Psyllid ID: psy11933

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------8
Protein Sequence
MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQHFENKHPKNDLPEDLKDVQA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHcccccHHHHHHHHHcccccccccHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcEcHHHHccccccccHHHHHccccccccccHHHHHccc
Coil and Loop (DISEMBL)
MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVckaqmpdpktykqhfenkhpkndlpedlkdvqa
Flexible Loop (DISEMBL)
margqqklqsQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQHfenkhpkndlpedlkdvqa
Low Complexity Region (SEG)
MARGqqklqsqakaqekqakakkqqGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQHFENKHPKNDLPEDLKDVQA
Disordered region (IsUnstruct)
*************************************KALVHACVVCKA******************************
Disordered Region (DISOPRED)
************************************QKALVHACVVCKAQM***********************K****
Disordered Region (DISEMBL)
***************************************LVHACVVCKAQMPDPKTYKQHFENKHPKNDLPEDLKDVQA
Disordered Region (DISPRO)
***************************SLLDQKKAAQKALVHACVVCKAQMPDPKTYKQHFENKHPKNDLPEDL**VQ*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MARGxxxxxxxxxxxxxxxxxxxxxGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQHFENKHPKNDLPEDLKDVQA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	79	2.2.26 [Sep-21-2011]
Q5ZMM5	76	Zinc finger protein 706 O	yes	N/A	0.962	1.0	0.658	3e-19
Q9D115	76	Zinc finger protein 706 O	yes	N/A	0.962	1.0	0.658	3e-18
Q9Y5V0	76	Zinc finger protein 706 O	yes	N/A	0.962	1.0	0.658	3e-18

>sp|Q5ZMM5|ZN706_CHICK Zinc finger protein 706 OS=Gallus gallus GN=ZNF706 PE=4 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 3/79 (3%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARGQQK+QSQ K  +KQA+ KK+QGH   DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1  MARGQQKIQSQQKNAKKQAEQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57

Query: 61 FENKHPKNDLPEDLKDVQA 79
          FE+KHPK  LP +L DVQA
Sbjct: 58 FESKHPKTPLPPELADVQA 76

Gallus gallus (taxid: 9031)

>sp|Q9D115|ZN706_MOUSE Zinc finger protein 706 OS=Mus musculus GN=Znf706 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 3/79 (3%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARGQQK+QSQ K  +KQA  KK+QGH   DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1  MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57

Query: 61 FENKHPKNDLPEDLKDVQA 79
          FE+KHPK  LP +L DVQA
Sbjct: 58 FESKHPKTPLPPELADVQA 76

Mus musculus (taxid: 10090)

>sp|Q9Y5V0|ZN706_HUMAN Zinc finger protein 706 OS=Homo sapiens GN=ZNF706 PE=1 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 3/79 (3%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARGQQK+QSQ K  +KQA  KK+QGH   DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1  MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57

Query: 61 FENKHPKNDLPEDLKDVQA 79
          FE+KHPK  LP +L DVQA
Sbjct: 58 FESKHPKTPLPPELADVQA 76

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	79
389609617	77	similar to CG15715 [Papilio xuthus]	0.974	1.0	0.857	3e-30
357623209	77	hypothetical protein KGM_11571 [Danaus p	0.974	1.0	0.844	4e-30
194749835	77	GF10372 [Drosophila ananassae] gi|195435	0.974	1.0	0.857	8e-30
125978785	77	GA14782 [Drosophila pseudoobscura pseudo	0.974	1.0	0.844	1e-29
332029798	143	Zinc finger protein 706 [Acromyrmex echi	0.974	0.538	0.844	1e-29
322798577	77	hypothetical protein SINV_00067 [Solenop	0.974	1.0	0.857	1e-29
195129755	77	GI11305 [Drosophila mojavensis] gi|19537	0.974	1.0	0.844	2e-29
194873091	77	GG13518 [Drosophila erecta] gi|194873096	0.974	1.0	0.844	2e-29
195478478	77	GE22818 [Drosophila yakuba] gi|195495348	0.974	1.0	0.844	2e-29
307169878	77	Zinc finger protein 706 [Camponotus flor	0.974	1.0	0.844	4e-29

>gi|389609617|dbj|BAM18420.1| similar to CG15715 [Papilio xuthus]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/77 (85%), Positives = 70/77 (90%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARGQQK+QSQAKA EK +K KKQQGHS  DQKKAAQKALVH CV+CKAQMPDPKTYKQH
Sbjct: 1  MARGQQKIQSQAKAAEKLSKMKKQQGHSATDQKKAAQKALVHICVICKAQMPDPKTYKQH 60

Query: 61 FENKHPKNDLPEDLKDV 77
          FENKHPKNDLPEDLK +
Sbjct: 61 FENKHPKNDLPEDLKTI 77

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357623209|gb|EHJ74453.1| hypothetical protein KGM_11571 [Danaus plexippus]

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 70/77 (90%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARG QK+QSQAKA EKQ+K KKQQGHS  +QKKAAQKALVH C++CKAQMPDPKTYKQH
Sbjct: 1  MARGHQKIQSQAKAAEKQSKLKKQQGHSATEQKKAAQKALVHVCIICKAQMPDPKTYKQH 60

Query: 61 FENKHPKNDLPEDLKDV 77
          FENKHPKNDLPEDLK V
Sbjct: 61 FENKHPKNDLPEDLKSV 77

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194749835|ref|XP_001957341.1| GF10372 [Drosophila ananassae] gi|195435856|ref|XP_002065894.1| GK15865 [Drosophila willistoni] gi|190624623|gb|EDV40147.1| GF10372 [Drosophila ananassae] gi|194161979|gb|EDW76880.1| GK15865 [Drosophila willistoni]

 Score =  134 bits (336), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 66/77 (85%), Positives = 70/77 (90%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARG QK+QSQAKA EKQAK KKQQGHS  DQKKAAQKALVH C VCK+QMPDPKTYKQH
Sbjct: 1  MARGHQKIQSQAKAAEKQAKMKKQQGHSANDQKKAAQKALVHVCAVCKSQMPDPKTYKQH 60

Query: 61 FENKHPKNDLPEDLKDV 77
          FENKHPKND+PE+LKDV
Sbjct: 61 FENKHPKNDMPEELKDV 77

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125978785|ref|XP_001353425.1| GA14782 [Drosophila pseudoobscura pseudoobscura] gi|195160721|ref|XP_002021223.1| GL24927 [Drosophila persimilis] gi|54642185|gb|EAL30934.1| GA14782 [Drosophila pseudoobscura pseudoobscura] gi|194118336|gb|EDW40379.1| GL24927 [Drosophila persimilis]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 70/77 (90%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARG QK+QSQAKA +KQAK KKQQGHS  DQKKAAQKALVH C VCK+QMPDPKTYKQH
Sbjct: 1  MARGHQKIQSQAKAADKQAKMKKQQGHSATDQKKAAQKALVHVCAVCKSQMPDPKTYKQH 60

Query: 61 FENKHPKNDLPEDLKDV 77
          FENKHPKND+PE+LKDV
Sbjct: 61 FENKHPKNDMPEELKDV 77

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332029798|gb|EGI69667.1| Zinc finger protein 706 [Acromyrmex echinatior]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 70/77 (90%)

Query: 1   MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
           MARGQQK+QSQAKA EK AK KKQQGHS  DQKKAAQKALVH C VCKAQMPDPKTYKQH
Sbjct: 67  MARGQQKIQSQAKAAEKSAKLKKQQGHSANDQKKAAQKALVHVCTVCKAQMPDPKTYKQH 126

Query: 61  FENKHPKNDLPEDLKDV 77
           FENKHPKN+LP+DLK++
Sbjct: 127 FENKHPKNELPDDLKNI 143

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322798577|gb|EFZ20181.1| hypothetical protein SINV_00067 [Solenopsis invicta]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/77 (85%), Positives = 70/77 (90%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARGQQK+QSQAKA EK AK KKQQGHS  DQKKAAQKALVH C VCKAQMPDPKTYKQH
Sbjct: 1  MARGQQKIQSQAKAAEKSAKLKKQQGHSANDQKKAAQKALVHVCSVCKAQMPDPKTYKQH 60

Query: 61 FENKHPKNDLPEDLKDV 77
          FENKHPKNDLP+DLK++
Sbjct: 61 FENKHPKNDLPDDLKNI 77

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195129755|ref|XP_002009320.1| GI11305 [Drosophila mojavensis] gi|195379830|ref|XP_002048678.1| GJ11224 [Drosophila virilis] gi|193920929|gb|EDW19796.1| GI11305 [Drosophila mojavensis] gi|194155836|gb|EDW71020.1| GJ11224 [Drosophila virilis]

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 71/77 (92%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARG QK+QSQAKA EKQAK KKQQGHS  DQKKAAQKALVH CV+CK+QMPDPKTYKQH
Sbjct: 1  MARGHQKIQSQAKAAEKQAKMKKQQGHSANDQKKAAQKALVHVCVLCKSQMPDPKTYKQH 60

Query: 61 FENKHPKNDLPEDLKDV 77
          FENKHPKND+PE+LKD+
Sbjct: 61 FENKHPKNDMPEELKDL 77

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194873091|ref|XP_001973139.1| GG13518 [Drosophila erecta] gi|194873096|ref|XP_001973140.1| GG13517 [Drosophila erecta] gi|190654922|gb|EDV52165.1| GG13518 [Drosophila erecta] gi|190654923|gb|EDV52166.1| GG13517 [Drosophila erecta]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 70/77 (90%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARG QK+QSQAKA EKQAK KKQQGHS  DQKKAAQKALVH C VCK+QMPDPKTYKQH
Sbjct: 1  MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVHVCAVCKSQMPDPKTYKQH 60

Query: 61 FENKHPKNDLPEDLKDV 77
          FENKHPKND+PE+LK+V
Sbjct: 61 FENKHPKNDMPEELKEV 77

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195478478|ref|XP_002086504.1| GE22818 [Drosophila yakuba] gi|195495348|ref|XP_002095229.1| GE19808 [Drosophila yakuba] gi|194181330|gb|EDW94941.1| GE19808 [Drosophila yakuba] gi|194186294|gb|EDW99905.1| GE22818 [Drosophila yakuba]

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 70/77 (90%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARG QK+QSQAKA EKQAK KKQQGHS  DQKKAAQKALV+ C VCK+QMPDPKTYKQH
Sbjct: 1  MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPKTYKQH 60

Query: 61 FENKHPKNDLPEDLKDV 77
          FENKHPKND+PE+LKDV
Sbjct: 61 FENKHPKNDMPEELKDV 77

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307169878|gb|EFN62387.1| Zinc finger protein 706 [Camponotus floridanus]

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 70/77 (90%)

Query: 1  MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
          MARGQQK+QSQAKA EK AK KKQQGHS  DQKKAAQKALVH C VCKAQMPDPKTYKQH
Sbjct: 1  MARGQQKIQSQAKAAEKSAKLKKQQGHSANDQKKAAQKALVHVCSVCKAQMPDPKTYKQH 60

Query: 61 FENKHPKNDLPEDLKDV 77
          FENKHPKN+LP+DLK++
Sbjct: 61 FENKHPKNELPDDLKNI 77

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	79
FB|FBgn0036538	77	CG15715 [Drosophila melanogast	0.974	1.0	0.597	6.3e-21
FB|FBgn0036537	77	CG18081 [Drosophila melanogast	0.974	1.0	0.597	6.3e-21
ZFIN|ZDB-GENE-040808-48	76	zgc:91910 "zgc:91910" [Danio r	0.620	0.644	0.693	1.6e-15
UNIPROTKB|Q5ZMM5	76	ZNF706 "Zinc finger protein 70	0.962	1.0	0.493	2e-15
UNIPROTKB|Q32P60	76	MGC133632 "Uncharacterized pro	0.962	1.0	0.493	2e-15
UNIPROTKB|E2RQA4	76	ZNF706 "Uncharacterized protei	0.962	1.0	0.493	2e-15
UNIPROTKB|Q9Y5V0	76	ZNF706 "Zinc finger protein 70	0.962	1.0	0.493	2e-15
UNIPROTKB|F2Z559	76	LOC100521722 "Uncharacterized	0.962	1.0	0.493	2e-15
MGI|MGI:1915286	76	Zfp706 "zinc finger protein 70	0.962	1.0	0.493	2e-15
ZFIN|ZDB-GENE-040718-454	76	znf706 "zinc finger protein 70	0.962	1.0	0.481	1.1e-14

FB|FBgn0036538 CG15715 [Drosophila melanogaster (taxid:7227)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 46/77 (59%), Positives = 52/77 (67%)

Query:     1 MARGXXXXXXXXXXXXXXXXXXXXXGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
             MARG                     GHS  DQKKAAQKALV+ C VCK+QMPDP+TYKQH
Sbjct:     1 MARGHQKIRSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPRTYKQH 60

Query:    61 FENKHPKNDLPEDLKDV 77
             FENKHPKND+PE+LK+V
Sbjct:    61 FENKHPKNDIPEELKEV 77

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0036537 CG18081 [Drosophila melanogaster (taxid:7227)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 46/77 (59%), Positives = 52/77 (67%)

Query:     1 MARGXXXXXXXXXXXXXXXXXXXXXGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
             MARG                     GHS  DQKKAAQKALV+ C VCK+QMPDPKTYKQH
Sbjct:     1 MARGHQKIQSQAKASEKQAKLKKQQGHSANDQKKAAQKALVYVCAVCKSQMPDPKTYKQH 60

Query:    61 FENKHPKNDLPEDLKDV 77
             FENKHPKND+P++LK+V
Sbjct:    61 FENKHPKNDMPDELKEV 77

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-040808-48 zgc:91910 "zgc:91910" [Danio rerio (taxid:7955)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 34/49 (69%), Positives = 41/49 (83%)

Query:    31 DQKKAAQKALVHACVVCKAQMPDPKTYKQHFENKHPKNDLPEDLKDVQA 79
             DQK AA+ ALVH C VC+ QMPDPKT+KQHFE+KHPK+ +P +L DVQA
Sbjct:    28 DQKTAAKAALVHTCPVCRTQMPDPKTFKQHFESKHPKSPMPAELADVQA 76

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5ZMM5 ZNF706 "Zinc finger protein 706" [Gallus gallus (taxid:9031)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 39/79 (49%), Positives = 46/79 (58%)

Query:     1 MARGXXXXXXXXXXXXXXXXXXXXXGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
             MARG                     GH   DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct:     1 MARGQQKIQSQQKNAKKQAEQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57

Query:    61 FENKHPKNDLPEDLKDVQA 79
             FE+KHPK  LP +L DVQA
Sbjct:    58 FESKHPKTPLPPELADVQA 76

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q32P60 MGC133632 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 39/79 (49%), Positives = 46/79 (58%)

Query:     1 MARGXXXXXXXXXXXXXXXXXXXXXGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
             MARG                     GH   DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct:     1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57

Query:    61 FENKHPKNDLPEDLKDVQA 79
             FE+KHPK  LP +L DVQA
Sbjct:    58 FESKHPKTPLPPELADVQA 76

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E2RQA4 ZNF706 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 39/79 (49%), Positives = 46/79 (58%)

Query:     1 MARGXXXXXXXXXXXXXXXXXXXXXGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
             MARG                     GH   DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct:     1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57

Query:    61 FENKHPKNDLPEDLKDVQA 79
             FE+KHPK  LP +L DVQA
Sbjct:    58 FESKHPKTPLPPELADVQA 76

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q9Y5V0 ZNF706 "Zinc finger protein 706" [Homo sapiens (taxid:9606)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 39/79 (49%), Positives = 46/79 (58%)

Query:     1 MARGXXXXXXXXXXXXXXXXXXXXXGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
             MARG                     GH   DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct:     1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57

Query:    61 FENKHPKNDLPEDLKDVQA 79
             FE+KHPK  LP +L DVQA
Sbjct:    58 FESKHPKTPLPPELADVQA 76

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F2Z559 LOC100521722 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 39/79 (49%), Positives = 46/79 (58%)

Query:     1 MARGXXXXXXXXXXXXXXXXXXXXXGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
             MARG                     GH   DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct:     1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57

Query:    61 FENKHPKNDLPEDLKDVQA 79
             FE+KHPK  LP +L DVQA
Sbjct:    58 FESKHPKTPLPPELADVQA 76

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

MGI|MGI:1915286 Zfp706 "zinc finger protein 706" [Mus musculus (taxid:10090)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 39/79 (49%), Positives = 46/79 (58%)

Query:     1 MARGXXXXXXXXXXXXXXXXXXXXXGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
             MARG                     GH   DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct:     1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57

Query:    61 FENKHPKNDLPEDLKDVQA 79
             FE+KHPK  LP +L DVQA
Sbjct:    58 FESKHPKTPLPPELADVQA 76

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-040718-454 znf706 "zinc finger protein 706" [Danio rerio (taxid:7955)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 38/79 (48%), Positives = 47/79 (59%)

Query:     1 MARGXXXXXXXXXXXXXXXXXXXXXGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQH 60
             MARG                     GH   DQK AA+ ALV  C VC++QMPDPKT+KQH
Sbjct:     1 MARGHQKIQSQQKNAKKQAEIKKSKGH---DQKTAAKAALVFTCAVCRSQMPDPKTFKQH 57

Query:    61 FENKHPKNDLPEDLKDVQA 79
             FE+KHPK+ LP +L+ V+A
Sbjct:    58 FESKHPKSPLPPELEGVEA 76

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9Y5V0	ZN706_HUMAN	No assigned EC number	0.6582	0.9620	1.0	yes	N/A
Q5ZMM5	ZN706_CHICK	No assigned EC number	0.6582	0.9620	1.0	yes	N/A
Q9D115	ZN706_MOUSE	No assigned EC number	0.6582	0.9620	1.0	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	79
KOG4118|consensus	74		99.97
PF12907	40	zf-met2: Zinc-binding	99.57
PF04419	38	4F5: 4F5 protein family; InterPro: IPR007513 Membe	98.0
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.24
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.09
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.9
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.42
smart00355	26	ZnF_C2H2 zinc finger.	95.51
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.43
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.2
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.14
KOG4488|consensus	70		94.89
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	94.14
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	93.69
PHA00616	44	hypothetical protein	93.64
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	92.52
KOG1842|consensus	505		91.6
PHA02768	55	hypothetical protein; Provisional	91.34
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	89.38
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	89.2
PF04780	466	DUF629: Protein of unknown function (DUF629); Inte	88.37
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	88.3
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	86.69
PHA00732	79	hypothetical protein	85.89
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	85.88
PHA00733	128	hypothetical protein	84.65

>KOG4118|consensus

Probab=99.97  E-value=1.7e-31  Score=168.46  Aligned_cols=74  Identities=73%  Similarity=1.079  Sum_probs=72.3

