Psyllid ID: psy1213
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 472 | 2.2.26 [Sep-21-2011] | |||||||
| O46629 | 475 | Trifunctional enzyme subu | yes | N/A | 0.911 | 0.905 | 0.698 | 0.0 | |
| Q8HXX4 | 475 | Trifunctional enzyme subu | N/A | N/A | 0.911 | 0.905 | 0.700 | 0.0 | |
| Q5R1W7 | 475 | Trifunctional enzyme subu | yes | N/A | 0.911 | 0.905 | 0.696 | 0.0 | |
| P55084 | 474 | Trifunctional enzyme subu | yes | N/A | 0.911 | 0.907 | 0.696 | 0.0 | |
| Q60587 | 475 | Trifunctional enzyme subu | yes | N/A | 0.930 | 0.924 | 0.683 | 0.0 | |
| Q99JY0 | 475 | Trifunctional enzyme subu | yes | N/A | 0.911 | 0.905 | 0.698 | 0.0 | |
| P34255 | 448 | Uncharacterized protein B | yes | N/A | 0.936 | 0.986 | 0.582 | 1e-153 | |
| B1JGG1 | 436 | 3-ketoacyl-CoA thiolase O | yes | N/A | 0.828 | 0.896 | 0.443 | 9e-90 | |
| Q668V0 | 436 | 3-ketoacyl-CoA thiolase O | yes | N/A | 0.828 | 0.896 | 0.443 | 9e-90 | |
| A4TM83 | 436 | 3-ketoacyl-CoA thiolase O | yes | N/A | 0.828 | 0.896 | 0.443 | 9e-90 |
| >sp|O46629|ECHB_BOVIN Trifunctional enzyme subunit beta, mitochondrial OS=Bos taurus GN=HADHB PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/431 (69%), Positives = 369/431 (85%), Gaps = 1/431 (0%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ +NIV VDGVRTPFLLSGT Y ++M H+LAR +L G+L +T + KD++DYI+
Sbjct: 44 KKTLAKPNIRNIVVVDGVRTPFLLSGTSYKDLMPHDLARAALSGLLHRTSVPKDVVDYII 103
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVA 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACISSNQ +TT +GLIA+G DVVVA
Sbjct: 104 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVA 163
Query: 158 GGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
GGVE MSDIPIRHSRKMR ++L NKAKT A RL +++ R +F PELPAV+EFS+ ET
Sbjct: 164 GGVELMSDIPIRHSRKMRKMMLDLNKAKTLAQRLSIISKFRLNFLSPELPAVSEFSTSET 223
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF +SR+EQDEYALRSH+LA++AQ++G L+D++P +V G T+++DNG+R
Sbjct: 224 MGHSADRLAAAFAISREEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGRDTVTQDNGIR 283
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ +QMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM E KA +G KPKAYLRDF+Y
Sbjct: 284 PSSLDQMAKLKPAFIKPYGTVTAANSSFLTDGASAVLIMAEEKALAMGYKPKAYLRDFMY 343
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DID +E HEAF+GQILANLKAMDS+WFA+NY
Sbjct: 344 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDVFEFHEAFSGQILANLKAMDSDWFAQNY 403
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG+P L KFNNWGGSLS+GHPF ATG RL + AANRL +E GQ+GL+AACAAGG
Sbjct: 404 MGRKAKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGG 463
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 464 QGHAMIVEAYP 474
|
Bos taurus (taxid: 9913) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 6 |
| >sp|Q8HXX4|ECHB_MACFA Trifunctional enzyme subunit beta, mitochondrial OS=Macaca fascicularis GN=HADHB PE=2 SV=1 | Back alignment and function description |
|---|
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/431 (70%), Positives = 368/431 (85%), Gaps = 1/431 (0%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ +N+V VDGVRTPFLLSGT Y ++M H+LAR +L G+L +T + K+++DYI+
Sbjct: 44 KKTLAKPNIRNVVVVDGVRTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYII 103
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVA 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACIS+NQ +TTG+GLIA+G DV+VA
Sbjct: 104 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVA 163
Query: 158 GGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
GGVE MSDIPIRHSRKMR L+L NKAK+ RL L++ R +F PELPAVAEFS+ ET
Sbjct: 164 GGVELMSDIPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRLNFLAPELPAVAEFSTSET 223
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF VSR EQDEYALRSH+LA++AQ++G L+D++P +V G T++KDNG+R
Sbjct: 224 MGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVVPFRVPGKDTVTKDNGIR 283
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ EQMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM E KA +G KPKAYLRDF+Y
Sbjct: 284 PSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLRDFMY 343
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DIDA+E HEAF+GQILAN KAMDS+WFA+NY
Sbjct: 344 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAENY 403
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG+P L KFNNWGGSLS+GHPF ATG RL + AANRL +E GQ+GL+AACAAGG
Sbjct: 404 MGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGG 463
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 464 QGHAMIVEAYP 474
|
Macaca fascicularis (taxid: 9541) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q5R1W7|ECHB_PANTR Trifunctional enzyme subunit beta, mitochondrial OS=Pan troglodytes GN=HADHB PE=2 SV=1 | Back alignment and function description |
|---|
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/431 (69%), Positives = 368/431 (85%), Gaps = 1/431 (0%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ +N+V VDGVRTPFLLSGT Y ++M H+LAR +L G+L +T + K+++DYI+
Sbjct: 44 KKTLAKPNIRNVVVVDGVRTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYII 103
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVA 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACIS+NQ +TTG+GLIA+G DV+VA
Sbjct: 104 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVA 163
Query: 158 GGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
GGVE MSD+PIRHSRKMR L+L NKAK+ RL L++ R +F PELPAV+EFS+ ET
Sbjct: 164 GGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFNFLAPELPAVSEFSTSET 223
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF VSR EQDEYALRSH+LA++AQ++G L+D++P +V G T++KDNG+R
Sbjct: 224 MGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGKDTVTKDNGIR 283
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ EQMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM E KA +G KPKAYLRDF+Y
Sbjct: 284 PSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLRDFMY 343
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DIDA+E HEAF+GQILAN KAMDS+WFA+NY
Sbjct: 344 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAENY 403
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG+P L KFNNWGGSLS+GHPF ATG RL + AANRL +E GQ+GL+AACAAGG
Sbjct: 404 MGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGG 463
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 464 QGHAMIVEAYP 474
|
Pan troglodytes (taxid: 9598) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P55084|ECHB_HUMAN Trifunctional enzyme subunit beta, mitochondrial OS=Homo sapiens GN=HADHB PE=1 SV=3 | Back alignment and function description |
|---|
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/431 (69%), Positives = 368/431 (85%), Gaps = 1/431 (0%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ +N+V VDGVRTPFLLSGT Y ++M H+LAR +L G+L +T + K+++DYI+
Sbjct: 43 KKTLAKPNIRNVVVVDGVRTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYII 102
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVA 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACIS+NQ +TTG+GLIA+G DV+VA
Sbjct: 103 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVA 162
Query: 158 GGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
GGVE MSD+PIRHSRKMR L+L NKAK+ RL L++ R +F PELPAV+EFS+ ET
Sbjct: 163 GGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFNFLAPELPAVSEFSTSET 222
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF VSR EQDEYALRSH+LA++AQ++G L+D++P +V G T++KDNG+R
Sbjct: 223 MGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGKDTVTKDNGIR 282
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ EQMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM E KA +G KPKAYLRDF+Y
Sbjct: 283 PSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLRDFMY 342
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DIDA+E HEAF+GQILAN KAMDS+WFA+NY
Sbjct: 343 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAENY 402
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG+P L KFNNWGGSLS+GHPF ATG RL + AANRL +E GQ+GL+AACAAGG
Sbjct: 403 MGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGG 462
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 463 QGHAMIVEAYP 473
|
Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q60587|ECHB_RAT Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus GN=Hadhb PE=1 SV=1 | Back alignment and function description |
|---|
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/446 (68%), Positives = 369/446 (82%), Gaps = 7/446 (1%)
Query: 29 CTSHNVYSP------RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGI 82
C+S +P +K++ KNIV V+GVR PFLLSGT Y ++M H+LAR +L G+
Sbjct: 29 CSSQVQSAPAVQTKSKKTLAKPNLKNIVVVEGVRIPFLLSGTSYKDLMPHDLARAALSGL 88
Query: 83 LQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITT 142
L +T I KD++DYI++GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACISSNQ +TT
Sbjct: 89 LYRTNIPKDVVDYIIFGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTT 148
Query: 143 GIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFF 202
+GLIA+G DVVVAGGVE MSD+PIRHSR MR ++L NKAKT A RL LL R +F
Sbjct: 149 AVGLIASGQCDVVVAGGVELMSDVPIRHSRNMRKMMLDLNKAKTLAQRLSLLTKFRLNFL 208
Query: 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPI 262
PELPAVAEFS+ ETMGHSADRLAAAF VSR EQD+YALRSH+LA++AQ++G+L+DI+P
Sbjct: 209 SPELPAVAEFSTNETMGHSADRLAAAFAVSRMEQDKYALRSHSLAKKAQDEGHLSDIVPF 268
Query: 263 QV-GDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAK 321
+V G T+SKDNG+R S+ EQMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM+E +A
Sbjct: 269 KVPGKDTVSKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMSEDRAL 328
Query: 322 QLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQIL 381
+G KPKAYLRDF+YVSQDPKDQLLLGP YATP+VLE+AGL+++DIDA+E HEAF+GQIL
Sbjct: 329 AMGYKPKAYLRDFIYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQIL 388
Query: 382 ANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVR 441
AN KAMDS+WFA+NYMGR +KVG P L KFN WGGSLS+GHPF ATG RL + AANRL +
Sbjct: 389 ANFKAMDSDWFAQNYMGRKTKVGAPPLEKFNIWGGSLSLGHPFGATGCRLVMAAANRLRK 448
Query: 442 EDGQFGLIAACAAGGQGVGMIIERHP 467
+ GQ+ L+AACAAGGQG MI+E +P
Sbjct: 449 DGGQYALVAACAAGGQGHAMIVEAYP 474
|
Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q99JY0|ECHB_MOUSE Trifunctional enzyme subunit beta, mitochondrial OS=Mus musculus GN=Hadhb PE=1 SV=1 | Back alignment and function description |
|---|
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/431 (69%), Positives = 364/431 (84%), Gaps = 1/431 (0%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ KNIV V+GVR PFLLSGT Y ++M H+LAR +L G+L +T I KD++DYI+
Sbjct: 44 KKTLAKPNMKNIVVVEGVRIPFLLSGTSYKDLMPHDLARAALSGLLHRTNIPKDVVDYII 103
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVA 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACISSNQ +TT +GLIA+G DVVVA
Sbjct: 104 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVA 163
Query: 158 GGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
GGVE MSD+PIRHSR MR ++L NKAKT RL LL+ R +F PELPAVAEFS+ ET
Sbjct: 164 GGVELMSDVPIRHSRNMRKMMLDLNKAKTLGQRLSLLSKFRLNFLSPELPAVAEFSTNET 223
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF VSR EQDEYALRSH+LA++AQ++G+L+DI+P +V G T++KDNG+R
Sbjct: 224 MGHSADRLAAAFAVSRMEQDEYALRSHSLAKKAQDEGHLSDIVPFKVPGKDTVTKDNGIR 283
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ EQMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM+E +A +G KPKAYLRDF+Y
Sbjct: 284 PSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMSEDRALAMGYKPKAYLRDFIY 343
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DIDA+E HEAF+GQILAN KAMDS+WFA+NY
Sbjct: 344 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAQNY 403
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG P L KFN WGGSLS+GHPF ATG RL + AANRL ++ GQ+ L+AACAAGG
Sbjct: 404 MGRKTKVGSPPLEKFNIWGGSLSLGHPFGATGCRLVMAAANRLRKDGGQYALVAACAAGG 463
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 464 QGHAMIVEAYP 474
|
Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P34255|YKA3_CAEEL Uncharacterized protein B0303.3 OS=Caenorhabditis elegans GN=B0303.3 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 542 bits (1397), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/445 (58%), Positives = 337/445 (75%), Gaps = 3/445 (0%)
Query: 25 LKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQ 84
L+++ TS +V K NIV VD VRTPF++SGT + ++MA +L + ++ +++
Sbjct: 2 LRAVSTSFGTARAASAVAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVE 61
Query: 85 KTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGI 144
KT + + +D+I+ GTVIQE KTSNI REAAL AG DK PAHTVT+ACISSN +TTG+
Sbjct: 62 KTKLPYEQLDHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGM 121
Query: 145 GLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204
G++A G + ++AGGVE +SD+PIR++R R +L NKAK +LK+ I + P
Sbjct: 122 GMLATGNANAIIAGGVELLSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSP 181
Query: 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV 264
ELPAVAEFS+GETMGHS DRLAAAF VSR+EQDE+A+RSHTLA +A + G TD++P+ +
Sbjct: 182 ELPAVAEFSTGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTDVVPVFL 241
Query: 265 GDK---TISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAK 321
K TI +DNG+RVST E+++ LKPAFVKPHG+VTAAN+S+LTDGASA +IMTE A
Sbjct: 242 DGKKPKTIKEDNGIRVSTLEKLSSLKPAFVKPHGTVTAANASYLTDGASAALIMTEEYAL 301
Query: 322 QLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQIL 381
G KPKAYLRD++YV+QDPKDQLLL PAY P++L++AGL+L D+D +E+HEAFAGQ+L
Sbjct: 302 ANGYKPKAYLRDYLYVAQDPKDQLLLSPAYVIPKLLDKAGLTLKDVDVFEIHEAFAGQVL 361
Query: 382 ANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVR 441
ANL AMDS++F K M RS K G ++K N WGGSLSIGHPF ATGVRL H+A+RL
Sbjct: 362 ANLNAMDSDYFCKEQMKRSGKFGRVPMDKLNLWGGSLSIGHPFGATGVRLATHSAHRLKE 421
Query: 442 EDGQFGLIAACAAGGQGVGMIIERH 466
E GQ+ +IAACAAGG GVGM+IE +
Sbjct: 422 EKGQYAVIAACAAGGHGVGMLIEAY 446
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|B1JGG1|FADI_YERPY 3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fadI PE=3 SV=1 | Back alignment and function description |
|---|
Score = 331 bits (848), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 178/401 (44%), Positives = 259/401 (64%), Gaps = 10/401 (2%)
Query: 44 KTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ 103
+ G IV V+G+RTPF T Y + A +L + + +L ++GIS +LID +V+G V+Q
Sbjct: 10 RQGDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQ 69
Query: 104 EVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
+ NI RE L G S T A++V+ AC +S Q + I AG+ D+ +AGG +
Sbjct: 70 MPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSS 129
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
S +PI S+ + L+ ANKA++ + +LKL + +R +P PAVAE+S+G MG +A+
Sbjct: 130 SVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAE 189
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD------ILPIQVGDKTISKDNGVRV 277
++A + +SR++QD ALRSH LA +A ++G+L D I P + + I +DN +R
Sbjct: 190 QMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRK 246
Query: 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
ST Q AKL+PAF + HGSVTAANS+ LTDGA+A ++M+E+KAK LGL P YLR F +
Sbjct: 247 DSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAF 306
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
+ D +LLGP+YATP L+RAG++L+D+ ++HEAFA Q LANLK S+ FA+
Sbjct: 307 SAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREK 366
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437
+GRS +G D++KFN GGS++ GHPFAATG R+ N
Sbjct: 367 LGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLN 407
|
Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. Yersinia pseudotuberculosis serotype O:3 (strain YPIII) (taxid: 502800) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q668V0|FADI_YERPS 3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=fadI PE=3 SV=1 | Back alignment and function description |
|---|
Score = 331 bits (848), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 178/401 (44%), Positives = 259/401 (64%), Gaps = 10/401 (2%)
Query: 44 KTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ 103
+ G IV V+G+RTPF T Y + A +L + + +L ++GIS +LID +V+G V+Q
Sbjct: 10 RQGDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQ 69
Query: 104 EVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
+ NI RE L G S T A++V+ AC +S Q + I AG+ D+ +AGG +
Sbjct: 70 MPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSS 129
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
S +PI S+ + L+ ANKA++ + +LKL + +R +P PAVAE+S+G MG +A+
Sbjct: 130 SVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAE 189
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD------ILPIQVGDKTISKDNGVRV 277
++A + +SR++QD ALRSH LA +A ++G+L D I P + + I +DN +R
Sbjct: 190 QMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRK 246
Query: 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
ST Q AKL+PAF + HGSVTAANS+ LTDGA+A ++M+E+KAK LGL P YLR F +
Sbjct: 247 DSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAF 306
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
+ D +LLGP+YATP L+RAG++L+D+ ++HEAFA Q LANLK S+ FA+
Sbjct: 307 SAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREK 366
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437
+GRS +G D++KFN GGS++ GHPFAATG R+ N
Sbjct: 367 LGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLN 407
|
Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. Yersinia pseudotuberculosis (taxid: 633) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|A4TM83|FADI_YERPP 3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadI PE=3 SV=1 | Back alignment and function description |
|---|
Score = 331 bits (848), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 178/401 (44%), Positives = 259/401 (64%), Gaps = 10/401 (2%)
Query: 44 KTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ 103
+ G IV V+G+RTPF T Y + A +L + + +L ++GIS +LID +V+G V+Q
Sbjct: 10 RQGDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQ 69
Query: 104 EVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
+ NI RE L G S T A++V+ AC +S Q + I AG+ D+ +AGG +
Sbjct: 70 MPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESIIAGSVDIAIAGGADSS 129
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
S +PI S+ + L+ ANKA++ + +LKL + +R +P PAVAE+S+G MG +A+
Sbjct: 130 SVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLLPVAPAVAEYSTGLRMGDTAE 189
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD------ILPIQVGDKTISKDNGVRV 277
++A + +SR++QD ALRSH LA +A ++G+L D I P + + I +DN +R
Sbjct: 190 QMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRK 246
Query: 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
ST Q AKL+PAF + HGSVTAANS+ LTDGA+A ++M+E+KAK LGL P YLR F +
Sbjct: 247 DSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAF 306
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
+ D +LLGP+YATP L+RAG++L+D+ ++HEAFA Q LANLK S+ FA+
Sbjct: 307 SAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREK 366
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437
+GRS +G D++KFN GGS++ GHPFAATG R+ N
Sbjct: 367 LGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLN 407
|
Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. Yersinia pestis (strain Pestoides F) (taxid: 386656) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 472 | ||||||
| 193652756 | 469 | PREDICTED: trifunctional enzyme subunit | 0.987 | 0.993 | 0.773 | 0.0 | |
| 283993139 | 474 | fatty acid beta-oxidation complex subuni | 1.0 | 0.995 | 0.740 | 0.0 | |
| 157127973 | 469 | trifunctional enzyme beta subunit (tp-be | 0.989 | 0.995 | 0.751 | 0.0 | |
| 357625636 | 473 | fatty acid beta-oxidation complex subuni | 0.991 | 0.989 | 0.747 | 0.0 | |
| 170067602 | 467 | trifunctional enzyme beta subunit [Culex | 0.985 | 0.995 | 0.729 | 0.0 | |
| 91087131 | 474 | PREDICTED: similar to trifunctional enzy | 0.993 | 0.989 | 0.721 | 0.0 | |
| 195347235 | 469 | GM15500 [Drosophila sechellia] gi|195586 | 0.968 | 0.974 | 0.727 | 0.0 | |
| 195489349 | 469 | GE11519 [Drosophila yakuba] gi|194178800 | 0.959 | 0.965 | 0.734 | 0.0 | |
| 194885721 | 469 | GG19986 [Drosophila erecta] gi|190659669 | 0.961 | 0.968 | 0.730 | 0.0 | |
| 194754279 | 470 | GF12060 [Drosophila ananassae] gi|190620 | 0.970 | 0.974 | 0.721 | 0.0 |
| >gi|193652756|ref|XP_001943983.1| PREDICTED: trifunctional enzyme subunit beta, mitochondrial-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/473 (77%), Positives = 418/473 (88%), Gaps = 7/473 (1%)
Query: 1 MAQQLTKKIIKNALNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFL 60
MA L K I+K V + N+ L C S SPR VKDKTGKNIVFVDGVRTPFL
Sbjct: 1 MASNLLKNIVKLDTRVSVS-QNVCLPIRCLS--TASPR--VKDKTGKNIVFVDGVRTPFL 55
Query: 61 LSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGF 120
LSGTDYA++M H+LA+ +LIG+++KT + ++++DYIVYGTVIQEVKTSNIGREAAL+AGF
Sbjct: 56 LSGTDYASLMPHQLAKEALIGLMRKTNVPREVVDYIVYGTVIQEVKTSNIGREAALAAGF 115
Query: 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180
+ PAHTVTMACISSNQGITTGIGLIAAGAYDV+VAGGVEFMSD+PIRHSRKMRSLLLR
Sbjct: 116 PNSVPAHTVTMACISSNQGITTGIGLIAAGAYDVIVAGGVEFMSDVPIRHSRKMRSLLLR 175
Query: 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYA 240
ANKAKTP D+LKLL+T RPDF +PELPAVAEFSSGETMG SADRLAA+FKVSR+EQD+YA
Sbjct: 176 ANKAKTPLDKLKLLSTFRPDFLLPELPAVAEFSSGETMGFSADRLAASFKVSREEQDQYA 235
Query: 241 LRSHTLAQQAQEKGYLTDILPIQVGD--KTISKDNGVRVSTPEQMAKLKPAFVKPHGSVT 298
+RSHT+A++AQ+ GYLTDI+P ++ + K I KDNG+RVS +++AKLK AFVKPHG+VT
Sbjct: 236 VRSHTMAKEAQDNGYLTDIVPFRLPNSSKVIEKDNGIRVSPIDKLAKLKAAFVKPHGTVT 295
Query: 299 AANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358
AANSSFLTDGASAC+IMTE KAKQLGLKPK YLRDF YV+QDP DQLLLGP YATP+VLE
Sbjct: 296 AANSSFLTDGASACLIMTEEKAKQLGLKPKLYLRDFTYVAQDPIDQLLLGPTYATPKVLE 355
Query: 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSL 418
+AGLS++DID WEVHEAFAGQILANLKAMDS+WFA+ YM R SKVG+PDL+K+N WGGSL
Sbjct: 356 KAGLSVNDIDVWEVHEAFAGQILANLKAMDSDWFAQKYMNRKSKVGIPDLSKWNKWGGSL 415
Query: 419 SIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPDATA 471
SIGHPFAATGVRLTVH ANRLVREDGQFGLIAACAAGGQGVGMI+ERHPDATA
Sbjct: 416 SIGHPFAATGVRLTVHTANRLVREDGQFGLIAACAAGGQGVGMIVERHPDATA 468
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|283993139|gb|ADB57045.1| fatty acid beta-oxidation complex subunit beta [Heliothis virescens] | Back alignment and taxonomy information |
|---|
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/474 (74%), Positives = 416/474 (87%), Gaps = 2/474 (0%)
Query: 1 MAQQLTKKIIKNALNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFL 60
MA Q++K ++K + + + +++ + +KS+ D+TGKN+V VDGVRTPFL
Sbjct: 1 MASQISKSLLKVSHVSSTAKFDTARRALSVGAALQQKKKSLLDRTGKNVVLVDGVRTPFL 60
Query: 61 LSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGF 120
+S TDYA MM HELARHSL+G+LQKTGISKDLIDYIVYGTVIQEVKTSNIGREAAL+AGF
Sbjct: 61 VSFTDYAKMMPHELARHSLLGLLQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALAAGF 120
Query: 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180
SDKTPAHTVTMACISSN+ ITTG+G+IAAGAYD++VAGGVEFMSD+PIRHSRKMRSLLLR
Sbjct: 121 SDKTPAHTVTMACISSNRAITTGVGMIAAGAYDIIVAGGVEFMSDVPIRHSRKMRSLLLR 180
Query: 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYA 240
N+AKT A RL L+A+IRPDFF PELPAVAEFSSGETMGHSA RLAAAF SR+EQD+YA
Sbjct: 181 LNRAKTLAQRLSLIASIRPDFFAPELPAVAEFSSGETMGHSAVRLAAAFGASRQEQDDYA 240
Query: 241 LRSHTLAQQAQEKGYLTDILPIQVG--DKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVT 298
LRSH LA +AQ+KGY TD++P++V D + KDNG+RVSTPEQ+AKLKPAF+KPHG+VT
Sbjct: 241 LRSHKLAHEAQQKGYFTDLMPVKVDGKDGVVDKDNGIRVSTPEQLAKLKPAFIKPHGTVT 300
Query: 299 AANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358
AAN+SFLTDGASAC++M+EAKAK+LGLKPKAYLRDF YV+QDP DQLLLGPAY P++L+
Sbjct: 301 AANASFLTDGASACLVMSEAKAKELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILD 360
Query: 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSL 418
+AGL +SD+D WE+HEAFAGQILANLKAMDS+WFA+ Y+GR +KVG PDL+K+N WGGSL
Sbjct: 361 KAGLKMSDVDTWEIHEAFAGQILANLKAMDSDWFAQTYLGRQTKVGAPDLDKWNKWGGSL 420
Query: 419 SIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPDATAN 472
SIGHPFAATGVRL +H A+RLVREDGQFG+I+ACAAGGQGV MI+ERHPDAT N
Sbjct: 421 SIGHPFAATGVRLAMHTAHRLVREDGQFGVISACAAGGQGVAMILERHPDATCN 474
|
Source: Heliothis virescens Species: Heliothis virescens Genus: Heliothis Family: Noctuidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157127973|ref|XP_001661254.1| trifunctional enzyme beta subunit (tp-beta) [Aedes aegypti] gi|108882314|gb|EAT46539.1| AAEL002296-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/474 (75%), Positives = 420/474 (88%), Gaps = 7/474 (1%)
Query: 1 MAQQLTKKIIKNALNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFL 60
MA QLTK I +AL+ +T +L+SI T+ VY PRK + DKTGKN+V VDGVRTPFL
Sbjct: 1 MAYQLTK--IGSALS--GNLTKTALRSISTTGAVYEPRK-LPDKTGKNVVLVDGVRTPFL 55
Query: 61 LSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGF 120
+SGTDY+ +M HELARHSL+ +L+KT + K+L+DYIVYGTVIQEVKTSNI REAAL+AGF
Sbjct: 56 MSGTDYSKLMPHELARHSLLSLLRKTKLDKELVDYIVYGTVIQEVKTSNIAREAALAAGF 115
Query: 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180
SDKTPAHTVTMACISSNQ ITTG+GLIA G YDV+VAGGVEFMSD+PIRHSRKMR+L+L+
Sbjct: 116 SDKTPAHTVTMACISSNQAITTGMGLIATGTYDVIVAGGVEFMSDVPIRHSRKMRALMLK 175
Query: 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYA 240
ANKAKTP RL+LL++IRPDFFIPELPAVAEFSSGETMGHSADRLAA+F SR+EQD+YA
Sbjct: 176 ANKAKTPLQRLQLLSSIRPDFFIPELPAVAEFSSGETMGHSADRLAASFNASRQEQDDYA 235
Query: 241 LRSHTLAQQAQEKGYLTDILPIQVG--DKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVT 298
LRSHTLA++AQEKGY TD++P +V DKT+ KDNG+RVS+ E +AKL+PAFVKP+G+VT
Sbjct: 236 LRSHTLAKEAQEKGYFTDLVPFKVSGVDKTVEKDNGIRVSSKEALAKLRPAFVKPYGTVT 295
Query: 299 AANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358
AAN+SFLTDGASAC+IMTE KAK LGL+PKAYLRDF+YVSQDP DQLLLGPAY P++L+
Sbjct: 296 AANASFLTDGASACLIMTEEKAKALGLRPKAYLRDFLYVSQDPIDQLLLGPAYGIPKLLK 355
Query: 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSL 418
+AGL+L DID+WE+HEAFAGQI+ANLKA+DS++F KNY+G S KVG PDLNK+NNWGGSL
Sbjct: 356 KAGLTLKDIDSWEIHEAFAGQIIANLKALDSDYFCKNYLGLSEKVGTPDLNKWNNWGGSL 415
Query: 419 SIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPDATAN 472
SIGHPFAATGVRL +H ANRLVRE+GQ GL+AACAAGGQGV M++ERHPDA A
Sbjct: 416 SIGHPFAATGVRLCMHTANRLVRENGQLGLVAACAAGGQGVAMLLERHPDANAE 469
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357625636|gb|EHJ76018.1| fatty acid beta-oxidation complex subunit beta [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/471 (74%), Positives = 414/471 (87%), Gaps = 3/471 (0%)
Query: 1 MAQQLTKKIIKNALNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFL 60
MA Q+ K ++K A N + +++ + +KS+ D+TGKN+V VDGVRTPFL
Sbjct: 1 MASQVAKSLVKAARPNSTVKFNTACRALSVGAALQQ-KKSLPDRTGKNVVLVDGVRTPFL 59
Query: 61 LSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGF 120
+S TDY+ MM HELARHSL+G+LQKTGI K+++DYIVYGTVIQEVKTSNIGREAAL+AGF
Sbjct: 60 VSFTDYSKMMPHELARHSLLGLLQKTGIPKEVVDYIVYGTVIQEVKTSNIGREAALAAGF 119
Query: 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180
SD+TPAHTVTMACISSNQ ITTGIG+IAAGAYDV+VAGGVEFMSD+PIRHSRKMRSLLLR
Sbjct: 120 SDRTPAHTVTMACISSNQAITTGIGMIAAGAYDVIVAGGVEFMSDVPIRHSRKMRSLLLR 179
Query: 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYA 240
N+AKTPA RL LLA+IRPDFF PELPAVAEFSSGETMGHSADRLAAAF SR+EQD+YA
Sbjct: 180 LNRAKTPAQRLSLLASIRPDFFAPELPAVAEFSSGETMGHSADRLAAAFGASREEQDQYA 239
Query: 241 LRSHTLAQQAQEKGYLTDILPIQV--GDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVT 298
LRSH+LA QAQ+ GY TD++P++V D + KDNG+RVSTPEQ+AKL+PAF+KPHGSVT
Sbjct: 240 LRSHSLAHQAQQNGYFTDLIPVKVEGKDGVVDKDNGIRVSTPEQLAKLRPAFIKPHGSVT 299
Query: 299 AANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358
AAN+SFLTDGASAC++M+EAKAK+LGLKPKAYLRDF YV+QDP DQLLLGPAY P++L+
Sbjct: 300 AANASFLTDGASACLVMSEAKAKELGLKPKAYLRDFTYVAQDPVDQLLLGPAYGIPKILD 359
Query: 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSL 418
+AGL LSDID WE+HEAFAGQILANLKA+DS+WFA+ Y+GR SKVG PDL+K+N WGGSL
Sbjct: 360 QAGLKLSDIDTWEIHEAFAGQILANLKALDSDWFAQTYLGRQSKVGSPDLDKWNKWGGSL 419
Query: 419 SIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPDA 469
SIGHPFAATGVRL +H A+RLVREDGQFG+I+ACAAGGQGV M++ERHPDA
Sbjct: 420 SIGHPFAATGVRLAMHTAHRLVREDGQFGMISACAAGGQGVAMLLERHPDA 470
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170067602|ref|XP_001868546.1| trifunctional enzyme beta subunit [Culex quinquefasciatus] gi|167863710|gb|EDS27093.1| trifunctional enzyme beta subunit [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/474 (72%), Positives = 411/474 (86%), Gaps = 9/474 (1%)
Query: 1 MAQQLTKKIIKNALNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFL 60
MA QLTK L + +L+S+ T+ VY PRK + DKTG N+V VDGVRTPFL
Sbjct: 1 MAYQLTK------LGATGNLAKTALRSLSTTSAVYEPRK-LPDKTGHNVVLVDGVRTPFL 53
Query: 61 LSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGF 120
LSGT Y+ +M HELAR SL+ +LQKT + K++IDYI YGTVIQEVKTSNI REAALSAGF
Sbjct: 54 LSGTSYSKLMPHELARQSLLSLLQKTKLDKEVIDYITYGTVIQEVKTSNIAREAALSAGF 113
Query: 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180
S+KTPAHTVTMACISSN ITTG+GLIA G YD +VAGGVEFMSD+PIRHSRKMRSL+LR
Sbjct: 114 SNKTPAHTVTMACISSNAAITTGMGLIATGTYDTIVAGGVEFMSDVPIRHSRKMRSLMLR 173
Query: 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYA 240
ANKAKT RL+LL++IRPDFF+PELPAVAEFSSGETMGHSADRLAAAF SR+EQD+YA
Sbjct: 174 ANKAKTVGQRLQLLSSIRPDFFVPELPAVAEFSSGETMGHSADRLAAAFNASRQEQDDYA 233
Query: 241 LRSHTLAQQAQEKGYLTDILPIQVG--DKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVT 298
LRSHTLA++AQ+KGY TD++P +V DKT+ KDNG+RVS+ E +AKL+PAFVKP+G+VT
Sbjct: 234 LRSHTLAKEAQDKGYFTDLVPFKVAGVDKTVDKDNGIRVSSKEALAKLRPAFVKPYGTVT 293
Query: 299 AANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358
AAN+SFLTDGASAC+IMTEAKAK+LGL+PKAYLRDF+YVSQDP DQLLLGPAY P++L+
Sbjct: 294 AANASFLTDGASACLIMTEAKAKELGLRPKAYLRDFLYVSQDPIDQLLLGPAYGIPKLLK 353
Query: 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSL 418
+AGL+L DID+WE+HEAFAGQI+ANLKA+DS++F KNY+G S KVG PDL+K+NNWGGSL
Sbjct: 354 KAGLTLKDIDSWEIHEAFAGQIIANLKALDSDYFCKNYLGLSEKVGTPDLSKWNNWGGSL 413
Query: 419 SIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPDATAN 472
SIGHPFAATGVRL +H ANRLVRE+GQ G++AACAAGGQGV M++ERHP+A A+
Sbjct: 414 SIGHPFAATGVRLCMHTANRLVRENGQLGVVAACAAGGQGVAMLLERHPEANAD 467
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91087131|ref|XP_975238.1| PREDICTED: similar to trifunctional enzyme beta subunit (tp-beta) [Tribolium castaneum] gi|270009593|gb|EFA06041.1| hypothetical protein TcasGA2_TC008872 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/477 (72%), Positives = 411/477 (86%), Gaps = 8/477 (1%)
Query: 1 MAQQLTKKIIKN--ALNVPQT-ITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRT 57
MA + + I+K+ AL + Q N+ S+ T N +K+V D+TGKNIV VDGVRT
Sbjct: 1 MASYIARNIVKSPAALGLTQQQFGNLRAFSVGTQLN---SKKTVPDRTGKNIVLVDGVRT 57
Query: 58 PFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALS 117
PFL+SGTDY+ +M H+LA+ +L GIL+KTG+ K++IDY++YGTVIQEVKTSNI REAAL+
Sbjct: 58 PFLMSGTDYSKLMPHDLAKQALAGILKKTGVPKEMIDYVIYGTVIQEVKTSNIAREAALA 117
Query: 118 AGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSL 177
AG+SDKTPAHTVTMACISSN +TT IGLIA+G Y+++VAGGVEFMSDIPIRH+RKMRSL
Sbjct: 118 AGYSDKTPAHTVTMACISSNVAMTTAIGLIASGVYELIVAGGVEFMSDIPIRHNRKMRSL 177
Query: 178 LLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQD 237
+L+ANKAKT +L LLA+IRPD+F+PELPAVAEFSSGETMGHSADRLAAAF +R+EQD
Sbjct: 178 MLQANKAKTLQQKLGLLASIRPDYFVPELPAVAEFSSGETMGHSADRLAAAFGATRREQD 237
Query: 238 EYALRSHTLAQQAQEKGYLTDILPIQVG--DKTISKDNGVRVSTPEQMAKLKPAFVKPHG 295
E+ALRSHTLAQ A E G+ TD++P+++ DK I KDNG+RVSTPEQ+AKLKPAF+KPHG
Sbjct: 238 EFALRSHTLAQHAYESGHFTDLIPVKIPGIDKVIEKDNGIRVSTPEQLAKLKPAFIKPHG 297
Query: 296 SVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQ 355
+VTAAN+SFLTDGASA ++ TEAKAK LGLKPKAYLRDF+YVSQDP DQLLLGPAY TP
Sbjct: 298 TVTAANASFLTDGASAAIVTTEAKAKALGLKPKAYLRDFIYVSQDPIDQLLLGPAYGTPI 357
Query: 356 VLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWG 415
VLE+AGL++ DI WE HEAFAGQILAN KAMDS+WFA+ YM RSSK+G PD+NKFNNWG
Sbjct: 358 VLEKAGLTMKDIAVWEFHEAFAGQILANFKAMDSDWFAQTYMKRSSKIGAPDINKFNNWG 417
Query: 416 GSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPDATAN 472
GSLSIGHPFAATG+RL +H ANRLV+EDGQFG++AACAAGGQGV MI+ERHP+ATAN
Sbjct: 418 GSLSIGHPFAATGIRLAMHTANRLVKEDGQFGVVAACAAGGQGVAMILERHPEATAN 474
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195347235|ref|XP_002040159.1| GM15500 [Drosophila sechellia] gi|195586195|ref|XP_002082863.1| GD25003 [Drosophila simulans] gi|194135508|gb|EDW57024.1| GM15500 [Drosophila sechellia] gi|194194872|gb|EDX08448.1| GD25003 [Drosophila simulans] | Back alignment and taxonomy information |
|---|
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/463 (72%), Positives = 395/463 (85%), Gaps = 6/463 (1%)
Query: 12 NALNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMA 71
NA N + N+S K C + + K K G+NIV VDGVRTPFL SGT Y+ +M
Sbjct: 11 NAFN----LLNVSRKVQCRTLSAAVANPQPKQKNGQNIVLVDGVRTPFLTSGTTYSKLMP 66
Query: 72 HELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM 131
HELARHSL+ +LQK + K+LIDYIVYG+VIQEVKTSNI REAAL+AGFS+KTPAHTVTM
Sbjct: 67 HELARHSLLSLLQKNRLDKELIDYIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTM 126
Query: 132 ACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRL 191
ACISSN ITTG+GLIA YDV+VAGGVEFMSD+PIRHSRKMRSLLL+ANKAKT RL
Sbjct: 127 ACISSNAAITTGMGLIATNTYDVIVAGGVEFMSDVPIRHSRKMRSLLLKANKAKTLGQRL 186
Query: 192 KLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQ 251
LL+T RPDF PELPAVAEFSSGETMGHSADRLA+AF VSR EQDEYALRSHTLA++AQ
Sbjct: 187 ALLSTFRPDFLAPELPAVAEFSSGETMGHSADRLASAFNVSRSEQDEYALRSHTLAKEAQ 246
Query: 252 EKGYLTDILPIQVG--DKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGA 309
EKGY TD++P +V D+ + KDNG+RVS+PE +AKL+PAFVKP+G+VTAAN+SFLTDGA
Sbjct: 247 EKGYFTDLVPFKVSGVDQIVDKDNGIRVSSPESLAKLRPAFVKPYGTVTAANASFLTDGA 306
Query: 310 SACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDA 369
SAC+IMTE KAKQLGLKPKAYLRDF+YVSQDP +QLLLGPAY P++L++AGL+L DID+
Sbjct: 307 SACIIMTEEKAKQLGLKPKAYLRDFLYVSQDPVNQLLLGPAYGIPKLLKKAGLTLKDIDS 366
Query: 370 WEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429
WE+HEAFAGQI+ANLKA+DS+WF K Y+G + KVG PDL+K+NNWGGSLSIGHPFAATGV
Sbjct: 367 WEIHEAFAGQIVANLKALDSDWFCKTYLGLNEKVGTPDLSKWNNWGGSLSIGHPFAATGV 426
Query: 430 RLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPDATAN 472
RL +H ANRLVREDG+ G++AACAAGGQGV M+IER+P ATA+
Sbjct: 427 RLCMHTANRLVREDGKLGVVAACAAGGQGVAMLIERYPGATAD 469
|
Source: Drosophila sechellia Species: Drosophila sechellia Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195489349|ref|XP_002092699.1| GE11519 [Drosophila yakuba] gi|194178800|gb|EDW92411.1| GE11519 [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/455 (73%), Positives = 392/455 (86%), Gaps = 2/455 (0%)
Query: 20 ITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSL 79
+ N++ K C + + K K G+NIV VDGVRTPFL SGT Y+ +M HELARHSL
Sbjct: 15 LLNVTRKVQCRTLSAAVANPQPKQKNGQNIVLVDGVRTPFLTSGTTYSKLMPHELARHSL 74
Query: 80 IGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQG 139
+ +LQK + K+LIDYIVYG+VIQEVKTSNI REAAL+AGFS+KTPAHTVTMACISSN
Sbjct: 75 LSLLQKNRLDKELIDYIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTMACISSNAA 134
Query: 140 ITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199
ITTG+GLIA YDV+VAGGVEFMSD+PIRHSRKMRSLLL+ANKAKT RL LL+T RP
Sbjct: 135 ITTGMGLIATNTYDVIVAGGVEFMSDVPIRHSRKMRSLLLKANKAKTLGQRLSLLSTFRP 194
Query: 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDI 259
DF PELPAVAEFSSGETMGHSADRLA+AF VSR EQDEYALRSHTLA++AQEKGY TD+
Sbjct: 195 DFLAPELPAVAEFSSGETMGHSADRLASAFNVSRSEQDEYALRSHTLAKEAQEKGYFTDL 254
Query: 260 LPIQVG--DKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTE 317
+P +V D+ + KDNG+RVS+PE +AKL+PAFVKP+G+VTAAN+SFLTDGASAC+IMTE
Sbjct: 255 VPFKVSGVDQIVDKDNGIRVSSPESLAKLRPAFVKPYGTVTAANASFLTDGASACIIMTE 314
Query: 318 AKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFA 377
KAKQLGLKPKAYLRDF+YVSQDP +QLLLGPAY P++L++AGL+L DID+WE+HEAFA
Sbjct: 315 EKAKQLGLKPKAYLRDFLYVSQDPVNQLLLGPAYGIPKLLKKAGLTLKDIDSWEIHEAFA 374
Query: 378 GQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437
GQI+ANLKA+DS+WF K Y+G S KVG PDL+K+NNWGGSLSIGHPFAATGVRL +H AN
Sbjct: 375 GQIVANLKALDSDWFCKTYLGLSEKVGTPDLSKWNNWGGSLSIGHPFAATGVRLCMHTAN 434
Query: 438 RLVREDGQFGLIAACAAGGQGVGMIIERHPDATAN 472
RLVREDG+ G++AACAAGGQGV M+IER+P ATA+
Sbjct: 435 RLVREDGKLGVVAACAAGGQGVAMLIERYPGATAD 469
|
Source: Drosophila yakuba Species: Drosophila yakuba Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194885721|ref|XP_001976482.1| GG19986 [Drosophila erecta] gi|190659669|gb|EDV56882.1| GG19986 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/463 (73%), Positives = 397/463 (85%), Gaps = 9/463 (1%)
Query: 12 NALNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMA 71
N LNV + + +L S V SP+ K K G+NIV VDGVRTPFL SGT Y+ +M
Sbjct: 14 NLLNVSRKVQCRTL-----SAAVASPQP--KQKNGQNIVLVDGVRTPFLTSGTTYSKLMP 66
Query: 72 HELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM 131
HELARHSL+ +LQK + K+LIDYIVYG+VIQEVKTSNI REAAL+AGFS+KTPAHTVTM
Sbjct: 67 HELARHSLLSLLQKNRLDKELIDYIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTM 126
Query: 132 ACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRL 191
ACISSN ITTG+GLIA YDV+VAGGVEFMSD+PIRHSRKMRSLLL+ANKAKT RL
Sbjct: 127 ACISSNAAITTGMGLIATNTYDVIVAGGVEFMSDVPIRHSRKMRSLLLKANKAKTLGQRL 186
Query: 192 KLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQ 251
LL+T RPDF PELPAVAEFSSGETMGHSADRLA+AF VSR EQDEYALRSHTLA++AQ
Sbjct: 187 ALLSTFRPDFLAPELPAVAEFSSGETMGHSADRLASAFNVSRSEQDEYALRSHTLAKEAQ 246
Query: 252 EKGYLTDILPIQVG--DKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGA 309
EKGY TD++P +V D+ + KDNG+RVS+PE +AKL+PAFVKP+G+VTAAN+SFLTDGA
Sbjct: 247 EKGYFTDLVPFKVSGVDQIVDKDNGIRVSSPESLAKLRPAFVKPYGTVTAANASFLTDGA 306
Query: 310 SACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDA 369
SAC+IMTE KAKQLGLKPKAYLRDF+YVSQDP +QLLLGPAY P++L+++GL+L DID+
Sbjct: 307 SACIIMTEEKAKQLGLKPKAYLRDFLYVSQDPVNQLLLGPAYGIPKLLKKSGLTLKDIDS 366
Query: 370 WEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429
WE+HEAFAGQI+ANLKA+DS+WF K Y+G + KVG PDL+K+NNWGGSLSIGHPFAATGV
Sbjct: 367 WEIHEAFAGQIVANLKALDSDWFCKTYLGLNEKVGAPDLSKWNNWGGSLSIGHPFAATGV 426
Query: 430 RLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPDATAN 472
RL +H ANRLVREDG+ G++AACAAGGQGV M+IER+P ATA+
Sbjct: 427 RLCMHTANRLVREDGKLGVVAACAAGGQGVAMLIERYPGATAD 469
|
Source: Drosophila erecta Species: Drosophila erecta Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194754279|ref|XP_001959423.1| GF12060 [Drosophila ananassae] gi|190620721|gb|EDV36245.1| GF12060 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/463 (72%), Positives = 395/463 (85%), Gaps = 5/463 (1%)
Query: 12 NALNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMA 71
NA N+ N+ +S+ + P++ + G+NIV VDGVRTPFL SGT Y+ +M
Sbjct: 11 NAFNLLNVSRNVQCRSLSAAVAAPQPKQ---QRNGQNIVLVDGVRTPFLTSGTTYSKLMP 67
Query: 72 HELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM 131
HELARHSL+ +LQK + K+LIDYIVYGTVIQEVKTSNI REAAL+AGFSDKTPAHTVTM
Sbjct: 68 HELARHSLLSLLQKNRLDKELIDYIVYGTVIQEVKTSNIAREAALAAGFSDKTPAHTVTM 127
Query: 132 ACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRL 191
ACISSN ITTG+GLIA YDV+VAGGVEFMSD+PIRHSRKMRSL+L+ANKAKT RL
Sbjct: 128 ACISSNAAITTGMGLIATNTYDVIVAGGVEFMSDVPIRHSRKMRSLMLKANKAKTLGQRL 187
Query: 192 KLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQ 251
LL+T RP F PELPAVAEFSSGETMGHSADRLA+AF VSR EQDEYALRSHTLA++AQ
Sbjct: 188 SLLSTFRPGFLAPELPAVAEFSSGETMGHSADRLASAFNVSRAEQDEYALRSHTLAKEAQ 247
Query: 252 EKGYLTDILPIQVG--DKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGA 309
+KGY TD++P +V D+ + KDNG+RVS+PE +AKLKPAFVKP+G+VTAAN+SFLTDGA
Sbjct: 248 QKGYFTDLVPFKVSGVDQVVDKDNGIRVSSPESLAKLKPAFVKPYGTVTAANASFLTDGA 307
Query: 310 SACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDA 369
SAC+IMTE KAKQLGLKPKAYLRDF+YVSQDP +QLLLGPAY P++L++AGL+L DID+
Sbjct: 308 SACLIMTEEKAKQLGLKPKAYLRDFLYVSQDPVNQLLLGPAYGIPKLLKKAGLTLKDIDS 367
Query: 370 WEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429
WE+HEAFAGQI+ANLKA+DS+WF K YMG + KVG PDL+K+NNWGGSLSIGHPFAATGV
Sbjct: 368 WEIHEAFAGQIVANLKALDSDWFCKTYMGLNEKVGTPDLSKWNNWGGSLSIGHPFAATGV 427
Query: 430 RLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPDATAN 472
RL +H ANRLVREDG+ G++AACAAGGQGV M++ER+P ATA+
Sbjct: 428 RLCMHTANRLVREDGKLGVVAACAAGGQGVAMLLERYPGATAD 470
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 472 | ||||||
| FB|FBgn0025352 | 469 | Thiolase "Thiolase" [Drosophil | 0.968 | 0.974 | 0.686 | 2.2e-169 | |
| UNIPROTKB|E1BTT4 | 474 | HADHB "Uncharacterized protein | 0.980 | 0.976 | 0.634 | 2.7e-155 | |
| UNIPROTKB|O46629 | 475 | HADHB "Trifunctional enzyme su | 0.911 | 0.905 | 0.663 | 3.1e-154 | |
| ZFIN|ZDB-GENE-030131-8550 | 471 | hadhb "hydroxyacyl-Coenzyme A | 0.987 | 0.989 | 0.641 | 3.1e-154 | |
| UNIPROTKB|Q8HXX4 | 475 | HADHB "Trifunctional enzyme su | 0.911 | 0.905 | 0.665 | 4e-154 | |
| UNIPROTKB|F1SDN2 | 475 | HADHB "Uncharacterized protein | 0.911 | 0.905 | 0.668 | 8.2e-154 | |
| UNIPROTKB|B4E2W0 | 452 | HADHB "cDNA FLJ56214, highly s | 0.911 | 0.951 | 0.661 | 1.3e-153 | |
| UNIPROTKB|P55084 | 474 | HADHB "Trifunctional enzyme su | 0.911 | 0.907 | 0.661 | 1.3e-153 | |
| UNIPROTKB|Q5R1W7 | 475 | HADHB "Trifunctional enzyme su | 0.911 | 0.905 | 0.661 | 1.3e-153 | |
| UNIPROTKB|J9NZC6 | 478 | HADHB "Uncharacterized protein | 0.968 | 0.956 | 0.634 | 9.5e-153 |
| FB|FBgn0025352 Thiolase "Thiolase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1647 (584.8 bits), Expect = 2.2e-169, P = 2.2e-169
Identities = 318/463 (68%), Positives = 374/463 (80%)
Query: 12 NALNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMA 71
NA N + N++ K C + + K K +NIV VDGVRTPFL SGT Y+ +M
Sbjct: 11 NAFN----LLNVARKVQCRALSAAVANPQPKQKNSQNIVLVDGVRTPFLTSGTTYSKLMP 66
Query: 72 HELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM 131
HELARHSL+ +LQK + K+LIDYIVYG+VIQEVKTSNI REAAL+AGFS+KTPAHTVTM
Sbjct: 67 HELARHSLLSLLQKKRLDKELIDYIVYGSVIQEVKTSNIAREAALAAGFSNKTPAHTVTM 126
Query: 132 ACISSNQXXXXXXXXXXXXXXXXXXXXXXEFMSDIPIRHSRKMRSLLLRANKAKTPADRL 191
ACISSN EFMSD+PIRHSRKMRSLLL+ANKAKT RL
Sbjct: 127 ACISSNAAITTGMGLIATNTYDVIVAGGVEFMSDVPIRHSRKMRSLLLKANKAKTLGQRL 186
Query: 192 KLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQ 251
LL+T RPDF PELPAVAEFSSGETMGHSADRLA+AF VSR EQDEYALRSHTLA++AQ
Sbjct: 187 ALLSTFRPDFLAPELPAVAEFSSGETMGHSADRLASAFNVSRSEQDEYALRSHTLAKEAQ 246
Query: 252 EKGYLTDILPIQVG--DKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGA 309
EKGY TD++P +V D+ + KDNG+RVS+PE +AKL+PAFVKP G VTAAN+SFLTDGA
Sbjct: 247 EKGYFTDLVPFKVSGVDQIVDKDNGIRVSSPESLAKLRPAFVKPDGIVTAANASFLTDGA 306
Query: 310 SACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDA 369
SAC+IMTE KAKQLGLKPKAYLRDF++VSQDP +QLLLGPAY P++L++AGL+L DID+
Sbjct: 307 SACIIMTEEKAKQLGLKPKAYLRDFLFVSQDPVNQLLLGPAYGIPKLLKKAGLTLKDIDS 366
Query: 370 WEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429
WE+HEAFAGQI+ANLKA+DS+WF K Y+G + KVG PDL+K+NNWGGSLSIGHPFAATGV
Sbjct: 367 WEIHEAFAGQIVANLKALDSDWFCKTYLGLNEKVGTPDLSKWNNWGGSLSIGHPFAATGV 426
Query: 430 RLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPDATAN 472
RL +H ANRLVREDG+ G++AACAAGGQGV M+IER+P ATA+
Sbjct: 427 RLCMHTANRLVREDGKLGVVAACAAGGQGVAMLIERYPGATAD 469
|
|
| UNIPROTKB|E1BTT4 HADHB "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1514 (538.0 bits), Expect = 2.7e-155, P = 2.7e-155
Identities = 300/473 (63%), Positives = 365/473 (77%)
Query: 5 LTKKIIKNALNVPQT---ITNMSLKSICTSHNVYSPR---KSVKD--KTG-KNIVFVDGV 55
+T + N+P + + +S+ S + +P KS K K+G KNIV V+GV
Sbjct: 1 MTSMLTHTIRNLPASSAWAVRVFARSLSCSSQLQAPAVQPKSKKTLAKSGVKNIVVVEGV 60
Query: 56 RTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAA 115
R PFL SGT YA++M H+LAR +L G+L +T + +D++DYIVYGTVIQEVKTSN+ REAA
Sbjct: 61 RIPFLQSGTSYADLMPHDLARAALQGLLNRTSVPRDVVDYIVYGTVIQEVKTSNVAREAA 120
Query: 116 LSAGFSDKTPAHTVTMACISSNQXXXXXXXXXXXXXXXXXXXXXXEFMSDIPIRHSRKMR 175
L AGFSDKTPAHTVTMACISSNQ E MSD+PIRHSRKMR
Sbjct: 121 LGAGFSDKTPAHTVTMACISSNQAMTTGIGLIAAGQCDVVVAGGVELMSDVPIRHSRKMR 180
Query: 176 SLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKE 235
LL N+AKT +L L++ IRP++F PELPAVAEFS+ ETMGHSADRLAAAF +SR E
Sbjct: 181 KTLLTLNRAKTLGQKLALISKIRPNYFAPELPAVAEFSTSETMGHSADRLAAAFAISRVE 240
Query: 236 QDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVRVSTPEQMAKLKPAFVKPH 294
QDEYALRSHTLA++AQ++G L D++P +V G T++KDNG+R S+ EQM+KLKPAFVKP+
Sbjct: 241 QDEYALRSHTLAKKAQDEGLLLDVVPFKVPGKDTVTKDNGIRPSSLEQMSKLKPAFVKPY 300
Query: 295 GSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATP 354
G+VTAANSSFLTDGASA ++M+E KA LG KPKAYLRDFVYVSQDPKDQLLLGP YATP
Sbjct: 301 GTVTAANSSFLTDGASAMLLMSEEKALALGYKPKAYLRDFVYVSQDPKDQLLLGPTYATP 360
Query: 355 QVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW 414
+VLE+AGL+++DID +E HEAFAGQILAN+KAMDS+WFA+NYMGR SKVG P L KFN W
Sbjct: 361 KVLEKAGLTMADIDVFEFHEAFAGQILANMKAMDSDWFAQNYMGRKSKVGAPPLEKFNTW 420
Query: 415 GGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHP 467
GGSLS+GHPF ATG RL + AA+RL +E GQ+GLIAACAAGGQG M++E +P
Sbjct: 421 GGSLSLGHPFGATGCRLAITAAHRLKKEGGQYGLIAACAAGGQGHAMLVELYP 473
|
|
| UNIPROTKB|O46629 HADHB "Trifunctional enzyme subunit beta, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1504 (534.5 bits), Expect = 3.1e-154, P = 3.1e-154
Identities = 286/431 (66%), Positives = 351/431 (81%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ +NIV VDGVRTPFLLSGT Y ++M H+LAR +L G+L +T + KD++DYI+
Sbjct: 44 KKTLAKPNIRNIVVVDGVRTPFLLSGTSYKDLMPHDLARAALSGLLHRTSVPKDVVDYII 103
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQXXXXXXXXXXXXXXXXXXX 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACISSNQ
Sbjct: 104 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVA 163
Query: 158 XXXEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
E MSDIPIRHSRKMR ++L NKAKT A RL +++ R +F PELPAV+EFS+ ET
Sbjct: 164 GGVELMSDIPIRHSRKMRKMMLDLNKAKTLAQRLSIISKFRLNFLSPELPAVSEFSTSET 223
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF +SR+EQDEYALRSH+LA++AQ++G L+D++P +V G T+++DNG+R
Sbjct: 224 MGHSADRLAAAFAISREEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGRDTVTQDNGIR 283
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ +QMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM E KA +G KPKAYLRDF+Y
Sbjct: 284 PSSLDQMAKLKPAFIKPYGTVTAANSSFLTDGASAVLIMAEEKALAMGYKPKAYLRDFMY 343
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DID +E HEAF+GQILANLKAMDS+WFA+NY
Sbjct: 344 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDVFEFHEAFSGQILANLKAMDSDWFAQNY 403
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG+P L KFNNWGGSLS+GHPF ATG RL + AANRL +E GQ+GL+AACAAGG
Sbjct: 404 MGRKAKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGG 463
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 464 QGHAMIVEAYP 474
|
|
| ZFIN|ZDB-GENE-030131-8550 hadhb "hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1504 (534.5 bits), Expect = 3.1e-154, P = 3.1e-154
Identities = 302/471 (64%), Positives = 358/471 (76%)
Query: 1 MAQQLTKKIIKNALNVPQTITNMSLKSICTSHNVYSPRKSVKD--KTG-KNIVFVDGVRT 57
MA L + + L Q + + +S+ TS ++ + KS K K G KNIV V+GVRT
Sbjct: 1 MASMLMTSLRSSPLTSVQAV-QFAARSLSTSVHLQAQAKSKKSLAKPGVKNIVLVEGVRT 59
Query: 58 PFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALS 117
PFLLSGT Y+++M H+LAR +L G+L++TGI KD +DYIVYG VIQEVKTSN+ REAAL
Sbjct: 60 PFLLSGTTYSDLMPHDLARAALQGLLKRTGIPKDAVDYIVYGAVIQEVKTSNVAREAALG 119
Query: 118 AGFSDKTPAHTVTMACISSNQXXXXXXXXXXXXXXXXXXXXXXEFMSDIPIRHSRKMRSL 177
AGFSDKTPAHTVTMACISSNQ EFMSD+PIRHSRKMR
Sbjct: 120 AGFSDKTPAHTVTMACISSNQAMTTAVGLIAAGQCDAVVAGGVEFMSDVPIRHSRKMRKT 179
Query: 178 LLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQD 237
+L NKAKT RL LL +IR PELPAVAE S+ ETMGHSADRLAAAF VSR EQD
Sbjct: 180 MLSLNKAKTLGARLSLLGSIRLAHLAPELPAVAELSTAETMGHSADRLAAAFGVSRLEQD 239
Query: 238 EYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVRVSTPEQMAKLKPAFVKPHGS 296
E+ALRSHTLA++AQ+ G L+D++ +V G +SKDNG+R ST EQMAKLKPAFVKPHG+
Sbjct: 240 EFALRSHTLAKKAQDGGLLSDVVGFEVPGKDIVSKDNGIRPSTMEQMAKLKPAFVKPHGT 299
Query: 297 VTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQV 356
VTAANSSFLTDGASA +IM+E KA +G KPKAYLRDFVYVSQDPKDQLLLGP YATP+V
Sbjct: 300 VTAANSSFLTDGASAVLIMSEEKALAMGYKPKAYLRDFVYVSQDPKDQLLLGPTYATPKV 359
Query: 357 LERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGG 416
LE++GL++ DID +E HEAFAGQI+ANLKAM S+WFA+ YMGR +KVGVP + KFN WGG
Sbjct: 360 LEKSGLTMDDIDVFEFHEAFAGQIMANLKAMGSDWFAQTYMGRKTKVGVPPMEKFNTWGG 419
Query: 417 SLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHP 467
SLS+GHPF ATG RL A+RL +E GQ+GL+AACAAGGQG M+IE +P
Sbjct: 420 SLSLGHPFGATGCRLVTTVAHRLQKEGGQYGLVAACAAGGQGHAMVIEAYP 470
|
|
| UNIPROTKB|Q8HXX4 HADHB "Trifunctional enzyme subunit beta, mitochondrial" [Macaca fascicularis (taxid:9541)] | Back alignment and assigned GO terms |
|---|
Score = 1503 (534.1 bits), Expect = 4.0e-154, P = 4.0e-154
Identities = 287/431 (66%), Positives = 349/431 (80%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ +N+V VDGVRTPFLLSGT Y ++M H+LAR +L G+L +T + K+++DYI+
Sbjct: 44 KKTLAKPNIRNVVVVDGVRTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYII 103
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQXXXXXXXXXXXXXXXXXXX 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACIS+NQ
Sbjct: 104 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVA 163
Query: 158 XXXEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
E MSDIPIRHSRKMR L+L NKAK+ RL L++ R +F PELPAVAEFS+ ET
Sbjct: 164 GGVELMSDIPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRLNFLAPELPAVAEFSTSET 223
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF VSR EQDEYALRSH+LA++AQ++G L+D++P +V G T++KDNG+R
Sbjct: 224 MGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVVPFRVPGKDTVTKDNGIR 283
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ EQMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM E KA +G KPKAYLRDF+Y
Sbjct: 284 PSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLRDFMY 343
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DIDA+E HEAF+GQILAN KAMDS+WFA+NY
Sbjct: 344 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAENY 403
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG+P L KFNNWGGSLS+GHPF ATG RL + AANRL +E GQ+GL+AACAAGG
Sbjct: 404 MGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGG 463
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 464 QGHAMIVEAYP 474
|
|
| UNIPROTKB|F1SDN2 HADHB "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1500 (533.1 bits), Expect = 8.2e-154, P = 8.2e-154
Identities = 288/431 (66%), Positives = 346/431 (80%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ +NIV VDGVR PFL SGT Y +M H+LAR +L+G+L +T + KD++DY+V
Sbjct: 44 KKTLAKPNIRNIVVVDGVRIPFLQSGTSYKELMPHDLARAALLGLLHRTSVPKDVVDYLV 103
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQXXXXXXXXXXXXXXXXXXX 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACISSNQ
Sbjct: 104 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTGVSLIASGQFDVVVA 163
Query: 158 XXXEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
E MSDIPIRHSRKMR ++L NKAKT RL L++ R +F PELPAVAEFS+ ET
Sbjct: 164 GGVELMSDIPIRHSRKMRKMMLDLNKAKTLGQRLSLISKFRLNFLSPELPAVAEFSTSET 223
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF VSR EQDEYALRSH+LA++AQ++G L+D++P +V G T+++DNG+R
Sbjct: 224 MGHSADRLAAAFAVSRSEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGKDTVTQDNGIR 283
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ EQMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM E KA +G KPKAYLRDF Y
Sbjct: 284 PSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAVLIMAEEKALAMGYKPKAYLRDFTY 343
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DIDA+E HEAF+GQILANLKAMDS+WFA+NY
Sbjct: 344 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANLKAMDSDWFAQNY 403
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG P L KFNNWGGSLS+GHPF ATG RL + AANRL +E GQ+GL+AACAAGG
Sbjct: 404 MGRKAKVGSPPLEKFNNWGGSLSLGHPFGATGCRLVMTAANRLRKEGGQYGLVAACAAGG 463
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 464 QGHAMIVEAYP 474
|
|
| UNIPROTKB|B4E2W0 HADHB "cDNA FLJ56214, highly similar to Trifunctional enzyme subunit beta, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1498 (532.4 bits), Expect = 1.3e-153, P = 1.3e-153
Identities = 285/431 (66%), Positives = 349/431 (80%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ +N+V VDGVRTPFLLSGT Y ++M H+LAR +L G+L +T + K+++DYI+
Sbjct: 21 KKTLAKPNIRNVVVVDGVRTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYII 80
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQXXXXXXXXXXXXXXXXXXX 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACIS+NQ
Sbjct: 81 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVA 140
Query: 158 XXXEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
E MSD+PIRHSRKMR L+L NKAK+ RL L++ R +F PELPAV+EFS+ ET
Sbjct: 141 GGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFNFLAPELPAVSEFSTSET 200
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF VSR EQDEYALRSH+LA++AQ++G L+D++P +V G T++KDNG+R
Sbjct: 201 MGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGKDTVTKDNGIR 260
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ EQMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM E KA +G KPKAYLRDF+Y
Sbjct: 261 PSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLRDFMY 320
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DIDA+E HEAF+GQILAN KAMDS+WFA+NY
Sbjct: 321 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAENY 380
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG+P L KFNNWGGSLS+GHPF ATG RL + AANRL +E GQ+GL+AACAAGG
Sbjct: 381 MGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGG 440
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 441 QGHAMIVEAYP 451
|
|
| UNIPROTKB|P55084 HADHB "Trifunctional enzyme subunit beta, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1498 (532.4 bits), Expect = 1.3e-153, P = 1.3e-153
Identities = 285/431 (66%), Positives = 349/431 (80%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ +N+V VDGVRTPFLLSGT Y ++M H+LAR +L G+L +T + K+++DYI+
Sbjct: 43 KKTLAKPNIRNVVVVDGVRTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYII 102
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQXXXXXXXXXXXXXXXXXXX 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACIS+NQ
Sbjct: 103 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVA 162
Query: 158 XXXEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
E MSD+PIRHSRKMR L+L NKAK+ RL L++ R +F PELPAV+EFS+ ET
Sbjct: 163 GGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFNFLAPELPAVSEFSTSET 222
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF VSR EQDEYALRSH+LA++AQ++G L+D++P +V G T++KDNG+R
Sbjct: 223 MGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGKDTVTKDNGIR 282
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ EQMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM E KA +G KPKAYLRDF+Y
Sbjct: 283 PSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLRDFMY 342
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DIDA+E HEAF+GQILAN KAMDS+WFA+NY
Sbjct: 343 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAENY 402
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG+P L KFNNWGGSLS+GHPF ATG RL + AANRL +E GQ+GL+AACAAGG
Sbjct: 403 MGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGG 462
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 463 QGHAMIVEAYP 473
|
|
| UNIPROTKB|Q5R1W7 HADHB "Trifunctional enzyme subunit beta, mitochondrial" [Pan troglodytes (taxid:9598)] | Back alignment and assigned GO terms |
|---|
Score = 1498 (532.4 bits), Expect = 1.3e-153, P = 1.3e-153
Identities = 285/431 (66%), Positives = 349/431 (80%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97
+K++ +N+V VDGVRTPFLLSGT Y ++M H+LAR +L G+L +T + K+++DYI+
Sbjct: 44 KKTLAKPNIRNVVVVDGVRTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYII 103
Query: 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQXXXXXXXXXXXXXXXXXXX 157
+GTVIQEVKTSN+ REAAL AGFSDKTPAHTVTMACIS+NQ
Sbjct: 104 FGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVA 163
Query: 158 XXXEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGET 217
E MSD+PIRHSRKMR L+L NKAK+ RL L++ R +F PELPAV+EFS+ ET
Sbjct: 164 GGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFNFLAPELPAVSEFSTSET 223
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVR 276
MGHSADRLAAAF VSR EQDEYALRSH+LA++AQ++G L+D++P +V G T++KDNG+R
Sbjct: 224 MGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGKDTVTKDNGIR 283
Query: 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
S+ EQMAKLKPAF+KP+G+VTAANSSFLTDGASA +IM E KA +G KPKAYLRDF+Y
Sbjct: 284 PSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLRDFMY 343
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
VSQDPKDQLLLGP YATP+VLE+AGL+++DIDA+E HEAF+GQILAN KAMDS+WFA+NY
Sbjct: 344 VSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAENY 403
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
MGR +KVG+P L KFNNWGGSLS+GHPF ATG RL + AANRL +E GQ+GL+AACAAGG
Sbjct: 404 MGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGG 463
Query: 457 QGVGMIIERHP 467
QG MI+E +P
Sbjct: 464 QGHAMIVEAYP 474
|
|
| UNIPROTKB|J9NZC6 HADHB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1490 (529.6 bits), Expect = 9.5e-153, P = 9.5e-153
Identities = 297/468 (63%), Positives = 357/468 (76%)
Query: 11 KNALNVPQTITNMSLKSI-CTSHNVYSPRKSVKDKTG------KNIVFVDGVRTPFLLSG 63
KN N + S++ + C+S +P K K +NIV VDGVR PFL SG
Sbjct: 10 KNLPNASKWALRFSVRPLSCSSQLRAAPAAQTKSKKTLAKPNIRNIVVVDGVRIPFLQSG 69
Query: 64 TDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDK 123
T Y ++M H+LAR +L G+L +T + KD++DYI++GTVIQEVKTSN+ REAAL AGFSDK
Sbjct: 70 TSYKDLMPHDLARAALSGLLHRTNVPKDVVDYIIFGTVIQEVKTSNVAREAALGAGFSDK 129
Query: 124 TPAHTVTMACISSNQXXXXXXXXXXXXXXXXXXXXXXEFMSDIPIRHSRKMRSLLLRANK 183
TPAHTVTMACIS+NQ E MSD+PIRHSRKMR ++L NK
Sbjct: 130 TPAHTVTMACISANQAMTTGVGLIASGQCDVVVAGGVELMSDVPIRHSRKMRKMMLDLNK 189
Query: 184 AKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRS 243
AKT RL LL+ R +F PELPAVAEFS+ ETMGHSADRLAAAF VSR +QDEYALRS
Sbjct: 190 AKTLGQRLSLLSKFRLNFLSPELPAVAEFSTSETMGHSADRLAAAFAVSRADQDEYALRS 249
Query: 244 HTLAQQAQEKGYLTDILPIQV-GDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANS 302
H+LA++AQ++G L+DI+P +V G T++KDNG+R S+ EQMAKLKPAF+KP+G+VTAANS
Sbjct: 250 HSLAKKAQDEGLLSDIVPFKVPGKDTVTKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANS 309
Query: 303 SFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGL 362
SFLTDGASA +IM E KA +G KPKAYLRDFVYVSQDPKDQLLLGP YATP+VLE+AGL
Sbjct: 310 SFLTDGASAMLIMAEEKALAMGYKPKAYLRDFVYVSQDPKDQLLLGPTYATPKVLEKAGL 369
Query: 363 SLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSK---VGVPDLNKFNNWGGSLS 419
+L+DIDA+E HEAF+GQILAN KAMDS+WFA+NYMGR +K VG P L KFNNWGGSLS
Sbjct: 370 TLNDIDAFEFHEAFSGQILANFKAMDSDWFAQNYMGRKTKGSQVGSPPLEKFNNWGGSLS 429
Query: 420 IGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHP 467
+GHPF ATG RL + AANRL +E GQ+GL+AACAAGGQG MI+E +P
Sbjct: 430 LGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGGQGHAMIVEAYP 477
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A3D685 | FADI_SHEB5 | 2, ., 3, ., 1, ., 1, 6 | 0.4064 | 0.9088 | 0.9839 | yes | N/A |
| Q5QXN5 | FADI_IDILO | 2, ., 3, ., 1, ., 1, 6 | 0.4255 | 0.8877 | 0.9610 | yes | N/A |
| B7NP25 | FADI_ECO7I | 2, ., 3, ., 1, ., 1, 6 | 0.4135 | 0.8855 | 0.9587 | yes | N/A |
| A4WCW7 | FADI_ENT38 | 2, ., 3, ., 1, ., 1, 6 | 0.4228 | 0.8855 | 0.9587 | yes | N/A |
| A6WQ26 | FADI_SHEB8 | 2, ., 3, ., 1, ., 1, 6 | 0.4064 | 0.9088 | 0.9839 | yes | N/A |
| B7UFZ9 | FADI_ECO27 | 2, ., 3, ., 1, ., 1, 6 | 0.4135 | 0.8855 | 0.9587 | yes | N/A |
| B5XVW1 | FADI_KLEP3 | 2, ., 3, ., 1, ., 1, 6 | 0.4228 | 0.8855 | 0.9587 | yes | N/A |
| A4TM83 | FADI_YERPP | 2, ., 3, ., 1, ., 1, 6 | 0.4438 | 0.8283 | 0.8967 | yes | N/A |
| P55084 | ECHB_HUMAN | 2, ., 3, ., 1, ., 1, 6 | 0.6960 | 0.9110 | 0.9071 | yes | N/A |
