Psyllid ID: psy12097

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70----
Protein Sequence
MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHcccHHHHHHHHccccccccccHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcHHHHHHHccHHHHcccccHHHHHcHcc
Coil and Loop (DISEMBL)
msqvnppctlehpenqsrvDYIHNvasahdfdyppefYDIAEELWKdkgvqacfersneyqliDCAKYLVSLVK
Flexible Loop (DISEMBL)
msqvnppctlehpenqSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFErsneyqlidcAKYLVSLVK
Low Complexity Region (SEG)
MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK
Disordered region (IsUnstruct)
******************VDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSL**
Disordered Region (DISOPRED)
*SQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK
Disordered Region (DISEMBL)
********TLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK
Disordered Region (DISPRO)
**QVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	74	2.2.26 [Sep-21-2011]
Q7PD79	383	Guanine nucleotide-bindin	yes	N/A	0.986	0.190	0.671	2e-24
P30684	376	Guanine nucleotide-bindin	N/A	N/A	0.986	0.194	0.657	1e-23
O16118	379	Guanine nucleotide-bindin	N/A	N/A	0.986	0.192	0.671	1e-23
Q292P9	382	Guanine nucleotide-bindin	yes	N/A	0.986	0.191	0.643	4e-22
P20354	385	Guanine nucleotide-bindin	yes	N/A	0.986	0.189	0.643	4e-22
P29797	397	Guanine nucleotide-bindin	no	N/A	0.986	0.183	0.602	3e-21
P63091	394	Guanine nucleotide-bindin	yes	N/A	0.986	0.185	0.602	3e-21
P63092	394	Guanine nucleotide-bindin	yes	N/A	0.986	0.185	0.602	3e-21
P04896	394	Guanine nucleotide-bindin	yes	N/A	0.986	0.185	0.602	3e-21
Q5JWF2	1037	Guanine nucleotide-bindin	no	N/A	0.986	0.070	0.602	4e-21

>sp|Q7PD79|GNAS_ANOGA Guanine nucleotide-binding protein G(s) subunit alpha OS=Anopheles gambiae GN=G-s-alpha-60A PE=2 SV=1

 Score =  110 bits (276), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/73 (67%), Positives = 57/73 (78%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  LE PENQ+RVDYI + AS  DF+YPPEFY+  EELWKD+GVQ  +ERSNEY
Sbjct: 99  MSTLTPPIQLEKPENQARVDYIQDYASGPDFNYPPEFYEHTEELWKDRGVQQTYERSNEY 158

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 159 QLIDCAKYFLDRV 171

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase. Participates in olfactory signal transduction.
Anopheles gambiae (taxid: 7165)

>sp|P30684|GNAS_LYMST Guanine nucleotide-binding protein G(s) subunit alpha OS=Lymnaea stagnalis PE=2 SV=1

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 58/73 (79%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS +NPP  LEHP+N+++VDYI + AS  +FDYPP FY+  E LWKDKGVQA FERSNEY
Sbjct: 92  MSTLNPPVQLEHPQNKAKVDYIQDKASQAEFDYPPIFYEYTEILWKDKGVQAAFERSNEY 151

Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  V
Sbjct: 152 QLIDCAQYFLDRV 164

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase in response to beta-adrenergic stimuli.

Lymnaea stagnalis (taxid: 6523)

>sp|O16118|GNAS_HOMAM Guanine nucleotide-binding protein G(s) subunit alpha OS=Homarus americanus PE=2 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 49/73 (67%), Positives = 57/73 (78%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  LE+P +Q RVDYI +VAS  DFDYP EFY+  E LWKDKGVQAC+ER+NEY
Sbjct: 95  MSTLTPPIALENPAHQFRVDYIQDVASQKDFDYPEEFYEHTEMLWKDKGVQACYERANEY 154

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 155 QLIDCAKYFLDRV 167

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase in response to beta-adrenergic stimuli.

Homarus americanus (taxid: 6706)

>sp|Q292P9|GNAS_DROPS Guanine nucleotide-binding protein G(s) subunit alpha OS=Drosophila pseudoobscura pseudoobscura GN=G-salpha60A PE=3 SV=1

 Score =  103 bits (256), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/73 (64%), Positives = 56/73 (76%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS +NPP  LE  EN+ RV+YI + AS+ DF+YPPEFY+  EELWKDKGV   +ERSNEY
Sbjct: 98  MSTLNPPVALEKKENEPRVEYIQDYASSPDFNYPPEFYEHTEELWKDKGVLQTYERSNEY 157

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 158 QLIDCAKYFLDRV 170

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|P20354|GNAS_DROME Guanine nucleotide-binding protein G(s) subunit alpha OS=Drosophila melanogaster GN=G-salpha60A PE=2 SV=1

 Score =  103 bits (256), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/73 (64%), Positives = 56/73 (76%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS +NPP  LE  EN+ RV+YI + AS+ DF+YPPEFY+  EELWKDKGV   +ERSNEY
Sbjct: 98  MSTLNPPVALEKKENEPRVEYIQDYASSPDFNYPPEFYEHTEELWKDKGVLQTYERSNEY 157

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 158 QLIDCAKYFLDRV 170

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase.

Drosophila melanogaster (taxid: 7227)

>sp|P29797|GNAS_PIG Guanine nucleotide-binding protein G(s) subunit alpha OS=Sus scrofa GN=GNAS PE=2 SV=1

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 95  MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 154

Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  +
Sbjct: 155 QLIDCAQYFLDKI 167

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase in response to beta-adrenergic stimuli.

Sus scrofa (taxid: 9823)

>sp|P63091|GNAS_CANFA Guanine nucleotide-binding protein G(s) subunit alpha OS=Canis familiaris GN=GNAS PE=2 SV=1

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 110 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 169

Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  +
Sbjct: 170 QLIDCAQYFLDKI 182

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase in response to beta-adrenergic stimuli.

Canis familiaris (taxid: 9615)

>sp|P63092|GNAS2_HUMAN Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Homo sapiens GN=GNAS PE=1 SV=1

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 110 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 169

Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  +
Sbjct: 170 QLIDCAQYFLDKI 182

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase in response to beta-adrenergic stimuli.

Homo sapiens (taxid: 9606)

>sp|P04896|GNAS2_BOVIN Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Bos taurus GN=GNAS PE=1 SV=1

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 110 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 169

Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  +
Sbjct: 170 QLIDCAQYFLDKI 182

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase in response to beta-adrenergic stimuli.

Bos taurus (taxid: 9913)

>sp|Q5JWF2|GNAS1_HUMAN Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Homo sapiens GN=GNAS PE=1 SV=2

 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 753 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 812

Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  +
Sbjct: 813 QLIDCAQYFLDKI 825

Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase in response to beta-adrenergic stimuli. XLas isoforms interact with the same set of receptors as Gnas isoforms.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
242022816	380	guanine nucleotide-binding protein G, pu	0.986	0.192	0.753	3e-26
341575558	378	G-protein alpha s subunit [Lygus hesperu	0.986	0.193	0.739	4e-25
350403292	382	PREDICTED: guanine nucleotide-binding pr	0.986	0.191	0.712	6e-24
321477468	379	guanine nucleotide binding protein, alph	0.986	0.192	0.698	7e-24
380021578	205	PREDICTED: guanine nucleotide-binding pr	0.986	0.356	0.684	1e-23
380021580	216	PREDICTED: guanine nucleotide-binding pr	0.986	0.337	0.684	1e-23
340728378	382	PREDICTED: guanine nucleotide-binding pr	0.986	0.191	0.698	2e-23
48095594	381	PREDICTED: guanine nucleotide-binding pr	0.986	0.191	0.684	4e-23
383865975	381	PREDICTED: guanine nucleotide-binding pr	0.986	0.191	0.684	6e-23
307199451	161	Guanine nucleotide-binding protein G(s)	0.905	0.416	0.716	7e-23

>gi|242022816|ref|XP_002431834.1| guanine nucleotide-binding protein G, putative [Pediculus humanus corporis] gi|212517166|gb|EEB19096.1| guanine nucleotide-binding protein G, putative [Pediculus humanus corporis]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 60/73 (82%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  LEHPENQ RVDYI +VAS+HDFDYPPEFY+  E LWKDKGVQ CFERSNEY
Sbjct: 96  MSTLTPPIPLEHPENQVRVDYIQDVASSHDFDYPPEFYEHTEILWKDKGVQTCFERSNEY 155

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 156 QLIDCAKYFLDRV 168

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|341575558|gb|AEK80436.1| G-protein alpha s subunit [Lygus hesperus]

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/73 (73%), Positives = 60/73 (82%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS ++PP  LEHP NQ RVDYI +VAS  DFDYPPEFY+ AE LWKD+GVQACFERSNEY
Sbjct: 95  MSTLSPPIALEHPANQVRVDYIQDVASQPDFDYPPEFYEHAEILWKDRGVQACFERSNEY 154

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 155 QLIDCAKYFLDRV 167

Source: Lygus hesperus

Species: Lygus hesperus

Genus: Lygus

Family: Miridae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350403292|ref|XP_003486758.1| PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha-like [Bombus impatiens]

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 57/73 (78%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  LE P NQS+VDYI  V+SA DFDYPPEFYDI E LWKD+GVQ  FERSNEY
Sbjct: 96  MSTLTPPVALEDPANQSKVDYILEVSSATDFDYPPEFYDIVETLWKDRGVQQSFERSNEY 155

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 156 QLIDCAKYFLDKV 168

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321477468|gb|EFX88427.1| guanine nucleotide binding protein, alpha stimulating activity polypeptide [Daphnia pulex]

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 51/73 (69%), Positives = 59/73 (80%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP +LE+P NQ RVDYI +VAS  DFDYPPEFYD  E LW+D+GVQAC+ERSNEY
Sbjct: 95  MSTLTPPVSLENPANQFRVDYIQDVASQPDFDYPPEFYDYTEVLWQDRGVQACYERSNEY 154