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHhhhhccchhhhhcCCChhhHhHHHHcCCCCCCCCchhhhh
Q psy11933          1 MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPDPKTYKQHFENKHPKNDLPEDLKDV   77 (79)
Q Consensus         1 M~rG~qK~q~q~r~~~k~~~~~~~~~~s~~sq~ka~~aA~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~e~~~~   77 (79)
                      |+||+||+|+|+||++++++++++.|+   ||++++.+||.++|.||+.+||++++|++||||||||++||+||.+|
T Consensus         1 MARGhQKiqSQqknaeKqAkakk~~G~---DQK~AA~~aL~~kCtVC~~~mpdpktfkqhfe~kHpk~~~P~eL~~v   74 (74)
T KOG4118|consen    1 MARGHQKIQSQQKNAEKQAKAKKKQGH---DQKAAAMAALHHKCTVCMVQMPDPKTFKQHFENKHPKEPLPEELSEV   74 (74)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHcCc---cHHHHHHHHHHhhhHhhHhhCCCCchHHHHHhhcCCCCCCCHhhccC
Confidence            999999999999999999999999998   99999999999999999999999999999999999999999999876

>PF12907 zf-met2: Zinc-binding

Probab=99.57  E-value=4.3e-16  Score=89.15  Aligned_cols=35  Identities=34%  Similarity=0.608  Sum_probs=31.5

Q ss_pred             hccchhhhhcCCC---hhhHhHHHHcCCCCCCCCchhh
Q psy11933         41 VHACVVCKAQMPD---PKTYKQHFENKHPKNDLPEDLK   75 (79)
Q Consensus        41 ~~~C~vC~~~f~~---~k~l~~H~esKHpK~~~p~e~~   75 (79)
                      +|+|+|||++||.   +++|++|+||||||.+|++++=
T Consensus         1 ~i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~~~CFP   38 (40)
T PF12907_consen    1 NIICKICRQTFMQTTNEPQLKEHAENKHPKNTFEECFP   38 (40)
T ss_pred             CcCcHHhhHHHHhcCCHHHHHHHHHccCCCCCHHHcCC
Confidence            5899999999998   8999999999999998887653

>PF04419 4F5: 4F5 protein family; InterPro: IPR007513 Members of this family are short proteins that are rich in aspartate, glutamate, lysine and arginine

Probab=98.00  E-value=7.8e-08  Score=54.17  Aligned_cols=38  Identities=53%  Similarity=0.632  Sum_probs=18.0

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHhhhh
Q psy11933          1 MARGQQKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALV   41 (79)
Q Consensus         1 M~rG~qK~q~q~r~~~k~~~~~~~~~~s~~sq~ka~~aA~~   41 (79)
                      |+||||+.++|+||.+++++.+++.++   ||++.++.+|+
T Consensus         1 MtRGnQr~~aRekn~Kk~~~~~~k~~~---s~l~~~~~~l~   38 (38)
T PF04419_consen    1 MTRGNQREQAREKNQKKQAKQKKKGGK---SGLKAAQRALN   38 (38)
T ss_dssp             ---SGGGTTTSTTT---SS---SS-SS----SS----TT--
T ss_pred             CccHhHHHHHHHHHHHHhhccccCCCc---cchhHHHHhcC
Confidence            999999999999999999776555555   89999888764

Although the function of these proteins is unknown, they are found to be ubiquitously expressed [].; PDB: 1WVK_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.24  E-value=0.0001  Score=36.40  Aligned_cols=23  Identities=22%  Similarity=0.634  Sum_probs=21.4

Q ss_pred             ccchhhhhcCCChhhHhHHHHcC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      +.|.||..+|.++.+|.+|+.++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57999999999999999999876

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.09  E-value=0.00019  Score=34.01  Aligned_cols=24  Identities=21%  Similarity=0.609  Sum_probs=20.1

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      ++|++|..+|.+...|..|....|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            589999999999999999998765

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.90  E-value=0.00031  Score=34.00  Aligned_cols=22  Identities=18%  Similarity=0.545  Sum_probs=20.5

Q ss_pred             ccchhhhhcCCChhhHhHHHHc
Q psy11933         42 HACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      |+|++|...|.+...|..|...
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            6899999999999999999876

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.42  E-value=0.0016  Score=32.57  Aligned_cols=25  Identities=12%  Similarity=0.343  Sum_probs=22.5

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      +.|.+|..+|.+...|..|-...|+
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhcC
Confidence            6899999999999999999976665

>smart00355 ZnF_C2H2 zinc finger

Probab=95.51  E-value=0.0076  Score=28.33  Aligned_cols=24  Identities=21%  Similarity=0.490  Sum_probs=21.2

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      +.|++|..+|.....|..|.. .|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~-~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR-THX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH-Hhc
Confidence            579999999999999999998 554

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.43  E-value=0.0042  Score=31.45  Aligned_cols=23  Identities=26%  Similarity=0.550  Sum_probs=21.5

Q ss_pred             ccchhhhhcCCChhhHhHHHHcC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      +.|.+|.-.|.+...|.+|..+|
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            68999999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.20  E-value=0.01  Score=35.96  Aligned_cols=28  Identities=25%  Similarity=0.610  Sum_probs=21.9

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      .+|++|...+.....|+.|.|..|-+.|
T Consensus        25 atCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   25 ATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCcchhhccchhhHHHHHHHHhcccC
Confidence            5899999999999999999999996653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.14  E-value=0.0088  Score=31.14  Aligned_cols=24  Identities=21%  Similarity=0.506  Sum_probs=22.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      .+.|.+|...|.+...+..|..++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChH
Confidence            478999999999999999999987

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4488|consensus

Probab=94.89  E-value=0.033  Score=35.30  Aligned_cols=26  Identities=31%  Similarity=0.385  Sum_probs=20.9

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcC
Q psy11933          1 MARGQQKLQSQAKAQEKQAKAKKQQG   26 (79)
Q Consensus         1 M~rG~qK~q~q~r~~~k~~~~~~~~~   26 (79)
                      |+||||.--++++|.++.+...++..
T Consensus         1 MtRGNQRdLaRqKN~KK~~d~~K~kr   26 (70)
T KOG4488|consen    1 MTRGNQRDLARQKNMKKQQDIAKGKR   26 (70)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhccc
Confidence            99999988779999999885554433

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=94.14  E-value=0.025  Score=34.27  Aligned_cols=30  Identities=20%  Similarity=0.503  Sum_probs=24.0

Q ss_pred             hccchhhhhcCCChhhHhHHHHcC-CCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENK-HPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esK-HpK~~~   70 (79)
                      .+.|.+|...|.+...|.+|..++ |.+...
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~H~~~~~   80 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKHHKKRNS   80 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTTTTC-S-
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCccCCCccc
Confidence            589999999999999999999988 655433

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=93.69  E-value=0.05  Score=31.47  Aligned_cols=28  Identities=18%  Similarity=0.373  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      .|.||.|.. -.+...|..|.+..|+...
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~   29 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSES   29 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCC
Confidence            488999999 6778899999999998653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=93.64  E-value=0.039  Score=32.05  Aligned_cols=32  Identities=22%  Similarity=0.415  Sum_probs=28.0

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCCCCCCCch
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHPKNDLPED   73 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~e   73 (79)
                      ++|+-|...|...+.|..|..+.|--.+|--|
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            68999999999999999999988877776544

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=92.52  E-value=0.033  Score=27.12  Aligned_cols=24  Identities=25%  Similarity=0.596  Sum_probs=19.5

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      |.|+.|--... +..|..|....||
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            57999998887 9999999998886

>KOG1842|consensus

Probab=91.60  E-value=0.1  Score=43.14  Aligned_cols=29  Identities=21%  Similarity=0.560  Sum_probs=26.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      .|.||||+.-|++...|..|++.-|+-+.
T Consensus        15 gflCPiC~~dl~~~~~L~~H~d~eH~~ed   43 (505)
T KOG1842|consen   15 GFLCPICLLDLPNLSALNDHLDVEHFEED   43 (505)
T ss_pred             cccCchHhhhhhhHHHHHHHHhhhccccc
Confidence            48999999999999999999999998654

>PHA02768 hypothetical protein; Provisional

Probab=91.34  E-value=0.14  Score=30.97  Aligned_cols=26  Identities=23%  Similarity=0.428  Sum_probs=23.6

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      +.|.|++|...|.....|..|... |.
T Consensus         4 ~~y~C~~CGK~Fs~~~~L~~H~r~-H~   29 (55)
T PHA02768          4 LGYECPICGEIYIKRKSMITHLRK-HN   29 (55)
T ss_pred             cccCcchhCCeeccHHHHHHHHHh-cC
Confidence            568999999999999999999997 55

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=89.38  E-value=0.11  Score=31.37  Aligned_cols=26  Identities=23%  Similarity=0.556  Sum_probs=0.0

Q ss_pred             cchhhhhcCCChhhHhHHHHcCCCCC
Q psy11933         43 ACVVCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        43 ~C~vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      .|.+|...|.+...|.+|....|.-.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~   26 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD   26 (100)
T ss_dssp             --------------------------
T ss_pred             Cccccccccccccccccccccccccc
Confidence            59999999999999999999999643

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=89.20  E-value=0.23  Score=25.44  Aligned_cols=20  Identities=20%  Similarity=0.519  Sum_probs=16.6

Q ss_pred             ccchhhhhcCCChhhHhHHHH
Q psy11933         42 HACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      +.||||.+.+ ....+..|.+
T Consensus         2 v~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHH
Confidence            5799999998 6677888877

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF04780 DUF629: Protein of unknown function (DUF629); InterPro: IPR006865 This domain represents a region of several plant proteins of unknown function

Probab=88.37  E-value=0.23  Score=40.70  Aligned_cols=32  Identities=28%  Similarity=0.628  Sum_probs=27.3

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCCCCCCCchh
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHPKNDLPEDL   74 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~e~   74 (79)
                      -+|++|-..|++...+..|.+++|+-. ++|.+
T Consensus        58 WiCp~CskkF~d~~~~~~H~~~eH~~~-l~P~l   89 (466)
T PF04780_consen   58 WICPRCSKKFSDAESCLSHMEQEHPAG-LKPKL   89 (466)
T ss_pred             eeCCcccceeCCHHHHHHHHHHhhhhh-cChhh
Confidence            469999999999999999999999865 44444

A C2H2 zinc finger is predicted in this region in some family members, but the spacing between the cysteine residues is not conserved throughout the family.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=88.30  E-value=0.27  Score=24.84  Aligned_cols=20  Identities=20%  Similarity=0.669  Sum_probs=16.7

Q ss_pred             ccchhhhhcCCChhhHhHHHH
Q psy11933         42 HACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      +.|++|..+| .+..|..|..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            5799999999 7778888864

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=86.69  E-value=0.32  Score=28.03  Aligned_cols=24  Identities=21%  Similarity=0.617  Sum_probs=19.8

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      .+++||||-..+.+  .|..|+...|
T Consensus        30 ~~v~CPiC~~~~~~--~l~~Hl~~~H   53 (54)
T PF05605_consen   30 KNVVCPICSSRVTD--NLIRHLNSQH   53 (54)
T ss_pred             CCccCCCchhhhhh--HHHHHHHHhc
Confidence            46999999987664  8899998877

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=85.89  E-value=0.63  Score=29.39  Aligned_cols=24  Identities=25%  Similarity=0.419  Sum_probs=14.5

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      +.|.+|...|.....|..|....|
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H   25 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNH   25 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhccc
Confidence            456666666666666666665434

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=85.88  E-value=0.34  Score=26.47  Aligned_cols=26  Identities=27%  Similarity=0.585  Sum_probs=19.9

Q ss_pred             hccchhhhhcCCC----hhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPD----PKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~----~k~l~~H~esKHp   66 (79)
                      ...|..|...+..    -..|..|...+||
T Consensus        16 ~a~C~~C~~~~~~~~~~ts~l~~HL~~~hp   45 (45)
T PF02892_consen   16 KAKCKYCGKVIKYSSGGTSNLKRHLKKKHP   45 (45)
T ss_dssp             -EEETTTTEE-----SSTHHHHHHHHHTTH
T ss_pred             eEEeCCCCeEEeeCCCcHHHHHHhhhhhCc
Confidence            4689999999887    5899999999997

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PHA00733 hypothetical protein

Probab=84.65  E-value=0.59  Score=31.67  Aligned_cols=21  Identities=24%  Similarity=0.539  Sum_probs=12.3

Q ss_pred             ccchhhhhcCCChhhHhHHHH
Q psy11933         42 HACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      +.|+.|...|.....|..|..
T Consensus        74 y~C~~Cgk~Fss~s~L~~H~r   94 (128)
T PHA00733         74 YVCPLCLMPFSSSVSLKQHIR   94 (128)
T ss_pred             ccCCCCCCcCCCHHHHHHHHh
Confidence            556666666666555555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	79
1wvk_A	86	AT2G23090/F21P24.15; structural genomics, protein	99.86
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	98.61
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	98.38
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	96.28
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	96.24
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	96.11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.02
1paa_A	30	Yeast transcription factor ADR1; transcription reg	95.96
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.96
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	95.96
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	95.93
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	95.89
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	95.89
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	95.89
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	95.88
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	95.81
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.8
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.79
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.79
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	95.78
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.77
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	95.77
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.76
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.74
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.73
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	95.73
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	95.72
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.72
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.71
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.71
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	95.68
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	95.68
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	95.68
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	95.65
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.65
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.65
1ard_A	29	Yeast transcription factor ADR1; transcription reg	95.64
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	95.64
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.64
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.64
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.62
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.6
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	95.6
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.57
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.57
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.56
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.56
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.56
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	95.56
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	95.55
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	95.54
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.53
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.53
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	95.53
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.51
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.51
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	95.51
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.51
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	95.5
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.5
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.47
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.46
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.45
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	95.45
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	95.44
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.44
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.44
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	95.42
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	95.42
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	95.41
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	95.41
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	95.4
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	95.38
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.37
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	95.36
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	95.36
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.34
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	95.33
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.33
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	95.32
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	95.32
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.31
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.31
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.31
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	95.29
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	95.29
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	95.29
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	95.28
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.27
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.25
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	95.25
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.25
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.25
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	95.25
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	95.25
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	95.24
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	95.23
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.22
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	95.21
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	95.2
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.18
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.18
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.18
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	95.17
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.17
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	94.15
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	95.15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	95.14
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.14
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.12
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	95.11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.1
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.1
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.09
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	95.09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	95.06
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	95.06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	95.04
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	95.03
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.03
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	94.97
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	94.91
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	94.87
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.86
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.81
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.81
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	94.79
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	93.8
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	94.74
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	93.75
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.74
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	94.68
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.65
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	94.64
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.61
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	94.58
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.58
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.58
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	94.51
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.42
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.38
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	94.34
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.24
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	94.23
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	94.22
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	94.19
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.16
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.12
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	94.12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	94.1
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	94.08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	94.03
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	94.02
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.99
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	93.99
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	93.86
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	93.65
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	93.63
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	93.57
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	93.45
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	93.31
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	93.29
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	93.28
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	93.25
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	93.24
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	93.13
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	92.95
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	92.84
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	92.68
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	92.66
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	92.62
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	92.45
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	92.24
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	92.18
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	92.11
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	92.06
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	91.97
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	91.89
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	91.71
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	91.6
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	91.56
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	91.5
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	91.48
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	91.45
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	91.41
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	91.36
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	91.01
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	90.79
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	90.69
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	90.69
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	90.59
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	90.54
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	90.46
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	90.2
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	90.17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	89.91
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	89.82
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	89.64
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	89.18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	88.95
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	88.76
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	88.59
2epa_A	72	Krueppel-like factor 10; transforming growth facto	88.28
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.27
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	88.15
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	88.02
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	87.8
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	87.6
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	87.29
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	86.97
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	86.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	86.42
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	85.89
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	85.79
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	85.75
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	85.58
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	84.85
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	84.81
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	83.61
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	82.79
2ct5_A	73	Zinc finger BED domain containing protein 1; DREF	82.57
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	82.55
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	82.47
3vhs_A	29	ATPase wrnip1; zinc finger, ubiquitin-binding doma	82.45
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	82.13
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	81.4
3iyl_X	1214	VP3; non-enveloped virus, membrane penetration pro	80.84
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	80.73
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	80.38

>1wvk_A AT2G23090/F21P24.15; structural genomics, protein structure initiative, cell free, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: g.82.1.1

Probab=99.86  E-value=3.7e-25  Score=143.06  Aligned_cols=70  Identities=30%  Similarity=0.389  Sum_probs=56.4

Q ss_pred             cchH-HHH-HHHHHHHHHHHHHHhhcCCChhhHHHHHHhhhhccchhhhhcCCC---hhhHhHHHHcCCCCCCCCchhhh
Q psy11933          2 ARGQ-QKL-QSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPD---PKTYKQHFENKHPKNDLPEDLKD   76 (79)
Q Consensus         2 ~rG~-qK~-q~q~r~~~k~~~~~~~~~~s~~sq~ka~~aA~~~~C~vC~~~f~~---~k~l~~H~esKHpK~~~p~e~~~   76 (79)
                      |+|| +|+ |+|+||++++++   +..+   |||++|++|++|+|+|||++||.   +++|++||||||||++|+++|-+
T Consensus        10 ~~~Ng~ka~qareRNakk~~~---~~kk---SQlkan~~A~~i~C~VCr~tFm~t~~~~~L~~H~e~KHpK~~~~eCFP~   83 (86)
T 1wvk_A           10 GGGNAQKSAMARAKNLEKAKA---AGKG---SQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPH   83 (86)
T ss_dssp             SCCCSGGGTTTSTTTCCCSSS---SCSS---CSSCCCCTTCCEEETTTTEEECCSSCSHHHHHHHHTCCSCCGGGTTSGG
T ss_pred             CCccHHHHHHHHHHHHHhccc---ccch---hhHHHHHHhhCCCChHhHhhHHhcCChHHHHHHHHcCCCCCCHHHHCcC
Confidence            4566 887 666766664431   1223   89999999999999999997776   99999999999999999998865


Q ss_pred             h
Q psy11933         77 V   77 (79)
Q Consensus        77 ~   77 (79)
                      +
T Consensus        84 ~   84 (86)
T 1wvk_A           84 L   84 (86)
T ss_dssp             G
T ss_pred             C
Confidence            4

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=98.61  E-value=8.1e-09  Score=54.37  Aligned_cols=24  Identities=29%  Similarity=0.469  Sum_probs=22.0

Q ss_pred             hhccchhhhhcCCChhhHhHHHHc
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .+++|+||++++||+++|++|||.
T Consensus         2 ~k~~CpvCk~q~Pd~kt~~~H~e~   25 (28)
T 2jvx_A            2 SDFCCPKCQYQAPDMDTLQIHVME   25 (28)
T ss_dssp             CCEECTTSSCEESSHHHHHHHHHH
T ss_pred             CcccCccccccCcChHHHHHHHHH
Confidence            368999999999999999999983

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=98.38  E-value=6.6e-08  Score=52.76  Aligned_cols=27  Identities=19%  Similarity=0.443  Sum_probs=25.3

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      |+|++|+..|.++..|..|||++|+-.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            899999999999999999999999743

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=96.28  E-value=0.0017  Score=29.70  Aligned_cols=26  Identities=31%  Similarity=0.612  Sum_probs=22.8

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      |.|++|...|.....|..|....|..
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHccC
Confidence            78999999999999999998876543

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.24  E-value=0.0034  Score=31.43  Aligned_cols=30  Identities=23%  Similarity=0.354  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2yte_A           10 PYSCAECKETFSDNNRLVQHQKMHTVKSGP   39 (42)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHTSCCSSC
T ss_pred             CeECCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998864333343

