendrite" evidence=ISO

GO:0031122 "cytoplasmic microtubule organization" evidence=ISO

GO:0032403 "protein complex binding" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0043025 "neuronal cell body" evidence=ISO

GO:0043197 "dendritic spine" evidence=ISO

GO:0043198 "dendritic shaft" evidence=ISO

GO:0045184 "establishment of protein localization" evidence=ISO

GO:0045202 "synapse" evidence=IEA

RGD|621545 Cript "cysteine-rich PDZ-binding protein" [Rattus norvegicus (taxid:10116)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 73/100 (73%), Positives = 86/100 (86%)

Query:    80 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
             MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct:     1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query:   139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
             C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct:    61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

GO:0005737 "cytoplasm" evidence=IEA

GO:0014069 "postsynaptic density" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=IDA

GO:0030425 "dendrite" evidence=IDA

GO:0031122 "cytoplasmic microtubule organization" evidence=IDA

GO:0032403 "protein complex binding" evidence=IPI

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043197 "dendritic spine" evidence=IDA

GO:0043198 "dendritic shaft" evidence=IDA

GO:0045184 "establishment of protein localization" evidence=IDA

UNIPROTKB|Q3ZC66 CRIPT "Cysteine-rich PDZ-binding protein" [Bos taurus (taxid:9913)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 73/100 (73%), Positives = 85/100 (85%)

Query:    80 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
             MVC KCEKKLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct:     1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query:   139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
             C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct:    61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

GO:0045202 "synapse" evidence=IEA

GO:0043197 "dendritic spine" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

UNIPROTKB|Q9P021 CRIPT "Cysteine-rich PDZ-binding protein" [Homo sapiens (taxid:9606)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 73/100 (73%), Positives = 85/100 (85%)

Query:    80 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
             MVC KCEKKLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF +C+I
Sbjct:     1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query:   139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
             C+  VHQ GSHYCQ CAYKKGICAMCGKK+LD KNYKQ++
Sbjct:    61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100

GO:0030054 "cell junction" evidence=IEA

GO:0014069 "postsynaptic density" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=IEA

GO:0031122 "cytoplasmic microtubule organization" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043198 "dendritic shaft" evidence=IEA

GO:0045184 "establishment of protein localization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q5ZKB6 CRIPT "Cysteine-rich PDZ-binding protein" [Gallus gallus (taxid:9031)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 71/100 (71%), Positives = 84/100 (84%)

Query:    80 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQ-KFESCKI 138
             MVC KCE+KLG VITPD WK G+RNT ESGGR++ ENKALT+ KARF+PY + KF  C+I
Sbjct:     1 MVCEKCERKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFAICRI 60

Query:   139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
             C+  VHQ GSHYCQ CAYKKGIC+MCGKK+LD KNYKQ++
Sbjct:    61 CKSSVHQPGSHYCQGCAYKKGICSMCGKKVLDTKNYKQTS 100

GO:0005737 "cytoplasm" evidence=IEA

ZFIN|ZDB-GENE-050417-451 cript "cysteine-rich PDZ-binding protein" [Danio rerio (taxid:7955)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 70/100 (70%), Positives = 84/100 (84%)

Query:    80 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQK-FESCKI 138
             MVC KCEKKLG+VITPD WK G+RNT ESGGR++ ENK LT+ KARF+PY +  F +C+I
Sbjct:     1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKMLTSKKARFDPYGKSGFATCRI 60

Query:   139 CRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQSA 178
             C+  VHQ GSHYCQ CAYKKGICAMCGKK++D KNYKQ++
Sbjct:    61 CKSSVHQSGSHYCQGCAYKKGICAMCGKKVIDTKNYKQTS 100

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

TAIR|locus:2195738 AT1G61780 "AT1G61780" [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 60/98 (61%), Positives = 71/98 (72%)

Query:    80 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKIC 139
             MVC KCEKKL KVI PD WK G+RN  E GGR+I ENK L+  K R++PY+     C IC
Sbjct:     1 MVCDKCEKKLSKVIVPDKWKDGARNVTEGGGRKINENKLLS-KKNRWSPYSTCTTKCMIC 59

Query:   140 RQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQS 177
             +Q+VHQ G  YC  CAY KG+CAMCGK++LD K YKQS
Sbjct:    60 KQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKMYKQS 96

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

WB|WBGene00044614 C36B1.14 [Caenorhabditis elegans (taxid:6239)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 43/100 (43%), Positives = 58/100 (58%)

Query:    80 MVCSKCEKKLGKVITPDNW--KSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCK 137
             MVC  CEKKL K++  D +  K  +RN   SG + +     L   + +      K   CK
Sbjct:     1 MVCGDCEKKLTKIVGVDPYRNKKVNRNADGSGPKTVTTKNRLIGVQKKATIVGAK---CK 57

Query:   138 ICRQKVHQVGSHYCQACAYKKGICAMCGKKLLDVKNYKQS 177
             +C+  +HQ GSHYC  CAY+KGICAMCGKK+ + K  +QS
Sbjct:    58 LCKMLIHQPGSHYCSTCAYQKGICAMCGKKIQNTKGLRQS 97

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0001703 "gastrulation with mouth forming first" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0032502 "developmental process" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

FB|FBgn0035679 CG10467 [Drosophila melanogaster (taxid:7227)]

 Score = 159 (61.0 bits), Expect = 4.6e-11, P = 4.6e-11
 Identities = 34/67 (50%), Positives = 42/67 (62%)

Query:     7 VVIMEDKFGE-CINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDV 65
             V + ED F    +N        ++RFTLTN   MSVQ+I  GATIT+IK PD  G +DDV
Sbjct:     2 VNVTEDVFANGAVNPFTKSKDTIKRFTLTNGAGMSVQLITRGATITSIKTPDASGQIDDV 61

Query:    66 VLGFDDM 72
              LGFDD+
Sbjct:    62 TLGFDDL 68

GO:0004034 "aldose 1-epimerase activity" evidence=ISS

GO:0019318 "hexose metabolic process" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IDA

FB|FBgn0030525 CG10996 [Drosophila melanogaster (taxid:7227)]

 Score = 159 (61.0 bits), Expect = 5.5e-11, P = 5.5e-11
 Identities = 32/66 (48%), Positives = 44/66 (66%)

Query:     7 VVIMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVV 66
             V ++ED FG   N    Q   +RR+T+TN+ R+SV +I  GATI +I+VPD    + DVV
Sbjct:     2 VKVVEDIFGIATNPFTKQAQVIRRYTMTNTNRLSVAIIQLGATIQSIQVPDAYHQLSDVV 61

Query:    67 LGFDDM 72
             LGFDD+
Sbjct:    62 LGFDDV 67

GO:0004034 "aldose 1-epimerase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0019318 "hexose metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5ZKB6	CRIPT_CHICK	No assigned EC number	0.71	0.5530	0.9801	yes	N/A
Q3ZC66	CRIPT_BOVIN	No assigned EC number	0.73	0.5530	0.9801	yes	N/A
O70333	CRIPT_MOUSE	No assigned EC number	0.73	0.5530	0.9801	yes	N/A
Q792Q4	CRIPT_RAT	No assigned EC number	0.73	0.5530	0.9801	yes	N/A
Q567Z6	CRIPT_DANRE	No assigned EC number	0.7	0.5530	0.9801	yes	N/A
Q9P021	CRIPT_HUMAN	No assigned EC number	0.73	0.5530	0.9801	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	179
pfam10235	89	pfam10235, Cript, Microtubule-associated protein C	4e-41
cd09019	326	cd09019, galactose_mutarotase_like, galactose muta	5e-18
PLN00194	337	PLN00194, PLN00194, aldose 1-epimerase; Provisiona	6e-10
pfam01263	301	pfam01263, Aldose_epim, Aldose 1-epimerase	8e-09
PRK11055	342	PRK11055, galM, galactose-1-epimerase; Provisional	9e-07
TIGR02636	336	TIGR02636, galM_Leloir, galactose mutarotase	5e-06
COG2017	308	COG2017, GalM, Galactose mutarotase and related en	6e-05

>gnl|CDD|220641 pfam10235, Cript, Microtubule-associated protein CRIPT

 Score =  133 bits (336), Expect = 4e-41
 Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 1/90 (1%)

Query: 90  GKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSH 149
            K+ TPD WK G+RNT   GGR+I +NK L+  KA+ NPY Q    CKIC+ KVHQ GS 
Sbjct: 1   TKLATPDVWKKGARNTATLGGRKINKNKLLS-KKAKRNPYAQYSSKCKICKTKVHQKGSK 59

Query: 150 YCQACAYKKGICAMCGKKLLDVKNYKQSAA 179
           YCQ CAYKKGICAMCGKK+LD KNYKQS+ 
Sbjct: 60  YCQRCAYKKGICAMCGKKILDTKNYKQSSV 89

The CRIPT protein is a cytoskeletal protein involved in microtubule production. The C-terminal domain is essential for binding to the PDZ3 domain of the SAP90 protein, one of a super-family of PDZ-containing proteins that play an important role in coupling the membrane ion channels with their signalling partners. SAP90 is concentrated in the post synaptic density of glutamatergic neurons. Length = 89

>gnl|CDD|185696 cd09019, galactose_mutarotase_like, galactose mutarotase_like

 Score = 79.1 bits (196), Expect = 5e-18
 Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 4/53 (7%)

Query: 30 RFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YF 78
           +TLTN   + V +++YGATI ++KVPDK G + DVVLGFDD+ + +    YF
Sbjct: 1  LYTLTNGNGLRVSILNYGATIQSLKVPDKNGKLRDVVLGFDDLEDYLKNSPYF 53

Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily. Length = 326

>gnl|CDD|215098 PLN00194, PLN00194, aldose 1-epimerase; Provisional

 Score = 56.6 bits (137), Expect = 6e-10
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 35 NSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE 74
           +  +SV++ +YGATIT++ +PDK G + DVVLGFD +  
Sbjct: 15 KNGNISVKLTNYGATITSLILPDKNGKLADVVLGFDSVEP 54

Length = 337

>gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase

 Score = 53.2 bits (128), Expect = 8e-09
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 29 RRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE 74
             TLTN   +S  +  YGAT+ ++KVPDK    ++V+LG DD   
Sbjct: 1  DLITLTNGNGLSATISLYGATLLSLKVPDK---GEEVLLGSDDADG 43

Length = 301

>gnl|CDD|182931 PRK11055, galM, galactose-1-epimerase; Provisional

 Score = 47.2 bits (113), Expect = 9e-07
 Identities = 18/49 (36%), Positives = 28/49 (57%)

Query: 26 LPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE 74
           P R  TL N+  M V ++D+GAT  + +VP   G+V +V+LG     +
Sbjct: 7  QPYRLLTLRNNAGMVVTLMDWGATWLSCRVPLSDGSVREVLLGCASPED 55

Length = 342

>gnl|CDD|233958 TIGR02636, galM_Leloir, galactose mutarotase

 Score = 45.0 bits (107), Expect = 5e-06
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 26 LPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE 74
           P +  TLTN   M++  +D GAT  + +VP   G + +V+LGF    E
Sbjct: 2  QPAQLITLTNKNGMTISFMDIGATWLSCQVP-LAGELREVLLGFASAEE 49

Members of this protein family act as galactose mutarotase (D-galactose 1-epimerase) and participate in the Leloir pathway for galactose/glucose interconversion. All members of the seed alignment for this model are found in gene clusters with other enzymes of the Leloir pathway. This enzyme family belongs to the aldose 1-epimerase family, described by Pfam model pfam01263. However, the enzyme described as aldose 1-epimerase itself (EC 5.1.3.3) is called broadly specific for D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose. The restricted genome context for genes in this family suggests members should act primarily on D-galactose. Length = 336

>gnl|CDD|224928 COG2017, GalM, Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism]

 Score = 42.0 bits (99), Expect = 6e-05
 Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 5/48 (10%)

Query: 27 PVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE 74
          PVR  TL N   M V V D+GAT+T+++V     N  +++LGFDD   
Sbjct: 11 PVRLLTLGNGGGMVVTVPDWGATLTSLRV-----NGRNLLLGFDDAES 53