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 155 QLIDCAKYFLDRV 167

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021578|ref|XP_003694639.1| PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha-like isoform 1 [Apis florea]

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 57/73 (78%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  LE P NQS+VDYI  V+++ DFDYPPEFYDI E LWKD+GVQ  FERSNEY
Sbjct: 95  MSTLTPPVALEDPANQSKVDYIQEVSNSPDFDYPPEFYDIVEALWKDRGVQQSFERSNEY 154

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 155 QLIDCAKYFLDKV 167

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021580|ref|XP_003694640.1| PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha-like isoform 2 [Apis florea]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 57/73 (78%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  LE P NQS+VDYI  V+++ DFDYPPEFYDI E LWKD+GVQ  FERSNEY
Sbjct: 106 MSTLTPPVALEDPANQSKVDYIQEVSNSPDFDYPPEFYDIVEALWKDRGVQQSFERSNEY 165

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 166 QLIDCAKYFLDKV 178

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340728378|ref|XP_003402502.1| PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha-like [Bombus terrestris]

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/73 (69%), Positives = 57/73 (78%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           M+ + PP  LE P NQS+VDYI  V+SA DFDYPPEFYDI E LWKD+GVQ  FERSNEY
Sbjct: 96  MNTLTPPVALEDPANQSKVDYILEVSSATDFDYPPEFYDIVETLWKDRGVQQSFERSNEY 155

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 156 QLIDCAKYFLDKV 168

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48095594|ref|XP_394484.1| PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha-like isoform 1 [Apis mellifera]

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 57/73 (78%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  LE P NQS+VDYI  V+++ DFDYPPEFYDI E LWKD+GVQ  FERSNEY
Sbjct: 95  MSTLTPPVALEDPANQSKVDYIQEVSNSPDFDYPPEFYDIVEALWKDRGVQQSFERSNEY 154

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 155 QLIDCAKYFLDKV 167

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865975|ref|XP_003708447.1| PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha-like [Megachile rotundata]

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 57/73 (78%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  LE P NQS VDY+ NV+S+ DFDYPPEFY+I E LWKD+GVQ  FERSNEY
Sbjct: 95  MSTLTPPVALEDPANQSNVDYVLNVSSSPDFDYPPEFYEIVETLWKDRGVQQSFERSNEY 154

Query: 61  QLIDCAKYLVSLV 73
           QLIDCAKY +  V
Sbjct: 155 QLIDCAKYFLDKV 167

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307199451|gb|EFN80064.1| Guanine nucleotide-binding protein G(s) subunit alpha [Harpegnathos saltator]

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 55/67 (82%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           M+ + PP TLE P NQSRVDY+  V+S+ DFDYPPEFY+I E LWKD+GVQ  FERSNEY
Sbjct: 95  MNTLTPPVTLEDPSNQSRVDYVLEVSSSPDFDYPPEFYEIVESLWKDRGVQQSFERSNEY 154

Query: 61  QLIDCAK 67
           QLIDCAK
Sbjct: 155 QLIDCAK 161

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
UNIPROTKB|Q7PD79	383	G-s-alpha-60A "Guanine nucleot	0.986	0.190	0.671	2.3e-23
UNIPROTKB|Q292P9	382	G-salpha60A "Guanine nucleotid	0.986	0.191	0.643	5.6e-22
FB|FBgn0001123	385	Galphas "G protein alpha s sub	0.986	0.189	0.643	6.1e-22
UNIPROTKB|Q6X973	340	Q6X973 "Guanine nucleotide-bin	0.986	0.214	0.616	9e-22
UNIPROTKB|F1N0T0	347	GNAS "GAIPIRRH peptide" [Bos t	0.986	0.210	0.602	2.4e-21
UNIPROTKB|G1K1V2	332	GNAS "GAIPIRRH peptide" [Bos t	0.986	0.219	0.602	2.4e-21
UNIPROTKB|J9P7G0	346	GNAS "Guanine nucleotide-bindi	0.986	0.210	0.602	2.4e-21
UNIPROTKB|H0Y7F4	199	GNAS "Guanine nucleotide-bindi	0.986	0.366	0.602	2.4e-21
UNIPROTKB|A5GFU4	318	GNAS "Guanine nucleotide-bindi	0.986	0.229	0.602	2.4e-21
UNIPROTKB|A5GFU6	379	GNAS "Guanine nucleotide-bindi	0.986	0.192	0.602	2.9e-21

UNIPROTKB|Q7PD79 G-s-alpha-60A "Guanine nucleotide-binding protein G(s) subunit alpha" [Anopheles gambiae (taxid:7165)]

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 49/73 (67%), Positives = 57/73 (78%)

Query:     1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
             MS + PP  LE PENQ+RVDYI + AS  DF+YPPEFY+  EELWKD+GVQ  +ERSNEY
Sbjct:    99 MSTLTPPIQLEKPENQARVDYIQDYASGPDFNYPPEFYEHTEELWKDRGVQQTYERSNEY 158

Query:    61 QLIDCAKYLVSLV 73
             QLIDCAKY +  V
Sbjct:   159 QLIDCAKYFLDRV 171

GO:0001664 "G-protein coupled receptor binding" evidence=ISS

GO:0003924 "GTPase activity" evidence=ISS

GO:0004871 "signal transducer activity" evidence=ISS

GO:0005834 "heterotrimeric G-protein complex" evidence=ISS

GO:0007191 "adenylate cyclase-activating dopamine receptor signaling pathway" evidence=ISS

GO:0007606 "sensory perception of chemical stimulus" evidence=ISS

GO:0031234 "extrinsic to internal side of plasma membrane" evidence=ISS

GO:0031683 "G-protein beta/gamma-subunit complex binding" evidence=ISS

UNIPROTKB|Q292P9 G-salpha60A "Guanine nucleotide-binding protein G(s) subunit alpha" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 256 (95.2 bits), Expect = 5.6e-22, P = 5.6e-22
 Identities = 47/73 (64%), Positives = 56/73 (76%)

Query:     1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
             MS +NPP  LE  EN+ RV+YI + AS+ DF+YPPEFY+  EELWKDKGV   +ERSNEY
Sbjct:    98 MSTLNPPVALEKKENEPRVEYIQDYASSPDFNYPPEFYEHTEELWKDKGVLQTYERSNEY 157

Query:    61 QLIDCAKYLVSLV 73
             QLIDCAKY +  V
Sbjct:   158 QLIDCAKYFLDRV 170

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISS

GO:0007268 "synaptic transmission" evidence=ISS

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=ISS

GO:0007528 "neuromuscular junction development" evidence=ISS

FB|FBgn0001123 Galphas "G protein alpha s subunit" [Drosophila melanogaster (taxid:7227)]

 Score = 256 (95.2 bits), Expect = 6.1e-22, P = 6.1e-22
 Identities = 47/73 (64%), Positives = 56/73 (76%)

Query:     1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
             MS +NPP  LE  EN+ RV+YI + AS+ DF+YPPEFY+  EELWKDKGV   +ERSNEY
Sbjct:    98 MSTLNPPVALEKKENEPRVEYIQDYASSPDFNYPPEFYEHTEELWKDKGVLQTYERSNEY 157

Query:    61 QLIDCAKYLVSLV 73
             QLIDCAKY +  V
Sbjct:   158 QLIDCAKYFLDRV 170

GO:0005604 "basement membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;IBA;NAS

GO:0003924 "GTPase activity" evidence=ISS;IBA;NAS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS;NAS

GO:0007190 "activation of adenylate cyclase activity" evidence=NAS

GO:0002165 "instar larval or pupal development" evidence=NAS

GO:0048148 "behavioral response to cocaine" evidence=NAS

GO:0007611 "learning or memory" evidence=NAS

GO:0007632 "visual behavior" evidence=NAS

GO:0007268 "synaptic transmission" evidence=IMP

GO:0005525 "GTP binding" evidence=IEA

GO:0006184 "GTP catabolic process" evidence=IEA

GO:0007528 "neuromuscular junction development" evidence=IMP

GO:0050916 "sensory perception of sweet taste" evidence=IMP

GO:0010353 "response to trehalose stimulus" evidence=IMP

GO:0035220 "wing disc development" evidence=IGI;IMP

GO:0022416 "chaeta development" evidence=IGI;IMP

GO:0031234 "extrinsic to internal side of plasma membrane" evidence=IBA

GO:0031683 "G-protein beta/gamma-subunit complex binding" evidence=IBA

GO:0007191 "adenylate cyclase-activating dopamine receptor signaling pathway" evidence=IBA

GO:0004871 "signal transducer activity" evidence=IBA

GO:0001664 "G-protein coupled receptor binding" evidence=IBA

UNIPROTKB|Q6X973 Q6X973 "Guanine nucleotide-binding protein Gs alpha1" [Oryctolagus cuniculus (taxid:9986)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 45/73 (61%), Positives = 58/73 (79%)

Query:     1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
             MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GVQAC+ERSNEY
Sbjct:    56 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVQACYERSNEY 115

Query:    61 QLIDCAKYLVSLV 73
             QLIDCA+Y +  +
Sbjct:   116 QLIDCAQYFLDKI 128

GO:0005886 "plasma membrane" evidence=TAS

UNIPROTKB|F1N0T0 GNAS "GAIPIRRH peptide" [Bos taurus (taxid:9913)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query:     1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
             MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct:    63 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 122

Query:    61 QLIDCAKYLVSLV 73
             QLIDCA+Y +  +
Sbjct:   123 QLIDCAQYFLDKI 135

GO:0071514 "genetic imprinting" evidence=IEA

GO:0051216 "cartilage development" evidence=IEA

GO:0048701 "embryonic cranial skeleton morphogenesis" evidence=IEA

GO:0045672 "positive regulation of osteoclast differentiation" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0043588 "skin development" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0040032 "post-embryonic body morphogenesis" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007610 "behavior" evidence=IEA