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.11  E-value=0.0026  Score=32.60  Aligned_cols=31  Identities=10%  Similarity=0.005  Sum_probs=25.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDLP   71 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p   71 (79)
                      .|.|++|...|.....|..|...-+...+|+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A           12 PYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            4899999999999999999998655555554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.02  E-value=0.0047  Score=31.65  Aligned_cols=30  Identities=10%  Similarity=0.132  Sum_probs=24.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2emg_A           12 PFICSECGKVFTHKTNLIIHQKIHTGERPS   41 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHTTTSCCCCS
T ss_pred             CEECCccCcccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998764444444

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.96  E-value=0.0044  Score=28.53  Aligned_cols=27  Identities=19%  Similarity=0.375  Sum_probs=22.8

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      .|.|++|...|.....|..|....|..
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            378999999999999999996556653

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.96  E-value=0.0054  Score=31.53  Aligned_cols=30  Identities=17%  Similarity=0.295  Sum_probs=24.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|.+|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enh_A           12 PYECDVCRKAFSHHASLTQHQRVHSGEKPS   41 (46)
T ss_dssp             SCBCTTTCCBCSSSHHHHHHGGGSCCSCCC
T ss_pred             CcCCCCcCchhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998864444444

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.96  E-value=0.0017  Score=36.24  Aligned_cols=32  Identities=19%  Similarity=0.402  Sum_probs=25.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCCCc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDLPE   72 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~   72 (79)
                      .|.|++|...|.....|..|....|...+.|.
T Consensus        37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p~   68 (70)
T 1x5w_A           37 PFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS   68 (70)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHSSSCCSS
T ss_pred             CEeCCCCCCccCCHHHHHHHHHHHhCCCCCCC
Confidence            37888888888888888888887777666654

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.93  E-value=0.0044  Score=31.00  Aligned_cols=30  Identities=10%  Similarity=0.146  Sum_probs=24.0

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        11 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A           11 PYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             SBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             CeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998754333333

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.89  E-value=0.0036  Score=35.45  Aligned_cols=30  Identities=13%  Similarity=0.339  Sum_probs=24.6

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      ..|.|++|...|.....|..|....|+...
T Consensus        44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A           44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             SSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            348899999999888889999888887654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.89  E-value=0.0066  Score=30.98  Aligned_cols=30  Identities=10%  Similarity=0.171  Sum_probs=24.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eq4_A           12 LYNCKECGKSFSRAPCLLKHERLHSGEKPS   41 (46)
T ss_dssp             CCCBTTTTBCCSCHHHHHHHHHHCCSSSCC
T ss_pred             CeECCCCCCccCchHHHHHHHHhcCCCCCC
Confidence            489999999999999999998764444444

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=95.89  E-value=0.0048  Score=30.66  Aligned_cols=30  Identities=13%  Similarity=0.337  Sum_probs=24.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus         6 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            6 SYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             ceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            489999999999999999998764433343

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.88  E-value=0.0028  Score=37.98  Aligned_cols=35  Identities=14%  Similarity=0.233  Sum_probs=29.4

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCCCchh
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDLPEDL   74 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~e~   74 (79)
                      ..|.|.+|...|.....|..|....|...+++++.
T Consensus        53 ~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~~   87 (98)
T 2gqj_A           53 DALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEA   87 (98)
T ss_dssp             HHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCCC
T ss_pred             CCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            45999999999999999999999888766665543

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.81  E-value=0.0057  Score=30.84  Aligned_cols=25  Identities=16%  Similarity=0.254  Sum_probs=22.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      .|.|++|...|.....|..|... |.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~-H~   36 (44)
T 2en7_A           12 PYVCNECGKAFRSKSYLIIHTRT-HT   36 (44)
T ss_dssp             SSCCTTTCCCCSSHHHHHHHHTT-TC
T ss_pred             CeECCCCCCccCCHHHHHHHhhh-cC
Confidence            48999999999999999999865 53

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.80  E-value=0.0043  Score=30.21  Aligned_cols=25  Identities=24%  Similarity=0.628  Sum_probs=22.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      .|.|.+|...|.....|..|...-+
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            9 SYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHHHc
Confidence            4899999999999999999987644

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=95.79  E-value=0.004  Score=29.78  Aligned_cols=25  Identities=16%  Similarity=0.433  Sum_probs=22.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      .|.|.+|...|.....|..|...-+
T Consensus         7 ~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            7 GYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CeECCCCcchhCCHHHHHHHHHHHc
Confidence            4899999999999999999988643

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.79  E-value=0.0056  Score=31.47  Aligned_cols=30  Identities=13%  Similarity=0.280  Sum_probs=24.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|.+|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en9_A           12 LFKCNECKKTFTQSSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHTSSCCC
T ss_pred             CEECCccCcccCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998864444444

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.78  E-value=0.0059  Score=30.89  Aligned_cols=30  Identities=10%  Similarity=0.205  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eoj_A           12 PYECCECGKVFSRKDQLVSHQKTHSGQSGP   41 (44)
T ss_dssp             SCEETTTTEECSSHHHHHHHHTTSSSSCSC
T ss_pred             CeeCCCCCCccCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998753333333

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.77  E-value=0.0059  Score=31.18  Aligned_cols=30  Identities=13%  Similarity=0.155  Sum_probs=24.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep1_A           12 PYECSDCGKSFIKKSQLHVHQRIHTGENPS   41 (46)
T ss_dssp             SSCCSSSCCCCSSHHHHHHHHGGGSSSCCC
T ss_pred             CcCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999999875444444

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.77  E-value=0.0045  Score=31.16  Aligned_cols=30  Identities=17%  Similarity=0.331  Sum_probs=24.0

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        11 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A           11 PYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            489999999999999999998754443333

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.76  E-value=0.0072  Score=30.94  Aligned_cols=31  Identities=10%  Similarity=0.081  Sum_probs=24.5

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq1_A           11 KPYKCNECGKAFRAHSNLTTHQVIHTGEKPS   41 (46)
T ss_dssp             CCCCCTTTTCCCSSHHHHHHHHTTTCCSCCS
T ss_pred             CCeECCcCChhhCCHHHHHHHHHHhCCCCCC
Confidence            3489999999999999999998754333343

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.74  E-value=0.005  Score=31.57  Aligned_cols=30  Identities=13%  Similarity=0.169  Sum_probs=24.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emi_A           12 HYECSECGKAFIQKSTLSMHQRIHRGEKPS   41 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHGGGCSCCCC
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHhCCCCCC
Confidence            489999999999999999998764444444

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.73  E-value=0.007  Score=30.88  Aligned_cols=30  Identities=13%  Similarity=0.158  Sum_probs=24.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq3_A           12 PYECNQCGKAFSVRSSLTTHQAIHTGKKPS   41 (46)
T ss_dssp             SSEETTTTEECSSHHHHHHHHTTSCCCCCC
T ss_pred             CeECCCCChhhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998764444444

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.73  E-value=0.0073  Score=30.82  Aligned_cols=30  Identities=17%  Similarity=0.191  Sum_probs=24.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eop_A           12 PHECRECGKSFSFNSQLIVHQRIHTGENPS   41 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHTTTTTSCCS
T ss_pred             CeeCCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998763333343

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.72  E-value=0.0048  Score=34.87  Aligned_cols=33  Identities=24%  Similarity=0.474  Sum_probs=28.6

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCCCc
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDLPE   72 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~   72 (79)
                      ..|.|++|...|.....|..|....|+.....+
T Consensus        37 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A           37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             cccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            459999999999999999999999998775543

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.72  E-value=0.0063  Score=31.15  Aligned_cols=30  Identities=10%  Similarity=0.205  Sum_probs=24.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoq_A           12 PFKCDICGKSFCGRSRLNRHSMVHTAEKPS   41 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHHHTTCCCSS
T ss_pred             CcCCCcCCchhCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998864444444

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.71  E-value=0.0063  Score=31.15  Aligned_cols=30  Identities=10%  Similarity=0.112  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enf_A           12 PYKCNECGKVFTQNSHLVRHRGIHTGEKPS   41 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHTTTTTSSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHhhCCCCCC
Confidence            489999999999999999998653333343

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.71  E-value=0.0071  Score=30.86  Aligned_cols=30  Identities=10%  Similarity=0.180  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytr_A           12 PYKCNECGKAFSQTSKLARHQRIHTGEKPS   41 (46)
T ss_dssp             TTCCTTTCCCCSSHHHHHHHHTTTTTCSCC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            489999999999999999998764444444

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.68  E-value=0.0059  Score=30.80  Aligned_cols=30  Identities=10%  Similarity=0.185  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eof_A           12 PYECNECQKAFNTKSNLMVHQRTHTGESGP   41 (44)
T ss_dssp             SEECTTTCCEESCHHHHHHHHHHTTTSSCS
T ss_pred             CeECCCCCcccCCHhHHHHHHHHhCCCCCC
Confidence            489999999999999999999764433333

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.68  E-value=0.0049  Score=31.29  Aligned_cols=30  Identities=17%  Similarity=0.244  Sum_probs=24.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2yu5_A           12 PFKCSKCDRVFTQRNYLVQHERTHARKSGP   41 (44)
T ss_dssp             SEECSSSSCEESSSHHHHHHHHHCCCCCSS
T ss_pred             CeECCCCCchhCCHHHHHHHhHhcCCCCCC
Confidence            489999999999999999999875444444

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=95.68  E-value=0.0055  Score=30.71  Aligned_cols=30  Identities=10%  Similarity=0.171  Sum_probs=24.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2el5_A           10 PYECSECGKAFNRKDQLISHQRTHAGESGP   39 (42)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGCCCCSC
T ss_pred             CccCCCcChhhCCHHHHHHHHHhcCCCCCC
Confidence            489999999999999999998764444444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=95.65  E-value=0.0057  Score=30.55  Aligned_cols=30  Identities=10%  Similarity=0.126  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        11 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A           11 PYLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             CeECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            489999999999999999998764444443

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.65  E-value=0.0058  Score=31.51  Aligned_cols=31  Identities=16%  Similarity=0.186  Sum_probs=24.5

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eon_A           11 KPYKCQVCGKAFRVSSHLVQHHSVHSGERPS   41 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHTTTTTSCCSC
T ss_pred             cccCCCCCCcccCcHHHHHHHHHhcCCCCCC
Confidence            3489999999999999999998753333444

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.65  E-value=0.008  Score=30.65  Aligned_cols=30  Identities=10%  Similarity=0.105  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoe_A           12 PYKCNECGKVFTQNSHLANHQRIHTGVKPS   41 (46)
T ss_dssp             SSEETTTTEECSSHHHHHHHHGGGSCCCSC
T ss_pred             CeECCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998754444444

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=95.64  E-value=0.0055  Score=27.85  Aligned_cols=23  Identities=22%  Similarity=0.612  Sum_probs=20.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRS   24 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHHH
Confidence            37899999999999999999875

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.64  E-value=0.0081  Score=30.72  Aligned_cols=31  Identities=16%  Similarity=0.232  Sum_probs=24.6

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epz_A           11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPS   41 (46)
T ss_dssp             CSBCCTTTCCCBSSHHHHHHHHTTTTTCCCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHhCCCCCC
Confidence            3489999999999999999998754433343

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.64  E-value=0.007  Score=31.07  Aligned_cols=30  Identities=13%  Similarity=0.282  Sum_probs=23.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em6_A           12 CYKCDVCGKEFSQSSHLQTHQRVHTGEKPS   41 (46)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHTTTSSSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999997653333343

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.64  E-value=0.007  Score=31.07  Aligned_cols=30  Identities=13%  Similarity=0.186  Sum_probs=24.8

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoh_A           12 PYECKECRKTFIQIGHLNQHKRVHTGERSS   41 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHHHCSSCCSC
T ss_pred             CcCCCCcCchhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998864444444

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.62  E-value=0.0048  Score=31.74  Aligned_cols=30  Identities=17%  Similarity=0.229  Sum_probs=24.8

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoz_A           12 PYSCNVCGKAFVLSAHLNQHLRVHTQETLS   41 (46)
T ss_dssp             SEEETTTTEEESSHHHHHHHHHHHSSCCSS
T ss_pred             CeECcccChhhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998865444444

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.60  E-value=0.0098  Score=30.40  Aligned_cols=30  Identities=10%  Similarity=0.127  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytn_A           12 PYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHGGGTSCCCCC
T ss_pred             CeECCCCCCeeCCHHHHHHHhhhcCCCCCC
Confidence            489999999999999999998764444444

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.60  E-value=0.0057  Score=31.23  Aligned_cols=30  Identities=10%  Similarity=0.206  Sum_probs=24.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytf_A           12 PFECSECQKAFNTKSNLIVHQRTHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHTSCSSSSS
T ss_pred             CcCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998864444444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.57  E-value=0.0049  Score=31.61  Aligned_cols=31  Identities=16%  Similarity=0.267  Sum_probs=25.2

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em3_A           11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKPS   41 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHCCCCCC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3489999999999999999999874444444

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.57  E-value=0.0076  Score=30.84  Aligned_cols=30  Identities=10%  Similarity=0.189  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq2_A           12 PYQCNECGKAFSQTSKLARHQRVHTGEKPS   41 (46)
T ss_dssp             SSSCCSSCCCCSSHHHHHHHGGGGCCCCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998764443444

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.56  E-value=0.0057  Score=31.34  Aligned_cols=30  Identities=13%  Similarity=0.195  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ep3_A           12 PYRCAECGKAFTDRSNLFTHQKIHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTTTSCCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998754444444

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.56  E-value=0.0059  Score=31.36  Aligned_cols=30  Identities=13%  Similarity=0.153  Sum_probs=24.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytp_A           12 HYECSECGKAFARKSTLIMHQRIHTGEKPS   41 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTTTSCCCCC
T ss_pred             CeECCcCCcccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998764444444

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.56  E-value=0.0074  Score=30.89  Aligned_cols=30  Identities=10%  Similarity=0.127  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yti_A           12 PYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             TTCCSSSCCCCSSHHHHHHHHTTTSCSCCS
T ss_pred             CeECCCCCcccCChhHHHHHhHhcCCCCCC
Confidence            489999999999999999998653333344

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=95.56  E-value=0.0061  Score=27.43  Aligned_cols=22  Identities=14%  Similarity=0.388  Sum_probs=20.2

Q ss_pred             ccchhhhhcCCChhhHhHHHHc
Q psy11933         42 HACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      |.|.+|...|.....|..|...
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~   23 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRV   23 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             ccCCCCCCcCCCHHHHHHHHHH
Confidence            7899999999999999999864

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.55  E-value=0.0062  Score=30.46  Aligned_cols=30  Identities=13%  Similarity=0.174  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (41)
T 2ept_A           10 VYECQECGKSFRQKGSLTLHERIHTGSGPS   39 (41)
T ss_dssp             CEECSSSCCEESSHHHHHHHGGGCCCCSCS
T ss_pred             CeECCCCCCCcCCHHHHHHHHHHhCCCCCc
Confidence            489999999999999999998754333333

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.54  E-value=0.0083  Score=30.79  Aligned_cols=31  Identities=10%  Similarity=0.168  Sum_probs=24.4

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytq_A           11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPS   41 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHTTTCCSCSS
T ss_pred             CCcCCCccChhhCChHHHHHHHHHhCCCCCC
Confidence            3489999999999999999998763333333

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.53  E-value=0.0077  Score=30.90  Aligned_cols=30  Identities=10%  Similarity=0.212  Sum_probs=24.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yth_A           12 PFQCEECGKRFTQNSHLHSHQRVHTGEKPS   41 (46)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHGGGGTTCCCS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            489999999999999999998764444444

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.53  E-value=0.0062  Score=31.39  Aligned_cols=31  Identities=16%  Similarity=0.223  Sum_probs=25.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDLP   71 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p   71 (79)
                      .|.|++|...|.....|..|...-+...+|.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eom_A           12 GHRCSDCGKFFLQASNFIQHRRIHTGEKPSG   42 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHHHHSSCCCSS
T ss_pred             CcCCCCCCCeeCChHHHHHHHHHhCCCCCCC
Confidence            4899999999999999999988644444543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=95.53  E-value=0.0064  Score=29.50  Aligned_cols=26  Identities=15%  Similarity=0.310  Sum_probs=22.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      .|.|++|...|.....|..|...-..
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~   27 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHEL   27 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTT
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCC
Confidence            37899999999999999999875333

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.51  E-value=0.0063  Score=31.15  Aligned_cols=30  Identities=17%  Similarity=0.266  Sum_probs=24.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eml_A           12 PYECSVCGKAFSHRQSLSVHQRIHSGKKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGSSCCCS
T ss_pred             CeeCCCcCCccCCHHHHHHHHHHhcCCCCC
Confidence            489999999999999999998764444444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.51  E-value=0.0069  Score=30.91  Aligned_cols=30  Identities=10%  Similarity=0.128  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eov_A           12 PYKCSDCGKSFTWKSRLRIHQKCHTGERHS   41 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHHHHSCCSSC
T ss_pred             CccCCccChhhCCHHHHHHHHHhcCCCCCC
Confidence            489999999999999999998754444444

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.51  E-value=0.0057  Score=37.25  Aligned_cols=34  Identities=18%  Similarity=0.215  Sum_probs=25.2

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCCCch
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDLPED   73 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~e   73 (79)
                      ..|.|.+|...|.....|..|....|...+|.++
T Consensus        61 k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           61 EMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             CCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            3478888888888888888885556766665443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.51  E-value=0.0067  Score=31.05  Aligned_cols=30  Identities=10%  Similarity=0.233  Sum_probs=24.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep2_A           12 PYECSICGKSFTKKSQLHVHQQIHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHTTSSCCSC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999999854444444

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.50  E-value=0.0071  Score=30.91  Aligned_cols=30  Identities=10%  Similarity=0.148  Sum_probs=24.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (45)
T 2epu_A           12 PFECTHCGKSFRAKGNLVTHQRIHTGEKSG   41 (45)
T ss_dssp             SEEETTTTEEESSHHHHHHHHTTTSSCCCC
T ss_pred             CccCCCCCCccCChHHHHHHHHHhCCCCCC
Confidence            489999999999999999998754444444

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.50  E-value=0.0071  Score=30.96  Aligned_cols=30  Identities=10%  Similarity=0.213  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en1_A           12 PFKCEECGKRFTQNSQLHSHQRVHTGEKPS   41 (46)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGGSCCCCS
T ss_pred             CeeCCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998764444444

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.47  E-value=0.0057  Score=31.23  Aligned_cols=30  Identities=10%  Similarity=0.152  Sum_probs=24.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eow_A           12 PYKCNECGKAFRARSSLAIHQATHSGEKPS   41 (46)
T ss_dssp             CEECTTSCCEESSHHHHHHHHHHHCCCSCS
T ss_pred             CeeccccCChhcCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998764444444

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.46  E-value=0.0076  Score=30.84  Aligned_cols=30  Identities=10%  Similarity=0.089  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ysp_A           12 PYKCEKCGKGYNSKFNLDMHQKVHTGERPS   41 (46)
T ss_dssp             SEEETTTTEEESCHHHHHHHHTTSCSCCSS
T ss_pred             CeECCCCCCccCCHHHHHHHHHhhCCCCCC
Confidence            489999999999999999998764433443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.45  E-value=0.0078  Score=30.79  Aligned_cols=31  Identities=10%  Similarity=0.064  Sum_probs=24.4