Length = 308

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	179
KOG3476|consensus	100		100.0
PF10235	90	Cript: Microtubule-associated protein CRIPT; Inter	100.0
KOG1604|consensus	353		99.77
PRK11055	342	galM galactose-1-epimerase; Provisional	99.69
PTZ00485	376	aldolase 1-epimerase; Provisional	99.66
TIGR02636	335	galM_Leloir galactose mutarotase. Members of this	99.61
PLN00194	337	aldose 1-epimerase; Provisional	99.38
cd09019	326	galactose_mutarotase_like galactose mutarotase_lik	99.29
COG2017	308	GalM Galactose mutarotase and related enzymes [Car	98.97
PRK15172	300	putative aldose-1-epimerase; Provisional	98.33
PF01263	300	Aldose_epim: Aldose 1-epimerase; InterPro: IPR0081	98.01
cd09022	284	Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to	97.76
cd09024	288	Aldose_epim_lacX Aldose 1-epimerase, similar to La	95.7
cd01081	284	Aldose_epim aldose 1-epimerase superfamily. Aldose	95.38
PF10217	92	DUF2039: Uncharacterized conserved protein (DUF203	95.25
COG5152	259	Uncharacterized conserved protein, contains RING a	93.12
KOG3241|consensus	227		92.28
PF12773	50	DZR: Double zinc ribbon	89.14

>KOG3476|consensus

Probab=100.00  E-value=4.7e-49  Score=286.31  Aligned_cols=100  Identities=68%  Similarity=1.234  Sum_probs=97.5

Q ss_pred             hccccccceecceeccCccCCCCCccccCCceecccceeeeecccccCCCcccCcccchhhcccccCCCccCcccccccC
Q psy11903         80 MVCSKCEKKLGKVITPDNWKSGSRNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKG  159 (179)
Q Consensus        80 mvc~kc~~klg~va~pd~~k~~~~n~l~gG~~gi~~nk~l~~~k~~~~p~~~~~~~c~~ck~~~~~~~~~yc~~cay~~g  159 (179)
                      |||++||++|+++++||||+++.||+..+|++.|++||.|.+.|+||+||+..+.+|+|||+.|||+|+||||.|||+||
T Consensus         1 MVC~kCEkKLskvi~pd~wr~garn~~~sGgrkinenkaL~s~k~r~~p~gt~~~kC~iCk~~vHQ~GshYC~tCAY~Kg   80 (100)
T KOG3476|consen    1 MVCEKCEKKLSKVIGPDPWRDGARNTTESGGRKINENKALISKKKRATPYGTALAKCRICKQLVHQPGSHYCQTCAYKKG   80 (100)
T ss_pred             CchhHHHHHhccccccCcccccccccCCCCCeecchhhhhhhhhhhcCccccccchhHHHHHHhcCCcchhHhHhhhhhh
Confidence            89999999999999999999999999999999999999777778999999999999999999999999999999999999


Q ss_pred             cccccCcccccccccccccC
Q psy11903        160 ICAMCGKKLLDVKNYKQSAA  179 (179)
Q Consensus       160 ~c~mcgk~~~d~~~~~~s~~  179 (179)
                      |||||||+|+||++|+||++
T Consensus        81 iCAMCGKki~nTK~ykQsst  100 (100)
T KOG3476|consen   81 ICAMCGKKILNTKNYKQSST  100 (100)
T ss_pred             HHHHhhhHhhccccccccCC
Confidence            99999999999999999986

>PF10235 Cript: Microtubule-associated protein CRIPT; InterPro: IPR019367 The CRIPT protein is a cytoskeletal protein involved in microtubule production

Probab=100.00  E-value=4.9e-43  Score=257.09  Aligned_cols=88  Identities=66%  Similarity=1.194  Sum_probs=83.5

Q ss_pred             cceeccCccCCCC--CccccCCceecccceeeeecccccCCCcccCcccchhhcccccCCCccCcccccccCcccccCcc
Q psy11903         90 GKVITPDNWKSGS--RNTIESGGRRIGENKALTASKARFNPYTQKFESCKICRQKVHQVGSHYCQACAYKKGICAMCGKK  167 (179)
Q Consensus        90 g~va~pd~~k~~~--~n~l~gG~~gi~~nk~l~~~k~~~~p~~~~~~~c~~ck~~~~~~~~~yc~~cay~~g~c~mcgk~  167 (179)
                      ++||+||||++++  +|+..+|+++|+|||||+++ ++ |||++++++|++||++|||+|+||||.|||+|||||||||+
T Consensus         1 tklatPd~~k~~~~~~~~~~~g~r~i~eNKlLs~~-~~-nPy~~~~~~C~~CK~~v~q~g~~YCq~CAYkkGiCamCGKk   78 (90)
T PF10235_consen    1 TKLATPDPWKKGAMYRNTAESGGRKIGENKLLSKK-KK-NPYAPYSSKCKICKTKVHQPGAKYCQTCAYKKGICAMCGKK   78 (90)
T ss_pred             CccccCCccccCcccccccCCCCccccceeeeccc-cc-CcccccCccccccccccccCCCccChhhhcccCcccccCCe
Confidence            4689999999999  99999999999999999873 44 99999999999999999999999999999999999999999


Q ss_pred             cccccccccccC
Q psy11903        168 LLDVKNYKQSAA  179 (179)
Q Consensus       168 ~~d~~~~~~s~~  179 (179)
                      |+||++|+||+|
T Consensus        79 i~dtk~ykqs~v   90 (90)
T PF10235_consen   79 ILDTKNYKQSSV   90 (90)
T ss_pred             ecccccccccCC
Confidence            999999999987

This C-terminal domain is essential for binding to the PDZ3 domain of the SAP90 protein, one of a super-family of PDZ-containing proteins that play an important role in coupling the membrane ion channels with their signalling partners [].

>KOG1604|consensus

Probab=99.77  E-value=9.1e-19  Score=154.27  Aligned_cols=107  Identities=36%  Similarity=0.575  Sum_probs=90.2

Q ss_pred             eeccccceeccCCCceecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh-----hhhhcccc
Q psy11903         10 MEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI-----YFIMVCSK   84 (179)
Q Consensus        10 ~~~~FG~~~~~~~G~~~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~-----~~gmvc~k   84 (179)
                      .+..|| -+++...+  .++.|||.|+.+|+|.|++|||+|+||.+||++|+..|||||||+++.|+     |||++.+|
T Consensus         5 ~~~~~~-~~~~~~~~--~~~~~tl~n~~~l~vti~~~GATi~sL~vpd~~gk~~DVVLGfd~v~gY~~~~~~yfGatvGR   81 (353)
T KOG1604|consen    5 VEDVFG-NSNTDQKQ--TIRVYTLGNGKGLQVTIINLGATITSLKVPDKSGKLDDVVLGFDDVDGYLKDDAAYFGATVGR   81 (353)
T ss_pred             cccccC-CCcccccC--ceEEEEecCCCeeEEEEeeCCcEEEEEEcCCcCCcccceEecccchhhhccCCcceecceehh
Confidence            345666 23333343  89999999998999999999999999999999999999999999999998     69999999


Q ss_pred             ccceecc--------eeccCccCCCCCccccCCceecccceeeee
Q psy11903         85 CEKKLGK--------VITPDNWKSGSRNTIESGGRRIGENKALTA  121 (179)
Q Consensus        85 c~~klg~--------va~pd~~k~~~~n~l~gG~~gi~~nk~l~~  121 (179)
                      .++||++        .++..+  |+++|++|||..||+.-...-.
T Consensus        82 vANRI~~G~F~ldgk~y~lt~--N~g~n~lHgg~~gf~~~~w~v~  124 (353)
T KOG1604|consen   82 VANRIAKGKFSLDGKPYKLTV--NNGKNTLHGGIKGFDKVIWEVV  124 (353)
T ss_pred             hhhhcccceEEECCceEEecc--cCCCccccCCcccccceEEEEE
Confidence            9999986        344443  4789999999999998887755

>PRK11055 galM galactose-1-epimerase; Provisional

Probab=99.69  E-value=6.5e-17  Score=143.16  Aligned_cols=88  Identities=26%  Similarity=0.443  Sum_probs=78.0

Q ss_pred             CCceecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhccccccceecc------
Q psy11903         22 NGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCSKCEKKLGK------   91 (179)
Q Consensus        22 ~G~~~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~kc~~klg~------   91 (179)
                      +|+  ++++|||+|++|++|+|++|||+|++|++||++|..+|||||||++++|+    ++|++.+++++||+.      
T Consensus         5 ~g~--~v~~~tl~n~~g~~v~i~~~GA~i~~l~vpd~~g~~~dvvlg~~~~~~y~~~~~~~Ga~iGr~anRI~~g~f~~~   82 (342)
T PRK11055          5 DGQ--PYRLLTLRNNAGMVVTLMDWGATWLSCRVPLSDGSVREVLLGCASPEDYPDQAAYLGASVGRYANRIANSRFTLD   82 (342)
T ss_pred             CCC--eEEEEEEECCCCeEEEEeCcCcEEEEEEeECCCCCEeeeEECCCCHHHHhhCCCccCceeCCcCCcccCCEEEEC
Confidence            666  89999999988999999999999999999999999999999999999998    799999999999964      


Q ss_pred             --eeccCccCCCCCccccCCceec
Q psy11903         92 --VITPDNWKSGSRNTIESGGRRI  113 (179)
Q Consensus        92 --va~pd~~k~~~~n~l~gG~~gi  113 (179)
                        .+++++ + .+.|+||||..|+
T Consensus        83 G~~y~L~~-N-~~~n~lHGg~~G~  104 (342)
T PRK11055         83 GETYQLSP-N-QGGNQLHGGPEGF  104 (342)
T ss_pred             CEEEEccc-C-CCCcccCCCCccc
Confidence              455554 4 4679999997665

>PTZ00485 aldolase 1-epimerase; Provisional

Probab=99.66  E-value=2.9e-16  Score=141.09  Aligned_cols=85  Identities=18%  Similarity=0.286  Sum_probs=72.7

Q ss_pred             cEEEEEEEcCCCeEEEEecCCcEEEEEEeeCC-CCcccceEeCcC-Cchhhh----hhhhccccccceecc--------e
Q psy11903         27 PVRRFTLTNSQRMSVQVIDYGATITTIKVPDK-RGNVDDVVLGFD-DMREEI----YFIMVCSKCEKKLGK--------V   92 (179)
Q Consensus        27 ~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr-~G~~~dVVLGfd-~~e~Y~----~~gmvc~kc~~klg~--------v   92 (179)
                      ..++|+|+|+ +|+|+|+||||+|++|++||+ +|.++||||||| ++++|+    ++|++.+|+++||..        .
T Consensus        12 ~~~~~~L~N~-~~~v~i~n~GA~i~si~v~~~~~g~~~dvvLG~d~~~~~Y~~~~~y~Ga~iGr~AnRI~~G~f~ldG~~   90 (376)
T PTZ00485         12 YDKLVWLETD-RLKVGLTNYAASVASIQVYHPADNKWIEVNCGYPKNPEEAYADPDYMGATVGRCAGRVAGGVFTLDGVK   90 (376)
T ss_pred             CCcEEEEEeC-CEEEEEECcCcEEEEEEEEcCCCCcEEeEEECCCCCHHHHhhCCCccCcEeCCCCCeEECCEEEECCEE
Confidence            3668999996 599999999999999999873 399999999997 699998    799999999999964        4


Q ss_pred             eccCccCCCCCccccCCceecc
Q psy11903         93 ITPDNWKSGSRNTIESGGRRIG  114 (179)
Q Consensus        93 a~pd~~k~~~~n~l~gG~~gi~  114 (179)
                      ++++.  |.+.|+||||..+|+
T Consensus        91 YqL~~--Neg~n~LHGG~~gf~  110 (376)
T PTZ00485         91 YYTQK--NRGENTCHCGDDAYH  110 (376)
T ss_pred             EEccC--CCCCcccCCCCCccc
Confidence            55553  456799999998887

>TIGR02636 galM_Leloir galactose mutarotase

Probab=99.61  E-value=2e-15  Score=132.88  Aligned_cols=85  Identities=25%  Similarity=0.421  Sum_probs=74.1