| Q99JY0 | ECHB_MOUSE | 2, ., 3, ., 1, ., 1, 6 | 0.6983 | 0.9110 | 0.9052 | yes | N/A |
| B7LLC9 | FADI_ESCF3 | 2, ., 3, ., 1, ., 1, 6 | 0.4164 | 0.8919 | 0.9655 | yes | N/A |
| P34255 | YKA3_CAEEL | No assigned EC number | 0.5820 | 0.9364 | 0.9866 | yes | N/A |
| B5BBA0 | FADI_SALPK | 2, ., 3, ., 1, ., 1, 6 | 0.4164 | 0.8919 | 0.9655 | yes | N/A |
| A8GH87 | FADI_SERP5 | 2, ., 3, ., 1, ., 1, 6 | 0.4415 | 0.8855 | 0.9587 | yes | N/A |
| Q1C659 | FADI_YERPA | 2, ., 3, ., 1, ., 1, 6 | 0.4438 | 0.8283 | 0.8967 | yes | N/A |
| Q6LTK4 | FADI_PHOPR | 2, ., 3, ., 1, ., 1, 6 | 0.4245 | 0.9004 | 0.9747 | yes | N/A |
| C6DAL8 | FADI_PECCP | 2, ., 3, ., 1, ., 1, 6 | 0.4422 | 0.8347 | 0.9016 | yes | N/A |
| A4Y898 | FADI_SHEPC | 2, ., 3, ., 1, ., 1, 6 | 0.4087 | 0.9088 | 0.9839 | yes | N/A |
| Q1CHK1 | FADI_YERPN | 2, ., 3, ., 1, ., 1, 6 | 0.4438 | 0.8283 | 0.8967 | yes | N/A |
| Q6D2L6 | FADI_ERWCT | 2, ., 3, ., 1, ., 1, 6 | 0.4447 | 0.8347 | 0.9016 | yes | N/A |
| A0KK76 | FADI_AERHH | 2, ., 3, ., 1, ., 1, 6 | 0.4211 | 0.8919 | 0.9655 | yes | N/A |
| Q8ZD46 | FADI_YERPE | 2, ., 3, ., 1, ., 1, 6 | 0.4438 | 0.8283 | 0.8967 | yes | N/A |
| A8ADP1 | FADI_CITK8 | 2, ., 3, ., 1, ., 1, 6 | 0.4164 | 0.8919 | 0.9655 | yes | N/A |
| Q57LW5 | FADI_SALCH | 2, ., 3, ., 1, ., 1, 6 | 0.4141 | 0.8919 | 0.9655 | yes | N/A |
| A1JK23 | FADI_YERE8 | 2, ., 3, ., 1, ., 1, 6 | 0.4389 | 0.8283 | 0.8967 | yes | N/A |
| B1JGG1 | FADI_YERPY | 2, ., 3, ., 1, ., 1, 6 | 0.4438 | 0.8283 | 0.8967 | yes | N/A |
| B8EE97 | FADI_SHEB2 | 2, ., 3, ., 1, ., 1, 6 | 0.4064 | 0.9088 | 0.9839 | yes | N/A |
| A9KTW7 | FADI_SHEB9 | 2, ., 3, ., 1, ., 1, 6 | 0.4064 | 0.9088 | 0.9839 | yes | N/A |
| A7FGK0 | FADI_YERP3 | 2, ., 3, ., 1, ., 1, 6 | 0.4438 | 0.8283 | 0.8967 | yes | N/A |
| B2K8J6 | FADI_YERPB | 2, ., 3, ., 1, ., 1, 6 | 0.4438 | 0.8283 | 0.8967 | yes | N/A |
| A6TC20 | FADI_KLEP7 | 2, ., 3, ., 1, ., 1, 6 | 0.4182 | 0.8855 | 0.9587 | yes | N/A |
| B1LME8 | FADI_ECOSM | 2, ., 3, ., 1, ., 1, 6 | 0.4158 | 0.8855 | 0.9587 | yes | N/A |
| Q60587 | ECHB_RAT | 2, ., 3, ., 1, ., 1, 6 | 0.6838 | 0.9300 | 0.9242 | yes | N/A |
| Q9KT59 | FADI_VIBCH | 2, ., 3, ., 1, ., 1, 6 | 0.4176 | 0.9046 | 0.9816 | yes | N/A |
| A1RI91 | FADI_SHESW | 2, ., 3, ., 1, ., 1, 6 | 0.4110 | 0.9088 | 0.9839 | yes | N/A |
| B5R3S0 | FADI_SALEP | 2, ., 3, ., 1, ., 1, 6 | 0.4141 | 0.8919 | 0.9655 | yes | N/A |
| A9R7W9 | FADI_YERPG | 2, ., 3, ., 1, ., 1, 6 | 0.4413 | 0.8283 | 0.8967 | yes | N/A |
| Q8HXX4 | ECHB_MACFA | 2, ., 3, ., 1, ., 1, 6 | 0.7006 | 0.9110 | 0.9052 | N/A | N/A |
| B7N5V3 | FADI_ECOLU | 2, ., 3, ., 1, ., 1, 6 | 0.4135 | 0.8855 | 0.9587 | yes | N/A |
| Q7N287 | FADI_PHOLL | 2, ., 3, ., 1, ., 1, 6 | 0.4205 | 0.8855 | 0.9587 | yes | N/A |
| O46629 | ECHB_BOVIN | 2, ., 3, ., 1, ., 1, 6 | 0.6983 | 0.9110 | 0.9052 | yes | N/A |
| A7MH80 | FADI_CROS8 | 2, ., 3, ., 1, ., 1, 6 | 0.4228 | 0.8855 | 0.9587 | yes | N/A |
| A9N452 | FADI_SALPB | 2, ., 3, ., 1, ., 1, 6 | 0.4141 | 0.8919 | 0.9655 | yes | N/A |
| Q5E3U0 | FADI_VIBF1 | 2, ., 3, ., 1, ., 1, 6 | 0.4188 | 0.8919 | 0.9524 | yes | N/A |
| A4SMT9 | FADI_AERS4 | 2, ., 3, ., 1, ., 1, 6 | 0.4235 | 0.8919 | 0.9655 | yes | N/A |
| B7LBJ6 | FADI_ECO55 | 2, ., 3, ., 1, ., 1, 6 | 0.4135 | 0.8855 | 0.9587 | yes | N/A |
| A5F2P1 | FADI_VIBC3 | 2, ., 3, ., 1, ., 1, 6 | 0.4176 | 0.9046 | 0.9816 | yes | N/A |
| Q668V0 | FADI_YERPS | 2, ., 3, ., 1, ., 1, 6 | 0.4438 | 0.8283 | 0.8967 | yes | N/A |
| Q5R1W7 | ECHB_PANTR | 2, ., 3, ., 1, ., 1, 6 | 0.6960 | 0.9110 | 0.9052 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.976 |
| 3rd Layer | 2.3.1.16 | 0.991 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 472 | |||
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 1e-161 | |
| PRK08963 | 428 | PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | 1e-150 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 1e-149 | |
| PRK09268 | 427 | PRK09268, PRK09268, acetyl-CoA acetyltransferase; | 1e-117 | |
| TIGR02446 | 430 | TIGR02446, FadI, fatty oxidation complex, beta sub | 1e-114 | |
| PRK08170 | 426 | PRK08170, PRK08170, acetyl-CoA acetyltransferase; | 1e-103 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 3e-99 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 1e-90 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 6e-84 | |
| PRK06205 | 404 | PRK06205, PRK06205, acetyl-CoA acetyltransferase; | 5e-79 | |
| PRK06445 | 394 | PRK06445, PRK06445, acetyl-CoA acetyltransferase; | 4e-76 | |
| PRK08947 | 387 | PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | 3e-74 | |
| PRK07850 | 387 | PRK07850, PRK07850, acetyl-CoA acetyltransferase; | 9e-74 | |
| PRK09051 | 394 | PRK09051, PRK09051, beta-ketothiolase; Provisional | 1e-71 | |
| TIGR02430 | 400 | TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | 1e-66 | |
| PLN02644 | 394 | PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | 3e-65 | |
| TIGR02445 | 385 | TIGR02445, fadA, fatty oxidation complex, beta sub | 9e-65 | |
| PRK07801 | 382 | PRK07801, PRK07801, acetyl-CoA acetyltransferase; | 6e-64 | |
| PRK08235 | 393 | PRK08235, PRK08235, acetyl-CoA acetyltransferase; | 8e-64 | |
| PRK07661 | 391 | PRK07661, PRK07661, acetyl-CoA acetyltransferase; | 6e-63 | |
| PRK07851 | 406 | PRK07851, PRK07851, acetyl-CoA acetyltransferase; | 7e-63 | |
| PRK09050 | 401 | PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; | 3e-61 | |
| PRK07108 | 392 | PRK07108, PRK07108, acetyl-CoA acetyltransferase; | 5e-60 | |
| PRK13359 | 400 | PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; | 1e-59 | |
| PLN02287 | 452 | PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | 7e-58 | |
| PRK08242 | 402 | PRK08242, PRK08242, acetyl-CoA acetyltransferase; | 7e-57 | |
| PRK08131 | 401 | PRK08131, PRK08131, acetyl-CoA acetyltransferase; | 5e-56 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 2e-55 | |
| pfam02803 | 123 | pfam02803, Thiolase_C, Thiolase, C-terminal domain | 4e-51 | |
| PRK05656 | 393 | PRK05656, PRK05656, acetyl-CoA acetyltransferase; | 1e-50 | |
| PRK06504 | 390 | PRK06504, PRK06504, acetyl-CoA acetyltransferase; | 3e-50 | |
| PRK06954 | 397 | PRK06954, PRK06954, acetyl-CoA acetyltransferase; | 1e-48 | |
| PRK06633 | 392 | PRK06633, PRK06633, acetyl-CoA acetyltransferase; | 1e-48 | |
| PRK06366 | 388 | PRK06366, PRK06366, acetyl-CoA acetyltransferase; | 3e-46 | |
| PRK06690 | 361 | PRK06690, PRK06690, acetyl-CoA acetyltransferase; | 3e-43 | |
| PRK06025 | 417 | PRK06025, PRK06025, acetyl-CoA acetyltransferase; | 2e-39 | |
| cd00826 | 393 | cd00826, nondecarbox_cond_enzymes, nondecarboxylat | 6e-32 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 1e-10 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 3e-10 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 8e-10 | |
| PRK06064 | 389 | PRK06064, PRK06064, acetyl-CoA acetyltransferase; | 6e-09 | |
| PRK06064 | 389 | PRK06064, PRK06064, acetyl-CoA acetyltransferase; | 8e-08 | |
| PRK07516 | 389 | PRK07516, PRK07516, acetyl-CoA acetyltransferase; | 6e-07 | |
| PTZ00455 | 438 | PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provi | 4e-06 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 1e-05 | |
| PRK12578 | 385 | PRK12578, PRK12578, acetyl-CoA acetyltransferase; | 3e-05 | |
| PRK06289 | 403 | PRK06289, PRK06289, acetyl-CoA acetyltransferase; | 4e-05 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 3e-04 | |
| PRK12578 | 385 | PRK12578, PRK12578, acetyl-CoA acetyltransferase; | 3e-04 | |
| PRK08256 | 391 | PRK08256, PRK08256, lipid-transfer protein; Provis | 0.001 | |
| PTZ00455 | 438 | PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provi | 0.002 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 0.002 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 460 bits (1187), Expect = e-161
Identities = 160/422 (37%), Positives = 224/422 (53%), Gaps = 42/422 (9%)
Query: 50 VFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSN 109
V V VRTP G ++ A +L + +L++ G+ + +D ++ G V+Q + N
Sbjct: 1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQN 60
Query: 110 IGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIR 169
R+AAL AG + PA TV C S Q + IAAG DVVVAGGVE MS P
Sbjct: 61 PARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYL 120
Query: 170 HSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAF 229
+ R L N L + D ++ MG +A+ +A +
Sbjct: 121 LPKARRGGRLGLNT----------LDGMLDDGLTDPFTGLS-------MGITAENVAEKY 163
Query: 230 KVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDNGVRV-STPEQM 283
+SR+EQDE+ALRSH A AQE G D I+P++V G + +D G R +T E++
Sbjct: 164 GISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKL 223
Query: 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343
AKLKPAF K G+VTA N+S + DGA+A ++M+E KAK+LGLKP A + + DP
Sbjct: 224 AKLKPAF-KKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDP-A 281
Query: 344 QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
+ +GP A P+ L+RAGL+L DID E++EAFA Q LA LK +
Sbjct: 282 IMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGL-------------- 327
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMII 463
D K N GG++++GHP A+G R+ V + L R G++GL C GGQG M+I
Sbjct: 328 ---DPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGGRYGLATMCIGGGQGAAMVI 384
Query: 464 ER 465
ER
Sbjct: 385 ER 386
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 435 bits (1120), Expect = e-150
Identities = 185/424 (43%), Positives = 263/424 (62%), Gaps = 4/424 (0%)
Query: 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEV 105
G I V G+RTPF T + + A +L + + +L ++ I +LI+ +V+G V+Q
Sbjct: 4 GDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMP 63
Query: 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
+ NI RE L G + T A++V+ AC +S Q + I AG D+ +AGG + S
Sbjct: 64 EAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSV 123
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225
+PI S+K+ L+ NKA+T RLKL + +R +P PAVAE+S+G MG +A+++
Sbjct: 124 LPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQM 183
Query: 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD---ILPIQVGDKTISKDNGVRV-STPE 281
A + +SR+EQD A RSH LA QA +G L D + + + +DN +R ST E
Sbjct: 184 AKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDSTLE 243
Query: 282 QMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDP 341
AKL+PAF + HG+VTAANS+ LTDGA+A ++M+E++AK LGL P YLR + + + D
Sbjct: 244 DYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDV 303
Query: 342 KDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSS 401
+LLGPAYATP LERAGL+L+D+ ++HEAFA Q LANL+ SE FA+ +GRS
Sbjct: 304 WQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQ 363
Query: 402 KVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGM 461
+G D++KFN GGS++ GHPFAATG R+ + L R G GL ACAAGG G M
Sbjct: 364 AIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGLGLTTACAAGGLGAAM 423
Query: 462 IIER 465
++E
Sbjct: 424 VLEV 427
|
Length = 428 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 430 bits (1107), Expect = e-149
Identities = 162/420 (38%), Positives = 233/420 (55%), Gaps = 40/420 (9%)
Query: 51 FVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNI 110
V RTP G ++ A +L + +L++ + +LID +++G V+Q + NI
Sbjct: 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNI 60
Query: 111 GREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRH 170
R+AAL AG + PA+TV C S Q + LI AG DVVVAGGVE MS +P
Sbjct: 61 ARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSV 120
Query: 171 SRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFK 230
R R ++ A+ LK + G +MG +A+ LA +
Sbjct: 121 PRSRRW-GVKPGNAELEDQILKDGLDDPLN--------------GLSMGLTAENLAKKYG 165
Query: 231 VSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDNGVRV-STPEQMA 284
+SR+EQDEYALRSH A +A E+G D I+P+ V G +S D G+R +T E++A
Sbjct: 166 ISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVVVSSDEGIRPNTTLEKLA 225
Query: 285 KLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ 344
KLKPAF P+G+VTA NSS L DGA+A ++M+E KAK+LGL P A + + DP +
Sbjct: 226 KLKPAF-DPNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDP-EI 283
Query: 345 LLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVG 404
+ LGP A P+ L++AGLS+SDID +E++EAFA Q+LA +K +
Sbjct: 284 MGLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQVLACIKELGL--------------- 328
Query: 405 VPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464
DL K N GG++++GHP A+G R+ + L R G++GL C GGQG+ +I+E
Sbjct: 329 --DLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQGIAVILE 386
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 349 bits (899), Expect = e-117
Identities = 163/431 (37%), Positives = 239/431 (55%), Gaps = 16/431 (3%)
Query: 44 KTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ 103
T + + + G R PF S YA+ ++ +L G++ + G+ + + +V G V++
Sbjct: 4 PTVRRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLK 63
Query: 104 EVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
+ N+ RE L + S TPA+ + AC + + IA G D +AGGV+
Sbjct: 64 HSRDFNLTRECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTT 123
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
SD PI + +R +LL N+AKT DRLK L +RP PE+P E +G +MG A
Sbjct: 124 SDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLSMGEHAA 183
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRV-STPEQ 282
A + +SR+ QDE A SH A ++G+ D++ +G +++DN +R S+ E+
Sbjct: 184 ITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLG---LTRDNNLRPDSSLEK 240
Query: 283 MAKLKPAF-VKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLR-------DF 334
+AKLKP F ++TA NS+ LTDGAS ++ +E A + GL AYL DF
Sbjct: 241 LAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDF 300
Query: 335 VYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAK 394
V K+ LL+ PAYA P++L R GL+L D D +E+HEAFA Q+LA LKA + E + +
Sbjct: 301 V----HGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCR 356
Query: 395 NYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAA 454
+G + +G D +K N G SL+ GHPFAATG R+ A L + GLI+ CAA
Sbjct: 357 ERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAEKGSGRGLISICAA 416
Query: 455 GGQGVGMIIER 465
GGQGV I+ER
Sbjct: 417 GGQGVTAILER 427
|
Length = 427 |
| >gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Score = 342 bits (879), Expect = e-114
Identities = 181/428 (42%), Positives = 263/428 (61%), Gaps = 4/428 (0%)
Query: 41 VKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100
VK + G+ I V G+RTPF T + + A +L + + +L ++ I LI+ +V+G
Sbjct: 1 VKTRQGERIAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQ 60
Query: 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGV 160
V+Q + NI RE L G + T A++VT AC +S Q I AGA D+ +AGG
Sbjct: 61 VVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGA 120
Query: 161 EFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGH 220
+ S +PI S+K+ + L+ NKA+T +LK+ + + +P PAVAE+S+G +MG
Sbjct: 121 DSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQ 180
Query: 221 SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD---ILPIQVGDKTISKDNGVRV 277
+A+++A + ++R EQD A RSHTLA QA G L + I++DN +R
Sbjct: 181 TAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIRH 240
Query: 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
ST AKL+PAF + HGSVTAANS+ LTDGA+A ++M E +AK+LG++P Y+R + +
Sbjct: 241 NSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAF 300
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
+ D +L+GP+YATP L+RAGL+LSD+ ++HEAFA Q LAN++ S+ FA+
Sbjct: 301 TAIDVWQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQEN 360
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
+GRS +G D++KFN GGS++ GHPFAATG R+ L R G GL ACAAGG
Sbjct: 361 LGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKRRGGGLGLNTACAAGG 420
Query: 457 QGVGMIIE 464
G MI+E
Sbjct: 421 LGAAMILE 428
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430 |
| >gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 315 bits (809), Expect = e-103
Identities = 156/430 (36%), Positives = 231/430 (53%), Gaps = 16/430 (3%)
Query: 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEV 105
+ + VDG RTPFL + A +LA + +L + + D +D ++ G +
Sbjct: 2 ARPVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSP 61
Query: 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
+NI R AL G +K PA TV C S Q + + IA G D+V+AGGVE MS
Sbjct: 62 DEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSH 121
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL--------PAVAEFSSGET 217
P+ S KM L AK+ +L L +RP + P + P V G
Sbjct: 122 APLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVV-----GLN 176
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTI-SKDNGVR 276
MG +A+ LA F ++R++ D YA RSH AQ +G L +++P+ D D+GVR
Sbjct: 177 MGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGVR 236
Query: 277 V-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFV 335
S+ E++AKLKP F +P+G VTA NSS +TDGA ++ +E K+ GL P + D
Sbjct: 237 PDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQ 296
Query: 336 YVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKN 395
+ + DP Q+ LGP +A +L+R GL+L D+D WE++EAFA Q+LA L A E + +
Sbjct: 297 WAALDP-SQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCRE 355
Query: 396 YMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAG 455
+G +G D + N GG++++GHP A+G R+ +H + L R + G+ A C G
Sbjct: 356 QLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKRRGTKRGIAAICIGG 415
Query: 456 GQGVGMIIER 465
GQG M++ER
Sbjct: 416 GQGGAMLLER 425
|
Length = 426 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 302 bits (777), Expect = 3e-99
Identities = 151/431 (35%), Positives = 218/431 (50%), Gaps = 52/431 (12%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
K++V V RTP G ++ A EL + L++ G+ + +D ++ G V+Q
Sbjct: 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA 61
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N R+AAL AG + PA T+ C S + + I AG D+VVAGG E MS
Sbjct: 62 GQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQA 121
Query: 167 P--IRHSR---KMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHS 221
P + SR KM + L D L D F +G MG +
Sbjct: 122 PHVLPGSRWGQKMGDVELVDTMIH---DGLT-------DAF-----------NGYHMGIT 160
Query: 222 ADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTI-SKDNGV 275
A+ LA + ++R+EQDE+AL S A+ A + G D I+P+ + GD + D
Sbjct: 161 AENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHP 220
Query: 276 RV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDF 334
R +T E +AKL+PAF K G+VTA N+S + DGA+A V+M+EAKAK+LGL P A + +
Sbjct: 221 RPDTTAESLAKLRPAFDK-DGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSY 279
Query: 335 VYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAK 394
DP + +GP A + LE+AG SL+D+D E++EAFA Q LA K +
Sbjct: 280 AVAGVDPA-IMGIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQALAVEKEL--GL--- 333
Query: 395 NYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAA 454
D K N GG++++GHP A+G R+ V + + R + GL C
Sbjct: 334 ------------DPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRRGAKKGLATLCIG 381
Query: 455 GGQGVGMIIER 465
GGQGV +I+ER
Sbjct: 382 GGQGVALIVER 392
|
Length = 393 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 276 bits (707), Expect = 1e-90
Identities = 95/278 (34%), Positives = 144/278 (51%), Gaps = 23/278 (8%)
Query: 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT 107
++V V RTP G ++ A +L ++ L++ G+ + +D ++ G V+Q +
Sbjct: 1 DVVIVSAARTPIGSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEG 60
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
N R+AAL AG D PA T+ C S + + I AG D+VVAGGVE MS+ P
Sbjct: 61 QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSNAP 120
Query: 168 IRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAA 227
+ R AK LK + + + MG +A+ +A
Sbjct: 121 YVLP--ASRVGARMGDAKLVDTMLK--------------DGLTDAFNLIHMGITAENVAK 164
Query: 228 AFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GD-KTISKDNGVRV-STP 280
+ +SR+EQDE+ALRS A AQ+ G D I+P+ + G + KD G+R +T
Sbjct: 165 KYGISREEQDEFALRSQQKAAAAQKAGKFKDEIVPVTIKGRKGKPLVVDKDEGIRPGTTL 224
Query: 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEA 318
E +AKLKPAF K +G+VTA N+S L DGA+A ++M+E+
Sbjct: 225 ESLAKLKPAFDKENGTVTAGNASGLNDGAAAVLLMSES 262
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 263 bits (674), Expect = 6e-84
Identities = 135/428 (31%), Positives = 195/428 (45%), Gaps = 55/428 (12%)
Query: 52 VDGVRTPFL-LSGTDYANMMAHELARHSLIGILQKT--GISKDLIDYIVYGTVIQE-VKT 107
V RTPF A + A L + L++ + +D ++ G V+Q +
Sbjct: 7 VGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQG 66
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
NI R+AAL+AG PA TV AC S + IA+G DVV+AGGVE MSD P
Sbjct: 67 QNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAP 126
Query: 168 IRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAA 227
+ +++L + F L + + G MG +A+R A
Sbjct: 127 ------------------MGREGVRVLDSAVDPMFEDPLG---DATPGYLMGLTAERYAK 165
Query: 228 AFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVR---VSTPEQMA 284
+ +SR++QDE A++SH A + G+ +I P V + + D R T + A
Sbjct: 166 RYGISREDQDEVAVKSHKNAAANPKAGFFDEITPEDVLNSPVVADPLRRLDCSPTSDGAA 225
Query: 285 KLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ 344
L PAF + G+VTA N+S + DGA+A ++M+E+KAK+LGL P A +R + DP
Sbjct: 226 ALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDP--S 283
Query: 345 LLLGPAYATPQVLERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
++ GP A L AGL L D+ E EAFA L K +
Sbjct: 284 IMDGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDL------------- 330
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQ----FGLIAACAAGG-QG 458
N GG++++GHP ATG R+ V A +L GL C GG QG
Sbjct: 331 ------PVNPSGGAIALGHPIGATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQG 384
Query: 459 VGMIIERH 466
V ++ER
Sbjct: 385 VAAVLERV 392
|
Length = 392 |
| >gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 251 bits (642), Expect = 5e-79
Identities = 150/435 (34%), Positives = 215/435 (49%), Gaps = 50/435 (11%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
++ V + VRTP G + ++ A ELA + ++++TGI ID +++G +
Sbjct: 2 RDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE 61
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
IGR AAL AG P + C S Q + T + GA DVV+AGG E MS++
Sbjct: 62 APAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNV 121
Query: 167 P-----IRHSRKMRSLLLRANKAKTPADRL-KLLATIRPDFF-IPELPAVAEFSSGETMG 219
+R + + L DRL + T F +P G M
Sbjct: 122 EFYTTDMRWGVRGGGVQLH--------DRLARGRETAGGRRFPVP---------GG--MI 162
Query: 220 HSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKT-ISKDN 273
+A+ L + +SR+EQD A+RSH A AQE G D I+P+ V GD T + +D
Sbjct: 163 ETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDE 222
Query: 274 GVRV-STPEQMAKLKP--AFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY 330
R +T E +AKL+P P +VTA N+S D A+AC++ TE KA++LGL+P A
Sbjct: 223 HPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLAR 282
Query: 331 LRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSE 390
L + +P ++ +GP AT + L RAGL+L DID E++EAFA Q+LA LK E
Sbjct: 283 LVSWAVAGVEP-SRMGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLK----E 337
Query: 391 WFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIA 450
W G D + N G +S+GHP ATG R+ L R ++GL
Sbjct: 338 W----------GFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRRQARYGLET 387
Query: 451 ACAAGGQGVGMIIER 465
C GGQG+ + ER
Sbjct: 388 MCIGGGQGLAAVFER 402
|
Length = 404 |
| >gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 243 bits (622), Expect = 4e-76
Identities = 146/432 (33%), Positives = 215/432 (49%), Gaps = 53/432 (12%)
Query: 47 KNIVFVDGVRTPFLLSG------TDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100
+++ VD RT F + N+ ELA + +++KTGI + ID I+ G
Sbjct: 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61
Query: 101 VIQEVKT-SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGG 159
+Q + GR A PA V C SS ++ G IA G D+V+AGG
Sbjct: 62 ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121
Query: 160 VEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMG 219
VE M+ P+ + + KLL P + +L +G MG
Sbjct: 122 VEHMTRTPMGDNPHIEP-------------NPKLLT--DPKYIEYDLT------TGYVMG 160
Query: 220 HSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDNG 274
+A++LA + R+E D ++LRSH LA +A ++GY D ILPI+V K + D
Sbjct: 161 LTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQS 220
Query: 275 VRVSTP-EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRD 333
VR T E++AKL PAF KP G +TA NSS L GAS ++M++ K+ GLKP A +R
Sbjct: 221 VRPDTSLEKLAKLPPAF-KPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRS 279
Query: 334 FVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFA 393
F + P + GP A+ + LE+AGLS+ DID WE++EAFA +L +K
Sbjct: 280 FGFAGVPP-AIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIK-------- 330
Query: 394 KNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACA 453
++G+ D N GG+++IGHP ATG R+ A +L + +G+ C
Sbjct: 331 --------ELGL-DPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGKDYGVATLCV 381
Query: 454 AGGQGVGMIIER 465
GGQG +++ER
Sbjct: 382 GGGQGGAVVLER 393
|
Length = 394 |
| >gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 238 bits (609), Expect = 3e-74
Identities = 151/431 (35%), Positives = 219/431 (50%), Gaps = 58/431 (13%)
Query: 47 KNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQE 104
+++V VD +RTP S G + N+ A +L+ H + +L + + ID I++G V Q
Sbjct: 2 EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQT 61
Query: 105 VKTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
++ NI R AAL AG PA TV C SS Q + I G DV + GGVE M
Sbjct: 62 LEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHM 121
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
+P+ H D F P L ++G MG +A+
Sbjct: 122 GHVPMNHG----------------VD------------FHPGLSKNVAKAAG-MMGLTAE 152
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGD-----KTISKDNGVRV 277
L +SR++QD +A RSH A A ++G + I+P + D K D +R
Sbjct: 153 MLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRP 212
Query: 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
+T E +A L+PAF +G+VTA SS L+DGASA ++M+E++AK+LGLKP+A +R
Sbjct: 213 ETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAV 272
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
DP + GP AT + L+RAGLS+SDID +E++EAFA Q L LK +
Sbjct: 273 AGCDPS-IMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQSLPCLKDL--------- 322
Query: 397 MGRSSKVGVPDL--NKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAA 454
G+ D K N GG++++GHP +G R++ N + R+D QFGL C
Sbjct: 323 -------GLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCIG 375
Query: 455 GGQGVGMIIER 465
GQG+ + ER
Sbjct: 376 LGQGIATVFER 386
|
Length = 387 |
| >gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 236 bits (605), Expect = 9e-74
Identities = 145/431 (33%), Positives = 208/431 (48%), Gaps = 60/431 (13%)
Query: 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT 107
N V V+ VRTP + + A EL +L + GI ++ ++ G V Q +
Sbjct: 3 NPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQ 62
Query: 108 S-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
S NI R A L AG A T+ C S+ Q GLIAAGA DV +A GVE MS +
Sbjct: 63 SNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRV 122
Query: 167 PIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
P L AN RPD + ++P E +A+R+A
Sbjct: 123 P-----------LGANAGPGRG-------LPRPDSWDIDMPNQFE---------AAERIA 155
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYL-TDILPIQV-----------GDKTISKDNG 274
++R++ D + LRS A QA +G +I P+Q + +++D G
Sbjct: 156 KRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQG 215
Query: 275 VRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDF 334
+R +T E +A LKP V G TA SS ++DGA+A + M E +A+ LGL+P+A +
Sbjct: 216 LRDTTMEGLAGLKP--VLEGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQ 273
Query: 335 VYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAK 394
V +P L GP AT +VLE+AG+ + DID E++EAFA +L+ W
Sbjct: 274 ALVGAEPY-YHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFASVVLS--------W--- 321
Query: 395 NYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAA 454
++V PD++K N GG++++GHP +TG RL A + L R D LI CA
Sbjct: 322 ------AQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAG 375
Query: 455 GGQGVGMIIER 465
G G IIER
Sbjct: 376 GALSTGTIIER 386
|
Length = 387 |
| >gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Score = 231 bits (592), Expect = 1e-71
Identities = 146/428 (34%), Positives = 208/428 (48%), Gaps = 46/428 (10%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ-EV 105
+ +V V GVRT G ++ +L + L + G+ D + ++V+G VI E
Sbjct: 3 REVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEP 62
Query: 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
+ + R AA++AG +TPA V C S Q I + I G DV + GG E MS
Sbjct: 63 RDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSR 122
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL--PAVAEFSSGETMGHSAD 223
P LL A + KL+ D + L P F + MG +A+
Sbjct: 123 AP---------YLLPAARWGARMGDAKLV-----DMMVGALHDP----FGTIH-MGVTAE 163
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDNGVRVS 278
+AA + +SR+ QD AL SH A A GY D I+P+++ G+ D VR
Sbjct: 164 NVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRAD 223
Query: 279 -TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYV 337
T E +AKLKP F K +G+VTA N+S + DGA+A V+ A+ GLKP A L + +
Sbjct: 224 TTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHA 283
Query: 338 SQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM 397
DP + + +GP AT + LERAGL+++D+D E +EAFA Q A + +
Sbjct: 284 GVDP-EYMGIGPVPATQKALERAGLTVADLDVIEANEAFAAQACAVTRELGL-------- 334
Query: 398 GRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQ 457
D K N G +S+GHP ATG +TV A L R G++ L+ C GGQ
Sbjct: 335 ---------DPAKVNPNGSGISLGHPVGATGAIITVKALYELQRIGGRYALVTMCIGGGQ 385
Query: 458 GVGMIIER 465
G+ I ER
Sbjct: 386 GIAAIFER 393
|
Length = 394 |
| >gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 218 bits (557), Expect = 1e-66
Identities = 135/430 (31%), Positives = 210/430 (48%), Gaps = 42/430 (9%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQEV 105
+ D +RTP G +++ A +LA + +L + + ID ++YG Q
Sbjct: 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAG 60
Query: 106 KTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164
+ + N+ R AAL AG P TV C S I I AG D+++AGGVE MS
Sbjct: 61 EDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMS 120
Query: 165 DIPIRHSRKMRSLLLRANKAKTPADR-LKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
P KA + R K+ T FI P + ++M +A+
Sbjct: 121 RAP-----------FVMGKADSAFSRSAKIEDTTIGWRFIN--PLMKALYGVDSMPETAE 167
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDK-----TISKDNGVRV 277
+A F +SR++QD +ALRS AQ G+ + I+P+ + K + +D R
Sbjct: 168 NVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRP 227
Query: 278 STP-EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
T E +AKLKP +P G+VTA N+S + DGA+A ++ +E ++ GL P+A +
Sbjct: 228 ETTLEGLAKLKPVV-RPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAAT 286
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
+P+ + +GP AT ++L RAGLS+ D E++EAFA Q LA L+ +
Sbjct: 287 AGVEPR-IMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLREL--------- 336
Query: 397 MGRSSKVGVPDLN-KFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAG 455
G+ D + + N GG++++GHP A+G RL + A +L R G++ L C
Sbjct: 337 -------GLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERSGGRYALCTMCIGV 389
Query: 456 GQGVGMIIER 465
GQG+ + IER
Sbjct: 390 GQGIALAIER 399
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400 |
| >gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Score = 214 bits (548), Expect = 3e-65
Identities = 133/435 (30%), Positives = 210/435 (48%), Gaps = 55/435 (12%)
Query: 47 KNIVFVDGVRTP---FLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ 103
+++ V RTP FL S +++ A EL ++ L++ G+ L+ + +G V+
Sbjct: 1 RDVCIVGVARTPIGGFLGS---LSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVL- 56
Query: 104 EVKTSNIG----REAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGG 159
++N+G R+AAL AG T TV C S + + I G DVVVAGG
Sbjct: 57 ---SANLGQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGG 113
Query: 160 VEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMG 219
+E MS+ P L A K T+ L V + MG
Sbjct: 114 MESMSNAP--------KYLPEARKGSRLGH-----DTVVDGMLKDGLWDV---YNDFGMG 157
Query: 220 HSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKT------ISKD 272
A+ A + +SR+EQD YA++S+ A AQE G I+P++V + KD
Sbjct: 158 VCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKD 217
Query: 273 NGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLR 332
G+ P ++ KL+P+F + GSVTA N+S ++DGA+A V+++ KA +LGL+ A +R
Sbjct: 218 EGLGKFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIR 277
Query: 333 DFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWF 392
+ +Q P + PA A P+ L+ AGL S +D +E++EAF+ LAN K +
Sbjct: 278 GYADAAQAP-ELFTTAPALAIPKALKHAGLEASQVDYYEINEAFSVVALANQKLL----- 331
Query: 393 AKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAAC 452
G+ K N GG++S+GHP +G R+ V L ++G++G+ C
Sbjct: 332 -----------GLDP-EKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNGKYGVAGIC 379
Query: 453 AAGGQGVGMIIERHP 467
GG +++E
Sbjct: 380 NGGGGASAIVVELMQ 394
|
Length = 394 |
| >gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 9e-65
Identities = 144/430 (33%), Positives = 210/430 (48%), Gaps = 58/430 (13%)
Query: 48 NIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQEV 105
++V VD RTP S G + N A +L+ H + +L + + ++ I +G V Q +
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 106 KTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164
+ NI R AAL A + A TV C SS Q + I G DV + GGVE M
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 165 DIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADR 224
+P+ H F P + ++G MG +A+
Sbjct: 121 HVPMMHGVD----------------------------FHPGMSLHVAKAAG-MMGLTAEM 151
Query: 225 LAAAFKVSRKEQDEYALRSHTLAQQA-QEKGYLTDILPIQVGD-----KTISKDNGVRV- 277
L +SR++QD +A RSH A A QE + +I+P Q D K D +R
Sbjct: 152 LGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPE 211
Query: 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYV 337
+T E +A L+PAF +G+VTA SS L+DGASA ++M+E +A +LGLKP+A +R
Sbjct: 212 TTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVA 271
Query: 338 SQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM 397
DP + GP AT + L+RAGLS+SDID +E++EAFA Q L LK +
Sbjct: 272 GCDPS-IMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQALPCLKDL---------- 320
Query: 398 GRSSKVGVPDL--NKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAG 455
G+ D K N GG++++GHP +G R++ N + ++D FGL C
Sbjct: 321 ------GLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQKDATFGLATMCIGL 374
Query: 456 GQGVGMIIER 465
GQG+ + ER
Sbjct: 375 GQGIATVFER 384
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385 |
| >gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (538), Expect = 6e-64
Identities = 138/417 (33%), Positives = 201/417 (48%), Gaps = 45/417 (10%)
Query: 52 VDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ-EVKTSNI 110
VD VRTP A + +L H L G++ +TGI +D +++G V + NI
Sbjct: 7 VDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNI 66
Query: 111 GREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRH 170
R + L+AG ++ P TV C SS Q I + +G D+VVAGGV+ MS IPI
Sbjct: 67 ARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPI-- 124
Query: 171 SRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGE-TMGHSADRLAAAF 229
+ A T ++L F + + E + A+ +A +
Sbjct: 125 -----------SSAMTAGEQLGF-----TSPFAESKGWLHRYGDQEVSQFRGAELIAEKW 168
Query: 230 KVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRVSTPEQMAKLKP 288
+SR+E + +AL SH A A G + I+P VG T+ D G R ++ E+MA LKP
Sbjct: 169 GISREEMERFALESHRRAFAAIRAGRFDNEIVP--VGGVTV--DEGPRETSLEKMAGLKP 224
Query: 289 AFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLG 348
+ G +TAA +S ++DGASA ++ +E K+ GL P+A + DP +L
Sbjct: 225 --LVEGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPV-FMLTA 281
Query: 349 PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDL 408
P AT LE+ GLS+ DID E++EAFA +LA LK + D
Sbjct: 282 PIPATRYALEKTGLSIDDIDVVEINEAFAPVVLAWLKETGA-----------------DP 324
Query: 409 NKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465
K N GG++++GHP ATG +L + L R G++GL C GG IIER
Sbjct: 325 AKVNPNGGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTANVTIIER 381
|
Length = 382 |
| >gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (538), Expect = 8e-64
Identities = 137/434 (31%), Positives = 213/434 (49%), Gaps = 62/434 (14%)
Query: 50 VFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSN 109
V V RTPF G ++ A EL ++ L++ +S + ++ ++ GTV+Q +
Sbjct: 5 VIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQI 64
Query: 110 IGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP-- 167
R+AA +AG + TV C S + +T +I AG V+VAGG+E MS+ P
Sbjct: 65 PSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYI 124
Query: 168 IRHSR--------KMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMG 219
+ +R ++ L++ AD L FS G MG
Sbjct: 125 LPGARWGYRMGDNEVIDLMV--------ADGL-----------------TCAFS-GVHMG 158
Query: 220 HSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDK-----TISKDN 273
+A +SR+ QDE+A RSH A A E+G + I+P+ + + ++KD
Sbjct: 159 VYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDE 218
Query: 274 GVRVST-PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLR 332
R T E++AKLKP F G++TA N+ + DGA+A V+M+E +AKQ G KP A +
Sbjct: 219 APRKDTTIEKLAKLKPVF-DKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATIL 277
Query: 333 DFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWF 392
++ + KD P YA +LE+ G ++ DID +E++EAFA LA
Sbjct: 278 AHTAIAVEAKD-FPRTPGYAINALLEKTGKTVEDIDLFEINEAFAAVALA---------- 326
Query: 393 AKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAAC 452
S+++ D K N GG++++GHP A+G R+ V + L R G G+ A C
Sbjct: 327 -------STEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAIC 379
Query: 453 AAGGQGVGMIIERH 466
+ GGQG ++IE H
Sbjct: 380 SGGGQGDAVLIEVH 393
|
Length = 393 |
| >gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 208 bits (532), Expect = 6e-63
Identities = 138/438 (31%), Positives = 211/438 (48%), Gaps = 66/438 (15%)
Query: 47 KNIVFVDGVRTPF--LLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQE 104
+ V V G RTP G+ + +L + L++ G + ID ++ G + E
Sbjct: 2 REAVIVAGARTPVGKAKKGS-LKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPE 60
Query: 105 VKTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
+ N+ R AG PA T+ C S Q I G I G + V+AGG E M
Sbjct: 61 AEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESM 120
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
S +P M ++R N L P++++ MGH+A+
Sbjct: 121 SLVP------MMGHVVRPNPR---------LVEAAPEYYM-------------GMGHTAE 152
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV-----GD--------KTI 269
++A + +SR++QD +A+RSH A +A +G D I+P+ V G+ T
Sbjct: 153 QVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITF 212
Query: 270 SKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPK 328
S+D GVR +T E + KL+PAF GSVTA NSS ++DGA+A ++M KA+ GLKP
Sbjct: 213 SQDEGVRADTTLEILGKLRPAF-NVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPL 271
Query: 329 AYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMD 388
A R F V+ P + + +GP A P+ L+ AGL LSDI +E++EAFA Q + ++ +
Sbjct: 272 AKFRSFA-VAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELG 330
Query: 389 SEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGL 448
D K N GG++++GHP TG +LT+ + + R + QFG+
Sbjct: 331 L-----------------DEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGI 373
Query: 449 IAACAAGGQGVGMIIERH 466
+ C GG G + E
Sbjct: 374 VTMCIGGGMGAAGVFELL 391
|
Length = 391 |
| >gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 209 bits (533), Expect = 7e-63
Identities = 130/377 (34%), Positives = 194/377 (51%), Gaps = 57/377 (15%)
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
N+ R A+ G+ D P TV C SS Q I AG DV ++ GVE +S
Sbjct: 66 FNMARVVAVLLGY-DFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFA 124
Query: 168 IRHSRKM---RSLLLRANKAKT-------------PADRLKLLATIRPDFFIPELPAVAE 211
+S + ++ L +A+T P + L PD +I
Sbjct: 125 KGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLL-----PDVYI-------- 171
Query: 212 FSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYL-TDILPIQVGDKT-I 269
MG +A+ +A +SR+EQDE+ +RS A++A G+ +I P+ + D T +
Sbjct: 172 -----AMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVV 226
Query: 270 SKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPK 328
S D+G R +T E++++LKP F +P G+VTA N+ L DGA+A VIM++ KA++LGL P
Sbjct: 227 STDDGPRAGTTYEKVSQLKPVF-RPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPL 285
Query: 329 AYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMD 388
A + VS + + LGP A+ Q L RAG+S+ DID E++EAFA Q+L + + +
Sbjct: 286 ARIVS-TGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSAREL- 343
Query: 389 SEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGL 448
G+ D +K N GG++++GHPF TG R+T N L D FGL
Sbjct: 344 ---------------GI-DEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGL 387
Query: 449 IAACAAGGQGVGMIIER 465
C GGQG+ M++ER
Sbjct: 388 ETMCVGGGQGMAMVLER 404
|
Length = 406 |
| >gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Score = 204 bits (522), Expect = 3e-61
Identities = 132/425 (31%), Positives = 214/425 (50%), Gaps = 42/425 (9%)
Query: 52 VDGVRTPFLLSGTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQEVKTS-N 109
D +RTP G +++ A +L L ++ + G+ + +D ++YG Q + + N
Sbjct: 7 CDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRN 66
Query: 110 IGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIR 169
+ R +AL AG P T+ C S + T I AG ++++AGGVE MS P
Sbjct: 67 VARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAP-- 124
Query: 170 HSRKMRSLLLRANKAKTPADR-LKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAA 228
KA + R ++ T F+ P + ++M +A+ +A
Sbjct: 125 ---------FVMGKADSAFSRQAEIFDTTIGWRFVN--PLMKAQYGVDSMPETAENVAED 173
Query: 229 FKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDK-----TISKDNGVRVST-PE 281
+ +SR +QD +ALRS A AQ G+L + I+P+ + K + +D R T E
Sbjct: 174 YNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLE 233
Query: 282 QMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDP 341
+AKLKP F +P G+VTA N+S + DGA+A ++ +EA AK+ GL P+A + +P
Sbjct: 234 ALAKLKPVF-RPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEP 292
Query: 342 KDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSS 401
+ + +GPA AT ++L R GL++ D E++EAFA Q LA L+ +
Sbjct: 293 R-IMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQL-------------- 337
Query: 402 KVGVPDLNKF-NNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVG 460
G+ D + N GG++++GHP +G RL + A ++L R G++ L C GQG+
Sbjct: 338 --GLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERTGGRYALCTMCIGVGQGIA 395
Query: 461 MIIER 465
+ IER
Sbjct: 396 LAIER 400
|
Length = 401 |
| >gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 201 bits (512), Expect = 5e-60
Identities = 136/434 (31%), Positives = 206/434 (47%), Gaps = 67/434 (15%)
Query: 50 VFVDGVRTPFLLSGTDYANMM-AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT- 107
V V RTP S NM L H + +++ + ++ ++ G E T
Sbjct: 5 VIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATG 64
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
+NI R+ AL AG P TV C S Q I + AG DV VAGGVE +S +
Sbjct: 65 ANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQ 124
Query: 168 IRHSRKM-RSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
+R M R L +K P+ + M +A+ +A
Sbjct: 125 NEMNRHMLREGWLVEHK---------------PEIYWS-------------MLQTAENVA 156
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQ----VGDK----------TISK 271
+ +S++ QDEY ++S A AQ G D I+PI V DK T+S
Sbjct: 157 KRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSA 216
Query: 272 DNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY 330
D G+R +T E ++K++ A P G +TA N+S +DGASACV+M A++ GL+P
Sbjct: 217 DEGIRPDTTLEGVSKIRSAL--PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGI 274
Query: 331 LRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSE 390
R F +P D++ +GP +A P++L++AGL + DID WE++EAFA Q+L
Sbjct: 275 FRGFAVAGCEP-DEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQVL--------- 324
Query: 391 WFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIA 450
Y +G+P ++ N GG++++GHP+ +G RLT HA R ++ ++
Sbjct: 325 -----YC--RDTLGIPM-DRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRRGAKYVVVT 376
Query: 451 ACAAGGQGVGMIIE 464
C GGQG + E
Sbjct: 377 MCIGGGQGAAGLFE 390
|
Length = 392 |
| >gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 200 bits (510), Expect = 1e-59
Identities = 134/423 (31%), Positives = 211/423 (49%), Gaps = 39/423 (9%)
Query: 52 VDGVRTPFLLSGTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQEVKTS-N 109
D +RTP G +++ A +L L ++++ + ID ++YG Q + + N
Sbjct: 7 CDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRN 66
Query: 110 IGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIR 169
+ R + L AG P T+ C S + I +G +++AGGVE MS P
Sbjct: 67 VARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFV 126
Query: 170 HSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAF 229
+ + +A T TI F P + + S M +A+ +A +
Sbjct: 127 MGKAESAFSRQAEIFDT---------TIGWRFVNPLMKQLYGVDS---MPETAENVATDY 174
Query: 230 KVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQV----GD-KTISKDNGVRVSTPEQM 283
VSR +QD +ALRS A +AQ G L +I+P+ + GD +S+D R +T E +
Sbjct: 175 NVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEAL 234
Query: 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343
AKLK V+P G+VTA N+S + DGA A ++ +EA A++ GLKP+A + +P+
Sbjct: 235 AKLKGV-VRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPR- 292
Query: 344 QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
+ +GPA AT ++L R G++L D E++EAFA Q LA L+ +
Sbjct: 293 VMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLREL---------------- 336
Query: 404 GVPDLN-KFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMI 462
G+ D + + N GG++++GHP A+G RL A +L R G+F L C GQG+ +
Sbjct: 337 GLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERTGGRFALCTMCIGVGQGIAIA 396
Query: 463 IER 465
IER
Sbjct: 397 IER 399
|
Length = 400 |
| >gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 7e-58
Identities = 142/459 (30%), Positives = 209/459 (45%), Gaps = 72/459 (15%)
Query: 27 SICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGT-DYANMMAHELARHSLIGILQK 85
S C + + S G ++V V RTP + + + +L L +++K
Sbjct: 28 SACAAGD--SAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEK 85
Query: 86 TGISKDLIDYIVYGTVIQE-VKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGI 144
TG++ + IV GTV+ + +N R AA AGF + P TV C S Q +
Sbjct: 86 TGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 145
Query: 145 GLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204
I AG YD+ + GVE M+ P+ +
Sbjct: 146 AAIKAGFYDIGIGAGVESMTTNPMAWEGGVN----------------------------- 176
Query: 205 ELPAVAEFSSGET----MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-I 259
P V FS + MG +++ +A F V+R+EQD+ A+ SH A A G D I
Sbjct: 177 --PRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEI 234
Query: 260 LPIQ---VGDKT-------ISKDNGVRVSTP-EQMAKLKPAFVKPHGSVTAANSSFLTDG 308
+P+ V KT IS D+G+R +T +AKLKP F K +G+ TA NSS ++DG
Sbjct: 235 VPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVF-KKNGTTTAGNSSQVSDG 293
Query: 309 ASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDID 368
A A ++M + A Q GL R F V DP + +GPA A P ++ AGL L DID
Sbjct: 294 AGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPA-VMGIGPAVAIPAAVKAAGLELDDID 352
Query: 369 AWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATG 428
+E++EAFA Q + K K+G+ D K N GG++++GHP ATG
Sbjct: 353 LFEINEAFASQFVYCCK----------------KLGL-DPEKVNVNGGAIALGHPLGATG 395
Query: 429 VRLTVHAANRLVRE--DGQFGLIAACAAGGQGVGMIIER 465
R + + R D +FG+++ C G G + ER
Sbjct: 396 ARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFER 434
|
Length = 452 |
| >gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 193 bits (492), Expect = 7e-57
Identities = 133/444 (29%), Positives = 203/444 (45%), Gaps = 81/444 (18%)
Query: 53 DGVRTPFLLSGTDYANMMAHE-----LARHSLIGILQKTGISKDLIDYIVYGTVIQEV-- 105
D VRTP G + HE LA L + + G+ +D +V G V V
Sbjct: 8 DAVRTP---RGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTP-VGD 63
Query: 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
+ ++I R A L+AG + P + C S + + + +G D+V+AGGVE MS
Sbjct: 64 QGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSR 123
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225
+P+ ++ D +T P +F+P+ G SAD +
Sbjct: 124 VPMG-----------SDGGAWAMDP----STNFPTYFVPQ-------------GISADLI 155
Query: 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPI--QVGDKTISKDNGVRV-STPE 281
A + SR++ D YA+ S A A +GY ++P+ Q G + D +R +T E
Sbjct: 156 ATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTME 215
Query: 282 QMAKLKPAFVKP-------------HGSV-------TAANSSFLTDGASACVIMTEAKAK 321
+AKLKP+F + V A NSS + DGA+A +I +E K
Sbjct: 216 SLAKLKPSFAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGK 275
Query: 322 QLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQIL 381
LGLKP+A + + DP +L GP AT + L +AGL++ DID +E++EAFA +L
Sbjct: 276 ALGLKPRARIVATATIGSDPT-IMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVL 334
Query: 382 ANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVR 441
++A+D +P +K N GG++++GHP ATG + + L R
Sbjct: 335 RFMQALD----------------IPH-DKVNVNGGAIAMGHPLGATGAMILGTVLDELER 377
Query: 442 EDGQFGLIAACAAGGQGVGMIIER 465
+ LI C GG G+ IIER
Sbjct: 378 RGKRTALITLCVGGGMGIATIIER 401
|
Length = 402 |
| >gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 191 bits (486), Expect = 5e-56
Identities = 137/422 (32%), Positives = 216/422 (51%), Gaps = 39/422 (9%)
Query: 53 DGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTS-NIG 111
DG+R+PF A++ +LA + +L+K+G D I+ ++ G Q + S N+
Sbjct: 8 DGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVA 67
Query: 112 REAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHS 171
R A L AG P TV C S + I G D+ +AGGVE MS P
Sbjct: 68 RNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPF--- 124
Query: 172 RKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKV 231
++ +A A + ++ TI F P++ VA++ ++M + D +AA F +
Sbjct: 125 -----VMGKAESAFSRDAKV-FDTTIGARFPNPKI--VAQYG-NDSMPETGDNVAAEFGI 175
Query: 232 SRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV------GDKTISKDNGVRV-STPEQM 283
SR++ D +A +S Q A+E+G+ D I PI+V K +++D R ST E +
Sbjct: 176 SREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEAL 235
Query: 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343
KLKP F G VTA N+S + DGA+A +I + A ++ GLKP A + +P+
Sbjct: 236 TKLKPLFEG--GVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPR- 292
Query: 344 QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
+ +GP A + L RAGL+L D+D E++EAFA Q+L LK + ++
Sbjct: 293 IMGIGPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDF------------ 340
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMII 463
D + N GG++++GHP A+G RL + AA L R ++ +++ C GQG+ M+I
Sbjct: 341 ---DDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRGKRYAVVSLCIGVGQGLAMVI 397
Query: 464 ER 465
ER
Sbjct: 398 ER 399
|
Length = 401 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 2e-55
Identities = 133/436 (30%), Positives = 196/436 (44%), Gaps = 70/436 (16%)
Query: 52 VDGVRTPFLLSGTDYANMMAH----ELARHSLIGIL-QKTGISKDLIDYIVYGTVIQEVK 106
V RTP G M + +L H L + Q G+ LI+ + G + E +
Sbjct: 11 VAATRTPV---GKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAE 67
Query: 107 TS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
N+ R AL AG + TV C S Q + I G DV++A GVE MS
Sbjct: 68 QGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSM 127
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225
+P+ NK ++ P F + MG +A+++
Sbjct: 128 VPMM-----------GNKP-----------SMSPAIFARD----ENVGIAYGMGLTAEKV 161
Query: 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGD--------------KTIS 270
A +KVSR++QD +AL SH A AQ+ G D I P ++ + +T+
Sbjct: 162 AEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVD 221
Query: 271 KDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKA 329
D G R ++ E +AKLKP F GSVTA NSS +DGA A ++++E KQ L P A
Sbjct: 222 LDEGPRADTSLEGLAKLKPVF-ANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLA 280
Query: 330 YLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDS 389
F V+ P + + +GP A P L++AGL D+D E++EAFA Q LA ++ +
Sbjct: 281 RFVSFA-VAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGL 339
Query: 390 EWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449
D +K N GG++++GHP ATG T + L R + ++G++
Sbjct: 340 -----------------DPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRTNLKYGMV 382
Query: 450 AACAAGGQGVGMIIER 465
C G G I ER
Sbjct: 383 TMCVGTGMGAAGIFER 398
|
Length = 399 |
| >gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain | Back alignment and domain information |
|---|
Score = 168 bits (429), Expect = 4e-51
Identities = 58/141 (41%), Positives = 81/141 (57%), Gaps = 18/141 (12%)
Query: 325 LKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANL 384
LKP A +R + V DP + +GPAYA P+ L++AGL+++DID +E++EAFA Q LA
Sbjct: 1 LKPLARIRSYATVGVDP-AIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVA 59
Query: 385 KAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDG 444
K + D K N GG++++GHP A+G R+ V + L R G
Sbjct: 60 KDLGI-----------------DPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGG 102
Query: 445 QFGLIAACAAGGQGVGMIIER 465
++GL C GGQGV MIIER
Sbjct: 103 KYGLATLCIGGGQGVAMIIER 123
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 123 |
| >gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 176 bits (448), Expect = 1e-50
Identities = 138/426 (32%), Positives = 207/426 (48%), Gaps = 42/426 (9%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
+++V V RT AN+ A EL + +L++TG+ +D ++ G V+
Sbjct: 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA 61
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N R+AA+ AG PA T+ C S + + I G +V++AGG E MS
Sbjct: 62 GQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLA 121
Query: 167 PIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
P +L + +L+ ++ D + + + MG +A+ L
Sbjct: 122 P---------YVLPGARTGLRMGHAQLVDSMITD-------GLWDAFNDYHMGITAENLV 165
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GD-KTISKDNGVRV-ST 279
+ +SR+ QD +A S A A E G D I PI + G+ + D R +T
Sbjct: 166 EKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTT 225
Query: 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ 339
E +AKLKPAF K GSVTA N+S L DGA+A ++M+ AKAK LGL A + +
Sbjct: 226 AESLAKLKPAF-KKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV 284
Query: 340 DPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGR 399
DP + +GP AT + L++AG SL+++D E +EAFA Q LA K + W
Sbjct: 285 DPA-IMGIGPVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKEL--GW-------- 333
Query: 400 SSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGV 459
D K N GG++++GHP A+G R+ V + ++R D + GL C GGQGV
Sbjct: 334 -------DAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDAKKGLATLCIGGGQGV 386
Query: 460 GMIIER 465
+ IER
Sbjct: 387 ALAIER 392
|
Length = 393 |
| >gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 3e-50
Identities = 117/422 (27%), Positives = 198/422 (46%), Gaps = 47/422 (11%)
Query: 52 VDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQE-VKTSNI 110
V RT G A +LA L ++ ++G LI+ ++ G V Q + +N+
Sbjct: 7 VAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNV 66
Query: 111 GREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRH 170
R A L++ + P ++ C SS Q + + +G D+V+A GVE M+ +P+
Sbjct: 67 ARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGS 126
Query: 171 SRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFK 230
+L + + ++ P + +FS + G A+ +A +
Sbjct: 127 PS---TLPAKNGLGHYKSPGME-----------ERYPGI-QFS--QFTG--AEMMAKKYG 167
Query: 231 VSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISK-DNGVRV-STPEQM 283
+S+ + DE+AL+SH A A + G I+P+++ G + D G+R +T E +
Sbjct: 168 LSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGI 227
Query: 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343
A +K + G +TAA +S + DGAS +++ E K LG+KP A + + DP
Sbjct: 228 AGVKL--IAEGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPV- 284
Query: 344 QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
+L P AT + L++AG+ + DID +EV+EAFA LA LKA +
Sbjct: 285 IMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGA-------------- 330
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMII 463
D + N GG++++GHP A+G +L + L + ++GL C GG I+
Sbjct: 331 ---DPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQRGKRYGLQTMCEGGGMANVTIV 387
Query: 464 ER 465
ER
Sbjct: 388 ER 389
|
Length = 390 |
| >gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 171 bits (434), Expect = 1e-48
Identities = 126/421 (29%), Positives = 201/421 (47%), Gaps = 39/421 (9%)
Query: 49 IVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTS 108
IV RTP ++A++ A +L ++ +++ G+ + ID +V G V+ +
Sbjct: 9 IVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQ 68
Query: 109 NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPI 168
R+AAL AG TV C S + ++ AG+ DV+VAGG+E M++ P
Sbjct: 69 APARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPY 128
Query: 169 RHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAA 228
LL +A + F+ L + G MG A+ A
Sbjct: 129 --------LLPKARGGMRMGH-----GQVLDHMFLDGLEDA--YDKGRLMGTFAEECAGE 173
Query: 229 FKVSRKEQDEYALRSHTLAQQAQEKG-YLTDILPIQV----GDKTISKDNGVRVSTPEQM 283
+ +R+ QD +A+ S A++A E G + +I P+ V GD I +D + PE++
Sbjct: 174 YGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKI 233
Query: 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343
LKPAF K G+VTAANSS ++DGA+A V+M + AK+LGL P A + +Q P
Sbjct: 234 PTLKPAFSK-TGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPS- 291
Query: 344 QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
+ P A ++ E+ G +++D +E++EAFA +A +K +
Sbjct: 292 KFTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMK----------------EH 335
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMII 463
G+P K N GG+ ++GHP A+G R+ V L G+ G+ + C GG+ M I
Sbjct: 336 GLPH-EKVNVNGGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEATAMGI 394
Query: 464 E 464
E
Sbjct: 395 E 395
|
Length = 397 |
| >gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 1e-48
Identities = 131/424 (30%), Positives = 204/424 (48%), Gaps = 42/424 (9%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
K + RT F + A LA H + ILQ + I L++ ++ G VI
Sbjct: 3 KPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS 62
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N R+ + AG + P +T+ C S + + I G ++V+AGG E MS
Sbjct: 63 GQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMS-- 120
Query: 167 PIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
M +RA +K++ ++ D + + SG MG +A+ ++
Sbjct: 121 -----LGMHGSYIRAG---AKFGDIKMVDLMQYD-------GLTDVFSGVFMGITAENIS 165
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISK----DNGVRVSTP- 280
F +SR+EQDE+AL SH A +AQ G D ILPI+V K + D VR T
Sbjct: 166 KQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSL 225
Query: 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQD 340
E ++KL+PAF K +G VTA N+S + DGA+ ++++E K+ L P A + + D
Sbjct: 226 EILSKLRPAFDK-NGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVD 284
Query: 341 PKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRS 400
P + P A+ + L +AG S++D++ EV+EAFA Q + Y+ R
Sbjct: 285 PS-IMGTAPVPASQKALSKAGWSVNDLEVIEVNEAFAAQSI--------------YVNRE 329