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq0_A           11 KPYKCHECGKVFRRNSHLARHQLIHTGEKPS   41 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHTTTCCCCCS
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            3489999999999999999998763333343

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=95.45  E-value=0.0051  Score=27.87  Aligned_cols=22  Identities=23%  Similarity=0.452  Sum_probs=20.2

Q ss_pred             ccchhhhhcCCChhhHhHHHHc
Q psy11933         42 HACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      +.|++|...|.....|..|...
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRI   24 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHHHH
Confidence            7899999999999999999864

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.44  E-value=0.0046  Score=31.42  Aligned_cols=30  Identities=13%  Similarity=0.153  Sum_probs=24.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eox_A           12 SYNCNECGKAFTRIFHLTRHQKIHTRKSGP   41 (44)
T ss_dssp             CEEETTTTEEESSSHHHHTTHHHHCCCCCC
T ss_pred             CeECcccCcccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998865444444

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.44  E-value=0.0066  Score=30.99  Aligned_cols=30  Identities=10%  Similarity=0.141  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~   41 (46)
T 2yts_A           12 PYICNECGKSFIQKSHLNRHRRIHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHGGGTSSCCSS
T ss_pred             CEECCCCChhhCChHHHHHHHHhcCCCCCc
Confidence            489999999999999999998753333343

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.44  E-value=0.0075  Score=30.76  Aligned_cols=30  Identities=13%  Similarity=0.153  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en8_A           12 SHTCDECGKNFCYISALRIHQRVHMGEKCS   41 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTCCSCSS
T ss_pred             CeECCCcCcccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998653333343

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=95.42  E-value=0.0061  Score=37.17  Aligned_cols=28  Identities=25%  Similarity=0.541  Sum_probs=21.8

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      .|.|++|...|.....|..|.+..||.+
T Consensus        56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           56 VFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             ccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            4778888888888888888887778754

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.42  E-value=0.0085  Score=30.37  Aligned_cols=30  Identities=23%  Similarity=0.295  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2emb_A           12 RYECSKCQATFNLRKHLIQHQKTHAAKSGP   41 (44)
T ss_dssp             SEECTTTCCEESCHHHHHHHGGGGCCCCCT
T ss_pred             CeECCCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            489999999999999999998764444443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=95.41  E-value=0.0073  Score=30.80  Aligned_cols=30  Identities=10%  Similarity=0.111  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2el4_A           12 PYGCSQCAKTFSLKSQLIVHQRSHTGVKPS   41 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHGGGSSSCCCS
T ss_pred             ceECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998764444444

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.41  E-value=0.0087  Score=31.16  Aligned_cols=31  Identities=16%  Similarity=0.238  Sum_probs=25.3

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|.+|...|.....|..|...-+...+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   41 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHhcCCCCCc
Confidence            3589999999999999999998865544444

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=95.40  E-value=0.0083  Score=31.73  Aligned_cols=24  Identities=17%  Similarity=0.433  Sum_probs=15.4

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      |.|++|...|.....|..|..+.|
T Consensus        30 ~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A           30 YHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             EECSSSSCEESSHHHHHHHHHSSS
T ss_pred             ccCCCCCchhcCHHHHHHHHHHhc
Confidence            566666666666666666665544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=95.38  E-value=0.0084  Score=30.66  Aligned_cols=30  Identities=10%  Similarity=0.219  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em0_A           12 TWKCRECDMCFSQASSLRLHQNVHVGEKPS   41 (46)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHGGGGSSSSCS
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCc
Confidence            489999999999999999998764333343

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=95.37  E-value=0.0085  Score=30.74  Aligned_cols=30  Identities=13%  Similarity=0.186  Sum_probs=24.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emk_A           12 PYECKECGKAFSQTTHLIQHQRVHTGEKPS   41 (46)
T ss_dssp             SCBCSSSCCBCSCHHHHHHHHHHHSSCCCS
T ss_pred             ceECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999999864444443

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.36  E-value=0.0091  Score=30.48  Aligned_cols=30  Identities=13%  Similarity=0.248  Sum_probs=25.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...++
T Consensus        10 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~   39 (45)
T 2epq_A           10 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGK   39 (45)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHHSCCCCC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHccCCCCC
Confidence            489999999999999999999875555444

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.36  E-value=0.0091  Score=30.34  Aligned_cols=30  Identities=10%  Similarity=0.162  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (44)
T 2eou_A           12 TSECQECGKIFRHSSLLIEHQALHAGESGP   41 (44)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHHTTSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHHCCCCCC
Confidence            489999999999999999998764444443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.34  E-value=0.0085  Score=30.55  Aligned_cols=30  Identities=10%  Similarity=0.091  Sum_probs=24.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eme_A           12 PYVCDYCGKAFGLSAELVRHQRIHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGCCCSCC
T ss_pred             CeECCCCChhhCCHHHHHHHHHhcCCCCCC
Confidence            489999999999999999998764444444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=95.33  E-value=0.0069  Score=32.02  Aligned_cols=32  Identities=19%  Similarity=0.390  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCCCc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDLPE   72 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~   72 (79)
                      .|.|.+|...|.....|..|....|.....+.
T Consensus         7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~~   38 (48)
T 3iuf_A            7 PYACDICGKRYKNRPGLSYHYAHSHLAEEEGE   38 (48)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHSSCC-----
T ss_pred             CEECCCcCcccCCHHHHHHHhhhhcCCCCCCC
Confidence            48999999999999999999985686655443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.33  E-value=0.0077  Score=30.90  Aligned_cols=30  Identities=13%  Similarity=0.218  Sum_probs=24.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emf_A           12 HFECTECGKAFTRKSTLSMHQKIHTGEKPS   41 (46)
T ss_dssp             CEECSSSCCEESCHHHHHHHGGGTSCSSCS
T ss_pred             CeECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998864444444

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=95.32  E-value=0.0079  Score=32.24  Aligned_cols=28  Identities=18%  Similarity=0.360  Sum_probs=20.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      .|.|++|...|.....|..|....|+..
T Consensus        30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A           30 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            3677888777777777777776667643

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.32  E-value=0.0097  Score=30.36  Aligned_cols=27  Identities=15%  Similarity=0.372  Sum_probs=23.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      .|.|++|...|.....|..|....|..
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~   38 (47)
T 2epx_A           12 PYECIECGKAFIQNTSLIRHWRYYHTG   38 (47)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHHTTTTTT
T ss_pred             CEECCccCchhCChHHHHHHhHhhcCC
Confidence            489999999999999999999855653

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.31  E-value=0.008  Score=30.74  Aligned_cols=30  Identities=10%  Similarity=0.084  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em7_A           12 PYKCEECGKGFICRRDLYTHHMVHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESCHHHHHHHGGGGTTCCCS
T ss_pred             CccCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998764443444

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.31  E-value=0.0076  Score=30.83  Aligned_cols=31  Identities=13%  Similarity=0.140  Sum_probs=24.4

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|.+|...|.....|..|...-+...+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep0_A           11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSSSCCC
T ss_pred             CCeeCcccCcccCChHHHHHHHHHhCCCCCC
Confidence            3589999999999999999998753333343

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.31  E-value=0.0084  Score=30.66  Aligned_cols=30  Identities=10%  Similarity=0.143  Sum_probs=24.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytj_A           12 PYICAECGKAFTIRSNLIKHQKIHTKQKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTSCCCCS
T ss_pred             CeECCCCChhhCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998764444444

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=95.29  E-value=0.0077  Score=30.91  Aligned_cols=31  Identities=13%  Similarity=0.221  Sum_probs=24.9

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ely_A           11 KPFKCVECGKGFSRRSALNVHHKLHTGEKPS   41 (46)
T ss_dssp             CSBCCSSSCCCBSSTTHHHHHHHHHSCCSSC
T ss_pred             CCcccCccCcccCCHHHHHHHHHHcCCCCCC
Confidence            3489999999999999999998864444444

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.29  E-value=0.0085  Score=34.59  Aligned_cols=28  Identities=18%  Similarity=0.393  Sum_probs=20.8

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      ..|.|++|...|.....|..|....|+.
T Consensus        64 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           64 KPYICQSCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             SSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred             CceECCCccchhCCHHHHHHHHHHhcCC
Confidence            3477888888888877788887777764

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.29  E-value=0.0095  Score=30.55  Aligned_cols=30  Identities=10%  Similarity=0.070  Sum_probs=24.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2elz_A           12 PYKCEDCGKGYNRRLNLDMHQRVHMGEKTS   41 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHGGGGGSCCCC
T ss_pred             CeeCcccCchhCCHHHHHHHHHhcCCCCCC
Confidence            489999999999999999998754444444

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.28  E-value=0.0074  Score=30.87  Aligned_cols=30  Identities=10%  Similarity=0.200  Sum_probs=24.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en6_A           12 PYGCNECGKTFSQKSILSAHQRTHTGEKPS   41 (46)
T ss_dssp             CEEETTTTEEESSHHHHHHHHHHHSSCCCS
T ss_pred             CeECCCCCcccCchHHHHHHHHHcCCCCCC
Confidence            489999999999999999999874444444

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.27  E-value=0.0087  Score=30.61  Aligned_cols=30  Identities=10%  Similarity=0.118  Sum_probs=24.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ene_A           12 PYKCNECGKVFRHNSYLSRHQRIHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTCCCCCC
T ss_pred             CeECCCCCchhCChHHHHHHHhhcCCCCCC
Confidence            489999999999999999998763333343

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.25  E-value=0.0076  Score=30.94  Aligned_cols=30  Identities=17%  Similarity=0.191  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC-CCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP-KNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp-K~~~   70 (79)
                      .|.|++|...|.....|..|...-.. ..+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoy_A           12 CFKCNKCEKTFSCSKYLTQHERIHTRGVKSG   42 (46)
T ss_dssp             CEECSSSCCEESSSHHHHHHHTTCCSCCTTS
T ss_pred             CEECcCCCCcCCCHHHHHHHHHHcCCCCCCC
Confidence            48999999999999999999865333 3444

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=95.25  E-value=0.0078  Score=27.30  Aligned_cols=23  Identities=26%  Similarity=0.570  Sum_probs=20.8

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~   25 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLET   25 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHT
T ss_pred             CccCCCCCcccCCHHHHHHHHHH
Confidence            37899999999999999999874

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.25  E-value=0.0079  Score=30.76  Aligned_cols=30  Identities=13%  Similarity=0.163  Sum_probs=24.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yso_A           12 SHQCRECGEIFFQYVSLIEHQVLHMGQKNS   41 (46)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHSCCSCC
T ss_pred             CEEccccChhhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998764444444

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.25  E-value=0.0081  Score=30.81  Aligned_cols=30  Identities=17%  Similarity=0.230  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em5_A           12 SHQCHECGRGFTLKSHLNQHQRIHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTSCSCCS
T ss_pred             CeECCcCCCccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998753333333

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.25  E-value=0.0088  Score=33.82  Aligned_cols=33  Identities=15%  Similarity=0.340  Sum_probs=25.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCCCch
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDLPED   73 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~e   73 (79)
                      .|.|++|...|.....|..|....|...+++.+
T Consensus        47 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A           47 AFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             ceECCCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence            488888888888888888888877776666543

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.25  E-value=0.0079  Score=30.68  Aligned_cols=30  Identities=13%  Similarity=0.174  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yrj_A           12 PYRCGECGKAFAQKANLTQHQRIHTGEKPS   41 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTTTSSCCSS
T ss_pred             CeECCCCCCccCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998753333333

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=95.24  E-value=0.006  Score=27.77  Aligned_cols=23  Identities=17%  Similarity=0.447  Sum_probs=20.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTT
T ss_pred             CccCCCCCcccCCHHHHHHHHHh
Confidence            37899999999999999999864

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.23  E-value=0.0067  Score=31.04  Aligned_cols=30  Identities=10%  Similarity=0.138  Sum_probs=24.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emy_A           12 PYECHECGKAFSRKYQLISHQRTHAGEKPS   41 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHTTSCCS
T ss_pred             CcCCCCCCcccCcHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998874444444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.22  E-value=0.0055  Score=31.31  Aligned_cols=30  Identities=10%  Similarity=0.159  Sum_probs=24.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   41 (46)
T 2eor_A           12 PYNCEECGKAFIHDSQLQEHQRIHTGEKPS   41 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHHHHSCCCS
T ss_pred             CccCCCCCCCcCCHHHHHHHHHhcCCCCCC
Confidence            489999999999999999998764444444

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=95.21  E-value=0.0086  Score=28.71  Aligned_cols=23  Identities=13%  Similarity=0.434  Sum_probs=21.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|.+|...|.....|..|...
T Consensus         7 ~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            7 PFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHHGG
T ss_pred             CeeCCCCCcccCCHHHHHHHHHH
Confidence            48999999999999999999875

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=95.20  E-value=0.0097  Score=30.50  Aligned_cols=30  Identities=10%  Similarity=0.145  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2el6_A           12 PYKCSQCEKSFSGKLRLLVHQRMHTREKPS   41 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCCSSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998764444444

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.18  E-value=0.0085  Score=30.84  Aligned_cols=30  Identities=17%  Similarity=0.255  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytm_A           12 PYKCMECGKAFGDNSSCTQHQRLHTGQRPS   41 (46)
T ss_dssp             SSSBTTTTBCCSSHHHHHHHHHHHHSCCCC
T ss_pred             CcCCCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998764444443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.18  E-value=0.0066  Score=31.08  Aligned_cols=31  Identities=13%  Similarity=0.124  Sum_probs=24.7

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytg_A           11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKPS   41 (46)
T ss_dssp             CSEECTTTCCEESSSHHHHTTGGGGSSCCSS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            3489999999999999999998754444444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=95.18  E-value=0.0079  Score=30.78  Aligned_cols=31  Identities=13%  Similarity=0.138  Sum_probs=25.0

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ema_A           11 KRYKCNECGKVFSRNSQLSQHQKIHTGEKPS   41 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTGGGCCCCC
T ss_pred             cCcCCCCCcchhCCHHHHHHHHHhcCCCCCC
Confidence            3489999999999999999998764444444

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.17  E-value=0.009  Score=30.43  Aligned_cols=30  Identities=10%  Similarity=0.085  Sum_probs=24.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epw_A           12 PCKCTECGKAFCWKSQLIMHQRTHVDDKHS   41 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHHHHCCSCCCS
T ss_pred             CeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999999863333333

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=95.17  E-value=0.0072  Score=31.02  Aligned_cols=30  Identities=10%  Similarity=0.171  Sum_probs=24.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emj_A           12 PFECAECGKSFSISSQLATHQRIHTGEKPS   41 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHTTSCSS
T ss_pred             CEECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998864444444

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=94.15  E-value=0.0035  Score=28.34  Aligned_cols=23  Identities=13%  Similarity=0.368  Sum_probs=20.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            37899999999999999999753

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=95.15  E-value=0.0059  Score=27.77  Aligned_cols=23  Identities=17%  Similarity=0.483  Sum_probs=20.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCCcChhhCCHHHHHHHHHH
Confidence            37899999999999999999764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=95.14  E-value=0.0087  Score=32.05  Aligned_cols=30  Identities=17%  Similarity=0.478  Sum_probs=25.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   31 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPY   31 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSE
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCc
Confidence            379999999999999999999875555555

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.14  E-value=0.01  Score=30.30  Aligned_cols=30  Identities=10%  Similarity=0.140  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2enc_A           12 PFKCEECGKGFYTNSQCYSHQRSHSGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSCCSSCC
T ss_pred             CcCCCCCCCcCCChHHHHHHHHHhCCCCCC
Confidence            489999999999999999998764443343

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.12  E-value=0.0078  Score=30.88  Aligned_cols=30  Identities=10%  Similarity=0.191  Sum_probs=24.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em2_A           12 PFKCKECGKAFRQNIHLASHLRIHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHCCCCSS
T ss_pred             CEECCcCCchhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998864444444

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.11  E-value=0.01  Score=30.15  Aligned_cols=30  Identities=17%  Similarity=0.387  Sum_probs=24.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|.+|...|.....|..|...-+...+|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (43)
T 2yrm_A           10 AFFCNECDCRFSEEASLKRHTLQTHSDKSG   39 (43)
T ss_dssp             CBCCSSSCCCBSSHHHHHHHHHHHTCTTCS
T ss_pred             CEECCCCCCeeCChHHHHHHHHhhCCCCCc
Confidence            489999999999999999998864444444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.10  E-value=0.0075  Score=30.95  Aligned_cols=30  Identities=10%  Similarity=0.202  Sum_probs=24.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em4_A           12 PYECIECGKAFKTKSSLICHRRSHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHSSSSCC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            489999999999999999998865444444

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=95.10  E-value=0.01  Score=30.26  Aligned_cols=30  Identities=10%  Similarity=0.093  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em9_A           12 PYNCKECGKSFRWASCLLKHQRVHSGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHGGGGTSCCCC
T ss_pred             CeECCccccccCChHHHHHHHHHhCCCCCC
Confidence            489999999999999999998764434444

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.09  E-value=0.011  Score=28.44  Aligned_cols=23  Identities=26%  Similarity=0.423  Sum_probs=20.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            9 THLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CeecCcCCCCcCchHHHHHHHHH
Confidence            48999999999999999999864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=95.09  E-value=0.0078  Score=27.09  Aligned_cols=23  Identities=22%  Similarity=0.481  Sum_probs=20.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .+.|++|...|.....|..|...
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHH
Confidence            37899999999999999999764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.06  E-value=0.013  Score=35.16  Aligned_cols=33  Identities=12%  Similarity=0.278  Sum_probs=28.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCCCch
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDLPED   73 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~e   73 (79)
                      .|.|++|...|.....|..|....|+...+|..
T Consensus        80 ~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           80 VLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             ceECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            489999999999999999999999887777643

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=95.06  E-value=0.0072  Score=27.75  Aligned_cols=23  Identities=22%  Similarity=0.551  Sum_probs=20.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTT
T ss_pred             CcCCCCCCcccCCHHHHHHHHHh
Confidence            48899999999999999999753

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.05  E-value=0.0074  Score=30.97  Aligned_cols=30  Identities=10%  Similarity=0.180  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yto_A           12 PYKCSDCGKAFTRKSGLHIHQQSHTGERHS   41 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHTCCCBT
T ss_pred             CEECcccCCccCCHhHHHHHHHHcCCCCCC
Confidence            489999999999999999998764433333

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.04  E-value=0.0085  Score=30.37  Aligned_cols=30  Identities=10%  Similarity=0.244  Sum_probs=24.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (44)
T 2emx_A           10 PFGCSCCEKAFSSKSYLLVHQQTHAEEKPS   39 (44)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHHTSSCSC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998864444444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=95.03  E-value=0.0062  Score=27.75  Aligned_cols=23  Identities=17%  Similarity=0.285  Sum_probs=20.8

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILL   24 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTG
T ss_pred             CccCCCCCchhCCHHHHHHHHHH
Confidence            37899999999999999999875