Q ss_pred             cEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhccccccceecc--------eec
Q psy11903         27 PVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCSKCEKKLGK--------VIT   94 (179)
Q Consensus        27 ~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~kc~~klg~--------va~   94 (179)
                      .+++|||+|++||+|+|++|||+|++|.+||++ ..+|||||||++++|+    ++|++.+++++||..        .++
T Consensus         3 ~v~~~~l~n~~g~~v~i~~~GA~i~~l~~pd~~-~~~~vvlg~~~~~~y~~~~~~~Ga~igp~anRI~~g~f~~~G~~y~   81 (335)
T TIGR02636         3 PAQLITLTNNNGMTISFMDIGATWLSCQVPLAG-ELREVLLGFASMEEYYKQDAYLGATVGRYANRIANGSFEIDGETYQ   81 (335)
T ss_pred             eeEEEEEECCCCcEEEEeCcCcEEEEEEeeCCC-CccceEECCCCHHHHhhCCCccCCCcCCCCceecCCEEEECCEEEE
Confidence            789999999889999999999999999999976 7789999999999998    789999999999963        455


Q ss_pred             cCccCCCCCccccCCceecc
Q psy11903         95 PDNWKSGSRNTIESGGRRIG  114 (179)
Q Consensus        95 pd~~k~~~~n~l~gG~~gi~  114 (179)
                      +++ | .+.|++|||..|++
T Consensus        82 L~~-N-~~~n~lHGg~~G~~   99 (335)
T TIGR02636        82 LSI-N-QGGNCLHGGPEGFD   99 (335)
T ss_pred             ecc-C-CCCcccCCCCcccc
Confidence            553 4 45799999986664

Members of this protein family act as galactose mutarotase (D-galactose 1-epimerase) and participate in the Leloir pathway for galactose/glucose interconversion. All members of the seed alignment for this model are found in gene clusters with other enzymes of the Leloir pathway. This enzyme family belongs to the aldose 1-epimerase family, described by pfam model pfam01263. However, the enzyme described as aldose 1-epimerase itself (EC 5.1.3.3) is called broadly specific for D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose. The restricted genome context for genes in this family suggests members should act primarily on D-galactose.

>PLN00194 aldose 1-epimerase; Provisional

Probab=99.38  E-value=1.6e-12  Score=114.71  Aligned_cols=88  Identities=28%  Similarity=0.531  Sum_probs=75.1

Q ss_pred             CCceecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhccccccceecc------
Q psy11903         22 NGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCSKCEKKLGK------   91 (179)
Q Consensus        22 ~G~~~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~kc~~klg~------   91 (179)
                      .|+  .+.+|+|+|+ .++|+|++|||+|++|.++|++|.++||||||++.++|+    ++|++.++.++||..      
T Consensus         5 ~~~--~~~~~~L~n~-~l~~~i~~~GA~l~s~~~~~~~g~~~~vvlg~~~~~~y~~~~~~~Ga~lgp~anRI~~g~~~~~   81 (337)
T PLN00194          5 AEE--KPGIYELKNG-NISVKLTNYGATITSLILPDKNGKLADVVLGFDSVEPYKNDSPYFGAIVGRVANRIKGAKFTLN   81 (337)
T ss_pred             CCC--eeEEEEEEeC-CEEEEEECCCcEEEEEEeECCCCCEeeeEECCCCHHHHhhCCCccCCeeCCCCCceeCCEEEEC
Confidence            455  8999999995 699999999999999999999999999999999999998    578999999999853      


Q ss_pred             --eeccCccCCCCCccccCCceecc
Q psy11903         92 --VITPDNWKSGSRNTIESGGRRIG  114 (179)
Q Consensus        92 --va~pd~~k~~~~n~l~gG~~gi~  114 (179)
                        .+..++  +.+.|.+|||..|+.
T Consensus        82 G~~y~l~~--N~~~~~lHGg~~G~~  104 (337)
T PLN00194         82 GVTYKLPP--NNGPNSLHGGPKGFS  104 (337)
T ss_pred             CEEEEecc--CCCCcccCCCCcccC
Confidence              444443  345799999987765

>cd09019 galactose_mutarotase_like galactose mutarotase_like

Probab=99.29  E-value=8.4e-12  Score=109.09  Aligned_cols=83  Identities=34%  Similarity=0.673  Sum_probs=70.3

Q ss_pred             EEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhccccccceecc--------eeccCc
Q psy11903         30 RFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCSKCEKKLGK--------VITPDN   97 (179)
Q Consensus        30 ~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~kc~~klg~--------va~pd~   97 (179)
                      +|+|+|+++++|+|+++||+|++|.+++++|..++|||||+++++|+    +++++.++.++||..        .++.++
T Consensus         1 ~~~l~n~~~~~~~i~~~GA~l~~l~~~~~~g~~~~~v~~~~~~~~~~~~~~~~g~~lgp~anRi~~g~~~~~G~~y~l~~   80 (326)
T cd09019           1 LYTLTNGNGLRVSILNYGATIQSLKVPDKNGKLRDVVLGFDDLEDYLKNSPYFGATVGRVANRIANGRFTLDGKTYQLEA   80 (326)
T ss_pred             CEEEECCCCcEEEEECcCcEEEEEEEECCCCCEeeeEECCCCHHHHhhCCCccCCcccCcCCeecCCEEEECCEEEEccC
Confidence            37899966899999999999999999998898899999999999998    578889999999863        455553


Q ss_pred             cCCCCCccccCCceecc
Q psy11903         98 WKSGSRNTIESGGRRIG  114 (179)
Q Consensus        98 ~k~~~~n~l~gG~~gi~  114 (179)
                       + .++|+||||..|+.
T Consensus        81 -N-e~~~~LHGg~~G~~   95 (326)
T cd09019          81 -N-EGPNHLHGGPKGFD   95 (326)
T ss_pred             -C-CCCcccCCCCcccc
Confidence             4 44899999986764

Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.

>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism]

Probab=98.97  E-value=1.9e-09  Score=94.23  Aligned_cols=90  Identities=32%  Similarity=0.539  Sum_probs=75.1

Q ss_pred             cccceeccCCCceecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhccccccce
Q psy11903         13 KFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCSKCEKK   88 (179)
Q Consensus        13 ~FG~~~~~~~G~~~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~kc~~k   88 (179)
                      .|+..+   +|.  .+..+++.|+.++.+.|.+|||+|++|++   +|  ++||||+++.++|.    +.+++.++.++|
T Consensus         2 ~~~~~~---~~~--~~~~i~~~~~~~~~~~~~~~GA~l~~l~~---~~--~~v~l~~~~~~~~~~~~~~~ga~l~p~anR   71 (308)
T COG2017           2 PFGAAP---DGQ--PVRLLTLGNGGGMVVTVPDWGATLTSLRV---NG--RNLLLGFDDAESYPATRGYGGAILGPYANR   71 (308)
T ss_pred             cccccc---CCC--ceEEEEEeCCCeEEEEEccCCcEEEEEEE---CC--ceEEeecCCHHHhccccccccceecCccCc
Confidence            355444   777  89999999988999999999999999999   45  79999999999998    356899999999


Q ss_pred             ecc--------eeccCccCCCCCccccCCceecc
Q psy11903         89 LGK--------VITPDNWKSGSRNTIESGGRRIG  114 (179)
Q Consensus        89 lg~--------va~pd~~k~~~~n~l~gG~~gi~  114 (179)
                      |..        .+++.+ ++ +.|++|||.+++.
T Consensus        72 I~~g~f~~~G~~y~L~~-N~-~~~~lHG~~~~~~  103 (308)
T COG2017          72 ISNGRFTLDGKTYQLPP-NE-GGNALHGGARDFD  103 (308)
T ss_pred             ccCCEEEECCEEEEeCC-CC-CCccccCCccCCC
Confidence            853        777775 55 7899999987653

>PRK15172 putative aldose-1-epimerase; Provisional

Probab=98.33  E-value=1.7e-06  Score=75.25  Aligned_cols=75  Identities=12%  Similarity=0.127  Sum_probs=58.2

Q ss_pred             EEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh--hhhhccccccceecc--------eeccCc
Q psy11903         28 VRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI--YFIMVCSKCEKKLGK--------VITPDN   97 (179)
Q Consensus        28 v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~--~~gmvc~kc~~klg~--------va~pd~   97 (179)
                      -..++|+|+ .++|+|++|||+|++|++.   |  .+||||++. ++|.  ++|.+-+++++||..        .+..++
T Consensus        10 ~~~~~l~~~-~~~v~i~~~Ga~i~~l~~~---~--~~vv~~~~~-~~~~~~~~g~~L~P~anRI~~g~f~~~G~~y~L~~   82 (300)
T PRK15172         10 GQTISLAAG-DYQATIVTVGAGLAELTFQ---G--RHLVIPHKP-EEMPLAHLGKVLIPWPNRIANGCYRYQGQEYQLPI   82 (300)
T ss_pred             cCEEEEeCC-CEEEEEecCCcEEEEEEEC---C--EEEEecCCc-cccCccccccEecccCCeecCCEEEECCEEEECCC
Confidence            346889985 7999999999999999983   4  489999975 6665  577888999999863        555554


Q ss_pred             cCCC-CCccccCCc
Q psy11903         98 WKSG-SRNTIESGG  110 (179)
Q Consensus        98 ~k~~-~~n~l~gG~  110 (179)
                       |++ ..|.+|||-
T Consensus        83 -N~~~~~~~lHG~~   95 (300)
T PRK15172         83 -NEHVSKAAIHGLL   95 (300)
T ss_pred             -CCCCCCcccCCCc
Confidence             432 478899974

>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5

Probab=98.01  E-value=1.7e-05  Score=67.07  Aligned_cols=80  Identities=19%  Similarity=0.141  Sum_probs=60.4

Q ss_pred             EEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhhhh---hhccccccceec--------ceeccCc
Q psy11903         29 RRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYF---IMVCSKCEKKLG--------KVITPDN   97 (179)
Q Consensus        29 ~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~~~---gmvc~kc~~klg--------~va~pd~   97 (179)
                      .+|+|+|+.++++.|..+||.|++|.+++ +  ..+|+.++++.++|...   +.+..+..+||.        +.+..+.
T Consensus         1 ~~itL~n~~~~~~~i~~~Ga~l~s~~~~~-~--~~~~l~~~~~~~~~~~~~~~~~~l~p~~~Ri~~g~~~~~g~~~~l~~   77 (300)
T PF01263_consen    1 DLITLENGNGLSAVIPEYGAELTSLQVKG-N--GREVLWQPDPADAYWSNSFGGPILFPWPNRIRNGRFTFDGKPYCLPW   77 (300)
T ss_dssp             EEEEEEETTSEEEEEETBTTEEEEEEETT-T--TEESB-B-STHHHHHHSTCTTCEECSCSSEEGGGEEEETTEEEEBSS
T ss_pred             CEEEEECCCceEEEEeccCcEEEEEEECC-C--CeEEecCCCChHHhcccccceeeeecccceEECCEEEECCEEEEeee
Confidence            36899997689999999999999999986 4  47999999998888864   567788888873        3444442


Q ss_pred             cCCCCCccccCCcee
Q psy11903         98 WKSGSRNTIESGGRR  112 (179)
Q Consensus        98 ~k~~~~n~l~gG~~g  112 (179)
                       +....|.+||.-+.
T Consensus        78 -~~~~~~~~HG~~~~   91 (300)
T PF01263_consen   78 -NGPYPNPIHGFARN   91 (300)
T ss_dssp             -SBTTTBEETBSGGG
T ss_pred             -ccCCCcCCCCCccc
Confidence             33278999997654

1.3.3 from EC) (mutarotase) is the enzyme responsible for the anomeric interconversion of D-glucose and other aldoses between their alpha- and beta-forms. The sequence of mutarotase from two bacteria, Acinetobacter calcoaceticus and Streptococcus thermophilus is available []. It has also been shown that, on the basis of extensive sequence similarities, a mutarotase domain seems to be present in the C-terminal half of the fungal GAL10 protein which encodes, in the N-terminal part, UDP-glucose 4-epimerase.; GO: 0016853 isomerase activity, 0005975 carbohydrate metabolic process; PDB: 1YGA_A 3DCD_A 2CIQ_A 2CIS_A 2CIR_A 2HTB_C 2HTA_B 3Q1N_A 1NSZ_B 1NSR_B ....