GO:0007191 "adenylate cyclase-activating dopamine receptor signaling pathway" evidence=IEA

GO:0006306 "DNA methylation" evidence=IEA

GO:0006112 "energy reserve metabolic process" evidence=IEA

GO:0001958 "endochondral ossification" evidence=IEA

GO:0001894 "tissue homeostasis" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0031683 "G-protein beta/gamma-subunit complex binding" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

UNIPROTKB|G1K1V2 GNAS "GAIPIRRH peptide" [Bos taurus (taxid:9913)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query:     1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
             MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct:    48 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 107

Query:    61 QLIDCAKYLVSLV 73
             QLIDCA+Y +  +
Sbjct:   108 QLIDCAQYFLDKI 120

GO:0005525 "GTP binding" evidence=IEA

GO:0031683 "G-protein beta/gamma-subunit complex binding" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

UNIPROTKB|J9P7G0 GNAS "Guanine nucleotide-binding protein G(s) subunit alpha" [Canis lupus familiaris (taxid:9615)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query:     1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
             MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct:    65 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 124

Query:    61 QLIDCAKYLVSLV 73
             QLIDCA+Y +  +
Sbjct:   125 QLIDCAQYFLDKI 137

GO:0005525 "GTP binding" evidence=IEA

GO:0031683 "G-protein beta/gamma-subunit complex binding" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

UNIPROTKB|H0Y7F4 GNAS "Guanine nucleotide-binding protein G(s) subunit alpha isoforms short" [Homo sapiens (taxid:9606)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query:     1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
             MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct:   125 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 184

Query:    61 QLIDCAKYLVSLV 73
             QLIDCA+Y +  +
Sbjct:   185 QLIDCAQYFLDKI 197

GO:0003924 "GTPase activity" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0031683 "G-protein beta/gamma-subunit complex binding" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

UNIPROTKB|A5GFU4 GNAS "Guanine nucleotide-binding protein G(s) subunit alpha" [Sus scrofa (taxid:9823)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query:     1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
             MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct:    96 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 155

Query:    61 QLIDCAKYLVSLV 73
             QLIDCA+Y +  +
Sbjct:   156 QLIDCAQYFLDKI 168

GO:0005525 "GTP binding" evidence=IEA

GO:0031683 "G-protein beta/gamma-subunit complex binding" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

UNIPROTKB|A5GFU6 GNAS "Guanine nucleotide-binding protein G(s) subunit alpha" [Sus scrofa (taxid:9823)]

 Score = 250 (93.1 bits), Expect = 2.9e-21, P = 2.9e-21
 Identities = 44/73 (60%), Positives = 58/73 (79%)

Query:     1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
             MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct:    95 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 154

Query:    61 QLIDCAKYLVSLV 73
             QLIDCA+Y +  +
Sbjct:   155 QLIDCAQYFLDKI 167

GO:0005525 "GTP binding" evidence=IEA

GO:0031683 "G-protein beta/gamma-subunit complex binding" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P20354	GNAS_DROME	No assigned EC number	0.6438	0.9864	0.1896	yes	N/A
Q7PD79	GNAS_ANOGA	No assigned EC number	0.6712	0.9864	0.1906	yes	N/A
P63094	GNAS2_MOUSE	No assigned EC number	0.5890	0.9864	0.1852	yes	N/A
P63095	GNAS2_RAT	No assigned EC number	0.5890	0.9864	0.1852	yes	N/A
P63092	GNAS2_HUMAN	No assigned EC number	0.6027	0.9864	0.1852	yes	N/A
P63091	GNAS_CANFA	No assigned EC number	0.6027	0.9864	0.1852	yes	N/A
P04896	GNAS2_BOVIN	No assigned EC number	0.6027	0.9864	0.1852	yes	N/A
Q8R4A8	GNAS_CRIGR	No assigned EC number	0.5890	0.9864	0.1852	yes	N/A
Q292P9	GNAS_DROPS	No assigned EC number	0.6438	0.9864	0.1910	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	74
cd00066	315	cd00066, G-alpha, Alpha subunit of G proteins (gua	5e-22
smart00275	342	smart00275, G_alpha, G protein alpha subunit	1e-15
pfam00503	329	pfam00503, G-alpha, G-protein alpha subunit	1e-13

>gnl|CDD|206639 cd00066, G-alpha, Alpha subunit of G proteins (guanine nucleotide binding)

 Score = 85.7 bits (213), Expect = 5e-22
 Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 3/69 (4%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVA-SAHDFDYPPEFYDIAEELWKDKGVQACFERSNE 59
           M  +N P     PEN+     I ++A  A +   PPE  +  + LWKD G+QAC++R NE
Sbjct: 55  METLNIP--YGDPENEKDAKKILSLAPRAEEGPLPPELAEAIKRLWKDPGIQACYDRRNE 112

Query: 60  YQLIDCAKY 68
           YQL D AKY
Sbjct: 113 YQLNDSAKY 121

The alpha subunit of G proteins contains the guanine nucleotide binding site. The heterotrimeric GNP-binding proteins are signal transducers that communicate signals from many hormones, neurotransmitters, chemokines, and autocrine and paracrine factors. Extracellular signals are received by receptors, which activate the G proteins, which in turn route the signals to several distinct intracellular signaling pathways. The alpha subunit of G proteins is a weak GTPase. In the resting state, heterotrimeric G proteins are associated at the cytosolic face of the plasma membrane and the alpha subunit binds to GDP. Upon activation by a receptor GDP is replaced with GTP, and the G-alpha/GTP complex dissociates from the beta and gamma subunits. This results in activation of downstream signaling pathways, such as cAMP synthesis by adenylyl cyclase, which is terminated when GTP is hydrolized and the heterotrimers reconstitute. Length = 315

>gnl|CDD|214595 smart00275, G_alpha, G protein alpha subunit

 Score = 68.4 bits (168), Expect = 1e-15
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 9   TLEHPENQSRVDYI---HNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDC 65
             E PE+   +  I    N     +   P E     + LWKD+G+Q C+ R NE+QL D 
Sbjct: 82  PFEDPESILDIRIITEQFNKTDETENVLPKEIAKAIKALWKDEGIQECYRRRNEFQLNDS 141

Query: 66  AKY 68
           A Y
Sbjct: 142 ASY 144

Subunit of G proteins that contains the guanine nucleotide binding site. Length = 342

>gnl|CDD|215955 pfam00503, G-alpha, G-protein alpha subunit

 Score = 63.0 bits (154), Expect = 1e-13
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVAS----AHDFDYPPEFYDIAEELWKDKGVQACFER 56
           +  +    +   PEN+     + ++        +  +  E  +  +ELW D G+Q  + R
Sbjct: 57  LENLEIESSNSKPENEEIAKKLKSILDSLLDVDETRFSEELAEDIKELWNDPGIQEVYNR 116

Query: 57  SNEYQLIDCAKY 68
           SNE+QL D AKY
Sbjct: 117 SNEFQLSDSAKY 128

G proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like family form a ring of residues centered on the nucleotide binding site. A Ggamma is found fused to an inactive Galpha in the Dictyostelium protein gbqA. Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	74
KOG0099|consensus	379		99.86
KOG0085|consensus	359		99.8
KOG0082|consensus	354		99.77
cd00066	317	G-alpha G protein alpha subunit. The alpha subunit	99.66
smart00275	342	G_alpha G protein alpha subunit. Subunit of G prot	99.63
PF00503	389	G-alpha: G-protein alpha subunit; InterPro: IPR001	99.39

>KOG0099|consensus

Probab=99.86  E-value=6e-22  Score=130.23  Aligned_cols=74  Identities=61%  Similarity=1.154  Sum_probs=70.2

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccCCCCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      |+.|.|.+++++++++..+++|+++....++.+|+|+.+.++.||+|.||+.||+|+|||||.|+|+||||+++
T Consensus        95 M~~l~p~v~l~~~~~~~~~dYIls~~~~~~~~~~~Ef~dHv~~lW~D~Gv~acyeRSnEyqLiDcAqYFLd~~~  168 (379)
T KOG0099|consen   95 MSNLVPPVELANPENQFRVDYILSVMNSPDFDYPPEFYDHVKTLWEDEGVRACYERSNEYQLIDCAQYFLDKID  168 (379)
T ss_pred             HhccCCCcccCCcccchhHHHHHhcCCCCcccCCHHHHHHHHHHhhhhhHHHHHhccCccchhhHHHHHHHhhh
Confidence            67888889999999999999999998888888999999999999999999999999999999999999999875

>KOG0085|consensus

Probab=99.80  E-value=1.8e-20  Score=121.92  Aligned_cols=72  Identities=28%  Similarity=0.565  Sum_probs=64.8

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccCCCCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      |++|  .|++..++|+.++..++......-..|...++.+|+.||.|||||+||+||+||||.|||+||++++|
T Consensus        94 MetL--~I~y~~e~nk~~A~~vrevd~ekVttfe~~yv~aik~LW~D~GIqeCYdRRREyqLsDSakYylsdld  165 (359)
T KOG0085|consen   94 METL--KIPYKREENKAHASLVREVDVEKVTTFEKRYVSAIKWLWRDPGIQECYDRRREYQLSDSAKYYLSDLD  165 (359)
T ss_pred             HHHh--ccccccccchhhhhHhhhcchHHhhhhhHHHHHHHHHHHhCcchHHHHHHHHHhhcchhhhHHhhhhh
Confidence            6789  99999999999999998765443346889999999999999999999999999999999999999875

>KOG0082|consensus

Probab=99.77  E-value=3.1e-19  Score=120.53  Aligned_cols=71  Identities=35%  Similarity=0.666  Sum_probs=61.7