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.03  E-value=0.0088  Score=30.48  Aligned_cols=30  Identities=17%  Similarity=0.230  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emm_A           12 PHKCNECGKSFIQSAHLIQHQRIHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHSCCCTT
T ss_pred             CeeCCCCChhhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998764444443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=94.97  E-value=0.011  Score=28.60  Aligned_cols=23  Identities=13%  Similarity=0.304  Sum_probs=21.0

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus        11 ~~~C~~C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A           11 PFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CccCCCCCcccCcHHHHHHHHHH
Confidence            58999999999999999999764

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.91  E-value=0.006  Score=30.56  Aligned_cols=24  Identities=17%  Similarity=0.297  Sum_probs=21.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      .|.|++|...|.....|..|...-
T Consensus        11 ~~~C~~C~k~f~~~~~L~~H~~~H   34 (42)
T 2en2_A           11 PYKCETCGARFVQVAHLRAHVLIH   34 (42)
T ss_dssp             SEECTTTCCEESSHHHHHHHTHHH
T ss_pred             CEeCCCcChhhCCHHHHHHHHHHc
Confidence            489999999999999999998753

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=94.87  E-value=0.015  Score=34.23  Aligned_cols=29  Identities=14%  Similarity=0.204  Sum_probs=15.5

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      |.|++|...|.....|..|....+...++
T Consensus        74 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           74 FKCQECGKGFCQSRTLAVHKTLHMQTSSP  102 (106)
T ss_dssp             TSCSSSCCCCSSHHHHHHHHHHTTSCCCC
T ss_pred             eECCCcCCcccCHHHHHHHHHHhCCCCCC
Confidence            55555655555555555555544443333

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.86  E-value=0.0095  Score=30.45  Aligned_cols=30  Identities=10%  Similarity=0.212  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytk_A           12 PYKCNECGKVFTQNSHLTNHWRIHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHSSSSCS
T ss_pred             CEeCCcCCCccCCHHHHHHHHHHHCCCCCC
Confidence            489999999999999999998864444443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.81  E-value=0.011  Score=30.26  Aligned_cols=30  Identities=10%  Similarity=0.112  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-....+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytd_A           12 PYKCSECGKAFHRHTHLNEHRRIHTGYRPS   41 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHHTCCCSS
T ss_pred             CeECCCCCCeeCChHHHHHHHHHcCCCCCC
Confidence            489999999999999999998764444444

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.81  E-value=0.0067  Score=31.16  Aligned_cols=30  Identities=10%  Similarity=0.247  Sum_probs=24.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoo_A           12 PYGCNECGKNFGRHSHLIEHLKRHFREKSS   41 (46)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHSTTSS
T ss_pred             CEEccccCcccCCHHHHHHHHHHHcCCCCC
Confidence            489999999999999999998764343343

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=94.79  E-value=0.0081  Score=31.77  Aligned_cols=22  Identities=14%  Similarity=0.327  Sum_probs=13.3

Q ss_pred             ccchhhhhcCCChhhHhHHHHc
Q psy11933         42 HACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      |.|++|...|.....|..|...
T Consensus         5 ~~C~~C~~~f~~~~~l~~H~~~   26 (57)
T 3uk3_C            5 RECSYCGKFFRSNYYLNIHLRT   26 (57)
T ss_dssp             CBCTTTCCBCSCHHHHHHHHHH
T ss_pred             ccCCCCcchhCChHHHHHHHHH
Confidence            5566666666666666666554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=93.80  E-value=0.0051  Score=28.28  Aligned_cols=23  Identities=17%  Similarity=0.470  Sum_probs=20.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQ   24 (29)
Confidence            37899999999999999999763

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=94.74  E-value=0.012  Score=31.42  Aligned_cols=27  Identities=22%  Similarity=0.535  Sum_probs=23.1

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      ..|.|++|...|.....|..|...-+.
T Consensus        23 k~~~C~~C~k~f~~~~~L~~H~~~H~~   49 (54)
T 1yui_A           23 QPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHTT
T ss_pred             CCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            458999999999999999999876443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=93.75  E-value=0.0053  Score=28.12  Aligned_cols=23  Identities=26%  Similarity=0.641  Sum_probs=20.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRI   25 (30)
Confidence            37899999999999999999764

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.74  E-value=0.0086  Score=30.62  Aligned_cols=31  Identities=16%  Similarity=0.248  Sum_probs=24.4

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emh_A           11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKPS   41 (46)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHHHCSSCS
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3489999999999999999998754333343

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=94.68  E-value=0.015  Score=32.73  Aligned_cols=24  Identities=13%  Similarity=0.196  Sum_probs=13.7

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      |.|++|...|.....|..|....+
T Consensus        47 ~~C~~C~~~f~~~~~L~~H~~~H~   70 (77)
T 2cot_A           47 YKCDECGKAFIQRSHLIGHHRVHT   70 (77)
T ss_dssp             EECSSSCCEESSHHHHHHHGGGSC
T ss_pred             eeCCCCCCccCCHHHHHHHHHHhC
Confidence            556666666666666666655433

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.65  E-value=0.011  Score=28.54  Aligned_cols=23  Identities=13%  Similarity=0.398  Sum_probs=21.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            9 IFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHH
T ss_pred             CEECCCCCceeCCHHHHHHHHHH
Confidence            48999999999999999999874

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=94.64  E-value=0.014  Score=32.73  Aligned_cols=22  Identities=32%  Similarity=0.573  Sum_probs=11.4

Q ss_pred             ccchhhhhcCCChhhHhHHHHc
Q psy11933         42 HACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      |.|++|...|.....|..|...
T Consensus        46 ~~C~~C~k~f~~~~~L~~H~~~   67 (74)
T 2lce_A           46 YRCNICGAQFNRPANLKTHTRI   67 (74)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             EECCCCCchhCCHHHHHHHHHh
Confidence            4555555555555555555443

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.61  E-value=0.009  Score=30.64  Aligned_cols=31  Identities=13%  Similarity=0.061  Sum_probs=24.5

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-....+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em8_A           11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLS   41 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHHCCCCC
T ss_pred             CCeECcccCchhCCHHHHHHHHHHHcCCCCC
Confidence            3489999999999999999998864333343

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=94.58  E-value=0.011  Score=36.03  Aligned_cols=32  Identities=22%  Similarity=0.411  Sum_probs=26.6

Q ss_pred             hhhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         39 ALVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        39 A~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ...++|++|...|.....|..|...-|...||
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~   57 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQVF   57 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSSE
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCcc
Confidence            44589999999999999999999876655554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.58  E-value=0.01  Score=28.55  Aligned_cols=23  Identities=13%  Similarity=0.235  Sum_probs=20.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            9 PYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHH
Confidence            48999999999999999999864

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.58  E-value=0.0093  Score=30.48  Aligned_cols=30  Identities=10%  Similarity=0.078  Sum_probs=24.0

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emp_A           12 PYMCNECGKAFSVYSSLTTHQVIHTGEKPS   41 (46)
T ss_dssp             SEECSSSCCEESCHHHHHHHHHHHHCCSCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998764333343

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=94.51  E-value=0.01  Score=32.31  Aligned_cols=26  Identities=19%  Similarity=0.368  Sum_probs=21.7

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      ..|.|++|...|.....|..|....|
T Consensus        39 ~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A           39 KVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHHc
Confidence            34889999999999889999988766

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.42  E-value=0.0081  Score=30.82  Aligned_cols=30  Identities=13%  Similarity=0.264  Sum_probs=23.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytt_A           12 PYQCSECGKSFSGSYRLTQHWITHTREKPS   41 (46)
T ss_dssp             TTCCSSSCCCCSSHHHHHHHHTHHHHCCCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            489999999999999999998763333333

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.38  E-value=0.016  Score=27.93  Aligned_cols=23  Identities=17%  Similarity=0.452  Sum_probs=21.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elq_A            9 PFKCSLCEYATRSKSNLKAHMNR   31 (36)
T ss_dssp             SEECSSSSCEESCHHHHHHHHHH
T ss_pred             CccCCCCCchhCCHHHHHHHHHH
Confidence            48999999999999999999865

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=94.34  E-value=0.015  Score=30.69  Aligned_cols=23  Identities=22%  Similarity=0.489  Sum_probs=20.9

Q ss_pred             ccchhhhhcCCChhhHhHHHHcC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      |.|++|...|.....|..|...-
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h   24 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTH   24 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhc
Confidence            78999999999999999998763

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.24  E-value=0.012  Score=28.43  Aligned_cols=25  Identities=16%  Similarity=0.445  Sum_probs=21.8

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      .|.|++|...|.....|..|... |.
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~-H~   33 (36)
T 2elv_A            9 LYDCHICERKFKNELDRDRHMLV-HG   33 (36)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTT-TS
T ss_pred             CeECCCCCCccCCHHHHHHHHHH-hc
Confidence            48999999999999999999864 53

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=94.23  E-value=0.014  Score=32.65  Aligned_cols=26  Identities=19%  Similarity=0.286  Sum_probs=17.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      .|.|++|...|.....|..|....+.
T Consensus        14 ~~~C~~C~k~f~~~~~L~~H~~~h~~   39 (72)
T 1x6e_A           14 PYGCVECGKAFSRSSILVQHQRVHTG   39 (72)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CccCCCCCCccCCHHHHHHHHHhcCC
Confidence            46677777777777777777665433

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.22  E-value=0.0089  Score=30.56  Aligned_cols=30  Identities=10%  Similarity=0.121  Sum_probs=23.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2yu8_A           12 PYKCNECGKVFTQNSHLARHRRVHTGGKPS   41 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHTHHHHSCCCS
T ss_pred             CeECCcCCchhCCHHHHHHHHHhcCCCCCC
Confidence            489999999999999999998754343343

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=94.22  E-value=0.027  Score=32.48  Aligned_cols=22  Identities=18%  Similarity=0.471  Sum_probs=10.7

Q ss_pred             ccchhhhhcCCChhhHhHHHHc
Q psy11933         42 HACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      |.|++|...|.....|..|...
T Consensus        37 ~~C~~C~~~f~~~~~l~~H~~~   58 (96)
T 2dmd_A           37 YKCKTCDYAAADSSSLNKHLRI   58 (96)
T ss_dssp             EECSSSCCEESSHHHHHHHHHH
T ss_pred             EeCCCCCCccCCHHHHHHHHHH
Confidence            4455555555444445555443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.19  E-value=0.019  Score=33.83  Aligned_cols=36  Identities=22%  Similarity=0.358  Sum_probs=28.3

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCCCchhhh
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDLPEDLKD   76 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~e~~~   76 (79)
                      .-|.|.+|...|.....|..|... |....++-.+.|
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~-Htg~~~~~~~~~   47 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQ-HGVTSLQLGYID   47 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHH-HTTTSCCCCSCC
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhh-hCCCcccccccc
Confidence            348999999999999999999886 666665544443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.16  E-value=0.0075  Score=30.86  Aligned_cols=30  Identities=10%  Similarity=0.215  Sum_probs=23.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|.....|..|...-+...+|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en3_A           12 PFQCKECGMNFSWSCSLFKHLRSHERTDPS   41 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHHHHHHHSCCS
T ss_pred             CeeCcccChhhCCHHHHHHHHHHhCCCCCC
Confidence            489999999999999999998753333333

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.12  E-value=0.013  Score=28.88  Aligned_cols=26  Identities=23%  Similarity=0.393  Sum_probs=22.0

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      .|.|++|...|.....|..|....|.
T Consensus         9 ~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            9 LYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHHcc
Confidence            48999999999999999999444565

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.12  E-value=0.011  Score=30.28  Aligned_cols=24  Identities=13%  Similarity=0.242  Sum_probs=21.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      .|.|++|...|.....|..|...-
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emz_A           12 PFKCNECGKGFGRRSHLAGHLRLH   35 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHHHh
Confidence            489999999999999999998753

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=94.12  E-value=0.012  Score=31.00  Aligned_cols=26  Identities=19%  Similarity=0.443  Sum_probs=23.2

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      ..|.|++|...|.....|..|....|
T Consensus        31 ~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C           31 KPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            34899999999999999999998765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=94.10  E-value=0.014  Score=31.80  Aligned_cols=26  Identities=19%  Similarity=0.461  Sum_probs=23.7

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      ..|.|++|...|.....|..|....|
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~~H   34 (66)
T 2drp_A            9 HTYRCKVCSRVYTHISNFCRHYVTSH   34 (66)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cceECCCCcchhCCHHHHHHHHHHHc
Confidence            34899999999999999999999877

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=94.08  E-value=0.02  Score=32.21  Aligned_cols=29  Identities=31%  Similarity=0.564  Sum_probs=25.4

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      ..|.|++|...|.....|..|....|...
T Consensus        14 k~~~C~~C~k~f~~~~~L~~H~~~~h~~~   42 (77)
T 2ct1_A           14 KPYECYICHARFTQSGTMKMHILQKHTEN   42 (77)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CCeECCCcCchhCCHHHHHHHHHHhcCCC
Confidence            34899999999999999999998778753

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=94.03  E-value=0.024  Score=32.68  Aligned_cols=29  Identities=10%  Similarity=0.321  Sum_probs=24.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      .|.|++|...|.....|..|....|....
T Consensus        64 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           64 PFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            48999999999999999999987665443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=94.02  E-value=0.018  Score=31.84  Aligned_cols=30  Identities=10%  Similarity=0.159  Sum_probs=24.5

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      ..|.|.+|...|.....|..|...-+...+
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   37 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHERIHCTDRP   37 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSCS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            348999999999999999999987444433

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.99  E-value=0.015  Score=28.23  Aligned_cols=23  Identities=13%  Similarity=0.281  Sum_probs=20.7

Q ss_pred             hccchhhhhcCCCh-hhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDP-KTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~-k~l~~H~es   63 (79)
                      .|.|++|...|... ..|..|...
T Consensus         9 ~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            9 AMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             CEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CeECCCCChhhccCHHHHHHHHHh
Confidence            48999999999998 999999864

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=93.99  E-value=0.021  Score=31.88  Aligned_cols=31  Identities=13%  Similarity=0.137  Sum_probs=25.5

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|.+|...|.....|..|....+...+|
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~   46 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPY   46 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSE
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHcCCCCCE
Confidence            4589999999999999999999875554443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=93.86  E-value=0.022  Score=34.03  Aligned_cols=26  Identities=23%  Similarity=0.441  Sum_probs=15.9

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      |.|++|...|.....|..|....|+.
T Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           95 YKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             ccCCCccchhCCHHHHHHHHHHHCCC
Confidence            56666666666666666666655553

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=93.65  E-value=0.032  Score=29.76  Aligned_cols=28  Identities=18%  Similarity=0.404  Sum_probs=24.0

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      ..|.|++|...|.....|..|....|..
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~   38 (54)
T 2eps_A           11 KPYICQSCGKGFSRPDHLNGHIKQVHTS   38 (54)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3489999999999999999999856653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=93.63  E-value=0.049  Score=32.31  Aligned_cols=28  Identities=18%  Similarity=0.316  Sum_probs=23.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      .|.|.+|...|.....|..|....|...
T Consensus        69 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~   96 (107)
T 1wjp_A           69 KLTCLECMRTFKSSFSIWRHQVEVHNQN   96 (107)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred             CccCccccchhCCHHHHHHHHHHHcCCC
Confidence            4889999999999999999998777554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=93.57  E-value=0.032  Score=31.37  Aligned_cols=31  Identities=10%  Similarity=0.199  Sum_probs=24.8

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...|.....|..|...-+...+|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   47 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPY   47 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSE
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHcCCCcCe
Confidence            3589999999999999999999864444333

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=93.45  E-value=0.023  Score=32.67  Aligned_cols=27  Identities=15%  Similarity=0.327  Sum_probs=18.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      .|.|++|...|.....|..|....|..
T Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   61 (95)
T 2yt9_A           35 PYSCPVCGLRFKRKDRMSYHVRSHDGS   61 (95)
T ss_dssp             SEECSSSCCEESCHHHHHHHHHHHCCC
T ss_pred             CCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence            367777777777777777777665543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=93.31  E-value=0.028  Score=36.10  Aligned_cols=32  Identities=13%  Similarity=0.289  Sum_probs=27.2

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDLP   71 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p   71 (79)
                      ..+.|++|...|.....|..|...-|...|..
T Consensus        77 k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~  108 (133)
T 2lt7_A           77 RRYQCLACGKSFINYQFMSSHIKSVHSQDPSG  108 (133)
T ss_dssp             CCEEESSSCCEESSHHHHHHHHHHHTCCCTTS
T ss_pred             ccccCCCCCCCcCCHHHHHHHhHHhcCCCCCC
Confidence            34899999999999999999999989876653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=93.29  E-value=0.0051  Score=29.58  Aligned_cols=24  Identities=17%  Similarity=0.420  Sum_probs=20.9

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      |.|++|...|.....|..|... |.
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~-H~   26 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKT-AF   26 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTS-SS
T ss_pred             CCCCCCCcccCCHHHHHHHHHH-Hc
Confidence            7899999999999999999764 53

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=93.28  E-value=0.056  Score=31.71  Aligned_cols=29  Identities=10%  Similarity=0.257  Sum_probs=19.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      .|.|.+|...|.....|..|....+...+
T Consensus        45 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   73 (106)
T 2ee8_A           45 PYTCDICHKAFRRQDHLRDHRYIHSKEKP   73 (106)
T ss_dssp             CCBCSSSCCBCSCHHHHHHHGGGSCCCCT
T ss_pred             CcCCCCccchhCCHHHHHHHHHHhCCCCC
Confidence            36777777777777777777665444333

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=93.25  E-value=0.042  Score=32.75  Aligned_cols=24  Identities=13%  Similarity=0.187  Sum_probs=16.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      .|.|++|...|.....|..|....
T Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~   58 (124)
T 2dlq_A           35 PFECPKCGKCYFRKENLLEHEARN   58 (124)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHC
T ss_pred             CeECCCCCchhcCHHHHHHHHhhh
Confidence            466777777777777777777654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=93.24  E-value=0.035  Score=29.07  Aligned_cols=21  Identities=24%  Similarity=0.559  Sum_probs=19.7

Q ss_pred             hccchhhhhcCCChhhHhHHH
Q psy11933         41 VHACVVCKAQMPDPKTYKQHF   61 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~   61 (79)
                      -|+|++|...|.....|..|.
T Consensus         8 p~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCEETTTTEECSCHHHHHHHH
T ss_pred             CeECCCCCCccCCHhHccCcC
Confidence            489999999999999999997

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=93.13  E-value=0.032  Score=31.83  Aligned_cols=28  Identities=18%  Similarity=0.405  Sum_probs=22.0

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      ..|.|++|...|.....|..|... |...
T Consensus        31 kp~~C~~C~k~F~~~~~L~~H~~~-Htge   58 (60)
T 4gzn_C           31 RPRSCPECGKCFRDQSEVNRHLKV-HQNK   58 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGG-GSCC
T ss_pred             cCeECCCCCCCcCCHHHHHHHhCc-cCCC
Confidence            458899999999999999999763 6543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.95  E-value=0.025  Score=31.23  Aligned_cols=29  Identities=14%  Similarity=0.202  Sum_probs=21.8