>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR

Probab=97.76  E-value=5.2e-05  Score=64.74  Aligned_cols=66  Identities=17%  Similarity=0.096  Sum_probs=50.5

Q ss_pred             EEEEecCCcEEEEEEeeCCCCcccceEeCcCCchh-hhhhhhccccccceecc--------eeccCccCCC-CCccccCC
Q psy11903         40 SVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE-EIYFIMVCSKCEKKLGK--------VITPDNWKSG-SRNTIESG  109 (179)
Q Consensus        40 ~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~-Y~~~gmvc~kc~~klg~--------va~pd~~k~~-~~n~l~gG  109 (179)
                      +|+|+++||+|++|.+   +|  ++||+|+++.+. -.+.|++..++++||..        .+++++ |++ +.|.+||+
T Consensus         2 ~v~i~~~Ga~l~~~~~---~g--~~il~~~~~~~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~~-N~~~~~~~~HG~   75 (284)
T cd09022           2 RAVVTEVGAGLRSLTV---GG--RDLVEPYPADEVPPGAAGQVLAPWPNRIADGRYTFDGVEHQLPI-TEPERGNAIHGL   75 (284)
T ss_pred             EEEEEecCcEEEEEEE---CC--EEEEecCCCccCCccccccEEeeeCCcccCCEEEECCEEEEccC-cCCCCCCCCcCC
Confidence            6899999999999988   45  699999998872 12467899999999863        455553 432 57999997


Q ss_pred             ce
Q psy11903        110 GR  111 (179)
Q Consensus       110 ~~  111 (179)
                      .+
T Consensus        76 ~~   77 (284)
T cd09022          76 VR   77 (284)
T ss_pred             ee
Confidence            64

Proteins similar to Escherichia coli YihR are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.

>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX

Probab=95.70  E-value=0.019  Score=49.29  Aligned_cols=55  Identities=22%  Similarity=0.154  Sum_probs=40.0

Q ss_pred             EEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhhhhhhccccccceec
Q psy11903         31 FTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYFIMVCSKCEKKLG   90 (179)
Q Consensus        31 ~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~~~gmvc~kc~~klg   90 (179)
                      |+|+|+ .++++|.++||+|+++++.+ +|  .+++..++ .+.|.....+|.+..+|+.
T Consensus         1 ~~l~n~-~~~a~v~~~Ga~l~s~~~~~-~g--~e~l~~~~-~~~~~~~~p~l~P~~gri~   55 (288)
T cd09024           1 ITLENE-FLTVTISEHGAELTSIKDKK-TG--REYLWQGD-PAYWGRHAPILFPIVGRLK   55 (288)
T ss_pred             CEEECC-cEEEEEeccCcEEEEEEeCC-CC--CEEEeCCC-hHHcCCCCCEEEeeccCCC
Confidence            578986 59999999999999999964 35  57887664 3334333367777777764

Proteins similar to Lactococcus lactis lacX are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.

>cd01081 Aldose_epim aldose 1-epimerase superfamily

Probab=95.38  E-value=0.037  Score=45.96  Aligned_cols=65  Identities=17%  Similarity=0.122  Sum_probs=46.3

Q ss_pred             EEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhh-----hhhhhccccccceecc--------eeccCccCCCCCccc
Q psy11903         40 SVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREE-----IYFIMVCSKCEKKLGK--------VITPDNWKSGSRNTI  106 (179)
Q Consensus        40 ~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y-----~~~gmvc~kc~~klg~--------va~pd~~k~~~~n~l  106 (179)
                      +|+|+++||.|.++++++    ..+|+++++....|     .+.+.++....+|+..        .+.+.  .++..+.+
T Consensus         2 ~~~i~~~Ga~i~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~l~P~~gri~~g~~~~~g~~~~~~--~~~~~~~l   75 (284)
T cd01081           2 VAVIAPRGANIISLKVKG----DVDLLWGYPDAEEYPLAPTGGGGAILFPFANRISDGRYTFDGKQYPLN--EDEGGNAI   75 (284)
T ss_pred             EEEEeCcCcEEEEEEcCC----CceEEecCCChhhhcccCCCCcceEecCcCCcccCCEEeECCEEecCC--CCCCCccc
Confidence            689999999999998863    36999999998876     2455777777777743        11121  23456888


Q ss_pred             cCCc
Q psy11903        107 ESGG  110 (179)
Q Consensus       107 ~gG~  110 (179)
                      ||+-
T Consensus        76 HG~~   79 (284)
T cd01081          76 HGFV   79 (284)
T ss_pred             cCCe
Confidence            9864

Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism; they catalyze the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate and the histidine as the active site acid to protonate the C-5 ring oxygen.

>PF10217 DUF2039: Uncharacterized conserved protein (DUF2039); InterPro: IPR019351 This entry is a region of approximately 100 residues containing three pairs of cysteine residues

Probab=95.25  E-value=0.0023  Score=47.57  Aligned_cols=41  Identities=37%  Similarity=0.808  Sum_probs=33.4

Q ss_pred             cCCCcccCcccchhhc-ccccCCCccCcccccccCcccccCcc
Q psy11903        126 FNPYTQKFESCKICRQ-KVHQVGSHYCQACAYKKGICAMCGKK  167 (179)
Q Consensus       126 ~~p~~~~~~~c~~ck~-~~~~~~~~yc~~cay~~g~c~mcgk~  167 (179)
                      |-|..+ .++|-.|.+ +|.+.=|..|+.||-..++||.||++
T Consensus        49 YKpLt~-p~kC~~C~qktVk~AYh~iC~~Ca~~~~vCaKC~k~   90 (92)
T PF10217_consen   49 YKPLTQ-PKKCNKCQQKTVKHAYHVICDPCAKELKVCAKCGKP   90 (92)
T ss_pred             cccCCC-CccccccccchHHHHHHHHHHHHHHhhccCcccCCC
Confidence            344443 469999997 66776788999999999999999986

The region is conserved from plants to humans but its function is unknown.

>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]

Probab=93.12  E-value=0.023  Score=48.13  Aligned_cols=34  Identities=41%  Similarity=1.117  Sum_probs=28.0

Q ss_pred             ccchhhccc-----ccCCCccCcccc---cccC-cccccCccc
Q psy11903        135 SCKICRQKV-----HQVGSHYCQACA---YKKG-ICAMCGKKL  168 (179)
Q Consensus       135 ~c~~ck~~~-----~~~~~~yc~~ca---y~~g-~c~mcgk~~  168 (179)
                      .|.|||...     ..-||++|..||   |+|| .|-.|||..
T Consensus       198 ~C~iCKkdy~spvvt~CGH~FC~~Cai~~y~kg~~C~~Cgk~t  240 (259)
T COG5152         198 LCGICKKDYESPVVTECGHSFCSLCAIRKYQKGDECGVCGKAT  240 (259)
T ss_pred             eehhchhhccchhhhhcchhHHHHHHHHHhccCCcceecchhh
Confidence            899999753     344899999999   6776 799999864

>KOG3241|consensus

Probab=92.28  E-value=0.0096  Score=49.51  Aligned_cols=46  Identities=28%  Similarity=0.755  Sum_probs=37.3

Q ss_pred             ccCCCcccCcccchhhc-ccccCCCccCcccccccCcccccCcccccc
Q psy11903        125 RFNPYTQKFESCKICRQ-KVHQVGSHYCQACAYKKGICAMCGKKLLDV  171 (179)
Q Consensus       125 ~~~p~~~~~~~c~~ck~-~~~~~~~~yc~~cay~~g~c~mcgk~~~d~  171 (179)
                      +|.|.+. ..+|..|++ .|.|.-|+.|..||-+...||-|+|.+.++
T Consensus        60 KYKpLt~-akkC~kC~~r~Vk~aYH~~Cr~CA~e~~vCAKC~ks~~~i  106 (227)
T KOG3241|consen   60 KYKPLTE-AKKCQKCTKRNVKQAYHKLCRGCAKEQKVCAKCCKSVDQI  106 (227)
T ss_pred             cccccch-hHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhccHHHh
Confidence            4556554 469999987 778888899999999999999999976543

>PF12773 DZR: Double zinc ribbon

Probab=89.14  E-value=0.26  Score=31.53  Aligned_cols=34  Identities=24%  Similarity=0.646  Sum_probs=20.3

Q ss_pred             cchhhcccccCCCccCcccccccC-------cccccCccccc
Q psy11903        136 CKICRQKVHQVGSHYCQACAYKKG-------ICAMCGKKLLD  170 (179)
Q Consensus       136 c~~ck~~~~~~~~~yc~~cay~~g-------~c~mcgk~~~d  170 (179)
                      |..|.+.+.. ++.||..|-.+-.       +|.-||..+..
T Consensus         1 Cp~Cg~~~~~-~~~fC~~CG~~l~~~~~~~~~C~~Cg~~~~~   41 (50)
T PF12773_consen    1 CPHCGTPNPD-DAKFCPHCGTPLPPPDQSKKICPNCGAENPP   41 (50)
T ss_pred             CCCcCCcCCc-cccCChhhcCChhhccCCCCCCcCCcCCCcC
Confidence            4556666655 5666666655444       57777766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	179
1snz_A	344	Crystal Structure Of Apo Human Galactose Mutarotase		7e-05
1lur_A	339	Crystal Structure Of The GalmALDOSE EPIMERASE HOMOL		3e-04

>pdb|1SNZ|A Chain A, Crystal Structure Of Apo Human Galactose Mutarotase Length = 344

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 28 VRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDD----MREEIYFIMVCS 83
          V +F L  S  + V +I +G TIT ++V D++G   DVVLGF +    ++++ YF  V  
Sbjct: 21 VEKFQL-QSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIG 79
Query: 84 KCEKKLGK 91
          +   ++ K
Sbjct: 80 RVANRIAK 87

>pdb|1LUR|A Chain A, Crystal Structure Of The GalmALDOSE EPIMERASE HOMOLOGUE From C. Elegans, Northeast Structural Genomics Target Wr66 Length = 339

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 33 LTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYFIMVCSKCEKKLGKV 92
          + N Q ++  ++ +GAT+  +  PDK G   D+VLGFD + E   F    +   K +G+V
Sbjct: 17 IANKQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDE---FEKDAASIGKTVGRV 73

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	179
1lur_A	339	Aldose 1-epimerase; vitamin B12, methyltransferase	3e-20
1snz_A	344	Aldose 1-epimerase; mutarotase, galactosemia, isom	3e-19
3imh_A	338	Galactose-1-epimerase; structural genomics, PSI-2,	2e-16
1yga_A	342	Hypothetical 37.9 kDa protein in BIO3-HXT17 interg	3e-16
1nsx_A	347	Galactose mutarotase; epimerase, galactose metabol	1e-13

>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Length = 339

 Score = 84.9 bits (211), Expect = 3e-20
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 20 ESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE 74
            +          + N Q ++  ++ +GAT+  +  PDK G   D+VLGFD + E
Sbjct: 6  HHHSM--ASGFIEIANKQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDE 58

>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Length = 344

 Score = 82.2 bits (204), Expect = 3e-19
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)

Query: 9  IMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLG 68
          +    FGE  +   G    V +F L +   + V +I +G TIT ++V D++G   DVVLG
Sbjct: 6  VTRAVFGELPS--GGG--TVEKFQLQSDL-LRVDIISWGCTITALEVKDRQGRASDVVLG 60

Query: 69 FDDMRE 74
          F ++  
Sbjct: 61 FAELEG 66

>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Length = 338

 Score = 74.1 bits (183), Expect = 2e-16
 Identities = 12/66 (18%), Positives = 31/66 (46%), Gaps = 8/66 (12%)

Query: 9  IMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLG 68
           ++  F +     + +   +   TL N   M+V+V++YGAT+  + +  +     +++L 
Sbjct: 2  SLKTNFVK-YERKDNK--DLCEITLENDAGMAVKVLNYGATLEKVLLDGE-----NMILS 53

Query: 69 FDDMRE 74
           +   +
Sbjct: 54 LNSPED 59

>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Length = 342

 Score = 73.8 bits (182), Expect = 3e-16
 Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 27 PVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE 74
               T+ + ++    +   GAT+  +KV  +      VV G+ ++++
Sbjct: 9  KYGVITIGDEKKFQATIAPLGATLVDLKVNGQ-----SVVQGYSNVQD 51