Q ss_pred             CCCCCCCCCCCcccHHHHHHHhhhccCC-C-CCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          2 SQVNPPCTLEHPENQSRVDYIHNVASAH-D-FDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         2 ~~l~~~i~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      ..+  ++++.+|.++.++..++...... + .+++++++++|++||+||+||+||+||++|+|+|||+|||++|+
T Consensus        89 ~~~--~i~~~~~~~~~d~~~~~~~~~~~~~~~~~~~e~~~~i~~lW~d~~Iq~~~~r~~e~~l~Dsa~Yfl~~l~  161 (354)
T KOG0082|consen   89 ETL--GINLDDPERENDAQKLTLLADAAEELGVFSPELAEAIKELWKDPGIQACYERRREFQLNDSAKYFLENLD  161 (354)
T ss_pred             HHh--cCCCCChhhhhHHHHHHHhhhcccccccCCHHHHHHHHHHHcCHHHHHHHHcCCcCCCCccHHHHHHhHH
Confidence            456  89999998888888887554333 2 46999999999999999999999999999999999999999975

>cd00066 G-alpha G protein alpha subunit

Probab=99.66  E-value=1.1e-16  Score=106.77  Aligned_cols=71  Identities=37%  Similarity=0.711  Sum_probs=61.3

Q ss_pred             CCCCCCCCCCCcccHHHHHHHhhhccC-CCCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          2 SQVNPPCTLEHPENQSRVDYIHNVASA-HDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         2 ~~l~~~i~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      +.+  ++++.+++++..++.+...... ....+++++++.|.+||+|++||+||.||++|+|+||++|||++++
T Consensus        56 ~~~--~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~lW~d~~iq~~~~~r~e~~l~d~~~yf~~~~~  127 (317)
T cd00066          56 ERL--NIPFGDPENEKDAKKILSFAPELEEGELPPELAEAIKELWKDPGIQACYDRRNEFQLNDSAKYFLDNLD  127 (317)
T ss_pred             HHc--CCCCCChhhHHHHHHHHhccccccccCCCHHHHHHHHHHhCCHHHHHHHHhccccccccchHHHHHhHH
Confidence            456  7888989988888888766543 2346999999999999999999999999999999999999999874

The alpha subunit of G proteins contains the guanine nucleotide binding site. The heterotrimeric GNP-binding proteins are signal transducers that communicate signals from many hormones, neurotransmitters, chemokines, and autocrine and paracrine factors. Extracellular signals are received by receptors, which activate the G proteins, which in turn route the signals to several distinct intracellular signaling pathways. The alpha subunit of G proteins is a weak GTPase. In the resting state, heterotrimeric G proteins are associated at the cytosolic face of the plasma membrane and the alpha subunit binds to GDP. Upon activation by a receptor GDP is replaced with GTP, and the G-alpha/GTP complex dissociates from the beta and gamma subunits. This results in activation of downstream signaling pathways, such as cAMP synthesis by adenylyl cyclase, which is terminated when GTP is hydrolized and the heterotrimers reconstitute.

>smart00275 G_alpha G protein alpha subunit

Probab=99.63  E-value=3.3e-16  Score=105.59  Aligned_cols=71  Identities=30%  Similarity=0.578  Sum_probs=59.3

Q ss_pred             CCCCCCCCCCCcccHHHHHHHhhhcc---CCCCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          2 SQVNPPCTLEHPENQSRVDYIHNVAS---AHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         2 ~~l~~~i~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      +.+  +|+++++.+...+..+.....   ..+..+++++++.|+.||+||+||+||.||++|+|+||+.|||++++
T Consensus        77 ~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~LW~D~~iq~~~~~~~~~~l~ds~~yf~~~~~  150 (342)
T smart00275       77 EEL--NIPFEDPESILDIRIITEQFNKTDETENVLPKEIAKAIKALWKDEGIQECYRRRNEFQLNDSASYFLDNID  150 (342)
T ss_pred             HHc--CCCCCChhhHHHHHHHhccccccccccccCCHHHHHHHHHHHCCHHHHHHHHhccccccccchhHHHHHHH
Confidence            456  899998888777777766531   11235899999999999999999999999999999999999999864

Subunit of G proteins that contains the guanine nucleotide binding site

>PF00503 G-alpha: G-protein alpha subunit; InterPro: IPR001019 Guanine nucleotide binding proteins (G proteins) are membrane-associated, heterotrimeric proteins composed of three subunits: alpha (IPR001019 from INTERPRO), beta (IPR001632 from INTERPRO) and gamma (IPR001770 from INTERPRO) []

Probab=99.39  E-value=1.1e-13  Score=94.26  Aligned_cols=63  Identities=38%  Similarity=0.691  Sum_probs=49.7

Q ss_pred             CcccHHHHHHHhhhccCCCC----------CCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097         12 HPENQSRVDYIHNVASAHDF----------DYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus        12 ~~~~~~~~~~i~~~~~~~~~----------~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      ++.++..+..+.........          .+++++++.|..||+|++||+||.++++|+|+|++.|||++++
T Consensus       129 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~LW~D~~vq~~~~~~~~~~l~d~~~YFl~~l~  201 (389)
T PF00503_consen  129 NEENQEIAEKLKEILDPLDSSEFSLASDDNKFPEELAEDIRSLWKDPGVQECYERRNEFQLPDNAKYFLDNLD  201 (389)
T ss_dssp             STTHHHHHHHHHHHHCTTSTTCTC-----HCHHHHHHHHHHHHHHSHHHHHHHGGGGGST--TTHHHHHTTHH
T ss_pred             CHHHHHHHHHHHhhhccccccccccccccccCCHHHHHHHHHHHCChhHHHHHHhhhcccccccHHHHhhhhh
Confidence            56777777777655432221          3788999999999999999999999999999999999999864

G proteins and their receptors (GPCRs) form one of the most prevalent signalling systems in mammalian cells, regulating systems as diverse as sensory perception, cell growth and hormonal regulation []. At the cell surface, the binding of ligands such as hormones and neurotransmitters to a GPCR activates the receptor by causing a conformational change, which in turn activates the bound G protein on the intracellular-side of the membrane. The activated receptor promotes the exchange of bound GDP for GTP on the G protein alpha subunit. GTP binding changes the conformation of switch regions within the alpha subunit, which allows the bound trimeric G protein (inactive) to be released from the receptor, and to dissociate into active alpha subunit (GTP-bound) and beta/gamma dimer. The alpha subunit and the beta/gamma dimer go on to activate distinct downstream effectors, such as adenylyl cyclase, phosphodiesterases, phospholipase C, and ion channels. These effectors in turn regulate the intracellular concentrations of secondary messengers, such as cAMP, diacylglycerol, sodium or calcium cations, which ultimately lead to a physiological response, usually via the downstream regulation of gene transcription. The cycle is completed by the hydrolysis of alpha subunit-bound GTP to GDP, resulting in the re-association of the alpha and beta/gamma subunits and their binding to the receptor, which terminates the signal []. The length of the G protein signal is controlled by the duration of the GTP-bound alpha subunit, which can be regulated by RGS (regulator of G protein signalling) proteins (IPR000342 from INTERPRO) or by covalent modifications []. There are several isoforms of each subunit, many of which have splice variants, which together can make up hundreds of combinations of G proteins. The specific combination of subunits in heterotrimeric G proteins affects not only which receptor it can bind to, but also which downstream target is affected, providing the means to target specific physiological processes in response to specific external stimuli [, ]. G proteins carry lipid modifications on one or more of their subunits to target them to the plasma membrane and to contribute to protein interactions. This family consists of the G protein alpha subunit, which acts as a weak GTPase. G protein classes are defined based on the sequence and function of their alpha subunits, which in mammals fall into four main categories: G(S)alpha, G(Q)alpha, G(I)alpha and G(12)alpha; there are also fungal and plant classes of alpha subunits. The alpha subunit consists of two domains: a GTP-binding domain and a helical insertion domain (IPR011025 from INTERPRO). The GTP-binding domain is homologous to Ras-like small GTPases, and includes switch regions I and II, which change conformation during activation. The switch regions are loops of alpha-helices with conformations sensitive to guanine nucleotides. The helical insertion domain is inserted into the GTP-binding domain before switch region I and is unique to heterotrimeric G proteins. This helical insertion domain functions to sequester the guanine nucleotide at the interface with the GTP-binding domain and must be displaced to enable nucleotide dissociation.; GO: 0004871 signal transducer activity, 0019001 guanyl nucleotide binding, 0007186 G-protein coupled receptor protein signaling pathway; PDB: 3QI2_B 3QE0_A 2IK8_A 2OM2_A 2GTP_B 2XNS_B 3ONW_B 1KJY_A 2EBC_A 1Y3A_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	74
1cjk_C	402	Complex Of Gs-Alpha With The Catalytic Domains Of M		2e-22
1azs_C	402	Complex Of Gs-Alpha With The Catalytic Domains Of M		2e-22
1cul_C	380	Complex Of Gs-Alpha With The Catalytic Domains Of M		2e-22
3sn6_A	380	Crystal Structure Of The Beta2 Adrenergic Receptor-		3e-22
1cs4_C	394	Complex Of Gs-Alpha With The Catalytic Domains Of M		3e-22
1tnd_A	324	The 2.2 Angstroms Crystal Structure Of Transducin-A		2e-08
1fqj_A	325	Crystal Structure Of The Heterotrimeric Complex Of		2e-08
3v00_C	356	Studies Of A Constitutively Active G-Alpha Subunit		2e-08
1got_A	350	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		4e-08
2ode_A	350	Crystal Structure Of The Heterodimeric Complex Of H		7e-07
2ihb_A	323	Crystal Structure Of The Heterodimeric Complex Of H		8e-07
4g5r_A	330	Structure Of Lgn Gl4GALPHAI3 COMPLEX Length = 330		8e-07
4fid_A	340	Crystal Structure Of A Heterotrimeric G-Protein Sub		1e-06
1gil_A	353	Structure Of Active Conformations Of Gia1 And The M		3e-06
1kjy_A	325	Crystal Structure Of Human G[alpha]i1 Bound To The		3e-06
3ffb_A	360	Crystal Structure Of A Fast Activating G Protein Mu		3e-06
1gp2_A	353	G Protein Heterotrimer Gi_alpha_1 Beta_1 Gamma_2 Wi		3e-06
2zjy_A	356	Structure Of The K349p Mutant Of Gi Alpha 1 Subunit		3e-06
3qi2_A	328	A Galpha P-Loop Mutation Prevents Transition To The		3e-06
1y3a_A	329	Structure Of G-Alpha-I1 Bound To A Gdp-Selective Pe		3e-06
2xns_A	327	Crystal Structure Of Human G Alpha I1 Bound To A De		3e-06
3d7m_A	354	Crystal Structure Of The G Protein Fast-Exchange Do		3e-06
3ums_A	354	Crystal Structure Of The G202a Mutant Of Human G-Al		3e-06
2ik8_A	324	Crystal Structure Of The Heterodimeric Complex Of H		3e-06
2gtp_A	323	Crystal Structure Of The Heterodimeric Complex Of H		3e-06
1as0_A	353	Gtp-Gamma-S Bound G42v Gia1 Length = 353		3e-06
1svk_A	353	Structure Of The K180p Mutant Of Gi Alpha Subunit B		4e-06
1gg2_A	353	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		4e-06
4g5q_A	330	Structure Of Lgn Gl4GALPHAI1 COMPLEX Length = 330		4e-06
1bh2_A	315	A326s Mutant Of An Inhibitory Alpha Subunit Length		4e-06
2g83_A	313	Structure Of Activated G-alpha-i1 Bound To A Nucleo		4e-06
3qe0_A	325	A Galpha-I1 P-Loop Mutation Prevents Transition To		4e-06
3umr_A	354	Crystal Structure Of The G202d Mutant Of Human G-Al		4e-06
4g5o_A	330	Structure Of Lgn Gl4GALPHAI3(Q147L) COMPLEX Length		6e-06
3onw_A	328	Structure Of A G-Alpha-I1 Mutant With Enhanced Affi		2e-05
4ekc_A	347	Structure Of Human Regulator Of G Protein Signaling		4e-05
3c7k_A	333	Molecular Architecture Of Galphao And The Structura		6e-05
2bcj_Q	353	Crystal Structure Of G Protein-coupled Receptor Kin		7e-05
3ohm_A	327	Crystal Structure Of Activated G Alpha Q Bound To I		7e-05
3ah8_A	355	Structure Of Heterotrimeric G Protein Galpha-Q Beta		7e-05
4gnk_A	353	Crystal Structure Of Galphaq In Complex With Full-l		7e-05
2xtz_A	354	Crystal Structure Of The G Alpha Protein Atgpa1 Fro		8e-04