Q ss_pred             hccch-hhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         41 VHACV-VCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        41 ~~~C~-vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      .|.|+ +|...|.....|..|...--|+.+
T Consensus        36 p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           36 PVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             EEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            47888 888888888888888875446544

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=92.84  E-value=0.037  Score=31.12  Aligned_cols=28  Identities=21%  Similarity=0.408  Sum_probs=25.0

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      ..|.|++|...|.....|..|....|..
T Consensus        14 k~~~C~~C~~~f~~~~~l~~H~~~~~~~   41 (86)
T 1x6h_A           14 KPYACSHCDKTFRQKQLLDMHFKRYHDP   41 (86)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence            3489999999999999999999988865

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=92.68  E-value=0.022  Score=31.76  Aligned_cols=32  Identities=13%  Similarity=0.165  Sum_probs=24.3

Q ss_pred             hhhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         39 ALVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        39 A~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ...+.|++|...|.....|..|....+...+|
T Consensus        27 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   58 (82)
T 2kmk_A           27 TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH   58 (82)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHTCCCE
T ss_pred             CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCC
Confidence            34588999999999988899998766554443

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=92.66  E-value=0.048  Score=25.30  Aligned_cols=23  Identities=13%  Similarity=0.408  Sum_probs=20.4

Q ss_pred             hccch--hhhhcCCChhhHhHHHHc
Q psy11933         41 VHACV--VCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~--vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|+  +|...|.....|..|...
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~   26 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRT   26 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHH
Confidence            37898  999999999999999864

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=92.62  E-value=0.034  Score=27.04  Aligned_cols=30  Identities=10%  Similarity=0.231  Sum_probs=23.4

Q ss_pred             hccch--hhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACV--VCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~--vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|.  .|...|.....|..|...-....+|
T Consensus         6 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            6 PFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             ceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            48999  5999999999999998754444443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.45  E-value=0.022  Score=31.07  Aligned_cols=31  Identities=13%  Similarity=0.194  Sum_probs=24.7

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..+.|++|...|.....|..|...-+...+|
T Consensus        38 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~   68 (73)
T 2ctu_A           38 KTPMCEKCRKDSCQEAALNKDEGNESGKKTS   68 (73)
T ss_dssp             SSCCCHHHHHTCSCCCSSCCCSSCCCCCCCS
T ss_pred             CCCCCCCCChhhcCHHHHHHHHHhhcCCCCC
Confidence            3589999999999999999998764444444

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=92.24  E-value=0.029  Score=32.34  Aligned_cols=26  Identities=23%  Similarity=0.468  Sum_probs=20.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      .|.|++|...|.....|..|....|+
T Consensus        31 ~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C           31 PFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhCC
Confidence            47888888888888888888877763

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=92.18  E-value=0.051  Score=32.18  Aligned_cols=29  Identities=14%  Similarity=0.201  Sum_probs=19.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      .|.|++|...|.....|..|....+...+
T Consensus        37 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   65 (110)
T 2csh_A           37 PYGCGVCGKKFKMKHHLVGHMKIHTGIKP   65 (110)
T ss_dssp             SEECTTTSCEESSSHHHHHHHTTTCCCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            37788888888777777777765444433

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.11  E-value=0.073  Score=30.60  Aligned_cols=26  Identities=12%  Similarity=0.173  Sum_probs=15.7

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      +.|++|...|.....|..|....|..
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~   51 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVG   51 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CcccccccccCCHHHHHHHHHHhccC
Confidence            45666666666666666666554543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=92.06  E-value=0.05  Score=24.38  Aligned_cols=23  Identities=22%  Similarity=0.426  Sum_probs=20.4

Q ss_pred             hccch--hhhhcCCChhhHhHHHHc
Q psy11933         41 VHACV--VCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~--vC~~~f~~~k~l~~H~es   63 (79)
                      .+.|+  +|...|.....|..|...
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~   26 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKI   26 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHH
Confidence            37899  999999999999999764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=91.97  E-value=0.083  Score=24.50  Aligned_cols=23  Identities=13%  Similarity=0.251  Sum_probs=20.7

Q ss_pred             hccch--hhhhcCCChhhHhHHHHc
Q psy11933         41 VHACV--VCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~--vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|+  +|...|.....|..|...
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~   27 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHH
Confidence            37899  899999999999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=91.89  E-value=0.037  Score=31.39  Aligned_cols=25  Identities=12%  Similarity=0.421  Sum_probs=15.3

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      +.|++|...|.....|..|....+.
T Consensus        35 ~~C~~C~~~f~~~~~l~~H~~~h~~   59 (90)
T 1a1h_A           35 FQCRICMRNFSRSDHLTTHIRTHTG   59 (90)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             ccCCCCCcccCCHHHHHHHHHHcCC
Confidence            5666666666666666666654433

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=91.71  E-value=0.088  Score=32.09  Aligned_cols=21  Identities=24%  Similarity=0.572  Sum_probs=10.3

Q ss_pred             ccchhhhhcCCChhhHhHHHH
Q psy11933         42 HACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      |.|++|...|.....|..|..
T Consensus        75 ~~C~~C~k~f~~~~~l~~H~~   95 (129)
T 2wbt_A           75 FVCPLCLMPFSSSVSLKQHIR   95 (129)
T ss_dssp             EECTTTCCEESSHHHHHHHHH
T ss_pred             eECCCCCcccCCHhHHHHHHH
Confidence            445555555555444444443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=91.60  E-value=0.035  Score=30.88  Aligned_cols=24  Identities=21%  Similarity=0.433  Sum_probs=18.6

Q ss_pred             hhccchhhhhcCCChhhHhHHHHc
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      ..+.|++|...|.....|..|...
T Consensus        56 ~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A           56 KPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CCCcCCCcchhhCChHHHHHHHHh
Confidence            347888888888888888888764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=91.56  E-value=0.085  Score=32.95  Aligned_cols=32  Identities=13%  Similarity=0.162  Sum_probs=25.3

Q ss_pred             hhhhccchhhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         38 KALVHACVVCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        38 aA~~~~C~vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      +...+.|.+|...|.....|..|....|...+
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   53 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGP   53 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCT
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCc
Confidence            34568888999999999999999888786543

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=91.50  E-value=0.095  Score=26.54  Aligned_cols=30  Identities=13%  Similarity=0.227  Sum_probs=23.8

Q ss_pred             hccch--hhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACV--VCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~--vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|.  +|...|.....|..|...-....+|
T Consensus        12 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   43 (48)
T 2ent_A           12 PFACTWPGCGWRFSRSDELSRHRRSHSGVKPS   43 (48)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHTTSCCCCSC
T ss_pred             CeECCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            48998  8999999999999998763333343

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.48  E-value=0.074  Score=30.57  Aligned_cols=29  Identities=7%  Similarity=0.036  Sum_probs=23.6

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      +.|++|...|.....|..|...-+...+|
T Consensus        63 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   91 (95)
T 2ej4_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKSG   91 (95)
T ss_dssp             TTCSSTTCCCSSHHHHHHHHHHHHTCCCC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            79999999999999999998864343444

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=91.45  E-value=0.062  Score=30.59  Aligned_cols=26  Identities=19%  Similarity=0.324  Sum_probs=22.4

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      -|.|.+|...|.....|..|... |..
T Consensus         4 py~C~~C~k~F~~~~~L~~H~~~-Ht~   29 (60)
T 4gzn_C            4 PFFCNFCGKTYRDASGLSRHRRA-HLG   29 (60)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHH-HHT
T ss_pred             CccCCCCCCEeCCHHHHHHHHHH-hCC
Confidence            38999999999999999999875 643

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=91.41  E-value=0.075  Score=31.89  Aligned_cols=29  Identities=21%  Similarity=0.406  Sum_probs=20.0

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      .+.|++|...|.....|..|....+...+
T Consensus        34 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   62 (124)
T 1ubd_C           34 VHVCAECGKAFVESSKLKRHQLVHTGEKP   62 (124)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCCCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            36788888888887778888765444433

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=91.36  E-value=0.042  Score=30.57  Aligned_cols=25  Identities=12%  Similarity=0.214  Sum_probs=22.0

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      ..|.|++|...|.....|..|....
T Consensus        41 ~~~~C~~C~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A           41 KPYKCLECGKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHHHhc
Confidence            3489999999999999999998753

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=91.01  E-value=0.071  Score=29.39  Aligned_cols=24  Identities=13%  Similarity=0.402  Sum_probs=20.3

Q ss_pred             hhccchhhhhcCCChhhHhHHHHc
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      ..|.|++|...|.....|..|...
T Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G           48 KPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHTT
T ss_pred             CCeECCCCCchhCCHHHHHHHHHh
Confidence            348899999999999999999753

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=90.79  E-value=0.082  Score=29.82  Aligned_cols=22  Identities=23%  Similarity=0.555  Sum_probs=11.6

Q ss_pred             ccchh--hhhcCCChhhHhHHHHc
Q psy11933         42 HACVV--CKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~v--C~~~f~~~k~l~~H~es   63 (79)
                      +.|++  |...|.....|..|...
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~   29 (89)
T 2wbs_A            6 HTCDYAGCGKTYTKSSHLKAHLRT   29 (89)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHTT
T ss_pred             eeCCCCCCCCcCCCHHHHHHHHHh
Confidence            45555  55555555555555543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=90.69  E-value=0.076  Score=34.36  Aligned_cols=22  Identities=14%  Similarity=0.342  Sum_probs=11.4

Q ss_pred             ccchhhhhcCCChhhHhHHHHc
Q psy11933         42 HACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      |.|++|...|.....|..|...
T Consensus       134 ~~C~~C~~~f~~~~~L~~H~~~  155 (190)
T 2i13_A          134 YKCPECGKSFSREDNLHTHQRT  155 (190)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             eECCCCCcccCCHHHHHHHHHh
Confidence            4555555555555555555443

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=90.69  E-value=0.071  Score=30.60  Aligned_cols=22  Identities=14%  Similarity=0.498  Sum_probs=16.4

Q ss_pred             ccchhhhhcCCChhhHhHHHHc
Q psy11933         42 HACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      |.|++|...|.....|..|...
T Consensus         4 ~~C~~C~k~f~~~~~L~~H~~~   25 (88)
T 1llm_C            4 FQCRICMRNFSRSDHLTTHIRT   25 (88)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCCCCCccCCHHHHHHHHHH
Confidence            6788888888887777777653

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.59  E-value=0.073  Score=29.80  Aligned_cols=25  Identities=12%  Similarity=0.235  Sum_probs=22.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      .|.|.+|...|.....|..|...-+
T Consensus         7 ~~~C~~C~k~f~~~~~L~~H~~~h~   31 (78)
T 2d9h_A            7 GLQCEICGFTCRQKASLNWHQRKHA   31 (78)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CeECCCCCCeeCCHHHHHHHHHHhh
Confidence            4899999999999999999987644

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=90.54  E-value=0.089  Score=29.73  Aligned_cols=26  Identities=19%  Similarity=0.355  Sum_probs=22.5

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      ..|.|++|...|.....|..|...-+
T Consensus        61 ~~~~C~~C~~~f~~~~~l~~H~~~H~   86 (90)
T 1a1h_A           61 KPFACDICGRKFARSDERKRHTKIHL   86 (90)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            35899999999999999999987543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=90.46  E-value=0.063  Score=34.92  Aligned_cols=27  Identities=26%  Similarity=0.592  Sum_probs=23.9

Q ss_pred             hhhccchhhhhcCCChhhHhHHHHcC-C
Q psy11933         39 ALVHACVVCKAQMPDPKTYKQHFENK-H   65 (79)
Q Consensus        39 A~~~~C~vC~~~f~~~k~l~~H~esK-H   65 (79)
                      -..+-|.+|...|.++..|.+|+..| |
T Consensus        91 ~~~~~C~~C~~~f~s~~~~~~H~~gk~H  118 (127)
T 1zu1_A           91 DRSKCCPVCNMTFSSPVVAESHYIGKTH  118 (127)
T ss_dssp             CTTTEETTTTEECSSHHHHHHHHTSHHH
T ss_pred             CCCeEcCCCCCEeCCHHHHHHHHCCHHH
Confidence            34578999999999999999999987 5

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.20  E-value=0.052  Score=29.84  Aligned_cols=28  Identities=18%  Similarity=0.398  Sum_probs=23.7

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.|++|...|. ...|..|... ....+|
T Consensus        10 ~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~   37 (66)
T 2eod_A           10 TQPCTYCTKEFV-FDTIQSHQYQ-CPRLPV   37 (66)
T ss_dssp             EEECSSSCCEEE-HHHHHHHHHH-CSSSEE
T ss_pred             CeeccccCCccC-HHHHHHHHHH-cCCcCc
Confidence            489999999999 9999999987 655544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=90.17  E-value=0.066  Score=31.72  Aligned_cols=27  Identities=15%  Similarity=0.392  Sum_probs=18.0

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      .+.|++|...|.....|..|....+..
T Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (119)
T 2jp9_A           66 PFQCKTCQRKFSRSDHLKTHTRTHTGE   92 (119)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCccCchhCCHHHHHHHHHHhcCC
Confidence            367777777777777777776654433

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=89.91  E-value=0.087  Score=29.24  Aligned_cols=30  Identities=20%  Similarity=0.357  Sum_probs=22.0

Q ss_pred             hccchh--hhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVV--CKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~v--C~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .+.|++  |...|.....|..|....+...+|
T Consensus        38 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~   69 (79)
T 2dlk_A           38 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY   69 (79)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred             CeECCCCCCcCccCCHHHHHHHHHHhCCCCCe
Confidence            478888  888888888888888754444443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=89.82  E-value=0.097  Score=25.49  Aligned_cols=23  Identities=17%  Similarity=0.446  Sum_probs=20.3

Q ss_pred             hccchh--hhhcCCChhhHhHHHHc
Q psy11933         41 VHACVV--CKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~v--C~~~f~~~k~l~~H~es   63 (79)
                      .|.|.+  |...|.....|..|...
T Consensus         8 ~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            8 QHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHh
Confidence            489995  99999999999999764

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=89.64  E-value=0.11  Score=33.68  Aligned_cols=24  Identities=25%  Similarity=0.605  Sum_probs=22.0

Q ss_pred             ccchhhhhcCCChhhHhHHHHcC-C
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENK-H   65 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esK-H   65 (79)
                      +.|.+|..+|.+..++..|+.++ |
T Consensus        33 ~~C~~C~v~~~S~s~~~~H~~gkkH   57 (127)
T 1zu1_A           33 TQCKVCSAVLISESQKLAHYQSRKH   57 (127)
T ss_dssp             SEETTTTEECCSHHHHHHHHHCHHH
T ss_pred             CcCcCCCCEeCCHHHHHHHHCcHHH
Confidence            77999999999999999999865 5

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=89.18  E-value=0.097  Score=34.96  Aligned_cols=25  Identities=32%  Similarity=0.672  Sum_probs=23.4

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      ..|.|.+|...|.+...|..|+.+|
T Consensus        49 kpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           49 GLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cceEcccCcchhCCHHHHHHHHhhh
Confidence            4599999999999999999999988

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=88.95  E-value=0.12  Score=30.45  Aligned_cols=29  Identities=10%  Similarity=0.256  Sum_probs=24.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .|.| +|...|.....|..|....+...+|
T Consensus        10 ~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~   38 (110)
T 2csh_A           10 LYPC-QCGKSFTHKSQRDRHMSMHLGLRPY   38 (110)
T ss_dssp             CEEC-TTSCEESSHHHHHHHHHHHSCCCSE
T ss_pred             CEec-cCCCccCCHHHHHHHHHHcCCCcCc
Confidence            4899 9999999999999999876655444

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=88.76  E-value=0.17  Score=29.02  Aligned_cols=24  Identities=17%  Similarity=0.400  Sum_probs=20.3

Q ss_pred             hhccchhhhhcCCChhhHhHHHHc
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      ..|.|++|...|.....|..|...
T Consensus        74 ~~~~C~~C~~~f~~~~~l~~H~~~   97 (100)
T 2ebt_A           74 KPFQCGVCNRSFSRSDHLALHMKR   97 (100)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             CCeECCCCcCccCCHHHHHHHHHH
Confidence            348899999999999999999764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.59  E-value=0.11  Score=30.83  Aligned_cols=26  Identities=19%  Similarity=0.247  Sum_probs=22.3

Q ss_pred             hhccchhhhhcCC-ChhhHhHHHHcCC
Q psy11933         40 LVHACVVCKAQMP-DPKTYKQHFENKH   65 (79)
Q Consensus        40 ~~~~C~vC~~~f~-~~k~l~~H~esKH   65 (79)
                      ..|.|.+|...|. ....|..|....|
T Consensus        23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~   49 (98)
T 2gqj_A           23 GEAVCPTCNVVTRKTLVGLKKHMEVCQ   49 (98)
T ss_dssp             SCCCCTTTCCCCSSCSHHHHHHHHHHH
T ss_pred             CCcCCCCCCCChhhhHHHHHHHHHHHc
Confidence            4589999999999 9999999987544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=88.28  E-value=0.12  Score=28.41  Aligned_cols=31  Identities=16%  Similarity=0.291  Sum_probs=23.4

Q ss_pred             hhccchh--hhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVV--CKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~v--C~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      ..++|.+  |...|.....|..|....+...+|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~   48 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPF   48 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSE
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCc
Confidence            3488988  999999999999998765444443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.27  E-value=0.15  Score=26.59  Aligned_cols=23  Identities=22%  Similarity=0.531  Sum_probs=20.4

Q ss_pred             hccchh--hhhcCCChhhHhHHHHc
Q psy11933         41 VHACVV--CKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~v--C~~~f~~~k~l~~H~es   63 (79)
                      -|.|++  |...|.....|..|...
T Consensus         9 p~~C~~~~C~k~F~~~~~L~~H~r~   33 (38)
T 2eln_A            9 LLKCPTDGCDYSTPDKYKLQAHLKV   33 (38)
T ss_dssp             CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHh
Confidence            489987  99999999999999763

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=88.15  E-value=0.23  Score=30.13  Aligned_cols=27  Identities=26%  Similarity=0.507  Sum_probs=24.2

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      ..|.|++|...|.....|..|....|.
T Consensus        99 ~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           99 HTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            458999999999999999999988775

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=88.02  E-value=0.22  Score=30.02  Aligned_cols=30  Identities=23%  Similarity=0.334  Sum_probs=23.9

Q ss_pred             hhccchhhhhcC-CChhhHhHHHHcCCCCCCC
Q psy11933         40 LVHACVVCKAQM-PDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        40 ~~~~C~vC~~~f-~~~k~l~~H~esKHpK~~~   70 (79)
                      ..|.|++|...| .....|..|... |...+|
T Consensus        33 ~~~~C~~C~k~F~~~~~~L~~H~~~-h~~k~~   63 (96)
T 2ctd_A           33 GSVSCPTCQAVGRKTIEGLKKHMEN-CKQEMF   63 (96)
T ss_dssp             SCEECTTTCSCEESSHHHHHHHHHH-HCCCCC
T ss_pred             CCcCCCCCCCCcccCHHHHHHHHHH-HCCCCe
Confidence            358999999999 999999999876 443343