>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Length = 347

 Score = 66.8 bits (164), Expect = 1e-13
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 27 PVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE 74
               +LTN   +++   + GA I      D + +   ++LGFD  +E
Sbjct: 11 GSDLISLTNKAGVTISFTNLGARIV-----DWQKDGKHLILGFDSAKE 53

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	179
1snz_A	344	Aldose 1-epimerase; mutarotase, galactosemia, isom	99.54
3imh_A	338	Galactose-1-epimerase; structural genomics, PSI-2,	99.53
1lur_A	339	Aldose 1-epimerase; vitamin B12, methyltransferase	99.36
1nsx_A	347	Galactose mutarotase; epimerase, galactose metabol	99.26
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.07
1yga_A	342	Hypothetical 37.9 kDa protein in BIO3-HXT17 interg	98.96
3os7_A	341	Galactose mutarotase-like protein; structural geno	98.41
3mwx_A	326	Aldose 1-epimerase; structural genomics, joint cen	98.3
3nre_A	291	Aldose 1-epimerase; structural genomics, joint cen	97.93
3q1n_A	294	Galactose mutarotase related enzyme; structural ge	97.51
2hta_A	309	Putative enzyme related to aldose 1-epimerase; car	97.0
3dcd_A	307	Galactose mutarotase related enzyme; Q5FKD7 LAR33	96.93
2cir_A	297	Hexose-6-phosphate mutarotase; hypothetical protei	96.93
3k25_A	289	SLR1438 protein; structural genomics, PSI-2, prote	96.38
1m3v_A	122	FLIN4, fusion of the LIM interacting domain of LDB	87.87
2ecy_A	66	TNF receptor-associated factor 3; metal binding pr	86.2
2egp_A	79	Tripartite motif-containing protein 34; ZF-C3HC4 d	85.42
2ecv_A	85	Tripartite motif-containing protein 5; metal bindi	84.93
1g25_A	65	CDK-activating kinase assembly factor MAT1; ring f	82.74
2ecg_A	75	Baculoviral IAP repeat-containing protein 4; BIRC4	82.61
2ecw_A	85	Tripartite motif-containing protein 30; metal bind	82.31
2jne_A	101	Hypothetical protein YFGJ; zinc fingers, two zinc,	82.22
4ic3_A	74	E3 ubiquitin-protein ligase XIAP; ring domain, zin	80.9
1chc_A	68	Equine herpes virus-1 ring domain; viral protein;	80.74

>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*

Probab=99.54  E-value=1.4e-14  Score=125.92  Aligned_cols=99  Identities=29%  Similarity=0.544  Sum_probs=84.8

Q ss_pred             eeeeccccceeccCCC-ceecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhcc
Q psy11903          8 VIMEDKFGECINESNG-QVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVC   82 (179)
Q Consensus         8 ~i~~~~FG~~~~~~~G-~~~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc   82 (179)
                      .|+++.||+++   +| +  .+..|+|+|+ +++|+|++|||+|++|.++|++|..++|||||+++++|.    ++|+++
T Consensus         5 ~~~~~~~g~~~---~g~~--~~~~~~L~n~-~~~~~i~~~GA~l~s~~~~~~~G~~~~vv~g~~~~~~y~~~~~~~G~~l   78 (344)
T 1snz_A            5 SVTRAVFGELP---SGGG--TVEKFQLQSD-LLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVI   78 (344)
T ss_dssp             EEEEEEEEEET---TTTE--EEEEEEEECS-SCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTTCEE
T ss_pred             eeEeeeeeecc---CCCc--EEEEEEEEcC-CEEEEEecCCcEEEEEEecCCCCCEeeEEECCCChHHHhhCCCceeeEe
Confidence            56677899886   88 7  8999999996 999999999999999999999998889999999999997    578999


Q ss_pred             ccccceecc--------eeccCccCCCCCccccCCceecc
Q psy11903         83 SKCEKKLGK--------VITPDNWKSGSRNTIESGGRRIG  114 (179)
Q Consensus        83 ~kc~~klg~--------va~pd~~k~~~~n~l~gG~~gi~  114 (179)
                      +++++||+.        .+++++ + .+.|.+|||.+|+.
T Consensus        79 ~p~~nRi~~g~f~~~G~~y~L~~-N-~~~~~lHG~~~g~~  116 (344)
T 1snz_A           79 GRVANRIAKGTFKVDGKEYHLAI-N-KEPNSLHGGVRGFD  116 (344)
T ss_dssp             CSBCSEEGGGEEEETTEEEECCC-T-BTTBEETTSSSCGG
T ss_pred             cCcCCcccCCEEEECCEEEECCC-C-CCCcccCCCccccc
Confidence            999999963        455553 4 45799999987663

>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}

Probab=99.53  E-value=2e-14  Score=125.97  Aligned_cols=92  Identities=16%  Similarity=0.268  Sum_probs=78.5

Q ss_pred             eeeeccccceeccCCCceecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhccc
Q psy11903          8 VIMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCS   83 (179)
Q Consensus         8 ~i~~~~FG~~~~~~~G~~~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~   83 (179)
                      .|+++.||++    +|+  ++++|||+|+.|++|+|++|||+|++|.++|     +||||||+++++|+    ++|++.+
T Consensus         4 ~~~~~~fg~~----~g~--~v~~~tL~n~~g~~v~i~~~GA~l~sl~~~~-----~dvvlg~~~~~~y~~~~~~~G~~lg   72 (338)
T 3imh_A            4 KTNFVKYERK----DNK--DLCEITLENDAGMAVKVLNYGATLEKVLLDG-----ENMILSLNSPEDYSKERNFLGGTVG   72 (338)
T ss_dssp             EEEEEEEEEE----TTE--EEEEEEEECSSSEEEEEETBTTEEEEEEETT-----EECBCCCSSGGGGGTSCCCTTCEEC
T ss_pred             ccEEeecccc----CCe--EEEEEEEECCCcEEEEEecCCcEEEEEEECC-----EEEEecCCChHHhccCCCeEeeEEE
Confidence            4677899986    787  8999999997789999999999999999985     79999999999997    5789999


Q ss_pred             cccceecc--------eeccCccCCCCCccccCCceec
Q psy11903         84 KCEKKLGK--------VITPDNWKSGSRNTIESGGRRI  113 (179)
Q Consensus        84 kc~~klg~--------va~pd~~k~~~~n~l~gG~~gi  113 (179)
                      ++++||+.        .+++++ | .+.|+||||. |+
T Consensus        73 p~anRI~~g~f~~~G~~y~L~~-N-~g~n~LHGg~-g~  107 (338)
T 3imh_A           73 RIAGRVRAGQWKHGNEIHQLPL-N-DGDNHIHGGI-GT  107 (338)
T ss_dssp             SBCSEEGGGEEEETTEEEECCC-C-BTTBEETTSS-CG
T ss_pred             eeCCEecCCEEEECCEEEECCC-C-CCCcCCCCCC-Cc
Confidence            99999964        555553 4 4689999997 54

>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4

Probab=99.36  E-value=8e-13  Score=114.82  Aligned_cols=84  Identities=21%  Similarity=0.343  Sum_probs=71.5

Q ss_pred             cEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhccccccceecc--------eec
Q psy11903         27 PVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCSKCEKKLGK--------VIT   94 (179)
Q Consensus        27 ~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~kc~~klg~--------va~   94 (179)
                      .+.+|+| ++++++|+|++|||+|++|++||++|..+|||||||++++|.    ++|++.+++++||+.        .++
T Consensus        12 ~~~~~~L-~~~~~~~~i~~~GA~l~sl~~~d~~G~~~dvvl~~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~~y~   90 (339)
T 1lur_A           12 SGFIEIA-NKQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQYT   90 (339)
T ss_dssp             CCCEEEE-CSSSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHHCSSCTTCEECSBCSEEGGGEEEETTEEEE
T ss_pred             eeEEEEE-eCCCEEEEEecCCcEEEEEEEECCCCCEeEEEEcCCChHHhccCCCccccEecCcCCeecCCEEEECCEEEE
Confidence            6888999 456899999999999999999999998889999999999987    478999999999964        444


Q ss_pred             cCccCCCCCccccCCceec
Q psy11903         95 PDNWKSGSRNTIESGGRRI  113 (179)
Q Consensus        95 pd~~k~~~~n~l~gG~~gi  113 (179)
                      +++ + .+.|.+|||.+|+
T Consensus        91 L~~-N-~~~n~lHGg~~g~  107 (339)
T 1lur_A           91 MTP-N-NGPHYLHGGPNGL  107 (339)
T ss_dssp             CCC-S-BTTBEETTCTTSG
T ss_pred             CCC-C-CCCcccCCCCccc
Confidence            543 4 4679999998765

>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*

Probab=99.26  E-value=8.4e-12  Score=108.90  Aligned_cols=88  Identities=20%  Similarity=0.318  Sum_probs=71.3

Q ss_pred             eeeccccceeccCCCceecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhhh----hhhcccc
Q psy11903          9 IMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIY----FIMVCSK   84 (179)
Q Consensus         9 i~~~~FG~~~~~~~G~~~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~~----~gmvc~k   84 (179)
                      |+++.||+          .+..|+|+|+++++|+|++|||+|++|. .  +|.  +|||||+++++|..    +|++.++
T Consensus         3 ~~~~~fg~----------~~~~~tL~n~~~~~v~i~~~GA~l~sl~-~--~G~--~vvlg~~~~~~y~~~~~~~G~~lgp   67 (347)
T 1nsx_A            3 IKIRDFGL----------GSDLISLTNKAGVTISFTNLGARIVDWQ-K--DGK--HLILGFDSAKEYLEKDAYPGATVGP   67 (347)
T ss_dssp             EEEEEEET----------TEEEEEEECTTSCEEEEETBTTEEEEEE-E--TTE--ESBCCCSSHHHHHHTCSCTTCEECS
T ss_pred             eeehhcCc----------eeEEEEEECCCceEEEEEccCcEEEEEE-E--CCe--EEEEeCCCHHHHhhCCCeEeeEEcc
Confidence            44567874          3889999997689999999999999998 3  574  49999999999974    8999999


Q ss_pred             ccceecc--------eeccCccCCCCCccccCCceec
Q psy11903         85 CEKKLGK--------VITPDNWKSGSRNTIESGGRRI  113 (179)
Q Consensus        85 c~~klg~--------va~pd~~k~~~~n~l~gG~~gi  113 (179)
                      +++||+.        .+++++ |+ +.|++|||..|+
T Consensus        68 ~anRI~~g~f~~~G~~y~L~~-N~-~~n~lHGg~~g~  102 (347)
T 1nsx_A           68 TAGRIKDGLVKISGKDYILNQ-NE-GPQTLHGGEESI  102 (347)
T ss_dssp             BCSEEGGGEEEETTEEEECCC-CB-TTBEETTSTTCG
T ss_pred             cCCcccCCEEEECCEEEEccC-CC-CCcccCCCCccc
Confidence            9999964        455553 44 689999997554

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.07  E-value=1.1e-10  Score=108.34  Aligned_cols=91  Identities=19%  Similarity=0.234  Sum_probs=74.2

Q ss_pred             ccccceeccCCCceecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhhh-----hhhcccccc
Q psy11903         12 DKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIY-----FIMVCSKCE   86 (179)
Q Consensus        12 ~~FG~~~~~~~G~~~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~~-----~gmvc~kc~   86 (179)
                      ..|++.+   .+.  ++..|+|+|+++++|+|++|||+|++|.++   |  .||||||++.++|..     +|++.++++
T Consensus       362 ~~f~~~~---~~~--~~~~~~l~n~~~~~~~i~~~Ga~l~s~~~~---g--~~~v~~~~~~~~y~~~~~~~~g~~l~~~~  431 (699)
T 1z45_A          362 ARFSAED---MRY--DARFVTIGAGTRFQATFANLGASIVDLKVN---G--QSVVLGYENEEGYLNPDSAYIGATIGRYA  431 (699)
T ss_dssp             EEESSST---TCT--TSEEEEESTTSSEEEEEESBTTCEEEEEET---T--EECBCCCSSHHHHTCTTCCCTTCEECSBC
T ss_pred             eccCCCC---CCc--ceEEEEEECCCceEEEEEccCeEEEEEeec---C--ceEEECCCCHHHHhhcCCCccccccCccc
Confidence            4677543   454  899999999658999999999999999984   5  499999999999983     889999999