Query: 401 SKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVG 460
K D+ K N GG+++IGHP A+G R+ + + L R + GL+ C GG G+
Sbjct: 330 MKW---DMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRAKAKKGLVTLCIGGGMGMA 386
Query: 461 MIIE 464
M +E
Sbjct: 387 MCVE 390
|
Length = 392 |
| >gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 3e-46
Identities = 124/421 (29%), Positives = 195/421 (46%), Gaps = 40/421 (9%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
K++ V RT G ++ + A +L ++ ++ + L+ ++ G VIQ
Sbjct: 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N +AA AG +TV + C S + + I G D+V+AGG+E MS+
Sbjct: 62 GQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNA 121
Query: 167 PIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
P LL ++ P L I + L F E MG SA+R A
Sbjct: 122 P---------FLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYF---EHMGVSAERTA 169
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRVSTPEQMAK 285
+ ++R+ DEY+++S+ A +A E G + I+P + +D G+R +T E +AK
Sbjct: 170 RKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFN----DLDRDEGIRKTTMEDLAK 225
Query: 286 LKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQL 345
L PAF K +G +TA NS+ L+DG SA V+ +E + GLKP A + + S DP D
Sbjct: 226 LPPAFDK-NGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLD-F 283
Query: 346 LLGPAYATPQVLERAGLSLSDIDAWEVHEAF--AGQILANLKAMDSEWFAKNYMGRSSKV 403
+ P AT ++LE+ S+ D E +EAF A I+ + +D+E
Sbjct: 284 VEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNE------------- 330
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMII 463
+FN GG+++IGHP +G R+ V N L + GL C GG + +
Sbjct: 331 ------RFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHMKTGLATLCHGGGGAHTLTL 384
Query: 464 E 464
E
Sbjct: 385 E 385
|
Length = 388 |
| >gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 156 bits (395), Expect = 3e-43
Identities = 121/422 (28%), Positives = 191/422 (45%), Gaps = 70/422 (16%)
Query: 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT 107
V V+ RTP + +LA L+ L K G+ ++ ID ++ G V+
Sbjct: 2 RAVIVEAKRTPIGKKNGMLKDYEVQQLAA-PLLTFLSK-GMERE-IDDVILGNVVG--PG 56
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
N+ R +AL AG P T+ C + + I T I GA +AGGVE S P
Sbjct: 57 GNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP 116
Query: 168 IRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL---PAVAEFSSGETMGHSADR 224
+ N+A+ F PE P MG +A+
Sbjct: 117 FQ------------NRAR----------------FSPETIGDPD---------MGVAAEY 139
Query: 225 LAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQ-VGDKTISKDNGVRVSTPEQ 282
+A + ++R+ QDEYA S+ QA EKGY+ + IL + D++I K+
Sbjct: 140 VAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYE----RI 195
Query: 283 MAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK 342
+ + KPAF+ +G+VTA NS + DGA A ++M E +A++LG KP V DP
Sbjct: 196 IKRTKPAFLH-NGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPN 254
Query: 343 DQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSK 402
GP +A ++L + + DID +E++EAFA +++A K +
Sbjct: 255 LP-GTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKEL--------------- 298
Query: 403 VGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMI 462
+P K N GG++++GHP+ A+G L + RED ++G+ GG G+ ++
Sbjct: 299 -QIP-YEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKREDMKYGIATLGIGGGIGLALL 356
Query: 463 IE 464
E
Sbjct: 357 FE 358
|
Length = 361 |
| >gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 2e-39
Identities = 124/450 (27%), Positives = 194/450 (43%), Gaps = 76/450 (16%)
Query: 52 VDGVRTPFLLSGTD---YANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTS 108
+D VRTP + A++ LA L + ++ G++ +D I++ T Q K
Sbjct: 7 IDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQG 66
Query: 109 -NIGREAALSAGFSDKTPAHTVTMACISSNQGITT---GIGLIAAGAYDVVVAGGVEFMS 164
++GR AAL AG+ K T+ C GIT+ I +G D+V+AGG E MS
Sbjct: 67 GDLGRMAALDAGYDIKASGVTLDRFCGG---GITSVNLAAAQIMSGMEDLVIAGGTEMMS 123
Query: 165 DIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADR 224
+ M A P + G D
Sbjct: 124 YTAAMAAEDMA-------------------AGKPPLGMGSGNLRLRALHPQSHQGVCGDA 164
Query: 225 LAAAFKVSRKEQDEYALRSHTLAQQAQEKG-YLTDILPIQVGDKTISKDNGV---RVSTP 280
+A ++R+ D L S A +A ++G + ++P+ D +++ D+ +T
Sbjct: 165 IATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTA 224
Query: 281 EQMAKLKPAF---------------------VKPHGSVT----AANSSFLTDGASACVIM 315
E +A LKPAF P + A NSS + DGA+A ++
Sbjct: 225 EGLAALKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLA 284
Query: 316 TEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEA 375
++A A++ GLKP+A + + DP +L P A +VL +AGL+ DID WE++EA
Sbjct: 285 SKAYAEKHGLKPRARIVAMANMGDDPT-LMLNAPVPAAKKVLAKAGLTKDDIDLWEINEA 343
Query: 376 FAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHA 435
FA A+ ++ R + D +K N GG++++GHP ATG L
Sbjct: 344 FA-------------VVAEKFI-RDLDL---DRDKVNVNGGAIALGHPIGATGSILIGTV 386
Query: 436 ANRLVREDGQFGLIAACAAGGQGVGMIIER 465
+ L R + GL+ CAAGG +IIER
Sbjct: 387 LDELERRGLKRGLVTMCAAGGMAPAIIIER 416
|
Length = 417 |
| >gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 6e-32
Identities = 108/425 (25%), Positives = 175/425 (41%), Gaps = 76/425 (17%)
Query: 66 YANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125
AN +AHE ++ L+ G++ ++ G V+ + N ++AA+ AG + P
Sbjct: 18 DANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAP 77
Query: 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAK 185
A + C S + + + LIA G + ++AGG E M + ++ K + + + NK
Sbjct: 78 AIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKM-ETSAENNAKEKHIDVLINKYG 136
Query: 186 TPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHT 245
R D +AL
Sbjct: 137 ----------------------------------------------MRACPDAFALAGQA 150
Query: 246 LAQQAQEKGYLTD-ILPIQV----GDKTISKDNGVR---VSTPEQMAKLKPAFVKPHGSV 297
A+ A++ G D V GD D ++ ++ +++AKL+PAF K +
Sbjct: 151 GAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDK-EDFL 209
Query: 298 TAANSSFLTDGASACVIMTEAKAKQLGLKPKA-------YLRDFVYVSQDPKDQLLLG-- 348
TA N+ L DGA+A ++M+EA+A++ GL+ KA + D +D K ++G
Sbjct: 210 TAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGD 269
Query: 349 -PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPD 407
P A + LE+AGL + D+D E H+AFA A +A+ + G G
Sbjct: 270 GPIEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALG--LCPEGQGGALVDRGDNT 327
Query: 408 LNK---FNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQF-----GLIAACAAGGQGV 459
N GG+++IGHP A+G + L E G+ GL C GG G
Sbjct: 328 YGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGA 387
Query: 460 GMIIE 464
M IE
Sbjct: 388 AMCIE 392
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 31/96 (32%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 72 HELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM 131
ELA + L G+ ID +V G S G A G K PA V
Sbjct: 17 LELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGK-PATRVEA 75
Query: 132 ACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
A S + + IA+G DVV+ G E MSD+P
Sbjct: 76 AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVP 111
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 3e-10
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 306 TDGASACVIMTEAKAKQLGLKPKAYLR------DFVYVSQDPKDQLLLGPAYATPQVLER 359
+DGA+A V+ +E +A++L +P ++ D +S+ L A + +
Sbjct: 205 SDGAAAVVLASEERARELTDRP-VWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKM 263
Query: 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV---GVPDLN---KFNN 413
AG++ DID E+++ F L L+ + F + G K+ G + N
Sbjct: 264 AGITPDDIDVAELYDCFTIAELLALEDLG---FCEK--GEGGKLVREGDTAIGGDLPVNT 318
Query: 414 WGGSLSIGHPFAATGVRLTVHAANRLVREDGQ-----FGLIAACAAGGQGVG 460
GG LS GHP ATG+ V A +L E G + A GG G
Sbjct: 319 SGGLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARVGLAHNIGGTGSA 370
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 8e-10
Identities = 37/176 (21%), Positives = 58/176 (32%), Gaps = 26/176 (14%)
Query: 299 AANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLL---GPAYATPQ 355
+ DGA+A V+ +E A + G P+A + + G A A +
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 356 VLERAGLSLSDIDAWEVHEAFAGQILA-NLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW 414
LE AGL+ SDID E H A L V P ++
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDP----------DGVRSPAVS----- 198
Query: 415 GGSLSIGHPFAATGVRLTV-------HAANRLVREDGQFGLIAACAAGGQGVGMII 463
+ GHP A G+ + H + + L+ GG +++
Sbjct: 199 ATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 6e-09
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 73 ELARHSLIGILQKTGISKDLIDYIVYGTVI--QEVKTSNIGREAALSAGFSDKTPAHTVT 130
+LA + + L+ GI ID + G + V +I A AG + PA V
Sbjct: 24 DLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPI-PATRVE 82
Query: 131 MACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
AC S + +A+G DVV+A GVE M+D+P
Sbjct: 83 AACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVP 119
|
Length = 389 |
| >gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 8e-08
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 302 SSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS-----QDPKDQLLLGPA-YATPQ 355
S +TDGA+A ++ +E KAK+ P +++ S D KD L A A +
Sbjct: 208 CSPITDGAAAVILASEEKAKEYTDTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEK 266
Query: 356 VLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMG----RSSKVGVPDLNKF 411
+ AG+ DID EVH+ F +A + A + FAK G R + +
Sbjct: 267 AYKMAGIEPKDIDVAEVHDCFT---IAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPV 323
Query: 412 NNWGGSLSIGHPFAATGVRLTVHAANRLVRE 442
N GG + GHP ATGV V +L E
Sbjct: 324 NPSGGLKAKGHPVGATGVSQAVEIVWQLRGE 354
|
Length = 389 |
| >gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 6e-07
Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 30/170 (17%)
Query: 303 SFLTDGASACVIMTEAKAKQL----GLKPKAYLRDFVYVSQDPKDQLLL-GPAYATPQVL 357
S ++DGA+A V+ A+ L + +A++ DF+ +S+ +D L GP A + L
Sbjct: 213 SLVSDGAAALVLADAETARALQRAVRFRARAHVNDFLPLSR--RDPLAFEGPRRAWQRAL 270
Query: 358 ERAGLSLSDIDAWEVHEAFAGQILANLKAM------------DSEWFAKNYMGRSSKVGV 405
+AG++L D+ E H+ F L +AM W AK+ G+ +
Sbjct: 271 AQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKD--GK-----L 323
Query: 406 PDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAG 455
P N GG + GHP ATGV + V AA +L E G + A AG
Sbjct: 324 P----VNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEAGGMQIPGAKLAG 369
|
Length = 389 |
| >gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 303 SFLTDGASACVIMTEAKAKQLGLKP--------KAYLRDFVYVSQDPKDQLLLGPAYATP 354
S ++DG + V+ +E +++GL P K+ + +DP D + + A
Sbjct: 256 SQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAA 315
Query: 355 Q-VLERAGLSLSDIDAWEVHEAFA-GQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFN 412
Q L AG+ SD+ EVH+ F ++L +E+ + R+ + N
Sbjct: 316 QKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVN 375
Query: 413 NWGGSLSIGHPFAATGVR 430
GG LS GHP ATGV+
Sbjct: 376 TGGGLLSFGHPVGATGVK 393
|
Length = 438 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 47.1 bits (113), Expect = 1e-05
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 114 AALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
++ + P +TV+ AC S I LI G DVV+AGG E
Sbjct: 142 GQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAE 189
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 25/161 (15%)
Query: 301 NSSFLTDGASACVIMTEAKAKQLGL------KPKAYLRDFVYVSQDPKDQLLLGPAYATP 354
+S ++DG++ + +E K K+L + Y D+ YV++ + A
Sbjct: 205 DSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAAR 264
Query: 355 QVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMG----------RSSKVG 404
Q A ++ +DI+ VH+AF +A + + F + G + KVG
Sbjct: 265 QAYNMAKVTPNDIEVATVHDAFT---IAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVG 321
Query: 405 VPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQ 445
V N +GG + GHP ATG+ + +L E G+
Sbjct: 322 V------NLFGGLKAKGHPLGATGLSMIYEITKQLRDEAGK 356
|
Length = 385 |
| >gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 33/157 (21%)
Query: 303 SFLTDGASACVIMTEAKAKQLGLK-PKAYLRDF----VYVSQDPKDQLLLGPAYATPQV- 356
S +TDG + V+ ++A + P ++ + + + K G Y P V
Sbjct: 220 SQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVR 279
Query: 357 ------LERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMG--------RSSK 402
RAG+ L D+D +EVH+ F SE+ A +++G ++ +
Sbjct: 280 QAVLDAYRRAGVGLDDLDGFEVHDCFTP----------SEYLAIDHIGLTGPGESWKAIE 329
Query: 403 VGVPDLN---KFNNWGGSLSIGHPFAATGVRLTVHAA 436
G + N GG + GHP A+GVR+ + AA
Sbjct: 330 NGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAA 366
|
Length = 403 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 69 MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT 128
+ A EL + + G+SK I ++ GT + S + A G S PA++
Sbjct: 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYS 63
Query: 129 VTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
V AC + + + + G D+V+AGG E
Sbjct: 64 VNQACATGLTALALAVQQVQNGKADIVLAGGSE 96
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 3e-04
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMA 132
ELA S+ L G+S+ I+ +V G+ A +G + K P V
Sbjct: 23 ELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKVPLR-VEAM 81
Query: 133 CISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
C + T +A+G D+ +A GV+ M+++
Sbjct: 82 CATGLAASLTAYTAVASGLVDMAIAVGVDKMTEV 115
|
Length = 385 |
| >gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.001
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 38/147 (25%)
Query: 306 TDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ----------DPKDQL-LLG---PAY 351
T GA+A ++ +E A++ GL R V+Q D + + L+G
Sbjct: 214 TCGAAAAIVCSEEFARKHGLD-----RAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRA 268
Query: 352 ATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAM------DSEWFAKN----YMGRSS 401
A QV E+AG+ DID E+H+ F+ L +A+ ++E F + Y GR
Sbjct: 269 AAQQVYEQAGIGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGR-- 326
Query: 402 KVGVPDLNKFNNWGGSLSIGHPFAATG 428
V N GG LS GHP ATG
Sbjct: 327 -WVV------NPSGGLLSKGHPLGATG 346
|
Length = 391 |
| >gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 22/154 (14%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGT---------DYA---NMMAHELARHSLIGILQK 85
R S+ + K + V G TPF+ G+ D+ N EL ++ G L+
Sbjct: 3 RSSLTTQAAKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLEN 62
Query: 86 TGIS--KDLIDYIVYGTVIQEVKTS--NIGREAALSAGFSDKT------PAHTVTMACIS 135
TG+ L+D +V G + E+ +S ++G A S G S + PA V AC S
Sbjct: 63 TGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACAS 122
Query: 136 SNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIR 169
+ + + AG D+ + GVE + + R
Sbjct: 123 GGLAVQSAWEALLAGTSDIALVVGVEVQTTVSAR 156
|
Length = 438 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
K P +T AC + I + LI G DVV+AGG E
Sbjct: 152 KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAE 190
|
Length = 412 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 472 | |||
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 100.0 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 100.0 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 100.0 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 100.0 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 100.0 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 100.0 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 100.0 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 100.0 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 100.0 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1392|consensus | 465 | 100.0 | ||
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 100.0 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 100.0 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1390|consensus | 396 | 100.0 | ||
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 100.0 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06158 | 384 | thiolase; Provisional | 100.0 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 100.0 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 100.0 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1391|consensus | 396 | 100.0 | ||
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 100.0 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 100.0 | |
| KOG1389|consensus | 435 | 100.0 | ||
| PRK07855 | 386 | lipid-transfer protein; Provisional | 100.0 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 100.0 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| KOG1406|consensus | 408 | 100.0 | ||
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 100.0 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.97 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.96 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.96 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.96 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.96 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.96 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.96 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.95 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.95 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.95 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.94 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.94 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.94 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.94 | |
| KOG1394|consensus | 440 | 99.94 | ||
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.94 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.93 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.93 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.93 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.93 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.93 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.92 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.92 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.92 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.92 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.91 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.9 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.9 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.9 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.89 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.89 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.89 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.89 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.89 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.89 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.89 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.88 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.88 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.88 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.87 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.87 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.86 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.86 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.86 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.85 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 99.85 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.84 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.8 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.78 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.76 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.73 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.71 | |
| KOG1202|consensus | 2376 | 99.67 | ||
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.61 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.6 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.55 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.54 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.54 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.53 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.53 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.49 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.48 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 99.46 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.44 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.36 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 99.29 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 99.16 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 99.08 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 98.91 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 98.78 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.7 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 98.59 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 98.52 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 98.47 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 98.31 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 97.46 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 97.18 | |
| KOG1393|consensus | 462 | 97.1 | ||
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 93.3 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 90.35 | |
| PRK06158 | 384 | thiolase; Provisional | 90.1 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 89.91 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 88.46 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 87.59 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 87.43 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 86.54 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 86.47 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 86.1 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 84.7 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 84.07 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 83.74 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 83.12 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 82.83 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 82.72 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 82.62 | |
| PRK06840 | 339 | hypothetical protein; Validated | 82.02 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 81.84 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 81.12 |
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-70 Score=564.48 Aligned_cols=420 Identities=44% Similarity=0.710 Sum_probs=344.4
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
.++||||+++||||+++.+.+.+.++.+|+.+|++++|+++|+++++||.+++|++.+...++++++.++..+|++...|
T Consensus 4 ~~~v~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P 83 (428)
T PRK08963 4 GDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD 83 (428)
T ss_pred CCeEEEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCc
Confidence 34899999999999987667788999999999999999999999999999999987665555778888999999975699
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC-CCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP-DFFIP 204 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 204 (472)
+++|+++|+||+.|+..|++.|++|.+|++||+|+|+||+.|+.........+.........+........... ..+ +
T Consensus 84 ~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 162 (428)
T PRK08963 84 AYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLL-P 162 (428)
T ss_pred ceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhcc-c
Confidence 99999999999999999999999999999999999999988753211000000000000000000000000000 000 0
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec--cceeeccCCCcc-CCH
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG--DKTISKDNGVRV-STP 280 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~--~~~~~~de~~~~-~t~ 280 (472)
..|...++.....|++.+++|+++||+|||++++|+++||+||..|+++|+|+ |+.|+... ...++.||.+|+ +|+
T Consensus 163 ~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r~~~t~ 242 (428)
T PRK08963 163 VPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDSTL 242 (428)
T ss_pred cCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCCCCCCH
Confidence 01211222122469999999999999999999999999999999999999997 58888652 235888999986 899
Q ss_pred HHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHc
Q psy1213 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERA 360 (472)
Q Consensus 281 ~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~A 360 (472)
|+|++++|++..++|++|.+|||+++|||+|+||+|++.|++++.+|.+||.+++..+.+|...+..++..++++||++|
T Consensus 243 e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~a~~~al~~A 322 (428)
T PRK08963 243 EDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYATPLALERA 322 (428)
T ss_pred HHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHHHHHHHHHHc
Confidence 99999999984346889999999999999999999999999999999899999998765553224556788999999999
Q ss_pred CCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHh
Q psy1213 361 GLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLV 440 (472)
Q Consensus 361 gl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~ 440 (472)
|++++|||++|+||||++++++.+|+||...||++|.|....+|+++.++||++||++++|||+||||+++++|+++|||
T Consensus 323 Gl~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~~e~~~qLr 402 (428)
T PRK08963 323 GLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELR 402 (428)
T ss_pred CCCHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHHHh
Confidence 99999999999999999999999999953339999999888889996667999999999999999999999999999999
Q ss_pred hccCCcchhhhhccCcceeEEEEEeC
Q psy1213 441 REDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 441 ~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++++++||+++|++||+|.++|||++
T Consensus 403 g~~g~~gl~~~c~ggG~g~a~~ie~~ 428 (428)
T PRK08963 403 RRGGGLGLTTACAAGGLGAAMVLEVE 428 (428)
T ss_pred hcCCCEEEEEEccccChhhEEEEEeC
Confidence 99999999999999999999999974
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-70 Score=563.42 Aligned_cols=417 Identities=37% Similarity=0.587 Sum_probs=340.9
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
++++||||+++|||+++.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+....+++++.++..+|++.+.|
T Consensus 2 ~~~v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p 81 (426)
T PRK08170 2 ARPVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVP 81 (426)
T ss_pred CCcEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCce
Confidence 46899999999999986555557899999999999999999999999999999987754444578889999999964689
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++++++|+|++.++.+|+++|++|.+|++||+|+|+||+.|+.........+..+.+....+.+......+...+..+.
T Consensus 82 ~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (426)
T PRK08170 82 AWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPV 161 (426)
T ss_pred eeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccccc
Confidence 99999999999999999999999999999999999999987642111000000000000000000000000000010000
Q ss_pred ---cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceecc-ceeeccCCCcc-CCH
Q psy1213 206 ---LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGD-KTISKDNGVRV-STP 280 (472)
Q Consensus 206 ---~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~-~~~~~de~~~~-~t~ 280 (472)
.+....+.....|++.+++|+++||+|||++++|++++|+||..|.+.|+|++++|+...+ .++..||.+|+ +|.
T Consensus 162 ~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~r~~~t~ 241 (426)
T PRK08170 162 IGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGVRPDSSM 241 (426)
T ss_pred cccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCCCCCCCH
Confidence 0111111112479999999999999999999999999999999999999999888886311 47888999987 999
Q ss_pred HHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHc
Q psy1213 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERA 360 (472)
Q Consensus 281 ~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~A 360 (472)
|+|++++|++..|.+++|.+|||+++|||+|+||+|+|.|++++.+|.++|.+++....+|.. +..+++.|+++||++|
T Consensus 242 e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~-~~~~~~~a~~~al~~a 320 (426)
T PRK08170 242 EKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQ-MGLGPVHAATPLLQRH 320 (426)
T ss_pred HHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchh-hcccHHHHHHHHHHHc
Confidence 999999999844778899999999999999999999999999999898899999887766653 4567889999999999
Q ss_pred CCCcCCcCEEEccCcchHHHHHHH---HhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHH
Q psy1213 361 GLSLSDIDAWEVHEAFAGQILANL---KAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 361 gl~~~dId~~e~hd~f~~~~~~~~---ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~ 437 (472)
||+++|||++|+||+|++++++.+ |++| ||++|+|....+|+++..+||++||++++|||+||||+++++++++
T Consensus 321 Gl~~~did~~ei~daFa~~~l~~l~~le~lG---f~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~~~~~~l~~ 397 (426)
T PRK08170 321 GLTLEDLDLWEINEAFAAQVLACLAAWADEE---YCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLH 397 (426)
T ss_pred CCCHHHcCEEEecchhHHHHHHHHHHhcccc---chhcccccccccCCCCcceecCCCCHHHhCCCccCccHHHHHHHHH
Confidence 999999999999999999999544 6888 9999998777778888788999999999999999999999999999
Q ss_pred HHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 438 RLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 438 qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|||+..+++||+++|++||+|.++|||+.
T Consensus 398 ~l~~~~~~~g~~~~c~~gg~g~a~~~e~~ 426 (426)
T PRK08170 398 ALKRRGTKRGIAAICIGGGQGGAMLLERV 426 (426)
T ss_pred HHHhhCCCeEEEEEecCCChhheEEEEeC
Confidence 99999999999999999999999999984
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-69 Score=558.06 Aligned_cols=413 Identities=38% Similarity=0.592 Sum_probs=330.9
Q ss_pred cCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~ 124 (472)
+|++||||+++||||+++.+.+.+.++.+|+.+|++++|+++|+++++||.+++|++.+...+.++++.++...|++...
T Consensus 5 ~m~~V~Ivg~~rTpfg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~ 84 (427)
T PRK09268 5 TVRRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYT 84 (427)
T ss_pred CCCCEEEEecCcCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCC
Confidence 45689999999999998766677899999999999999999999999999999998776443467889988888886568
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+||+.++.+|++.|++|.+|++||+|+|+||+.|+......+..+....+....+.++..+..+.+.++.+
T Consensus 85 p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (427)
T PRK09268 85 PAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAP 164 (427)
T ss_pred ceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccccc
Confidence 99999999999999999999999999999999999999998875321111000000000010110000000000111101
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCcc-CCHHH
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRV-STPEQ 282 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~-~t~~~ 282 (472)
..|..++......|++++++|+++||+|||++++|+++||+||..|++.|+|++ +||++- ++.|+.+|+ +|+|+
T Consensus 165 ~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~----~~~D~~~r~~~t~e~ 240 (427)
T PRK09268 165 EIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLG----LTRDNNLRPDSSLEK 240 (427)
T ss_pred cCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccC----cccCCCCCCCCCHHH
Confidence 111111111124599999999999999999999999999999999999999975 899951 778888886 89999
Q ss_pred HhcCCCcccCC--CCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc---ccccccHHHHHHHHH
Q psy1213 283 MAKLKPAFVKP--HGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK---DQLLLGPAYATPQVL 357 (472)
Q Consensus 283 ~~~~~p~~~~~--~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~---~~~~~~~~~a~~~Al 357 (472)
|++++|+|. | +|++|.+|||+++|||+|+||+|+++|++++.+|..+|..+.....++. ..+..++..|+++||
T Consensus 241 l~~~~~v~~-p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~a~ 319 (427)
T PRK09268 241 LAKLKPVFG-KGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLMAPAYAVPRLL 319 (427)
T ss_pred HhCCCcccc-cCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhccHHHHHHHHH
Confidence 999999983 4 5789999999999999999999999999999888656643333333331 114457788999999
Q ss_pred HHcCCCcCCcCEEEccCcchHHHHHHH---HhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQILANL---KAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~~~~~~---ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
++||++++|||++|+||||++++++.+ |+|| ||++|+|.....|.++..+||++||++++|||+||||+++++|
T Consensus 320 ~~AGl~~~Did~~Ei~d~Fa~~~l~~l~~~e~lG---~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e 396 (427)
T PRK09268 320 ARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEE---YCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVAT 396 (427)
T ss_pred HHcCCCHHHCCEEEeccccHHHHHHHHHHhhhcc---ccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHH
Confidence 999999999999999999999966666 9999 9999998776666666557999999999999999999999999
Q ss_pred HHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 435 AANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 435 ~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+++|||++++++||+++|++||+|.++|||+
T Consensus 397 ~~~QL~~~~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 397 LAKLLAEKGSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred HHHHHHhcCCCEEEEEEcccCchheEEEEeC
Confidence 9999999999999999999999999999986
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-69 Score=554.22 Aligned_cols=420 Identities=43% Similarity=0.678 Sum_probs=342.7
Q ss_pred cCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~ 124 (472)
+.++||||+++||||+++++.+.+.++.+|+.++++++|+++|+++++||.+++|++.+...+.++++.++...|++..+
T Consensus 5 ~~~~V~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~ 84 (430)
T TIGR02446 5 QGERIAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT 84 (430)
T ss_pred cCCCEEEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCC
Confidence 34589999999999999777778899999999999999999999999999999998876555578999999999997679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhcc-CCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATI-RPDFFI 203 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 203 (472)
|+++|+++|+||+.|+..|++.|++|.+|++||+|+|+||+.|+.........+....+....+.+...+... ..+.+
T Consensus 85 p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (430)
T TIGR02446 85 DAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLM- 163 (430)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhc-
Confidence 9999999999999999999999999999999999999999887532110000000000011111000000000 00000
Q ss_pred CCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-Ccccee--ccceeeccCCCcc-CC
Q psy1213 204 PELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV--GDKTISKDNGVRV-ST 279 (472)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~--~~~~~~~de~~~~-~t 279 (472)
+..+...++.....|++.+++|+++||+|||++++|+++||++|.+|+++|.|.+ +.|+.. ....++.||.+|+ +|
T Consensus 164 ~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r~~~t 243 (430)
T TIGR02446 164 PVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIRHNST 243 (430)
T ss_pred ccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCCCCCC
Confidence 0001001111134699999999999999999999999999999999999999974 655432 1134789999985 89
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLER 359 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~ 359 (472)
+|+|++++|+|....|++|++|||+++|||+|+||+|++.|++++.+|.++|.+++....++...+..++..++++||++
T Consensus 244 ~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~a~~~al~~ 323 (430)
T TIGR02446 244 LAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSYATPLALQR 323 (430)
T ss_pred HHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHHHHHHHHHH
Confidence 99999999998422589999999999999999999999999999988988999999876555322456678899999999
Q ss_pred cCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHH
Q psy1213 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 360 Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
||++++|||++|+||||++++++.+|+||-..||++|.|....+|+++.++||++||++++|||+||||+++++|+++||
T Consensus 324 Agl~~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~v~e~~~qL 403 (430)
T TIGR02446 324 AGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLREL 403 (430)
T ss_pred cCCCHHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHHH
Confidence 99999999999999999999999999997545999987777888988666799999999999999999999999999999
Q ss_pred hhccCCcchhhhhccCcceeEEEEEe
Q psy1213 440 VREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 440 ~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
|++++++|++.+|++||+|.++++|+
T Consensus 404 ~g~ag~~g~~~~~~~GG~g~a~iie~ 429 (430)
T TIGR02446 404 KRRGGGLGLNTACAAGGLGAAMILEV 429 (430)
T ss_pred hhcCCCccEEEEEecCcceEEEEEEe
Confidence 99999999999999999999999997
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-68 Score=547.60 Aligned_cols=386 Identities=30% Similarity=0.442 Sum_probs=324.0
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
++++|||+++|||+++.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+....+++++.++..+|++.+.|.
T Consensus 2 ~~v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~ 81 (388)
T PRK06366 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTK 81 (388)
T ss_pred CcEEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcc
Confidence 57999999999999976667778999999999999999999999999999999876544345678889999999745899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCc
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL 206 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (472)
++++++|+||+.++..|++.|++|++|++||+|+|+||+.|+......+ +........... +.+ ++.+
T Consensus 82 ~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~-----~~~~~~~~~~~~-~~~----~~~~-- 149 (388)
T PRK06366 82 YTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLR-----WGPKHLLHKNYK-IDD----AMLV-- 149 (388)
T ss_pred eeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCccccccccc-----ccccccccccch-hhh----hhcc--
Confidence 9999999999999999999999999999999999999987753210000 000000000000 000 0000
Q ss_pred ccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceeccceeeccCCCccCCHHHHhc
Q psy1213 207 PAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGDKTISKDNGVRVSTPEQMAK 285 (472)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~~~~~~de~~~~~t~~~~~~ 285 (472)
+...++.....|++.+++||++||+|||++++|++++|+||.++++.|+|+ ++.|+. .++.||.+|++|.|+|++
T Consensus 150 ~g~~~~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~----~~~~d~~~r~~t~e~~~~ 225 (388)
T PRK06366 150 DGLIDAFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFN----DLDRDEGIRKTTMEDLAK 225 (388)
T ss_pred cCccccccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCccccccccc----ccccccCcccCCHHHHhh
Confidence 000111112458999999999999999999999999999999999988775 577775 177899999999999999
Q ss_pred CCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcCCCcC
Q psy1213 286 LKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLS 365 (472)
Q Consensus 286 ~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~~ 365 (472)
++|++ .|+|++|++|||+++|||+|+||+|+|+|++++.+|.++|+|++..+.+|.+ +..++..|++++|++|||+++
T Consensus 226 s~~v~-~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~-~~~~~~~A~~~al~~Agl~~~ 303 (388)
T PRK06366 226 LPPAF-DKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLD-FVEAPIPATRKLLEKQNKSID 303 (388)
T ss_pred CCCcc-CCCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHH-hcccHHHHHHHHHHHcCCCHH
Confidence 99998 4778899999999999999999999999999998898899999998776654 566678999999999999999
Q ss_pred CcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCC
Q psy1213 366 DIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQ 445 (472)
Q Consensus 366 dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~ 445 (472)
|||++|+||+|++++++.+|+|| | +|+ +||++||++++|||+||||+++++++++|||++.++
T Consensus 304 DiDv~Ei~daFa~~~l~~le~lg---l----------~g~----~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~~~ 366 (388)
T PRK06366 304 YYDLVEHNEAFSIASIIVRDQLK---I----------DNE----RFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHMK 366 (388)
T ss_pred HcceeeccchhHHHHHHHHHHhC---C----------CCC----ccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999 3 233 499999999999999999999999999999999889
Q ss_pred cchhhhhccCcceeEEEEEeCC
Q psy1213 446 FGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 446 ~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+||+++|++||+|.++|||++.
T Consensus 367 ~g~~~~c~~gg~g~a~~~e~~~ 388 (388)
T PRK06366 367 TGLATLCHGGGGAHTLTLEMVE 388 (388)
T ss_pred eEEEEEecccChhhEEEEEecC
Confidence 9999999999999999999863
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-68 Score=542.51 Aligned_cols=373 Identities=36% Similarity=0.499 Sum_probs=322.2
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~ 124 (472)
|++|||++++||||+++.+.+.+.++.+|+.++++++|+++|+++++||.+++|++..... ..++++.++..+|++..+
T Consensus 1 m~~V~Ivg~~rTpfgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~ 80 (387)
T PRK07850 1 MGNPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV 80 (387)
T ss_pred CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC
Confidence 3589999999999999776677899999999999999999999999999999998775443 257888999999997569
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|+...... .........
T Consensus 81 p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~---------------~~~~~~~~~------ 139 (387)
T PRK07850 81 GATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGP---------------GRGLPRPDS------ 139 (387)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccc---------------cccCccccc------
Confidence 99999999999999999999999999999999999999999885211000 000000000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccce------------eccceeec
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQ------------VGDKTISK 271 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a------------~~~~~~~~ 271 (472)
+++. ...|+..+++|+++||+|||++++|+++||+||.+|+++|+|+ |+.|+. .. +.++.
T Consensus 140 -----~~~~-~~~m~~~ae~~~~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~-~~~~~ 212 (387)
T PRK07850 140 -----WDID-MPNQFEAAERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGET-RLVTR 212 (387)
T ss_pred -----cccC-cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCc-eEeec
Confidence 0111 1346778999999999999999999999999999999999997 476654 22 25889
Q ss_pred cCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHH
Q psy1213 272 DNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAY 351 (472)
Q Consensus 272 de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~ 351 (472)
||.+|.+|+|+|++++|+| +++.+|.+|||+++|||+|+||+|++.|++++.+|.+||.|++....+|.. +..++..
T Consensus 213 D~~~r~~t~e~l~~l~p~~--~~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~-~~~~~~~ 289 (387)
T PRK07850 213 DQGLRDTTMEGLAGLKPVL--EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYY-HLDGPVQ 289 (387)
T ss_pred CCCcccCCHHHhccCCCCC--CCCCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchh-hcchHHH
Confidence 9999999999999999998 456779999999999999999999999999998888999999987655543 5667889
Q ss_pred HHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHH
Q psy1213 352 ATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRL 431 (472)
Q Consensus 352 a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~ 431 (472)
++++||+++|++++|||++|+||||++++++.+|.|| ++.++||++||++++|||+||||+++
T Consensus 290 a~~~al~~agl~~~did~~ei~d~F~~~~l~~~e~lg-----------------~~~~pvN~~GG~la~Ghp~gatG~~~ 352 (387)
T PRK07850 290 ATAKVLEKAGMKIGDIDLVEINEAFASVVLSWAQVHE-----------------PDMDKVNVNGGAIALGHPVGSTGARL 352 (387)
T ss_pred HHHHHHHHcCCCHHHcCeeeecccchHHHHHHHHHcC-----------------CCCCCcCCCCchhhcCCCcchhHHHH
Confidence 9999999999999999999999999999999999999 23345999999999999999999999
Q ss_pred HHHHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 432 TVHAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 432 v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++|+++|||++.+++||+++|++||+|++++||+.
T Consensus 353 v~e~~~qL~~~~~~~g~~~~c~~gg~g~a~~~e~~ 387 (387)
T PRK07850 353 ITTALHELERTDKSTALITMCAGGALSTGTIIERI 387 (387)
T ss_pred HHHHHHHHHhcCCCeEEEEEccccCceeEEEEEeC
Confidence 99999999999999999999999999999999973
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-67 Score=539.68 Aligned_cols=374 Identities=33% Similarity=0.505 Sum_probs=326.3
Q ss_pred CCceEEEecccccccc--cCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCC
Q psy1213 46 GKNIVFVDGVRTPFLL--SGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSD 122 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~--~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~ 122 (472)
|+++|||++.||||++ +.+.+.+.++.+|+.+|++++|+++|+++++||.+|+|++.+.+. ++++++.++..+|++.
T Consensus 1 m~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~ 80 (402)
T PRK08242 1 MTEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPE 80 (402)
T ss_pred CCcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCC
Confidence 3579999999999998 367888999999999999999999999999999999999987654 4678888889999975
Q ss_pred CCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCC
Q psy1213 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFF 202 (472)
Q Consensus 123 ~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (472)
+.|+++|+++|+||++||..|.++|++|.+|++|++|+|+||+.|+..... . + ..+...
T Consensus 81 ~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~-~--~--------------~~~~~~---- 139 (402)
T PRK08242 81 TVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGG-A--W--------------AMDPST---- 139 (402)
T ss_pred CCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCc-c--c--------------ccCccc----
Confidence 799999999999999999999999999999999999999999988632100 0 0 000000
Q ss_pred CCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec--cceeeccCCCcc-C
Q psy1213 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG--DKTISKDNGVRV-S 278 (472)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~--~~~~~~de~~~~-~ 278 (472)
..+ .....|++.+++|+++||+|||++++|+++||++|..|+++|+|+ |+.|+... ...++.|+.+|+ +
T Consensus 140 --~~~-----~~~~~mg~~Ae~~a~~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~ 212 (402)
T PRK08242 140 --NFP-----TYFVPQGISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGT 212 (402)
T ss_pred --ccc-----cccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCC
Confidence 000 012468999999999999999999999999999999999999997 58998621 123788999986 8
Q ss_pred CHHHHhcCCCcccCC----CC-----------------ceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEe
Q psy1213 279 TPEQMAKLKPAFVKP----HG-----------------SVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYV 337 (472)
Q Consensus 279 t~~~~~~~~p~~~~~----~g-----------------~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~ 337 (472)
|+|+|.+++|+|. | +| ++|.+|||+++|||+|+||+|++.|++++.+|+++|+|++..
T Consensus 213 t~e~l~~l~p~f~-~~~~~~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~ 291 (402)
T PRK08242 213 TMESLAKLKPSFA-MMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATI 291 (402)
T ss_pred CHHHHhCCCCCcc-CccccCcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEe
Confidence 9999999999984 4 33 689999999999999999999999999999999999999998
Q ss_pred ccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCC
Q psy1213 338 SQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGS 417 (472)
Q Consensus 338 ~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~ 417 (472)
..+|.. +..++..++++||+++|++++|||++|+||+|++++++.+|+|| ||+ .++|++||+
T Consensus 292 ~~~~~~-~~~~~~~a~~~al~~AGl~~~DID~~ei~daFa~~~l~~~e~lG---~~~--------------~~vN~~GG~ 353 (402)
T PRK08242 292 GSDPTI-MLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALD---IPH--------------DKVNVNGGA 353 (402)
T ss_pred cCCchh-hcccHHHHHHHHHHHcCCCHHHCCEEEecchhhHHHHHHHHHhC---CCC--------------cCCCcCCCH
Confidence 776653 56778899999999999999999999999999999999999999 443 349999999
Q ss_pred ccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 418 LSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 418 ~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++|||+||||+++++++++||+.+.+++||+++|++||+|+++|||+.
T Consensus 354 la~GHP~GAsG~~~~~~l~~~L~~~~~~~g~~~~c~ggG~g~a~~~e~~ 402 (402)
T PRK08242 354 IAMGHPLGATGAMILGTVLDELERRGKRTALITLCVGGGMGIATIIERV 402 (402)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCceeEEEEEeC
Confidence 9999999999999999999999988889999999999999999999973
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-67 Score=542.71 Aligned_cols=394 Identities=35% Similarity=0.526 Sum_probs=330.8
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
|+++|||+++||||+++.+.+.++++.+|+.+|+++||+++|+++++||.+++|+..+.+..+++++.++..+|++.+.|
T Consensus 1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p 80 (404)
T PRK06205 1 MRDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVP 80 (404)
T ss_pred CCceEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc
Confidence 35799999999999997777789999999999999999999999999999999998887777788899999999975689
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++|+.+|+||+.++.+|+++|++|.+|++||+|+|+||+.+.... ..+ +.. ..+. ....+.+..+.+
T Consensus 81 ~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~-~~~-----~~~--~~~~-~~~~~~~~~~~~--- 148 (404)
T PRK06205 81 GMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTT-DMR-----WGV--RGGG-VQLHDRLARGRE--- 148 (404)
T ss_pred eeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCccccc-ccc-----ccc--ccCc-chhhhhhccCcc---
Confidence 9999999999999999999999999999999999999998764211 000 000 0000 000010000000
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-c--c--eeeccCCCcc-C
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-D--K--TISKDNGVRV-S 278 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~--~--~~~~de~~~~-~ 278 (472)
......+.....|+..+++|+++||+|||++++|+++||+||.+|+++|+|+ |++|+.+. + + .++.|+.+|. +
T Consensus 149 ~~~~~~~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~ 228 (404)
T PRK06205 149 TAGGRRFPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADT 228 (404)
T ss_pred cccccccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCC
Confidence 0000011112456678999999999999999999999999999999999997 58998763 1 1 2567888886 8
Q ss_pred CHHHHhcCCCccc--CCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHH
Q psy1213 279 TPEQMAKLKPAFV--KPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQV 356 (472)
Q Consensus 279 t~~~~~~~~p~~~--~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~A 356 (472)
|+|++++++|+|. .|.|++|.+|||+++|||+|+||+|++.|++++.+|+++|.|++....+|.. +..++..|+++|
T Consensus 229 t~e~~~~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~-~~~~~~~a~~~a 307 (404)
T PRK06205 229 TLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSR-MGIGPVPATEKA 307 (404)
T ss_pred CHHHHhcCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCcc-ccccHHHHHHHH
Confidence 9999999999985 3778999999999999999999999999999999998999999998766643 456789999999
Q ss_pred HHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
|++|||+++|||++|+||+|++++++.+|+|| ||+++. .| ||++||++++|||+||||+++++|++
T Consensus 308 l~~Agl~~~Did~~ei~d~f~~~~l~~~e~lg---~~~~~~--------~~---vN~~GG~la~Ghp~gatG~~~v~e~~ 373 (404)
T PRK06205 308 LARAGLTLDDIDLIELNEAFAAQVLAVLKEWG---FGADDE--------ER---LNVNGSGISLGHPVGATGGRILATLL 373 (404)
T ss_pred HHHcCCCHHHCCEeeeccHHHHHHHHHHHHhC---cCcccC--------CC---cCCCCCHHhhCCChhhhHHHHHHHHH
Confidence 99999999999999999999999999999999 887431 23 99999999999999999999999999
Q ss_pred HHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 437 NRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 437 ~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+||+++.+++||++.|++||+|.++|||+.
T Consensus 374 ~qL~~~~~~~gl~~~c~~gg~g~a~~~e~~ 403 (404)
T PRK06205 374 RELQRRQARYGLETMCIGGGQGLAAVFERV 403 (404)
T ss_pred HHHHhcCCCeEEEEEeccCChhhEEEEEec
Confidence 999999999999999999999999999985
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-68 Score=541.81 Aligned_cols=385 Identities=34% Similarity=0.513 Sum_probs=326.3
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
+++||||++||||+++++.+.+.++.+|+.+|+++||+++|+++++||.+|+|+..+.....++++.++..+|++.+.|+
T Consensus 2 ~~v~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~ 81 (393)
T PRK08235 2 SKTVIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQT 81 (393)
T ss_pred CcEEEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcce
Confidence 57999999999999977777889999999999999999999999999999999987644456788888999999657999
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCc
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL 206 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (472)
++|+++|+||+++|..|+++|++|.+|++||+|+|+||+.|+.... .+. .. ..+. ....+.+..
T Consensus 82 ~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~-~~~-----~~--~~~~-~~~~~~~~~------- 145 (393)
T PRK08235 82 ETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPG-ARW-----GY--RMGD-NEVIDLMVA------- 145 (393)
T ss_pred eehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccc-ccc-----cc--ccCC-chhhhhhcc-------
Confidence 9999999999999999999999999999999999999988753210 000 00 0000 000000000
Q ss_pred ccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc-----ceeeccCCCcc-CC
Q psy1213 207 PAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD-----KTISKDNGVRV-ST 279 (472)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~-----~~~~~de~~~~-~t 279 (472)
+...+......|++++++|+++||+|||++++|+++||+||.+|+++|+|+ |++|..+.. ..++.|+.+|. +|
T Consensus 146 ~~~~~~~~~~~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t 225 (393)
T PRK08235 146 DGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTT 225 (393)
T ss_pred cccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCC
Confidence 000111112469999999999999999999999999999999999999997 589987631 12467888876 89
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLER 359 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~ 359 (472)
.|++++++|++ +|.|++|.+|||+++|||+|+||+|++.|++++.+|+++|.|++....++.. +..++..|+++||++
T Consensus 226 ~e~~~~~~~v~-~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~-~~~~~~~a~~~al~~ 303 (393)
T PRK08235 226 IEKLAKLKPVF-DKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD-FPRTPGYAINALLEK 303 (393)
T ss_pred HHHHhcCCCcc-cCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh-hcchHHHHHHHHHHH
Confidence 99999999998 5788999999999999999999999999999999998899998876655543 455678899999999
Q ss_pred cCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHH
Q psy1213 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 360 Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
|||+++|||++|+||+|++++++.+|+|| ||+ .| ||++||++++|||+||||+++++|+++||
T Consensus 304 agl~~~did~~e~~d~f~~~~l~~~e~lg---~~~-----------~p---vN~~GG~la~Ghp~gasG~~~~~~l~~qL 366 (393)
T PRK08235 304 TGKTVEDIDLFEINEAFAAVALASTEIAG---IDP-----------EK---VNVNGGAVALGHPIGASGARIIVTLIHEL 366 (393)
T ss_pred hCCCHHHCCeehhcchhHHHHHHHHHHhC---CCc-----------cc---CCcCCchHHhCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 665 35 99999999999999999999999999999
Q ss_pred hhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 440 VREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 440 ~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++++++++|+++|++||+|.++|||+.
T Consensus 367 ~~~~~~~g~~~~c~~gG~g~a~~~e~~ 393 (393)
T PRK08235 367 KRRGGGIGIAAICSGGGQGDAVLIEVH 393 (393)
T ss_pred HhcCCCeEEEEEcccccceEEEEEEeC
Confidence 999999999999999999999999974
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-67 Score=539.08 Aligned_cols=392 Identities=32% Similarity=0.506 Sum_probs=332.4
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHH-cCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDK 123 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~-agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~ 123 (472)
|+++||+++.||||+++++.+.+.++.+|+.++++++|++ +|+++++||.+|+|++.+... ++++++.++..+|++.+
T Consensus 1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~ 80 (400)
T PRK13359 1 MTEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHG 80 (400)
T ss_pred CCcEEEEeccCCCccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 3579999999999999777788899999999999999995 699999999999999876554 47899999999999867
Q ss_pred CceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCC
Q psy1213 124 TPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFI 203 (472)
Q Consensus 124 ~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (472)
.|+++|+++|+||+.|+.+|++.|++|++|++|++|+|+||+.|+.... ....+ +......+... .+.
T Consensus 81 vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~-~~~~~---------~~~~~~~~~~~--~~~ 148 (400)
T PRK13359 81 VPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGK-AESAF---------SRQAEIFDTTI--GWR 148 (400)
T ss_pred CceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccc-ccccc---------cCCcccccccc--ccc
Confidence 9999999999999999999999999999999999999999999862110 00000 00000000000 000
Q ss_pred CCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-c----ceeeccCCCcc
Q psy1213 204 PELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-D----KTISKDNGVRV 277 (472)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~----~~~~~de~~~~ 277 (472)
...+...+......|++.+++++++||+|||++++|+++||+++..|..+|+|+ |+.|+... + ..++.||.+|+
T Consensus 149 ~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~ 228 (400)
T PRK13359 149 FVNPLMKQLYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRE 228 (400)
T ss_pred ccCCccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCC
Confidence 001111222224579999999999999999999999999999999999999997 58898652 1 24788999999
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVL 357 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al 357 (472)
+|+|+|++++|+|. |+|++|.+|||+++|||+|+||+|++.|++++.+|+++|+|++....+|.. +..++..|+++||
T Consensus 229 ~t~e~l~~l~p~f~-~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~-~~~~~~~A~~~al 306 (400)
T PRK13359 229 TTLEALAKLKGVVR-PDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRV-MGIGPAPATQKLL 306 (400)
T ss_pred CCHHHHhcCCCccC-CCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCc-cchhHHHHHHHHH
Confidence 99999999999984 678999999999999999999999999999999999999999997665543 5667889999999
Q ss_pred HHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~ 437 (472)
++||++++|||++|+||+|++++++.+|+|| ||+ ++.| ||++||++++|||+||||+++++|+++
T Consensus 307 ~~AGl~~~DID~iei~dafa~~~l~~~e~lg---~~~---------~~~p---vN~~GG~la~GHp~gasG~~~v~e~~~ 371 (400)
T PRK13359 307 ARLGMTLDQFDVIELNEAFASQGLAVLRELG---LAD---------DDAR---VNPNGGAIALGHPLGASGARLVTTALY 371 (400)
T ss_pred HHhCCCHHHcCcCccCcHhHHHHHHHHHHcC---CCC---------CCCC---EECCCchhhcCCchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 664 2345 999999999999999999999999999
Q ss_pred HHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 438 RLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 438 qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|||++++++||++.|++||+|.++|||+.
T Consensus 372 qL~~~~~~~g~~~~c~~gG~g~a~~ie~~ 400 (400)
T PRK13359 372 QLERTGGRFALCTMCIGVGQGIAIAIERV 400 (400)
T ss_pred HHhhcCCCeEEEEEcccCCceeEEEEEeC
Confidence 99999999999999999999999999983
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-67 Score=536.05 Aligned_cols=385 Identities=35% Similarity=0.527 Sum_probs=326.2
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~ 124 (472)
|++|||||++||||+++.+.+.++++.+|+.+|+++||+++|+++++||.+++|+..++.. ..+.++.++..+|++.+.