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.80  E-value=0.22  Score=29.54  Aligned_cols=23  Identities=17%  Similarity=0.310  Sum_probs=20.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus        19 ~~~C~~C~k~f~~~~~L~~H~~~   41 (115)
T 2dmi_A           19 KFRCKDCSAAYDTLVELTVHMNE   41 (115)
T ss_dssp             SEEBSSSSCEESSHHHHHHHHHH
T ss_pred             CEECCccCchhcCHHHHHHHHHH
Confidence            48899999999999999999886

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=87.60  E-value=0.16  Score=28.54  Aligned_cols=22  Identities=14%  Similarity=0.403  Sum_probs=17.6

Q ss_pred             hccchhhhhcCCChhhHhHHHH
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      .|.|++|...|.....|..|..
T Consensus        65 ~~~C~~C~~~f~~~~~l~~H~~   86 (89)
T 2wbs_A           65 PFQCQKCDRAFSRSDHLALHMK   86 (89)
T ss_dssp             CEECSSSSCEESSHHHHHHHGG
T ss_pred             CccCCCCCcccCCHHHHHHHHH
Confidence            4788888888888888888865

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=87.29  E-value=0.12  Score=28.61  Aligned_cols=25  Identities=24%  Similarity=0.437  Sum_probs=19.5

Q ss_pred             hhccchh--hhhcCCChhhHhHHHHcC
Q psy11933         40 LVHACVV--CKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        40 ~~~~C~v--C~~~f~~~k~l~~H~esK   64 (79)
                      ..+.|++  |...|.....|..|....
T Consensus        30 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   56 (85)
T 2j7j_A           30 LPYECPHEGCDKRFSLPSRLKRHEKVH   56 (85)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCeeCCCCCCcCccCCHHHHHHHHHHh
Confidence            4478887  888888888888887653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=86.97  E-value=0.13  Score=33.00  Aligned_cols=21  Identities=29%  Similarity=0.659  Sum_probs=10.4

Q ss_pred             ccchhhhhcCCChhhHhHHHH
Q psy11933         42 HACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      |+|++|...|.....|..|..
T Consensus        23 y~C~~C~k~F~~~~~L~~H~~   43 (133)
T 2lt7_A           23 YICIVCKRSYVCLTSLRRHFN   43 (133)
T ss_dssp             EEETTTCCEESCHHHHHHHHH
T ss_pred             eECCCCCCCcCCHHHHHHHHH
Confidence            445555555555555555543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=86.89  E-value=0.3  Score=28.79  Aligned_cols=23  Identities=22%  Similarity=0.358  Sum_probs=17.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus        16 ~~~C~~C~~~f~~~~~l~~H~~~   38 (107)
T 1wjp_A           16 VYQCRLCNAKLSSLLEQGSHERL   38 (107)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHHH
Confidence            47788888888887777777764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=86.42  E-value=0.23  Score=32.05  Aligned_cols=27  Identities=15%  Similarity=0.300  Sum_probs=9.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      .|.|++|...|.....|..|....+..
T Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   47 (190)
T 2i13_A           21 PYACPECGKSFSRSDHLAEHQRTHTGE   47 (190)
T ss_dssp             ----------CCSSHHHHHGGGCC---
T ss_pred             CCcCCCCccccCCHHHHHHHHHHcCCC
Confidence            467777777777777777776654433

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=85.89  E-value=0.16  Score=27.92  Aligned_cols=29  Identities=14%  Similarity=0.335  Sum_probs=23.1

Q ss_pred             hccch--hhhhcCCChhhHhHHHHcCCCCCC
Q psy11933         41 VHACV--VCKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        41 ~~~C~--vC~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      .|.|+  +|...|.....|..|...-+...+
T Consensus        19 ~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~   49 (73)
T 1f2i_G           19 PYACPVESCDRRFSRSDELTRHIRIHTGQKP   49 (73)
T ss_dssp             CEECSSTTBCCEESSHHHHHHHHHHHHCCCC
T ss_pred             ccCCcCCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            48998  599999999999999876444433

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=85.79  E-value=0.26  Score=27.23  Aligned_cols=24  Identities=21%  Similarity=0.294  Sum_probs=22.0

Q ss_pred             ccchh---hhhcCCChhhHhHHHHcCC
Q psy11933         42 HACVV---CKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        42 ~~C~v---C~~~f~~~k~l~~H~esKH   65 (79)
                      +.|++   |...|.....|..|....|
T Consensus        59 ~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           59 YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            89999   9999999999999988655

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=85.75  E-value=0.27  Score=30.57  Aligned_cols=24  Identities=17%  Similarity=0.376  Sum_probs=14.3

Q ss_pred             ccchh--hhhcCCChhhHhHHHHcCC
Q psy11933         42 HACVV--CKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        42 ~~C~v--C~~~f~~~k~l~~H~esKH   65 (79)
                      |.|++  |...|.....|..|....+
T Consensus        91 ~~C~~~~C~~~f~~~~~L~~H~~~h~  116 (155)
T 2rpc_A           91 FPCPFPGCGKIFARSENLKIHKRTHT  116 (155)
T ss_dssp             EECSCTTTCCEESCHHHHHHHHTTTC
T ss_pred             ccCCcCCCCCccCCHHHHHHHHHhhC
Confidence            56665  6666666666666655433

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=85.58  E-value=0.21  Score=28.61  Aligned_cols=22  Identities=14%  Similarity=0.483  Sum_probs=11.1

Q ss_pred             ccch--hhhhcCCChhhHhHHHHc
Q psy11933         42 HACV--VCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~--vC~~~f~~~k~l~~H~es   63 (79)
                      |.|+  +|...|.....|..|...
T Consensus        46 ~~C~~~~C~~~f~~~~~l~~H~~~   69 (100)
T 2ebt_A           46 YKCTWEGCDWRFARSDELTRHYRK   69 (100)
T ss_dssp             EECCSSSCCCEESSHHHHHHHHHH
T ss_pred             eeCCCCCCCCccCCHHHHHHHHHH
Confidence            4453  355555555555555543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=84.85  E-value=0.41  Score=29.75  Aligned_cols=27  Identities=22%  Similarity=0.346  Sum_probs=19.9

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      .|.|.+|...|.....|..|....|..
T Consensus        50 pf~C~~Cgk~F~~~~~L~~H~~r~Htg   76 (102)
T 2ghf_A           50 SYVCVECNFLTKRYDALSEHNLKYHPG   76 (102)
T ss_dssp             CEEETTTTEEESSTHHHHTHHHHTSTT
T ss_pred             CcCCCCCCcccCCHHHHHHHHHHhcCC
Confidence            378888888888888888884334543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=84.81  E-value=0.31  Score=30.07  Aligned_cols=24  Identities=25%  Similarity=0.726  Sum_probs=15.6

Q ss_pred             ccchh--hhhcCCChhhHhHHHHcCC
Q psy11933         42 HACVV--CKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        42 ~~C~v--C~~~f~~~k~l~~H~esKH   65 (79)
                      |.|++  |...|.....|..|....|
T Consensus       129 ~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          129 YVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             eeCCCCCCccccCCHHHHHHHHHhhc
Confidence            66666  6666666666666666544

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=83.61  E-value=0.3  Score=30.40  Aligned_cols=25  Identities=28%  Similarity=0.591  Sum_probs=23.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKH   65 (79)
                      .|.|++|...|.....|..|....|
T Consensus        18 py~C~~Cgk~F~~~~~L~~H~r~~H   42 (102)
T 2ghf_A           18 GYECKYCTFQTPDLNMFTFHVDSEH   42 (102)
T ss_dssp             SEECSSCSCEESCHHHHHHHHHHHC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHhhC
Confidence            4899999999999999999998778

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=82.79  E-value=0.36  Score=28.96  Aligned_cols=23  Identities=13%  Similarity=0.423  Sum_probs=20.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|...|.....|..|...
T Consensus        25 py~C~~C~k~F~~~~~L~~H~~~   47 (88)
T 1x6f_A           25 TYQCKHCDSKLQSTAELTSHLNI   47 (88)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcCCCCCCEeCCHHHHHHHHHH
Confidence            48999999999999999999764

>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6

Probab=82.57  E-value=0.46  Score=28.90  Aligned_cols=27  Identities=30%  Similarity=0.603  Sum_probs=22.8

Q ss_pred             hccchhhhhcCCC---hhhHhHHHHcCCCC
Q psy11933         41 VHACVVCKAQMPD---PKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~---~k~l~~H~esKHpK   67 (79)
                      ..+|.+|...+--   =..|..|.+.+||.
T Consensus        29 ~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~   58 (73)
T 2ct5_A           29 KIYCRICMAQIAYSGNTSNLSYHLEKNHPE   58 (73)
T ss_dssp             CCEETTTTEECCCCSSTHHHHHHHHHSCHH
T ss_pred             EEECCCCCccccCCCChHhHHHHHHHHCHH
Confidence            4689999998753   67899999999984

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=82.55  E-value=0.36  Score=28.77  Aligned_cols=28  Identities=11%  Similarity=0.269  Sum_probs=16.4

Q ss_pred             ccchh--hhhcCCChhhHhHHHHcCCCCCC
Q psy11933         42 HACVV--CKAQMPDPKTYKQHFENKHPKND   69 (79)
Q Consensus        42 ~~C~v--C~~~f~~~k~l~~H~esKHpK~~   69 (79)
                      +.|++  |...|.....|..|....+...+
T Consensus        63 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   92 (124)
T 1ubd_C           63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRP   92 (124)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHHHCCCC
T ss_pred             eeCCCCCCcCccCCHHHHHHHHHHhCCCCc
Confidence            56654  66666666666666654444333

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=82.47  E-value=0.34  Score=28.52  Aligned_cols=29  Identities=14%  Similarity=0.257  Sum_probs=19.8

Q ss_pred             hhccch--hhhhcCCChhhHhHHHHcCCCCC
Q psy11933         40 LVHACV--VCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        40 ~~~~C~--vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      ..+.|+  +|...|.....|..|....+...
T Consensus        35 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   65 (119)
T 2jp9_A           35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVK   65 (119)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHHCCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHcCCCC
Confidence            347777  68888887777777777644433

>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}

Probab=82.45  E-value=0.16  Score=26.25  Aligned_cols=14  Identities=36%  Similarity=0.828  Sum_probs=11.3

Q ss_pred             hhccchhhhhcCCC
Q psy11933         40 LVHACVVCKAQMPD   53 (79)
Q Consensus        40 ~~~~C~vC~~~f~~   53 (79)
                      +.++|+||-+.||-
T Consensus         5 f~vqcpvcqq~mpa   18 (29)
T 3vhs_A            5 FQVQCPVCQQMMPA   18 (29)
T ss_dssp             CEEECTTTCCEEEG
T ss_pred             eeeeChHHHHhCcH
Confidence            45789999888876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=82.13  E-value=0.6  Score=28.77  Aligned_cols=22  Identities=23%  Similarity=0.652  Sum_probs=12.7

Q ss_pred             ccchh--hhhcCCChhhHhHHHHc
Q psy11933         42 HACVV--CKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~v--C~~~f~~~k~l~~H~es   63 (79)
                      |.|++  |...|.....|..|...
T Consensus        68 ~~C~~~~C~~~f~~~~~l~~H~~~   91 (155)
T 2gli_A           68 HKCTFEGCRKSYSRLENLKTHLRS   91 (155)
T ss_dssp             CCCCSTTCCCCCSSHHHHHHHHHH
T ss_pred             ccCCCCCCCCcccCHHHHHHHHHH
Confidence            55654  66666665556666554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=81.40  E-value=0.52  Score=25.92  Aligned_cols=27  Identities=15%  Similarity=0.313  Sum_probs=22.6

Q ss_pred             hccchh--hhhcCCChhhHhHHHHcCCCC
Q psy11933         41 VHACVV--CKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~v--C~~~f~~~k~l~~H~esKHpK   67 (79)
                      .+.|.+  |...|.....|..|....|..
T Consensus         7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~   35 (79)
T 2dlk_A            7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIH   35 (79)
T ss_dssp             SEECSSTTTCCEESSHHHHHHHHHHGGGS
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHHhCC
Confidence            477876  999999999999999866643

>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_C 3k1q_B

Probab=80.84  E-value=0.32  Score=42.48  Aligned_cols=26  Identities=23%  Similarity=0.549  Sum_probs=0.0

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      .|.|+||+..|++..+|.+|...-|.
T Consensus       116 ~~~C~vC~a~F~S~~~L~~H~~ttHs  141 (1214)
T 3iyl_X          116 SYVCNVCNARFSTMSALSEHLRSDHR  141 (1214)
T ss_dssp             --------------------------
T ss_pred             ceeehhhhhhcCCHHHHHHHHhhccc
Confidence            69999999999999999999777775

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=80.73  E-value=0.35  Score=27.91  Aligned_cols=32  Identities=22%  Similarity=0.210  Sum_probs=24.6

Q ss_pred             hhhccchhhhhcCCChhhHhHHHHcCCCCCCCCc
Q psy11933         39 ALVHACVVCKAQMPDPKTYKQHFENKHPKNDLPE   72 (79)
Q Consensus        39 A~~~~C~vC~~~f~~~k~l~~H~esKHpK~~~p~   72 (79)
                      ...+.|+.|...|+ ...|..|.+. ||+.+..+
T Consensus        41 ~~~~~C~~C~~~~~-~~~l~~H~~~-c~~~~~~~   72 (75)
T 2d9k_A           41 ARTELCGNCGRNVL-VKDLKTHPEV-CGREGSGP   72 (75)
T ss_dssp             HCEEECSSSCCEEE-TTGGGTHHHH-BTTBSSSC
T ss_pred             CCceEcccCCCcCc-HHHHHHHHHH-ccCCcCCC
Confidence            44588999999887 5889999874 88876543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=80.38  E-value=0.81  Score=29.38  Aligned_cols=18  Identities=17%  Similarity=0.152  Sum_probs=7.6

Q ss_pred             hhhhhcCCChhhHhHHHH
Q psy11933         45 VVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        45 ~vC~~~f~~~k~l~~H~e   62 (79)
                      ++|...|.....|..|..
T Consensus       110 ~~C~k~f~~~~~L~~H~~  127 (190)
T 1tf6_A          110 ENCGKAFKKHNQLKVHQF  127 (190)
T ss_dssp             SSSCEECSSHHHHHHHHG
T ss_pred             CCCccccCCHHHHHHHHH
Confidence            334444444444444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	79
d1wvka_	86	Expressed protein At2g23090/F21P24.15 {Thale cress	99.85
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	95.71
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.07
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.7
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	94.56
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.54
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	94.43
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	94.29
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	93.55
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	93.32
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	93.21
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	92.97
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.75
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	92.63
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	92.17
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	91.97
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.25
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.01
d2ct5a1	60	Zinc finger BED domain-containing protein 1 {Human	90.88
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	90.26
d1zu1a2	55	dsRNA-binding protein ZFa (ZNF346, JAZ) {African c	90.16
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	90.11
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.67
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	88.75
d1v6ga2	40	Actin-binding LIM protein 2, abLIM2 {Human (Homo s	88.48
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.12
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	88.06
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	88.02
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	87.92
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	87.47
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	86.8
d1y0jb1	36	U-shaped transcription factor, different fingers {	86.79
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	85.17
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	84.75
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	84.31
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	84.03
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	82.86
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	82.43
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	82.1
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	81.59
d1zu1a1	72	dsRNA-binding protein ZFa (ZNF346, JAZ) {African c	81.46

>d1wvka_ g.82.1.1 (A:) Expressed protein At2g23090/F21P24.15 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: Expressed protein At2g23090/F21P24.15
superfamily: Expressed protein At2g23090/F21P24.15
family: Expressed protein At2g23090/F21P24.15
domain: Expressed protein At2g23090/F21P24.15
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=4.6e-25  Score=141.18  Aligned_cols=71  Identities=27%  Similarity=0.362  Sum_probs=55.7

Q ss_pred             cchH-HHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHhhhhccchhhhhcCCC---hhhHhHHHHcCCCCCCCCchhhhh
Q psy11933          2 ARGQ-QKLQSQAKAQEKQAKAKKQQGHSLLDQKKAAQKALVHACVVCKAQMPD---PKTYKQHFENKHPKNDLPEDLKDV   77 (79)
Q Consensus         2 ~rG~-qK~q~q~r~~~k~~~~~~~~~~s~~sq~ka~~aA~~~~C~vC~~~f~~---~k~l~~H~esKHpK~~~p~e~~~~   77 (79)
                      |+|| ||++ ++|+++..+..+. ++.   |||++|++|++|+|.|||++||+   .+.|.+|+||||||++|.++|=++
T Consensus        10 gGGNg~Ka~-~~Rern~~k~~~a-~k~---SQlk~n~~A~~i~C~vCrqtFm~T~~~~~L~eHae~KHpK~~~~eCFP~l   84 (86)
T d1wvka_          10 GGGNAQKSA-MARAKNLEKAKAA-GKG---SQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHL   84 (86)
T ss_dssp             SCCCSGGGT-TTSTTTCCCSSSS-CSS---CSSCCCCTTCCEEETTTTEEECCSSCSHHHHHHHHTCCSCCGGGTTSGGG
T ss_pred             CCchHHHHH-HHHHHHHHhcccC-Cch---hHHHHHHHhhccCcHHHHhHHHHHcchHHHHHHHHccCCCCCHHHhCccc
Confidence            5677 8885 5555544332221 122   89999999999999999999999   899999999999999998887543

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0016  Score=33.79  Aligned_cols=28  Identities=32%  Similarity=0.609  Sum_probs=25.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      -|+|++|...|.....|+.|....|.++
T Consensus         8 P~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           8 PYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             SEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CEeCCCCcccccchHHHHHHcccccCCC
Confidence            4899999999999999999998888753

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.07  E-value=0.0048  Score=30.55  Aligned_cols=23  Identities=22%  Similarity=0.612  Sum_probs=20.8

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      -|+|++|...|.....|..|...
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~   24 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRS   24 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHT
T ss_pred             cCCCCCCCCCCCCchHcccccCc
Confidence            38999999999999999999873

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.0058  Score=32.19  Aligned_cols=29  Identities=17%  Similarity=0.400  Sum_probs=26.0

Q ss_pred             hhccchhhhhcCCChhhHhHHHHcCCCCC
Q psy11933         40 LVHACVVCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        40 ~~~~C~vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      .-|.|.+|...|.....|..|...-|..+
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~e   32 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSE   32 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCC
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCC
Confidence            34899999999999999999999889764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.0064  Score=31.20  Aligned_cols=26  Identities=23%  Similarity=0.474  Sum_probs=23.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      -|.|++|...|.....|..|...-|.
T Consensus         8 Py~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           8 PYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CEECCCCCCCcCCHhHHHHhCcccCC
Confidence            48999999999999999999986554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.54  E-value=0.0053  Score=30.01  Aligned_cols=23  Identities=22%  Similarity=0.426  Sum_probs=20.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      -|+|+.|-++||..+.|..|.-.
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            47999999999999999999753

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.43  E-value=0.0062  Score=30.07  Aligned_cols=23  Identities=13%  Similarity=0.450  Sum_probs=20.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      -|+|++|...|.....|..|...
T Consensus         3 Py~C~~C~k~F~~~~~L~~H~r~   25 (28)
T d1a1ia2           3 PFQCRICMRNFSRSDHLTTHIRT   25 (28)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH
T ss_pred             CccCCCCcCEecccccccccCCC
Confidence            38999999999999999999763