>pdb|1CJK|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With Adenosine 5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn Length = 402

Iteration: 1
 Score =  100 bits (248), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 110 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 169
Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  +
Sbjct: 170 QLIDCAQYFLDKI 182

>pdb|1AZS|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase Length = 402

Iteration: 1
 Score =  100 bits (248), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 110 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 169
Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  +
Sbjct: 170 QLIDCAQYFLDKI 182

>pdb|1CUL|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg Length = 380

Iteration: 1
 Score =  100 bits (248), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 96  MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 155
Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  +
Sbjct: 156 QLIDCAQYFLDKI 168

>pdb|3SN6|A Chain A, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 380

Iteration: 1
 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 96  MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 155
Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  +
Sbjct: 156 QLIDCAQYFLDKI 168

>pdb|1CS4|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And Mg Length = 394

Iteration: 1
 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 110 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 169
Query: 61  QLIDCAKYLVSLV 73
           QLIDCA+Y +  +
Sbjct: 170 QLIDCAQYFLDKI 182

>pdb|1TND|A Chain A, The 2.2 Angstroms Crystal Structure Of Transducin-Alpha Complexed With Gtp Gamma S Length = 324

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 22  IHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           +H   +  +   P E  DI + LWKD G+QACF+R++EYQL D A Y +S
Sbjct: 78  MHMADTIEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLS 127

>pdb|1FQJ|A Chain A, Crystal Structure Of The Heterotrimeric Complex Of The Rgs Domain Of Rgs9, The Gamma Subunit Of Phosphodiesterase And The GtI1 CHIMERA ALPHA SUBUNIT [(RGS9)-(Pdegamma)- (GtI1ALPHA)-(Gdp)-(Alf4-)-(Mg2+)] Length = 325

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 22  IHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           +H   +  +   P E  DI + LWKD G+QACF+R++EYQL D A Y +S
Sbjct: 79  MHMADTIEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLS 128

>pdb|3V00|C Chain C, Studies Of A Constitutively Active G-Alpha Subunit Provide Insights Into The Mechanism Of G Protein Activation. Length = 356

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 22  IHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           +H   +  +   P E  DI + LWKD G+QACF+R++EYQL D A Y +S
Sbjct: 110 MHMADTIEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLS 159

>pdb|1GOT|A Chain A, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 23  HNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           H   +  +   P E  DI + LWKD G+QACF+R++EYQL D A Y +S
Sbjct: 105 HXADTIEEGTXPKEXSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLS 153

>pdb|2ODE|A Chain A, Crystal Structure Of The Heterodimeric Complex Of Human Rgs8 And Activated Gi Alpha 3 Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 26  ASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
            SA +    PE   + + LW+D GVQACF RS EYQL D A Y ++
Sbjct: 111 GSAEEGVMTPELAGVIKRLWRDGGVQACFSRSREYQLNDSASYYLN 156

>pdb|2IHB|A Chain A, Crystal Structure Of The Heterodimeric Complex Of Human Rgs10 And Activated Gi Alpha 3 Length = 323

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 26  ASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
            SA +    PE   + + LW+D GVQACF RS EYQL D A Y ++
Sbjct: 81  GSAEEGVMTPELAGVIKRLWRDGGVQACFSRSREYQLNDSASYYLN 126

>pdb|4G5R|A Chain A, Structure Of Lgn Gl4GALPHAI3 COMPLEX Length = 330

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 26  ASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
            SA +    PE   + + LW+D GVQACF RS EYQL D A Y ++
Sbjct: 88  GSAEEGVMTPELAGVIKRLWRDGGVQACFSRSREYQLNDSASYYLN 133

>pdb|4FID|A Chain A, Crystal Structure Of A Heterotrimeric G-Protein Subunit From Entamoeba Histolytica, Ehg-Alpha-1 Length = 340

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 33  YPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK 74
           + PE     E LW D+G+QA +E S ++QL DCAKYL   VK
Sbjct: 86  FSPELVGDVEALWADEGIQATYEESAKFQLPDCAKYLFENVK 127

>pdb|1GIL|A Chain A, Structure Of Active Conformations Of Gia1 And The Mechanism Of Gtp Hydrolysis Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 121 ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 156

>pdb|1KJY|A Chain A, Crystal Structure Of Human G[alpha]i1 Bound To The Goloco Motif Of Rgs14 Length = 325

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 93  ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 128

>pdb|1GP2|A Chain A, G Protein Heterotrimer Gi_alpha_1 Beta_1 Gamma_2 With Gdp Bound Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 121 ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 156

>pdb|2ZJY|A Chain A, Structure Of The K349p Mutant Of Gi Alpha 1 Subunit Bound To Alf4 And Gdp Length = 356

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 124 ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 159

>pdb|3QI2|A Chain A, A Galpha P-Loop Mutation Prevents Transition To The Activated State: G42r Bound To Rgs14 Goloco Length = 328

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 96  ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 131

>pdb|1Y3A|A Chain A, Structure Of G-Alpha-I1 Bound To A Gdp-Selective Peptide Provides Insight Into Guanine Nucleotide Exchange Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 97  ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 132

>pdb|2XNS|A Chain A, Crystal Structure Of Human G Alpha I1 Bound To A Designed Helical Peptide Derived From The Goloco Motif Of Rgs14 Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 95  ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 130

>pdb|3D7M|A Chain A, Crystal Structure Of The G Protein Fast-Exchange Double Mutant I56cQ333C Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 122 ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 157

>pdb|3UMS|A Chain A, Crystal Structure Of The G202a Mutant Of Human G-Alpha-I1 Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 122 ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 157

>pdb|2IK8|A Chain A, Crystal Structure Of The Heterodimeric Complex Of Human Rgs16 And Activated Gi Alpha 1 Length = 324

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 92  ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 127

>pdb|2GTP|A Chain A, Crystal Structure Of The Heterodimeric Complex Of Human Rgs1 And Activated Gi Alpha 1 Length = 323

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 91  ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 126

>pdb|1AS0|A Chain A, Gtp-Gamma-S Bound G42v Gia1 Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 121 ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 156

>pdb|1SVK|A Chain A, Structure Of The K180p Mutant Of Gi Alpha Subunit Bound To Alf4 And Gdp Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 121 ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 156

>pdb|1GG2|A Chain A, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 121 ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 156

>pdb|4G5Q|A Chain A, Structure Of Lgn Gl4GALPHAI1 COMPLEX Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 98  ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 133

>pdb|1BH2|A Chain A, A326s Mutant Of An Inhibitory Alpha Subunit Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 91  ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 126

>pdb|2G83|A Chain A, Structure Of Activated G-alpha-i1 Bound To A Nucleotide- State-selective Peptide: Minimal Determinants For Recognizing The Active Form Of A G Protein Alpha Subunit Length = 313

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 90  ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 125

>pdb|3QE0|A Chain A, A Galpha-I1 P-Loop Mutation Prevents Transition To The Activated State Length = 325

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 93  ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 128