T Consensus 2 m~~v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~ 81 (394)
T PRK09051 2 MREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQET 81 (394)
T ss_pred CCcEEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCC
Confidence 5689999999999999777778899999999999999999999999999999999887654 356788888889996458
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+||+.++..|+++|++|.+|++||+|+|+||+.|+.... .+. .+ ..+.. ...+... ..+
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~-~~~-----~~--~~~~~-~~~~~~~-~~~-- 149 (394)
T PRK09051 82 PAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPA-ARW-----GA--RMGDA-KLVDMMV-GAL-- 149 (394)
T ss_pred ceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccc-ccc-----cc--ccCCc-hhhhhhc-ccc--
Confidence 999999999999999999999999999999999999999987752110 000 00 00000 0000000 000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc----ceeeccCCCcc-C
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD----KTISKDNGVRV-S 278 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~----~~~~~de~~~~-~ 278 (472)
.++.....|++.+++|+++||+|||++++|+++||+||.+|+++|+|+ ++.|..... ..++.|+.+|. +
T Consensus 150 -----~~~~~~~~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~ 224 (394)
T PRK09051 150 -----HDPFGTIHMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADT 224 (394)
T ss_pred -----cccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCC
Confidence 011112469999999999999999999999999999999999999997 488886521 23567888886 8
Q ss_pred CHHHHhcCCCcccCCC-CceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPH-GSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVL 357 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~-g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al 357 (472)
|+|+|++++|++. |. ||+|.+|||+++|||+|+||+|++.|++++.+|++||+|++....+|.. +..++..|+++||
T Consensus 225 t~e~v~~~~~v~~-~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~-~~~~~~~a~~~al 302 (394)
T PRK09051 225 TLEDLAKLKPVFK-KENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEY-MGIGPVPATQKAL 302 (394)
T ss_pred CHHHHcCCCCccc-CCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCc-ccccHHHHHHHHH
Confidence 9999999999984 44 8999999999999999999999999999999999999999998766643 4567789999999
Q ss_pred HHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~ 437 (472)
++||++++|||++|+||+|++++++.+|+|| ||+ .+||++||++++|||+||||+++++++++
T Consensus 303 ~~agi~~~did~~ei~d~f~~~~~~~~e~lg---~~~--------------~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~ 365 (394)
T PRK09051 303 ERAGLTVADLDVIEANEAFAAQACAVTRELG---LDP--------------AKVNPNGSGISLGHPVGATGAIITVKALY 365 (394)
T ss_pred HHcCCCHHHcCEEEecCccHHHHHHHHHHhC---CCc--------------cccCCCccHHHhcchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 544 34999999999999999999999999999
Q ss_pred HHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 438 RLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 438 qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
||+++.+++||+++|++||+|+++|||+.
T Consensus 366 ~L~~~~~~~g~~~~c~~gG~g~a~~~e~~ 394 (394)
T PRK09051 366 ELQRIGGRYALVTMCIGGGQGIAAIFERL 394 (394)
T ss_pred HHHhcCCCEEEEEEccccChhhEEEEEeC
Confidence 99999999999999999999999999984
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-67 Score=535.22 Aligned_cols=380 Identities=33% Similarity=0.515 Sum_probs=328.0
Q ss_pred ccccCCceEEEecccccccc-cCccCCCCCHHHHHHHHHHHHHHHc-CCCcCccCEEEEEeecCCCC-CChHHHHHHHHc
Q psy1213 42 KDKTGKNIVFVDGVRTPFLL-SGTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQEVK-TSNIGREAALSA 118 (472)
Q Consensus 42 ~~~~~~~~~Ivg~~~t~~~~-~~~~~~~~~~~~La~~A~~~Al~~a-gi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~l 118 (472)
|+|.|+++|||+++||||++ +.+.+.+.++.+|+.+|+++||+++ |+++++||.+|+|+..++.. +++.++.+...+
T Consensus 1 ~~~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~ 80 (399)
T PRK09052 1 MSKQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLA 80 (399)
T ss_pred CCCCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHc
Confidence 46778899999999999998 5667788999999999999999997 99999999999998877654 356677677888
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|++...|+++|+++|+||+.|+.+|+++|++|++|++||+|+|+||+.|+... .. . .....
T Consensus 81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~-~~-------------~----~~~~~- 141 (399)
T PRK09052 81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGN-KP-------------S----MSPAI- 141 (399)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCc-cc-------------c----cCcch-
Confidence 99744899999999999999999999999999999999999999998874210 00 0 00000
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc-----------
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD----------- 266 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~----------- 266 (472)
+ +.+. .......|++.+++|+++||+|||++++|+++||+||..++++|+|+ +++|..+..
T Consensus 142 ---~--~~~~--~~~~~~~~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~ 214 (399)
T PRK09052 142 ---F--ARDE--NVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVD 214 (399)
T ss_pred ---h--ccCC--cccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCccc
Confidence 0 0000 01112479999999999999999999999999999999999998886 577776521
Q ss_pred ---ceeeccCCCcc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc
Q psy1213 267 ---KTISKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK 342 (472)
Q Consensus 267 ---~~~~~de~~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~ 342 (472)
..+..|+.+|+ +|+|.|.+++|+|. |++++|.+|||+++|||+++||+|++.|++++.+|+++|+|++..+.+|.
T Consensus 215 ~~~~~~~~D~~~r~~~~~e~l~~l~p~f~-~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~ 293 (399)
T PRK09052 215 VKTRTVDLDEGPRADTSLEGLAKLKPVFA-NKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPE 293 (399)
T ss_pred ccceEeccCCCCCCCCCHHHHhcCCCccC-CCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCC
Confidence 23678999987 89999999999994 67999999999999999999999999999999999999999999877665
Q ss_pred ccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccC
Q psy1213 343 DQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGH 422 (472)
Q Consensus 343 ~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Gh 422 (472)
. +..++..|+++||++||++++|||++|+||+|++++++.+|.|| ||+ .| ||++||++++||
T Consensus 294 ~-~~~~~~~A~~~al~~Agi~~~did~~ei~D~f~~~~l~~~e~lg---~~~-----------~~---vN~~GG~la~GH 355 (399)
T PRK09052 294 I-MGIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLG---LDP-----------SK---VNPLGGAIALGH 355 (399)
T ss_pred c-cchhHHHHHHHHHHHcCCCHHHcCEEEeCcHHHHHHHHHHHHhC---CCC-----------cc---cCCCCchhhcCc
Confidence 3 55678999999999999999999999999999999999999999 554 24 999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 423 PFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 423 p~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|+|+||+++++++++||+++.+++||+++|++||+|.++|||+.
T Consensus 356 p~gasG~~~~~~~~~~L~~~~~~~g~~~~c~~gg~g~a~~~e~~ 399 (399)
T PRK09052 356 PLGATGAIRTATVVHGLRRTNLKYGMVTMCVGTGMGAAGIFERL 399 (399)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCceeEEEEEeC
Confidence 99999999999999999999889999999999999999999974
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-67 Score=533.68 Aligned_cols=391 Identities=33% Similarity=0.522 Sum_probs=328.5
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHH-HcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCC
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQ-KTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~-~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~ 124 (472)
++||||+++||||+++.+.+.+.++.+|+.+|++++|+ ++++++++||.+++|++.+... ++++++.++..+|++.+.
T Consensus 1 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~ 80 (400)
T TIGR02430 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV 80 (400)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 36899999999999976677789999999999999999 5799999999999998875443 468999999999997569
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|+... .....+. .. ....+... .+..
T Consensus 81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~-~~~~~~~---~~------~~~~~~~~--~~~~ 148 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMG-KADSAFS---RS------AKIEDTTI--GWRF 148 (400)
T ss_pred ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCccccc-ccccccc---cc------cccccccc--cccc
Confidence 99999999999999999999999999999999999999998875211 0000000 00 00000000 0000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-Cccceec-c----ceeeccCCCcc-
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVG-D----KTISKDNGVRV- 277 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~-~----~~~~~de~~~~- 277 (472)
..+...+......|++.+++|+++||+|||++|+|+++||++|..|+++|+|++ +.|+.+. + ..++.|+.+|+
T Consensus 149 ~~~~~~~~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~ 228 (400)
T TIGR02430 149 INPLMKALYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPE 228 (400)
T ss_pred cCcccccccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCC
Confidence 011111222245799999999999999999999999999999999999999974 8898762 2 23677888885
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVL 357 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al 357 (472)
+|+|++++++|+| .|+|++|.+|||+++|||+|+||++++.|++++.+|++||+|++....+|.. ...++..++++||
T Consensus 229 ~t~e~l~~~~~v~-~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~-~~~~~~~a~~~al 306 (400)
T TIGR02430 229 TTLEGLAKLKPVV-RPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRI-MGIGPVPATQKLL 306 (400)
T ss_pred CCHHHHhcCCCcc-cCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCcc-ccchHHHHHHHHH
Confidence 8999999999998 4678999999999999999999999999999998888999999987655543 4557789999999
Q ss_pred HHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~ 437 (472)
++||++++|||++|+||+|++++++.+|.|| ||+++ .| ||++||++++|||+|+||+++++|+++
T Consensus 307 ~~Agl~~~DID~~ei~D~f~~~~l~~~e~lG---~~~~~---------~p---vN~~GG~la~GHp~gasG~~~~~e~~~ 371 (400)
T TIGR02430 307 ARAGLSIDQFDVIELNEAFAAQALAVLRELG---LADDD---------AR---VNPNGGAIALGHPLGASGARLVLTALR 371 (400)
T ss_pred HHhCCCHHHCCCcccCcHHHHHHHHHHHHcC---CCCCC---------Ce---ECCCCchHhccChHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 77643 35 999999999999999999999999999
Q ss_pred HHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 438 RLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 438 qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|||++++++||++.|++||+|+++|||+.
T Consensus 372 qLr~~~~~~g~~~~c~~gG~g~a~~~e~~ 400 (400)
T TIGR02430 372 QLERSGGRYALCTMCIGVGQGIALAIERV 400 (400)
T ss_pred HHHhcCCCEEEEEEccccChhhEEEEEeC
Confidence 99999999999999999999999999973
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-66 Score=531.75 Aligned_cols=391 Identities=33% Similarity=0.533 Sum_probs=329.5
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHH-HcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCC
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQ-KTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~-~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~ 124 (472)
++||||+++||||+++.+.+.+.++.+|+.+|++++|+ ++|+++++||.+++|++.+.+. +.++++.++..+|++.++
T Consensus 2 ~~V~Ivg~~rTpfgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~v 81 (401)
T PRK09050 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSV 81 (401)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCC
Confidence 57999999999999976677789999999999999999 5899999999999999876544 478999999999997679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+||+.|+..|++.|++|++|++||+|+|+||+.|+... ..+..+.. .. ...+... .+..
T Consensus 82 P~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~-~~~~~~~~---~~------~~~~~~~--~~~~ 149 (401)
T PRK09050 82 PGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMG-KADSAFSR---QA------EIFDTTI--GWRF 149 (401)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCccccc-chhhhccc---Cc------ccccccc--cccc
Confidence 99999999999999999999999999999999999999999885211 00100100 00 0000000 0000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc-----ceeeccCCCcc-
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD-----KTISKDNGVRV- 277 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~-----~~~~~de~~~~- 277 (472)
..+...+......|++.+++|+++||+|||++|.|+..+|+++..|.+||+|+ |+.|+.+.. ..++.|+.+|+
T Consensus 150 ~~~~~~~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~ 229 (401)
T PRK09050 150 VNPLMKAQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPE 229 (401)
T ss_pred cCCccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCC
Confidence 00111122224579999999999999999999999999999999999999997 589986531 23567888885
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVL 357 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al 357 (472)
+|.|+|++++|+|. |++++|.+|||+++|||+|+||++++.|++++.+|++||+|++.....|.. ...++..++++||
T Consensus 230 ~t~e~l~~l~~~~~-~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~-~~~~~~~a~~~al 307 (401)
T PRK09050 230 TTLEALAKLKPVFR-PDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRI-MGIGPAPATRKLL 307 (401)
T ss_pred CCHHHHhcCCCccc-CCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCcc-ccchHHHHHHHHH
Confidence 89999999999984 678999999999999999999999999999999999999999998665543 4557789999999
Q ss_pred HHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~ 437 (472)
++|||+++|||++|+||+|++++++.+|.|| ||++ ++| ||++||++++|||+|+||+++++|+++
T Consensus 308 ~~Agl~~~DId~~ei~D~f~~~~l~~~e~lg---~~~~---------~~p---vN~~GG~la~Ghp~gasG~~~~~e~~~ 372 (401)
T PRK09050 308 ARLGLTIDQFDVIELNEAFAAQGLAVLRQLG---LADD---------DAR---VNPNGGAIALGHPLGMSGARLVLTALH 372 (401)
T ss_pred HHcCCCHHHCCccccCcHhHHHHHHHHHHcC---CCCC---------CCC---EeCCCchHhcCCchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 7763 145 999999999999999999999999999
Q ss_pred HHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 438 RLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 438 qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|||++++++||+++|++||+|.++|||+.
T Consensus 373 qLr~~~~~~g~~~~c~~gG~g~a~~~e~~ 401 (401)
T PRK09050 373 QLERTGGRYALCTMCIGVGQGIALAIERV 401 (401)
T ss_pred HHHhcCCCeEEEEEcccccceeEEEEEeC
Confidence 99999999999999999999999999973
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-66 Score=530.24 Aligned_cols=391 Identities=34% Similarity=0.529 Sum_probs=328.5
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~ 124 (472)
|++||||++.||||+++.+.+.+.++.+|+.+|+++||+++|+++++||.+++|++.++.. ++++++.++..+|+|..+
T Consensus 1 ~~~v~Iv~~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~ 80 (401)
T PRK08131 1 MLDAYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV 80 (401)
T ss_pred CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence 4589999999999998766777899999999999999999999999999999999876543 467888899999997679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+||+.|+..|++.|++|++|++||+|+|+||+.|+.... ....+ +......+......+
T Consensus 81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~-- 148 (401)
T PRK08131 81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGK-AESAF---------SRDAKVFDTTIGARF-- 148 (401)
T ss_pred ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccc-ccccc---------ccCcchhhhhhcccc--
Confidence 999999999999999999999999999999999999999988752110 00000 000000000000000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc------ceeeccCCCcc
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD------KTISKDNGVRV 277 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~------~~~~~de~~~~ 277 (472)
..|...+......|++.+++|+++||+|||++++|+++||+++..+.++++|+ ++.|+.... ..++.||.+|+
T Consensus 149 ~~~~~~~~~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~ 228 (401)
T PRK08131 149 PNPKIVAQYGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRP 228 (401)
T ss_pred cCcccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCC
Confidence 01111111223578999999999999999999999999999999999999776 477775421 24889999998
Q ss_pred -CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHH
Q psy1213 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQV 356 (472)
Q Consensus 278 -~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~A 356 (472)
+|+|.|.+++|+| +.|++|.+|||+++|||+|+||+|++.|++++.+|+++|+|++....+|.. +..++..++++|
T Consensus 229 ~~~~e~L~~l~p~f--~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~-~~~~~~~a~~~a 305 (401)
T PRK08131 229 SSTVEALTKLKPLF--EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRI-MGIGPVEAIKKA 305 (401)
T ss_pred CCCHHHHhcCCCCC--CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCcc-ccchHHHHHHHH
Confidence 8999999999999 458999999999999999999999999999998998999999998776643 456788999999
Q ss_pred HHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
|+++||+++|||++|+||+|++++++.+|+|| ||. +++| ||++||++++|||+||||+++++|++
T Consensus 306 ~~~agl~~~did~~ei~d~Fa~~~l~~~e~lg---~~~---------~~~~---vN~~GG~la~GhP~gAtG~~~~~el~ 370 (401)
T PRK08131 306 LARAGLTLDDMDIIEINEAFASQVLGCLKGLG---VDF---------DDPR---VNPNGGAIAVGHPLGASGARLALTAA 370 (401)
T ss_pred HHHcCCCHHHCCeehhccHHHHHHHHHHHHcC---CCC---------CCCC---ccCCccHHhcCCchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999 652 1245 99999999999999999999999999
Q ss_pred HHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 437 NRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 437 ~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+|||+++++++++.+|.+||+|.++|||+.
T Consensus 371 ~qL~~~~~~~~~~~~~~ggg~g~a~i~e~~ 400 (401)
T PRK08131 371 RELQRRGKRYAVVSLCIGVGQGLAMVIERV 400 (401)
T ss_pred HHHHhcCCCceEEEEEecCChhhEEEEEec
Confidence 999999989999999999999999999984
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-66 Score=528.98 Aligned_cols=384 Identities=32% Similarity=0.479 Sum_probs=326.8
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
++++||++.||||++.++.+.+.++.+|+.++++++|+++|+++++||.+++|++.+.+.++++++.++..+|++...|+
T Consensus 3 ~~~~iv~~~Rtp~~~~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~ 82 (392)
T PRK06633 3 KPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPG 82 (392)
T ss_pred CCEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccc
Confidence 48999999999999987889999999999999999999999999999999999987665567888999999999756999
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCc
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL 206 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (472)
++|+++|+||+.|+.+|++.|++|++|++|++|+|+||+.|.... .+..+ ..+. ....+.+..
T Consensus 83 ~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~--~~~~~-------~~~~-~~~~~~~~~------- 145 (392)
T PRK06633 83 YTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSY--IRAGA-------KFGD-IKMVDLMQY------- 145 (392)
T ss_pred hhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchh--ccccc-------ccCc-chhhhhhcc-------
Confidence 999999999999999999999999999999999999998763110 00000 0000 000110000
Q ss_pred ccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-c---ceeeccCCCcc-CCH
Q psy1213 207 PAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-D---KTISKDNGVRV-STP 280 (472)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~---~~~~~de~~~~-~t~ 280 (472)
+...+......|++.+++|+++||+|||++++|+++||+||..++++|+|+ ++.|.... + ..++.||.+|+ ++.
T Consensus 146 ~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~ 225 (392)
T PRK06633 146 DGLTDVFSGVFMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSL 225 (392)
T ss_pred cccccccCcchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCH
Confidence 000111112469999999999999999999999999999999999999765 57887642 1 34788999998 678
Q ss_pred HHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHc
Q psy1213 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERA 360 (472)
Q Consensus 281 ~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~A 360 (472)
+.+.+++|+|. |.|++|.+|||+++|||+++||+|++.|++++.+|++||+|++...++|.. +..++..++++||++|
T Consensus 226 e~l~~l~p~~~-~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~-~~~~~~~a~~~Al~~A 303 (392)
T PRK06633 226 EILSKLRPAFD-KNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSI-MGTAPVPASQKALSKA 303 (392)
T ss_pred HHHccCCCccC-CCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcch-hchHHHHHHHHHHHHc
Confidence 88888899984 679999999999999999999999999999999999999999998766653 4566789999999999
Q ss_pred CCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHh
Q psy1213 361 GLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLV 440 (472)
Q Consensus 361 gl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~ 440 (472)
||+++|||++|+||+|++++++..|.|++ +..+||++||++++|||+||||+++++++++||+
T Consensus 304 Gl~p~DID~~ei~dafa~~~l~~~~~l~~-----------------~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~ 366 (392)
T PRK06633 304 GWSVNDLEVIEVNEAFAAQSIYVNREMKW-----------------DMEKVNINGGAIAIGHPIGASGGRVLITLIHGLR 366 (392)
T ss_pred CCCHHHcCeeehhhHHHHHHHHHHhhhCC-----------------CccccCCCCchHhhCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999982 3345999999999999999999999999999999
Q ss_pred hccCCcchhhhhccCcceeEEEEEeC
Q psy1213 441 REDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 441 ~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++.+++||++.|++||+|.++|||++
T Consensus 367 ~~~~~~g~~~~c~~gG~g~a~~~e~~ 392 (392)
T PRK06633 367 RAKAKKGLVTLCIGGGMGMAMCVEAV 392 (392)
T ss_pred hcCCCeEEEEEecccChhheEEEEeC
Confidence 99999999999999999999999985
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-65 Score=524.77 Aligned_cols=379 Identities=30% Similarity=0.462 Sum_probs=322.5
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCCc
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~~ 125 (472)
++||||+++||||+++.+.+.+.++.||+.+|++++|+++|+++++||.+++|++.+... ..++++.+....|++.+.|
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP 81 (390)
T PRK06504 2 AEAYIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVP 81 (390)
T ss_pred CceEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc
Confidence 579999999999999777778999999999999999999999999999999998875433 3678888888889976899
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++|+++|+||+.|+..|++.|++|++|++||+|+|+||+.|+......+ +.. ..+ ....+.+
T Consensus 82 ~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~-----~~~--~~~-------~~~~~~~--- 144 (390)
T PRK06504 82 GTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLP-----AKN--GLG-------HYKSPGM--- 144 (390)
T ss_pred eEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccc-----ccc--ccc-------ccccccc---
Confidence 99999999999999999999999999999999999999988753211000 000 000 0000000
Q ss_pred ccccccc--ccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-c----ceeeccCCCcc
Q psy1213 206 LPAVAEF--SSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-D----KTISKDNGVRV 277 (472)
Q Consensus 206 ~~~~~~~--~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~----~~~~~de~~~~ 277 (472)
.+. .....|+..+++|+++||+|||++++|+++||++|..|+++|+|+ |+.|+... + ..++.||.+|+
T Consensus 145 ----~~~~~~~~~~~~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~ 220 (390)
T PRK06504 145 ----EERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRF 220 (390)
T ss_pred ----ccccCCCCCCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCC
Confidence 010 012357778999999999999999999999999999999999886 58787652 1 23678999986
Q ss_pred -CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHH
Q psy1213 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQV 356 (472)
Q Consensus 278 -~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~A 356 (472)
+|+|+|++++|++ +.|++|.+|||+++|||+|+||+|++.|++++.+|.+||.+++....+|.. +..++..|++++
T Consensus 221 ~~t~e~l~~~~~~~--~~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~-~~~~~~~a~~~a 297 (390)
T PRK06504 221 DATLEGIAGVKLIA--EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVI-MLEAPLPATERA 297 (390)
T ss_pred CCCHHHHhcCCCCC--CCCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchh-hhccHHHHHHHH
Confidence 8999999999995 348999999999999999999999999999998888899998887665532 567888999999
Q ss_pred HHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
|+++|++++|||++|+||||++++++.+|+|| ||++ | ||++||++++|||+||||++++.+++
T Consensus 298 ~~~agl~~~Did~~Ei~d~Fa~~~l~~~e~lG---~~~~-----------p---vN~~GG~la~Ghp~gatG~r~~~~l~ 360 (390)
T PRK06504 298 LKKAGMKIDDIDLYEVNEAFASVPLAWLKATG---ADPE-----------R---LNVNGGAIALGHPLGASGTKLMTTLV 360 (390)
T ss_pred HHHcCCCHHHCCEEEecccchHHHHHHHHHhC---CCCC-----------C---cCCCCcHHhcCCCcchhHHHHHHHHH
Confidence 99999999999999999999999999999999 6552 4 99999999999999999999999999
Q ss_pred HHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 437 NRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 437 ~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+|||++.+++|++++|++||++.++||+++
T Consensus 361 ~~lr~~~~~~gl~~~~~ggg~g~a~ile~~ 390 (390)
T PRK06504 361 HALKQRGKRYGLQTMCEGGGMANVTIVERL 390 (390)
T ss_pred HHHHhhCCCeEEEEEeecccceeEEEEEeC
Confidence 999999999999999999999999999873
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-66 Score=529.74 Aligned_cols=386 Identities=31% Similarity=0.494 Sum_probs=325.3
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
++|||||++||||+++.+.+.+.++.+|+.+|+++||+++|+++++||.+++|++.+++...++++..+..+|+|.+.|+
T Consensus 7 ~~V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~ 86 (397)
T PRK06954 7 DPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGC 86 (397)
T ss_pred CCEEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccE
Confidence 38999999999999876667789999999999999999999999999999999887766555677777788899756999
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCc
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL 206 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (472)
++|+++|+||+.++..|+++|++|.+|++||+|+|+||+.|+.... .+... ..+. ....+.+..+.+
T Consensus 87 ~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~-~r~~~-------~~~~-~~~~~~~~~~~~---- 153 (397)
T PRK06954 87 TTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPK-ARGGM-------RMGH-GQVLDHMFLDGL---- 153 (397)
T ss_pred eeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcc-ccccc-------ccCc-chhhhhhccccc----
Confidence 9999999999999999999999999999999999999987652110 00000 0000 000111100000
Q ss_pred ccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec----cceeeccCCCccCCHH
Q psy1213 207 PAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG----DKTISKDNGVRVSTPE 281 (472)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~----~~~~~~de~~~~~t~~ 281 (472)
. ..+.....|++.+++|+++||+|||++++|++++|+||..|..+|+|. ++.|+... ...++.||.+|.++.+
T Consensus 154 ~--~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~ 231 (397)
T PRK06954 154 E--DAYDKGRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPE 231 (397)
T ss_pred c--cccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHH
Confidence 0 011123579999999999999999999999999999999998888886 46777542 2358889999999999
Q ss_pred HHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcC
Q psy1213 282 QMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAG 361 (472)
Q Consensus 282 ~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Ag 361 (472)
.+.+++|+|. |.|++|.+|||+++|||+|+||+|++.|++++.+|+++|.|++.....|.. +..++..++++||+++|
T Consensus 232 ~l~~l~~~f~-~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~-~~~~~~~a~~~al~~ag 309 (397)
T PRK06954 232 KIPTLKPAFS-KTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSK-FTTAPVGAIRKLFEKNG 309 (397)
T ss_pred HHhCCCCccC-CCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCccc-ccchHHHHHHHHHHHcC
Confidence 9999999994 779999999999999999999999999999999998899998876555543 45577899999999999
Q ss_pred CCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhh
Q psy1213 362 LSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVR 441 (472)
Q Consensus 362 l~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~ 441 (472)
|+++|||++|+||+|++++++.+|+|| ||+ .+||++||++++|||+||||+++++|+++||++
T Consensus 310 l~~~Did~~ei~d~fa~~~l~~~e~lg---~~~--------------~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~ 372 (397)
T PRK06954 310 WRAAEVDLFEINEAFAVVTMAAMKEHG---LPH--------------EKVNVNGGACALGHPIGASGARILVTLIGALRA 372 (397)
T ss_pred CCHHHCCEEehhhHHHHHHHHHHHHhC---CCc--------------ccCCcCCChHHhcccHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999 554 349999999999999999999999999999999
Q ss_pred ccCCcchhhhhccCcceeEEEEEeC
Q psy1213 442 EDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 442 ~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++++||+++|++||+|.++|||+.
T Consensus 373 ~~g~~~v~~~c~~gg~g~a~~~e~~ 397 (397)
T PRK06954 373 RGGKRGVASLCIGGGEATAMGIELI 397 (397)
T ss_pred cCCCeEEEEEccccchhhEEEEEeC
Confidence 9999999999999999999999984
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-65 Score=525.80 Aligned_cols=384 Identities=34% Similarity=0.510 Sum_probs=326.1
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
+++||||++||||+++++.+.++++.+|+.+|+++||+++|+++++||.+++|+..+....+++++.++..+|++...|+
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~ 81 (393)
T PRK05656 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPA 81 (393)
T ss_pred CcEEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcce
Confidence 57999999999999977777889999999999999999999999999999999987654466788999999999744899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCc
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL 206 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (472)
++|+++|+||+.++.+|+++|++|.+|++||+|+|+||..|+.... .+. .+ ..+. ....+....
T Consensus 82 ~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~-~~~-----~~--~~~~-~~~~~~~~~------- 145 (393)
T PRK05656 82 MTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPG-ART-----GL--RMGH-AQLVDSMIT------- 145 (393)
T ss_pred EEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCcccccc-ccc-----cc--cccc-hhhhhhhcc-------
Confidence 9999999999999999999999999999999999999998863210 000 00 0000 000000000
Q ss_pred ccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec----c-ceeeccCCCcc-CC
Q psy1213 207 PAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG----D-KTISKDNGVRV-ST 279 (472)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~----~-~~~~~de~~~~-~t 279 (472)
+..++......|++.+++|+++||+|||++++|+++||+++..|+.+|+|+ ++.|+... . ..++.||.+|+ +|
T Consensus 146 ~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~ 225 (393)
T PRK05656 146 DGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTT 225 (393)
T ss_pred ccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCC
Confidence 001111112469999999999999999999999999999999999999886 47787542 1 23678999997 89
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLER 359 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~ 359 (472)
.|.+.+++|+|. |++++|.+|||+++|||+|+||+|++.|++++.+++++|.|++....+|.. +..++..++++||++
T Consensus 226 ~e~l~~l~p~~~-~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~-~~~~~~~a~~~al~~ 303 (393)
T PRK05656 226 AESLAKLKPAFK-KDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAI-MGIGPVSATRRCLDK 303 (393)
T ss_pred HHHHhcCCCCcC-CCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcc-cchhHHHHHHHHHHH
Confidence 999999999984 678999999999999999999999999999999889999999998766643 456788999999999
Q ss_pred cCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHH
Q psy1213 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 360 Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
+|++++|||++|+||+|++++++.+|.|| ||+ .++|++||++++|||+||||+++++++++||
T Consensus 304 agl~~~dId~~e~~d~f~~~~~~~~e~lg---~~~--------------~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l 366 (393)
T PRK05656 304 AGWSLAELDLIEANEAFAAQSLAVGKELG---WDA--------------AKVNVNGGAIALGHPIGASGCRVLVTLLHEM 366 (393)
T ss_pred cCCCHHHCCEEEecCccHHHHHHHHHHhC---CCC--------------ccCCcCCCHHHhCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 443 3499999999999999999999999999999
Q ss_pred hhccCCcchhhhhccCcceeEEEEEe
Q psy1213 440 VREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 440 ~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+.+.+++||+++|++||+|.++|||+
T Consensus 367 ~~~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 367 IRRDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred HHcCCCEEEEEEcccCcceEEEEEec
Confidence 98889999999999999999999997
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-65 Score=525.46 Aligned_cols=380 Identities=37% Similarity=0.585 Sum_probs=318.6
Q ss_pred CceEEEeccccccccc------CccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcC
Q psy1213 47 KNIVFVDGVRTPFLLS------GTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAG 119 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~------~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lG 119 (472)
++++|||++||||+++ ++.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..++.. +.+.++......+
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~ 81 (394)
T PRK06445 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLAR 81 (394)
T ss_pred CcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcC
Confidence 5799999999999986 35677899999999999999999999999999999999887543 2445555555556
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
++.+.|+++|+++|+||+.++.+|+++|++|.+|++||+|+|+||+.|+. ..... . ... .. ..+..
T Consensus 82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~-~~~~~------~--~~~--~~-~~~~~-- 147 (394)
T PRK06445 82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMG-DNPHI------E--PNP--KL-LTDPK-- 147 (394)
T ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccc-cCccc------c--CCh--hh-ccccc--
Confidence 65578999999999999999999999999999999999999999987742 10000 0 000 00 00000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-Cccceecc----ceeeccCC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGD----KTISKDNG 274 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~----~~~~~de~ 274 (472)
+ .. ++......|++.+++|+++||+|||++++|++++|+||.+|+++|+|++ +.|+...+ ..++.|+.
T Consensus 148 --~----~~-~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~ 220 (394)
T PRK06445 148 --Y----IE-YDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQS 220 (394)
T ss_pred --c----Cc-ccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCC
Confidence 0 00 1111123599999999999999999999999999999999999999975 78876521 12466777
Q ss_pred Ccc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHH
Q psy1213 275 VRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYAT 353 (472)
Q Consensus 275 ~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~ 353 (472)
+|. +|.|++++++|++ +|.|++|.+|||+++|||+|+||+|++.|++++.+|++||+|++....+|.. +..++..++
T Consensus 221 ~r~~~t~e~~~~~~~v~-~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~-~~~~~~~a~ 298 (394)
T PRK06445 221 VRPDTSLEKLAKLPPAF-KPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAI-MGKGPVPAS 298 (394)
T ss_pred CCCCCCHHHHhcCCCcc-CCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCch-hcchHHHHH
Confidence 775 8999999999998 4778999999999999999999999999999999998999999998766543 456788999
Q ss_pred HHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 354 PQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 354 ~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
++||++||++++|||++|+||+|++++++.+|+|| ||+ ++||++||++++|||+||||+++++
T Consensus 299 ~~al~~Agl~~~dId~~e~~d~f~~~~l~~~e~lg---~~~--------------~~vN~~GG~la~Ghp~gatG~~~v~ 361 (394)
T PRK06445 299 KKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELG---LDP--------------ETVNIKGGAIAIGHPLGATGARIVG 361 (394)
T ss_pred HHHHHHcCCCHHHcCEEEecccchHHHHHHHHHhC---CCc--------------cccCCCCCHHHcCCCccchHHHHHH
Confidence 99999999999999999999999999999999999 655 2499999999999999999999999
Q ss_pred HHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|+++||+.+.+++||++.|++||+|+++|||+.
T Consensus 362 e~~~qL~~~~~~~gl~~~~~~gg~g~a~~~e~~ 394 (394)
T PRK06445 362 TLARQLQIKGKDYGVATLCVGGGQGGAVVLERV 394 (394)
T ss_pred HHHHHHHhcCCCEEEEEEcccCChhhEEEEEcC
Confidence 999999988889999999999999999999974
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-65 Score=522.47 Aligned_cols=374 Identities=37% Similarity=0.585 Sum_probs=321.0
Q ss_pred ceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHH-cCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCC
Q psy1213 48 NIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 48 ~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~-agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~ 124 (472)
+||||+++||||++. .+.+.+.++.+|+.+|++++|++ +|+++++||.+++|++..... +.++++.+....|++..+
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 489999999999983 56677899999999999999995 699999999999998764433 356888888899998679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|........ .. +. +.+
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~-----------~~-----~~----~~~-- 138 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFH-----------PG-----MS----LHV-- 138 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcc-----------hh-----HH----hhh--
Confidence 999999999999999999999999999999999999999988753110000 00 00 000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc-----ceeeccCCCcc-
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD-----KTISKDNGVRV- 277 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~-----~~~~~de~~~~- 277 (472)
.. .+..|++.+++|+++||+|||++++|+++||+||.+|+++|+|+ |+.|+.... ..++.|+.+|.
T Consensus 139 -----~~--~~~~~~~~a~~~~~~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~ 211 (385)
T TIGR02445 139 -----AK--AAGMMGLTAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPE 211 (385)
T ss_pred -----cc--ccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCC
Confidence 00 12479999999999999999999999999999999999999995 688886531 23567888886
Q ss_pred CCHHHHhcCCCcccCC-CCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHH
Q psy1213 278 STPEQMAKLKPAFVKP-HGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQV 356 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~-~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~A 356 (472)
+|.|++++++|++. | +|.+|.+|||+++|||+++||++++.|++++.+|+++|+|++..+.+|.. +..++..+++++
T Consensus 212 ~t~e~~~~~~~v~~-p~~g~lt~~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~-~~~~~~~a~~~a 289 (385)
T TIGR02445 212 TTVESLAALRPAFD-PKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSI-MGYGPVPATQKA 289 (385)
T ss_pred CCHHHHhcCCceec-CCCCceecccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcc-cchhHHHHHHHH
Confidence 89999999999983 5 67799999999999999999999999999998899999999997665543 445778999999
Q ss_pred HHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
|+++|++++|||++|+||+|++++++.+|+|| ||++|. .| ||++||++++|||+||||++++.+++
T Consensus 290 l~~AGi~p~DId~~Ei~daFa~~~l~~~e~lg---~~~~g~--------~~---vN~~GG~la~GhP~GATG~r~v~~l~ 355 (385)
T TIGR02445 290 LKRAGLSISDIDVFELNEAFAAQALPCLKDLG---LLDKMD--------EK---VNLNGGAIALGHPLGCSGARISTTLL 355 (385)
T ss_pred HHHcCCCHHHcCEEEEccccHHHHHHHHHHcC---CCCCCC--------CC---cCCCCchhhcCCCccccHHHHHHHHH
Confidence 99999999999999999999999999999999 888752 36 99999999999999999999999999
Q ss_pred HHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 437 NRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 437 ~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+.|+.+.+++||+++|++||+|+++|||+.
T Consensus 356 ~~l~~~~~~~Gl~~~~~g~g~g~a~~~e~~ 385 (385)
T TIGR02445 356 NLMEQKDATFGLATMCIGLGQGIATVFERV 385 (385)
T ss_pred HHHHhcCCCeEEEEEecccChhheEEEEeC
Confidence 666556678999999999999999999973
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-65 Score=522.23 Aligned_cols=372 Identities=34% Similarity=0.555 Sum_probs=321.7
Q ss_pred CceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCC
Q psy1213 47 KNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~ 124 (472)
+++|||+++||||+++ .+.+.+.++.+|+.+|+++||+++|+.+++||.+++|++.++.. ++++++.++..+|++...
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~ 81 (391)
T PRK07661 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV 81 (391)
T ss_pred CcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc
Confidence 5799999999999985 55667889999999999999999998889999999998876543 367888899999997459
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+||+.|+..|++.|++|.+|++||+|+|+||+.|+... .. + .. ..+..
T Consensus 82 p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~-~~-------------~-----~~----~~~~~ 138 (391)
T PRK07661 82 PAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGH-VV-------------R-----PN----PRLVE 138 (391)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCcccc-cc-------------C-----CC----ccccc
Confidence 99999999999999999999999999999999999999998774210 00 0 00 00000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-------------cceee
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-------------DKTIS 270 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-------------~~~~~ 270 (472)
..| .....|++.+++|+++||+|||++++|+++||+||..|+++|+|+ ++.|.... +..++
T Consensus 139 ~~~-----~~~~~m~~~a~~~~~~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~ 213 (391)
T PRK07661 139 AAP-----EYYMGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFS 213 (391)
T ss_pred ccc-----chhhhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEe
Confidence 001 001247999999999999999999999999999999999999886 57776542 13467
Q ss_pred ccCCCcc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccH
Q psy1213 271 KDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGP 349 (472)
Q Consensus 271 ~de~~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~ 349 (472)
.||.+|+ ++.|.+.+++|+|. +.|++|.+|||+++|||+|+||+|++.|++++.+|+++|+|++....+|.. +..++
T Consensus 214 ~d~~~rp~~~~e~l~~l~p~f~-~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~-~~~~~ 291 (391)
T PRK07661 214 QDEGVRADTTLEILGKLRPAFN-VKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEV-MGIGP 291 (391)
T ss_pred cCCCCCCCCCHHHHhcCCCCcC-CCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcc-cchHH
Confidence 8999987 89999999999984 679999999999999999999999999999999999999999998776643 45577
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~ 429 (472)
..++++||++|||+++|||++|+||+|+++++..+|+|| ||+ .| ||++||++++|||+||||+
T Consensus 292 ~~a~~~al~~agl~~~did~~ei~d~f~~~~l~~~e~lg---~~~-----------~~---vN~~GG~~a~Ghp~gasG~ 354 (391)
T PRK07661 292 IAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELG---LDE-----------EK---VNVNGGAIALGHPLGCTGA 354 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCCHHHHHHHHHHHHcC---CCC-----------CC---CCCCCChHHhCCcHHHHHH
Confidence 899999999999999999999999999999999999999 554 24 9999999999999999999
Q ss_pred HHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 430 RLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 430 ~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++++|+++||+.+.+++||+++|++||+|.++|||+
T Consensus 355 ~~~~el~~qL~~~~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 355 KLTLSLIHEMKRRNEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEccccChhhEEEEEe
Confidence 999999999998888999999999999999999997
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-65 Score=523.82 Aligned_cols=385 Identities=36% Similarity=0.566 Sum_probs=323.1
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
++++|||+++|||+|+.+.+.++++.+|+.+|+++||+|+|+++++||.+++++..+....++++..++..+|++...++
T Consensus 2 ~~v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~ 81 (393)
T PRK05790 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPA 81 (393)
T ss_pred CceEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCce
Confidence 57999999999999866666789999999999999999999999999999999877654455667778888899645799
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCc
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL 206 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (472)
++++.+|+|++.+|.+|+++|++|.+|++||+|+|++|+.|..... .+. .. ..+. ....+.+..
T Consensus 82 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~-~~~-----~~--~~~~-~~~~~~~~~------- 145 (393)
T PRK05790 82 LTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPG-SRW-----GQ--KMGD-VELVDTMIH------- 145 (393)
T ss_pred eeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccc-ccc-----cc--ccCc-chhhhhhcc-------
Confidence 9999999999999999999999999999999999999987642110 000 00 0000 000000000
Q ss_pred ccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec---cce--eeccCCCcc-CC
Q psy1213 207 PAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG---DKT--ISKDNGVRV-ST 279 (472)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~---~~~--~~~de~~~~-~t 279 (472)
+..+++..+..|++.+++||++||+|||++++|++++|+||.+|+++|.|+ +++|.+.. +++ ++.|+.++. .+
T Consensus 146 ~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~ 225 (393)
T PRK05790 146 DGLTDAFNGYHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTT 225 (393)
T ss_pred cccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCC
Confidence 000111123579999999999999999999999999999999999999887 48898763 222 367888875 88
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLER 359 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~ 359 (472)
.|.+.+++|+| .|.|++|.+|||+++|||+++||+|+|.|++++.+|+++|+|++.....|.. ...++..++++||++
T Consensus 226 ~e~l~~~~~v~-~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~-~~~~~~~a~~~a~~~ 303 (393)
T PRK05790 226 AESLAKLRPAF-DKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAI-MGIGPVPAIRKALEK 303 (393)
T ss_pred HHHHhCCCCcc-CCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCc-cchhHHHHHHHHHHH
Confidence 99999999998 4678999999999999999999999999999999898899999998765542 345678899999999
Q ss_pred cCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHH
Q psy1213 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 360 Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
||++++|||++|+||+|++++++.+|+|| ||+ .| ||++||++++|||+||||+++++|+++||
T Consensus 304 Agi~~~did~~e~~d~f~~~~l~~~e~lg---~~~-----------~p---vN~~GG~l~~Ghp~gatG~~~~~e~~~qL 366 (393)
T PRK05790 304 AGWSLADLDLIEINEAFAAQALAVEKELG---LDP-----------EK---VNVNGGAIALGHPIGASGARILVTLLHEM 366 (393)
T ss_pred cCCCHHHCCEEEeCcHHHHHHHHHHHHhC---CCh-----------hh---cCCCcchhhhCcchhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999 765 46 99999999999999999999999999999
Q ss_pred hhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 440 VREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 440 ~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|++.+++||+++|++||+|+++|||+.
T Consensus 367 ~~~~~~~gl~~~~~~~g~g~~~~~e~~ 393 (393)
T PRK05790 367 KRRGAKKGLATLCIGGGQGVALIVERP 393 (393)
T ss_pred HhcCCCeEEEEEeccCCceeEEEEEcC
Confidence 999999999999999999999999974
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-65 Score=519.19 Aligned_cols=376 Identities=39% Similarity=0.609 Sum_probs=323.7
Q ss_pred CCceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHH-cCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSD 122 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~-agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~ 122 (472)
|+++||||++||||+++ .+.+.+.++.+|+.++++++|++ +|+++++||.+++|+..+... ++++++.++..+|++.
T Consensus 1 M~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~ 80 (387)
T PRK08947 1 MEDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPH 80 (387)
T ss_pred CCcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCC
Confidence 35899999999999984 56677899999999999999995 799999999999998765444 3678888999999975
Q ss_pred CCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCC
Q psy1213 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFF 202 (472)
Q Consensus 123 ~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (472)
..|+++|+++|+||+.++..|++.|++|.+|++||+|+|+||+.|........ + .+. +.+
T Consensus 81 ~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~-----------~-----~~~----~~~ 140 (387)
T PRK08947 81 SVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFH-----------P-----GLS----KNV 140 (387)
T ss_pred CCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcc-----------h-----hhh----hhc
Confidence 69999999999999999999999999999999999999999987642110000 0 000 000
Q ss_pred CCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc-----ceeeccCCCc
Q psy1213 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD-----KTISKDNGVR 276 (472)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~-----~~~~~de~~~ 276 (472)
. . .+..|++.+++|+++||+|||++++|+++||+||..|+++|+|+ |+.|+...+ +.++.|+.+|
T Consensus 141 ----~---~--~~~~~~~~a~~~~~~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r 211 (387)
T PRK08947 141 ----A---K--AAGMMGLTAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIR 211 (387)
T ss_pred ----c---c--cchHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCc
Confidence 0 0 12479999999999999999999999999999999999999996 588876521 2356788887
Q ss_pred c-CCHHHHhcCCCcccCC-CCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHH
Q psy1213 277 V-STPEQMAKLKPAFVKP-HGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATP 354 (472)
Q Consensus 277 ~-~t~~~~~~~~p~~~~~-~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~ 354 (472)
. +|.|+|++++|++. | .|.+|.+|||+++|||+|+||+|++.|++++.+|++||+|++..+.++.. +..++..+++
T Consensus 212 ~~~t~e~~~~~~~v~~-p~~g~lt~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~-~~~~~~~a~~ 289 (387)
T PRK08947 212 PETTVEALAALRPAFD-PVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSI-MGYGPVPATQ 289 (387)
T ss_pred CCCCHHHHhcCCceee-CCCCcEEccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCccc-ccccHHHHHH
Confidence 5 89999999999983 4 56699999999999999999999999999998898999999997655543 4456789999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
++|+++|++++|||++|+||+|++++++.+|+|| ||++++ .| +|++||++++|||+||||++++++
T Consensus 290 ~al~~Agl~~~DId~~El~d~F~~~~l~~~e~lg---~~~~~~--------~~---vN~~GG~la~GhP~GAtG~~~v~~ 355 (387)
T PRK08947 290 KALKRAGLSISDIDVFELNEAFAAQSLPCLKDLG---LLDKMD--------EK---VNLNGGAIALGHPLGCSGARISTT 355 (387)
T ss_pred HHHHHcCCCHHHCCEEEecccchHHHHHHHHHcC---CCCCCC--------CC---cCCCCchhhcCCCccccHHHHHHH
Confidence 9999999999999999999999999999999999 888753 35 999999999999999999999999
Q ss_pred HHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 435 AANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 435 ~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++||+++.+++||+++|++||+|+++|||+.
T Consensus 356 l~~~L~~~~~~~gl~~~~~g~G~g~a~~~e~~ 387 (387)
T PRK08947 356 LLNLMERKDAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_pred HHHHHHhcCCCEEEEEEeecccceeEEEEEeC
Confidence 99999998889999999999999999999973
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-65 Score=525.31 Aligned_cols=377 Identities=33% Similarity=0.524 Sum_probs=321.8
Q ss_pred CceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCC-ChHHHHHHHHcCCCCCC
Q psy1213 47 KNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT-SNIGREAALSAGFSDKT 124 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~-~~~a~~ia~~lGl~~~~ 124 (472)
++|||||+++|||+++ .+.+.+.++.+|+.+|+++||+|+|++++|||.+++|+..+.+.. ++.++.++..+|++...
T Consensus 46 ~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~ 125 (452)
T PLN02287 46 DDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETV 125 (452)
T ss_pred CCEEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCc
Confidence 4899999999999984 445568999999999999999999999999999999988765543 44667888999997458
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+||+.++..|++.|++|.+|++||+|+|+||+.|...... ++..... +
T Consensus 126 pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~--------------------~~~~~~~-~-- 182 (452)
T PLN02287 126 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGG--------------------VNPRVES-F-- 182 (452)
T ss_pred ceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccc--------------------cCchhhc-c--
Confidence 9999999999999999999999999999999999999999876421000 0000000 0
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc----------ceeeccC
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD----------KTISKDN 273 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~----------~~~~~de 273 (472)
+...++ ..+|++.+++||++||+|||++++|++++|+||..++++|+|+ ++.|+.... ..++.||
T Consensus 183 --~~~~~~--~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De 258 (452)
T PLN02287 183 --SQAQDC--LLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDD 258 (452)
T ss_pred --cccccc--CcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccC
Confidence 000011 2359999999999999999999999999999999999998776 577876421 1577899
Q ss_pred CCcc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHH
Q psy1213 274 GVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYA 352 (472)
Q Consensus 274 ~~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a 352 (472)
.+|+ ++.+++.+++|+|. |+|++|.+|||+++|||+|+||+|++.|++++.+|++++.+++....+|.. +..++..+
T Consensus 259 ~~r~~~~~e~l~~l~~v~~-~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~A 336 (452)
T PLN02287 259 GIRPNTTLADLAKLKPVFK-KNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAV-MGIGPAVA 336 (452)
T ss_pred CCCCCCCHHHHhcCCCccC-CCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccCCCcc-chHHHHHH
Confidence 9986 78999999999984 779999999999999999999999999999998888899998876555543 45567899
Q ss_pred HHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHH
Q psy1213 353 TPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLT 432 (472)
Q Consensus 353 ~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v 432 (472)
+++||++|||+++|||++|+||+|++++++.+|+|| ||+ .| ||++||++++|||+||||++++
T Consensus 337 ~~~al~~Agl~~~DID~~Ei~daFa~~~l~~~e~lG---~~~-----------~p---vN~sGG~la~GHp~gAsG~~~v 399 (452)
T PLN02287 337 IPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLG---LDP-----------EK---VNVNGGAIALGHPLGATGARCV 399 (452)
T ss_pred HHHHHHHcCCCHHHCCEEEecchHHHHHHHHHHHcC---CCc-----------cc---cCCCCcHHhccCcHHHHHHHHH
Confidence 999999999999999999999999999999999999 654 25 9999999999999999999999
Q ss_pred HHHHHHHhhccC--CcchhhhhccCcceeEEEEEeCCCC
Q psy1213 433 VHAANRLVREDG--QFGLIAACAAGGQGVGMIIERHPDA 469 (472)
Q Consensus 433 ~e~v~qL~~~~g--~~gl~~~~~~GG~~~a~~l~~~~~~ 469 (472)
+++++||+.+.+ ++||+++|++||+|.++|||+.|+.
T Consensus 400 ~~l~~qL~~~~~~~~~gl~~~c~ggG~g~a~~ie~~~~~ 438 (452)
T PLN02287 400 ATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDSV 438 (452)
T ss_pred HHHHHHHHhcCCCCCeeEEEEccccCceeEEEEEecCch
Confidence 999999998877 8999999999999999999998764
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-64 Score=512.97 Aligned_cols=384 Identities=31% Similarity=0.440 Sum_probs=332.9
Q ss_pred CCceEEEeccccccc--c-cCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCC
Q psy1213 46 GKNIVFVDGVRTPFL--L-SGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFS 121 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~--~-~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~ 121 (472)
|+++|||++.||||+ + .++.+.+.++.+|+..+++.+|+++++++++||.||+|++.+... +++++++++...|+|
T Consensus 1 m~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp 80 (417)
T PRK06025 1 MAEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYD 80 (417)
T ss_pred CCceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCC
Confidence 357999999999998 8 478899999999999999999999999999999999999987765 589999999999999
Q ss_pred CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCC
Q psy1213 122 DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDF 201 (472)
Q Consensus 122 ~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (472)
..+|+++||..|+||+.||.+|++.|++|++|++|++|+|+||+.|+......+ + +......+ .
T Consensus 81 ~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~-----~------~~~~~~~~-----~ 144 (417)
T PRK06025 81 IKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMA-----A------GKPPLGMG-----S 144 (417)
T ss_pred CCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccc-----C------CCCccccc-----c
Confidence 899999999999999999999999999999999999999999999962110000 0 00000000 0
Q ss_pred CCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc--ceeeccCCCcc-
Q psy1213 202 FIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD--KTISKDNGVRV- 277 (472)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~--~~~~~de~~~~- 277 (472)
+ .+.+.+......|++.+++++++||+|||++|+|+++||++|.+|+++|+|+ |++|+...+ ..++.||.+|+
T Consensus 145 ~---~~~~~~~~~~~~Mg~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~ 221 (417)
T PRK06025 145 G---NLRLRALHPQSHQGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQ 221 (417)
T ss_pred c---CcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCC
Confidence 0 0111121123579999999999999999999999999999999999999996 589986211 24789999997
Q ss_pred CCHHHHhcCCCcccC-------CCCc------------------eeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEE
Q psy1213 278 STPEQMAKLKPAFVK-------PHGS------------------VTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLR 332 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~-------~~g~------------------l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~ 332 (472)
+|.|.|.+++|+|.+ ++|. +|..|||+++|||+|+||+|++.|++++.+|+++|.
T Consensus 222 ~t~e~la~L~p~F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~ 301 (417)
T PRK06025 222 TTAEGLAALKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIV 301 (417)
T ss_pred CCHHHHcCCCCCccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEE
Confidence 899999999999953 4677 899999999999999999999999999999999999
Q ss_pred EeEEeccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcC
Q psy1213 333 DFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFN 412 (472)
Q Consensus 333 g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN 412 (472)
|++..+++|.. +..++..+++++|+++|++++|||+||+||+|+.+.+..++.+| ++..++|
T Consensus 302 g~~~a~~~p~~-~~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~~~lg-----------------~~~~~vN 363 (417)
T PRK06025 302 AMANMGDDPTL-MLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLD-----------------LDRDKVN 363 (417)
T ss_pred EEEEecCCchh-hcccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHHHHHHcC-----------------CChhhcc
Confidence 99998876653 56678899999999999999999999999999999999999999 4556699
Q ss_pred CCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 413 NWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 413 ~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++||++++|||+|+||+++++++++||+.+.+++||+..|++||+|+|+|||+.
T Consensus 364 ~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~g~~~Gl~~~c~~GG~g~A~lle~~ 417 (417)
T PRK06025 364 VNGGAIALGHPIGATGSILIGTVLDELERRGLKRGLVTMCAAGGMAPAIIIERV 417 (417)
T ss_pred ccCCHHhcCCchhHHHHHHHHHHHHHHHHhCCCeEEEEEEeeccceeEEEEEeC
Confidence 999999999999999999999999999988888999999999999999999983
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-64 Score=513.98 Aligned_cols=380 Identities=41% Similarity=0.632 Sum_probs=320.7
Q ss_pred EEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee
Q psy1213 50 VFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV 129 (472)
Q Consensus 50 ~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v 129 (472)
+|+|+++|||+++.+.++++++.+|+.+|+++||+|+|+++++||.+++++..+++..+.++..++..+|++.+.|+++|
T Consensus 1 ~Ivg~~~Tpf~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v 80 (386)
T cd00751 1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTV 80 (386)
T ss_pred CEEEeecCCccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhh
Confidence 58999999999976666789999999999999999999999999999999877766667788889999999634799999
Q ss_pred cccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccc
Q psy1213 130 TMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAV 209 (472)
Q Consensus 130 ~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (472)
+.+|+|++.+|..|+++|++|.+|+|||+|+|++|+.+......... . . .+.....++.+ +..
T Consensus 81 ~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~------~---~------~~~~~~~~~~~--~~~ 143 (386)
T cd00751 81 NRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRG------G---R------LGLNTLDGMLD--DGL 143 (386)
T ss_pred ccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccc------c---c------cCccccccccc--ccc
Confidence 99999999999999999999999999999999998776432111100 0 0 00000000000 001
Q ss_pred cccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec----cceeeccCCCcc-CCHHHH
Q psy1213 210 AEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG----DKTISKDNGVRV-STPEQM 283 (472)
Q Consensus 210 ~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~----~~~~~~de~~~~-~t~~~~ 283 (472)
..+.....|++.+++||++||+|||++++|++++|+||..++..+.+. +++|+.+. +..++.++..|+ +|.|+|
T Consensus 144 ~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v 223 (386)
T cd00751 144 TDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKL 223 (386)
T ss_pred ccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHH
Confidence 111223568999999999999999999999999999999999888775 57888753 234555666765 899999
Q ss_pred hcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcCCC
Q psy1213 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLS 363 (472)
Q Consensus 284 ~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~ 363 (472)
++++|++ .|.||+|.+|||+++|||+++||+|++.|++++.+|+++|+|++...+.+.. ...++..++++||++|||+
T Consensus 224 ~~s~~i~-~p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~-~~~~~~~a~~~a~~~Agi~ 301 (386)
T cd00751 224 AKLKPAF-KKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAI-MGIGPVPAIPKALKRAGLT 301 (386)
T ss_pred hCCCCCc-CCCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcc-cchhHHHHHHHHHHHcCCC
Confidence 9999998 4567899999999999999999999999999999898999999998765543 4556789999999999999
Q ss_pred cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhcc
Q psy1213 364 LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRED 443 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~ 443 (472)
++|||++|+||+|++.+++.+|.|| ||+ +| +|++||++++|||+||+|+++++|+++|||+++
T Consensus 302 ~~did~~e~~d~f~~~~~~~~e~lg---~~~-----------~p---vn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~~ 364 (386)
T cd00751 302 LDDIDLIEINEAFAAQALACLKELG---LDP-----------EK---VNVNGGAIALGHPLGASGARIVVTLLHELKRRG 364 (386)
T ss_pred HHHcCEEEeechhHHHHHHHHHHhC---CCh-----------hh---cCCCcchHhhCccHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999 766 46 999999999999999999999999999999999
Q ss_pred CCcchhhhhccCcceeEEEEEe
Q psy1213 444 GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 444 g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+++||++.|++||+|+++|||+
T Consensus 365 ~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 365 GRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred CCEEEEEEcccccceEEEEEEC
Confidence 9999999999999999999996
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-63 Score=510.31 Aligned_cols=372 Identities=34% Similarity=0.541 Sum_probs=322.2
Q ss_pred CceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCC-ChHHHHHHHHcCCCCCC
Q psy1213 47 KNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT-SNIGREAALSAGFSDKT 124 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~-~~~a~~ia~~lGl~~~~ 124 (472)
++|||++++||||+++ ...+.++++.+|+.+|++++|+++|+++++||.+++|++.++... +++++.++..+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~ 81 (392)
T PRK07108 2 TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV 81 (392)
T ss_pred CcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC
Confidence 5799999999999985 455678899999999999999999999999999999999877653 46999999999997569
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+||+.||+.|+++|++|++|++||+|+|+||+.|....... .+ +.+...
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~------------~~------~~~~~~---- 139 (392)
T PRK07108 82 PGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHM------------LR------EGWLVE---- 139 (392)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcC------------cc------chhhhc----
Confidence 99999999999999999999999999999999999999998774210000 00 000000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec------------c--cee
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG------------D--KTI 269 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~------------~--~~~ 269 (472)
..+ +. ...|+..++++..+|+++|+++++|+..+|++|..|.++|+|+ |++|+... + ..+
T Consensus 140 ~~~---~~--~~~m~~~ae~~a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~ 214 (392)
T PRK07108 140 HKP---EI--YWSMLQTAENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTV 214 (392)
T ss_pred cCC---cc--ccCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeE
Confidence 000 00 0247888889999999999999999999999999999999997 47776431 1 236
Q ss_pred eccCCCcc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccccccc
Q psy1213 270 SKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLG 348 (472)
Q Consensus 270 ~~de~~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~ 348 (472)
++||.+|+ +|+|+|++++|+| +.+|+|.+|||+++|||+|+||+|++.|++++.+|+++|+|++....+|.. +..+
T Consensus 215 ~~de~~r~~~t~e~l~~l~~~~--~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~-~~~~ 291 (392)
T PRK07108 215 SADEGIRPDTTLEGVSKIRSAL--PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDE-MGIG 291 (392)
T ss_pred ccCCCCCCCCCHHHHhcCCCCC--CCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcc-cchh
Confidence 78888886 8999999999998 569999999999999999999999999999999999999999998776653 5567
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcH
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATG 428 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG 428 (472)
+..|+++||++|||+++|||++|+||+|++++++.+|+|| ||+ .| ||++||++++|||+|+||
T Consensus 292 ~~~a~~~al~~agl~~~Did~~ei~eafa~~~l~~~e~lg---~~~-----------~~---vN~~GG~~a~GHp~gatG 354 (392)
T PRK07108 292 PVFAVPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLG---IPM-----------DR---LNVNGGAIAVGHPYGVSG 354 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCchHhhhHHHHHHHHHHHhcC---CCc-----------cc---cCCCCChHHhCcchhhhH
Confidence 8899999999999999999999999999999999999999 654 24 999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 429 VRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 429 ~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++.++.++++|+.+.+++||+++|++||+|+++|||+
T Consensus 355 ~r~~~~l~~~l~~~~~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 355 ARLTGHALIEGKRRGAKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEEccccChhhEEEEEe
Confidence 9999999999998888999999999999999999997
|
|
| >KOG1392|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-64 Score=468.43 Aligned_cols=427 Identities=71% Similarity=1.096 Sum_probs=407.7
Q ss_pred cccccCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCC
Q psy1213 41 VKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGF 120 (472)
Q Consensus 41 ~~~~~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl 120 (472)
..+|+++.+++|.+.||||--.+..+.+.-+.||+.++....|++..++.+.+|.+|+|+++.+-...++++..+...|+
T Consensus 36 ~k~kn~~nivlvdgvrtpfl~sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agf 115 (465)
T KOG1392|consen 36 VKKKNMPNIVLVDGVRTPFLVSGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGF 115 (465)
T ss_pred ccccCCCceEEEecccCceeecccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCC
Confidence 44578999999999999999888788899999999999999999999999999999999999988889999999999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
+...|+-+|..+|-|+..|+..+..+|++|.+|+++++|+|.||++|++..+..|.-....+++...|.++.+..++...
T Consensus 116 sdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~n 195 (465)
T KOG1392|consen 116 SDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKN 195 (465)
T ss_pred CCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhh
Confidence 98999999999999999999999999999999999999999999999999888888888899999999999999999999
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceec-ccee-eccCCCccC
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVG-DKTI-SKDNGVRVS 278 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~-~~~~-~~de~~~~~ 278 (472)
++.|++|...+|+....||..+.|++..|.++|.++++|+.++|..|..|+++|+|.+.+|+.+. +++. .+|.++|+.