Q ss_pred             ceecc--------eeccCccCCCCCccccCCceecc
Q psy11903         87 KKLGK--------VITPDNWKSGSRNTIESGGRRIG  114 (179)
Q Consensus        87 ~klg~--------va~pd~~k~~~~n~l~gG~~gi~  114 (179)
                      +||+.        .+++++  |.+.|++|||.+|++
T Consensus       432 nRi~~g~f~~~G~~y~l~~--n~~~~~lHG~~~g~~  465 (699)
T 1z45_A          432 NRISKGKFSLCNKDYQLTV--NNGVNANHSSIGSFH  465 (699)
T ss_dssp             SEEGGGEEEETTEEEECCC--CBTTBEETTGGGCGG
T ss_pred             CeecCcEEEECCEEEEccC--CCCCcccCCCccccc
Confidence            99964        455553  357899999987664

>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}

Probab=98.96  E-value=7.1e-10  Score=95.74  Aligned_cols=80  Identities=18%  Similarity=0.302  Sum_probs=66.5

Q ss_pred             cEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhccccccceecc--------eec
Q psy11903         27 PVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCSKCEKKLGK--------VIT   94 (179)
Q Consensus        27 ~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~kc~~klg~--------va~   94 (179)
                      .+..|+|+|+++++|+|++|||+|++|.++   |  ++|||||++.++|.    ++|++..++++||+.        .++
T Consensus         9 ~~~~~~l~n~~~~~~~i~~~GA~l~s~~~~---g--~~vl~~~~~~~~y~~~~~~~G~~l~p~~nRi~~g~f~~~G~~y~   83 (342)
T 1yga_A            9 KYGVITIGDEKKFQATIAPLGATLVDLKVN---G--QSVVQGYSNVQDYLTDGNMMGATVGRYANRIAKGVFSLDDGPHK   83 (342)
T ss_dssp             TTCCEEEEETTTEEEEEETBTTEEEEEEET---T--EECBCCCSSGGGGTTCSSCTTCEECSBCSEEGGGEEEETTEEEE
T ss_pred             eEEEEEEECCCCEEEEEECCCCEEEEEEEC---C--eeEEecCCChHHhccCCCeEccEECCCCCceeCCEEEECCEEEE
Confidence            788999999668999999999999999984   5  69999999999996    578888899999853        455


Q ss_pred             cCccCCCCCccccCCceec
Q psy11903         95 PDNWKSGSRNTIESGGRRI  113 (179)
Q Consensus        95 pd~~k~~~~n~l~gG~~gi  113 (179)
                      +++ + .+.|.+|||.+|+
T Consensus        84 l~~-n-~~~~~lHG~~~g~  100 (342)
T 1yga_A           84 LTV-N-NCGNTNHSSISSL  100 (342)
T ss_dssp             CCC-C-BTTBEETTGGGCG
T ss_pred             cCC-C-CCCcccCCCcccc
Confidence            553 3 4679999997655

>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}

Probab=98.41  E-value=8e-07  Score=76.91  Aligned_cols=80  Identities=9%  Similarity=0.096  Sum_probs=61.0

Q ss_pred             cEEEEEEEcCCCeEEEEe-cCCcEEEEEEeeCCCCcccceEeCcCC---chhhh----hhhhccccccceecc-------
Q psy11903         27 PVRRFTLTNSQRMSVQVI-DYGATITTIKVPDKRGNVDDVVLGFDD---MREEI----YFIMVCSKCEKKLGK-------   91 (179)
Q Consensus        27 ~v~~~tL~n~~gl~v~vl-nyGAtI~sl~vpdr~G~~~dVVLGfd~---~e~Y~----~~gmvc~kc~~klg~-------   91 (179)
                      ....|+|+|+ +++|+|+ ++||+|++|++++ +|  ++||+++++   +++|.    ++|++..+.++||+.       
T Consensus        17 g~~~~~L~n~-~~~~~i~p~~Ga~l~s~~~~~-~g--~~~l~~~~~~~~~~~y~~~~~~~G~pv~~p~nRi~~g~f~~~G   92 (341)
T 3os7_A           17 EHKCIRFAAG-GYEALIIPDVGGNVVELKDTN-KG--VTILRTPKKDLKFEDFKNRPQVYGLPVLFPPNRIDDGTFKLGD   92 (341)
T ss_dssp             TEEEEEEEET-TEEEEEETTTTTEEEEEEETT-TT--EECBCCCCTTCCHHHHHHSGGGSSCCEESSCSEEETTEEEETT
T ss_pred             CEEEEEEeCC-CEEEEEchhcCCEEEEEEeCC-CC--CeEEEcCCcccchhhhhhCCcccceeEeCCCCcccCCEEEECC
Confidence            3678999996 7999999 8999999999975 35  799999998   67775    566766777888753       


Q ss_pred             -eeccCccCCC-CCccccCCce
Q psy11903         92 -VITPDNWKSG-SRNTIESGGR  111 (179)
Q Consensus        92 -va~pd~~k~~-~~n~l~gG~~  111 (179)
                       .+.+++ +++ +.|.+||+-+
T Consensus        93 ~~y~l~~-N~~~~~~~lHG~~~  113 (341)
T 3os7_A           93 KTYKFPI-NEAKNNNYIHGFIK  113 (341)
T ss_dssp             EEEECCC-SBTTTTEEESCSGG
T ss_pred             EEEEccC-CCCCCCcCccCCcc
Confidence             444443 333 5789999753

>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}

Probab=98.30  E-value=1.3e-06  Score=74.86  Aligned_cols=79  Identities=6%  Similarity=0.056  Sum_probs=61.4

Q ss_pred             cEEEEEEEcCCCeEEEEe-cCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhccccccceecc--------ee
Q psy11903         27 PVRRFTLTNSQRMSVQVI-DYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCSKCEKKLGK--------VI   93 (179)
Q Consensus        27 ~v~~~tL~n~~gl~v~vl-nyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~kc~~klg~--------va   93 (179)
                      .+..|+|+|+ +++|+|+ ++||+|++|+++++ |  .+|+++++++++|.    ++|++..+.++||+.        .+
T Consensus        13 g~~~~~L~n~-~~~~~i~p~~GA~l~s~~~~~~-g--~~~l~~~~~~~~~~~~~~~~G~pv~~p~nRi~~g~~~~~G~~y   88 (326)
T 3mwx_A           13 GTPAIKAGNE-HLEMIVVPEWGSNVISLVDKTT-N--VQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTY   88 (326)
T ss_dssp             TEEEEEEEES-SEEEEEETTTTTEEEEEEETTT-T--EECBCCCSSHHHHHHCTTSSSCCEEBSCSEEETTEEEETTEEE
T ss_pred             CeEEEEEECC-CEEEEEchhcCCEEEEEEecCC-C--ceEEccCcChhHhhcCccccCceEcCCCCcccCCEEEECCEEE
Confidence            4788999996 7999999 79999999998754 4  68999999999887    466766666899843        44


Q ss_pred             ccCccCC-CCCccccCCc
Q psy11903         94 TPDNWKS-GSRNTIESGG  110 (179)
Q Consensus        94 ~pd~~k~-~~~n~l~gG~  110 (179)
                      .+++ ++ .+.|.+||+-
T Consensus        89 ~l~~-N~~~~~~~lHG~~  105 (326)
T 3mwx_A           89 HFDI-NEKDKHNHLHGFL  105 (326)
T ss_dssp             ECCC-CBTTTTEEESBSC
T ss_pred             EccC-CCCCCCccccCCc
Confidence            4443 33 2679999974

>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}

Probab=97.93  E-value=1.2e-05  Score=68.27  Aligned_cols=75  Identities=8%  Similarity=0.012  Sum_probs=56.3

Q ss_pred             EEEEEEcCCCeEEEEecC-CcEEEEEEeeCCCCcccceEeCcCCc-hhhhhhhhccccccceecc--------eeccCcc
Q psy11903         29 RRFTLTNSQRMSVQVIDY-GATITTIKVPDKRGNVDDVVLGFDDM-REEIYFIMVCSKCEKKLGK--------VITPDNW   98 (179)
Q Consensus        29 ~~~tL~n~~gl~v~vlny-GAtI~sl~vpdr~G~~~dVVLGfd~~-e~Y~~~gmvc~kc~~klg~--------va~pd~~   98 (179)
                      ..|+|+|+ +++|+|+++ ||+|+++  .  +|  ++||++++.. ..+.+.+++|.+..+||..        .+.+++ 
T Consensus         3 ~~~~l~n~-~~~~~i~~~~Ga~l~s~--~--~g--~~vl~~~~~~~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~~-   74 (291)
T 3nre_A            3 TIYTLSHG-SLKLDVSDQGGVIEGFW--R--DT--TPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQP-   74 (291)
T ss_dssp             CEEEEEET-TEEEEEETBTTEEEEEE--E--TT--EESSCCCCCSSCGGGSSEEEEBSCCSBCGGGEEEETTEEEECCC-
T ss_pred             cEEEEcCC-CEEEEEEcccCceEEEE--e--CC--CEEEECCCcccCccccCCcEEEeeCCEecCCEEEECCEEEECCC-
Confidence            36899996 899999996 9999999  3  56  7999999721 2234567899999999853        455553 


Q ss_pred             CCC-CCccccCCce
Q psy11903         99 KSG-SRNTIESGGR  111 (179)
Q Consensus        99 k~~-~~n~l~gG~~  111 (179)
                      +++ ..|.+||+.+
T Consensus        75 N~~~~~~~~HG~~~   88 (291)
T 3nre_A           75 NVEWDAHYLHGDGW   88 (291)
T ss_dssp             CSTTCSSCBSBSGG
T ss_pred             CCCCCCCCCCCchh
Confidence            443 2799999854

>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}

Probab=97.51  E-value=9.7e-05  Score=62.52  Aligned_cols=56  Identities=14%  Similarity=0.108  Sum_probs=44.7

Q ss_pred             EEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh-hhhhccccccceecc
Q psy11903         30 RFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI-YFIMVCSKCEKKLGK   91 (179)
Q Consensus        30 ~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~-~~gmvc~kc~~klg~   91 (179)
                      .|+|+|+ +++|+|+++||+|++|++++ +|  .+||++++  ++|. ..+.+|.+..+||..
T Consensus         2 ~~~l~n~-~~~~~i~~~Ga~l~s~~~~~-~g--~e~l~~~~--~~~~~~~~p~l~P~~~Ri~~   58 (294)
T 3q1n_A            2 MITIENS-KFKAGIAERGAELQSLVNKA-DN--YEYVWTGD--KTFWNRHAPILFPSIGKSNQ   58 (294)
T ss_dssp             EEEEECS-SEEEEEETBTTEEEEEEETT-TT--EECBCCCC--TTTCSCSCCEEBSCCSCCGG
T ss_pred             EEEEECC-CEEEEEEccCcEEEEEEeCC-CC--CEEEEcCC--hhhccCCCCEEEeccCCcCC
Confidence            4789995 79999999999999999874 46  68999986  3444 345788888888853

>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A

Probab=97.00  E-value=0.00081  Score=57.03  Aligned_cols=58  Identities=9%  Similarity=-0.030  Sum_probs=42.9

Q ss_pred             cEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhhhh----h--hccccccceec
Q psy11903         27 PVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIYF----I--MVCSKCEKKLG   90 (179)
Q Consensus        27 ~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~~~----g--mvc~kc~~klg   90 (179)
                      .+..|+|+|+ +++|+|++|||+|+++++++  |  ++|++++ +.++|...    |  .+|.+..+|++
T Consensus        40 ~~~~~~L~n~-~~~a~I~~~GA~l~s~~~~~--g--~evL~~~-~~~~~~~~~~~~GG~pil~P~~gRi~  103 (309)
T 2hta_A           40 DLDLIVVDHP-QVKASFALQGAHLLSWKPVG--E--EEVLWLS-NNTPFKTGVALRGGVPICWPWFGPAA  103 (309)
T ss_dssp             TEEEEEEEET-TEEEEEETBTTEEEEEEETT--S--CCCBCBC-TTCCCCTTCCCSBSBCEEBSCCSSCS
T ss_pred             CceEEEEeCC-CeEEEEeccCcEEEEEEeCC--C--CEEEeCC-chHhccCCCCeeccceEEEecCCCCC
Confidence            4778999996 79999999999999999873  4  6776654 77777632    1  36666666654