>pdb|3UMR|A Chain A, Crystal Structure Of The G202d Mutant Of Human G-Alpha-I1 Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EYQL D A Y ++
Sbjct: 122 ELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLN 157

>pdb|4G5O|A Chain A, Structure Of Lgn Gl4GALPHAI3(Q147L) COMPLEX Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 26  ASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
            SA +    PE   + + LW+D GVQACF RS EY L D A Y ++
Sbjct: 88  GSAEEGVMTPELAGVIKRLWRDGGVQACFSRSREYLLNDSASYYLN 133

>pdb|3ONW|A Chain A, Structure Of A G-Alpha-I1 Mutant With Enhanced Affinity For The Rgs14 Goloco Motif. Length = 328

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 36  EFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS 71
           E   + + LWKD GVQACF RS EY L D A Y ++
Sbjct: 96  ELAGVIKRLWKDSGVQACFNRSREYLLNDSAAYYLN 131

>pdb|4EKC|A Chain A, Structure Of Human Regulator Of G Protein Signaling 2 (rgs2) In Complex With Murine Galpha-q(r183c) Length = 347

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           M  +  P   EH +  +++    +V     FD P   Y   + LW D G+Q C++R  EY
Sbjct: 82  MDTLKIPYKYEHNKAHAQLVREVDVEKVSAFDVPD--YAAIKSLWNDPGIQECYDRRREY 139
Query: 61  QLIDCAKY 68
           QL D  KY
Sbjct: 140 QLSDSTKY 147

>pdb|3C7K|A Chain A, Molecular Architecture Of Galphao And The Structural Basis For Rgs16-Mediated Deactivation Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 33  YPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKY 68
           +  E       LW D G+Q CF RS EYQL D AKY
Sbjct: 99  FSAELLSAMMRLWGDSGIQECFNRSREYQLNDSAKY 134

>pdb|2BCJ|Q Chain Q, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 353

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           M  +  P   EH +  +++    +V     F+ P  + D  + LW D G+Q C++R  EY
Sbjct: 88  MDTLKIPYKYEHNKAHAQLVREVDVEKVSAFENP--YVDAIKSLWNDPGIQECYDRRREY 145
Query: 61  QLIDCAKY 68
           QL D  KY
Sbjct: 146 QLSDSTKY 153

>pdb|3OHM|A Chain A, Crystal Structure Of Activated G Alpha Q Bound To Its Effector Phospholipase C Beta 3 Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           M  +  P   EH +  +++    +V     F+ P  + D  + LW D G+Q C++R  EY
Sbjct: 62  MDTLKIPYKYEHNKAHAQLVREVDVEKVSAFENP--YVDAIKSLWNDPGIQECYDRRREY 119
Query: 61  QLIDCAKY 68
           QL D  KY
Sbjct: 120 QLSDSTKY 127

>pdb|3AH8|A Chain A, Structure Of Heterotrimeric G Protein Galpha-Q Beta Gamma In Complex With An Inhibitor Ym-254890 Length = 355

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           M  +  P   EH +  +++    +V     F+ P  + D  + LW D G+Q C++R  EY
Sbjct: 90  MDTLKIPYKYEHNKAHAQLVREVDVEKVSAFENP--YVDAIKSLWNDPGIQECYDRRREY 147
Query: 61  QLIDCAKY 68
           QL D  KY
Sbjct: 148 QLSDSTKY 155

>pdb|4GNK|A Chain A, Crystal Structure Of Galphaq In Complex With Full-length Human Plcbeta3 Length = 353

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           M  +  P   EH +  +++    +V     F+ P  + D  + LW D G+Q C++R  EY
Sbjct: 88  MDTLKIPYKYEHNKAHAQLVREVDVEKVSAFENP--YVDAIKSLWNDPGIQECYDRRREY 145
Query: 61  QLIDCAKY 68
           QL D  KY
Sbjct: 146 QLSDSTKY 153

>pdb|2XTZ|A Chain A, Crystal Structure Of The G Alpha Protein Atgpa1 From Arabidopsis Thaliana Length = 354

Iteration: 1
 Score = 38.5 bits (88), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 31  FDYPPEFYDIAE---ELWKDKGVQACFERSNEYQLIDCAKYLVSLVK 74
            DYP    DIAE    LWKD  +Q    R NE Q+ D  KYL+  +K
Sbjct: 97  LDYPRLTKDIAEGIETLWKDPAIQETXARGNELQVPDXTKYLMENLK 143

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	74
1azs_C	402	GS-alpha; complex (lyase/hydrolase), hydrolase, si	1e-13
1cip_A	353	Protein (guanine nucleotide-binding protein alpha-	8e-11
3ohm_A	327	Guanine nucleotide-binding protein G(Q) subunit A;	9e-10
1zcb_A	362	G alpha I/13; GTP-binding, lipoprotein, membrane,	2e-09
2xtz_A	354	Guanine nucleotide-binding protein alpha-1 subuni;	8e-06

>1azs_C GS-alpha; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Bos taurus} SCOP: a.66.1.1 c.37.1.8 PDB: 1azt_A* 3c14_C* 3c15_C* 3c16_C* 1cjt_C* 1cjk_C* 1cju_C* 1cjv_C* 1tl7_C* 1cs4_C* 1u0h_C* 2gvd_C* 2gvz_C* 3e8a_C* 3g82_C* 3maa_C* 1cul_C* 3sn6_A* Length = 402

 Score = 62.9 bits (152), Expect = 1e-13
 Identities = 44/69 (63%), Positives = 56/69 (81%)

Query: 1   MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
           MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 110 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 169

Query: 61  QLIDCAKYL 69
           QLIDCA+Y 
Sbjct: 170 QLIDCAQYF 178

>1cip_A Protein (guanine nucleotide-binding protein alpha-1 subunit); GTPase, hydrolase; HET: GNP; 1.50A {Rattus norvegicus} SCOP: a.66.1.1 c.37.1.8 PDB: 1agr_A* 1bof_A* 1gdd_A* 1gfi_A* 1gia_A* 1gp2_A* 3ffa_A* 3ffb_A* 1gg2_A* 1git_A* 1svs_A* 1svk_A* 2zjz_A* 2zjy_A* 3ums_A* 2pz2_A* 2pz3_A* 1as0_A* 1as2_A* 1as3_A* ... Length = 353

 Score = 54.7 bits (131), Expect = 8e-11
 Identities = 21/66 (31%), Positives = 28/66 (42%)

Query: 6   PPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDC 65
                +               +A +     E   + + LWKD GVQACF RS EYQL D 
Sbjct: 91  KIDFGDAARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQACFNRSREYQLNDS 150

Query: 66  AKYLVS 71
           A Y ++
Sbjct: 151 AAYYLN 156

>3ohm_A Guanine nucleotide-binding protein G(Q) subunit A; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Mus musculus} PDB: 2bcj_Q* 2rgn_A* 3ah8_A* Length = 327

 Score = 51.6 bits (123), Expect = 9e-10
 Identities = 17/60 (28%), Positives = 28/60 (46%)

Query: 10  LEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYL 69
            ++  N++    +  V       +   + D  + LW D G+Q C++R  EYQL D  KY 
Sbjct: 69  YKYEHNKAHAQLVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYY 128

>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A* Length = 362

 Score = 50.9 bits (121), Expect = 2e-09
 Identities = 11/50 (22%), Positives = 20/50 (40%)

Query: 20  DYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYL 69
                     +     ++      LW+D G+Q  ++R  E+QL +  KY 
Sbjct: 113 RAPMAAQGMVETRVFLQYLPAIRALWEDSGIQNAYDRRREFQLGESVKYF 162

>2xtz_A Guanine nucleotide-binding protein alpha-1 subuni; hydrolase, G-protein signaling, SELF-activation, RAS-like DO; HET: GSP; 2.34A {Arabidopsis thaliana} Length = 354

 Score = 40.5 bits (94), Expect = 8e-06
 Identities = 14/49 (28%), Positives = 18/49 (36%)

Query: 20  DYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKY 68
                           +  +  E LWKD  +Q    R NE Q+ DC KY
Sbjct: 89  KLSEIGGRLDYPRLTKDIAEGIETLWKDPAIQETCARGNELQVPDCTKY 137

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	74
3ohm_A	327	Guanine nucleotide-binding protein G(Q) subunit A;	99.82
1azs_C	402	GS-alpha; complex (lyase/hydrolase), hydrolase, si	99.77
4fid_A	340	G protein alpha subunit; RAS-like domain, all-heli	99.73
1zcb_A	362	G alpha I/13; GTP-binding, lipoprotein, membrane,	99.72
1cip_A	353	Protein (guanine nucleotide-binding protein alpha-	99.7
2xtz_A	354	Guanine nucleotide-binding protein alpha-1 subuni;	99.65

>3ohm_A Guanine nucleotide-binding protein G(Q) subunit A; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Mus musculus} PDB: 2bcj_Q* 2rgn_A* 3ah8_A*

Probab=99.82  E-value=3.2e-21  Score=128.26  Aligned_cols=72  Identities=25%  Similarity=0.548  Sum_probs=64.6

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccCCCCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      |++|  +|++++++++..++.++........+++++++++|+.||+|||||+||+||+||||+||++|||++++
T Consensus        62 ~~~l--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~lW~d~~iq~~~~r~~e~~l~d~~~yfl~~l~  133 (327)
T 3ohm_A           62 MDTL--KIPYKYEHNKAHAQLVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLD  133 (327)
T ss_dssp             HHHT--TCCCSSTHHHHHHHHHHTCCGGGCCCCCTTHHHHHHHHHTCHHHHHHHHGGGGSCCCTTHHHHHTTHH
T ss_pred             HHhc--CCCCCCchhHHHHHHHhcccccccccccHHHHHHHHHHHcCHHHHHHHHccccceecccHHHHHHHHH
Confidence            4568  89999999999999998776554567999999999999999999999999999999999999999863