T Consensus 196 flapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftdvvpfkv~gkd~~t~kdngirvs 275 (465)
T KOG1392|consen 196 FLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTDVVPFKVDGKDPKTIKDNGIRVS 275 (465)
T ss_pred ccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccceeeEecCCCCcceecCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999984 4444 489999999
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~ 358 (472)
++|++.+++|.|.+|+|.+|..|.+-+.|||.|++++++|.|...|.+|.++++.|-+.+.+|.+....+|.+++.+.|+
T Consensus 276 sle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgpay~ipkll~ 355 (465)
T KOG1392|consen 276 SLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGPAYVIPKLLD 355 (465)
T ss_pred CHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheecccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999899988788899999999999
Q ss_pred HcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANR 438 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~q 438 (472)
.||++..|||.||+|+.|+.+.+..+.++..||||+.+.|+....|+.|.+++|.+||.+++|||.||||.+.+.....+
T Consensus 356 kagltlkdid~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~anr 435 (465)
T KOG1392|consen 356 KAGLTLKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHSANR 435 (465)
T ss_pred HcCCcccccchhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHHHhH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HhhccCCcchhhhhccCcceeEEEEEeCC
Q psy1213 439 LVREDGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 439 L~~~~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
|+.+.|++|++.+|..||+|.+|++|+-|
T Consensus 436 l~~e~gqygvvaacaaggqgvamlieayp 464 (465)
T KOG1392|consen 436 LKEEKGQYGVVAACAAGGQGVAMLIEAYP 464 (465)
T ss_pred HHhhcCceeEeehhhcCCcceEEEeeccC
Confidence 99999999999999999999999999865
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-62 Score=500.61 Aligned_cols=380 Identities=41% Similarity=0.675 Sum_probs=313.7
Q ss_pred EEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec
Q psy1213 51 FVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT 130 (472)
Q Consensus 51 Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~ 130 (472)
|||+++|||+++.+.+.+++..+|+.+|+++||+|+|++++|||.+++++..++...+.++..++..+|++...|+++++
T Consensus 1 IvG~~~tp~~~~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~ 80 (386)
T TIGR01930 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN 80 (386)
T ss_pred CcceecCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec
Confidence 68999999998665667899999999999999999999999999999998776655567788899999996348999999
Q ss_pred ccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCccccc
Q psy1213 131 MACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVA 210 (472)
Q Consensus 131 ~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (472)
++|+|++.+|..|+++|++|.+|++||+|+|++++.+.......+. .. ..+ .... ..++.+ +...
T Consensus 81 ~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~-----~~--~~~----~~~~--~~~~~~--~g~~ 145 (386)
T TIGR01930 81 RQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRRE-----GV--DPG----RFEL--EDQILK--DGLT 145 (386)
T ss_pred chhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcccccccccc-----cc--ccC----cccc--chhhcC--cccc
Confidence 9999999999999999999999999999999998765422100000 00 000 0000 000000 0111
Q ss_pred ccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-c---ceeeccCCCc-cCCHHHHh
Q psy1213 211 EFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-D---KTISKDNGVR-VSTPEQMA 284 (472)
Q Consensus 211 ~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~---~~~~~de~~~-~~t~~~~~ 284 (472)
++.....|++.+++||++||+|||++++|++++|+||..++++|.++ +++|.++. + ..+..|+..| ++|.|+|+
T Consensus 146 ~~~~~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~ 225 (386)
T TIGR01930 146 DPLNGLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLA 225 (386)
T ss_pred ccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHh
Confidence 11123569999999999999999999999999999999999999887 48998652 1 1234455555 48999999
Q ss_pred cCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcCCCc
Q psy1213 285 KLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSL 364 (472)
Q Consensus 285 ~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~ 364 (472)
+++|++ .|.+.+|++|||+++|||+|+||+|++.|++++.+|+++|.|++.....|.. ...+...++++||++||+++
T Consensus 226 ~s~~i~-~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~-~~~~~~~a~~~a~~~Agi~~ 303 (386)
T TIGR01930 226 KLKPAF-DPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEI-MGLGPVPAIPKALKKAGLSI 303 (386)
T ss_pred CCCCCc-CCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCcc-ccccHHHHHHHHHHHcCCCH
Confidence 999997 2444499999999999999999999999999999989999999997665543 34566899999999999999
Q ss_pred CCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccC
Q psy1213 365 SDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDG 444 (472)
Q Consensus 365 ~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g 444 (472)
+|||++|+||||++.+++.+|+|| | |++| ||++||++++|||+|++|+++++|+++|||++.+
T Consensus 304 ~did~~e~~d~fa~~~~~~~e~lG---~-----------~~~p---vn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~ 366 (386)
T TIGR01930 304 SDIDLFEINEAFAAQVLACIKELG---L-----------DLEK---VNVNGGAIALGHPLGASGARIVTTLLHELKRRGG 366 (386)
T ss_pred HHCCeeehcchhHHHHHHHHHHhC---C-----------Chhh---cCCCCChHhhCCcHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999 4 2256 9999999999999999999999999999999989
Q ss_pred CcchhhhhccCcceeEEEEE
Q psy1213 445 QFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 445 ~~gl~~~~~~GG~~~a~~l~ 464 (472)
++||+++|++||+|.++|||
T Consensus 367 ~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 367 RYGLATICIGGGQGIAVILE 386 (386)
T ss_pred CEEEEEEeccCCceEEEEeC
Confidence 99999999999999999986
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-62 Score=497.50 Aligned_cols=380 Identities=34% Similarity=0.488 Sum_probs=311.3
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCC-CCChHHHHHHHHcCCCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEV-KTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~-~~~~~a~~ia~~lGl~~~~ 124 (472)
|++++|||+++|||+++.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..... ..+++++.+....|++...
T Consensus 1 M~~v~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~ 80 (382)
T PRK07801 1 MAEAYIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV 80 (382)
T ss_pred CCceEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC
Confidence 357999999999999865555678999999999999999999999999999999763322 1245677666778886468
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|.++++++|+|++.++.+|++.|++|.+|++||+|+|+||+.|+...... .. ..+. ...... ...|
T Consensus 81 p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~-------~~--~~~~-~~~~~~--~~~~-- 146 (382)
T PRK07801 81 PGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTA-------GE--QLGF-TSPFAE--SKGW-- 146 (382)
T ss_pred ceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccc-------cc--cccC-Cccccc--Ccch--
Confidence 99999999999999999999999999999999999999987664110000 00 0000 000000 0000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceeccceeeccCCCccCCHHHH
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGDKTISKDNGVRVSTPEQM 283 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~~~~~~de~~~~~t~~~~ 283 (472)
+.| +++. ...+...+++||++||+|||++++|++++|+||..++++|+|. ++.|++. +..|+.++.+|.|++
T Consensus 147 ~~~--~g~~-~~~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~----~~~d~~~~~~t~e~~ 219 (382)
T PRK07801 147 LHR--YGDQ-EVSQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGG----VTVDEGPRETSLEKM 219 (382)
T ss_pred hhh--ccCC-CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccC----ccccCCcCcCCHHHH
Confidence 001 1111 1234446999999999999999999999999999999998884 5677763 567899999999999
Q ss_pred hcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcCCC
Q psy1213 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLS 363 (472)
Q Consensus 284 ~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~ 363 (472)
++++|++ +.+|+|.+|||+++|||+|+||+|+|.|++++.+|+++|.+++.....+. ....++..++++||++||++
T Consensus 220 ~~~~~i~--~~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~a~~~a~~~agi~ 296 (382)
T PRK07801 220 AGLKPLV--EGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPV-FMLTAPIPATRYALEKTGLS 296 (382)
T ss_pred hcCCCCC--CCCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChH-hhccChHHHHHHHHHHcCCC
Confidence 9999998 33799999999999999999999999999999888899999887654442 24556788999999999999
Q ss_pred cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhcc
Q psy1213 364 LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRED 443 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~ 443 (472)
++|||++|+||+|++++++.+|+|| ||++ | ||++||++++|||+||||+++++|+++||+++.
T Consensus 297 ~~did~~e~~d~Fa~~~~~~~e~lG---~~~~-----------p---vN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~~ 359 (382)
T PRK07801 297 IDDIDVVEINEAFAPVVLAWLKETG---ADPA-----------K---VNPNGGAIALGHPLGATGAKLMTTLLHELERTG 359 (382)
T ss_pred HHHcCEeeecccchHHHHHHHHHhC---CCch-----------h---cCCCcchhhhcCcHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999 6652 4 999999999999999999999999999999998
Q ss_pred CCcchhhhhccCcceeEEEEEeC
Q psy1213 444 GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 444 g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
.++||+++|++||++.++||++.
T Consensus 360 ~~~gl~~~~gggg~~~~~vl~~~ 382 (382)
T PRK07801 360 GRYGLQTMCEGGGTANVTIIERL 382 (382)
T ss_pred CCEEEEEEcccccceeEEEEEeC
Confidence 89999999999999999999874
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-61 Score=497.13 Aligned_cols=385 Identities=31% Similarity=0.498 Sum_probs=319.3
Q ss_pred ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee
Q psy1213 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 48 ~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~ 127 (472)
+++|||+++|||+++.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+......++++++.++..+|++.+.|++
T Consensus 2 ~v~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~ 81 (394)
T PLN02644 2 DVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICT 81 (394)
T ss_pred cEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceE
Confidence 68999999999998665667899999999999999999999999999999998654333456777889999997568999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+|+++|+|++.++.+|++.|++|.+|++||+|+|+||+.|.... ..+. .. ..+. ....+.... +
T Consensus 82 ~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~-~~~~-----~~--~~~~-~~~~~~~~~-------~ 145 (394)
T PLN02644 82 TVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLP-EARK-----GS--RLGH-DTVVDGMLK-------D 145 (394)
T ss_pred EEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCccccc-cccc-----cc--cccc-chhhhhccc-------c
Confidence 99999999999999999999999999999999999997664211 0000 00 0000 000000000 0
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec---cce---eeccCCCccCCH
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG---DKT---ISKDNGVRVSTP 280 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~---~~~---~~~de~~~~~t~ 280 (472)
..+.+.....|++.+++||++||+|||++++|++++|+++..+++.+.|+ +++|..+. +++ ++.||.++..++
T Consensus 146 ~~~~~~~~~~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~ 225 (394)
T PLN02644 146 GLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDP 225 (394)
T ss_pred ccccccCCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCH
Confidence 00111112458999999999999999999999999999999999987775 57787653 332 667888887889
Q ss_pred HHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHc
Q psy1213 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERA 360 (472)
Q Consensus 281 ~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~A 360 (472)
+.+..++|+|.+++|.+|.+|||+++|||+++||++++.|++++.+|+++|+|++...+.+.. ...++..++++||+++
T Consensus 226 ~~l~~l~p~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~-~~~~~~~a~~~al~~A 304 (394)
T PLN02644 226 AKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPEL-FTTAPALAIPKALKHA 304 (394)
T ss_pred HHHhCCCCcccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcc-cchhHHHHHHHHHHHc
Confidence 999999999964368999999999999999999999999999999898999999987654432 3456678999999999
Q ss_pred CCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHh
Q psy1213 361 GLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLV 440 (472)
Q Consensus 361 gl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~ 440 (472)
|++++|||++|+||+|++++++.+|+|| ||+ .| ||++||++++|||+||||+++++|+++|||
T Consensus 305 gi~~~Did~~Ei~d~f~~~~l~~~e~lg---~~~-----------~~---vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 305 GLEASQVDYYEINEAFSVVALANQKLLG---LDP-----------EK---VNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred CCCHHHCCEEEeCcHHHHHHHHHHHHhC---CCc-----------cc---cCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 654 24 999999999999999999999999999999
Q ss_pred hccCCcchhhhhccCcceeEEEEEeC
Q psy1213 441 REDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 441 ~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++.++++|++.|++||+|.++|||+-
T Consensus 368 ~~~~~~g~~~~~~~gg~g~a~~~e~~ 393 (394)
T PLN02644 368 SKNGKYGVAGICNGGGGASAIVVELM 393 (394)
T ss_pred hcCCCeEEEEEeccCCceeEEEEEec
Confidence 99999999999999999999999974
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-61 Score=498.53 Aligned_cols=392 Identities=34% Similarity=0.517 Sum_probs=316.2
Q ss_pred CceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHc-CCCcCccCEEEEEeecCCC-CCChHHHHHHHHcCCCCC
Q psy1213 47 KNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQEV-KTSNIGREAALSAGFSDK 123 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~a-gi~~~~Id~vi~g~~~~~~-~~~~~a~~ia~~lGl~~~ 123 (472)
.+++|||+++|||+++ ++.+.+.++.+|+.+|+++||+|+ |+++++||.+++|+..+.. .++++++.++..+|++ .
T Consensus 2 ~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~ 80 (406)
T PRK07851 2 PEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-F 80 (406)
T ss_pred CcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-C
Confidence 4799999999999984 456678999999999999999997 9999999999999765432 2356788999999995 6
Q ss_pred CceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhh----HHHHHhhccCCCchhhhhhhhccCC
Q psy1213 124 TPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKM----RSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 124 ~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
.|+++|+++|+||..++..|++.|++|.+|++||+|+|+||..+....... ...+.. ...+.........
T Consensus 81 ~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 154 (406)
T PRK07851 81 LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAE------AQARTAARAEGGA 154 (406)
T ss_pred CCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhh------ccccccccccccc
Confidence 899999999999999999999999999999999999999987653111000 000000 0000000000000
Q ss_pred CCCCCCccccc--ccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc-ceeeccCCC
Q psy1213 200 DFFIPELPAVA--EFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD-KTISKDNGV 275 (472)
Q Consensus 200 ~~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~-~~~~~de~~ 275 (472)
..| +.|... .+.....|++.+++|+++||+++++|++|++++|++|..|.+++++. +++|+..-. ..++.|+.+
T Consensus 155 ~~~--~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~ 232 (406)
T PRK07851 155 EAW--HDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGP 232 (406)
T ss_pred ccc--cccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCc
Confidence 000 001000 01112457889999999999999999999999999999999999775 467764311 134556666
Q ss_pred cc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHH
Q psy1213 276 RV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATP 354 (472)
Q Consensus 276 ~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~ 354 (472)
|. +|.|++++++|++ +|++.+|++|||+++|||+|+||+|+|.|++++.+|++||+|++.....|. ....+...+++
T Consensus 233 r~~~t~e~v~~s~~v~-~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~-~~~~~~~~a~~ 310 (406)
T PRK07851 233 RAGTTYEKVSQLKPVF-RPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPE-IMGLGPVEASK 310 (406)
T ss_pred cCCcCHHHHhcCCCcc-CCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCC-ccchhHHHHHH
Confidence 64 8999999999997 466669999999999999999999999999999999899999998766553 24456789999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
+||++||++++|||++|+||+|++++++.+|+|| ||+ .| +|++||++++|||+|+||+++++|
T Consensus 311 ~al~~Agi~~~did~~ei~d~f~~~~l~~le~lg---~~~-----------~p---vN~~GG~l~~Ghp~gasg~~~~~~ 373 (406)
T PRK07851 311 QALARAGMSIDDIDLVEINEAFAAQVLPSARELG---IDE-----------DK---LNVSGGAIALGHPFGMTGARITTT 373 (406)
T ss_pred HHHHHhCCCHHHCCeehhhhHHHHHHHHHHHHhC---CCc-----------cc---cCCCCChHhhcCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 776 25 999999999999999999999999
Q ss_pred HHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 435 AANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 435 ~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++||+.+.+++||+++|++||+|+++|||+.
T Consensus 374 ~~~qL~~~~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 374 LLNNLQTHDKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred HHHHHHhcCCCeEEEEEccccChhhEEEEEec
Confidence 99999988889999999999999999999985
|
|
| >KOG1390|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-63 Score=464.98 Aligned_cols=387 Identities=33% Similarity=0.549 Sum_probs=349.9
Q ss_pred cCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~ 124 (472)
.+++++||++.|||++.+++.+...+..+|..-|++.||+++.+++.+++-||+|++.+...+++++++.+.-.|||..+
T Consensus 4 ~~k~V~IVsaARTPIGsF~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv 83 (396)
T KOG1390|consen 4 SSKDVFIVSAARTPIGSFRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSV 83 (396)
T ss_pred CCCceEEEeeccccccccccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcce
Confidence 34599999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
++++||-.|+||+.|+.+|++.|+.|..|+++++|.|+||+.|+.... |. ....|. ..+.|.+.
T Consensus 84 ~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~--R~-------g~~~G~-~~l~Dgi~------ 147 (396)
T KOG1390|consen 84 PATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVA--RG-------GVKYGG-VQLVDGIV------ 147 (396)
T ss_pred eeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhh--cc-------CcCcCC-eeeeechh------
Confidence 999999999999999999999999999999999999999999943211 10 011111 11222222
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-c---ceeeccCCCcc-C
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-D---KTISKDNGVRV-S 278 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~---~~~~~de~~~~-~ 278 (472)
.-+++|.....+||..+++...+|+||||++|.|++.+++++..|+++|.|+ |+.|..+. + ..+++||.++. .
T Consensus 148 -~DGL~D~y~~~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~ 226 (396)
T KOG1390|consen 148 -KDGLTDAYDKCHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGS 226 (396)
T ss_pred -hcchHHHhccCCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhccc
Confidence 2344677777899999999999999999999999999999999999999997 58998873 2 46789998887 8
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~ 358 (472)
+.+.+.+++|+|-++++++|..|.+.+.|||||+||+|.+.++++|++|+++|++|+.+..+|.+ +..+|..++.++|+
T Consensus 227 ~~~~~~~l~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~d-f~iaP~laipk~lk 305 (396)
T KOG1390|consen 227 NIEKLSKLRPVFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPID-FTIAPALAIPKALK 305 (396)
T ss_pred chhhhccccceeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhh-cccchHHHHHHHHH
Confidence 99999999999988889999999999999999999999999999999999999999999888876 67889999999999
Q ss_pred HcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANR 438 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~q 438 (472)
+|||..+|||+||+++.|+...+..+..|| +++++||++||..++|||+|+||++.++.+++.
T Consensus 306 ~aG~~~sdVd~~EiNEAFs~v~lA~iK~Lg-----------------ldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~ 368 (396)
T KOG1390|consen 306 KAGLEQSDVDYWEINEAFSVVVLANIKKLG-----------------LDPSKVNVHGGAVALGHPLGMSGARILVTLLHT 368 (396)
T ss_pred HcCcchhhhhHHhhhhhhhHHHHHHHHHhC-----------------CCHhhccCCCceeecCCCcCCcchhHHHHHHHH
Confidence 999999999999999999999999999999 688999999999999999999999999999999
Q ss_pred HhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 439 LVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 439 L~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|+.+.+++|++..|++||.+++|++++.
T Consensus 369 L~~~~g~~GvAaiCnGGGgasa~viekl 396 (396)
T KOG1390|consen 369 LEQKGGKIGVAAICNGGGGASAMVIEKL 396 (396)
T ss_pred HHhhCCceeEEEEecCCCceeeEEEecC
Confidence 9999999999999999999999999973
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-61 Score=482.67 Aligned_cols=356 Identities=31% Similarity=0.510 Sum_probs=311.0
Q ss_pred ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee
Q psy1213 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 48 ~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~ 127 (472)
++||++++||||+++.+.+.+.++.+|+..|++++++ |++ ++||.+++|++.+. +.++++.++..+|++...|++
T Consensus 2 ~v~Ivg~~rTpfg~~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~--~~~~~r~~~~~~Gl~~~~p~~ 76 (361)
T PRK06690 2 RAVIVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP--GGNVARLSALEAGLGLHIPGV 76 (361)
T ss_pred cEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC--cchHHHHHHHHcCCCCCCCce
Confidence 6899999999999987778889999999999999854 896 89999999988654 367788899999997679999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+|+++|+||+.++..|++.|++|++|++|++|+|+||+.|+... . + +. .+.
T Consensus 77 tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~--~--------~----------~~---~~~------ 127 (361)
T PRK06690 77 TIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNR--A--------R----------FS---PET------ 127 (361)
T ss_pred ehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccc--c--------c----------cC---ccc------
Confidence 99999999999999999999999999999999999998774210 0 0 00 000
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCcc-CCHHHH-h
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRV-STPEQM-A 284 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~-~t~~~~-~ 284 (472)
+.. ..|++.+++|+++||+|||+++.|+..+|+|+..|.+|++|++ +.|+.- ++ |+.+|+ +++|++ .
T Consensus 128 ----~~~-~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~----~~-d~~~r~~~~~e~ll~ 197 (361)
T PRK06690 128 ----IGD-PDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFNG----LL-DESIKKEMNYERIIK 197 (361)
T ss_pred ----ccC-ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceecccC----cc-ccccCCCCCHHHHhh
Confidence 001 2399999999999999999999999999999999999999974 677651 55 777775 789999 5
Q ss_pred cCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcCCCc
Q psy1213 285 KLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSL 364 (472)
Q Consensus 285 ~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~ 364 (472)
+++|+|. |.+++|.+|||+++|||+|+||+|++.|++++.+|.++|.+++....+|.. +..++..+++++|+++|+++
T Consensus 198 ~l~p~~~-~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~-~~~~~~~a~~~al~~Agl~~ 275 (361)
T PRK06690 198 RTKPAFL-HNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNL-PGTGPIFAVNKLLNEMNMKV 275 (361)
T ss_pred cCCCccc-CCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCccc-chhHHHHHHHHHHHHcCCCH
Confidence 5689884 678999999999999999999999999999999998899999887655543 45677899999999999999
Q ss_pred CCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccC
Q psy1213 365 SDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDG 444 (472)
Q Consensus 365 ~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g 444 (472)
+|||++|+||+|++++++.+|.|| | +..++|++||++++|||+|+||+++++++++||+.+.+
T Consensus 276 ~Did~~ei~eafa~~~~~~~e~lg---l--------------~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~~ 338 (361)
T PRK06690 276 EDIDYFEINEAFASKVVACAKELQ---I--------------PYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKREDM 338 (361)
T ss_pred HHcCEeeecchhHHHHHHHHHhcC---C--------------CchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999 4 34459999999999999999999999999999998888
Q ss_pred CcchhhhhccCcceeEEEEEeC
Q psy1213 445 QFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 445 ~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++|++++|++||+|.++|||+.
T Consensus 339 ~~g~~~~c~~gG~g~a~~~e~~ 360 (361)
T PRK06690 339 KYGIATLGIGGGIGLALLFEKV 360 (361)
T ss_pred CEEEEEEcccCcceeEEEEEec
Confidence 9999999999999999999985
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-60 Score=491.82 Aligned_cols=350 Identities=20% Similarity=0.214 Sum_probs=285.0
Q ss_pred cccccccCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHH-HHHH
Q psy1213 39 KSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGRE-AALS 117 (472)
Q Consensus 39 ~~~~~~~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~-ia~~ 117 (472)
..++++.|++|+|||+++|||+++ ..+.+..+|+.+|+++||+|+|+++++||.+++++....+.++++++. ++..
T Consensus 8 ~~~~~~~m~~VaIvG~g~Tpfgr~---~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~ 84 (430)
T PRK06365 8 QLKMKKKSRDVYMVAAGVTKFDKA---SPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDY 84 (430)
T ss_pred cchhhhhccCEEEEEeeecCcccc---CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHh
Confidence 345666678999999999999973 245778999999999999999999999999888765544333444544 5799
Q ss_pred cCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhcc
Q psy1213 118 AGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATI 197 (472)
Q Consensus 118 lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (472)
+|++ ..|+++|+++|+|+..+|.+|++.|++|.+|+|||+|+|+++..++...... . . ...+..
T Consensus 85 lGl~-~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~----~--~---------~~~d~~ 148 (430)
T PRK06365 85 LGLV-PKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEF----I--A---------LASDTN 148 (430)
T ss_pred cCCC-CCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhh----h--c---------cccccc
Confidence 9997 5899999999999999999999999999999999999999987664311100 0 0 000100
Q ss_pred CCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCcc
Q psy1213 198 RPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRV 277 (472)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~ 277 (472)
| +.|. +...+..|++.+++|+++||+|+|++++|++++|+||.+ ||+++++++
T Consensus 149 ----~--~~~~--g~~~~~~~al~a~ry~~~yG~t~e~la~vav~~~~~A~~----------NP~A~~~~~--------- 201 (430)
T PRK06365 149 ----F--DYPL--GGFYTGYYAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIH----------NPFAQSPMK--------- 201 (430)
T ss_pred ----c--cccc--cCccHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhh----------CcHhhcCCC---------
Confidence 0 0110 111124589999999999999999999999999999987 899876544
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc--CCccc-----------
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ--DPKDQ----------- 344 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~--~p~~~----------- 344 (472)
+|+|+|++++++. +|+|++|||+++|||+|+||+|+|.|++++.+| ++|++++.... ++...
T Consensus 202 ~t~e~v~~s~~i~----~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~ 276 (430)
T PRK06365 202 ITVEDVRKSPMVS----YPLTRLDVCAMSDGAACAILASEDKAFEITDKP-VLIKAIGTGSDTLRLADRPFGEVPLLPNE 276 (430)
T ss_pred CCHHHHhcCCccc----cCcchhhcCCcCCceEEEEEecHHHHHhcCCCC-eEEEEEEEecccccccccccccccccccc
Confidence 4789999998886 789999999999999999999999999998776 68888776543 11100
Q ss_pred --------------ccccHHHHHHHHHHHcCCC--cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCc
Q psy1213 345 --------------LLLGPAYATPQVLERAGLS--LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSS 401 (472)
Q Consensus 345 --------------~~~~~~~a~~~Al~~Agl~--~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~ 401 (472)
.....+.++++||++|||+ ++|||++|+||||++++++.+|+|| ||++|+ |.+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lG---l~~~Ge~~~~~~~G~~~ 353 (430)
T PRK06365 277 SPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLG---LCKYGEGGQFIESGKPE 353 (430)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHHHHcC---CCCCCchHHHHHCCCcC
Confidence 0012257999999999998 8999999999999999999999999 999987 5778
Q ss_pred cCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCC
Q psy1213 402 KVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQ 445 (472)
Q Consensus 402 ~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~ 445 (472)
++|++| ||++||++++|||+||||+++++|+++|||++++.
T Consensus 354 ~~G~~p---iNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~~ 394 (430)
T PRK06365 354 LPGKLP---VNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIKK 394 (430)
T ss_pred CCCCcc---ccCCCchhcCCCcccHHHHHHHHHHHHHHhcccCC
Confidence 899999 99999999999999999999999999999998753
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-60 Score=487.90 Aligned_cols=346 Identities=20% Similarity=0.243 Sum_probs=286.9
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
++++|||++.|||+++ .+.++.+|+.+|+++||+|+|+++++||.+++++..+......++..++..+|++ ..+.
T Consensus 1 ~~v~IvG~g~t~~~~~----~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~ 75 (385)
T PRK12578 1 RRVAVIGVGNSKFGRR----DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVP 75 (385)
T ss_pred CceEEEeecccceeec----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCe
Confidence 4789999999999984 4788999999999999999999999999999998766443456788899999997 5778
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCc
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL 206 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (472)
++|+++|+|++.+|..|+..|++|.+|++||+|+|++|+.+....... +... .+..+.. .
T Consensus 76 ~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~-------------~~~~--~~~~~~~-----~ 135 (385)
T PRK12578 76 LRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAI-------------GGRG--GNYQWEY-----H 135 (385)
T ss_pred eEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhh-------------cccc--ccccccc-----c
Confidence 999999999999999999999999999999999999987653211000 0000 0000000 0
Q ss_pred ccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcC
Q psy1213 207 PAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKL 286 (472)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~ 286 (472)
| .++..+..+++.+++||++||+|+|++++|++++|++|.. ||.++++++ +++++++++
T Consensus 136 ~--~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~----------np~a~~~~~---------i~~e~v~~s 194 (385)
T PRK12578 136 F--YGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGAM----------NPKAHFQKP---------VTVEEVLKS 194 (385)
T ss_pred c--CCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhc----------CChhhcCCC---------CCHHHHhcC
Confidence 1 1122234578899999999999999999999999999987 787776544 478999999
Q ss_pred CCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCC-----ccccc-ccHHHHHHHHHHHc
Q psy1213 287 KPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDP-----KDQLL-LGPAYATPQVLERA 360 (472)
Q Consensus 287 ~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p-----~~~~~-~~~~~a~~~Al~~A 360 (472)
+++. .|+|++|||+++|||+|+||+|++.|++++.++.+||+|++...+.. .+... .++..++++||++|
T Consensus 195 ~~i~----~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~A 270 (385)
T PRK12578 195 RAIS----WPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMA 270 (385)
T ss_pred CccC----CCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHc
Confidence 8886 68999999999999999999999999999877779999999864311 11112 24578999999999
Q ss_pred CCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 361 GLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 361 gl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
|++++|||++|+||||++++++.+|+|| ||++|+ |.+.++|++| ||++||++++|||+||||+++++
T Consensus 271 gi~~~DiD~~ei~d~ft~~~l~~le~lG---l~~~G~~~~~~~~G~~~~~G~~p---vN~~GG~la~GhP~gatG~~~v~ 344 (385)
T PRK12578 271 KVTPNDIEVATVHDAFTIAEIMGYEDLG---FTEKGKGGKFIEEGQSEKGGKVG---VNLFGGLKAKGHPLGATGLSMIY 344 (385)
T ss_pred CCCHHHCCEEEecCcChHHHHHHHHHcC---CCCCCchHHHHHCCCccCCCCee---eCCCCCcccCCCCccHHHHHHHH
Confidence 9999999999999999999999999999 999987 5668899999 99999999999999999999999
Q ss_pred HHHHHHhhccCCcch
Q psy1213 434 HAANRLVREDGQFGL 448 (472)
Q Consensus 434 e~v~qL~~~~g~~gl 448 (472)
|+++|||++++.+|+
T Consensus 345 e~~~qLrg~ag~~qv 359 (385)
T PRK12578 345 EITKQLRDEAGKLQQ 359 (385)
T ss_pred HHHHHHhCCcccCcC
Confidence 999999998775544
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-60 Score=488.33 Aligned_cols=362 Identities=16% Similarity=0.148 Sum_probs=296.9
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~ 124 (472)
+++++|||+++|||+++ +.++.+|+.+|+++||+|+|+++++||.+++++..+... .+..+..++..+|++ ..
T Consensus 3 ~~~v~Ivg~~~t~~~r~-----~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~ 76 (399)
T PRK06059 3 PEPVYILGAGMHPWGKW-----GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GA 76 (399)
T ss_pred CCcEEEEEecccccCCC-----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CC
Confidence 46899999999999973 467899999999999999999999999999887665432 234568899999995 67
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
+.++++.+|+|++.+|.+|+++|++|.+|++||+|+|+++...+... . +... .+. ++..
T Consensus 77 ~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~--~-------------~~~~--~~~---~~~~- 135 (399)
T PRK06059 77 PVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPV--G-------------GERP--DDP---DWLR- 135 (399)
T ss_pred ceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCccc--c-------------cccc--ccc---chhh-
Confidence 89999999999999999999999999999999999999874211100 0 0000 000 0000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHh
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMA 284 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~ 284 (472)
..| .++..+..|++.+++||++||+|+|+++.+++++|++|.. ||.++.+++ +|+|+|+
T Consensus 136 ~~~--~g~~~~~~~al~a~~~~~~yg~s~e~~a~v~~~~~~~a~~----------Np~A~~r~~---------~t~e~v~ 194 (399)
T PRK06059 136 FHL--IGATNPVYFALLARRRMDLYGATVEDFAQVKVKNARHGLL----------NPNARYRKE---------VTVEDVL 194 (399)
T ss_pred ccc--CCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcc----------CcHhhcCCC---------CCHHHHh
Confidence 001 1222235699999999999999999999999999998764 898886544 4899999
Q ss_pred cCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHc--CCCCcEEEEEeEEeccC-Cc---cc--cc-------cc-
Q psy1213 285 KLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQL--GLKPKAYLRDFVYVSQD-PK---DQ--LL-------LG- 348 (472)
Q Consensus 285 ~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~--g~~~~a~I~g~~~~~~~-p~---~~--~~-------~~- 348 (472)
+++|++ +|++++|||+++|||+|+||+|++.|+++ +.++.+||+|++..... +. .. .. ..
T Consensus 195 ~s~~i~----~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 270 (399)
T PRK06059 195 ASPVVS----DPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAP 270 (399)
T ss_pred cCCccc----CCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEeccccccccccccccccccccccccc
Confidence 999997 68999999999999999999999999999 66677999999886421 10 00 11 11
Q ss_pred ----HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCC
Q psy1213 349 ----PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGS 417 (472)
Q Consensus 349 ----~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~ 417 (472)
.+.+++++|++||++++|||++|+||||++++++.+|+|| ||++|+ |.+..+|++| ||++||+
T Consensus 271 ~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~~~l~~~e~lG---l~~~G~~~~~~~~G~~~~~G~~p---vN~~GG~ 344 (399)
T PRK06059 271 ERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLG---LCPKGEAEALLRSGATTLGGRIP---VNPSGGL 344 (399)
T ss_pred ccHHHHHHHHHHHHHcCCCHHHCcEEeecccChHHHHHHHHHcC---CCCCCcHHHHHHCCCccCCCCee---ecCCCcc
Confidence 2468999999999999999999999999999999999999 999986 5678899999 9999999
Q ss_pred ccccCCCCCcHHHHHHHHHHHHhhccC-------CcchhhhhccCcceeEEEEEe
Q psy1213 418 LSIGHPFAATGVRLTVHAANRLVREDG-------QFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 418 ~a~Ghp~gasG~~~v~e~v~qL~~~~g-------~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+++|||+|+||+++++|+++|||++++ +++|+++++++|.+.++||+|
T Consensus 345 la~Ghp~gatG~~~~~e~~~qLrg~ag~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 345 ACFGEAIPAQAIAQVCELTWQLRGQAGGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred ccCCccCCccHHHHHHHHHHHhccCcCCccCCCccEEEEeccCCcccceEEEecC
Confidence 999999999999999999999999754 578888888888999999986
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-59 Score=483.32 Aligned_cols=343 Identities=22% Similarity=0.290 Sum_probs=282.9
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
++++|||+++|||+++ .+.++.+|+.+++++||+|+|+++++||.+++|+....+........++..+|++ ..++
T Consensus 7 ~~v~IvG~g~tp~~~~----~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~ 81 (398)
T PRK06157 7 DKVAILGMGCTKFGER----WDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPV 81 (398)
T ss_pred CCeEEEEecccccccc----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCE
Confidence 5899999999999974 4688999999999999999999999999999998654321122345678899997 5899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCc
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL 206 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (472)
.+|+.+|+|++.+|++|+..|++|++|++||+|+|++++.++...... . .+ ..+ + .
T Consensus 82 ~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~----------~-~~------~~~----~---~ 137 (398)
T PRK06157 82 TRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVA----------N-PG------TLA----D---M 137 (398)
T ss_pred EEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccccccc----------c-cc------cch----h---c
Confidence 999999999999999999999999999999999999987664211000 0 00 000 0 0
Q ss_pred ccccccccCCchhHHHHHHHHHhCCCHHHH----HHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHH
Q psy1213 207 PAVAEFSSGETMGHSADRLAAAFKVSRKEQ----DEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQ 282 (472)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~----~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~ 282 (472)
|. ..+..+..|++.+++||++||+|+|++ ++|++++|+||.+ ||.++.+++ +|.|+
T Consensus 138 ~~-~~~~~~~~~al~a~~~~~~yG~t~e~~~~~~a~vav~~~~~A~~----------np~A~~r~~---------~t~e~ 197 (398)
T PRK06157 138 TM-PNVTAPGNFAQLASAYAAKYGVSREDLKRAMAHVSVKSHANGAR----------NPKAHLRKA---------VTEEQ 197 (398)
T ss_pred cc-ccCchHHHHHHHHHHHHHHhCCCHHHHcccccHHHHHHHHHHhc----------CChhhcCCC---------CCHHH
Confidence 00 011112458899999999999999999 8999999999986 798876544 47999
Q ss_pred HhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCC-------ccc-ccccHHHHHH
Q psy1213 283 MAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDP-------KDQ-LLLGPAYATP 354 (472)
Q Consensus 283 ~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p-------~~~-~~~~~~~a~~ 354 (472)
|++++|++ +|++++|||+++|||+|+||+|++.|++++.++.+||+|++...... .+. ....+..+++
T Consensus 198 v~~s~~v~----~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~ 273 (398)
T PRK06157 198 VLKAPMIA----GPLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAAR 273 (398)
T ss_pred HhcCCccc----CCCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccHHHHHHHH
Confidence 99999997 68999999999999999999999999999875668999998864311 111 1112467999
Q ss_pred HHHHHcCCC--cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCC
Q psy1213 355 QVLERAGLS--LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFA 425 (472)
Q Consensus 355 ~Al~~Agl~--~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~g 425 (472)
+||++|||+ ++|||++|+||+|++++++.+|+|| ||++|+ |.+.++|++| ||++||++++|||+|
T Consensus 274 ~a~~~AGl~~~~~Did~~Ei~D~Fs~~~l~~~e~lG---l~~~Ge~~~~~~~g~~~~~G~~p---vN~~GG~la~Ghp~g 347 (398)
T PRK06157 274 KAYREAGITDPREELSMAEVHDCFSITELVTMEDLG---LSERGQAWRDVLDGFFDADGGLP---CQIDGGLKCFGHPIG 347 (398)
T ss_pred HHHHHcCCCCchhcCCEEEEecCChHHHHHHHHHcC---CCCCCchHHHHHCCCccCCCCee---ecCCCCcccCCCccc
Confidence 999999998 7999999999999999999999999 999997 5667889999 999999999999999
Q ss_pred CcHHHHHHHHHHHHhhccCCcch
Q psy1213 426 ATGVRLTVHAANRLVREDGQFGL 448 (472)
Q Consensus 426 asG~~~v~e~v~qL~~~~g~~gl 448 (472)
|||+++++|+++|||++++.+|+
T Consensus 348 atG~~~~~e~~~QLrg~ag~rQv 370 (398)
T PRK06157 348 ASGLRMLYEMYLQLLGRAGERQL 370 (398)
T ss_pred HhHHHHHHHHHHHhcccccCccC
Confidence 99999999999999999875554
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-59 Score=479.84 Aligned_cols=342 Identities=20% Similarity=0.213 Sum_probs=282.9
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC--CChHHHHHHHHcCCCCCC
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK--TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~--~~~~a~~ia~~lGl~~~~ 124 (472)
++++|||++.|||+++ .+++..+|+.+|+++||+|+|++++|||.+++++. ++.. .+..+..++..+|+. ..
T Consensus 9 ~~vaIvG~g~t~~~~~----~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~~-~~ 82 (392)
T PRK06065 9 KRVAVIGAGLTLFRRR----LLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGGI-RK 82 (392)
T ss_pred CceEEEEecccCCcCC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCCC-CC
Confidence 4899999999999984 46889999999999999999999999999999863 2221 244677899999985 58
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
+.++|+++|+|+..+|..|+++|++|.+|+|||+|+|+++.... ..... +. ...+.+ +
T Consensus 83 ~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~-~~~~~---~~------------~~~~~~----~-- 140 (392)
T PRK06065 83 PVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARP-HPQAV---FR------------YIWDPI----L-- 140 (392)
T ss_pred CeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeeccccccc-chhHH---Hh------------hhccch----h--
Confidence 99999999999999999999999999999999999999864311 00000 00 000111 1
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHh
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMA 284 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~ 284 (472)
+.| .++..+..|++.+++||++||+++|+++++++++|+||.+ ||.+++++++ |.|+++
T Consensus 141 ~~p--~g~~~~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~----------NP~A~~r~~l---------t~e~vl 199 (392)
T PRK06065 141 EKP--LNPNLIWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALN----------NPYAQLGSKI---------TVEDVL 199 (392)
T ss_pred ccC--CCccHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhcc----------CchhhhcCCC---------CHHHHh
Confidence 011 1222234689999999999999999999999999999987 8999876554 899999
Q ss_pred cCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc-----ccccccHHHHHHHHHHH
Q psy1213 285 KLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK-----DQLLLGPAYATPQVLER 359 (472)
Q Consensus 285 ~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~-----~~~~~~~~~a~~~Al~~ 359 (472)
+++||. +|+|++|||+++|||+|+||+|+|.|++++.+| +||.|++...+... .....+++.++++||++
T Consensus 200 ~s~~ia----~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ 274 (392)
T PRK06065 200 KSEVLV----WPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKM 274 (392)
T ss_pred cCCccc----CCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCccccccccccccHHHHHHHHHHHHH
Confidence 999997 899999999999999999999999999998766 79999988643211 11122347899999999
Q ss_pred cCCCc--CCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCCCcHHH
Q psy1213 360 AGLSL--SDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVR 430 (472)
Q Consensus 360 Agl~~--~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~ 430 (472)
||+++ +|||++|+||||++++++.+|+|| ||++|+ |.+.++|++| ||++||++++|||+||||++
T Consensus 275 aGi~~p~~diD~~ei~D~Fs~~~l~~~E~lG---~~~~G~~~~~~~~g~~~~~G~~p---vN~~GG~la~Ghp~gatG~~ 348 (392)
T PRK06065 275 AGIERPRKEIDVAEPYDPFDYKELHHLEGLQ---LAKRGEAPKLLKEGVFDIDGDIP---SSPSGGLLGVGNPIAAAGLM 348 (392)
T ss_pred cCCCCchhhCcEEEecCCChHHHHHHHHHcC---CCCCCcHHHHHHCCCccCCCCee---ecCCCccccCCCCccHHHHH
Confidence 99985 999999999999999999999999 999997 5667889999 99999999999999999999
Q ss_pred HHHHHHHHHhhccCCcch
Q psy1213 431 LTVHAANRLVREDGQFGL 448 (472)
Q Consensus 431 ~v~e~v~qL~~~~g~~gl 448 (472)
+++|+++|||++++.+|+
T Consensus 349 ~~~e~~~QLrg~ag~rQv 366 (392)
T PRK06065 349 KVISIYWQLKGTAGKMQV 366 (392)
T ss_pred HHHHHHHHHhccccCCcC
Confidence 999999999999775544
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-59 Score=475.02 Aligned_cols=357 Identities=19% Similarity=0.202 Sum_probs=285.9
Q ss_pred cCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcC-CCc-CccCEEEEEeecCCCC-CChHHHHHHHHcCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTG-ISK-DLIDYIVYGTVIQEVK-TSNIGREAALSAGFS 121 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~ag-i~~-~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~ 121 (472)
.|++++|||++.|||+++ .++++..+|+.+|+++||+|+| +++ +|||.+++++. ..+. .......++..+|+.
T Consensus 2 ~~~~vaIvG~g~t~~~~~---~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~~ 77 (385)
T PRK06066 2 FLNRVAIVGIGWYGFRPT---TPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGGA 77 (385)
T ss_pred CCCcEEEEEeeecCCcCC---CCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHcccC
Confidence 577999999999999964 2468899999999999999999 997 79999988642 1111 111223466788884
Q ss_pred CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCC
Q psy1213 122 DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDF 201 (472)
Q Consensus 122 ~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (472)
..|.+.+ |+|+..++.+|+..|++|.+|+|||+|+|+++..... ... . + ...+. .+
T Consensus 78 -~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~--~~~----~--------~---~~~~~---~~ 133 (385)
T PRK06066 78 -MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTF--SDV----V--------K---FAMDP---IY 133 (385)
T ss_pred -CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccch--hhh----h--------h---cccCc---ce
Confidence 4677776 8999999999999999999999999999988652110 000 0 0 00010 01
Q ss_pred CCCCcccccccccCC-chhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCH
Q psy1213 202 FIPELPAVAEFSSGE-TMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTP 280 (472)
Q Consensus 202 ~~~~~~~~~~~~~~~-~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~ 280 (472)
. .| .++..+. .|++.+++||++||+|+|+++++++++|+||.+ ||.+++++++ |.
T Consensus 134 ~---~p--~g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~----------NP~A~~r~~~---------t~ 189 (385)
T PRK06066 134 V---RP--IGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLS----------NPRASYASNI---------SL 189 (385)
T ss_pred e---cc--cCCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhc----------CChhhcCCCC---------CH
Confidence 1 11 1222223 569999999999999999999999999999987 8999876554 89
Q ss_pred HHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc----CCcccccccH--HHHHH
Q psy1213 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ----DPKDQLLLGP--AYATP 354 (472)
Q Consensus 281 ~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~----~p~~~~~~~~--~~a~~ 354 (472)
|+|+++++|. +|+|++|||+++|||+|+||+|++.|++++.+| +||+|++...+ .+.+ +...+ +.|++
T Consensus 190 edvl~S~~ia----~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~p-v~I~g~g~~~~~~~~~~~~-~~~~~~~~~Aa~ 263 (385)
T PRK06066 190 EDVLSSEYVV----YPLTELDIAPFVDGAIVVVLASEEVAKKLTDDP-VWIKGIGWSTESSNLETAE-LGKANYMRIAAD 263 (385)
T ss_pred HHHhcCCccc----CCchhhccCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCCccccccc-ccccHHHHHHHH
Confidence 9999999996 799999999999999999999999999998877 59999988643 2222 22223 47999
Q ss_pred HHHHHcCCC--cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCC
Q psy1213 355 QVLERAGLS--LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFA 425 (472)
Q Consensus 355 ~Al~~Agl~--~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~g 425 (472)
+||++|||+ ++|||++|+||+|++++++.+|+|| ||++|+ |.+.++|++| ||++||++++|||+|
T Consensus 264 ~a~~~AGi~~p~~DiD~~ei~D~Ft~~~l~~~e~lG---~~~~Ge~~~~v~~G~~~~~G~~P---vN~~GG~la~Ghp~g 337 (385)
T PRK06066 264 MAYKMAGIESPRKEVDAAEVDDRYSYKELQHIEALR---LSEEPEKDSLLREGNFDPQGELP---VNPSGGHLAKGVPLE 337 (385)
T ss_pred HHHHHcCCCCCHHHCcEEEEecCChHHHHHHHHHcC---CCCCCchHHHHHCCCCCCCCCcc---ccCCCchhcCCCccc
Confidence 999999998 7999999999999999999999999 999987 5778999999 999999999999999
Q ss_pred CcHHHHHHHHHHHHhhccCCcc------hhhhhcc--CcceeEEEEEe
Q psy1213 426 ATGVRLTVHAANRLVREDGQFG------LIAACAA--GGQGVGMIIER 465 (472)
Q Consensus 426 asG~~~v~e~v~qL~~~~g~~g------l~~~~~~--GG~~~a~~l~~ 465 (472)
+||+++++|+++|||++++.+| |+++.++ |+.+.++||||
T Consensus 338 atG~~~v~e~~~QL~g~Ag~rQ~~a~~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 338 ASGLSLLLDAVEYLRGEAGARQGKAERAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred hhHHHHHHHHHHHHcccccccCCCCcEEEEcCCCccCCccEEEEEEeC
Confidence 9999999999999999987766 7764332 24567888885
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-59 Score=478.84 Aligned_cols=358 Identities=18% Similarity=0.155 Sum_probs=292.5
Q ss_pred CCceEEEecccccc-cccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC--CChHHHHHHHHcCCCC
Q psy1213 46 GKNIVFVDGVRTPF-LLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK--TSNIGREAALSAGFSD 122 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~-~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~--~~~~a~~ia~~lGl~~ 122 (472)
|++++|||+++|+| +++ .++++.+|+.+|+++||+|+|+++++||.+++++ .++.. ...++..++..+|++
T Consensus 2 ~~~v~IvG~g~t~~~~~~----~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~- 75 (386)
T PRK08313 2 KRLAAVLGTGQTKYVAKR----QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGAT- 75 (386)
T ss_pred CCcEEEEEeecCCcCccC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCC-
Confidence 56899999999999 553 4678999999999999999999999999999986 33321 124557899999995
Q ss_pred CCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCC
Q psy1213 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFF 202 (472)
Q Consensus 123 ~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (472)
..++++++++|+++..++..|+++|++|.+|+|||+|+|+++..... + ... .+. .+.
T Consensus 76 ~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~----~-------~~~---------~~~---~~~ 132 (386)
T PRK08313 76 GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAM----W-------ALS---------IPV---PFT 132 (386)
T ss_pred CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccc----c-------ccc---------ccc---ccc
Confidence 67899999999999999999999999999999999999998653110 0 000 000 011
Q ss_pred CCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHH
Q psy1213 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQ 282 (472)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~ 282 (472)
.| .++..+..|++.+++||++||+++|+++++++++|++|.+ ||+++++++ +.|.|+
T Consensus 133 ---~~--~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~----------NP~A~~r~~--------~~t~e~ 189 (386)
T PRK08313 133 ---KP--VGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAK----------NPYAHLHQP--------DITLEK 189 (386)
T ss_pred ---cc--cccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHcc----------CcHHhcCCC--------CCCHHH
Confidence 11 1222345689999999999999999999999999999987 899997643 147999
Q ss_pred HhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc-----ccccccHHHHHHHHH
Q psy1213 283 MAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK-----DQLLLGPAYATPQVL 357 (472)
Q Consensus 283 ~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~-----~~~~~~~~~a~~~Al 357 (472)
|++++|+. .|+|++|||+++|||+|+||+|+|.|++++.+|.+||+|++...+... .....+.+.++++||
T Consensus 190 v~~s~~ia----~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~ 265 (386)
T PRK08313 190 VMASQMLW----DPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALW 265 (386)
T ss_pred HhcCCccc----CCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHHHHHHHHHH
Confidence 99999996 689999999999999999999999999998888889999998643211 112334578999999
Q ss_pred HHcCCC--cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCCCcH
Q psy1213 358 ERAGLS--LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFAATG 428 (472)
Q Consensus 358 ~~Agl~--~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG 428 (472)
++||++ ++|||++|+||||++++++.+|+|| ||++|+ |.+.++|++| ||++||+++ |||.|+||
T Consensus 266 ~~Agi~~p~~Did~~el~d~F~~~~~~~~e~lG---l~~~G~~~~~~~~G~~~~~G~~p---vN~~GG~l~-g~p~gatG 338 (386)
T PRK08313 266 KAAGITDPRDEIDVAEIYVPFSWFEPMWLENLG---FAPEGEGWKLTEAGETAIGGRLP---VNPSGGVLS-SNPIGASG 338 (386)
T ss_pred HHcCCCCChhhCCEEEeccCChHHHHHHHHHcC---CCCCCchHHHHHCCCcCCCCCcc---ccCCCcccc-cCCCcHHH
Confidence 999998 6999999999999999999999999 999987 5778999999 999999999 99999999
Q ss_pred HHHHHHHHHHHhhccCC-------cchhhhhccCc-ceeEEEEEeC
Q psy1213 429 VRLTVHAANRLVREDGQ-------FGLIAACAAGG-QGVGMIIERH 466 (472)
Q Consensus 429 ~~~v~e~v~qL~~~~g~-------~gl~~~~~~GG-~~~a~~l~~~ 466 (472)
+.+++|+++|||++++. ++|+++.++.+ .++++||++.
T Consensus 339 ~~~~~e~~~qlrG~ag~rQv~~a~~~l~~~~Gg~~~~~~~~v~~~~ 384 (386)
T PRK08313 339 MIRFAEAALQVMGKAGEHQVDGARKALGHAYGGGSQFFSMWVVGSE 384 (386)
T ss_pred HHHHHHHHHHhcccccCCcCCCccEEEEeccCCcceEEEEEEEecC
Confidence 99999999999998765 44455433222 2456666654
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-59 Score=479.80 Aligned_cols=350 Identities=21% Similarity=0.225 Sum_probs=285.7
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
.+++|||+++|||+++ +++++.+|+.+|+++||+|+|+++++||.+++++... ..++..++..+|++ ..+.
T Consensus 8 ~~vaIvG~g~t~~~~~----~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~----~~~~~~la~~lGl~-~~~~ 78 (384)
T PRK06158 8 GRTAIVGAATAGLGEA----PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD----ALWGLSVAEYLGIR-PRFV 78 (384)
T ss_pred CCEEEEEeeeccceeC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC----CCcHHHHHHHcCCC-Ceee
Confidence 4899999999999863 4788999999999999999999999999999986432 22345788999996 6788
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEE-eecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAG-GVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~-G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
++++.+|+|+..+|..|+++|++|.+|+|||+ |.|+++.... ... . . . ..++.
T Consensus 79 ~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~-~~~-~---------~---~-----~~~~~------- 132 (384)
T PRK06158 79 DGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGK-LRS-M---------L---D-----PQPYE------- 132 (384)
T ss_pred ccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCccc-ccc-c---------c---c-----ccchh-------
Confidence 89999999999999999999999999999987 6666542110 000 0 0 0 00010
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhc
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAK 285 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~ 285 (472)
.|. ..+.++..|++.+++||++||+|+|+++++++++|+||.. ||++++++++ |+|++++
T Consensus 133 ~~~-g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~----------NP~A~~~~~~---------t~e~vl~ 192 (384)
T PRK06158 133 APY-KPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQL----------NPEAFMRDPL---------TIDDVLA 192 (384)
T ss_pred ccc-CCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhc----------CchhhhCCCC---------CHHHHhc
Confidence 110 0122245689999999999999999999999999999986 8999876554 8999999
Q ss_pred CCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc-----ccccccHHHHHHHHHHHc
Q psy1213 286 LKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK-----DQLLLGPAYATPQVLERA 360 (472)
Q Consensus 286 ~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~-----~~~~~~~~~a~~~Al~~A 360 (472)
++||. +|+|++|||+++|||+|+||+|++.|++++.+| ++|.|++...+... +....+.+.++++||++|
T Consensus 193 s~~ia----~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~A 267 (384)
T PRK06158 193 ARMVS----DPLSVRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMA 267 (384)
T ss_pred CCccC----CCCchhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHc
Confidence 99996 799999999999999999999999999998766 89999987643111 112233467999999999
Q ss_pred CCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 361 GLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 361 gl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
|++++|||++|+||||++++++++|+|| ||++|+ |.+.++|++| ||++||++++||| |+||+++++
T Consensus 268 Gi~p~DId~~ElyD~Fs~~~l~~~E~lG---~~~~Ge~~~~~~~G~~~~~G~~P---vN~sGG~ls~Ghp-gatG~~~~~ 340 (384)
T PRK06158 268 GLTPADIDVVELYDAFTINTILFLEDLG---FCAKGEGGAFVEGGRIAPGGRLP---VNTNGGGLSCVHP-GMYGLFLLI 340 (384)
T ss_pred CCCHHHCcEEEecCCchHHHHHHHHHcC---CCCCCcHHHHHHCCCCccCCCcc---ccCCChhhcCCCC-chhhHHHHH
Confidence 9999999999999999999999999999 999997 5778899999 9999999999999 999999999
Q ss_pred HHHHHHhhccCCc-------chhhhhccCcc---eeEEEEEe
Q psy1213 434 HAANRLVREDGQF-------GLIAACAAGGQ---GVGMIIER 465 (472)
Q Consensus 434 e~v~qL~~~~g~~-------gl~~~~~~GG~---~~a~~l~~ 465 (472)
|+++|||++++++ +|+++ .||. ++++||++
T Consensus 341 E~~~QLrg~ag~rQv~~a~~gl~~~--~Gg~~~~~~~~vl~~ 380 (384)
T PRK06158 341 EAVRQLRGEAGERQVAGAEVALAHG--NGGVLSSQATAILGT 380 (384)
T ss_pred HHHHHHcCCCCCCcCCCCCEEEEEC--CCCcccceEEEEEec
Confidence 9999999997654 44553 3443 45677776
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-59 Score=481.83 Aligned_cols=353 Identities=21% Similarity=0.281 Sum_probs=279.8
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCC--ChH-HHHHHHHcCCCCC
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT--SNI-GREAALSAGFSDK 123 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~--~~~-a~~ia~~lGl~~~ 123 (472)
++++|||+++|||+|+. ...++++.+|+.+|+++||+|+|+++++||.+|+++..++... ... ........++. +
T Consensus 3 ~~v~Ivg~~~t~~~r~~-~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~-g 80 (403)
T PRK06289 3 DDVWVLGGYQSDFARNW-TKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALW-G 80 (403)
T ss_pred CcEEEEeCCcCcccccc-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCC-C
Confidence 47999999999999742 3357899999999999999999999999999999987654221 111 11112334553 4
Q ss_pred CceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC-CCCC
Q psy1213 124 TPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR-PDFF 202 (472)
Q Consensus 124 ~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 202 (472)
.|+++++++|+|+..+|..|+.+|++|++|+|||+|+|+++..|....... +. . ..+. ...+
T Consensus 81 ~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~---~~---~-----------~~~~~~~~~ 143 (403)
T PRK06289 81 VPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEH---LG---A-----------AAWTGHEGQ 143 (403)
T ss_pred CceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHh---hh---c-----------ccccccccc
Confidence 689999999999999999999999999999999999999987653211000 00 0 0000 0001
Q ss_pred CCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHH
Q psy1213 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQ 282 (472)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~ 282 (472)
..| +..+..|++.+++||++||+++|++++|++++|++|.+ ||.++.+..++. .+++.++
T Consensus 144 --~~~----~~~~~~~al~a~~y~~~yG~t~e~la~va~~~~~~A~~----------NP~A~~~~~~~~----~~~~~~d 203 (403)
T PRK06289 144 --DAR----FPWPSMFARVADEYDRRYGLDEEHLRAIAEINFANARR----------NPNAQTRGWAFP----DEATNDD 203 (403)
T ss_pred --cCC----CccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHcc----------CcHhhcCccccc----cccchhh
Confidence 001 11124589999999999999999999999999999986 898886544432 1357788
Q ss_pred HhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCC-CCcEEEEEeEEeccCCc----------c-cccccHH
Q psy1213 283 MAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGL-KPKAYLRDFVYVSQDPK----------D-QLLLGPA 350 (472)
Q Consensus 283 ~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~-~~~a~I~g~~~~~~~p~----------~-~~~~~~~ 350 (472)
++.++++. +|+|++|||+++|||+|+||+|+|.|++++. +|.+||+|++..+.... + .....+.
T Consensus 204 ~~~s~~i~----~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (403)
T PRK06289 204 DATNPVVE----GRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVR 279 (403)
T ss_pred hhcCCccc----CCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccccccccccccccccccHHHH
Confidence 98888874 7999999999999999999999999999986 67799999998643210 0 0122246
Q ss_pred HHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCC
Q psy1213 351 YATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHP 423 (472)
Q Consensus 351 ~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp 423 (472)
.|+++||++|||+++|||++|+||+|++++++.+|+|| ||++|+ |.+.++|++| ||++||++++|||
T Consensus 280 ~aa~~a~~~Agi~~~Didv~el~D~fa~~~l~~le~lG---l~~~Ge~~~~v~~G~~~~~G~lp---vN~~GG~la~Ghp 353 (403)
T PRK06289 280 QAVLDAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIG---LTGPGESWKAIENGEIAIGGRLP---INPSGGLIGGGHP 353 (403)
T ss_pred HHHHHHHHHcCCCHHHCeEEeeeccchHHHHHHHHHcC---CCCCCcHHHHHhcCCcccCCCee---EcCCCCccccCCC
Confidence 79999999999999999999999999999999999999 999998 4667889999 9999999999999
Q ss_pred CCCcHHHHHHHHHHHHhhccCCcch
Q psy1213 424 FAATGVRLTVHAANRLVREDGQFGL 448 (472)
Q Consensus 424 ~gasG~~~v~e~v~qL~~~~g~~gl 448 (472)
+|+||+++++|+++|||++++.+++
T Consensus 354 ~gatG~~~~~e~~~QLrg~ag~~Qv 378 (403)
T PRK06289 354 VGASGVRMLLDAAKQVTGTAGDYQV 378 (403)
T ss_pred ccchHHHHHHHHHHHHhccccCccC
Confidence 9999999999999999998765433
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-59 Score=478.49 Aligned_cols=348 Identities=21% Similarity=0.233 Sum_probs=283.1
Q ss_pred ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee
Q psy1213 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 48 ~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~ 127 (472)
+++|||+++|||+++. .+.+..+|+.+|+++||+|+|+++++||.+++|+..++... ...+...+|++ ..+++
T Consensus 2 ~v~IvG~~~t~~~~~~---~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~ 74 (391)
T PRK08256 2 KVFVAGVGMTPFEKPG---ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIV 74 (391)
T ss_pred cEEEEeccccccccCC---CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCc
Confidence 6899999999999632 35788999999999999999999999999999987664321 23466789995 57899
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+++++|+|++.+|.+|+++|++|++|++||+|+|+++..+.......+. ...+......+.+.. +
T Consensus 75 ~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-------~ 139 (391)
T PRK08256 75 NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRP--------SPLERFDKALAELQG-------F 139 (391)
T ss_pred ccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccccccccccccc--------chhhhhhhhhhhhcc-------c
Confidence 9999999999999999999999999999999999998654311000000 000000000001100 0
Q ss_pred ccccc-ccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcC
Q psy1213 208 AVAEF-SSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKL 286 (472)
Q Consensus 208 ~~~~~-~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~ 286 (472)
.++ .....|++.+++||++||+++|++++|++++|+||.. ||.++++++ +|.|+|+++
T Consensus 140 --~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~----------np~A~~~~~---------~t~e~~~~s 198 (391)
T PRK08256 140 --DPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARRHAAN----------NPYAQFRDE---------YTLEDVLAS 198 (391)
T ss_pred --ccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhc----------CChhhcCCC---------CCHHHHhcC
Confidence 001 1124689999999999999999999999999999987 787775543 589999999
Q ss_pred CCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccc---------cccHHHHHHHHH
Q psy1213 287 KPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQL---------LLGPAYATPQVL 357 (472)
Q Consensus 287 ~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~---------~~~~~~a~~~Al 357 (472)
+|++ +|+|++|||+++|||+|+||+|+|.|++++.++.++|.|++...+.+.... ...++.+++++|
T Consensus 199 ~~i~----~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~ 274 (391)
T PRK08256 199 PMIW----GPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVY 274 (391)
T ss_pred Cccc----CCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHH
Confidence 9997 689999999999999999999999999998778899999988765443211 112467999999
Q ss_pred HHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCCCcHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVR 430 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~ 430 (472)
+++|++++|||++|+||||++++++.+|+|| ||++|+ |.+.++|++| ||++||++++|||+||||++
T Consensus 275 ~~ag~~~~DiD~~ei~d~f~~~~l~~le~lg---~~~~Ge~~~~~~~G~~~~~G~~p---vN~~GG~ls~Ghp~gasG~~ 348 (391)
T PRK08256 275 EQAGIGPEDIDVVELHDCFSANELLTYEALG---LCPEGEAEKFIDDGDNTYGGRWV---VNPSGGLLSKGHPLGATGLA 348 (391)
T ss_pred HHcCCCHHHCCEEeeccCCcHHHHHHHHHcC---CCCCCchHHHHHCCCccCCCCee---eCCCCccccCCCCccHHHHH
Confidence 9999999999999999999999999999999 999987 6778999999 99999999999999999999
Q ss_pred HHHHHHHHHhhccCCcch
Q psy1213 431 LTVHAANRLVREDGQFGL 448 (472)
Q Consensus 431 ~v~e~v~qL~~~~g~~gl 448 (472)
+++|+++||+++++++|+
T Consensus 349 ~~~e~~~QL~g~ag~~Qv 366 (391)
T PRK08256 349 QCAELTWQLRGTAGARQV 366 (391)
T ss_pred HHHHHHHHhcCCcCCCcC
Confidence 999999999999876543
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-58 Score=472.97 Aligned_cols=367 Identities=22% Similarity=0.235 Sum_probs=286.8
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCC--ChHHHHHHHHcCCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT--SNIGREAALSAGFSDK 123 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~--~~~a~~ia~~lGl~~~ 123 (472)
|++|+|||+++|||+++ .++++.+|+.+|+++||+|+|+++++||.+++++..+.... ...+..+...+|+. .