>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}

Probab=96.93  E-value=0.00099  Score=56.80  Aligned_cols=56  Identities=20%  Similarity=0.259  Sum_probs=41.5

Q ss_pred             EEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh-hhhhccccccceecc
Q psy11903         30 RFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI-YFIMVCSKCEKKLGK   91 (179)
Q Consensus        30 ~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~-~~gmvc~kc~~klg~   91 (179)
                      .|+|+|+ +++|+|+++||+|++|.  |++|. .+||++.+.  .|. .-..+|.+..+||..
T Consensus         2 ~~~l~n~-~~~~~i~~~GA~l~s~~--~~~~~-~e~l~~~~~--~~~~~~~pil~P~~nRi~~   58 (307)
T 3dcd_A            2 DYTIENN-MIKVVISDHGAEIQSVK--SAHTD-EEFMWQANP--EIWGRHAPVLFPIVGRLKN   58 (307)
T ss_dssp             EEEEECS-SEEEEEETBTTEEEEEE--ETTTC-CBCBCCCCT--TTCCCSSCEEBSCSSCCGG
T ss_pred             EEEEECC-CEEEEEEccCcEEEEEE--ECCCC-cEEEECCCh--hhcCCCCcEEEeecCccCC
Confidence            4789996 69999999999999998  43333 689998653  232 122688888888853

>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*

Probab=96.93  E-value=0.00057  Score=57.31  Aligned_cols=58  Identities=17%  Similarity=0.117  Sum_probs=42.7

Q ss_pred             cEEEEEEEcCCCe--EEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhhh----hh--hccccccceec
Q psy11903         27 PVRRFTLTNSQRM--SVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEIY----FI--MVCSKCEKKLG   90 (179)
Q Consensus        27 ~v~~~tL~n~~gl--~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~~----~g--mvc~kc~~klg   90 (179)
                      .+..|+|+|++++  +++|++|||+|+++++   +|.  +|+++ .+.++|..    .|  .+|.+..+|++
T Consensus         6 ~~~~~~L~n~~~~~~~~~i~~~Ga~l~s~~~---~G~--~vl~~-~~~~~~~~~~~~~GGip~l~P~~gr~~   71 (297)
T 2cir_A            6 TDKEVVLTHPADETTSVHILKYGATVYSWKL---KSE--EQLWL-STAAKLDGSKPVRGGIPLVFPVFGKNS   71 (297)
T ss_dssp             CSSEEEEEETTEEEEEEEEETBTTEEEEEEE---TTE--ECBCB-CTTCCCSSSSCCSBSBCEEBSCSSCCS
T ss_pred             CCCEEEEeCCCCceeEEEEECCCcEEEEEEe---CCe--EEEec-CcHHHhcCCCCccCCCCEEEEecCCCC
Confidence            4668999997778  9999999999999998   363  77655 46777763    22  56666666553

>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}

Probab=96.38  E-value=0.0067  Score=50.92  Aligned_cols=57  Identities=16%  Similarity=0.159  Sum_probs=42.6

Q ss_pred             cEEEEEEEcCC-CeEEEEe-cCCcEEEEEEeeCCCCcccceEeCcCCchhhh------hhhh-ccccccceec
Q psy11903         27 PVRRFTLTNSQ-RMSVQVI-DYGATITTIKVPDKRGNVDDVVLGFDDMREEI------YFIM-VCSKCEKKLG   90 (179)
Q Consensus        27 ~v~~~tL~n~~-gl~v~vl-nyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~------~~gm-vc~kc~~klg   90 (179)
                      .+..|+|+|+. |++++|+ ++||.|+++.+   +|  ++|+ .++. ++|.      ..|+ +|.+..+|++
T Consensus        10 ~~~~~~l~n~~~g~~~~v~~~~Ga~l~s~~~---~g--~~~l-~~~~-~~~~~~~~~~~gg~Pvl~P~~gri~   75 (289)
T 3k25_A           10 RPLTYHLEDDQSLARLSLVPGRGGLVTEWTV---QG--QPIL-YFDR-ERFQDPSLSVRGGIPILFPICGNLP   75 (289)
T ss_dssp             BCCEEEEEETTTTEEEEEEGGGTSEEEEEEE---TT--EECB-CBCT-TGGGSTTSCCCBSBCEEBSCSSCCG
T ss_pred             CceEEEEECCCCCeEEEeehhcCCEEEEEEe---CC--EEEE-ecCh-hhccCcccccCCCCCEEECCCCCCC
Confidence            58889999974 8999999 89999999987   46  4765 4543 4443      2244 7888888875

>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3

Probab=87.87  E-value=0.099  Score=38.27  Aligned_cols=36  Identities=17%  Similarity=0.351  Sum_probs=28.6

Q ss_pred             ccchhhcccc--------cCCCccCcccccc----cCcccccCccccc
Q psy11903        135 SCKICRQKVH--------QVGSHYCQACAYK----KGICAMCGKKLLD  170 (179)
Q Consensus       135 ~c~~ck~~~~--------~~~~~yc~~cay~----~g~c~mcgk~~~d  170 (179)
                      +|..|++.+.        .+|..||..|-.+    +|.|+.|++.|.+
T Consensus        34 ~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~   81 (122)
T 1m3v_A           34 KCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSG   81 (122)
T ss_dssp             CCSSSCCCTTTSEECCEEETTEEECHHHHHHHHCCCCSSSCSSCCSCC
T ss_pred             CcCCCCCcccccCCeEEEECCeeecHHHHHHHcCCCCccccCCCCcCc
Confidence            7888887774        3467899999875    5699999999984

>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.20  E-value=0.39  Score=30.86  Aligned_cols=37  Identities=19%  Similarity=0.680  Sum_probs=28.5

Q ss_pred             cccchhhcccccC-----CCccCccccc-----ccCcccccCccccc
Q psy11903        134 ESCKICRQKVHQV-----GSHYCQACAY-----KKGICAMCGKKLLD  170 (179)
Q Consensus       134 ~~c~~ck~~~~~~-----~~~yc~~cay-----~~g~c~mcgk~~~d  170 (179)
                      -.|.||...+..+     ||.||..|..     ....|.+|.+.+..
T Consensus        16 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~   62 (66)
T 2ecy_A           16 YKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVK   62 (66)
T ss_dssp             EECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred             CCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence            4799998765443     8899999986     34579999998864

>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}

Probab=85.42  E-value=0.28  Score=32.36  Aligned_cols=36  Identities=31%  Similarity=0.782  Sum_probs=28.3

Q ss_pred             cccchhhccccc-----CCCccCcccccc-----------cCcccccCcccc
Q psy11903        134 ESCKICRQKVHQ-----VGSHYCQACAYK-----------KGICAMCGKKLL  169 (179)
Q Consensus       134 ~~c~~ck~~~~~-----~~~~yc~~cay~-----------~g~c~mcgk~~~  169 (179)
                      -.|.||......     =||.||..|..+           ...|.+|...+.
T Consensus        13 ~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~   64 (79)
T 2egp_A           13 VTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS   64 (79)
T ss_dssp             CEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred             CCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence            478888765544     388999999874           668999999875

>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.93  E-value=0.36  Score=31.95  Aligned_cols=36  Identities=31%  Similarity=0.774  Sum_probs=29.1

Q ss_pred             cccchhhccccc-----CCCccCcccccc----------cCcccccCcccc
Q psy11903        134 ESCKICRQKVHQ-----VGSHYCQACAYK----------KGICAMCGKKLL  169 (179)
Q Consensus       134 ~~c~~ck~~~~~-----~~~~yc~~cay~----------~g~c~mcgk~~~  169 (179)
                      ..|.||...+..     =||.||..|..+          ...|.+|.+.+.
T Consensus        20 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~   70 (85)
T 2ecv_A           20 VTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ   70 (85)
T ss_dssp             CCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred             CCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence            489999876543     388999999865          678999999876

>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1

Probab=82.74  E-value=0.22  Score=32.02  Aligned_cols=35  Identities=31%  Similarity=0.789  Sum_probs=25.9

Q ss_pred             ccchhhc-cc---------ccCCCccCccccccc-----CcccccCcccc
Q psy11903        135 SCKICRQ-KV---------HQVGSHYCQACAYKK-----GICAMCGKKLL  169 (179)
Q Consensus       135 ~c~~ck~-~~---------~~~~~~yc~~cay~~-----g~c~mcgk~~~  169 (179)
                      .|.||.. ..         ..=||.||..|.-+-     ..|.+|++.+.
T Consensus         5 ~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~   54 (65)
T 1g25_A            5 GCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLR   54 (65)
T ss_dssp             CCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCS
T ss_pred             cCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccc
Confidence            6888887 22         234889999997433     57999999885

>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=82.61  E-value=0.47  Score=31.58  Aligned_cols=38  Identities=29%  Similarity=0.583  Sum_probs=30.0

Q ss_pred             cccchhhccccc-----CCCc-cCcccccccCcccccCcccccc
Q psy11903        134 ESCKICRQKVHQ-----VGSH-YCQACAYKKGICAMCGKKLLDV  171 (179)
Q Consensus       134 ~~c~~ck~~~~~-----~~~~-yc~~cay~~g~c~mcgk~~~d~  171 (179)
                      ..|.||......     =||. +|..|+-+...|.+|.+.|.++
T Consensus        26 ~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~   69 (75)
T 2ecg_A           26 KLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFK   69 (75)
T ss_dssp             HSCSSSCSSCCCBCCSSSCCCCBCHHHHHHCSBCTTTCCBCCCC
T ss_pred             CCCCcCCCCCCCEEEecCCCHHHHHHHhhCCCCCccCCceecCc
Confidence            478899664433     3666 9999999999999999998764

>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=82.31  E-value=0.39  Score=31.76  Aligned_cols=36  Identities=28%  Similarity=0.750  Sum_probs=28.9

Q ss_pred             cccchhhccccc-----CCCccCcccccc----------cCcccccCcccc
Q psy11903        134 ESCKICRQKVHQ-----VGSHYCQACAYK----------KGICAMCGKKLL  169 (179)
Q Consensus       134 ~~c~~ck~~~~~-----~~~~yc~~cay~----------~g~c~mcgk~~~  169 (179)
                      -.|.||...+..     =||.||..|..+          ...|.+|...+.
T Consensus        20 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~   70 (85)
T 2ecw_A           20 VTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP   70 (85)
T ss_dssp             TSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred             CCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence            489999876544     388999999865          678999999876

>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1

Probab=82.22  E-value=0.3  Score=35.74  Aligned_cols=38  Identities=26%  Similarity=0.655  Sum_probs=30.9

Q ss_pred             cccchhhcccccCCCcc-Ccccc---cccCcccccCcccccc
Q psy11903        134 ESCKICRQKVHQVGSHY-CQACA---YKKGICAMCGKKLLDV  171 (179)
Q Consensus       134 ~~c~~ck~~~~~~~~~y-c~~ca---y~~g~c~mcgk~~~d~  171 (179)
                      ..|.+|.+.+.+.|..| |..|.   -+.+.|+-|+.++--.
T Consensus        33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevL   74 (101)
T 2jne_A           33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVL   74 (101)
T ss_dssp             CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEE
T ss_pred             ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHH
Confidence            58999999987767777 88886   4568999999988643

>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A

Probab=80.90  E-value=0.54  Score=31.32  Aligned_cols=39  Identities=28%  Similarity=0.581  Sum_probs=31.4

Q ss_pred             cccchhhccccc-----CCCc-cCcccccccCcccccCccccccc
Q psy11903        134 ESCKICRQKVHQ-----VGSH-YCQACAYKKGICAMCGKKLLDVK  172 (179)
Q Consensus       134 ~~c~~ck~~~~~-----~~~~-yc~~cay~~g~c~mcgk~~~d~~  172 (179)
                      ..|.||......     =||. +|..|+.+-..|.+|-+.+...-
T Consensus        25 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~   69 (74)
T 4ic3_A           25 KLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQ   69 (74)
T ss_dssp             TBCTTTSSSBCCEEEETTCCBCCCHHHHTTCSBCTTTCCBCSEEE
T ss_pred             CCCCCCCCCCCCEEEcCCCChhHHHHhhhcCccCCCcCcCccCcE
Confidence            479999875543     3777 99999999999999999987653