>1azs_C GS-alpha; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Bos taurus} SCOP: a.66.1.1 c.37.1.8 PDB: 1azt_A* 3c14_C* 3c15_C* 3c16_C* 1cjt_C* 1cjk_C* 1cju_C* 1cjv_C* 1tl7_C* 1cs4_C* 1u0h_C* 2gvd_C* 2gvz_C* 3e8a_C* 3g82_C* 3maa_C* 1cul_C* 3sn6_A*

Probab=99.77  E-value=1.5e-19  Score=122.97  Aligned_cols=72  Identities=58%  Similarity=1.141  Sum_probs=62.5

Q ss_pred             CCCCCCCCCCcccHHHHHHHhhhccCCCCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          3 QVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         3 ~l~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      .|.|.|++++++++..++.++.+....+.+|+++++++|+.||+|+|||+||.||+||||+||++|||++++
T Consensus       112 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lW~d~~iq~~~~r~~e~~l~d~~~yfl~~~~  183 (402)
T 1azs_C          112 NLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKID  183 (402)
T ss_dssp             HSSSCCCCSSGGGHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHHCHHHHHHHTTGGGSCCCTTHHHHHTTHH
T ss_pred             hcCCCcccCCchhHHHHHHHHhhcccCCCCCCHHHHHHHHHHHcCHHHHHHHHhcccceeccchhhHHHHHH
Confidence            343358999999998889888776544457999999999999999999999999999999999999999863

>4fid_A G protein alpha subunit; RAS-like domain, all-helical domain, GTP binding, nucleotide signaling protein, transducer, lipoprotein; HET: MLY MSE GDP; 2.62A {Entamoeba histolytica}

Probab=99.73  E-value=3.9e-19  Score=118.77  Aligned_cols=68  Identities=31%  Similarity=0.551  Sum_probs=56.8

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccCCCCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      |++|  +|+++++.++..+   +... ....+++++++++|+.||+|+|||+||+||+||||+||++|||++|+
T Consensus        60 ~~~l--~i~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~i~~lW~d~~iq~~~~r~~e~~l~d~~~yfl~~l~  127 (340)
T 4fid_A           60 SAIL--NHPMKYQPKSKEF---TTED-PVTLPFSPELVGDVEALWADEGIQATYEESAKFQLPDCAKYLFENVK  127 (340)
T ss_dssp             HHHT--TCCCSCCCCSGGG---SCCS-CCCSSCCTTHHHHHHHHHHSHHHHHHHHTCTTSCCCTTHHHHHHTHH
T ss_pred             HHHh--CCCCCChhhHHHH---hhcc-cCCCCCCHHHHHHHHHHHcCHHHHHHHHhcccccccchhhhHHHHHH
Confidence            4567  8999998887655   3332 22356999999999999999999999999999999999999999863

>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A*

Probab=99.72  E-value=6.7e-19  Score=118.19  Aligned_cols=71  Identities=20%  Similarity=0.407  Sum_probs=60.0

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccCC--------C-CCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhc
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASAH--------D-FDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVS   71 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~~--------~-~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld   71 (74)
                      |+.|  +|+++++.++..++.++.+....        + ..| ++++++|+.||+|||||+||+||+||||+||++|||+
T Consensus        88 ~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~i~~LW~d~~iq~~~~r~~e~~l~ds~~yfl~  164 (362)
T 1zcb_A           88 REKL--HIPWGDNKNQLHGDKLMAFDTRAPMAAQGMVETRVF-LQYLPAIRALWEDSGIQNAYDRRREFQLGESVKYFLD  164 (362)
T ss_dssp             HHHT--TCCCSSGGGHHHHHHHHTSCSSSHHHHTTCCCHHHH-HHHHHHHHHHHHCHHHHHHHHTGGGSCCCTTHHHHHT
T ss_pred             HHHc--CCCCCCcccHHHHHHHHhhcccccccccccCcchhH-HHHHHHHHHHHCCHHHHHHHHhcchhhhcccHHHHHH
Confidence            3457  89999999998888887665421        1 246 8999999999999999999999999999999999999


Q ss_pred             cCC
Q psy12097         72 LVK   74 (74)
Q Consensus        72 ~l~   74 (74)
                      +++
T Consensus       165 ~~~  167 (362)
T 1zcb_A          165 NLD  167 (362)
T ss_dssp             THH
T ss_pred             HHH
Confidence            863

>1cip_A Protein (guanine nucleotide-binding protein alpha-1 subunit); GTPase, hydrolase; HET: GNP; 1.50A {Rattus norvegicus} SCOP: a.66.1.1 c.37.1.8 PDB: 1agr_A* 1bof_A* 1gdd_A* 1gfi_A* 1gia_A* 1gp2_A* 3ffa_A* 3ffb_A* 1gg2_A* 1git_A* 1svs_A* 1svk_A* 2zjz_A* 2zjy_A* 3ums_A* 2pz2_A* 2pz3_A* 1as0_A* 1as2_A* 1as3_A* ...

Probab=99.70  E-value=2.1e-18  Score=115.49  Aligned_cols=71  Identities=31%  Similarity=0.510  Sum_probs=61.6

Q ss_pred             CCCCCCCCCCCcccHHHHHHHhhhccCCC-CCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          2 SQVNPPCTLEHPENQSRVDYIHNVASAHD-FDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         2 ~~l~~~i~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      +.+  +|++++++++..++.++.+....+ ..++++++.+|+.||+|||||+||.||+||+|+|||.|||++++
T Consensus        88 ~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lw~d~~iq~~~~~~~e~~l~dsa~yfl~~~~  159 (353)
T 1cip_A           88 GRL--KIDFGDAARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLD  159 (353)
T ss_dssp             HHH--TCCCSSTTHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHCHHHHHHHTTGGGSCCCTTHHHHHTTHH
T ss_pred             HHh--CCCCCCcchHHHHHHHHhhccccccccCCHHHHHHHHHHHCCHHHHHHHHhhhhcccCccHHHHHHHHH
Confidence            456  899999999988888877654322 46999999999999999999999999999999999999999863

>2xtz_A Guanine nucleotide-binding protein alpha-1 subuni; hydrolase, G-protein signaling, SELF-activation, RAS-like DO; HET: GSP; 2.34A {Arabidopsis thaliana}

Probab=99.65  E-value=1.1e-17  Score=112.10  Aligned_cols=63  Identities=27%  Similarity=0.421  Sum_probs=50.5

Q ss_pred             CcccHHHHHHHhhhccCC-CCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097         12 HPENQSRVDYIHNVASAH-DFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus        12 ~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      ++.++..+..+....... ...++++++++|++||+|+|||+||+||+||||+||++|||++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~LW~D~~vq~~~~r~~e~~l~d~~~yfl~~~~  143 (354)
T 2xtz_A           80 SSESIAIGEKLSEIGGRLDYPRLTKDIAEGIETLWKDPAIQETCARGNELQVPDCTKYLMENLK  143 (354)
T ss_dssp             CHHHHHHHHHHHHHHHHCSSCCCCHHHHHHHHHHTTCHHHHHHHTTGGGTTCCTTHHHHHTSHH
T ss_pred             ChhHHHHHHHHHhcccccccccCCHHHHHHHHHHHCCHHHHHHHHhcchhhhhccHHHHHHHHH
Confidence            445555666665543222 246899999999999999999999999999999999999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	74
d1azta1	114	a.66.1.1 (A:88-201) Transducin (alpha subunit), in	4e-21
d2bcjq1	117	a.66.1.1 (Q:67-183) Transducin (alpha subunit), in	2e-14
d1cipa1	121	a.66.1.1 (A:61-181) Transducin (alpha subunit), in	3e-14
d1tada1	121	a.66.1.1 (A:57-177) Transducin (alpha subunit), in	2e-13
d1zcba1	126	a.66.1.1 (A:76-201) Transducin (alpha subunit), in	2e-11
d1zcaa1	122	a.66.1.1 (A:83-204) Transducin (alpha subunit), in	4e-10

>d1azta1 a.66.1.1 (A:88-201) Transducin (alpha subunit), insertion domain {Cow (Bos taurus) [TaxId: 9913]} Length = 114

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.6 bits (191), Expect = 4e-21
 Identities = 44/71 (61%), Positives = 57/71 (80%)

Query: 1  MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
          MS + PP  L +PENQ RVDYI +V +  DFD+PPEFY+ A+ LW+D+GV+AC+ERSNEY
Sbjct: 23 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEY 82

Query: 61 QLIDCAKYLVS 71
          QLIDCA+Y + 
Sbjct: 83 QLIDCAQYFLD 93

>d2bcjq1 a.66.1.1 (Q:67-183) Transducin (alpha subunit), insertion domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 117

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.3 bits (146), Expect = 2e-14
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 1  MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
          M  +  P   ++  N++    +  V       +   + D  + LW D G+Q C++R  EY
Sbjct: 28 MDTLKIPY--KYEHNKAHAQLVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREY 85

Query: 61 QLIDCAKYLVS 71
          QL D  KY ++
Sbjct: 86 QLSDSTKYYLN 96

>d1cipa1 a.66.1.1 (A:61-181) Transducin (alpha subunit), insertion domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 121

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.9 bits (145), Expect = 3e-14
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 1  MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
          M ++          + +R  ++   A+   F    E   + + LWKD GVQACF RS EY
Sbjct: 28 MGRLKIDFGDAARADDARQLFVLAGAAEEGF-MTAELAGVIKRLWKDSGVQACFNRSREY 86

Query: 61 QLIDCAKYLV 70
          QL D A Y +
Sbjct: 87 QLNDSAAYYL 96

>d1tada1 a.66.1.1 (A:57-177) Transducin (alpha subunit), insertion domain {Cow (Bos taurus) [TaxId: 9913]} Length = 121