T Consensus 1 ~~~v~Ivg~g~tpfgr~----~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~ 75 (389)
T PRK07516 1 MMTASIVGWAHTPFGKL----DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-F 75 (389)
T ss_pred CCcEEEEeCCcceeeec----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-C
Confidence 45899999999999983 57889999999999999999999999999999987543211 11222344566775 7
Q ss_pred CceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCC
Q psy1213 124 TPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFI 203 (472)
Q Consensus 124 ~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (472)
.|+++|+++|+|++.+|..|+++|++|.+|++||+|+|++|..|........ . .. .+....+
T Consensus 76 ~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~---~---~~-----------~~~~~~~- 137 (389)
T PRK07516 76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDIL---L---GA-----------SYLKEEG- 137 (389)
T ss_pred CceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHh---h---hc-----------ccccccc-
Confidence 8999999999999999999999999999999999999999877643211100 0 00 0000000
Q ss_pred CCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHH
Q psy1213 204 PELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQM 283 (472)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~ 283 (472)
..| ......|++.+++||++||+++|++++|++++|+||.. ||+++.+++++.++. .+.+
T Consensus 138 -~~~----~~~~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~----------nP~A~~~~~~t~~~~-----~~~~ 197 (389)
T PRK07516 138 -DTP----GGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVA----------NPYAQMRKDLGFEFC-----RTVS 197 (389)
T ss_pred -ccC----CCcHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc----------CChhhcCCcccHHhh-----hhhh
Confidence 011 01123599999999999999999999999999999987 799887665532211 1235
Q ss_pred hcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCC-----cccccccHHHHHHHHHH
Q psy1213 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDP-----KDQLLLGPAYATPQVLE 358 (472)
Q Consensus 284 ~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p-----~~~~~~~~~~a~~~Al~ 358 (472)
++++++. +|+|++|||+++|||+|+||+|++.|++++ ..+||.|++...+.. ......++..++++||+
T Consensus 198 ~~~~~i~----~pl~~~d~~~~~DGAaa~il~s~~~a~~~~--~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~ 271 (389)
T PRK07516 198 EKNPLVA----GPLRRTDCSLVSDGAAALVLADAETARALQ--RAVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALA 271 (389)
T ss_pred hcCCccc----CCCchhhcCCcCcceEEEEEecHHHHHhcC--CCEEEEEEEeccCcccccCCCccccHHHHHHHHHHHH
Confidence 6667664 789999999999999999999999999984 358999998864311 11123456789999999
Q ss_pred HcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCCCcHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRL 431 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~ 431 (472)
+||++++|||++|+||+|++++++.+|+|| ||++|+ |.+.++|++| ||++||++++|||+||||+++
T Consensus 272 ~agl~~~did~~e~~d~f~~~~~~~~e~lg---~~~~G~~~~~~~~g~~~~~g~~p---vN~sGG~la~Ghp~gasG~~~ 345 (389)
T PRK07516 272 QAGVTLDDLSFVETHDCFTIAELIEYEAMG---LAPPGQGARAIREGWTAKDGKLP---VNPSGGLKAKGHPIGATGVSM 345 (389)
T ss_pred HcCCCHHHCCEEEEecCCCHHHHHHHHHcC---CCCCCchHHHHHCCCccCCCCee---ecCCCCcccCCCCccHHHHHH
Confidence 999999999999999999999999999999 999986 5678899999 999999999999999999999
Q ss_pred HHHHHHHHhhccCCcch-------hhhhccCc-ceeEEEEEeCC
Q psy1213 432 TVHAANRLVREDGQFGL-------IAACAAGG-QGVGMIIERHP 467 (472)
Q Consensus 432 v~e~v~qL~~~~g~~gl-------~~~~~~GG-~~~a~~l~~~~ 467 (472)
++|+++|||++++.+|+ +++.++.| .++++||++.+
T Consensus 346 ~~e~~~QL~g~ag~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~~ 389 (389)
T PRK07516 346 HVLAAMQLTGEAGGMQIPGAKLAGVFNMGGAAVANYVSILERVK 389 (389)
T ss_pred HHHHHHHhcCCccCCcCCchheeeeeccCcccceEEEEEEEecC
Confidence 99999999999876554 44332222 24667777653
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-58 Score=471.67 Aligned_cols=360 Identities=26% Similarity=0.301 Sum_probs=295.6
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC--CChHHHHHHHHcCCCCCC
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK--TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~--~~~~a~~ia~~lGl~~~~ 124 (472)
++++|||+++|||+++ .+.++.+|+.+|+++||+|+|+++++||.+++|+..++.. .++++..++..+|++ ..
T Consensus 2 ~~v~IvG~~~tp~~~~----~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~ 76 (389)
T PRK06064 2 RDVAIIGVGQTKFGEL----WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PI 76 (389)
T ss_pred CcEEEEEcccccceec----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CC
Confidence 5799999999999873 4688999999999999999999999999999988765442 356788899999996 68
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
+.++++++|+|++.+|..|+++|++|++|++||+|+|+++..+....... +. . ..+. .+
T Consensus 77 ~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~---~~---~---------~~~~----~~-- 135 (389)
T PRK06064 77 PATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEA---IA---R---------AGDY----EW-- 135 (389)
T ss_pred CeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhh---hh---c---------cccc----cc--
Confidence 99999999999999999999999999999999999999987653211000 00 0 0000 00
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHh
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMA 284 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~ 284 (472)
+.| .++..+..|++++++|+++||+|+|+++++++++|++|.+ ||.++++++ +|.|+|+
T Consensus 136 ~~~--~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~----------np~a~~~~~---------~t~~~~~ 194 (389)
T PRK06064 136 EEF--FGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYNGSK----------NPYAQFQKE---------ITVEQVL 194 (389)
T ss_pred ccc--cCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhh----------CcHhhhCCC---------CCHHHHh
Confidence 011 1222234689999999999999999999999999999987 788876544 4789999
Q ss_pred cCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc-----c-cccccHHHHHHHHHH
Q psy1213 285 KLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK-----D-QLLLGPAYATPQVLE 358 (472)
Q Consensus 285 ~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~-----~-~~~~~~~~a~~~Al~ 358 (472)
+++|++ +|+|++|||+++|||+++||+|++.|++++.+| ++|+|++...+.+. + ....+...++++||+
T Consensus 195 ~s~~i~----~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 269 (389)
T PRK06064 195 NSPPVA----DPLKLLDCSPITDGAAAVILASEEKAKEYTDTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYK 269 (389)
T ss_pred cCCccc----CCCchhhcCCCCCcceEEEEecHHHHHHhcCCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHH
Confidence 999997 689999999999999999999999999998655 69999998765321 1 122345689999999
Q ss_pred HcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcC-------CCccCCCCCCCCcCCCCCCccccCCCCCcHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMG-------RSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRL 431 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g-------~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~ 431 (472)
++||+++|||++|+||+|++++++++|+|| ||++|++ .+.++|++| ||++||++++|||+|+||+++
T Consensus 270 ~aGi~~~did~~e~~d~ft~~~~~~~e~lg---l~~~G~~~~~~~~g~~~~~g~~p---vN~~GG~l~~Ghp~~a~G~~~ 343 (389)
T PRK06064 270 MAGIEPKDIDVAEVHDCFTIAEILAYEDLG---FAKKGEGGKLAREGQTYIGGDIP---VNPSGGLKAKGHPVGATGVSQ 343 (389)
T ss_pred HcCCCHHHCCEEEecCCCcHHHHHHHHHcC---CCCCCchHHHHHCCCccCCCCee---ecCCCCcccCCCCcchhHHHH
Confidence 999999999999999999999999999999 9999884 556788888 999999999999999999999
Q ss_pred HHHHHHHHhhcc--CCcc-------hhhhhccCc---ceeEEEEEeC
Q psy1213 432 TVHAANRLVRED--GQFG-------LIAACAAGG---QGVGMIIERH 466 (472)
Q Consensus 432 v~e~v~qL~~~~--g~~g-------l~~~~~~GG---~~~a~~l~~~ 466 (472)
++|+++||++++ +.+| |++ +.|| .+.++||++.
T Consensus 344 ~~e~~~qL~g~a~~g~rqv~~a~~~l~~--~~g~~~~~~~~~vl~~~ 388 (389)
T PRK06064 344 AVEIVWQLRGEAEKGRQQVIGAGYGLTH--NVGGTGHTAVVHILSRK 388 (389)
T ss_pred HHHHHHHHhCCCCCCCccCCCccEEEEe--cCCCccceEEEEEEEec
Confidence 999999999998 6544 444 3343 2467777764
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-58 Score=472.64 Aligned_cols=360 Identities=23% Similarity=0.316 Sum_probs=283.2
Q ss_pred ccCCceEEEecccccc-ccc-----------CccCCCCCHHHHHHHHHHHHHHHcCCCcCc--cCEEEEEeecCCC--CC
Q psy1213 44 KTGKNIVFVDGVRTPF-LLS-----------GTDYANMMAHELARHSLIGILQKTGISKDL--IDYIVYGTVIQEV--KT 107 (472)
Q Consensus 44 ~~~~~~~Ivg~~~t~~-~~~-----------~~~~~~~~~~~La~~A~~~Al~~agi~~~~--Id~vi~g~~~~~~--~~ 107 (472)
..|+++|||+++|||| ++. .+.+.+.++.+|+.+|+++||+|+|+++++ ||.+++|+..+.. .+
T Consensus 9 ~~~~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~ 88 (438)
T PTZ00455 9 QAAKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQ 88 (438)
T ss_pred hhcCceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccc
Confidence 3456899999999999 872 344568899999999999999999999999 9999999876543 34
Q ss_pred ChHHHHHHHHcCCC------CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhh
Q psy1213 108 SNIGREAALSAGFS------DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRA 181 (472)
Q Consensus 108 ~~~a~~ia~~lGl~------~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~ 181 (472)
+++++.++..+|++ ...|+++|+++|+||+.||.+|++.|++|.+|++||+|+|+||+.|....... +
T Consensus 89 ~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~---~--- 162 (438)
T PTZ00455 89 GHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDY---L--- 162 (438)
T ss_pred cchHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhh---c---
Confidence 67888888776665 47899999999999999999999999999999999999999998775311000 0
Q ss_pred ccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhC-CCHHHHHHHHHHhHHHHHHHHHcCCCCCCc
Q psy1213 182 NKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFK-VSRKEQDEYALRSHTLAQQAQEKGYLTDIL 260 (472)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g-~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~ 260 (472)
......+ . ...+ .++..+..|++. .+||++|| +|||+++.|++++|+++.. |
T Consensus 163 ~~~~~~~--------~-~~~~-------~~~~~~~~~a~~-~~ym~~~ggitrE~la~vAvka~~~a~~----------n 215 (438)
T PTZ00455 163 ARAADYR--------R-QRKL-------DDFTFPCLFAKR-MKYIQEHGHFTMEDTARVAAKAYANGNK----------N 215 (438)
T ss_pred cchhhcc--------c-cccc-------cCcchHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHhc----------C
Confidence 0000000 0 0000 011111224444 39999996 9999999999999998876 7
Q ss_pred cceec-cceeec----cCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCC----cEEE
Q psy1213 261 PIQVG-DKTISK----DNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKP----KAYL 331 (472)
Q Consensus 261 P~a~~-~~~~~~----de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~----~a~I 331 (472)
|+++. +++++. |+.++ + .++++++++. .|++++|||+++|||+|+||+|++.|++++.+| .+||
T Consensus 216 P~A~~~~~~~t~~~~~d~~~~--~-~e~l~s~~i~----~pl~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i 288 (438)
T PTZ00455 216 PLAHMHTRKLSLEFCTGASDK--N-PKFLGNETYK----PFLRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEI 288 (438)
T ss_pred CHhhccCCCCCceeecccccc--c-hhhhcCCccc----CcCchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEE
Confidence 88874 333322 22222 2 2456666664 578999999999999999999999999999877 6999
Q ss_pred EEeEEecc----CCcccc-cccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CC
Q psy1213 332 RDFVYVSQ----DPKDQL-LLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GR 399 (472)
Q Consensus 332 ~g~~~~~~----~p~~~~-~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~ 399 (472)
+|++..++ +|.+.. ......|+++||++||++++|||++|+||||++++++.+|+|| ||++|+ |.
T Consensus 289 ~g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~e~lG---l~~~G~~~~~~~~G~ 365 (438)
T PTZ00455 289 KSLACASGNLYEDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALG---IAEYGHAKDLIRNGA 365 (438)
T ss_pred EEEEEecCCcccCccccccchHHHHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHHHHcC---CCCCCchHHHHhcCC
Confidence 99998765 332211 1223689999999999999999999999999999999999999 999987 57
Q ss_pred CccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchh
Q psy1213 400 SSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449 (472)
Q Consensus 400 ~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~ 449 (472)
+.++|++| ||++||++++|||+||||+++++|+++|||++++++|+.
T Consensus 366 ~~~~G~~p---vN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~ag~~Qv~ 412 (438)
T PTZ00455 366 TALEGRIP---VNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQCGEYQMK 412 (438)
T ss_pred cccCCCce---eeCCCchhhcCCCcchHHHHHHHHHHHHHhhccccCCCC
Confidence 78889988 999999999999999999999999999999988766553
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-58 Score=467.98 Aligned_cols=359 Identities=18% Similarity=0.173 Sum_probs=284.6
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
.+++|||+++|+|+++ ++.++.+|+.+|+++||+|+||+++|||.++.....+ .. ....++..+|++ ..+.
T Consensus 5 ~~vaIvG~g~t~~~~~----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~---~~-~~~~~~~~lGl~-~~~~ 75 (388)
T PRK08142 5 GKAYIVGAYEHPTRKA----PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAP---GL-GPASMVDYLGLK-LRHV 75 (388)
T ss_pred CCEEEEEEeeccceeC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCC---Cc-cHHHHHHhCCCC-Ceee
Confidence 4899999999999984 4688999999999999999999999999976521111 11 123588999995 6788
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCc
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL 206 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (472)
..++.+|+++..++.+|+..|++|.+|+|||+|+|+++........... + ... ..+. .+ +.
T Consensus 76 ~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~--~---~~~--------~~~~---~~---~~ 136 (388)
T PRK08142 76 DSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRN--W---GAD--------APDA---PF---EA 136 (388)
T ss_pred ccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCcccccccc--c---ccc--------cccc---ch---hc
Confidence 8999999999999999999999999999999999997532111000000 0 000 0000 00 01
Q ss_pred ccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcC
Q psy1213 207 PAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKL 286 (472)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~ 286 (472)
| .++..+..|++++++||++||+++|+++++++++|+||.. ||++++++++ |+|+|+++
T Consensus 137 ~--~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~----------NP~A~~r~~~---------t~e~vl~s 195 (388)
T PRK08142 137 P--YGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQH----------NPHAMLRDVV---------TVEDVLNS 195 (388)
T ss_pred c--cccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhcc----------CChhhcCCCC---------CHHHHhcC
Confidence 1 1223345789999999999999999999999999999987 8999977654 79999999
Q ss_pred CCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCC----cccccccHHHHHHHHHHHcCC
Q psy1213 287 KPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDP----KDQLLLGPAYATPQVLERAGL 362 (472)
Q Consensus 287 ~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p----~~~~~~~~~~a~~~Al~~Agl 362 (472)
++|. +|+|++|||+++|||+|+||+|++.|++++. +.+||.|++...+.. .+......+.++++||++||+
T Consensus 196 ~~Ia----~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~-~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi 270 (388)
T PRK08142 196 PMIA----DPLHRLDCCVVTDGGGALVVVRPEIARSLKR-PLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGV 270 (388)
T ss_pred Cccc----CCchhhccCcccCceEEEEEecHHHHhhcCC-CCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCC
Confidence 9996 7999999999999999999999999999974 458999999864311 111233457899999999999
Q ss_pred CcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcC-------CCcc-CCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 363 SLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMG-------RSSK-VGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 363 ~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g-------~~~~-~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
+++|||++|+||||++.+++.+|+|| ||++|+| .+.. +|++| ||++||++++|||+|+||+++++|
T Consensus 271 ~~~did~~elyD~Fs~~~~~~~E~lG---l~~~Ge~~~~v~~g~~~~~~G~lP---vN~sGG~l~~G~p~gatG~~~~~E 344 (388)
T PRK08142 271 TPADIKYASIYDSFTITVLMQLEDLG---FCKKGEGGKFVADGNLISGVGKLP---FNTDGGGLCNNHPANRGGMTKVIE 344 (388)
T ss_pred CHHHCCEEEEeccchHHHHHHHHHcC---CCCCCchHHHHHCCCcccCCCCcc---ccCCChhhcCCCcCcccHHHHHHH
Confidence 99999999999999999999999999 9999985 4445 49999 999999999999999999999999
Q ss_pred HHHHHhhccC--------Ccchhhhhcc-Cc---ceeEEEEEe
Q psy1213 435 AANRLVREDG--------QFGLIAACAA-GG---QGVGMIIER 465 (472)
Q Consensus 435 ~v~qL~~~~g--------~~gl~~~~~~-GG---~~~a~~l~~ 465 (472)
+++|||++++ +++|+++.++ .| ..+++||++
T Consensus 345 ~~~QLrG~ag~~rQV~~a~~gl~~~~Gg~~~~~~~~~~~vl~~ 387 (388)
T PRK08142 345 AVRQLRGEAHPAVQVPNCDLALAHGTGGLLGSRHGSATLILER 387 (388)
T ss_pred HHHHHcCCCCCCCCCCCCcEEEEeCCCCCCcCCCceEEEEEec
Confidence 9999999864 4566664332 11 125677765
|
|
| >KOG1391|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-57 Score=415.58 Aligned_cols=385 Identities=34% Similarity=0.530 Sum_probs=343.1
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCC-CCChHHHHHHHHcCCCCCCc
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEV-KTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~-~~~~~a~~ia~~lGl~~~~~ 125 (472)
+-+|||++-||+|+.+++.+.+.+.+||..-|++.||+.+++.++.+|.||+|++...+ .+.++++++....|+|.+.|
T Consensus 4 kgvfiVaAKRTaFGtfGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~p 83 (396)
T KOG1391|consen 4 KGVFIVAAKRTAFGTFGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETP 83 (396)
T ss_pred ceEEEEEecccccccccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccC
Confidence 46899999999999999889999999999999999999999999999999999977654 35678999999999999999
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++||+-|.||.+++..+++.|.-|+++++|++|+|.||..|+...+ .|.+- ..|.++...|. .|.
T Consensus 84 ALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRn-vRFGT-------~LG~~y~lED~-LW~----- 149 (396)
T KOG1391|consen 84 ALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRN-VRFGT-------KLGSDYKLEDS-LWV----- 149 (396)
T ss_pred ceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeee-eeecc-------ccccccchhhh-Hhh-----
Confidence 99999999999999999999999999999999999999999997642 22211 12222222222 121
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec----cceeeccCCCcc-CC
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG----DKTISKDNGVRV-ST 279 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~----~~~~~~de~~~~-~t 279 (472)
++.+.....+|+++|+++..+|.+|||+.++|+..++++..++++.|+|+ |+.|+... ...|.-||.+|+ +|
T Consensus 150 --sLtD~y~kLpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT 227 (396)
T KOG1391|consen 150 --SLTDQYVKLPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTT 227 (396)
T ss_pred --hccchhhhcchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccch
Confidence 22344445689999999999999999999999999999999999999997 68998772 245677999997 89
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLER 359 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~ 359 (472)
+|+|.+++|+|- .+|.++..+.+.++|||+|+|++++|..++++.+|+++|++|...+++|.. |+.+|..|++.+|+.
T Consensus 228 ~E~L~KLppvFk-KdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~I-MGIGPvPAI~~vLKk 305 (396)
T KOG1391|consen 228 LEQLQKLPPVFK-KDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSI-MGIGPVPAISGVLKK 305 (396)
T ss_pred HHHHhhCCchhc-cCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhh-ccccCcHHHHHHHHH
Confidence 999999999994 579999999999999999999999999999999999999999999999985 899999999999999
Q ss_pred cCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHH
Q psy1213 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 360 Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
+|++..|||++|+++.|+.+.+..-++|+ +|..++|++||.+++|||+|+||.+....+|+.|
T Consensus 306 sGlkl~DiDl~EvNEAFApQ~LAv~r~L~-----------------ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL 368 (396)
T KOG1391|consen 306 SGLKLKDIDLVEVNEAFAPQYLAVERSLD-----------------LDISKLNVNGGAIALGHPLGASGSRITAHLVHEL 368 (396)
T ss_pred cCCcccccceEEechhhchHHHHHHHhhC-----------------CChhhccccCceeeccCccccCcchhhHHHHHHH
Confidence 99999999999999999999999889998 6888999999999999999999999999999999
Q ss_pred hhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 440 VREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 440 ~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++.+.|++-.+|++||+|.+++++..
T Consensus 369 ~Rr~~KYgiGSACIGGGQGIA~l~e~~ 395 (396)
T KOG1391|consen 369 RRRGGKYGIGSACIGGGQGIAVLIEST 395 (396)
T ss_pred HHcCCccccccccccCCceEEEEEEec
Confidence 999999999999999999999999975
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-57 Score=462.14 Aligned_cols=340 Identities=25% Similarity=0.286 Sum_probs=286.9
Q ss_pred EecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecc
Q psy1213 52 VDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM 131 (472)
Q Consensus 52 vg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~ 131 (472)
||++.|||+++ .+.++.+|+.+|+++||+|+|+++++||.+++++..+....++++..++..+|++ ..+.++++.
T Consensus 1 vG~g~t~~~~~----~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~ 75 (375)
T cd00829 1 VGVGMTPFGRR----SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA 75 (375)
T ss_pred CeeeecCcccC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC
Confidence 46779999974 2688999999999999999999999999999998776654567889999999997 789999999
Q ss_pred cCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccc
Q psy1213 132 ACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAE 211 (472)
Q Consensus 132 ~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (472)
+|+|++.+|.+|+++|++|.+|++||+|+|+++..|.... . . ... .+..+..+ .+. ..
T Consensus 76 ~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~--~----~--~~~----------~~~~~~~~---~~~-~~ 133 (375)
T cd00829 76 AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDE--A----G--GRA----------SDLEWEGP---EPP-GG 133 (375)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccch--h----h--ccc----------cchhhhhc---ccc-cC
Confidence 9999999999999999999999999999999987663110 0 0 000 00000000 000 01
Q ss_pred cccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCccc
Q psy1213 212 FSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFV 291 (472)
Q Consensus 212 ~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~ 291 (472)
...+..|++.+++||++||+|+|+++.|++++|++|.+ ||.++++++ +|.|++++++|++
T Consensus 134 ~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~----------np~A~~~~~---------~t~d~~~~~~~i~- 193 (375)
T cd00829 134 LTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAAR----------NPYAQFRKP---------ITVEDVLNSRMIA- 193 (375)
T ss_pred CChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhc----------CChhhcCCC---------CCHHHHhcCCccc-
Confidence 22235699999999999999999999999999999987 788876554 4789999999997
Q ss_pred CCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc------cccccHHHHHHHHHHHcCCCcC
Q psy1213 292 KPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD------QLLLGPAYATPQVLERAGLSLS 365 (472)
Q Consensus 292 ~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~------~~~~~~~~a~~~Al~~Agl~~~ 365 (472)
+|+|++|||+++|||+|+||+|++.|+++ .++.++|+|++...+.+.. ....+++.++++||++||++++
T Consensus 194 ---~pl~~~~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~ 269 (375)
T cd00829 194 ---DPLRLLDCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPD 269 (375)
T ss_pred ---CCCchhhcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHH
Confidence 78999999999999999999999999999 5677999999997664431 1344568899999999999999
Q ss_pred CcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHH
Q psy1213 366 DIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANR 438 (472)
Q Consensus 366 dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~q 438 (472)
|||++|+||||++++++.+|+|| ||++|+ |.+..+|++| ||++||++++|||+|++|+++++|+++|
T Consensus 270 did~~ei~d~F~~~~l~~~e~lG---l~~~g~~~~~~~~g~~~~~G~~p---vN~~GG~la~Ghp~gatG~~~~~e~~~q 343 (375)
T cd00829 270 DIDVAELYDCFTIAELLALEDLG---FCEKGEGGKLVREGDTAIGGDLP---VNTSGGLLSKGHPLGATGLAQAVEAVRQ 343 (375)
T ss_pred HCCEEEecCcChHHHHHHHHHcC---CCCCCchHHHHHCCCccCCCCcc---ccCCCchhcCCCCccHHHHHHHHHHHHH
Confidence 99999999999999999999999 999887 6788999999 9999999999999999999999999999
Q ss_pred HhhccCCcch
Q psy1213 439 LVREDGQFGL 448 (472)
Q Consensus 439 L~~~~g~~gl 448 (472)
||++++.+|+
T Consensus 344 lrg~ag~~qv 353 (375)
T cd00829 344 LRGEAGARQV 353 (375)
T ss_pred hcCCcccccC
Confidence 9998765444
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-58 Score=468.05 Aligned_cols=363 Identities=26% Similarity=0.367 Sum_probs=291.5
Q ss_pred EecccccccccC---ccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHH-HHHHcCCCCCCcee
Q psy1213 52 VDGVRTPFLLSG---TDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGRE-AALSAGFSDKTPAH 127 (472)
Q Consensus 52 vg~~~t~~~~~~---~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~-ia~~lGl~~~~~~~ 127 (472)
+|++||||+++. +.+....+.+|+.+|+++||++++++|++||.+++|+..+++.++.+++. +...+|+. +.|++
T Consensus 1 ~g~~~Tpfg~~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~ 79 (393)
T cd00826 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAI 79 (393)
T ss_pred CccccCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEE
Confidence 467899999865 44566788999999999999999999999999999998887655667764 56677875 78999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+|+++|+|++.++..|.++|++|.+|++||+|+|+||..+....... .++.+.. .+. ..
T Consensus 80 ~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~------------------~~~~~~~-~~~-~r- 138 (393)
T cd00826 80 GMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEK------------------HIDVLIN-KYG-MR- 138 (393)
T ss_pred EecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccc------------------hhHHHHH-HhC-Ch-
Confidence 99999999999999999999999999999999999987652110000 0000000 000 00
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHh---HHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHh
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRS---HTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMA 284 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~---~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~ 284 (472)
........+++.+++||++||+++|+++.+++++ |.++.+ ||.++.+++ +|+|+++
T Consensus 139 --~~~~~~a~~s~~~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~----------np~a~~~~~---------~t~e~~~ 197 (393)
T cd00826 139 --ACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDA----------DEYIQFGDE---------ASLDEIA 197 (393)
T ss_pred --hhccHHHHHHHHHHHHHHHcCCCHHHEEEEEEecCCCCEEEec----------CCCCCCCCC---------CCHHHHh
Confidence 0001124578889999999999999999999887 454443 787765433 4899999
Q ss_pred cCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCC-CCcEEEEEeEEec------cCCcc---cccccHHHHHH
Q psy1213 285 KLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGL-KPKAYLRDFVYVS------QDPKD---QLLLGPAYATP 354 (472)
Q Consensus 285 ~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~-~~~a~I~g~~~~~------~~p~~---~~~~~~~~a~~ 354 (472)
+++|++. +++|+|++|||+++|||+|+||+|++.|+++++ +..++|.+.+... .+|.. .+..+++.|++
T Consensus 198 ~~~~i~~-~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 276 (393)
T cd00826 198 KLRPAFD-KEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAAR 276 (393)
T ss_pred cCCCccC-CCCCEechhcCCcCCCeEEEEEecHHHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHH
Confidence 9999974 458999999999999999999999999999985 2336777665532 23321 24556789999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCCCc
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFAAT 427 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~gas 427 (472)
+||++|||+++|||++|+||||++++++.+|+|| ||++|+ |.+.++|++| ||++||++++|||+|||
T Consensus 277 ~al~~Agi~~~DID~~Ei~d~Fa~~~l~~~e~lg---l~~~g~~~~~~~~g~~~~~G~~p---vN~~GG~la~GhP~gAt 350 (393)
T cd00826 277 KALEKAGLGIGDLDLIEAHDAFAANACATNEALG---LCPEGQGGALVDRGDNTYGGKSI---INPNGGAIAIGHPIGAS 350 (393)
T ss_pred HHHHHcCCCHHHcCeeehhhhhHHHHHHHHHHhC---CCcccchhhhhhcCccccCCcce---ECCCCchhhcCCCcccc
Confidence 9999999999999999999999999999999999 999987 5667889988 99999999999999999
Q ss_pred HHHHHHHHHHHHhhccCC-----cchhhhhccCcceeEEEEE
Q psy1213 428 GVRLTVHAANRLVREDGQ-----FGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 428 G~~~v~e~v~qL~~~~g~-----~gl~~~~~~GG~~~a~~l~ 464 (472)
|+++++|+++||+++++. .++...|+.||.++++|||
T Consensus 351 G~~~~~e~~~qL~g~ag~~q~~~~~~~~~~~~Gg~g~a~~~~ 392 (393)
T cd00826 351 GAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGAAMCIE 392 (393)
T ss_pred HHHHHHHHHHHHhhhhccccCCCcCEEEEEcCCCceeEEEEe
Confidence 999999999999998654 4455677888999999987
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >KOG1389|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-56 Score=416.98 Aligned_cols=383 Identities=36% Similarity=0.535 Sum_probs=331.5
Q ss_pred ccccccCCceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHc
Q psy1213 40 SVKDKTGKNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSA 118 (472)
Q Consensus 40 ~~~~~~~~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~l 118 (472)
......-+|++||++.||++++- ++.+.+..+.+|...+.+..+++.+++|.+|.-|++|+++....+..-.+..+.+.
T Consensus 29 ~~~~~~~~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~a 108 (435)
T KOG1389|consen 29 GDSAASAEDVVIVAALRTAICKAKRGGFKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYA 108 (435)
T ss_pred cCccccccCEEEEeeccchhhhcccCCcccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHc
Confidence 33444557999999999999983 56788999999999999999999999999999999999998776655566777899
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCC-cccchhhhHHHHHhhccCCCchhhhhhhhcc
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI-PIRHSRKMRSLLLRANKAKTPADRLKLLATI 197 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (472)
|+|..+|..+||+.|+||++++..-+..|++|.+|+.|..|+|+|+.. |....... .+. .. .
T Consensus 109 g~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~-----------~~~--~~---~- 171 (435)
T KOG1389|consen 109 GFPETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSI-----------NPR--LQ---K- 171 (435)
T ss_pred CCCcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCcccc-----------Chh--hh---h-
Confidence 999999999999999999999999999999999999999999999865 22111000 000 00 0
Q ss_pred CCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCcccee---cc----c--
Q psy1213 198 RPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQV---GD----K-- 267 (472)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~---~~----~-- 267 (472)
.+. .--.-.+||++.+...++||+||++++++++.+|++|.+|.+.|.|. ||.|.+. .. +
T Consensus 172 --------~~~--A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i 241 (435)
T KOG1389|consen 172 --------FEK--ARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPI 241 (435)
T ss_pred --------hhH--HhhcccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccce
Confidence 000 00112579999999999999999999999999999999999999886 6999843 11 2
Q ss_pred eeeccCCCcc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccccc
Q psy1213 268 TISKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLL 346 (472)
Q Consensus 268 ~~~~de~~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~ 346 (472)
.++.||++|+ +|.+.+.+++|+|.+ +|..|..|.++++|||+|++|+....|.++|++.+++.+.|...+.+|.. |+
T Consensus 242 ~v~~DeGiRp~ttl~~l~klkpvFkk-dGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P~i-MG 319 (435)
T KOG1389|consen 242 TVSVDEGIRPNTTLESLAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPPAI-MG 319 (435)
T ss_pred eEecCCCCCCCcchhHHhhcchhhhc-CCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCHHH-cC
Confidence 3456999997 889999999999965 59999999999999999999999999999999999999999998888875 89
Q ss_pred ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCC
Q psy1213 347 LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAA 426 (472)
Q Consensus 347 ~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~ga 426 (472)
.+|..|+..+++.+|+..+|||+||+++.|+.|.+-.++.|+ +|+++||+.||.+++|||+||
T Consensus 320 iGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~~KL~-----------------ld~ekVN~~GGaiAlGHPlGa 382 (435)
T KOG1389|consen 320 IGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCRNKLG-----------------LDPEKVNVNGGAIALGHPLGA 382 (435)
T ss_pred CCchhhhHHHHHHcCCcccccceeehhHHHHHHHHHHHHHhC-----------------CCHHHcCCCCceeeccCCcCC
Confidence 999999999999999999999999999999999998889998 688999999999999999999
Q ss_pred cHHHHHHHHHHHHhhccC--CcchhhhhccCcceeEEEEEeCCC
Q psy1213 427 TGVRLTVHAANRLVREDG--QFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 427 sG~~~v~e~v~qL~~~~g--~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
||+++++.+++.|++++. ++|++.+|++-|+|++.|++|.+.
T Consensus 383 tGAR~VaTlL~emKrrgkd~~~GVvSmCIGtGmGaAAvFer~~~ 426 (435)
T KOG1389|consen 383 TGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGGG 426 (435)
T ss_pred ccHhHHHHHHHHHHhhccccccceEEEeecCCcchheeeecCCC
Confidence 999999999999987754 589999999999999999999754
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-55 Score=445.06 Aligned_cols=354 Identities=18% Similarity=0.177 Sum_probs=275.5
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~ 126 (472)
.+++|||+++|+|+++ .+.++.+|+.+|+++||+|+|++++|||.+++.+. . . .. ...++..+|++...+.
T Consensus 4 ~~v~IvG~g~t~~~r~----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~-~~--~~~l~~~lGl~~~~~~ 74 (386)
T PRK07855 4 GKAAIVGIGATEFSKN----SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-T-NP--EIAVARALGIGELKFF 74 (386)
T ss_pred CCEEEEEeeecccccC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-c-cc--HHHHHHHCCCCCCcce
Confidence 4799999999999874 46789999999999999999999999999987432 1 1 11 2468899999522456
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeec--ccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE--FMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
.+|+.+|+++..+|..|+..|++|.+|+|||+|+. +............ ...... ...+. .+
T Consensus 75 ~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~---------~~~~~~--~~~~~---~~--- 137 (386)
T PRK07855 75 SRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGL---------AENPTS--TGVDY---GW--- 137 (386)
T ss_pred eeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccc---------cccccc--cccch---hh---
Confidence 78999999999999999999999999999999982 2210000000000 000000 00000 00
Q ss_pred Cccccccc-ccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceec-cceeeccCCCccCCHHH
Q psy1213 205 ELPAVAEF-SSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVG-DKTISKDNGVRVSTPEQ 282 (472)
Q Consensus 205 ~~~~~~~~-~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~-~~~~~~de~~~~~t~~~ 282 (472)
+.| .++ .++..|++.+++||++||+|+|+++++++++|+||.+ ||++++ ++++ |.|+
T Consensus 138 ~~~--~g~~~~~~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~----------NP~A~~~~~~~---------t~e~ 196 (386)
T PRK07855 138 SYP--HGLLTPAAWVAMLARRYMHEYGATSEDFGRVAVADRKHAAT----------NPKAWFYGRPI---------TLED 196 (386)
T ss_pred hhh--cCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhc----------ChHhhhcCCCC---------CHHH
Confidence 011 122 2234689999999999999999999999999999987 899986 3444 8999
Q ss_pred HhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc---------ccc-cccHHHH
Q psy1213 283 MAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK---------DQL-LLGPAYA 352 (472)
Q Consensus 283 ~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~---------~~~-~~~~~~a 352 (472)
++++++|. +|+|++|||+++|||+|+||+|++.|++++.+| +||.|++....... +.. ..+.+.|
T Consensus 197 vl~s~~Ia----~Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~a 271 (386)
T PRK07855 197 HQNSRWIA----EPLRLLDCCQESDGAVALVVTSAERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLV 271 (386)
T ss_pred HhcCCccc----CCchhhhcCCcCCceEEEEEecHHHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHH
Confidence 99999996 799999999999999999999999999998776 79999988542110 101 1223579
Q ss_pred HHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhc-------CCCccCCCCCCCCcCCCCCCccccCCCC
Q psy1213 353 TPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM-------GRSSKVGVPDLNKFNNWGGSLSIGHPFA 425 (472)
Q Consensus 353 ~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~-------g~~~~~G~~p~~~vN~~GG~~a~Ghp~g 425 (472)
+++||++||++++|||++|+||||++++++.+|+|| ||++|+ |.+.++|++| ||++||+++.|||.
T Consensus 272 a~~a~~~AGi~~~DiDv~El~D~Ft~~~l~~~E~lG---~~~~Ge~~~~v~~G~~~~~G~lP---vN~sGGll~~gh~~- 344 (386)
T PRK07855 272 ARQLWAQSGLGPADIDTAILYDHFTPFVLMQLEELG---FCGRGEAKDFIADGALELGGRLP---INTHGGQLGEAYIH- 344 (386)
T ss_pred HHHHHHHcCCCHHHCcEEEeccCCcHHHHHHHHHcC---CCCCCcHHHHHHCCCcccCCccc---ccCCCcccccCchh-
Confidence 999999999999999999999999999999999999 999998 4668899999 99999999999988
Q ss_pred CcHHHHHHHHHHHHhhccC------CcchhhhhccCcc-eeEEEE
Q psy1213 426 ATGVRLTVHAANRLVREDG------QFGLIAACAAGGQ-GVGMII 463 (472)
Q Consensus 426 asG~~~v~e~v~qL~~~~g------~~gl~~~~~~GG~-~~a~~l 463 (472)
|+++++|+++|||++++ +++|++ +.||. .+++||
T Consensus 345 --G~~~i~E~~~QLrG~a~~QV~~a~~gl~~--~~Gg~~~~~~~~ 385 (386)
T PRK07855 345 --GMNGIAEAVRQLRGTSVNQVPGVENVLVT--AGTGVPTSGLIL 385 (386)
T ss_pred --hHHHHHHHHHHHhCCCcccCCCCcEEEEE--CCCCccceeEEe
Confidence 89999999999998754 356665 44554 455665
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-53 Score=426.18 Aligned_cols=344 Identities=19% Similarity=0.177 Sum_probs=264.7
Q ss_pred CCceEEEecccccccccCccCCCCCH-HHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCC-hHHHHHHHHcCCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMA-HELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTS-NIGREAALSAGFSDK 123 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~-~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~-~~a~~ia~~lGl~~~ 123 (472)
|++++|+|+++|||+++. .+.+. .+|+.+|+++||+|+|++++|||.++.+.. ...... .....+...+|+...
T Consensus 1 M~~vaIvG~g~t~~~~~~---~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~ 76 (352)
T PRK07937 1 MRDVAVVGFAQAPHVRRT---DGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPP 76 (352)
T ss_pred CCcEEEEEeeccccccCC---CCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCC
Confidence 368999999999999842 13555 899999999999999999999998865432 111111 112234566777323
Q ss_pred CceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCC
Q psy1213 124 TPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFI 203 (472)
Q Consensus 124 ~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (472)
.+...++ ++|..+|..|+..|++|.+|+|||+|+|+++..... .. +. ...+. ++
T Consensus 77 ~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~---~~---~~------------~~~~~----~~- 130 (352)
T PRK07937 77 INESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLR---RV---LA------------LQLDP----YT- 130 (352)
T ss_pred CceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchh---hh---hh------------ccCCc----ce-
Confidence 4566665 468889999999999999999999999987531100 00 00 00011 11
Q ss_pred CCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHH
Q psy1213 204 PELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQM 283 (472)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~ 283 (472)
+.|. ++..+..|++.+++||++||.|+|+++++++++|+||.. ||+++++ +|.|++
T Consensus 131 -~~p~--G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~----------NP~A~~r-----------it~edv 186 (352)
T PRK07937 131 -VAPL--WPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARR----------NPSAEPS-----------ISVDEL 186 (352)
T ss_pred -eccC--CCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhh----------Cchhhcc-----------CCHHHH
Confidence 0111 222345689999999999999999999999999999987 8999863 489999
Q ss_pred hcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccc-ccccHHHHHHHHHHHc-C
Q psy1213 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ-LLLGPAYATPQVLERA-G 361 (472)
Q Consensus 284 ~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~-~~~~~~~a~~~Al~~A-g 361 (472)
+++++|. +|+|++|||+++|||+|+||+|+++|++++.+| ++|.|++...+.+... ....+..+++++++++ |
T Consensus 187 l~s~~ia----~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~~~~~~d~~~~~~~~~a~~~aAg 261 (352)
T PRK07937 187 LARPYFA----DPLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESPSLGARDLTRSPSTALAAEAATG 261 (352)
T ss_pred hcCCccc----CCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCccccccccccHHHHHHHHHHhcC
Confidence 9999996 799999999999999999999999999999877 9999999865422110 0123345566677775 9
Q ss_pred CCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhh
Q psy1213 362 LSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVR 441 (472)
Q Consensus 362 l~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~ 441 (472)
++++|||++|+||||++++++.+|+|| || |++| ||++||+++ |||.|+||+.+++|+++||++
T Consensus 262 i~~~diD~~Ei~D~F~~~~l~~~e~lG---l~----------g~~p---vN~~GG~l~-ghp~gatG~~~~~e~~~QL~g 324 (352)
T PRK07937 262 GDAGGVDVAELHAPFTHQELILREALG---LG----------DKTK---VNPSGGALA-ANPMFAAGLERIGEAARHIWD 324 (352)
T ss_pred CCHHHCCEEEEeCCChHHHHHHHHHcC---CC----------CCCC---cCCCccchh-cCchhHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999 54 4578 999999999 999999999999999999999
Q ss_pred ccCCcchhhhhccC-c-ceeEEEEEe
Q psy1213 442 EDGQFGLIAACAAG-G-QGVGMIIER 465 (472)
Q Consensus 442 ~~g~~gl~~~~~~G-G-~~~a~~l~~ 465 (472)
++.+++|++..++. + .+.++|||+
T Consensus 325 ~~a~~~l~~~~Gg~~~~~~~v~v~~~ 350 (352)
T PRK07937 325 GSARRALAHATSGPALQQNLVAVLEG 350 (352)
T ss_pred cCCCEEEEecccccccceEEEEEEec
Confidence 99999999854431 2 345677775
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-51 Score=433.05 Aligned_cols=373 Identities=17% Similarity=0.120 Sum_probs=279.5
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCC--cCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGIS--KDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~--~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~ 124 (472)
+.++|||+++|+|+++... ...++.+|+.+|+++||+|+|++ +++||.+++++.... ...+++..++..+|+. ..
T Consensus 4 ~~~~IVGvG~t~~~~~~~~-~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~~~~~~~~la~~lGl~-p~ 80 (498)
T PRK08257 4 RTPVIVGVGQVTERPDDPA-YGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-RYRDPPGLLAERLGAD-PA 80 (498)
T ss_pred CcEEEEEeeecccccCCcc-cCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-cccCHHHHHHHHcCCC-Cc
Confidence 4789999999999874211 11488999999999999999999 999999998865432 2345678899999995 45
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCC--CchhhhhhhhccCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAK--TPADRLKLLATIRPDFF 202 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 202 (472)
+......+|+++..+|.+|+..|++|++|+|||+|+|+++..+..........+....... ..+... ...... +
T Consensus 81 ~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~ 156 (498)
T PRK08257 81 RTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDP---RPMASP-A 156 (498)
T ss_pred ceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhcccccccccccccccccccccccc---ccccch-h
Confidence 6666777888999999999999999999999999999987543211000000000000000 000000 000000 0
Q ss_pred CCCccccccccc-CCchhHHHHHHHHHhCCCHHH-HHHHHH---HhHHHHHHHHHcCCCCCCccceeccceeeccCCCcc
Q psy1213 203 IPELPAVAEFSS-GETMGHSADRLAAAFKVSRKE-QDEYAL---RSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRV 277 (472)
Q Consensus 203 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~g~t~e~-~~~~a~---~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~ 277 (472)
+.+ .++.. ...|++++++||++||+|+|+ +++++. ++|++|.+ ||++|+++++
T Consensus 157 --e~~--~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~----------NP~A~~r~~~-------- 214 (498)
T PRK08257 157 --ELR--HGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAK----------NPHAWIPRER-------- 214 (498)
T ss_pred --hhh--cCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhh----------CHHHhhCCCC--------
Confidence 011 12222 346899999999999999997 444544 78888876 8999976654
Q ss_pred CCHHHHh----cCCCcccCCCCceeccCCCC-cCcceeeeeecCHHHHHHcCC--CCcEEEEEeEEeccCCc----cccc
Q psy1213 278 STPEQMA----KLKPAFVKPHGSVTAANSSF-LTDGASACVIMTEAKAKQLGL--KPKAYLRDFVYVSQDPK----DQLL 346 (472)
Q Consensus 278 ~t~~~~~----~~~p~~~~~~g~l~~~~~~~-~~DGAAAvvL~s~e~A~~~g~--~~~a~I~g~~~~~~~p~----~~~~ 346 (472)
|.|+++ ++|+|. .|+++++||+ .+|||+|+||+|++.|++++. +..++|.|++...+... ....
T Consensus 215 -t~eevl~~~~~~rmIa----~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~ 289 (498)
T PRK08257 215 -SAEEIVTPTPDNRMIA----WPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLH 289 (498)
T ss_pred -CHHHHhcccCCCCeee----CCccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccc
Confidence 788888 677775 7899999996 899999999999999999984 23489999988754211 0112
Q ss_pred ccH--HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCC
Q psy1213 347 LGP--AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPF 424 (472)
Q Consensus 347 ~~~--~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~ 424 (472)
..+ +.++++||++||++++|||++|+||||++.+++.+|+|| ||++| ++| +|++||++++|||+
T Consensus 290 ~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~E~LG---l~~~g--------~~p---vN~sGGl~s~G~P~ 355 (498)
T PRK08257 290 RSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAARELG---LDLDD--------PRP---LTVTGGLPFFGGPG 355 (498)
T ss_pred cChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHHHHcC---cCCCC--------CCC---cCCCcChhhcCCch
Confidence 222 569999999999999999999999999999999999999 99874 367 99999999999999
Q ss_pred CCcHHHHHHHHHHHHhhccCCcchhhhhccCcc-eeEEEEEeCC
Q psy1213 425 AATGVRLTVHAANRLVREDGQFGLIAACAAGGQ-GVGMIIERHP 467 (472)
Q Consensus 425 gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~-~~a~~l~~~~ 467 (472)
+++|+++++|+++|||++++++||+++.++-+. .+++||++.|
T Consensus 356 ~a~g~~~i~E~v~QLRg~~~~~gLv~~~GG~~~~~~~~vl~~~p 399 (498)
T PRK08257 356 NNYVTHAIAEMVERLRANPGRRGLVTANGGYLTKHSVGVYSTEP 399 (498)
T ss_pred hhHHHHHHHHHHHHHhhcCCCEEEEECCCChhhceEEEEEeCCC
Confidence 999999999999999999999999985432222 4677888876
|
|
| >KOG1406|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-53 Score=387.37 Aligned_cols=376 Identities=20% Similarity=0.268 Sum_probs=300.7
Q ss_pred ccCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCC
Q psy1213 44 KTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDK 123 (472)
Q Consensus 44 ~~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~ 123 (472)
+...+|||||+++|.|.+.+. .++...-||+.+|+..||+|+++.-.+|+..++|.+.++. .+..+.-..+|+. .
T Consensus 3 ~t~~rvyvvgvgmtkf~kpg~-~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-g 77 (408)
T KOG1406|consen 3 KTKPRVYVVGVGMTKFEKPGR-VADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-G 77 (408)
T ss_pred CCCceEEEEecceeeecCCCc-ccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-C
Confidence 334489999999999998764 4577888999999999999999999999999999887765 3455666789995 8
Q ss_pred CceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCC
Q psy1213 124 TPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFI 203 (472)
Q Consensus 124 ~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (472)
.|.+.||+.|++|..+|.+|.+.|++|..|+||+.|+|+|++....... ..++.+..--...+.+.+ .+.
T Consensus 78 ipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~--------~dra~p~dkhi~~m~e~y--gl~ 147 (408)
T KOG1406|consen 78 IPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKA--------ADRALPVDKHISVMSETY--GLE 147 (408)
T ss_pred cceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhh--------hhccCcchhhHHHHHhhc--cCC
Confidence 9999999999999999999999999999999999999999876543210 111111111011111111 010
Q ss_pred CCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHH
Q psy1213 204 PELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQM 283 (472)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~ 283 (472)
..+..++.||...+.+|++||..+|++++++.++|..... ||+.++++.+ +++++
T Consensus 148 ------a~pmaaqmfgnagkehmekygtk~ehfakiawknhkhsvn----------npysqf~dey---------sldqv 202 (408)
T KOG1406|consen 148 ------AAPMAAQMFGNAGKEHMEKYGTKPEHFAKIAWKNHKHSVN----------NPYSQFRDEY---------SLDQV 202 (408)
T ss_pred ------CCcchHHHhhhhHHHHHHHhCCCHHHHhHhhhhccccccC----------ChhHhhhhhc---------cHHHH
Confidence 0123345688899999999999999999999999987543 8988765443 78999
Q ss_pred hcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCc-EEEEEeEEeccCCccccc---------ccHHHHH
Q psy1213 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPK-AYLRDFVYVSQDPKDQLL---------LGPAYAT 353 (472)
Q Consensus 284 ~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~-a~I~g~~~~~~~p~~~~~---------~~~~~a~ 353 (472)
.+++-++ +.++++.|||.+|||+|.||+|+.+.+++++... ++|+|.-..++.|..... .-.+.++
T Consensus 203 m~s~~v~----dflt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa 278 (408)
T KOG1406|consen 203 MKSPQVV----DFLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAA 278 (408)
T ss_pred hcchHHH----HHHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHH
Confidence 9999887 6899999999999999999999999999987533 468887777665543111 1247899
Q ss_pred HHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcC-------CCccCCCCCCCCcCCCCCCccccCCCCC
Q psy1213 354 PQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMG-------RSSKVGVPDLNKFNNWGGSLSIGHPFAA 426 (472)
Q Consensus 354 ~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g-------~~~~~G~~p~~~vN~~GG~~a~Ghp~ga 426 (472)
+++|+.+|++|.||+++|+||||+..+++.+|+|| ||+.|+| .+..+|+.- ||++||+++.|||+||
T Consensus 279 ~~l~aksgltpndvqvielhdcfs~nelityealg---lcpegqg~~~vdrgdntyggkwv---inpsggliskghplga 352 (408)
T KOG1406|consen 279 KRLFAKSGLTPNDVQVIELHDCFSANELITYEALG---LCPEGQGGEFVDRGDNTYGGKWV---INPSGGLISKGHPLGA 352 (408)
T ss_pred HHHHHHcCCCcccceEEEeecccchhhhhhHHHhc---CCCCCCCceeeecCCCccCceEE---ECCCCccccCCCcCcc
Confidence 99999999999999999999999999999999999 9999985 446788888 9999999999999999
Q ss_pred cHHHHHHHHHHHHhhccCCcch-------hhhhccCcceeEEEEE-eCCCC
Q psy1213 427 TGVRLTVHAANRLVREDGQFGL-------IAACAAGGQGVGMIIE-RHPDA 469 (472)
Q Consensus 427 sG~~~v~e~v~qL~~~~g~~gl-------~~~~~~GG~~~a~~l~-~~~~~ 469 (472)
||+.|.+|+.+|||+.++.+++ -++.+.||.+++.|.+ .+|.+
T Consensus 353 tglaqcaelcwqlrg~agkrqvpnakvalqhnlgiggavvv~lyrlgfp~a 403 (408)
T KOG1406|consen 353 TGLAQCAELCWQLRGLAGKRQVPNAKVALQHNLGIGGAVVVALYRLGFPGA 403 (408)
T ss_pred chHHHHHHHHHHHhhhhccccCCCchhhhhhccCcCceeEEEEeecCCcch
Confidence 9999999999999999987655 4566777777777766 35544
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-51 Score=419.61 Aligned_cols=378 Identities=36% Similarity=0.528 Sum_probs=268.1
Q ss_pred CCceEEEecccccccccC-ccCCCCCHHHHHHHHHHHHHHHc--CCCcCccCEEEEEeecCCC-CCChHHHHHHHHcCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSG-TDYANMMAHELARHSLIGILQKT--GISKDLIDYIVYGTVIQEV-KTSNIGREAALSAGFS 121 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~-~~~~~~~~~~La~~A~~~Al~~a--gi~~~~Id~vi~g~~~~~~-~~~~~a~~ia~~lGl~ 121 (472)
+++++|++++||||++++ +.+.+..+.++.....+..+++. ++++.+||.+++|++.+.+ .++++++.++..+|++
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 468999999999999985 55666677777666666665433 5777788899999887775 4678999999999998
Q ss_pred CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCccc-chhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 122 DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIR-HSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 122 ~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
.+.|.++|+.+|+||+.|+..|++.|++|.+|++|++|+|+||+.|+. ..... .. ...|.+..+
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~-------------~~--~~~d~~~~~ 145 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRV-------------LD--SAVDPMFED 145 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhh-------------hh--hhhhhcccc
Confidence 569999999999999999999999999999999999999999999863 11000 00 011221111
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCcc---
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRV--- 277 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~--- 277 (472)
.+ .+......|+++|++||++||+|||+|++|+++||+||.+|+++|+|++++|..+...++..|+.+|.
T Consensus 146 ~~-------~~~~~~~~~g~~A~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~~eI~~~~v~~~~~~~dp~~r~d~~ 218 (392)
T COG0183 146 PL-------GDATPGYLMGLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFFDEITPEDVLNSPVVADPLRRLDCS 218 (392)
T ss_pred cc-------ccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCCCceeeEEecCCceecCCcccCCCC
Confidence 11 12233467999999999999999999999999999999999999999888888775445555555542
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVL 357 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al 357 (472)
++.|.+..+.|.+.+..+.++..+.+.+.||++++++++.+.+++++..+.++++++..++.+|.. + ..+..++..+|
T Consensus 219 ~~~dg~a~l~~a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~-~-~~~v~av~~~~ 296 (392)
T COG0183 219 PTSDGAAALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSI-M-DGPVAAVHDAL 296 (392)
T ss_pred CChhhhcCceeccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCccc-c-cCCHHHHHHHH
Confidence 444555555555422113455555555555555555555555555554444444444444443332 2 33344444444
Q ss_pred HHcCCC-cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 358 ERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 358 ~~Agl~-~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
+.+++. .+|||++|.++.|..+.+...+.+ |+.| ||++||++++|||+||||++++++++
T Consensus 297 ~~~~l~~~edlgl~e~nEafa~~~~~~~~~~----------------G~~~---VN~~GGaiA~GHPiGAtG~~~~~~l~ 357 (392)
T COG0183 297 TIAGLLALEDLGLAEKGEAFAAVALGVTKIL----------------GDLP---VNPSGGAIALGHPIGATGARILVELA 357 (392)
T ss_pred HHcCCchhhhcCceecChHHHHHHHhhHHhc----------------CCce---eCCCcchhhcCCCccchHHHHHHHHH
Confidence 444444 444444444444444444444444 4456 99999999999999999999999999
Q ss_pred HHHhhccC----CcchhhhhccCc-ceeEEEEEeC
Q psy1213 437 NRLVREDG----QFGLIAACAAGG-QGVGMIIERH 466 (472)
Q Consensus 437 ~qL~~~~g----~~gl~~~~~~GG-~~~a~~l~~~ 466 (472)
+||+++.. ++++++.|.+|| ++++++|++.
T Consensus 358 ~ql~~~~~~~~~~~g~~t~~~Ggg~~g~a~vl~~~ 392 (392)
T COG0183 358 RQLRGRGQVVAKRRGLATLCIGGGGQGVAAVLERV 392 (392)
T ss_pred HHHhhccccccccceeeEEEecCcceeEEEEEecC
Confidence 99999666 799999999999 9999999874
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=330.06 Aligned_cols=257 Identities=42% Similarity=0.618 Sum_probs=202.2
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
|+++|||++.||||+++.+.+.+.++.+|+.++++++|+++++++++||.+++|++.+...++++++.++..+|++..+|
T Consensus 1 M~~v~Iv~a~RTPfg~~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp 80 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGKFGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP 80 (264)
T ss_dssp -TTEEEEEEEEE--ECTTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE
T ss_pred CCCEEEEEeeeCccccCCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc
Confidence 67999999999999998888999999999999999999999999999999999999987778899999999999987889
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++|+++|+||+.||.+|+..|++|.+|++|++|+|+||+.|+..... +. ....+. ....+...
T Consensus 81 ~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~-~~-------~~~~g~-~~~~d~~~------- 144 (264)
T PF00108_consen 81 ATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSR-RW-------GAPLGD-AKLEDSLL------- 144 (264)
T ss_dssp EEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCT-TS-------TSSSSG-EEEEEHHH-------
T ss_pred eeeehhhhhHHHHHHHHhhhhhcCCCccEEEEeccccccccccccccc-cc-------ccccCc-cccccccc-------
Confidence 999999999999999999999999999999999999999999875210 00 000110 00001000
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec---c--ceeeccCCCcc-C
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG---D--KTISKDNGVRV-S 278 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~---~--~~~~~de~~~~-~ 278 (472)
.+.+.++.....|++++++++++||+|||++++|+++||++|.+|+++|+|+ |+.|+... + ..++.||.+|+ +
T Consensus 145 ~~~~~~~~~~~~Mg~tAE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~g~~~~~~~De~~r~~~ 224 (264)
T PF00108_consen 145 RDGLYDPYAGQPMGITAENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKKGEEVTVDRDEGIRPDT 224 (264)
T ss_dssp HHTTCCTTTTSHHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETTSEEEEE-S-STCGTT-
T ss_pred cccccccccccccccccccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccccceeeeeccchhhcch
Confidence 1223345556789999999999999999999999999999999999999995 68998762 2 35889999999 9
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEA 318 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e 318 (472)
++|.|.+++|+|.+++|.+|..|+|+++|||+++||+|+|
T Consensus 225 ~~e~l~~L~p~f~~~~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 225 TLEKLAKLKPAFRKDGGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp -HHHHHTS-BSSSTTTSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred hHHHHhcccccccccccccccccCCCccchhheEEEeecC
Confidence 9999999999996545999999999999999999999986
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=263.22 Aligned_cols=277 Identities=22% Similarity=0.269 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCcc-C----EEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 71 AHELARHSLIGILQKTGISKDLI-D----YIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~I-d----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
...|++.++++||+|+|++++++ + ++++|+..+.. .....+.+++..+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 45688999999999999988776 3 57777653321 00124567899999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. +... .+|.
T Consensus 162 l--~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~~~-----~~f~-------------------- 213 (424)
T PRK06333 162 F--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAID-RVSL-----AGFA-------------------- 213 (424)
T ss_pred C--CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHH-----HHHH--------------------
Confidence 9 6999999999999999999999999999999999999998532 1100 0000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t 279 (472)
..+.+..+|+.+++ . ..+||+.
T Consensus 214 ---------------------~~~~l~~~~~~~p~----------------------------~-~~~Pfd~-------- 235 (424)
T PRK06333 214 ---------------------AARALSTRFNDAPE----------------------------Q-ASRPFDR-------- 235 (424)
T ss_pred ---------------------HcccccccCCCCCC----------------------------c-CCCCCCC--------
Confidence 00000001111110 0 0122221
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATPQ 355 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~ 355 (472)
.++|.+ ++|||+++||++++.|+++|.+++++|+|++...+.... ....+..+++++
T Consensus 236 ------------~~~G~~-------~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~ 296 (424)
T PRK06333 236 ------------DRDGFV-------MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLI 296 (424)
T ss_pred ------------CCCCeE-------EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHH
Confidence 134555 899999999999999999999999999999987652111 123345789999
Q ss_pred HHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 356 VLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 356 Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
||++||++|+|||++|+|++++.. +..+++++... |. +..+ +++++++..+||+.||+|+.+++.
T Consensus 297 Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~-fg----------~~~~---~~v~s~K~~~GH~~gAaG~~~~~~ 362 (424)
T PRK06333 297 ALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKV-FG----------HVSG---LAVSSTKSATGHLLGAAGGVEAIF 362 (424)
T ss_pred HHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHH-hC----------CCCC---ceeECcccchhhhHHHHHHHHHHH
Confidence 999999999999999999999972 33333333211 21 1123 788999999999999999999999
Q ss_pred HHHHHhhc----------------------------cCCcchhhhhccCcceeEEEEEeC
Q psy1213 435 AANRLVRE----------------------------DGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 435 ~v~qL~~~----------------------------~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++++|+++ ..+++|+++++.||.++++||++.