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.29  E-value=0.01  Score=29.37  Aligned_cols=25  Identities=20%  Similarity=0.481  Sum_probs=22.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      .|.|++|...|.....|..|... |.
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~-Ht   26 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKT-HQ   26 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHG-GG
T ss_pred             CEECCcCCCeecchHHhhhhcCc-cC
Confidence            48999999999999999999875 54

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.013  Score=30.22  Aligned_cols=22  Identities=14%  Similarity=0.304  Sum_probs=20.5

Q ss_pred             hccchhhhhcCCChhhHhHHHH
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      -|.|++|...|.....|..|..
T Consensus        12 py~C~~CgK~F~~~s~L~~H~r   33 (38)
T d2cota2          12 RYKCDECGKSFSHSSDLSKHRR   33 (38)
T ss_dssp             SSBCSSSCCBCSCHHHHHHHHT
T ss_pred             CEecCCCCceeeCHHHHHHhCc
Confidence            4899999999999999999976

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.32  E-value=0.017  Score=29.15  Aligned_cols=27  Identities=30%  Similarity=0.600  Sum_probs=25.0

Q ss_pred             ccchhhhhcCCChhhHhHHHHcCCCCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      |.|+.|--.-.|.+.|+.|...||+|+
T Consensus         3 y~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           3 YQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             ccccccccccccchhhhhhhhcccccC
Confidence            789999988888999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.21  E-value=0.012  Score=28.71  Aligned_cols=21  Identities=14%  Similarity=0.351  Sum_probs=19.7

Q ss_pred             ccchhhhhcCCChhhHhHHHH
Q psy11933         42 HACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      |.|+.|...|.....|.+|..
T Consensus         3 y~C~eCgK~F~~~s~L~~Hqr   23 (26)
T d1x6ea2           3 YKCLECGKAFSQNSGLINHQR   23 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHH
T ss_pred             ccCCCCcCeeccCcccccCcc
Confidence            789999999999999999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.97  E-value=0.014  Score=29.97  Aligned_cols=26  Identities=15%  Similarity=0.475  Sum_probs=22.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      -|.|++|...|.....|..|.. .|..
T Consensus         7 Py~C~~C~k~F~~~~~L~~H~r-~Ht~   32 (35)
T d1srka_           7 PFVCRICLSAFTTKANCARHLK-VHTD   32 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHHG-GGTS
T ss_pred             cccCCCCCCcccChHHHHHHcc-ccCC
Confidence            4899999999999999999976 4654

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.75  E-value=0.015  Score=30.47  Aligned_cols=24  Identities=21%  Similarity=0.432  Sum_probs=22.3

Q ss_pred             hccchhhhhcCCChhhHhHHHHcC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      .|+|+-|..+|....++..|.||=
T Consensus         4 afvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeeecccccchhcchHHHHHhhhc
Confidence            489999999999999999999985

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.63  E-value=0.025  Score=28.91  Aligned_cols=22  Identities=14%  Similarity=0.314  Sum_probs=20.3

Q ss_pred             hccchhhhhcCCChhhHhHHHH
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      -|.|++|...|.....|..|..
T Consensus        11 Py~C~~C~k~F~~~~~L~~H~r   32 (37)
T d1p7aa_          11 PFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHG
T ss_pred             CeEeCCCCCEecCHHHHHHHHh
Confidence            4899999999999999999965

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.17  E-value=0.029  Score=28.51  Aligned_cols=24  Identities=17%  Similarity=0.383  Sum_probs=20.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHcC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENK   64 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esK   64 (79)
                      -|.|+||.+.|-..--+.-|.+|.
T Consensus         3 p~~cpic~qrfkrkdrmsyhvrsh   26 (32)
T d2epqa1           3 PYSCPVCGLRFKRKDRMSYHVRSH   26 (32)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHH
T ss_pred             CcccchHHHHhhccccceEeeecc
Confidence            378999999999988888888763

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.97  E-value=0.024  Score=28.72  Aligned_cols=22  Identities=23%  Similarity=0.391  Sum_probs=20.1

Q ss_pred             hccchhhhhcCCChhhHhHHHH
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      -|.|.+|...|.....|..|..
T Consensus         7 py~C~~Cgk~F~~~~~L~~H~r   28 (33)
T d1x6ea1           7 PYGCVECGKAFSRSSILVQHQR   28 (33)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH
T ss_pred             CeeCCCCCCEeCchHHhHhhcc
Confidence            4899999999999999999965

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.25  E-value=0.035  Score=27.85  Aligned_cols=24  Identities=25%  Similarity=0.726  Sum_probs=22.1

Q ss_pred             ccchh--hhhcCCChhhHhHHHHcCC
Q psy11933         42 HACVV--CKAQMPDPKTYKQHFENKH   65 (79)
Q Consensus        42 ~~C~v--C~~~f~~~k~l~~H~esKH   65 (79)
                      |.|.|  |...+.++++|.-|..+-|
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhC
Confidence            68988  8899999999999999887

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.01  E-value=0.027  Score=32.81  Aligned_cols=24  Identities=38%  Similarity=0.819  Sum_probs=22.9

Q ss_pred             ccchhhhhcCCChhhHhHHHHcC-C
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENK-H   65 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esK-H   65 (79)
                      |-|.+|...|.+..+|..|+.+| |
T Consensus        16 fYCv~C~K~F~se~~l~~H~ksKkH   40 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRSKDH   40 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTCHHH
T ss_pred             EecccccCccCCHHHHHHHHcccHH
Confidence            88999999999999999999998 5

>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: BED zinc finger
domain: Zinc finger BED domain-containing protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.88  E-value=0.038  Score=31.86  Aligned_cols=28  Identities=29%  Similarity=0.557  Sum_probs=24.7

Q ss_pred             hhccchhhhhcCCC---hhhHhHHHHcCCCC
Q psy11933         40 LVHACVVCKAQMPD---PKTYKQHFENKHPK   67 (79)
Q Consensus        40 ~~~~C~vC~~~f~~---~k~l~~H~esKHpK   67 (79)
                      ..++|.+|+.++..   -..|.-|.+.+||-
T Consensus        21 ~~i~C~lC~k~i~~~GNTtNl~~HL~~rHp~   51 (60)
T d2ct5a1          21 KKIYCRICMAQIAYSGNTSNLSYHLEKNHPE   51 (60)
T ss_dssp             SCCEETTTTEECCCCSSTHHHHHHHHHSCHH
T ss_pred             cchHHHHHHHHhcccCCcchHHHHHHhcCHH
Confidence            45899999999988   68899999999983

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.26  E-value=0.039  Score=29.24  Aligned_cols=24  Identities=17%  Similarity=0.279  Sum_probs=21.0

Q ss_pred             hhhccchhhhhcCCChhhHhHHHH
Q psy11933         39 ALVHACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        39 A~~~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      ...|.|++|...|.....|..|..
T Consensus        28 ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1          28 LRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCSEECTTTSCEESSSHHHHHHHT
T ss_pred             ccCCcCCCcCCEecCHHHHHHHHh
Confidence            345999999999999999999964

>d1zu1a2 g.37.1.4 (A:74-128) dsRNA-binding protein ZFa (ZNF346, JAZ) {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: dsRNA-binding protein ZFa (ZNF346, JAZ)
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=90.16  E-value=0.017  Score=32.89  Aligned_cols=27  Identities=30%  Similarity=0.630  Sum_probs=23.1

Q ss_pred             hccchhhhhcCCChhhHhHHHHcC-CCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENK-HPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esK-HpK   67 (79)
                      +--|.+|-.+|-++...++||.-| |.|
T Consensus        21 nk~C~lCn~~Fns~~~AqsHY~GK~H~K   48 (55)
T d1zu1a2          21 SKCCPVCNMTFSSPVVAESHYIGKTHIK   48 (55)
T ss_dssp             TTEETTTTEECSSHHHHHHHHTSHHHHH
T ss_pred             hhhhhhhhcccCCHHHHHHHhhhhHHHH
Confidence            346999999999999999999877 643

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.67  E-value=0.06  Score=26.67  Aligned_cols=22  Identities=23%  Similarity=0.611  Sum_probs=20.3

Q ss_pred             hccchh--hhhcCCChhhHhHHHH
Q psy11933         41 VHACVV--CKAQMPDPKTYKQHFE   62 (79)
Q Consensus        41 ~~~C~v--C~~~f~~~k~l~~H~e   62 (79)
                      .|+|++  |...|.....|+.|..
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLR   25 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             CeeCCCCCCCceECChhHhhhhcC
Confidence            389999  9999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.75  E-value=0.12  Score=25.11  Aligned_cols=22  Identities=27%  Similarity=0.566  Sum_probs=20.1

Q ss_pred             ccchhhhhcCCChhhHhHHHHc
Q psy11933         42 HACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      ++|.||..-|...-.|+.|.++
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~   23 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRC   23 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGG
T ss_pred             CccchhhhHhcchhHHHHHhhc
Confidence            5799999999999999999886

>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: LIM domain
domain: Actin-binding LIM protein 2, abLIM2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.48  E-value=0.043  Score=29.25  Aligned_cols=12  Identities=33%  Similarity=1.007  Sum_probs=10.9

Q ss_pred             ccchhhhhcCCC
Q psy11933         42 HACVVCKAQMPD   53 (79)
Q Consensus        42 ~~C~vC~~~f~~   53 (79)
                      |+|.|||+.||-
T Consensus         1 FvC~vCr~pFP~   12 (40)
T d1v6ga2           1 FVCAVCRLPFPP   12 (40)
T ss_dssp             SSCSSSCCCCCS
T ss_pred             CcccccCCCCCC
Confidence            689999999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.12  E-value=0.07  Score=26.32  Aligned_cols=23  Identities=13%  Similarity=0.319  Sum_probs=20.6

Q ss_pred             hccchh--hhhcCCChhhHhHHHHc
Q psy11933         41 VHACVV--CKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~v--C~~~f~~~k~l~~H~es   63 (79)
                      -|+|++  |...|.....|+.|...
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~   26 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRI   26 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CccCCCCCCCceECcHHHcCccccc
Confidence            389998  99999999999999863

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.06  E-value=0.12  Score=25.79  Aligned_cols=23  Identities=13%  Similarity=0.270  Sum_probs=20.8

Q ss_pred             hccchh--hhhcCCChhhHhHHHHc
Q psy11933         41 VHACVV--CKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~v--C~~~f~~~k~l~~H~es   63 (79)
                      .|.|++  |...|.....|..|...
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~r~   27 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             CeECcCCCCCCeeCCHHHHHHHhhh
Confidence            489999  99999999999999774

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.02  E-value=0.072  Score=26.60  Aligned_cols=23  Identities=22%  Similarity=0.530  Sum_probs=20.5

Q ss_pred             hccchhhhhcCCChhhHhHHHHc
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~es   63 (79)
                      .|.|++|.-+|-..-.|..|.-|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvs   26 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVS   26 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH
T ss_pred             eEEeHHHHHHHHHHHhheeeeec
Confidence            48899999999999899999865

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.92  E-value=0.11  Score=27.20  Aligned_cols=26  Identities=19%  Similarity=0.512  Sum_probs=22.2

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPK   67 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK   67 (79)
                      .|+|.+|...|++...|--|.. -|-+
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~-~Hr~   30 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMN-VHRR   30 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHH-TTCC
T ss_pred             ccCCCCCCCccCCcccccchHh-hhcc
Confidence            5899999999999999999964 5543

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.47  E-value=0.1  Score=25.69  Aligned_cols=26  Identities=15%  Similarity=0.420  Sum_probs=23.8

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHp   66 (79)
                      +++|+-|.+.....+-|.-|..|-|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            58999999999999999999999885

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.80  E-value=0.14  Score=25.45  Aligned_cols=26  Identities=23%  Similarity=0.533  Sum_probs=23.8

Q ss_pred             ccchhhhhcCCChhhHhHHHHcC-CCC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENK-HPK   67 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esK-HpK   67 (79)
                      |.|..|--.|-..-.|.-|..|| |.|
T Consensus         2 y~C~~CnF~FKTKGNLTKHmkSKaH~k   28 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMKSKAHSK   28 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             cccceeeeeEeeccchhHhhhhhhhcc
Confidence            68999999999999999999999 765

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.79  E-value=0.14  Score=26.43  Aligned_cols=21  Identities=24%  Similarity=0.559  Sum_probs=19.4

Q ss_pred             hccchhhhhcCCChhhHhHHH
Q psy11933         41 VHACVVCKAQMPDPKTYKQHF   61 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~   61 (79)
                      .++|+-|.-.|.+.++|+-|.
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            489999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.17  E-value=0.13  Score=26.21  Aligned_cols=25  Identities=24%  Similarity=0.449  Sum_probs=21.8

Q ss_pred             hccchh--hhhcCCChhhHhHHHHcCCC
Q psy11933         41 VHACVV--CKAQMPDPKTYKQHFENKHP   66 (79)
Q Consensus        41 ~~~C~v--C~~~f~~~k~l~~H~esKHp   66 (79)
                      +|.|++  |...|.....|+.|..+ |.
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~-Ht   27 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKL-HS   27 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHH-HH
T ss_pred             CeECCCCCCCCeeCChhHhccccCe-eC
Confidence            478988  99999999999999886 54

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.75  E-value=0.18  Score=24.49  Aligned_cols=21  Identities=19%  Similarity=0.336  Sum_probs=18.2

Q ss_pred             ccchhhhhcCCChhhHhHHHH
Q psy11933         42 HACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      ++|++|-.+|.+.--|+-|-+
T Consensus         1 vqcp~c~k~f~skyylkvhnr   21 (27)
T d2dlqa4           1 VECPTCHKKFLSKYYLKVHNR   21 (27)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             CcCcchHHHHHHhHhhhhccc
Confidence            479999999999888888865

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.31  E-value=0.19  Score=27.97  Aligned_cols=29  Identities=24%  Similarity=0.503  Sum_probs=22.6

Q ss_pred             hccchhhhhcCCChhhHhHHHHcCCCCCCC
Q psy11933         41 VHACVVCKAQMPDPKTYKQHFENKHPKNDL   70 (79)
Q Consensus        41 ~~~C~vC~~~f~~~k~l~~H~esKHpK~~~   70 (79)
                      .+-|-+|...|+++..|++|- +-|--+.+
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HE-AQHG~t~l   34 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHE-AQHGVTSL   34 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHH-HHHTTTSC
T ss_pred             eeeccccccccCCHHHHhHhH-HhcCcceE
Confidence            477999999999999999994 35544433

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.03  E-value=0.27  Score=24.18  Aligned_cols=26  Identities=15%  Similarity=0.455  Sum_probs=21.9

Q ss_pred             ccch--hhhhcCCChhhHhHHHHcCCCCC
Q psy11933         42 HACV--VCKAQMPDPKTYKQHFENKHPKN   68 (79)
Q Consensus        42 ~~C~--vC~~~f~~~k~l~~H~esKHpK~   68 (79)
                      |+|+  -|...|.....|..|.. .|.++
T Consensus         3 f~C~~~~C~k~F~~~~~L~~H~r-~Htge   30 (31)
T d1sp2a_           3 FMCTWSYCGKRFTRSDELQRHKR-THTGE   30 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHT-TTSCC
T ss_pred             CCCcCCCCCcCcCChhHhhhhcC-ccccc
Confidence            7896  59999999999999997 47653

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.86  E-value=0.12  Score=27.62  Aligned_cols=23  Identities=13%  Similarity=0.457  Sum_probs=20.5

Q ss_pred             hhccchh--hhhcCCChhhHhHHHH
Q psy11933         40 LVHACVV--CKAQMPDPKTYKQHFE   62 (79)
Q Consensus        40 ~~~~C~v--C~~~f~~~k~l~~H~e   62 (79)
                      ..|+|.+  |...|.....|+.|..
T Consensus        17 kpy~C~~~~C~k~F~~~~~L~~H~r   41 (47)
T d1ncsa_          17 KTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             TEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             CCeECCcCCCCccccCchHHHhhcc
Confidence            3599998  9999999999999975

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.43  E-value=0.15  Score=24.91  Aligned_cols=21  Identities=24%  Similarity=0.586  Sum_probs=19.4

Q ss_pred             ccchh--hhhcCCChhhHhHHHH
Q psy11933         42 HACVV--CKAQMPDPKTYKQHFE   62 (79)
Q Consensus        42 ~~C~v--C~~~f~~~k~l~~H~e   62 (79)
                      |+|++  |...|.....|..|..
T Consensus         3 ~~C~~~gC~k~F~~~~~L~~H~r   25 (29)
T d1a1ia1           3 YACPVESCDRRFSRSADLTRHIR   25 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHTH
T ss_pred             eECCCCCCCcEECchhHhhhhcC
Confidence            78988  9999999999999976

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.10  E-value=0.19  Score=24.49  Aligned_cols=22  Identities=18%  Similarity=0.501  Sum_probs=19.8

Q ss_pred             ccchh--hhhcCCChhhHhHHHHc
Q psy11933         42 HACVV--CKAQMPDPKTYKQHFEN   63 (79)
Q Consensus        42 ~~C~v--C~~~f~~~k~l~~H~es   63 (79)
                      |+|+.  |...|.....|+.|...
T Consensus         3 f~C~~~gC~K~F~~~~~L~~H~r~   26 (28)
T d1ubdc4           3 YVCPFDGCNKKFAQSTNLKSHILT   26 (28)
T ss_dssp             CCCCSTTCCCCCSSTTTTHHHHHH
T ss_pred             cCCCCCCcCCcCCCHHHHHHHHhh
Confidence            78999  99999999999999863

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.59  E-value=0.22  Score=24.43  Aligned_cols=21  Identities=24%  Similarity=0.540  Sum_probs=19.2

Q ss_pred             ccchhhhhcCCChhhHhHHHH
Q psy11933         42 HACVVCKAQMPDPKTYKQHFE   62 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~e   62 (79)
                      ++|..|...|.-...|+.|+-
T Consensus         3 hvc~ecgkaf~essklkrh~l   23 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQL   23 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGG
T ss_pred             chHHHHhHHHHHHHHHHHHhh
Confidence            689999999999999999975

>d1zu1a1 g.37.1.4 (A:2-73) dsRNA-binding protein ZFa (ZNF346, JAZ) {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: dsRNA-binding protein ZFa (ZNF346, JAZ)
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=81.46  E-value=0.25  Score=29.09  Aligned_cols=25  Identities=24%  Similarity=0.585  Sum_probs=22.4

Q ss_pred             ccchhhhhcCCChhhHhHHHHcC-CC
Q psy11933         42 HACVVCKAQMPDPKTYKQHFENK-HP   66 (79)
Q Consensus        42 ~~C~vC~~~f~~~k~l~~H~esK-Hp   66 (79)
                      ..|.||..+....++-..||++| |.
T Consensus        33 ~~CkvC~a~L~seSQriaHYeskkHa   58 (72)
T d1zu1a1          33 TQCKVCSAVLISESQKLAHYQSRKHA   58 (72)
T ss_dssp             SEETTTTEECCSHHHHHHHHHCHHHH
T ss_pred             hhHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            46999999999999999999997 53