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.0 bits (140), Expect = 2e-13
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 1  MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEY 60
          M+ +N        ++ +R   +H   +  +   P E  DI + LWKD G+QACF+R++EY
Sbjct: 28 MTTLNIQYGDSARQDDAR-KLMHMADTIEEGTMPKEMSDIIQRLWKDSGIQACFDRASEY 86

Query: 61 QLIDCAKYLVS 71
          QL D A Y +S
Sbjct: 87 QLNDSAGYYLS 97

>d1zcba1 a.66.1.1 (A:76-201) Transducin (alpha subunit), insertion domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 126

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.0 bits (127), Expect = 2e-11
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 8/67 (11%)

Query: 10  LEHPENQSRVDYIHNVAS--------AHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQ 61
               +NQ   D +    +          +     ++      LW+D G+Q  ++R  E+Q
Sbjct: 35  WGDNKNQLHGDKLMAFDTRAPMAAQGMVETRVFLQYLPAIRALWEDSGIQNAYDRRREFQ 94

Query: 62  LIDCAKY 68
           L +  KY
Sbjct: 95  LGESVKY 101

>d1zcaa1 a.66.1.1 (A:83-204) Transducin (alpha subunit), insertion domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 122

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.5 bits (118), Expect = 4e-10
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 10 LEHPENQSRVDYIHNVASAHDFDYPP----EFYDIAEELWKDKGVQACFERSNEYQLIDC 65
           +H EN+    ++    +       P     +      LW+D G++  F R +E+QL + 
Sbjct: 35 WQHSENEKHGMFLMAFENKAGLPVEPATFQLYVPALSALWRDSGIREAFSRRSEFQLGES 94

Query: 66 AKY 68
           KY
Sbjct: 95 VKY 97

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	74
d1azta1	114	Transducin (alpha subunit), insertion domain {Cow	99.94
d2bcjq1	117	Transducin (alpha subunit), insertion domain {Mous	99.92
d1tada1	121	Transducin (alpha subunit), insertion domain {Cow	99.91
d1zcaa1	122	Transducin (alpha subunit), insertion domain {Mous	99.89
d1cipa1	121	Transducin (alpha subunit), insertion domain {Rat	99.89
d1zcba1	126	Transducin (alpha subunit), insertion domain {Mous	99.89

>d1azta1 a.66.1.1 (A:88-201) Transducin (alpha subunit), insertion domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.94  E-value=1.3e-27  Score=137.88  Aligned_cols=74  Identities=59%  Similarity=1.140  Sum_probs=65.9

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccCCCCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      |+.|+++|++++++|+.+++.+++.....+..++++++++|++||+|+|||+||+||+||||+|||+|||++|+
T Consensus        23 m~~L~~~i~~~~~~n~~~~~~i~~~~~~~~~~~~~e~~~~i~~LW~D~giq~~~~r~~e~~L~Dsa~Yfl~~i~   96 (114)
T d1azta1          23 MSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKID   96 (114)
T ss_dssp             HTTSSSCCCCSSGGGHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHHSHHHHHHHHTGGGTTCCTTHHHHHTTHH
T ss_pred             HHHcCCCCCcCCHHHHHHHHHHHhcccccCcccCHHHHHHHHHHhCCHHHHHHHHhccccCCCCchHHHHHHHH
Confidence            56674457789999999999998876655567999999999999999999999999999999999999999874

>d2bcjq1 a.66.1.1 (Q:67-183) Transducin (alpha subunit), insertion domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=3.4e-26  Score=132.17  Aligned_cols=72  Identities=25%  Similarity=0.548  Sum_probs=65.2

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccCCCCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASAHDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      |+++  +|++++++++..+..++........+++++++++|++||+|+|||+||+||+||||+|||+|||++|+
T Consensus        28 ~~~l--~i~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFl~~l~   99 (117)
T d2bcjq1          28 MDTL--KIPYKYEHNKAHAQLVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLD   99 (117)
T ss_dssp             HHHH--TCCCSSTTHHHHHHHHHTSCSTTCCCCCHHHHHHHHHHHHSHHHHHHHHTTTSSCCCTTHHHHHTTHH
T ss_pred             HHHc--CCCCCChhhHHHHHHHHhcccccccccCHHHHHHHHHHHcCHHHHHHHHHhhhhccCcccHHHHHHHH
Confidence            3567  89999999999999998876655567999999999999999999999999999999999999999874

>d1tada1 a.66.1.1 (A:57-177) Transducin (alpha subunit), insertion domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=7.4e-26  Score=131.37  Aligned_cols=72  Identities=35%  Similarity=0.618  Sum_probs=63.7

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccC-CCCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASA-HDFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      |+.|  +|+++++.++..++.+...... ...+++++++++|++||+|+|||+||+||+||||+||++|||++|+
T Consensus        28 ~~~l--~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YF~~~l~  100 (121)
T d1tada1          28 MTTL--NIQYGDSARQDDARKLMHMADTIEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLE  100 (121)
T ss_dssp             HHHT--TCCCSSTTHHHHHHHHHHHHHHSCTTCCCHHHHHHHHHHHHCHHHHHHHHTGGGSCCCTTHHHHHTTHH
T ss_pred             HHHc--CCCCCCchHHHHHHHHHHhhccccCCCCCHHHHHHHHHHhCCHHHHHHHHhhhccccCcchHHHHHHHH
Confidence            4567  9999999999999988776433 3457999999999999999999999999999999999999999874

>d1zcaa1 a.66.1.1 (A:83-204) Transducin (alpha subunit), insertion domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.6e-24  Score=125.75  Aligned_cols=72  Identities=19%  Similarity=0.388  Sum_probs=62.1

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccCCC---C-CCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASAHD---F-DYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~~~---~-~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      |+.+  +|++++++|+..++.+..+.....   . .++++++++|++||+|+|||+||+||+||||+|||+|||++|+
T Consensus        28 m~~l--~i~~~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~LW~D~~Iq~~~~r~~ef~L~Dsa~YFl~~l~  103 (122)
T d1zcaa1          28 RDKL--GIPWQHSENEKHGMFLMAFENKAGLPVEPATFQLYVPALSALWRDSGIREAFSRRSEFQLGESVKYFLDNLD  103 (122)
T ss_dssp             HHHT--CCCCSSGGGHHHHHHHHTCCCTTCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHTGGGSCCCTHHHHHHHTHH
T ss_pred             HHHc--CCCCCChhhHHHHHHHHhcccccCCCCCccchHHHHHHHHHHHCCHHHHHHHHhccccccccchHHHHHHHH
Confidence            4568  899999999999999987754332   1 2557889999999999999999999999999999999999874

>d1cipa1 a.66.1.1 (A:61-181) Transducin (alpha subunit), insertion domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=6.3e-25  Score=127.31  Aligned_cols=72  Identities=32%  Similarity=0.522  Sum_probs=61.0

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccCC-CCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhccCC
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASAH-DFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSLVK   74 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~l~   74 (74)
                      |+++  +|+++++.++..+..+....... ...++++++++|++||+|+|||+||+||+||||+||++|||++|+
T Consensus        28 ~~~l--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~LW~D~~Iq~~~~r~~ef~L~Dsa~YFl~~l~  100 (121)
T d1cipa1          28 MGRL--KIDFGDAARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLD  100 (121)
T ss_dssp             HHHH--TCCCSSTTHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHCHHHHHHHTTGGGSCCCTTHHHHHTTHH
T ss_pred             HHHh--CCCCCChhHHHHHHHHHHhhccccCCCCCHHHHHHHHHHhCCHHHHHHHHhhhcccCCCChHHHHHHHH
Confidence            3457  89999999998887775543322 346899999999999999999999999999999999999999874

>d1zcba1 a.66.1.1 (A:76-201) Transducin (alpha subunit), insertion domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Transducin (alpha subunit), insertion domain
superfamily: Transducin (alpha subunit), insertion domain
family: Transducin (alpha subunit), insertion domain
domain: Transducin (alpha subunit), insertion domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.1e-24  Score=126.93  Aligned_cols=72  Identities=19%  Similarity=0.372  Sum_probs=62.3

Q ss_pred             CCCCCCCCCCCCcccHHHHHHHhhhccCC--------CCCCCHHHHHHHHHhhCCHHHHHHHHhhcccccccchHHhhcc
Q psy12097          1 MSQVNPPCTLEHPENQSRVDYIHNVASAH--------DFDYPPEFYDIAEELWKDKGVQACFERSNEYQLIDCAKYLVSL   72 (74)
Q Consensus         1 m~~l~~~i~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFld~   72 (74)
                      |+.|  +|+++++.|+..++.+..+....        +..++++++.+|++||+|+|||+||+||+||||+|||+|||++
T Consensus        28 ~~~l--~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~e~~~~i~~LW~D~~iq~~~~r~~ef~L~Dsa~YFl~~  105 (126)
T d1zcba1          28 REKL--HIPWGDNKNQLHGDKLMAFDTRAPMAAQGMVETRVFLQYLPAIRALWEDSGIQNAYDRRREFQLGESVKYFLDN  105 (126)
T ss_dssp             HHHT--TCCCSSGGGHHHHHHHHTSCSSSHHHHTTCCCHHHHHHHHHHHHHHHHCHHHHHHHHTGGGSCCCTTHHHHHTT
T ss_pred             HHHc--CCCCCCchhHHHHHHHHhcccccccccccccccccCHHHHHHHHHHhCCHHHHHHHHHhhhhcCCcchHHHHHH
Confidence            4568  89999999999999998764322        1247889999999999999999999999999999999999998


Q ss_pred             CC
Q psy12097         73 VK   74 (74)
Q Consensus        73 l~   74 (74)
                      |+
T Consensus       106 l~  107 (126)
T d1zcba1         106 LD  107 (126)
T ss_dssp             HH
T ss_pred             HH
Confidence            74