T Consensus 363 ~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~~ 422 (424)
T PRK06333 363 TILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRRW 422 (424)
T ss_pred HHHHHhcCCcCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEEEecc
Confidence 99999973 125677888999999999999875
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=260.31 Aligned_cols=277 Identities=21% Similarity=0.262 Sum_probs=202.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCC--------------------------CCCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQE--------------------------VKTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~--------------------------~~~~~~a~~ia~~lG 119 (472)
...+|+++++++||+|+|++++++| ++++|+.... ......+.+++..+|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG 150 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence 3567999999999999999999888 5777754321 001224567899999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ .+|.++++++|+|++.||..|+++|++|++|++||+|+|.+.. |...
T Consensus 151 l--~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~-~~~~----------------------------- 198 (411)
T PRK07314 151 A--KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAIT-PLGI----------------------------- 198 (411)
T ss_pred C--CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCC-HHHH-----------------------------
Confidence 9 5899999999999999999999999999999999999987542 1100
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t 279 (472)
.+..+.+++. .. ..+|.... +||+.+
T Consensus 199 ------------------~~~~~~~~ls-------------------------~~---~~~p~~~~-~pfd~~------- 224 (411)
T PRK07314 199 ------------------AGFAAARALS-------------------------TR---NDDPERAS-RPFDKD------- 224 (411)
T ss_pred ------------------HHHHHhcccc-------------------------CC---CCCCCcCc-CCCcCC-------
Confidence 0000000000 00 01333221 233221
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccC-----CcccccccHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQD-----PKDQLLLGPAYATP 354 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~~a~~ 354 (472)
.++..++|||+++||++++.|++++.+++++|+|++...+. |. ....+...+++
T Consensus 225 --------------------~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~-~~~~~~~~a~~ 283 (411)
T PRK07314 225 --------------------RDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPA-PDGEGAARAMK 283 (411)
T ss_pred --------------------CCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC-CCcHHHHHHHH
Confidence 35566999999999999999999999999999999987541 21 12344678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcch-HHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFA-GQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~-~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||+++|++++|||++|.|++++ ..+.++++++... |.. ...+++++..+..+|||.+|+|+.+++
T Consensus 284 ~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~-~~~------------~~~~~~v~s~k~~~Gh~~~AsG~~~~i 350 (411)
T PRK07314 284 LALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRV-FGE------------HAYKVAVSSTKSMTGHLLGAAGAVEAI 350 (411)
T ss_pred HHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHH-hcc------------cCCCCeeECccchhchhHHHHHHHHHH
Confidence 99999999999999999999999 5677777777621 111 011244444445579999999999999
Q ss_pred HHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
.++++|+++. .++.++++++.||.++++||++.
T Consensus 351 ~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 351 FSVLAIRDQVIPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred HHHHHHhCCCcCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEecC
Confidence 9999998751 14678889999999999999975
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=260.84 Aligned_cols=272 Identities=20% Similarity=0.265 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCE----EEEEeecCCC--------------------------CCChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDY----IVYGTVIQEV--------------------------KTSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~----vi~g~~~~~~--------------------------~~~~~a~~ia~~lGl 120 (472)
..+|+++++++||+|+|++++++|. +++|+..+.. ....++.+++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4679999999999999999999885 6666432210 011245678899999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
.+|.++++++|+|++.||.+|++.|++|++|++||+|+|.+.. |... .
T Consensus 151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~~~-----~------------------------ 198 (407)
T TIGR03150 151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAIT-PLGI-----A------------------------ 198 (407)
T ss_pred --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCC-HHHH-----H------------------------
Confidence 6899999999999999999999999999999999999997542 1100 0
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCH
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTP 280 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~ 280 (472)
+..+.+++.+++. .|.. ..+|++.+
T Consensus 199 ------------------~~~~~~~ls~~~~----------------------------~~~~-~~~pfd~~-------- 223 (407)
T TIGR03150 199 ------------------GFAAMKALSTRND----------------------------DPEK-ASRPFDKD-------- 223 (407)
T ss_pred ------------------HHHHhCcccCCCC----------------------------CCCc-CCCCCcCC--------
Confidence 0000000000000 1110 01222211
Q ss_pred HHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHHHH
Q psy1213 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATPQV 356 (472)
Q Consensus 281 ~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~~A 356 (472)
.++..++|||+++||++++.|++++.+++++|+|++...+... .....+...++++|
T Consensus 224 -------------------~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~A 284 (407)
T TIGR03150 224 -------------------RDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAA 284 (407)
T ss_pred -------------------CCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHH
Confidence 2334489999999999999999999999999999998654211 11233467899999
Q ss_pred HHHcCCCcCCcCEEEccCcch----HHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFA----GQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLT 432 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~----~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v 432 (472)
|++||++++|||++|+|++++ ..|..+++.+ |..+ ..++| ||..+++ +|||.+|+|+.++
T Consensus 285 l~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~----~~~~-------~~~~~---v~s~k~~--~Gh~~~AsG~~~~ 348 (407)
T TIGR03150 285 LKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRV----FGDH-------AYKLA---VSSTKSM--TGHLLGAAGAIEA 348 (407)
T ss_pred HHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHH----hccC-------CCCCc---eeCCcch--hchhHHHHHHHHH
Confidence 999999999999999999999 4455555433 2111 01245 7777766 4999999999999
Q ss_pred HHHHHHHhhc-----------------------c----CCcchhhhhccCcceeEEEEE
Q psy1213 433 VHAANRLVRE-----------------------D----GQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 433 ~e~v~qL~~~-----------------------~----g~~gl~~~~~~GG~~~a~~l~ 464 (472)
+++++||+++ . .+++|+++++.||.++++||+
T Consensus 349 ~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 349 IFTVLAIRDGVVPPTINLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred HHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 9999999873 1 257788889999999999984
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-28 Score=252.93 Aligned_cols=281 Identities=19% Similarity=0.248 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcC-----ccCEEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 71 AHELARHSLIGILQKTGISKD-----LIDYIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~-----~Id~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
..+|+++|+++||+|+|+++. +..++++|+..+.. ....++.+++..+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 567999999999999998642 34578888653321 01124567999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ .+|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. +... ..+.
T Consensus 173 l--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~~~-----~~~~-------------------- 224 (437)
T PLN02836 173 F--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSID-ALSI-----AGFS-------------------- 224 (437)
T ss_pred C--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHH-----HHHH--------------------
Confidence 9 6999999999999999999999999999999999999987421 1000 0000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t 279 (472)
....+..+++. +|.. ..+|++.+
T Consensus 225 ---------------------~~~~l~~~~~~----------------------------~p~~-~~~pfd~~------- 247 (437)
T PLN02836 225 ---------------------RSRALSTKFNS----------------------------CPTE-ASRPFDCD------- 247 (437)
T ss_pred ---------------------HhhhhhcccCC----------------------------Cccc-ccCCcccC-------
Confidence 00000000010 1211 11233211
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccc----ccccHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ----LLLGPAYATPQ 355 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~----~~~~~~~a~~~ 355 (472)
.++..++|||+++||++++.|+++|.+++++|.|++...+..... ...+..+++++
T Consensus 248 --------------------~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~ 307 (437)
T PLN02836 248 --------------------RDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTR 307 (437)
T ss_pred --------------------CCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHH
Confidence 234448999999999999999999999999999999876521110 12234678999
Q ss_pred HHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 356 VLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 356 Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
||++||++++|||++|+|++++.. ...+.+++... |.+ ....+.+| |+..+|. +||+.+|+|+.+++.
T Consensus 308 Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~-~~~-----~~~~~~~~---v~s~K~~--~GH~~~AsG~~~li~ 376 (437)
T PLN02836 308 ALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTV-FSE-----HATSGGLA---FSSTKGA--TGHLLGAAGAVEAIF 376 (437)
T ss_pred HHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHH-hcc-----cccCCCCe---eECCccc--ccccHHHHHHHHHHH
Confidence 999999999999999999999953 44444444310 211 11123356 7777775 599999999999999
Q ss_pred HHHHHhhcc----------------------------CCcchhhhhccCcceeEEEEEeCC
Q psy1213 435 AANRLVRED----------------------------GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 435 ~v~qL~~~~----------------------------g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
++++|+++. .+++|+++++.||.++++||++.|
T Consensus 377 ~~l~l~~~~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 377 SVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred HHHHHhcCccCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecCC
Confidence 999998751 135677889999999999999875
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=232.03 Aligned_cols=240 Identities=25% Similarity=0.277 Sum_probs=208.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHH
Q psy1213 69 MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIA 148 (472)
Q Consensus 69 ~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~ 148 (472)
.+..+|+.+|++++|+++|+++++||.+++++..++...+..+.+++..+|++ ++++++++.+|+|++.+|+.|.++|+
T Consensus 5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999888765688899999999997 79999999999999999999999999
Q ss_pred cCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHH
Q psy1213 149 AGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAA 228 (472)
Q Consensus 149 sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 228 (472)
+|++|.+||+|+|..
T Consensus 84 ~g~~~~~lv~~~e~~----------------------------------------------------------------- 98 (254)
T cd00327 84 NGKADIVLAGGSEEF----------------------------------------------------------------- 98 (254)
T ss_pred CCCCCEEEEEeccee-----------------------------------------------------------------
Confidence 999999999998740
Q ss_pred hCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcc
Q psy1213 229 FKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDG 308 (472)
Q Consensus 229 ~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DG 308 (472)
.++||
T Consensus 99 ---------------------------------------------------------------------------~~gdG 103 (254)
T cd00327 99 ---------------------------------------------------------------------------VFGDG 103 (254)
T ss_pred ---------------------------------------------------------------------------eecce
Confidence 05999
Q ss_pred eeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc---cccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHH
Q psy1213 309 ASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD---QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLK 385 (472)
Q Consensus 309 AAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~---~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~e 385 (472)
|+|+||++++.+++++.+++.+|.++....+.+.. .......++++++|+++|++++|||++++|++++.......+
T Consensus 104 Aaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~ 183 (254)
T cd00327 104 AAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVEL 183 (254)
T ss_pred EEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHH
Confidence 99999999999999988888999998876543321 123345789999999999999999999999999987777778
Q ss_pred hcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc-------cCCcchhhhhccCcce
Q psy1213 386 AMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE-------DGQFGLIAACAAGGQG 458 (472)
Q Consensus 386 alg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~-------~g~~gl~~~~~~GG~~ 458 (472)
.++ +++.+. ..+|+.++...+||+.+|++...+.+++++++.+ .+++.+..+++.||.+
T Consensus 184 ~~~---~~~~~~-----------~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~ 249 (254)
T cd00327 184 ALG---LDPDGV-----------RSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTN 249 (254)
T ss_pred HHH---HHHhCC-----------CCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcc
Confidence 887 444221 1268889999999999999999999999999987 7789999999999999
Q ss_pred eEEEE
Q psy1213 459 VGMII 463 (472)
Q Consensus 459 ~a~~l 463 (472)
.++||
T Consensus 250 ~~~~l 254 (254)
T cd00327 250 AAVVL 254 (254)
T ss_pred eEEEC
Confidence 88875
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=213.27 Aligned_cols=122 Identities=48% Similarity=0.785 Sum_probs=106.4
Q ss_pred CCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCC
Q psy1213 326 KPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGV 405 (472)
Q Consensus 326 ~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~ 405 (472)
+|+++|.+++..+.+|.. +..++..|++++|+++|++++|||++|+||+|+++++..+|+||
T Consensus 2 ~pla~i~~~~~~~~~P~~-~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg----------------- 63 (123)
T PF02803_consen 2 KPLARIVGYASAGVDPED-MGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLEALG----------------- 63 (123)
T ss_dssp -ESEEEEEEEEEE--GGG-GGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHT-----------------
T ss_pred CeEEEEEEEEEEecCHHH-hCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhcccc-----------------
Confidence 588999999999888875 78899999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 406 PDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 406 ~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++..+||++||.+++|||.||||+++++++++||+++.+++|++++|++||++.++||||
T Consensus 64 ~~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 64 LDPEKVNPNGGALALGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp TGGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTEEEEEEEEE
T ss_pred ccccccCcccccccccccccccccchhhhhHHHHHHhchhhhhHHhcccceeeEEEEEEC
Confidence 345569999999999999999999999999999999999999999999999999999997
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-28 Score=236.37 Aligned_cols=285 Identities=23% Similarity=0.177 Sum_probs=215.8
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.+.+|.|+|.|+|++.++|.++++... +.||.. ||++.+|+...++++..+|+.+|+++||+++|++|+|||.||+
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~--rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~ 79 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIET--RTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIV 79 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeee--ecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 366799999999999999999996664 899998 9999998877779999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHH
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLL 178 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~ 178 (472)
.+.+|+...|..|..++..||+. ++++|+++.+|+|+++||..|..+|++|.++.+||+|.|.+|+.-...
T Consensus 80 aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld~~-------- 150 (323)
T COG0332 80 ATSTPDHLFPSTACLVQARLGLG-GAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWT-------- 150 (323)
T ss_pred EcCCcccCCChHHHHHHHHhCCC-CcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCCHh--------
Confidence 99999998899999999999996 689999999999999999999999999999999999999986521000
Q ss_pred HhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC
Q psy1213 179 LRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD 258 (472)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~ 258 (472)
T Consensus 151 -------------------------------------------------------------------------------- 150 (323)
T COG0332 151 -------------------------------------------------------------------------------- 150 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEec
Q psy1213 259 ILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS 338 (472)
Q Consensus 259 ~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~ 338 (472)
| + ..|-..+|||+|+||...+ .+.+.-. ..+..-+...
T Consensus 151 -------------d--------------------R------~t~vlFgDGAgAvvl~~~~--~~~~i~~-~~l~sdg~~~ 188 (323)
T COG0332 151 -------------D--------------------R------DTCVLFGDGAGAVVLEATE--DDNGILD-TDLGSDGSQG 188 (323)
T ss_pred -------------h--------------------c------cceEEEcCCceEEEEecCC--CCcCeee-eeeeccccCC
Confidence 0 0 0122379999999999876 1221100 0111100000
Q ss_pred ----------cC-C-----ccccccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhh
Q psy1213 339 ----------QD-P-----KDQLLLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWF 392 (472)
Q Consensus 339 ----------~~-p-----~~~~~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~ 392 (472)
.. + ......+ ...+++++|+.+|++++|||++-.|-.-.-..-...+.||
T Consensus 189 ~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~---- 264 (323)
T COG0332 189 DLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLG---- 264 (323)
T ss_pred CeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccccccHHHHHHHHHHcC----
Confidence 00 0 0000111 1477899999999999999999999988766666778888
Q ss_pred hhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcce
Q psy1213 393 AKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQG 458 (472)
Q Consensus 393 ~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~ 458 (472)
+|.+++..+-. -+|+...||=-..+.+++++=+=+.|++.|..+ .+||..
T Consensus 265 -------------~~~~k~~~~~~--~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~-fG~Glt 314 (323)
T COG0332 265 -------------IPEEKVVVTVD--KYGNTSAASIPLALDEALREGRIKPGDLVLLEA-FGGGLT 314 (323)
T ss_pred -------------CCHHHHhhHHH--HhcccccchHHHHHHHHhhhCCCCCCCEEEEEe-ecCcce
Confidence 45544443322 268888888887888887776666676666543 335553
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-28 Score=249.12 Aligned_cols=281 Identities=19% Similarity=0.215 Sum_probs=197.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-cCccCE----EEEEeecCCCC--------------------------CChHHHHHHHH
Q psy1213 69 MMAHELARHSLIGILQKTGIS-KDLIDY----IVYGTVIQEVK--------------------------TSNIGREAALS 117 (472)
Q Consensus 69 ~~~~~La~~A~~~Al~~agi~-~~~Id~----vi~g~~~~~~~--------------------------~~~~a~~ia~~ 117 (472)
....+|++.++++||+|+|++ +++++. +++|+..+... ...++.+++..
T Consensus 75 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 154 (421)
T PTZ00050 75 SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK 154 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence 446889999999999999998 677764 44444322110 01245678899
Q ss_pred cCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhcc
Q psy1213 118 AGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATI 197 (472)
Q Consensus 118 lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (472)
+|+ ++|+++++++|+|++.||.+|+++|++|++|++||+|+|.+. .|.... .+. ..
T Consensus 155 ~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~-~p~~~~-----~f~----------------~~ 210 (421)
T PTZ00050 155 HKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASI-TPVSFA-----GFS----------------RM 210 (421)
T ss_pred hCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccC-CHHHHH-----HHH----------------hh
Confidence 999 699999999999999999999999999999999999999743 221100 000 00
Q ss_pred CCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCcc
Q psy1213 198 RPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRV 277 (472)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~ 277 (472)
+ .+..++.. .|.. ..+||+.+
T Consensus 211 ---------------------~----~l~~~~~~----------------------------~p~~-~~~pfd~~----- 231 (421)
T PTZ00050 211 ---------------------R----ALCTKYND----------------------------DPQR-ASRPFDKD----- 231 (421)
T ss_pred ---------------------h----ccccCcCC----------------------------CCCc-cCCCCcCC-----
Confidence 0 00000000 1110 01233322
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYAT 353 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~ 353 (472)
..|.+ ++|||+++||++++.|+++|.+++++|+|++...+... .....+..+++
T Consensus 232 ---------------~~G~~-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai 289 (421)
T PTZ00050 232 ---------------RAGFV-------MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCM 289 (421)
T ss_pred ---------------CCCEe-------eccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHH
Confidence 23444 79999999999999999999999999999998765211 11234568899
Q ss_pred HHHHHH-cCCCcCCcCEEEccCcch-HHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHH
Q psy1213 354 PQVLER-AGLSLSDIDAWEVHEAFA-GQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRL 431 (472)
Q Consensus 354 ~~Al~~-Agl~~~dId~~e~hd~f~-~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~ 431 (472)
++||++ ||++++|||++|+|++++ ..+.++++++... |.+ .. ..++.++.-+..+||+.+|+|+.+
T Consensus 290 ~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~-~~~----------~~-~~~~~v~s~K~~~GH~~~AaG~~~ 357 (421)
T PTZ00050 290 ENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKV-FGD----------SG-APKLYVSSTKGGLGHLLGAAGAVE 357 (421)
T ss_pred HHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHH-hcc----------cc-CCCceEECccccccccHHHHHHHH
Confidence 999999 999999999999999999 3455555555311 211 01 022445555557999999999999
Q ss_pred HHHHHHHHhhcc-----------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 432 TVHAANRLVRED-----------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 432 v~e~v~qL~~~~-----------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++.+++.|+.+. -++.|+++++.||.++++||++.
T Consensus 358 l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 358 SIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred HHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeCC
Confidence 999999998641 14567788999999999999873
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-27 Score=236.08 Aligned_cols=277 Identities=17% Similarity=0.220 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHHHHcCCC--cCccCEEEEEeecCCC------------C--------------CChHHHHHHHHcCCCC
Q psy1213 71 AHELARHSLIGILQKTGIS--KDLIDYIVYGTVIQEV------------K--------------TSNIGREAALSAGFSD 122 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~--~~~Id~vi~g~~~~~~------------~--------------~~~~a~~ia~~lGl~~ 122 (472)
..++++.|+++||+++|+. ++++ ++++|+..+.. . ...++.+++..+|+
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l-- 80 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF-- 80 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC--
Confidence 4678999999999999974 3443 57777654431 0 11356788999999
Q ss_pred CCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCC
Q psy1213 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFF 202 (472)
Q Consensus 123 ~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (472)
++|++++.++|+|++.||..|+++|++|++|++||+|+|.... |... ..|.
T Consensus 81 ~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~-~~~~-----~~f~----------------------- 131 (342)
T PRK14691 81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVID-TVSL-----AGFA----------------------- 131 (342)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHH-----HHHH-----------------------
Confidence 6999999999999999999999999999999999999987421 1000 0000
Q ss_pred CCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHH
Q psy1213 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQ 282 (472)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~ 282 (472)
..+.+. ... ...|... .+||+.+
T Consensus 132 -------------------~~~~ls-------------------------~~~--~~~p~~~-~rPFd~~---------- 154 (342)
T PRK14691 132 -------------------AARALS-------------------------THF--NSTPEKA-SRPFDTA---------- 154 (342)
T ss_pred -------------------Hhhhhh-------------------------cCC--CCCCCcC-CCCCCCC----------
Confidence 000000 000 0012111 2455433
Q ss_pred HhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHHHHHH
Q psy1213 283 MAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATPQVLE 358 (472)
Q Consensus 283 ~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~~Al~ 358 (472)
++|.+ ++|||+++||++++.|+++|.+++++|+|++...+... .....++..++++||+
T Consensus 155 ----------r~G~v-------~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~ 217 (342)
T PRK14691 155 ----------RDGFV-------MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALR 217 (342)
T ss_pred ----------CCCcc-------ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 35666 89999999999999999999999999999999876421 1134556899999999
Q ss_pred HcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~ 437 (472)
++||+++|||++|+|++++.. +..+++++... |.+. ..+| |+... -.+||+.+|+|+.+++.+++
T Consensus 218 ~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~-fg~~--------~~~~---v~s~K--~~~GH~~~AaG~~~~~~~~l 283 (342)
T PRK14691 218 QAGITPEQVQHLNAHATSTPVGDLGEINAIKHL-FGES--------NALA---ITSTK--SATGHLLGAAGGLETIFTVL 283 (342)
T ss_pred HcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHH-hCCC--------CCce---EECCc--ccccCCcchhhHHHHHHHHH
Confidence 999999999999999999963 44555454421 3110 1134 44333 34899999999999999999
Q ss_pred HHhhcc----------------------------CCcchhhhhccCcceeEEEEEeCC
Q psy1213 438 RLVRED----------------------------GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 438 qL~~~~----------------------------g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+|+.+- .++.|+++++.||.++++||+++-
T Consensus 284 ~l~~~~ippt~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~~~ 341 (342)
T PRK14691 284 ALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKRWV 341 (342)
T ss_pred HHhCCccCCcCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEeecc
Confidence 997641 145678889999999999999863
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=239.40 Aligned_cols=275 Identities=21% Similarity=0.235 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC--------------------------CChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK--------------------------TSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~--------------------------~~~~a~~ia~~lGl 120 (472)
...+++.++++||+|+|+++.+.+ ++++|+..+... ...++.+++..+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 456889999999999999765444 588887543210 11367789999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
++|+++++++|+|++.||..|+++|++|++|++||+|+|.... |... .+|. .
T Consensus 154 --~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~-----~~f~----------------~---- 205 (414)
T PRK08722 154 --RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAST-PLGM-----AGFG----------------A---- 205 (414)
T ss_pred --CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHH-----HHHH----------------H----
Confidence 6999999999999999999999999999999999999997532 1100 0000 0
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC--CCccceeccceeeccCCCccC
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT--DILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~--~~~P~a~~~~~~~~de~~~~~ 278 (472)
.+.+. ...|.. ..+||+.+
T Consensus 206 ----------------------------------------------------~~~ls~~~~~p~~-~~rpfd~~------ 226 (414)
T PRK08722 206 ----------------------------------------------------AKALSTRNDEPQK-ASRPWDKD------ 226 (414)
T ss_pred ----------------------------------------------------cCCcccCCCCCcc-ccCcCcCC------
Confidence 00000 001111 11344322
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~ 354 (472)
.+|.+ ++||++++||++++.|+++|.+++++|.|++..++.... ....+..++++
T Consensus 227 --------------~~G~~-------~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~ 285 (414)
T PRK08722 227 --------------RDGFV-------LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAME 285 (414)
T ss_pred --------------CCceE-------eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHH
Confidence 34666 899999999999999999999999999999987652110 11223478999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||+++|++++|||++|+|++++.. +..+.++|... |.+.. ...+| |+... -.+||+.+|+|+.+++
T Consensus 286 ~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~-fg~~~------~~~~~---v~s~K--~~~GH~~~AaG~~~~~ 353 (414)
T PRK08722 286 AAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRA-LGEAG------SKQVL---VSSTK--SMTGHLLGAAGSVEAI 353 (414)
T ss_pred HHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHH-hcccC------CCCce---eeCcc--cccccchHHHHHHHHH
Confidence 9999999999999999999999963 55555555421 32210 00123 43332 3489999999999999
Q ss_pred HHHHHHhhcc----------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 434 HAANRLVRED----------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 434 e~v~qL~~~~----------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
.++++|+.+- -++.|+++++.||.++++||++
T Consensus 354 ~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 354 ITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred HHHHHHhcCccCCCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 9999998641 1456777889999999999986
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=240.47 Aligned_cols=273 Identities=22% Similarity=0.224 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC-------------------CChHHHHHHHHcCCCCCCcee
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK-------------------TSNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~-------------------~~~~a~~ia~~lGl~~~~~~~ 127 (472)
...|+++|+++||+|+|+++++|| +|++|+...++. ....+..++..+|+ +++++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl--~g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL--RGPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC--CCCcc
Confidence 456999999999999999999998 789887654321 23356779999999 57999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+++.+|+|++.||..|.++|++|++|++||+|+|.+...... ..+. .
T Consensus 165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~------~~~~----------------~----------- 211 (424)
T smart00825 165 TVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTF------VGFS----------------R----------- 211 (424)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHH------HHHh----------------h-----------
Confidence 999999999999999999999999999999999875321000 0000 0
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCC
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLK 287 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~ 287 (472)
.+.+ .|... .+|++.+
T Consensus 212 ---------------------------------------------~~~l---~~~~~-~~pf~~~--------------- 227 (424)
T smart00825 212 ---------------------------------------------AGML---SPDGR-CKTFDAD--------------- 227 (424)
T ss_pred ---------------------------------------------cCCC---CCCCC-CCCCCCC---------------
Confidence 0000 01000 0122111
Q ss_pred CcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHHHHHHHcCCC
Q psy1213 288 PAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATPQVLERAGLS 363 (472)
Q Consensus 288 p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~Al~~Agl~ 363 (472)
.++..++|||+++||++++.|++++.+++++|.|++...+.... ....+...++++||+++|++
T Consensus 228 ------------~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~ 295 (424)
T smart00825 228 ------------ADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVD 295 (424)
T ss_pred ------------CCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 23344899999999999999999999999999999987542211 01223468999999999999
Q ss_pred cCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc-ccCCCCCcHHHHHHHHHHHHhh
Q psy1213 364 LSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS-IGHPFAATGVRLTVHAANRLVR 441 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a-~Ghp~gasG~~~v~e~v~qL~~ 441 (472)
++|||+++.|++++.. +..+.+++... |.. .....+++| | ++.++ +||+.+|+|+.+++++++||+.
T Consensus 296 ~~dId~i~~h~tgt~~~d~~E~~al~~~-~~~----~~~~~~~~~---v---~s~k~~~Gh~~~AsG~~~l~~~~~~l~~ 364 (424)
T smart00825 296 PADVDYVEAHGTGTPLGDPIEAEALAAV-FGQ----GRPRDGPLL---L---GSVKSNIGHLEAAAGVAGLIKVVLALRH 364 (424)
T ss_pred HHHccEEEeeCCCCCCCCHHHHHHHHHH-Hhc----cCCCCCceE---E---eccccccCCcccchhHHHHHHHHHHHhC
Confidence 9999999999999863 44444444310 111 111122233 3 45555 6999999999999999999986
Q ss_pred cc-----------------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 442 ED-----------------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 442 ~~-----------------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+- .++.++++++.||.+++++|+.
T Consensus 365 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~ 423 (424)
T smart00825 365 GTIPPTLHFETPNPHIDLEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILEE 423 (424)
T ss_pred CCCCCCCCCCCCCCCCCcccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEec
Confidence 41 2455677889999999999985
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=233.10 Aligned_cols=275 Identities=18% Similarity=0.188 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC--EEEEEeecC----------------CCCC---------ChHHHHHHHHcCCCCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID--YIVYGTVIQ----------------EVKT---------SNIGREAALSAGFSDK 123 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id--~vi~g~~~~----------------~~~~---------~~~a~~ia~~lGl~~~ 123 (472)
..+|++.|+++||+|+|+++.+.+ ++++|+... .... ..++.+++..+|+ +
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl--~ 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI--R 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC--C
Confidence 567999999999999998643222 455654321 0000 1256678899999 5
Q ss_pred CceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCC
Q psy1213 124 TPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFI 203 (472)
Q Consensus 124 ~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (472)
+|+++++++|+|++.||..|+++|++|++|.+||+|++..-. +... .++. .
T Consensus 158 G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~~~~-----~~~~----------------~------- 208 (410)
T PRK07103 158 GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-YWEC-----QALR----------------S------- 208 (410)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHH-----HHHH----------------H-------
Confidence 899999999999999999999999999999999999874211 1000 0000 0
Q ss_pred CCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHH
Q psy1213 204 PELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQM 283 (472)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~ 283 (472)
++. ++. ..+ ..+|.... +||+.+
T Consensus 209 --------------~~~----------l~~-------------------~~~--~~~p~~~~-rPfd~~----------- 231 (410)
T PRK07103 209 --------------LGA----------MGS-------------------DRF--ADEPEAAC-RPFDQD----------- 231 (410)
T ss_pred --------------ccc----------ccc-------------------Ccc--CCCcccCc-CCCCCC-----------
Confidence 000 000 000 00232222 244322
Q ss_pred hcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--cccccHHHHHHHHHHHcC
Q psy1213 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--QLLLGPAYATPQVLERAG 361 (472)
Q Consensus 284 ~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~~~~~~~~a~~~Al~~Ag 361 (472)
.++..++|||+++||++++.|++++.+++++|.|++...+.... ....+..+++++||++||
T Consensus 232 ----------------~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Ag 295 (410)
T PRK07103 232 ----------------RDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAG 295 (410)
T ss_pred ----------------CCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 24444899999999999999999999999999999987642111 112334689999999999
Q ss_pred CCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHh
Q psy1213 362 LSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLV 440 (472)
Q Consensus 362 l~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~ 440 (472)
++++|||+++.|++++.. +..++++|- . .+ .+.+| |+..++.+ ||+.+|+|+.+++.++++|+
T Consensus 296 i~~~dId~v~~hgtgt~~~D~~E~~al~----~---~~----~~~~~---v~s~k~~~--Gh~~~AsG~~~l~~~~l~l~ 359 (410)
T PRK07103 296 LGPEDIDYVNPHGTGSPLGDETELAALF----A---SG----LAHAW---INATKSLT--GHGLSAAGIVELIATLLQMR 359 (410)
T ss_pred CCHHHCCEEEccCCCCCCCCHHHHHHHh----c---CC----CCCCe---EECCCccc--ccCchhhhHHHHHHHHHHHh
Confidence 999999999999999974 456666651 1 00 12356 88888774 99999999999999999998
Q ss_pred hcc--------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 441 RED--------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 441 ~~~--------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++. .++.|+++++.||.++++||++
T Consensus 360 ~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 360 AGFLHPSRNLDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CCeeCCCCCCCCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEeC
Confidence 641 1467788899999999999985
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=227.90 Aligned_cols=278 Identities=23% Similarity=0.261 Sum_probs=202.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-cCccC---EEEEEeecCCCC---------------------------CChHHHHHHHH
Q psy1213 69 MMAHELARHSLIGILQKTGIS-KDLID---YIVYGTVIQEVK---------------------------TSNIGREAALS 117 (472)
Q Consensus 69 ~~~~~La~~A~~~Al~~agi~-~~~Id---~vi~g~~~~~~~---------------------------~~~~a~~ia~~ 117 (472)
....+|+..|+.+||+|+|++ ....+ ++++|+...... ....+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 357889999999999999997 33343 355665443321 01245678999
Q ss_pred cCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecc-cCCCcccchhhhHHHHHhhccCCCchhhhhhhhc
Q psy1213 118 AGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEF-MSDIPIRHSRKMRSLLLRANKAKTPADRLKLLAT 196 (472)
Q Consensus 118 lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (472)
+|+ .++.+++.++|+++.++|..|+++|+.|++|++|++|+|. ++..... +|.
T Consensus 149 ~g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~-------gF~----------------- 202 (412)
T COG0304 149 FGL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIA-------GFE----------------- 202 (412)
T ss_pred hCC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHH-------HHH-----------------
Confidence 999 6999999999999999999999999999999999999986 3211100 000
Q ss_pred cCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCc
Q psy1213 197 IRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVR 276 (472)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~ 276 (472)
+ .+|.... +..|...+ +|++++
T Consensus 203 -------------------------a-------------------------m~Alst~---nd~p~~as-rPfd~~---- 224 (412)
T COG0304 203 -------------------------A-------------------------MRALSTR---NDDPEKAS-RPFDKN---- 224 (412)
T ss_pred -------------------------H-------------------------HHHhccC---CCCccccC-CCCCCC----
Confidence 0 0000000 00233222 455443
Q ss_pred cCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc-----CCcccccccHHH
Q psy1213 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ-----DPKDQLLLGPAY 351 (472)
Q Consensus 277 ~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~~ 351 (472)
++|++ ++|||+++||++.|.|+++|.++|++|.|++...+ .|.. .+.+..+
T Consensus 225 ----------------RdGfv-------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p-~g~Ga~~ 280 (412)
T COG0304 225 ----------------RDGFV-------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAP-DGEGAIR 280 (412)
T ss_pred ----------------CCCEE-------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCC-CCchHHH
Confidence 56888 99999999999999999999999999999999776 2321 3667789
Q ss_pred HHHHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHH
Q psy1213 352 ATPQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVR 430 (472)
Q Consensus 352 a~~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~ 430 (472)
++++||++||++++||||++.|.+.|. .+..+.+++... |.++ + .++.++..+-.+||++||+|..
T Consensus 281 am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~v-fg~~-----------~-~~~~vsstKs~tGH~lGAaGav 347 (412)
T COG0304 281 AMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRV-FGEH-----------A-KSLPVSSTKSLTGHTLGAAGAV 347 (412)
T ss_pred HHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHH-hccc-----------c-cCceeeecccccccChhhHHHH
Confidence 999999999999999999999999994 344444444311 3221 1 1133555555699999999999
Q ss_pred HHHHHHHHHhhc----------------------------cCCcchhhhhccCcceeEEEEEeCC
Q psy1213 431 LTVHAANRLVRE----------------------------DGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 431 ~v~e~v~qL~~~----------------------------~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+.+-+++.|+.. ..++.|.+++++||.|.++++.+.+
T Consensus 348 eai~~~l~l~~g~ippt~n~~~~dp~~~~l~~v~~~~~~~~~~~~lsnsfGFGG~Na~lv~~~~~ 412 (412)
T COG0304 348 EAIISLLALRDGIIPPTINLDNPDPEAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKRYQ 412 (412)
T ss_pred HHHHHHHHHhcCCcCCCCCcCCCCcccccccccCCcccccceeEEEecccccCCcceEEEEecCC
Confidence 999999999843 0246677899999999999999864
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=238.05 Aligned_cols=276 Identities=20% Similarity=0.218 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcC---ccC----EEEEEeecCCCC-------------------------CChHHHHHHHHc
Q psy1213 71 AHELARHSLIGILQKTGISKD---LID----YIVYGTVIQEVK-------------------------TSNIGREAALSA 118 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~---~Id----~vi~g~~~~~~~-------------------------~~~~a~~ia~~l 118 (472)
...+++.++++||+|+|++++ +++ +|++|+..+... ....+..++..+
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~ 278 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDL 278 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHh
Confidence 346888999999999999764 232 688887543210 012356788899
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ .+|.++++++|+|++.||..|+++|++|++|++||+|+|.... |.... +|
T Consensus 279 gl--~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~-p~~~~-----~f-------------------- 330 (540)
T PLN02787 279 GW--MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII-PIGLG-----GF-------------------- 330 (540)
T ss_pred CC--CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC-HHHHH-----HH--------------------
Confidence 99 6999999999999999999999999999999999999996321 11000 00
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccC
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~ 278 (472)
..-+.+ + .. + ..|... .+||+.+
T Consensus 331 ----------------------~~~~aL-------------S---~~-------~-----~~p~~~-~rPFD~~------ 353 (540)
T PLN02787 331 ----------------------VACRAL-------------S---QR-------N-----DDPTKA-SRPWDMN------ 353 (540)
T ss_pred ----------------------HHHHHh-------------h---cc-------C-----CCcccc-cCCcccC------
Confidence 000000 0 00 0 012111 1344432
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~ 354 (472)
.+|.+ ++|||+++||++++.|+++|.+++++|.|++...+.... ....+...+++
T Consensus 354 --------------rdGfv-------~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~ 412 (540)
T PLN02787 354 --------------RDGFV-------MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIE 412 (540)
T ss_pred --------------CCCcc-------cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHH
Confidence 34666 899999999999999999999999999999987652211 01234578999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||++||++++|||||+.|.+.|.. +..+.+++... |.+. ..+| |+...+ .+||+.||+|+.+++
T Consensus 413 ~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~-Fg~~--------~~~p---V~S~Ks--~iGH~~gAAGa~eli 478 (540)
T PLN02787 413 KALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRC-FGQN--------PELR---VNSTKS--MIGHLLGAAGAVEAI 478 (540)
T ss_pred HHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHH-hCCC--------CCce---eeCCCC--CcCCCcccchHHHHH
Confidence 9999999999999999999999853 45555555421 2110 0134 554443 389999999999999
Q ss_pred HHHHHHhhcc----------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVRED----------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~~----------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
.++++|+.+- .++.|+++++.||.++++||++.
T Consensus 479 ~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~~ 539 (540)
T PLN02787 479 ATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAPY 539 (540)
T ss_pred HHHHHHhcCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEeC
Confidence 9999998531 14567788999999999999975
|
|
| >KOG1394|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=220.06 Aligned_cols=276 Identities=24% Similarity=0.323 Sum_probs=206.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCcC---ccC----EEEEEeecCCCC--------------------------CChHHHHHHH
Q psy1213 70 MAHELARHSLIGILQKTGISKD---LID----YIVYGTVIQEVK--------------------------TSNIGREAAL 116 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~---~Id----~vi~g~~~~~~~--------------------------~~~~a~~ia~ 116 (472)
++..|++.|+++||+|+++.+. +.| +|.+|+..++.. ....+.+++.
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 5778999999999999998664 333 566665444310 0123567899
Q ss_pred HcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhc
Q psy1213 117 SAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLAT 196 (472)
Q Consensus 117 ~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (472)
.+|+ .+|..+++++|++|.++|-.|+++|+.|++|++|++|+|.--. |..+.
T Consensus 173 ~~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~-Plsla------------------------- 224 (440)
T KOG1394|consen 173 KYGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN-PLSLA------------------------- 224 (440)
T ss_pred hhcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec-chhhh-------------------------
Confidence 9999 6999999999999999999999999999999999999997321 21110
Q ss_pred cCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCc
Q psy1213 197 IRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVR 276 (472)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~ 276 (472)
+| ++.+|.. .+| -+|-..+ +||+++
T Consensus 225 --------------GF------------------------------~r~RALS-t~n-----d~P~~aS-RPfD~~---- 249 (440)
T KOG1394|consen 225 --------------GF------------------------------SRARALS-TRN-----DNPQKAS-RPFDKK---- 249 (440)
T ss_pred --------------hH------------------------------HHHHHhh-hcC-----CCccccC-CCCccC----
Confidence 10 0011111 001 1454433 455433
Q ss_pred cCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc-----CCcccccccHHH
Q psy1213 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ-----DPKDQLLLGPAY 351 (472)
Q Consensus 277 ~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~~ 351 (472)
++|++ ++||++.+||++.|+|+++|.+++++|+|||..++ .|.. .+.+...
T Consensus 250 ----------------RdGFV-------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~-dG~Ga~~ 305 (440)
T KOG1394|consen 250 ----------------RDGFV-------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDP-DGAGAVL 305 (440)
T ss_pred ----------------CCcee-------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCC-CcchHHH
Confidence 56888 89999999999999999999999999999999776 3432 4778899
Q ss_pred HHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCC-CcCCCCCCccccCCCCCcHH
Q psy1213 352 ATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLN-KFNNWGGSLSIGHPFAATGV 429 (472)
Q Consensus 352 a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~-~vN~~GG~~a~Ghp~gasG~ 429 (472)
++++||++|||+|+||||++.|.+.|.. +..+.+++... |++. +.. +||.+.| ++||.+||+|.
T Consensus 306 am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~v-f~~~-----------~~~~~vsStKg--aiGHLLGAAGa 371 (440)
T KOG1394|consen 306 AMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRV-FGEH-----------NIASKVSSTKG--AIGHLLGAAGA 371 (440)
T ss_pred HHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHH-hccC-----------Ccccccccccc--hhhhhcccccc
Confidence 9999999999999999999999999964 56666666532 4332 111 3666655 48999999999
Q ss_pred HHHHHHHHHHhhc-------------------------------cCCcchhhhhccCcceeEEEEEeC
Q psy1213 430 RLTVHAANRLVRE-------------------------------DGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 430 ~~v~e~v~qL~~~-------------------------------~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
.+.+..+..++.. .-+.+|.+++++||.++++++..+
T Consensus 372 vEAi~Tv~ai~~~~lpptlNlen~d~~~d~~~~~~~~~~~~~~~~~~valsNSFGFGGtNaSl~fa~~ 439 (440)
T KOG1394|consen 372 VEAIFTVLAINDGVLPPTLNLENPDPGVDLDYVPLKASEKKGGNKVRVALSNSFGFGGTNASLCFAKF 439 (440)
T ss_pred hhhHhhhhhhhcCccCCcccccCCCccccccccccccccccccccceEEEecccccCCcchhheeeec
Confidence 9999999988753 114788899999999999998754
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-25 Score=229.05 Aligned_cols=277 Identities=19% Similarity=0.180 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC------------------EEEEEeecC---------------CC-------CCChH
Q psy1213 71 AHELARHSLIGILQKTGISKDLID------------------YIVYGTVIQ---------------EV-------KTSNI 110 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id------------------~vi~g~~~~---------------~~-------~~~~~ 110 (472)
...|+..++++||+|+|++..+++ .++.++... .. ..+.+
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 467889999999999999643322 122222111 00 12346
Q ss_pred HHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhh
Q psy1213 111 GREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADR 190 (472)
Q Consensus 111 a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (472)
+.+++..+|+ ++++++++++|+|++.||.+|.++|++|++|++||+|+|..-. |.... .+.
T Consensus 155 a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~-~~~~~-----~~~----------- 215 (425)
T PRK06501 155 ADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS-AEALI-----RFS----------- 215 (425)
T ss_pred HHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHH-----HHH-----------
Confidence 7789999999 5899999999999999999999999999999999999985211 10000 000
Q ss_pred hhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-C-ccceeccce
Q psy1213 191 LKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-I-LPIQVGDKT 268 (472)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~-~P~a~~~~~ 268 (472)
. + +.+.. . .|. ...+|
T Consensus 216 -----~-----------------------------~---------------------------~~ls~~~~~~~-~~~rp 233 (425)
T PRK06501 216 -----L-----------------------------L---------------------------SALSTQNDPPE-KASKP 233 (425)
T ss_pred -----H-----------------------------h---------------------------hccccCCCCCC-cccCC
Confidence 0 0 00000 0 011 11134
Q ss_pred eeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----c
Q psy1213 269 ISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----Q 344 (472)
Q Consensus 269 ~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~ 344 (472)
|+.+ ++|.+ ++|||+++||++.+.|++++.+++++|.|++...+.... .
T Consensus 234 fd~~--------------------r~G~v-------~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~ 286 (425)
T PRK06501 234 FSKD--------------------RDGFV-------MAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSP 286 (425)
T ss_pred CCCC--------------------CCCee-------eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCC
Confidence 4322 23544 899999999999999999999999999999886542111 0
Q ss_pred ccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCC
Q psy1213 345 LLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPF 424 (472)
Q Consensus 345 ~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~ 424 (472)
.......++++||+++|++++|||+++.|++++.. ....|..+ +++.. +. ..+++| ||..++.+ ||+.
T Consensus 287 ~~~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~-~d~~E~~a---l~~~~-~~--~~~~~p---v~s~k~~~--Gh~~ 354 (425)
T PRK06501 287 DGSPAIGAIRAALADAGLTPEQIDYINAHGTSTPE-NDKMEYLG---LSAVF-GE--RLASIP---VSSNKSMI--GHTL 354 (425)
T ss_pred CHHHHHHHHHHHHHHcCCCHHHcCEEEecCccCcc-hHHHHHHH---HHHHh-cc--cCCCcE---EECCCccc--CCCc
Confidence 12234689999999999999999999999999864 22233333 23221 10 123466 88888875 9999
Q ss_pred CCcHHHHHHHHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeCC
Q psy1213 425 AATGVRLTVHAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 425 gasG~~~v~e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+|+|+.+++.++++|+++- -++.|+++++.||.++++||++.|
T Consensus 355 ~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 355 TAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred hhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 9999999999999998741 134566788999999999999876
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=228.57 Aligned_cols=265 Identities=21% Similarity=0.241 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHcCCCcCccC-EEEEEeecCCC-----------------------------CCChHHHHHHHHcCCCC
Q psy1213 73 ELARHSLIGILQKTGISKDLID-YIVYGTVIQEV-----------------------------KTSNIGREAALSAGFSD 122 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id-~vi~g~~~~~~-----------------------------~~~~~a~~ia~~lGl~~ 122 (472)
.++..++++||+|+|++++.-+ ++++|+..+.. ....++..++..+|+
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~-- 135 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT-- 135 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC--
Confidence 3667899999999999753211 57777753320 011246778999999
Q ss_pred CCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCC
Q psy1213 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFF 202 (472)
Q Consensus 123 ~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (472)
++|++++.++|+|++.||.+|+++|++|++|++||+|+|..-. |... ..|. .
T Consensus 136 ~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~-----~~~~----------------~------ 187 (381)
T PRK05952 136 QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-PLTL-----AGFQ----------------Q------ 187 (381)
T ss_pred CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHH-----HHHH----------------h------
Confidence 6899999999999999999999999999999999999986211 1100 0000 0
Q ss_pred CCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHH
Q psy1213 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQ 282 (472)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~ 282 (472)
.+.+. +.. .+||+.+
T Consensus 188 --------------------------------------------------~~~ls---~~~--~rPfd~~---------- 202 (381)
T PRK05952 188 --------------------------------------------------MGALA---KTG--AYPFDRQ---------- 202 (381)
T ss_pred --------------------------------------------------cCCcC---CCC--CCCCCCC----------
Confidence 00000 000 1233322
Q ss_pred HhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHHHHHH
Q psy1213 283 MAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATPQVLE 358 (472)
Q Consensus 283 ~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~Al~ 358 (472)
++|.+ ++||++++||++++.|++++.+++++|.|++...+.... .......+++++||+
T Consensus 203 ----------r~G~v-------~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~ 265 (381)
T PRK05952 203 ----------REGLV-------LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLA 265 (381)
T ss_pred ----------CCCcc-------ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 34555 899999999999999999999999999999987552111 122345789999999
Q ss_pred HcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~ 437 (472)
++|++++|||++|.|.+.+. .+..+.+++... | | .+++++..+..+||+.+|+|+.+++.+++
T Consensus 266 ~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~-f-----------g----~~~~v~s~K~~~GH~~~AaG~~~~~~~~~ 329 (381)
T PRK05952 266 RSGLTPEDIDYIHAHGTATRLNDQREANLIQAL-F-----------P----HRVAVSSTKGATGHTLGASGALGVAFSLL 329 (381)
T ss_pred HhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHH-c-----------C----CCCeeecchhhhccChHHHHHHHHHHHHH
Confidence 99999999999999999985 355555555411 1 1 12456666667999999999999999999
Q ss_pred HHhhcc------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 438 RLVRED------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 438 qL~~~~------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
.|+.+- -++.|+++++.||.++++||++
T Consensus 330 ~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 330 ALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred HHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEeC
Confidence 998641 1467788899999999999975
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=223.96 Aligned_cols=277 Identities=21% Similarity=0.127 Sum_probs=205.2
Q ss_pred eEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCC----cCccCEEEEEeecCCCC------------------
Q psy1213 49 IVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGIS----KDLIDYIVYGTVIQEVK------------------ 106 (472)
Q Consensus 49 ~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~----~~~Id~vi~g~~~~~~~------------------ 106 (472)
++|+|.+.+ ..+|+++|+++||+++|++ +++||.+++++..+.+.
T Consensus 2 ~~i~g~g~~-------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (332)
T cd00825 2 AVITGLGSY-------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVT 68 (332)
T ss_pred ceEEcccHH-------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhh
Confidence 467776665 6789999999999999999 89999999998766543
Q ss_pred ---CChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhcc
Q psy1213 107 ---TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANK 183 (472)
Q Consensus 107 ---~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~ 183 (472)
.+..+.+++..+|+ ++++++++.+|+|++.+|+.|.++|++|.+|++||+|+|.++..... .+.
T Consensus 69 ~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~-------~~~---- 135 (332)
T cd00825 69 KAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDC-------EFD---- 135 (332)
T ss_pred cccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHH-------HHH----
Confidence 45567889999999 58999999999999999999999999999999999999976431100 000
Q ss_pred CCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccce
Q psy1213 184 AKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQ 263 (472)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a 263 (472)
...+.. +|..
T Consensus 136 -------------------------------------------~~~~~~---------------------------~~~~ 145 (332)
T cd00825 136 -------------------------------------------AMGALS---------------------------TPEK 145 (332)
T ss_pred -------------------------------------------hhcccc---------------------------CCCC
Confidence 000000 1111
Q ss_pred eccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc
Q psy1213 264 VGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343 (472)
Q Consensus 264 ~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~ 343 (472)
.. ++++ ...++..++|||+|+||++++.|++++.+++++|.+++...+....
T Consensus 146 ~~-~~~~---------------------------~~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~ 197 (332)
T cd00825 146 AS-RTFD---------------------------AAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGM 197 (332)
T ss_pred CC-CCCC---------------------------CCCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCC
Confidence 10 1111 1135666899999999999999999998888999998875542211
Q ss_pred c----ccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc
Q psy1213 344 Q----LLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS 419 (472)
Q Consensus 344 ~----~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a 419 (472)
. .......+++++|+++|++++|||+++.|..+........+.++ +-..+. -+ ++....+..
T Consensus 198 ~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~---~~~~~~--------~~---~~~~~~~~~ 263 (332)
T cd00825 198 GAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLL---RSEFGD--------KS---PAVSATKAM 263 (332)
T ss_pred CCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHH---HHHhCC--------CC---ceeECCCcc
Confidence 0 11234678999999999999999999999999853222222332 111100 01 344445567
Q ss_pred ccCCCCCcHHHHHHHHHHHHhhc-------------------------cCCcchhhhhccCcceeEEEE
Q psy1213 420 IGHPFAATGVRLTVHAANRLVRE-------------------------DGQFGLIAACAAGGQGVGMII 463 (472)
Q Consensus 420 ~Ghp~gasG~~~v~e~v~qL~~~-------------------------~g~~gl~~~~~~GG~~~a~~l 463 (472)
+||+.+|+++.++++++++++.+ .+++.++.+++.||...++||
T Consensus 264 ~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 264 TGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred cccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 99999999999999999999987 678999999999999988875
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-25 Score=229.89 Aligned_cols=273 Identities=24% Similarity=0.265 Sum_probs=194.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccCE----EEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLIDY----IVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id~----vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
...+|+++++++||+|+|++++++|. +++++..+.. ..+.++.+++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 46679999999999999999887774 6666544321 11346778999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ ++++++++.+|+|++.||..|+++|++|++|++||+|+|.++. |+... .+. .
T Consensus 150 l--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~-p~~~~-----~~~----------------~--- 202 (406)
T cd00834 150 L--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALIT-PLTLA-----GFA----------------A--- 202 (406)
T ss_pred C--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccC-HHHHH-----HHH----------------h---
Confidence 9 5899999999999999999999999999999999999997642 11100 000 0
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC--CccceeccceeeccCCCcc
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD--ILPIQVGDKTISKDNGVRV 277 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~--~~P~a~~~~~~~~de~~~~ 277 (472)
.+.+.. ..|.... +|++.+
T Consensus 203 -----------------------------------------------------~~~l~~~~~~p~~~~-~pf~~~----- 223 (406)
T cd00834 203 -----------------------------------------------------LRALSTRNDDPEKAS-RPFDKD----- 223 (406)
T ss_pred -----------------------------------------------------cCCcCCCCCCCccCC-CCCCCC-----
Confidence 000000 0011110 122211
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYAT 353 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~ 353 (472)
.++..++|||+++||++.+.|++++.+++++|.|++...+.... ....+...++
T Consensus 224 ----------------------~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i 281 (406)
T cd00834 224 ----------------------RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAM 281 (406)
T ss_pred ----------------------CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHH
Confidence 12334899999999999999999999899999999886542110 1133457899
Q ss_pred HHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHH
Q psy1213 354 PQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLT 432 (472)
Q Consensus 354 ~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v 432 (472)
+++|+++|++++|||++++|++.+. .+..+++++... |... ..++| |+... ..+||+.+|+|+.++
T Consensus 282 ~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~-~~~~-------~~~~~---v~s~k--~~~Gh~~~AsG~~~l 348 (406)
T cd00834 282 RAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRV-FGEH-------AKKVP---VSSTK--SMTGHLLGAAGAVEA 348 (406)
T ss_pred HHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHH-hccc-------CCCCc---eeCcc--hhhccchhhhhHHHH
Confidence 9999999999999999999999984 355556665421 2111 01133 44444 447999999999999
Q ss_pred HHHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEE
Q psy1213 433 VHAANRLVRED---------------------------GQFGLIAACAAGGQGVGMII 463 (472)
Q Consensus 433 ~e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l 463 (472)
+.++++|+.+. .++.++++++.||.++++||
T Consensus 349 ~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 349 IATLLALRDGVLPPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred HHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 99999998651 14777888999999999986
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-25 Score=227.18 Aligned_cols=275 Identities=19% Similarity=0.178 Sum_probs=194.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCc-cC----EEEEEeecCCC----------------------CC--ChHHHHHHHHcCC
Q psy1213 70 MAHELARHSLIGILQKTGISKDL-ID----YIVYGTVIQEV----------------------KT--SNIGREAALSAGF 120 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~-Id----~vi~g~~~~~~----------------------~~--~~~a~~ia~~lGl 120 (472)
....|+++++++||+|+|+++++ ++ ++++|+..+.. .. ..++.+++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 46789999999999999998877 55 56666643211 11 4567889999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
. .+|+++++++|+|++.||..|+++|++|++|++||+|+|.++ |.... .|.. + .
T Consensus 151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~--~~~~~-----~f~~-------------~-----~ 204 (407)
T cd00828 151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL--EEGLS-----GFAN-------------M-----G 204 (407)
T ss_pred C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC--hHHHH-----HHHH-------------c-----C
Confidence 4 589999999999999999999999999999999999999876 32110 0100 0 0
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCH
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTP 280 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~ 280 (472)
.+ +.+ +..|... .+|++.+
T Consensus 205 ~l-----------------------------s~~-----------------------~~~~~~~-~~pfd~~-------- 223 (407)
T cd00828 205 AL-----------------------------STA-----------------------EEEPEEM-SRPFDET-------- 223 (407)
T ss_pred CC-----------------------------CCC-----------------------CCCCCcc-cCCCcCC--------
Confidence 00 000 0000000 0122211
Q ss_pred HHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccc---ccccHHHHHHHHH
Q psy1213 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ---LLLGPAYATPQVL 357 (472)
Q Consensus 281 ~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~---~~~~~~~a~~~Al 357 (472)
.++..++|||+++||++++.|+++|.+++++|.|++...+..... ...+..+++++||
T Consensus 224 -------------------~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al 284 (407)
T cd00828 224 -------------------RDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTAL 284 (407)
T ss_pred -------------------CCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHH
Confidence 233448999999999999999999999999999999876532211 1234578999999
Q ss_pred HHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
++||++++|||++|.|++++.. ...+.+++... |.+.+ ..+| |+... ..+||..+|+|+.+++.++
T Consensus 285 ~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~-~~~~~-------~~~~---v~s~K--~~~Gh~~~Asg~~~l~~~~ 351 (407)
T cd00828 285 AKAGLSLDDLDVISAHGTSTPANDVAESRAIAEV-AGALG-------APLP---VTAQK--ALFGHSKGAAGALQLIGAL 351 (407)
T ss_pred HHcCCCHHHcCEEecccccCccccHHHHHHHHHH-HhccC-------CCce---eeccc--chhccchhhhhHHHHHHHH
Confidence 9999999999999999999953 33444444311 32211 1133 44433 3489999999999999999
Q ss_pred HHHhhcc-----------------------------CCcchhhhhccCcceeEEEE
Q psy1213 437 NRLVRED-----------------------------GQFGLIAACAAGGQGVGMII 463 (472)
Q Consensus 437 ~qL~~~~-----------------------------g~~gl~~~~~~GG~~~a~~l 463 (472)
++|+++. .++.++++++.||.++++||
T Consensus 352 ~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 352 QSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred HHHhcCccCCCCCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 9998641 15678888999999999885
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=225.14 Aligned_cols=273 Identities=20% Similarity=0.243 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHHHHcCCCc---CccCEEEEEeecCCCC--------------------------CChHHHHHHHHcCCC
Q psy1213 71 AHELARHSLIGILQKTGISK---DLIDYIVYGTVIQEVK--------------------------TSNIGREAALSAGFS 121 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~---~~Id~vi~g~~~~~~~--------------------------~~~~a~~ia~~lGl~ 121 (472)
...+++.++++||+|+|++. +.+ ++++|+..+... ...++..++..+|+
T Consensus 83 ~~~~~l~aa~~AledAg~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~- 160 (418)
T PRK07910 83 LQRMSTVLGRRVWENAGSPEVDTNRL-MVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA- 160 (418)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccE-EEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC-
Confidence 45588899999999999743 222 467776543210 01245678888998
Q ss_pred CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCC
Q psy1213 122 DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDF 201 (472)
Q Consensus 122 ~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (472)
.+|.++++++|+|++.||.+|++.|++|++|.+||+|+|.... |... ..|. .
T Consensus 161 -~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~-~~~~-----~~f~----------------~----- 212 (418)
T PRK07910 161 -KAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIE-AVPI-----AGFA----------------Q----- 212 (418)
T ss_pred -CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHH-----HHHH----------------h-----
Confidence 6899999999999999999999999999999999999987432 1100 0000 0
Q ss_pred CCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC--CCccceeccceeeccCCCccCC
Q psy1213 202 FIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT--DILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~--~~~P~a~~~~~~~~de~~~~~t 279 (472)
.|.. +. +..|... .+||+.+
T Consensus 213 ---------------------------~~~~-----------------------ls~~~~~~~~~-~rPFd~~------- 234 (418)
T PRK07910 213 ---------------------------MRIV-----------------------MSTNNDDPAGA-CRPFDKD------- 234 (418)
T ss_pred ---------------------------cCCc-----------------------cccCCCCCCCC-cCCCcCC-------
Confidence 0000 00 0001111 1344322
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATPQ 355 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~~ 355 (472)
.+|.+ ++||++++||++++.|+++|.+++++|+|++..++... .....+...++++
T Consensus 235 -------------~~G~v-------~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~ 294 (418)
T PRK07910 235 -------------RDGFV-------FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTR 294 (418)
T ss_pred -------------CCCEe-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHH
Confidence 34666 89999999999999999999999999999998765211 1123345789999
Q ss_pred HHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 356 VLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 356 Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
||+++|++++|||++|.|++++.. +..+++++... |.+ ...| |+ .-+..+||+.+|+|+.+++.
T Consensus 295 Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~-fg~---------~~~~---v~--s~K~~~GH~~~AaG~~~li~ 359 (418)
T PRK07910 295 AIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNA-LGG---------HRPA---VY--APKSALGHSVGAVGAVESIL 359 (418)
T ss_pred HHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHH-hCC---------CCCc---ee--CccccccccHHHHHHHHHHH
Confidence 999999999999999999999953 44555555421 211 0112 43 23445899999999999999
Q ss_pred HHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 435 AANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 435 ~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++.+|+.+- .++.|+++++.||.++++||++.
T Consensus 360 ~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 360 TVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFGRY 418 (418)
T ss_pred HHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEecC
Confidence 999998641 14678889999999999999873
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-24 Score=220.27 Aligned_cols=271 Identities=20% Similarity=0.208 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHHcCCCc-CccC----EEEEEeecCCC-----------------C---------CChHHHHHHHHcC
Q psy1213 71 AHELARHSLIGILQKTGISK-DLID----YIVYGTVIQEV-----------------K---------TSNIGREAALSAG 119 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~-~~Id----~vi~g~~~~~~-----------------~---------~~~~a~~ia~~lG 119 (472)
...|++.|+++||+|+|+.. ..++ ++++|+..+.. . ...++.+++..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 45688999999999999843 2222 67787644321 0 0125678899999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ ++|.++++++|+|++.||..|+++|++|++|++||+|+|.++..... .|. .