>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1

Probab=80.74  E-value=0.76  Score=29.40  Aligned_cols=38  Identities=24%  Similarity=0.638  Sum_probs=28.6

Q ss_pred             cccchhhcccccC------CCccCcccccc----cCcccccCcccccc
Q psy11903        134 ESCKICRQKVHQV------GSHYCQACAYK----KGICAMCGKKLLDV  171 (179)
Q Consensus       134 ~~c~~ck~~~~~~------~~~yc~~cay~----~g~c~mcgk~~~d~  171 (179)
                      ..|.||......+      ||.||..|..+    ...|.+|.+.+...
T Consensus         6 ~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~   53 (68)
T 1chc_A            6 ERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESV   53 (68)
T ss_dssp             CCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCE
T ss_pred             CCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHhh
Confidence            4788887765442      78899999853    67899999988654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	179
d1so0a_	344	b.30.5.4 (A:) Galactose mutarotase {Human (Homo sa	4e-15
d1lura_	329	b.30.5.4 (A:) Aldose 1-epimerase homologue {Nemato	3e-14
d1z45a1	342	b.30.5.4 (A:358-699) Galactose mutarotase {Baker's	2e-12
d1nsza_	340	b.30.5.4 (A:) Galactose mutarotase {Lactococcus la	7e-11

>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Length = 344

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Galactose mutarotase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 4e-15
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)

Query: 9  IMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLG 68
          +    FGE    S G    V +F L +   + V +I +G TIT ++V D++G   DVVLG
Sbjct: 6  VTRAVFGE--LPSGGG--TVEKFQLQSD-LLRVDIISWGCTITALEVKDRQGRASDVVLG 60

Query: 69 FDDMRE 74
          F ++  
Sbjct: 61 FAELEG 66

>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 329

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Aldose 1-epimerase homologue
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 66.8 bits (162), Expect = 3e-14
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query: 31 FTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE 74
            + N Q ++  ++ +GAT+  +  PDK G   D+VLGFD + E
Sbjct: 5  IEIANKQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDE 48

>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Galactose mutarotase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.1 bits (150), Expect = 2e-12
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 10/65 (15%)

Query: 10 MEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGF 69
          +E +F     E        R  T+    R      + GA+I  +KV  +      VVLG+
Sbjct: 3  VEARFSA---EDMRYD--ARFVTIGAGTRFQATFANLGASIVDLKVNGQ-----SVVLGY 52

Query: 70 DDMRE 74
          ++   
Sbjct: 53 ENEEG 57

>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Length = 340

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Galactose mutarotase
species: Lactococcus lactis [TaxId: 1358]

 Score = 57.5 bits (138), Expect = 7e-11
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 20 ESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMRE 74
             G        +LTN   +++   + GA I   +   K      ++LGFD  +E
Sbjct: 5  RDFGL--GSDLISLTNKAGVTISFTNLGARIVDWQKDGK-----HLILGFDSAKE 52

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	179
d1so0a_	344	Galactose mutarotase {Human (Homo sapiens) [TaxId:	99.76
d1lura_	329	Aldose 1-epimerase homologue {Nematode (Caenorhabd	99.66
d1nsza_	340	Galactose mutarotase {Lactococcus lactis [TaxId: 1	99.57
d1z45a1	342	Galactose mutarotase {Baker's yeast (Saccharomyces	99.49

>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Galactose mutarotase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.5e-19  Score=150.58  Aligned_cols=101  Identities=30%  Similarity=0.531  Sum_probs=87.6

Q ss_pred             ceeeeeccccceeccCCCceecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhc
Q psy11903          6 DVVIMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMV   81 (179)
Q Consensus         6 ~~~i~~~~FG~~~~~~~G~~~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmv   81 (179)
                      ++.|+++.||++|  +.|+  .+++|||+| ++|+|+|++|||+|++|++||++|..+|||||||++++|+    ++|++
T Consensus         3 m~~~~~~~fg~~~--~~g~--~v~~~tl~n-~~l~v~i~~~GA~i~~l~~~d~~G~~~~vvlg~~~~~~y~~~~~~~G~~   77 (344)
T d1so0a_           3 MASVTRAVFGELP--SGGG--TVEKFQLQS-DLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAV   77 (344)
T ss_dssp             BCEEEEEEEEEET--TTTE--EEEEEEEEC-SSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTTCE
T ss_pred             cceEEhhhccccC--CCCe--EEEEEEEEc-CCEEEEEECcCcEEEEEEEECCCCCEeeeEeCCCCHHHHhhCCCccCCE
Confidence            6889999999997  3366  899999999 5999999999999999999999999999999999999998    68899


Q ss_pred             cccccceecc--------eeccCccCCCCCccccCCceec
Q psy11903         82 CSKCEKKLGK--------VITPDNWKSGSRNTIESGGRRI  113 (179)
Q Consensus        82 c~kc~~klg~--------va~pd~~k~~~~n~l~gG~~gi  113 (179)
                      .+++++||..        .++.++  +.+.|.+|||..++
T Consensus        78 lgp~anRI~~g~f~~~G~~y~l~~--n~~~~~~hg~~~~~  115 (344)
T d1so0a_          78 IGRVANRIAKGTFKVDGKEYHLAI--NKEPNSLHGGVRGF  115 (344)
T ss_dssp             ECSBCSEEGGGEEEETTEEEECCC--SBTTBEETTSSSCG
T ss_pred             eecCCCeeeCCEEEECCEEEEecc--CCCCcccccCCCCc
Confidence            9999999964        555553  44678899987654

>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Aldose 1-epimerase homologue
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.66  E-value=4.5e-17  Score=139.17  Aligned_cols=83  Identities=23%  Similarity=0.435  Sum_probs=74.0

Q ss_pred             EEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhccccccceecc--------eeccCc
Q psy11903         30 RFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCSKCEKKLGK--------VITPDN   97 (179)
Q Consensus        30 ~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~kc~~klg~--------va~pd~   97 (179)
                      +|+|+|++||+|+|+||||+|++|.+||++|..+|||||||++++|+    ++|++++++++||..        .+++++
T Consensus         4 ~i~l~N~~g~~v~i~~~GA~i~~l~~pd~~g~~~~vvlg~d~~~~Y~~~~~~~Ga~igr~aNRI~~g~f~~~G~~y~L~~   83 (329)
T d1lura_           4 FIEIANKQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQYTMTP   83 (329)
T ss_dssp             CEEEECSSSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHHCSSCTTCEECSBCSEEGGGEEEETTEEEECCC
T ss_pred             EEEEECCCCcEEEEECCCcEEEEEEEECCCCCEeeeEECCCCHHHHhhCCCccCcEecCcCCeeeCCeEEECCEEEEecc
Confidence            58999999999999999999999999999999999999999999998    789999999999973        556664


Q ss_pred             cCCCCCccccCCceecc
Q psy11903         98 WKSGSRNTIESGGRRIG  114 (179)
Q Consensus        98 ~k~~~~n~l~gG~~gi~  114 (179)
                       + .+.|++|||..+++
T Consensus        84 -N-~~~n~lHGg~~g~~   98 (329)
T d1lura_          84 -N-NGPHYLHGGPNGLG   98 (329)
T ss_dssp             -S-BTTBEETTCTTSGG
T ss_pred             -C-CCCcccccCCCCcc
Confidence             4 56799999987764

>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]}

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Galactose mutarotase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.57  E-value=1.9e-15  Score=129.99  Aligned_cols=89  Identities=21%  Similarity=0.338  Sum_probs=75.0

Q ss_pred             eeeccccceeccCCCceecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh----hhhhcccc
Q psy11903          9 IMEDKFGECINESNGQVLPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI----YFIMVCSK   84 (179)
Q Consensus         9 i~~~~FG~~~~~~~G~~~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~----~~gmvc~k   84 (179)
                      |+.+.||+          .+..|||+|++||+|+|++|||+|+++..+   |  +|||||||++++|+    ++|+++++
T Consensus         2 ~~~~~fg~----------~~~~~tl~N~~gl~v~i~~~GA~i~~~~~~---~--~~vvlg~d~~~~y~~~~~~~Ga~vGp   66 (340)
T d1nsza_           2 IKIRDFGL----------GSDLISLTNKAGVTISFTNLGARIVDWQKD---G--KHLILGFDSAKEYLEKDAYPGATVGP   66 (340)
T ss_dssp             EEEEEEET----------TEEEEEEECTTSCEEEEETBTTEEEEEEET---T--EESBCCCSSHHHHHHHCSCTTCEECS
T ss_pred             ceEccCCC----------ceeEEEEEcCCCcEEEEECCCeEEEEeccC---C--CeEEecCCCHHHHhhCCCccCcCccc
Confidence            56678874          478899999989999999999999999874   4  69999999999997    68999999


Q ss_pred             ccceecc--------eeccCccCCCCCccccCCceecc
Q psy11903         85 CEKKLGK--------VITPDNWKSGSRNTIESGGRRIG  114 (179)
Q Consensus        85 c~~klg~--------va~pd~~k~~~~n~l~gG~~gi~  114 (179)
                      +++||+.        .+++++ + .+.|++|||..|++
T Consensus        67 ~anRI~~g~f~~~G~~~~L~~-N-e~~~~lHGG~~g~~  102 (340)
T d1nsza_          67 TAGRIKDGLVKISGKDYILNQ-N-EGPQTLHGGEESIH  102 (340)
T ss_dssp             BCSEEGGGEEEETTEEEECCC-C-BTTBEETTSTTCGG
T ss_pred             ccCcccCCcccCCCEEEEecC-C-CCCccccccccccc
Confidence            9999964        455553 4 46799999988875

>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Galactose mutarotase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.49  E-value=1.1e-14  Score=124.38  Aligned_cols=84  Identities=19%  Similarity=0.276  Sum_probs=71.8

Q ss_pred             ecEEEEEEEcCCCeEEEEecCCcEEEEEEeeCCCCcccceEeCcCCchhhh-----hhhhccccccceecc--------e
Q psy11903         26 LPVRRFTLTNSQRMSVQVIDYGATITTIKVPDKRGNVDDVVLGFDDMREEI-----YFIMVCSKCEKKLGK--------V   92 (179)
Q Consensus        26 ~~v~~~tL~n~~gl~v~vlnyGAtI~sl~vpdr~G~~~dVVLGfd~~e~Y~-----~~gmvc~kc~~klg~--------v   92 (179)
                      .+.++|||.|+++|+|+|+||||+|++|++++     +|||||||++++|+     ++|++++++++||..        .
T Consensus        14 ~~~~~~tl~n~~~~~v~i~~~GA~i~~l~~~~-----~~vvlg~d~~~~Y~~~~~~y~Ga~iGr~AnRI~~g~f~~~G~~   88 (342)
T d1z45a1          14 YDARFVTIGAGTRFQATFANLGASIVDLKVNG-----QSVVLGYENEEGYLNPDSAYIGATIGRYANRISKGKFSLCNKD   88 (342)
T ss_dssp             TTSEEEEESTTSSEEEEEESBTTCEEEEEETT-----EECBCCCSSHHHHTCTTCCCTTCEECSBCSEEGGGEEEETTEE
T ss_pred             ceeEEEEEECCCceEEEEECCCeEEEEEEECC-----eEEEeCCCCHHHHhcCCCceECCEecccCCeeeCCEEEECCEE
Confidence            37899999998889999999999999999974     48999999999997     578999999999963        5


Q ss_pred             eccCccCCCCCccccCCceecccc
Q psy11903         93 ITPDNWKSGSRNTIESGGRRIGEN  116 (179)
Q Consensus        93 a~pd~~k~~~~n~l~gG~~gi~~n  116 (179)
                      +++++ | .+.|++|||..|++..
T Consensus        89 y~L~~-N-e~~~~lHgg~~g~~~~  110 (342)
T d1z45a1          89 YQLTV-N-NGVNANHSSIGSFHRK  110 (342)
T ss_dssp             EECCC-C-BTTBEETTGGGCGGGS
T ss_pred             EEecC-C-CCCcccccccCCCCce
Confidence            66664 4 4679999998777654