T Consensus 153 ~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~-------~f~----------------~--- 204 (405)
T PRK09116 153 L--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAA-------VFD----------------T--- 204 (405)
T ss_pred C--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHH-------HHH----------------H---
Confidence 9 69999999999999999999999999999999999999974321100 000 0
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t 279 (472)
+.. .+ .. ...|.. ..+||+.+
T Consensus 205 ------------------l~~----------~~-----------~~------------~~~~~~-~~rPfd~~------- 225 (405)
T PRK09116 205 ------------------LFA----------TS-----------TR------------NDAPEL-TPRPFDAN------- 225 (405)
T ss_pred ------------------hhh----------hc-----------cC------------CCCCCC-CCCCCcCC-------
Confidence 000 00 00 001111 11344322
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccc--ccccHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ--LLLGPAYATPQVL 357 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~--~~~~~~~a~~~Al 357 (472)
++|.+ ++|||+++||++++.|+++|.+++++|.|++...+..... ...+...+++++|
T Consensus 226 -------------~~G~v-------~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL 285 (405)
T PRK09116 226 -------------RDGLV-------IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELAL 285 (405)
T ss_pred -------------CCCEe-------eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHH
Confidence 34666 8999999999999999999999999999999876532110 1223468999999
Q ss_pred HHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
+++|++++|||+|+.|++.+.. +..+.+++... |. .++| |+... -.+||+.+|+|+.+++.++
T Consensus 286 ~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~-fg----------~~~p---v~s~K--~~~GH~~~AaG~~~~~~~~ 349 (405)
T PRK09116 286 KDAGLAPEDIGYVNAHGTATDRGDIAESQATAAV-FG----------ARMP---ISSLK--SYFGHTLGACGALEAWMSI 349 (405)
T ss_pred HHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHH-hC----------CCCe---eECcc--hhhcccHHHHHHHHHHHHH
Confidence 9999999999999999999942 34444444311 21 1244 54333 3489999999999999999
Q ss_pred HHHhhcc----------------------------CCcchhhhhccCcceeEEEEE
Q psy1213 437 NRLVRED----------------------------GQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 437 ~qL~~~~----------------------------g~~gl~~~~~~GG~~~a~~l~ 464 (472)
.+|+.+- .++.|+++++.||.++++||+
T Consensus 350 ~~l~~~~ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 350 EMMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred HHHHcCccCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 9998641 145678889999999999984
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-24 Score=217.92 Aligned_cols=269 Identities=18% Similarity=0.166 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC--------------------------CChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK--------------------------TSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~--------------------------~~~~a~~ia~~lGl 120 (472)
...|++.++++||+|+|++++.++ +|++|+..+... ....+.+++..+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 467889999999999999876654 577776543210 01245678999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
++|+++++++|+|++.||..|+++|++|+ |.+||+|+|.... |.... .+. .
T Consensus 151 --~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~-p~~~~-----~~~----------------~---- 201 (399)
T cd00832 151 --RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALC-PWGWV-----AQL----------------S---- 201 (399)
T ss_pred --CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccC-HHHHH-----HHH----------------h----
Confidence 69999999999999999999999999999 9999999987322 11000 000 0
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCccCC
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~~t 279 (472)
.+.+.. ..|.. ..+||+.+
T Consensus 202 ----------------------------------------------------~~~ls~~~~p~~-~~rPFd~~------- 221 (399)
T cd00832 202 ----------------------------------------------------SGRLSTSDDPAR-AYLPFDAA------- 221 (399)
T ss_pred ----------------------------------------------------ccccCCCCCCCC-CcCCCcCC-------
Confidence 000000 01110 11344322
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc-cccccHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD-QLLLGPAYATPQVLE 358 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~-~~~~~~~~a~~~Al~ 358 (472)
.+|.+ ++||++++||++++.|+++|.+++++|.|++...+.... ....+..+++++||+
T Consensus 222 -------------~~G~~-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~ 281 (399)
T cd00832 222 -------------AAGYV-------PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALA 281 (399)
T ss_pred -------------CCCEe-------eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHH
Confidence 34666 899999999999999999999999999999997652211 123345789999999
Q ss_pred HcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~ 437 (472)
++|++++|||+++.|.+.+.. ...+.+++... |.+ ..+| |+...+ .+||+.+|+|+.+++.+++
T Consensus 282 ~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~-fg~---------~~~p---v~s~K~--~~Gh~~~aaG~~~l~~~~l 346 (399)
T cd00832 282 DAGLTPEDVDVVFADAAGVPELDRAEAAALAAV-FGP---------RGVP---VTAPKT--MTGRLYAGGAPLDVATALL 346 (399)
T ss_pred HcCCCHHHccEEEeccCcCCCCCHHHHHHHHHH-hCC---------CCCc---eeCCCc--hhcchHHHHHHHHHHHHHH
Confidence 999999999999999999853 44444444311 211 1134 554433 3799999999999999999
Q ss_pred HHhhcc---------------------------CCcchhhhhccCcceeEEEE
Q psy1213 438 RLVRED---------------------------GQFGLIAACAAGGQGVGMII 463 (472)
Q Consensus 438 qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l 463 (472)
+|+.+- .++.|+++++.||.++++||
T Consensus 347 ~l~~~~ipp~~n~~~~~p~~~l~~v~~~~~~~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 347 ALRDGVIPPTVNVTDVPPAYGLDLVTGRPRPAALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred HHhCCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeccCCCCcceEEEC
Confidence 998641 25678889999999999986
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-23 Score=215.97 Aligned_cols=272 Identities=21% Similarity=0.214 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lGl 120 (472)
..+|++.|+++||+|+|+++++++ ++++|+..... ....++..++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 468999999999999999988776 35555432110 011467789999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
.++.+++.++|+|+++||..|+++|++|++|++||+|+|.... |... ..|. .
T Consensus 152 --~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~-~~~~-----~~f~----------------~---- 203 (406)
T PRK08439 152 --KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAIC-PVGI-----GGFA----------------A---- 203 (406)
T ss_pred --CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccC-HHHH-----HHHH----------------H----
Confidence 5899999999999999999999999999999999999997321 1100 0000 0
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC--CccceeccceeeccCCCccC
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD--ILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~--~~P~a~~~~~~~~de~~~~~ 278 (472)
.+.+.. ..|.. ..+||+.+
T Consensus 204 ----------------------------------------------------~~~ls~~~~~p~~-~~rpfd~~------ 224 (406)
T PRK08439 204 ----------------------------------------------------MKALSTRNDDPKK-ASRPFDKD------ 224 (406)
T ss_pred ----------------------------------------------------hCccccCCCCCcc-CcCCccCC------
Confidence 000000 01111 11334322
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--cccccHHHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--QLLLGPAYATPQV 356 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~~~~~~~~a~~~A 356 (472)
++|.+ ++||++++||++.+.|+++|.+++++|.|++...+.... +...+..+++++|
T Consensus 225 --------------~~G~v-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~a 283 (406)
T PRK08439 225 --------------RDGFV-------MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAA 283 (406)
T ss_pred --------------CCcEE-------eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHH
Confidence 34555 899999999999999999999999999999886542111 0123446899999
Q ss_pred HHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc-ccCCCCCcHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS-IGHPFAATGVRLTVH 434 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a-~Ghp~gasG~~~v~e 434 (472)
|+++|+ +|||++|.|.+.+.. +..+.+++... |.+. ....| |+ ..++ +||+.+|+|+.+++.
T Consensus 284 l~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~~~-f~~~-------~~~~~---v~---s~K~~~Gh~~~AsG~~~~~~ 347 (406)
T PRK08439 284 LEMAGN--PKIDYINAHGTSTPYNDKNETAALKEL-FGSK-------EKVPP---VS---STKGQIGHCLGAAGAIEAVI 347 (406)
T ss_pred HHHcCC--CccCEEEccCCcCCCCCHHHHHHHHHH-hccc-------CCCCe---EE---CcccccccCchhhhHHHHHH
Confidence 999999 899999999999853 44444444321 2110 01112 43 3343 899999999999999
Q ss_pred HHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 435 AANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 435 ~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++++|+.+- .++.|+++++.||.++++||++.
T Consensus 348 ~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~~ 406 (406)
T PRK08439 348 SIMAMRDGILPPTINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFKKV 406 (406)
T ss_pred HHHHHhCCeeCCCCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEecC
Confidence 999998651 14667788999999999999863
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=214.84 Aligned_cols=273 Identities=19% Similarity=0.193 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC-------------C--------------CChHHHHHHHHcC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV-------------K--------------TSNIGREAALSAG 119 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~-------------~--------------~~~~a~~ia~~lG 119 (472)
..++++.|+++||+|+|+++++++ ++++|+..+.. . ...++.+++..+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 567889999999999999765443 56777643221 0 0135678999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|..+.... ..|. .
T Consensus 151 l--~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~-------~~f~----------------~--- 202 (406)
T PRK07967 151 I--KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMS-------CLFD----------------A--- 202 (406)
T ss_pred C--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHH-------HHHH----------------H---
Confidence 9 6999999999999999999999999999999999999986432100 0000 0
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t 279 (472)
++ .+ +. +. ...|.. ..+||+.+
T Consensus 203 ------------------~~-----~l-----s~-------------------~~---~~~p~~-~~rPFd~~------- 224 (406)
T PRK07967 203 ------------------MG-----AL-----ST-------------------KY---NDTPEK-ASRAYDAN------- 224 (406)
T ss_pred ------------------hh-----hh-----cc-------------------CC---CCCCCc-CCcCCcCC-------
Confidence 00 00 00 00 001211 11344322
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--cccccHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--QLLLGPAYATPQVL 357 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~~~~~~~~a~~~Al 357 (472)
.+|.+ ++|||+++||++.+.|+++|.+++++|.|++...+.... +...+..+++++||
T Consensus 225 -------------r~G~v-------~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al 284 (406)
T PRK07967 225 -------------RDGFV-------IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMAL 284 (406)
T ss_pred -------------CCcee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
Confidence 34666 899999999999999999999999999999987653221 11334478999999
Q ss_pred HHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
+.++ + |||+|+.|.+.+.. +..+.+++... |.+ ...| |+...+ .+||.++|+|+.+++.++
T Consensus 285 ~~~~--~-~Idyi~aHgtGT~~~D~~E~~Ai~~~-fg~---------~~~~---v~s~K~--~~GH~~~AaG~~e~i~~~ 346 (406)
T PRK07967 285 ATVD--T-PIDYINTHGTSTPVGDVKELGAIREV-FGD---------KSPA---ISATKS--LTGHSLGAAGVQEAIYSL 346 (406)
T ss_pred hCCC--C-CccEEEcCCCCCCCCCHHHHHHHHHH-hCC---------CCCe---eECccc--ccccCccccchHHHHHHH
Confidence 8654 4 99999999999952 44555554421 311 0123 554433 489999999999999999
Q ss_pred HHHhhcc----------------------------CCcchhhhhccCcceeEEEEEeCC
Q psy1213 437 NRLVRED----------------------------GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 437 ~qL~~~~----------------------------g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
++|+.+- .++.|+++++.||.++++||++..
T Consensus 347 lal~~~~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~~ 405 (406)
T PRK07967 347 LMMEHGFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRYK 405 (406)
T ss_pred HHHhcCcCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEecC
Confidence 9998641 145677889999999999999863
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=218.72 Aligned_cols=272 Identities=19% Similarity=0.181 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCE----EEEEeecCCC-------------------CCChHHHHHHHHcCCCCCCcee
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDY----IVYGTVIQEV-------------------KTSNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~----vi~g~~~~~~-------------------~~~~~a~~ia~~lGl~~~~~~~ 127 (472)
..+|+++|+++||+|+|+++++++. +++|+..+++ .....+..++..+|+ .++.+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl--~g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL--RGPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC--CCCce
Confidence 5789999999999999999888774 7777654321 013356789999999 57999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+++++|+|++.||..|+++|++|.+|++||+|+|.+.. +.. . ..+. .
T Consensus 165 ~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~~----~-~~~~----------------~----------- 211 (421)
T cd00833 165 TVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILS-PDM----F-VGFS----------------K----------- 211 (421)
T ss_pred eeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCC-HHH----H-HHHh----------------h-----------
Confidence 99999999999999999999999999999999997532 100 0 0000 0
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCC
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLK 287 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~ 287 (472)
.+.+ .|... .+|++.+
T Consensus 212 ---------------------------------------------~~~l---~~~~~-~~pf~~~--------------- 227 (421)
T cd00833 212 ---------------------------------------------AGML---SPDGR-CRPFDAD--------------- 227 (421)
T ss_pred ---------------------------------------------CCCC---CCCCC-CCCCCCC---------------
Confidence 0000 00000 0122111
Q ss_pred CcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHHHHHHHcCCC
Q psy1213 288 PAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATPQVLERAGLS 363 (472)
Q Consensus 288 p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~Al~~Agl~ 363 (472)
.++..++|||+++||++++.|++++.+++++|.|++...+.... ....+...++++||++||++
T Consensus 228 ------------~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~ 295 (421)
T cd00833 228 ------------ADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVD 295 (421)
T ss_pred ------------CCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCC
Confidence 12333899999999999999999998899999999886542111 01233478999999999999
Q ss_pred cCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc
Q psy1213 364 LSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE 442 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~ 442 (472)
++|||++|+|++++.. +..+++++... |.+.+. ....+| +.... ..+||+.+|+|+.+++.++.+|+.+
T Consensus 296 ~~did~i~~hgtgt~~~D~~E~~al~~~-f~~~~~----~~~~~~---v~s~k--~~~Gh~~~aag~~~l~~~~~~l~~~ 365 (421)
T cd00833 296 PSDIDYVEAHGTGTPLGDPIEVEALAKV-FGGSRS----ADQPLL---IGSVK--SNIGHLEAAAGLAGLIKVVLALEHG 365 (421)
T ss_pred HHHCcEEEeeCCCCCCCCHHHHHHHHHH-HhccCC----CCCcee---eecCc--CccccchhhhHHHHHHHHHHHHhcC
Confidence 9999999999999864 46666666521 222110 001123 33332 3389999999999999999999864
Q ss_pred c-----------------------------------CCcchhhhhccCcceeEEEE
Q psy1213 443 D-----------------------------------GQFGLIAACAAGGQGVGMII 463 (472)
Q Consensus 443 ~-----------------------------------g~~gl~~~~~~GG~~~a~~l 463 (472)
. .++.++++++.||.++++||
T Consensus 366 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 366 VIPPNLHFETPNPKIDFEESPLRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred CcCCcCCCCCCCCCCCcccCCeEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 1 13456677788999998875
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=204.48 Aligned_cols=285 Identities=16% Similarity=0.070 Sum_probs=198.2
Q ss_pred ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcC-CCcCccCEEEEEee-----cCCCCCChHHHHHHHHcCCC
Q psy1213 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTG-ISKDLIDYIVYGTV-----IQEVKTSNIGREAALSAGFS 121 (472)
Q Consensus 48 ~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~ag-i~~~~Id~vi~g~~-----~~~~~~~~~a~~ia~~lGl~ 121 (472)
+.||++ +|.+..+.. ..+.+..+|+.+|++++|++++ +++++|+.+++... .+....+..+..++.++|++
T Consensus 45 ~~~i~~--~~~~~~~~~-~~~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~ 121 (348)
T PRK06147 45 GEWLIG--APVPLPPPW-RGPERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLR 121 (348)
T ss_pred CCceEe--ecCcCCccc-CchHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCC
Confidence 568887 665544432 1245788999999999999999 78999998776432 11112234566788899985
Q ss_pred CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCC
Q psy1213 122 DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDF 201 (472)
Q Consensus 122 ~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (472)
...++++++++|+|+.+||..|.++|++|++|.+||+|+|.++...... .+.
T Consensus 122 ~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~------~~~---------------------- 173 (348)
T PRK06147 122 LEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLA------HYE---------------------- 173 (348)
T ss_pred CCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHH------HHH----------------------
Confidence 4578899999999999999999999999999999999999865411000 000
Q ss_pred CCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHH
Q psy1213 202 FIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPE 281 (472)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~ 281 (472)
. . + ...+.+
T Consensus 174 --------------------------------------------~-~-----~------------~l~~~~--------- 182 (348)
T PRK06147 174 --------------------------------------------A-R-----D------------RLLTSQ--------- 182 (348)
T ss_pred --------------------------------------------H-h-----h------------ccCCCC---------
Confidence 0 0 0 000000
Q ss_pred HHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCC-c----ccccccHHHHHHHH
Q psy1213 282 QMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDP-K----DQLLLGPAYATPQV 356 (472)
Q Consensus 282 ~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p-~----~~~~~~~~~a~~~A 356 (472)
.+.|.+ ++|||+++||++.+.|++++.++++ .|++...+.. . .....+..+++++|
T Consensus 183 ----------~~~G~v-------~GEGA~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~A 243 (348)
T PRK06147 183 ----------NSNGFI-------PGEAAAAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAA 243 (348)
T ss_pred ----------CCCcee-------eeceEEEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHH
Confidence 023555 8999999999999999999887766 4555433221 0 01234457999999
Q ss_pred HHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHA 435 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~ 435 (472)
|+++|++++|||+++.|.+.+.. ...+..++... |.... ...| ++... ..+||+++|+|+.+++.+
T Consensus 244 L~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~-f~~~~-------~~~~---~~~~k--~~~Gh~~aAaG~~~~~~a 310 (348)
T PRK06147 244 LAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRL-FRVRK-------EFFD---LWHPA--ECIGEIGAAIGPALLGVA 310 (348)
T ss_pred HHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHH-hhhcc-------CCCc---eecch--HhhcchHHHHHHHHHHHH
Confidence 99999999999999999998743 22222222100 11100 0123 55433 348999999999999999
Q ss_pred HHHHhhc--cCCcchhhhhccCcceeEEEEEeC
Q psy1213 436 ANRLVRE--DGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 436 v~qL~~~--~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+.+|+++ .+.+.|+.+..-.|.=.|+||++-
T Consensus 311 ~~~~~~g~~~g~~~L~~s~~d~g~r~a~~l~~~ 343 (348)
T PRK06147 311 LAASRKGYGPGPNVLCHLSDDDGARAALVLEYR 343 (348)
T ss_pred HHHHHcCcCCCCcEEEEecCCCCceEEEEEecc
Confidence 9999976 567899988888888788888864
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-23 Score=206.53 Aligned_cols=140 Identities=15% Similarity=0.087 Sum_probs=119.7
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
++.|.++++|+|++.++|+++....+ +.+|.. .+++.+|+... +++..+|+.+|+++||+++|+++++||.+|++
T Consensus 4 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~--~~Gi~~R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 80 (329)
T PRK07204 4 YISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLK--KSGVKTRHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIICA 80 (329)
T ss_pred CcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhh--ccCceEEeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 45799999999999999977665432 234543 67887765443 78999999999999999999999999999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCC-CCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSD-KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~-~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
+.+++...+..+..++..+|++. ..++++++.+|+|+..+|..|..+|++|.++.+||+++|..+
T Consensus 81 ~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s 146 (329)
T PRK07204 81 SGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISS 146 (329)
T ss_pred CCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEecccc
Confidence 88777666888999999999963 369999999999999999999999999999999999999854
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=204.29 Aligned_cols=140 Identities=14% Similarity=0.133 Sum_probs=122.0
Q ss_pred ceeeeeecccCCCCcccccccccC--CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTG--KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~--~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
++|.|+++|+|++.++|+.+.+.. .+.||.. +|++.+|+...+++++.+|+.+|+++||+++|+++++||.+++++
T Consensus 2 ~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~--~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s 79 (345)
T TIGR00748 2 AGIVGYGAYIPMYRIKVEEIARVWGKDPESISN--GLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGS 79 (345)
T ss_pred ccEEEEEEeCCCeeecHHHHHHHhCCCHhHeee--ccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 469999999999999998776543 2446655 788887765556899999999999999999999999999999998
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
..++...+..+..++..+|++...++++++.+|+++..+|..|..+|++|.++++||+++|.++
T Consensus 80 ~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~ 143 (345)
T TIGR00748 80 ESHPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQ 143 (345)
T ss_pred cCCCccccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecc
Confidence 8777666777889999999954678999999999999999999999999999999999999864
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-23 Score=205.26 Aligned_cols=141 Identities=18% Similarity=0.162 Sum_probs=123.8
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
+.+.|.++++|+|++.+.++.+..... +.+|.. ++++.++....++++..+|+.+|++++|+++|+++++||.+++
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~--~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~ 79 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVT--RTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIV 79 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhh--hcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 567899999999999999877776543 445655 7999887666678999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
++..++...+..+..++..+|++ ..++++++.+|+|++.+|..|.++|++|.++++||+|+|+++
T Consensus 80 ~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s 144 (319)
T PRK09352 80 ATTTPDYAFPSTACLVQARLGAK-NAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLS 144 (319)
T ss_pred EcCCCCCCCchHHHHHHHHhCCC-CCcEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhc
Confidence 98877665667788999999995 679999999999999999999999999999999999999865
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=202.39 Aligned_cols=285 Identities=18% Similarity=0.137 Sum_probs=205.5
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
+.|.++++|+|++.+.++.+..... +.+|.. ++++.+++...+++++.+|+.+|+++||+++|+++++||.+++++
T Consensus 3 ~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~--~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~ 80 (318)
T TIGR00747 3 AGILGTGSYLPEKVLTNADLEKMVDTSDEWIVT--RTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVAT 80 (318)
T ss_pred CEEEEEEEECCCceecHHHHHHhcCCchHHeec--ccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC
Confidence 5699999999999999877765432 445665 788887766667899999999999999999999999999999998
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHh
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~ 180 (472)
..++...+..+..++..+|++ +.++++++.+|+|+..+|..|.++|++|.++++||+++|.++...
T Consensus 81 ~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~------------- 146 (318)
T TIGR00747 81 TTPDHAFPSAACMVQAYLGIK-GIPAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL------------- 146 (318)
T ss_pred CCCCCCCChHHHHHHHHhCCC-CCcEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-------------
Confidence 887765677889999999996 679999999999999999999999999999999999999864210
Q ss_pred hccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCc
Q psy1213 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDIL 260 (472)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~ 260 (472)
.
T Consensus 147 -------------------------------------------------------------------------------~ 147 (318)
T TIGR00747 147 -------------------------------------------------------------------------------D 147 (318)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc-
Q psy1213 261 PIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ- 339 (472)
Q Consensus 261 P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~- 339 (472)
|. + + ..+...+|||+|+||.+.+... .|.......+
T Consensus 148 ~~---------~--------------------~------~~~~~~GDGAaA~lL~~~~~~~--------~i~~~~~~~~~ 184 (318)
T TIGR00747 148 WT---------D--------------------R------GTCVLFGDGAGAVVLGESEDPG--------GIISTHLGADG 184 (318)
T ss_pred cC---------C--------------------C------CeEEEEecceeEEEEeecCCCC--------cEEEEEEEEcC
Confidence 00 0 0 0011269999999998754211 1111111000
Q ss_pred -------CC-------ccc---------cc----ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhh
Q psy1213 340 -------DP-------KDQ---------LL----LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWF 392 (472)
Q Consensus 340 -------~p-------~~~---------~~----~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~ 392 (472)
-| ... .. .....+++.+|+++|++++|||++-.|...........+.||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lg---- 260 (318)
T TIGR00747 185 TQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWFVPHQANLRIIEALAKRLE---- 260 (318)
T ss_pred CCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcC----
Confidence 00 000 00 011356788999999999999999999999877777788898
Q ss_pred hhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 393 AKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 393 ~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
+|.+++..+ +--+||...|+-...+.++...=+-+.|++.+..+.+.|..-.+++|+
T Consensus 261 -------------i~~~k~~~~--~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 261 -------------LDMSQVVKT--VHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred -------------CCHHHeeeh--HhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEE
Confidence 565544422 223799888887777777654311235677776554444444566664
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.6e-22 Score=201.94 Aligned_cols=240 Identities=17% Similarity=0.098 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC--------------------------------------CC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK--------------------------------------TS 108 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~--------------------------------------~~ 108 (472)
...|++.|+++||+|+|++..+.+ ++++|+..+... ..
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 567899999999999999654322 467776543210 01
Q ss_pred hHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCch
Q psy1213 109 NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPA 188 (472)
Q Consensus 109 ~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 188 (472)
.++.+++..+|+ ++|++++.++|+|++.||.+|+++|++|++|++||+|+|.... |... ..|.
T Consensus 153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~-~~~~-----~~~~--------- 215 (398)
T PRK06519 153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAER-PDML-----LLYE--------- 215 (398)
T ss_pred HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHH-----HHHH---------
Confidence 246778999999 6899999999999999999999999999999999999986422 1100 0000
Q ss_pred hhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC--CCccceecc
Q psy1213 189 DRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT--DILPIQVGD 266 (472)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~--~~~P~a~~~ 266 (472)
. .+.+. ...|+
T Consensus 216 -------~--------------------------------------------------------~~~ls~~~~~p~---- 228 (398)
T PRK06519 216 -------L--------------------------------------------------------GGLLLKGGWAPV---- 228 (398)
T ss_pred -------H--------------------------------------------------------cCccCCCCCCch----
Confidence 0 00000 00111
Q ss_pred ceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccccc
Q psy1213 267 KTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLL 346 (472)
Q Consensus 267 ~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~ 346 (472)
++. +| ..++|.+ ++|||+++||++++.|+++|.+++++|.|++... .+. ..
T Consensus 229 --~d~---------------~~--~~r~G~v-------~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~-~~~--~~ 279 (398)
T PRK06519 229 --WSR---------------GG--EDGGGFI-------LGSGGAFLVLESREHAEARGARPYARISGVESDR-ARR--AP 279 (398)
T ss_pred --hcc---------------Cc--cCCCCee-------eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecC-CCC--Ch
Confidence 000 00 0134666 8999999999999999999999999999996432 222 12
Q ss_pred ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCC
Q psy1213 347 LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFA 425 (472)
Q Consensus 347 ~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~g 425 (472)
.+..+++++||++||+ ++|||+|+.|.+.|.. +..+.+++... | + .| |+...+ .+||.++
T Consensus 280 ~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~-f-----------~-~p---vsS~Ks--~~GH~l~ 340 (398)
T PRK06519 280 GDLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAA-L-----------A-GP---VRGIGT--LFGHTME 340 (398)
T ss_pred HHHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHH-c-----------C-CC---ccccch--hhccchH
Confidence 3457899999999999 8999999999999853 44445444310 1 1 34 665554 4899999
Q ss_pred CcHHHHHHHHHHHHhhc
Q psy1213 426 ATGVRLTVHAANRLVRE 442 (472)
Q Consensus 426 asG~~~v~e~v~qL~~~ 442 (472)
|+|+.+++.++++|+..
T Consensus 341 AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 341 AQFPLGLALAALSVSKG 357 (398)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999999975
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=204.64 Aligned_cols=140 Identities=20% Similarity=0.214 Sum_probs=121.2
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
+..|.++++|+|++.++++++.+... +.+|.. ++++.+|+...++++..+|+.+|+++||+++|+++++||.++++
T Consensus 4 ~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~--~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~ 81 (325)
T PRK12879 4 YARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQ--RTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVA 81 (325)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhh--ccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 46799999999999999987765432 233433 57777766555678999999999999999999999999999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
+..++...+..+..++..+|++ ..++++++.+|+|+..||..|.++|++|.++++||+++|.++
T Consensus 82 ~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s 145 (325)
T PRK12879 82 TTTPDYLFPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLS 145 (325)
T ss_pred cCCCCCCCChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhc
Confidence 8887777788899999999996 589999999999999999999999999999999999999865
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-22 Score=205.31 Aligned_cols=145 Identities=17% Similarity=0.165 Sum_probs=125.2
Q ss_pred Cccc-ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCcc
Q psy1213 17 PQTI-TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLI 93 (472)
Q Consensus 17 ~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~I 93 (472)
|..+ .+..|.|+|.|+|++.++|+.+.+... +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++|
T Consensus 41 ~~~~~~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~--~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dI 118 (379)
T PLN02326 41 PRRVGSGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIAT--RTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDV 118 (379)
T ss_pred cccccCCcEEEEEEEECCCceecHHHHHHhcCCchhheec--ccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHC
Confidence 4444 567899999999999999987765543 556755 89999877666789999999999999999999999999
Q ss_pred CEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 94 DYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 94 d~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
|.+|+++..++... ..+..++..+|++ +.++++++.+|+|++.+|..|.++|++|.++++||+|+|.++.
T Consensus 119 d~li~~s~~~~~~~-~~a~~v~~~LG~~-~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~ 188 (379)
T PLN02326 119 DLVLLCTSSPDDLF-GSAPQVQAALGCT-NALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSR 188 (379)
T ss_pred CEEEEEeCCCCccC-cHHHHHHHHhCCC-CCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcC
Confidence 99999987766543 4677899999997 7899999999999999999999999999999999999998753
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-22 Score=201.35 Aligned_cols=139 Identities=17% Similarity=0.163 Sum_probs=122.0
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
.+|+|+++|+|++.++|+++.+... +.||.- +|++.+|+...++++..+|+.+|+++||+++|+++++||.+++++
T Consensus 3 v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~--~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s 80 (326)
T CHL00203 3 VHILSTGSSVPNFSVENQQFEDIIETSDHWIST--RTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILAT 80 (326)
T ss_pred cEEEEEEEECCCeEEcHHHHHHhcCCChhhEee--ccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 5799999999999999988776653 456764 899999877777889999999999999999999999999999998
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
+.++... ..+..++..+|++ +.++++++.+|+|++.+|..|.++|++|.++++||+|+|.+|.
T Consensus 81 ~~~~~~~-~~~~~v~~~Lg~~-~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~ 143 (326)
T CHL00203 81 STPDDLF-GSASQLQAEIGAT-RAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSK 143 (326)
T ss_pred CCCCCCC-chHHHHHHHhCCC-CCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhC
Confidence 7776433 3467789999996 6889999999999999999999999999999999999998764
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-22 Score=204.27 Aligned_cols=284 Identities=14% Similarity=0.122 Sum_probs=202.5
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
+.|.++++|+|++.++|+.+.+... +.||.. ++++.+|+...++++..+|+.+|+++||+++|+++++||.+++++
T Consensus 3 v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~--~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s 80 (347)
T PRK04262 3 VGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKR--GLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS 80 (347)
T ss_pred eeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhh--ccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 5699999999999999977765432 334543 577777665556899999999999999999999999999999998
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHh
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~ 180 (472)
..+++..+..+..++..+|++...++++++.+|++++.+|+.|..+|++|.++++||+++|.....
T Consensus 81 ~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~~-------------- 146 (347)
T PRK04262 81 ESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQGA-------------- 146 (347)
T ss_pred cCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeeccC--------------
Confidence 877766667788999999996447889999999999999999999999999999999999972100
Q ss_pred hccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCc
Q psy1213 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDIL 260 (472)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~ 260 (472)
T Consensus 147 -------------------------------------------------------------------------------- 146 (347)
T PRK04262 147 -------------------------------------------------------------------------------- 146 (347)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEE-ecc
Q psy1213 261 PIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY-VSQ 339 (472)
Q Consensus 261 P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~-~~~ 339 (472)
|. ..+ .. ..+|||+|+||...+. ..+|.+... ..+
T Consensus 147 ~~----~~~-------------------------~~-------~~GDGA~A~ll~~~~~--------~~~i~~~~~~~~d 182 (347)
T PRK04262 147 PG----DAL-------------------------EY-------TAAAGGAAFIIGKEEV--------IAEIEATYSYTTD 182 (347)
T ss_pred CC----CCC-------------------------CC-------cCCCCcEEEEEecCcc--------cceeecccccccc
Confidence 00 000 00 0488998888875321 123332211 000
Q ss_pred C-----------Ccc-c-c------cccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCC
Q psy1213 340 D-----------PKD-Q-L------LLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRS 400 (472)
Q Consensus 340 ~-----------p~~-~-~------~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~ 400 (472)
. |.. . . ......+++.+|+++|++++|||+|=+|-..........+.||
T Consensus 183 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lg------------ 250 (347)
T PRK04262 183 TPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPLRVAKMLG------------ 250 (347)
T ss_pred chhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHHHHHHHcC------------
Confidence 0 100 0 0 0112467899999999999999999999887776666788888
Q ss_pred ccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 401 SKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 401 ~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+|.+++-.+--.--+||...|+=...+.+++.++ +.|++.|..+.+.|-...+++++.
T Consensus 251 -----l~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~~--~~Gd~vll~~~G~G~~~~~~~~~~ 308 (347)
T PRK04262 251 -----FTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDVA--KPGDRILVVSFGSGAGSDAFSITV 308 (347)
T ss_pred -----CCHHHhhccchhhhhCChHHHHHHHHHHHHHHhC--CCCCEEEEEecCCCcceeeEEEEe
Confidence 4554443211123489999999888888876644 467777776554443444566654
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-22 Score=200.15 Aligned_cols=143 Identities=13% Similarity=0.068 Sum_probs=122.7
Q ss_pred ccceeeeeecccCCCCcccccccccC---------CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcC
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTG---------KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKD 91 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~---------~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~ 91 (472)
.++.|.|+++|+|++.+.++++.... .+.+|.. .+++.+|+...+++++.+|+.+|+++||+++|++++
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~ 81 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEA--LTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPS 81 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhh--hcCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence 56789999999999999987776532 1233433 577776654445789999999999999999999999
Q ss_pred ccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 92 LIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 92 ~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
+||.+++++..+++..+.++..++..+|++...++++|+.+|+|+..||..|..+|++|.++++||+++|..+.
T Consensus 82 ~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~ 155 (338)
T PRK09258 82 DIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESARE 155 (338)
T ss_pred HCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccch
Confidence 99999999988777778899999999999755899999999999999999999999999999999999998754
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-22 Score=199.33 Aligned_cols=139 Identities=13% Similarity=0.042 Sum_probs=121.5
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
+..|.++++|+|++.++|+.+..... +.+|.. ++++..|+...+++++.+|+.+|+++||+++|+++++||.||++
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~--~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ 80 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLGLETGWIER--RTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLA 80 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhh--ccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 56799999999999999987765542 334543 78888766555688999999999999999999999999999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
++++++..|..+.+++..||++ +.++++++.+|+++++||..|..+|+++. +.+||+++|..+
T Consensus 81 t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s 143 (326)
T PRK05963 81 TSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANILS 143 (326)
T ss_pred CCCCCCCCCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhh
Confidence 9998877888999999999997 68999999999999999999999999985 999999998754
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.3e-22 Score=235.92 Aligned_cols=272 Identities=17% Similarity=0.169 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC-------------------------------------------
Q psy1213 73 ELARHSLIGILQKTGISKDLID----YIVYGTVIQEV------------------------------------------- 105 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~------------------------------------------- 105 (472)
.|+++++++||+|+|+..+ .+ +|++|...+..
T Consensus 95 rl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (2582)
T TIGR02813 95 LLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWE 173 (2582)
T ss_pred HHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhcccccccC
Confidence 4789999999999998543 33 57777543210
Q ss_pred -------CCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHH
Q psy1213 106 -------KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLL 178 (472)
Q Consensus 106 -------~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~ 178 (472)
....++.+|+..+|+ ++|+++|+++|+|++.||++|++.|++|++|.+||+|++.... |+.. ..|
T Consensus 174 ~~~~~g~~~n~~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~-p~~~-----~~f 245 (2582)
T TIGR02813 174 ENSFPGSLGNVISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNS-PFMY-----MSF 245 (2582)
T ss_pred ccccccccccHHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCC-HHHH-----HHH
Confidence 001357789999999 6999999999999999999999999999999999999986421 1100 000
Q ss_pred HhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC
Q psy1213 179 LRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD 258 (472)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~ 258 (472)
. . .+.+
T Consensus 246 s----------------~--------------------------------------------------------~~~l-- 251 (2582)
T TIGR02813 246 S----------------K--------------------------------------------------------TPAF-- 251 (2582)
T ss_pred H----------------h--------------------------------------------------------ccCc--
Confidence 0 0 0000
Q ss_pred CccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEec
Q psy1213 259 ILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS 338 (472)
Q Consensus 259 ~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~ 338 (472)
.|.. ..++|+.+ .+|.+ ++||++++||.+.+.|+++|+++|++|+|++...
T Consensus 252 -S~~g-~crpFD~~--------------------adG~v-------~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~ 302 (2582)
T TIGR02813 252 -TTNE-DIQPFDID--------------------SKGMM-------IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASS 302 (2582)
T ss_pred -CCCC-CccCCCCC--------------------CCccc-------ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcC
Confidence 0100 01344322 34666 8999999999999999999999999999999977
Q ss_pred cCCcc----cccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCC
Q psy1213 339 QDPKD----QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNN 413 (472)
Q Consensus 339 ~~p~~----~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~ 413 (472)
+.... +...+..+++++||++||++|+||||||.|.+.|.. +.+++++|... |.+... ... + +.
T Consensus 303 DG~~~~itaP~~~gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~v-f~~~~~----~~~--~---~~- 371 (2582)
T TIGR02813 303 DGKFKSIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSV-FSQDND----QKQ--H---IA- 371 (2582)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHH-hccccc----CCC--C---ce-
Confidence 63211 112234789999999999999999999999999953 55555555421 322110 001 1 22
Q ss_pred CCCCc-cccCCCCCcHHHHHHHHHHHHhhcc-------------------------------------CCcchhhhhccC
Q psy1213 414 WGGSL-SIGHPFAATGVRLTVHAANRLVRED-------------------------------------GQFGLIAACAAG 455 (472)
Q Consensus 414 ~GG~~-a~Ghp~gasG~~~v~e~v~qL~~~~-------------------------------------g~~gl~~~~~~G 455 (472)
-|..+ .+||..+|+|+..++.++++|+++- .++.++++++.|
T Consensus 372 vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfG 451 (2582)
T TIGR02813 372 LGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFG 451 (2582)
T ss_pred eeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCC
Confidence 22333 4899999999999999999997640 146778889999
Q ss_pred cceeEEEEEeCC
Q psy1213 456 GQGVGMIIERHP 467 (472)
Q Consensus 456 G~~~a~~l~~~~ 467 (472)
|.|+++||+..+
T Consensus 452 GtN~hvvlee~~ 463 (2582)
T TIGR02813 452 GTNFHMVLEEYS 463 (2582)
T ss_pred CeeEEEEEeecC
Confidence 999999999863
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-22 Score=200.28 Aligned_cols=140 Identities=21% Similarity=0.182 Sum_probs=120.9
Q ss_pred cceeeeeecccCCCCcccccccccC--CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTG--KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
|+.|.++++|+|++.++++.+.+.. ...+|.. ++++.+|+...+++++.+|+.+|+++||+++|+++++||.++++
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~--~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~ 78 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRT--RTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVA 78 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhh--ccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 5679999999999999987766543 2233433 67777766555678999999999999999999999999999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
+..++...+..+..++..+|++ ..++++++.+|+|+..+|..|.++|++|.++++||+++|.++
T Consensus 79 ~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s 142 (320)
T cd00830 79 TSTPDYLFPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLS 142 (320)
T ss_pred cCCCCCCCCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhc
Confidence 8887765678899999999997 789999999999999999999999999999999999999865
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.7e-22 Score=202.95 Aligned_cols=140 Identities=15% Similarity=0.089 Sum_probs=113.1
Q ss_pred ccceeeeeecccCCCCcccccccccC--------------------------CceEEEecccccccccCccCC-------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTG--------------------------KNIVFVDGVRTPFLLSGTDYA------- 67 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~--------------------------~~~~Ivg~~~t~~~~~~~~~~------- 67 (472)
+|+.|.|+++|+|++.++|+.+.... ...||.. +|++..|+....
T Consensus 1 ~~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~~~~~~~~~~~~ 78 (372)
T PRK07515 1 HNVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEK--ASGIKSRYVMDKEGILDPD 78 (372)
T ss_pred CCcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhh--ccCCceEEEecccccCccc
Confidence 35679999999999999997774331 1224433 566655543211
Q ss_pred -----------C--CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCc
Q psy1213 68 -----------N--MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACI 134 (472)
Q Consensus 68 -----------~--~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Ca 134 (472)
+ .+..+|+.+|+++||+++|+++++||.+++++..+++..+..+..++..+|++ +++++++.+|+
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~aCa 156 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNVACS 156 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecchhH
Confidence 1 13468999999999999999999999999998777666677888999999993 78999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 135 SSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 135 sg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
|++.+|..|.++|++|.++++||+|+|.++
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s 186 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICS 186 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeeccc
Confidence 999999999999999999999999999865
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.2e-21 Score=192.15 Aligned_cols=146 Identities=16% Similarity=0.099 Sum_probs=124.0
Q ss_pred cccccceeeeeecccCCCCccccc-ccccCC-ceEEEe--cccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCcc
Q psy1213 18 QTITNMSLKSICTSHNVYSPRKSV-KDKTGK-NIVFVD--GVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLI 93 (472)
Q Consensus 18 ~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~-~~~Ivg--~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~I 93 (472)
-++++..|.|+++|+|++.+++++ +.+... +.++.. .-.|++.+|+....+++..+|+.+|+++||+++|+++++|
T Consensus 3 ~~~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dI 82 (353)
T PRK12880 3 TRFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSL 82 (353)
T ss_pred ccccccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHC
Confidence 356888999999999999999874 343322 222111 0148888877655688999999999999999999999999
Q ss_pred CEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 94 DYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 94 d~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
|.+|+++.++++..|.++..++.+||+++++++++++.+|++++++|..|..+|++|..+ +||+++|..|
T Consensus 83 d~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S 152 (353)
T PRK12880 83 DALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLS 152 (353)
T ss_pred CEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhh
Confidence 999999999999899999999999999757889999999999999999999999999999 9999998754
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-21 Score=196.18 Aligned_cols=141 Identities=12% Similarity=0.055 Sum_probs=118.0
Q ss_pred cceeeeeecccCCCCcccccccccCCc---------eEEEecccccccccCccCC-----CCCHHHHHHHHHHHHHHHcC
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGKN---------IVFVDGVRTPFLLSGTDYA-----NMMAHELARHSLIGILQKTG 87 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~~---------~~Ivg~~~t~~~~~~~~~~-----~~~~~~La~~A~~~Al~~ag 87 (472)
++.|.|+++|+|++.++|+.+.+.... .||.. +|++.+|+...+ +.+..+|+.+|+++||+++|
T Consensus 2 ~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~ag 79 (378)
T PRK06816 2 NVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILR--NNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAG 79 (378)
T ss_pred CeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHH--hCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcC
Confidence 457999999999999999877544321 23433 577777654322 25789999999999999999
Q ss_pred CCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 88 ISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 88 i~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
+++++||.+|+++..+++..+..+..++..+|++ ..++++++.+|+|++.+|..|..+|++|.++++||+|+|.+|.
T Consensus 80 i~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~ 156 (378)
T PRK06816 80 FSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASR 156 (378)
T ss_pred CCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchh
Confidence 9999999999999887765566677899999996 6799999999999999999999999999999999999999875
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.6e-21 Score=192.77 Aligned_cols=140 Identities=11% Similarity=0.057 Sum_probs=116.8
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
++.|.++++|+|++.++++.+..... +.+|.. ++++.+|+...++++..+|+.+|++++|+++|+++++||.+++.
T Consensus 4 ~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~--~~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 81 (339)
T PRK06840 4 NVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIE--KFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYI 81 (339)
T ss_pred ceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhh--hcCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 57899999999999999987654322 223332 67787766555678999999999999999999999999999865
Q ss_pred e-ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHc-CCCCEEEEEeecccC
Q psy1213 100 T-VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAA-GAYDVVVAGGVEFMS 164 (472)
Q Consensus 100 ~-~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~s-G~~d~vLv~G~e~~s 164 (472)
+ ..+++..+..+..++..+|++ ..++++++.+|+++..+|..|.++|++ |.++.+||++.|..+
T Consensus 82 ~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s 147 (339)
T PRK06840 82 GSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNS 147 (339)
T ss_pred ccCCCCCCCCchHHHHHHHhCCC-CcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeecccc
Confidence 4 445555667788999999996 689999999999999999999999999 999999999998754
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-20 Score=191.17 Aligned_cols=223 Identities=22% Similarity=0.235 Sum_probs=156.5
Q ss_pred hHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCch
Q psy1213 109 NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPA 188 (472)
Q Consensus 109 ~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 188 (472)
.++..++..+|+ ++|.++++++|+|++.||.+|+++|++|++|++||+|+|..+.... ..+.
T Consensus 138 ~~a~~ia~~lgl--~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~-------~~~~--------- 199 (392)
T PRK09185 138 SLADFLRAYLGL--SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTL-------NGFN--------- 199 (392)
T ss_pred HHHHHHHHHhCC--CCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHH-------HHHH---------
Confidence 467789999999 5799999999999999999999999999999999999986432100 0000
Q ss_pred hhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccce
Q psy1213 189 DRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKT 268 (472)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~ 268 (472)
. + +. .... ..+|
T Consensus 200 -------~---------------------~-----------------------------------~~----l~~~-~~~P 211 (392)
T PRK09185 200 -------S---------------------L-----------------------------------ES----LSPQ-PCRP 211 (392)
T ss_pred -------h---------------------c-----------------------------------cc----cCCC-ccCC
Confidence 0 0 00 0000 0022
Q ss_pred eeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----c
Q psy1213 269 ISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----Q 344 (472)
Q Consensus 269 ~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~ 344 (472)
++.+ ..|.+ ++||++++||++++ ...++|.|++...+.... .
T Consensus 212 fd~~--------------------~~G~~-------~gEGaa~vVLe~~~-------~~~~~I~g~g~~~d~~~~~~~~~ 257 (392)
T PRK09185 212 FSAN--------------------RDGIN-------IGEAAAFFLLERED-------DAAVALLGVGESSDAHHMSAPHP 257 (392)
T ss_pred CcCC--------------------CCccc-------eeceEEEEEEEEcC-------CCcEEEEEEEEeCCCCCCCCCCC
Confidence 2211 12333 79999999999871 233689999987552211 1
Q ss_pred ccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCC
Q psy1213 345 LLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHP 423 (472)
Q Consensus 345 ~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp 423 (472)
...+..+++++||++||++++|||++++|++++.. +..+..++... |. ..+| |+...+. +||+
T Consensus 258 ~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~-f~----------~~~p---v~s~K~~--~Gh~ 321 (392)
T PRK09185 258 EGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAV-FG----------DGVP---CSSTKGL--TGHT 321 (392)
T ss_pred CHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHH-hC----------CCCc---eeCCCcc--cccC
Confidence 12234689999999999999999999999999962 23333333210 21 1245 6666555 6999
Q ss_pred CCCcHHHHHHHHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeCC
Q psy1213 424 FAATGVRLTVHAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 424 ~gasG~~~v~e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
.+|+|+.+++.++++|+++- .++.|+++++.||.++++||++.+
T Consensus 322 ~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~~ 392 (392)
T PRK09185 322 LGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRAD 392 (392)
T ss_pred hhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeCC
Confidence 99999999999999998641 257788899999999999999753
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-20 Score=210.26 Aligned_cols=271 Identities=22% Similarity=0.237 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCCCC-------------------hHHHHHHHHcCCCCCCceeeec
Q psy1213 74 LARHSLIGILQKTGISKDLID----YIVYGTVIQEVKTS-------------------NIGREAALSAGFSDKTPAHTVT 130 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~~~-------------------~~a~~ia~~lGl~~~~~~~~v~ 130 (472)
|.++.+++||+|||++++.+. +|++|....++... ..+.+++..+++ .+|++.|+
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~~vd 171 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSVTVD 171 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCcccc
Confidence 899999999999999999888 67888766655321 256789999999 69999999
Q ss_pred ccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCccccc
Q psy1213 131 MACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVA 210 (472)
Q Consensus 131 ~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (472)
++|+|++.|+++|++.|++|+||.+|++|+..+-....... |
T Consensus 172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~------------------------------~-------- 213 (1061)
T COG3321 172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYL------------------------------F-------- 213 (1061)
T ss_pred chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceee------------------------------e--------
Confidence 99999999999999999999999999999977532110000 0
Q ss_pred ccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcc
Q psy1213 211 EFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAF 290 (472)
Q Consensus 211 ~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~ 290 (472)
++ .|++ .|.- .+++|+.+
T Consensus 214 ---------------------~~-------------------~g~l---s~~g-~c~~fd~~------------------ 231 (1061)
T COG3321 214 ---------------------SA-------------------GGML---SPDG-RCKAFDAD------------------ 231 (1061)
T ss_pred ---------------------ec-------------------ccCc---CCCC-cceecccC------------------
Confidence 00 0000 0100 11233322
Q ss_pred cCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHHHHHHHcCCCcCC
Q psy1213 291 VKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATPQVLERAGLSLSD 366 (472)
Q Consensus 291 ~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~Al~~Agl~~~d 366 (472)
.+|.+ .++|++++||...+.|.+.|+++|+.|+|.+...+.... +...+....+++||+.+|++|++
T Consensus 232 --adG~v-------~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~t 302 (1061)
T COG3321 232 --ADGYV-------RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPAT 302 (1061)
T ss_pred --CCCEE-------EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCccc
Confidence 24666 799999999999999999999999999999987653211 11234478899999999999999
Q ss_pred cCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc-ccCCCCCcHHHHHHHHHHHHhhc--
Q psy1213 367 IDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS-IGHPFAATGVRLTVHAANRLVRE-- 442 (472)
Q Consensus 367 Id~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a-~Ghp~gasG~~~v~e~v~qL~~~-- 442 (472)
|+|+|.|.+.|.. ..+++++|+.. | ++.. .+.| ...|..++ +||+..|.|+..+++.+++|+++
T Consensus 303 v~yvEaHgTGT~lGDpiE~~aL~~v-~---~~~~----~~~~----c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~i 370 (1061)
T COG3321 303 VQYVEAHGTGTPLGDPIEANALGAV-Y---GEGA----PAQP----CAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYI 370 (1061)
T ss_pred CcEEEecCCCCCCcCHHHHHHHHHH-h---ccCC----CCCc----ccccccccccccHHHHHHHHHHHHHHHhhhcCcc
Confidence 9999999999964 56666666532 1 1111 1122 44455544 89999999999999999999875
Q ss_pred ---------------------------------cCCcchhhhhccCcceeEEEEEeCC
Q psy1213 443 ---------------------------------DGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 443 ---------------------------------~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
..+++-+.+++.||.++-+|||-.+
T Consensus 371 p~~l~~~~~np~i~~~~sp~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 371 PPTLHFDTPNPEIDFDSSPFVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred CCcCCCCCCCcCCccccCCeEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence 1246667789999999999998654
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-20 Score=187.01 Aligned_cols=140 Identities=14% Similarity=0.081 Sum_probs=118.5
Q ss_pred ceeeeeecccCCCCcccccccccCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeec
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVI 102 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~ 102 (472)
+.|.++++|+|++.+.++.+.......+|.. .+++..+.....+++..+|+.+|++++|+++|+++++||.+++++..
T Consensus 2 v~I~~i~~~lP~~~v~~~~~~~~~~~~~~~~--~~gi~~r~~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~ 79 (324)
T cd00827 2 VGIEAIGAYLPRYRVDNEELAEGLGVDPGKY--TTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATES 79 (324)
T ss_pred ccEEEEEecCCceeecHHHHHHHhCCCccee--eeecceeEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCC
Confidence 4689999999999999988876654323322 34454444333468899999999999999999999999999999887
Q ss_pred CCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 103 QEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 103 ~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
+....+..+..++..+|++ ..++++++.+|+|++.||..|.++|++|.++++||+++|.++.
T Consensus 80 ~~~~~~~~~~~i~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~ 141 (324)
T cd00827 80 PIDKGKSAATYLAELLGLT-NAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASY 141 (324)
T ss_pred CCCCCccHHHHHHHHcCCC-CCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhh
Confidence 7665678899999999997 7999999999999999999999999999999999999998754
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-19 Score=184.89 Aligned_cols=140 Identities=17% Similarity=0.109 Sum_probs=116.1
Q ss_pred ceeeeeecccCCCCcccccccccCC----c----------eEEEecccccccccCccCC--C------------------
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK----N----------IVFVDGVRTPFLLSGTDYA--N------------------ 68 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~----~----------~~Ivg~~~t~~~~~~~~~~--~------------------ 68 (472)
..|.|+++|+|++.++|+++.+... + .+|.. .+++.+|....+ +
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCA--KTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHh--hcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 3488999999999999877765432 1 34443 577777654332 2
Q ss_pred ---CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec-ccCccHHHHHHHHH
Q psy1213 69 ---MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT-MACISSNQGITTGI 144 (472)
Q Consensus 69 ---~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~Casg~~al~~A~ 144 (472)
++..+|+.+|+++||+++|+++++||.+|+++.++ +..|.++..++..+|++..+++++++ .+|++++.||..|.
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHH
Confidence 15799999999999999999999999999998765 55788999999999997458899998 89999999999999
Q ss_pred HHHHcCCCCEEEEEeecccCC
Q psy1213 145 GLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 145 ~~I~sG~~d~vLv~G~e~~s~ 165 (472)
.+|++|..+.+||+++|..|.
T Consensus 159 ~~~~~~~~~~aLvv~~e~~s~ 179 (361)
T cd00831 159 DLLEANPGARVLVVSTELCSL 179 (361)
T ss_pred HHHHHCCCCEEEEEEeecccc
Confidence 999999999999999998654
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-19 Score=182.13 Aligned_cols=141 Identities=10% Similarity=-0.031 Sum_probs=118.2
Q ss_pred cceeeeeecccCCCCcccccccccC-----Cce---------EEEecccccccccCccCCC-------------------
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTG-----KNI---------VFVDGVRTPFLLSGTDYAN------------------- 68 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~-----~~~---------~Ivg~~~t~~~~~~~~~~~------------------- 68 (472)
...|.|+++|+|++.++|+++.+.. .+. +|.. +|++.+|+...++
T Consensus 22 ~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (399)
T PLN03171 22 LAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQ--ELGVQKRYLHHTEELLSAHPEFLDHDAPSLDA 99 (399)
T ss_pred CcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHH--hcCCCceeEeccccccccCccccccCCCCHHH
Confidence 3569999999999999998766541 122 3554 7888887654444
Q ss_pred ------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-ceeeecccCccHHHHHH
Q psy1213 69 ------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-PAHTVTMACISSNQGIT 141 (472)
Q Consensus 69 ------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~Casg~~al~ 141 (472)
++..+|+.+|+++||+++|+++++||.||+++.++++ .|.++..++..||++... ..+.+..+|++++++|.
T Consensus 100 r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~ 178 (399)
T PLN03171 100 RLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALR 178 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHH
Confidence 3789999999999999999999999999999999886 689999999999996332 25677779999999999
Q ss_pred HHHHHHHcCCCCEEEEEeecccCC
Q psy1213 142 TGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 142 ~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
.|.++|++|.++.|||+++|..|.
T Consensus 179 ~A~~li~~~~~~~vLVv~~e~~s~ 202 (399)
T PLN03171 179 LAKDLAENNRGARVLVVAAEITLL 202 (399)
T ss_pred HHHHHHHhCCCCeEEEEEEecccc
Confidence 999999999999999999998654
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.3e-18 Score=174.13 Aligned_cols=141 Identities=11% Similarity=0.043 Sum_probs=112.5
Q ss_pred ceeeeeecccCCCCcccccccccC------CceEEEe-----cccccccccCccC-------------------------
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTG------KNIVFVD-----GVRTPFLLSGTDY------------------------- 66 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~------~~~~Ivg-----~~~t~~~~~~~~~------------------------- 66 (472)
..|.||++|+|++.++++++.... .+.++.. .-.|++.+|....
T Consensus 22 ~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 101 (391)
T PLN03169 22 ATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQRLDI 101 (391)
T ss_pred eEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHHHHH
Confidence 559999999999999997666421 1222111 0036666654332
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-ceeeecccCccHHHHHHHHHH
Q psy1213 67 ANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-PAHTVTMACISSNQGITTGIG 145 (472)
Q Consensus 67 ~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~Casg~~al~~A~~ 145 (472)
.+++..+|+.+|+++||+++|+++++||.||+++. +++..|..+..++..||++... .+++++.+|++++++|..|..
T Consensus 102 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~-t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~ 180 (391)
T PLN03169 102 ANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSS-SEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKD 180 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECc-CCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHH
Confidence 14567889999999999999999999999999887 4667888999999999997444 379999999999999999999
Q ss_pred HHHcCCCCEEEEEeecccC
Q psy1213 146 LIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 146 ~I~sG~~d~vLv~G~e~~s 164 (472)
+|++|..+.|||+++|..+
T Consensus 181 ~~~~~~~~~vLvv~~e~~s 199 (391)
T PLN03169 181 IAENNPGSRVLLTTSETTI 199 (391)
T ss_pred HHHhCCCCeEEEEEEEcCh
Confidence 9999999999999999854
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=162.00 Aligned_cols=135 Identities=11% Similarity=0.088 Sum_probs=114.6
Q ss_pred ceeeeeecccCCCCcccccccccCC---ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK---NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~---~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
++|.++++|+|++.+.++.+.+... +.++.+.+++.+.. ..++++..+|+.+|++++|+++ ++++||.++++
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~---~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~ 75 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAV---PPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFG 75 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEee---CCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEE
Confidence 4689999999999999877765432 22445555555543 2357788999999999999998 89999999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecc
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEF 162 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~ 162 (472)
+.++....+.++..++..||++..++++++.++|+++..||..|.++|++|..+.+||+++|.
T Consensus 76 t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~ 138 (379)
T TIGR01835 76 TESGIDQSKAAAVYVHGLLGLQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDI 138 (379)
T ss_pred eCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeeh
Confidence 988887667899999999999756899999999999999999999999999999999999986
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-17 Score=167.67 Aligned_cols=137 Identities=9% Similarity=0.049 Sum_probs=117.3
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCcc--CCCCCHHHHHHHHHHHHHHHcCCCcCccCEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTD--YANMMAHELARHSLIGILQKTGISKDLIDYIV 97 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~--~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi 97 (472)
+++|.++++|+|++.+.++.+.+... +.|| +++++.++.. .++++..+|+++|++++|+++|+++++||.|+
T Consensus 4 ~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~----~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlli 79 (459)
T PLN02577 4 NVGILAMEVYFPPTCVQQEALEAHDGVSKGKY----TIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLE 79 (459)
T ss_pred ccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHH----hhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 56899999999999999988876543 3454 4666665432 36789999999999999999999999999999
Q ss_pred EEeecCCCCCChHHHHHH---HHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCC--CEEEEEeeccc
Q psy1213 98 YGTVIQEVKTSNIGREAA---LSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAY--DVVVAGGVEFM 163 (472)
Q Consensus 98 ~g~~~~~~~~~~~a~~ia---~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~--d~vLv~G~e~~ 163 (472)
+++.++....+..+..++ ..+|.+ ++.+++++.+|.++.+||..|.++|++|.. +.+||+|+|..
T Consensus 80 vaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a 149 (459)
T PLN02577 80 VGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSA 149 (459)
T ss_pred EEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechh
Confidence 999999877888887775 577875 789999999999999999999999999975 99999999874
|
|
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.2e-16 Score=166.17 Aligned_cols=266 Identities=18% Similarity=0.221 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCCC-------------------ChHHHHHHHHcCCCCCCcee
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVKT-------------------SNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~~-------------------~~~a~~ia~~lGl~~~~~~~ 127 (472)
...|.+|+.++|+-|+||+|.++. ++++|.+.++..+ ..++.+|+..+.+ ++|++
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~ 164 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSF 164 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCch
Confidence 345899999999999999999876 5677765543210 1234566777778 69999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
.++++|+|+++++..|.+.|++|+||.+||.|+...-+ |... ..|
T Consensus 165 s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLk-Pt~s-----lQF----------------------------- 209 (2376)
T KOG1202|consen 165 SVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILK-PTTS-----LQF----------------------------- 209 (2376)
T ss_pred hhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEec-cchh-----hHH-----------------------------
Confidence 99999999999999999999999999999999875321 1100 000
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCC
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLK 287 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~ 287 (472)
++ .|++ .|.- +++.|++.
T Consensus 210 ------------------lR-------------------------Lgml---s~dG-sCkaFDea--------------- 227 (2376)
T KOG1202|consen 210 ------------------LR-------------------------LGML---SPDG-SCKAFDEA--------------- 227 (2376)
T ss_pred ------------------HH-------------------------hcCc---CCCC-cccchhcc---------------
Confidence 00 1111 1110 11223211
Q ss_pred CcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc-----ccccccHHHHHHHHHHHcCC
Q psy1213 288 PAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK-----DQLLLGPAYATPQVLERAGL 362 (472)
Q Consensus 288 p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~-----~~~~~~~~~a~~~Al~~Agl 362 (472)
.+|.. .+||.++++|.+...|++. |+.|+.....++... .+.+.-...-++..|+++|+
T Consensus 228 -----gnGY~-------Rseg~~avllqrk~~ArRv----YAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl 291 (2376)
T KOG1202|consen 228 -----GNGYC-------RSEGVVAVLLQRKSLARRV----YATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGL 291 (2376)
T ss_pred -----CCcee-------ecCceEEEEEehhHHHHHH----HHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCC
Confidence 23444 6999999999999999884 566666555444211 11122336778999999999
Q ss_pred CcCCcCEEEccCcchH----HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc-ccCCCCCcHHHHHHHHHH
Q psy1213 363 SLSDIDAWEVHEAFAG----QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS-IGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 363 ~~~dId~~e~hd~f~~----~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a-~Ghp~gasG~~~v~e~v~ 437 (472)
.|+++-|+|.|.+.|- ++.-.+-.+ ||.... -| + .-|..++ +||+--|||+-.++.++.
T Consensus 292 ~P~sv~YvEAHGtGTkVGDpQEaN~it~~----fC~~Rt--------~p---L-LIGSvKSNMGHaEPASGv~alaKill 355 (2376)
T KOG1202|consen 292 NPESVVYVEAHGTGTKVGDPQEANGITRF----FCATRT--------TP---L-LIGSVKSNMGHAEPASGVCALAKILL 355 (2376)
T ss_pred CcccEEEEEeccCCCCCCChHHhhhHHHH----HhhcCC--------Cc---e-EeeeccccCCCCCccchHHHHHHHHH
Confidence 9999999999999983 455555444 887422 23 2 2344444 899999999999999999
Q ss_pred HHhhc-------------------cC-----------Ccch--hhhhccCcceeEEEEEeCC
Q psy1213 438 RLVRE-------------------DG-----------QFGL--IAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 438 qL~~~-------------------~g-----------~~gl--~~~~~~GG~~~a~~l~~~~ 467 (472)
.|+.. .| +-|+ .++++.||.++-++|+..+
T Consensus 356 smE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp~~GGivGiNSFGFGGsN~HviLks~~ 417 (2376)
T KOG1202|consen 356 SMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLPWRGGIVGINSFGFGGSNAHVILKSNT 417 (2376)
T ss_pred HHHhCcCCCccccCCCCCCcchhccceeEEecCCCCccCceeeeeccccCCCceeEEeccCC
Confidence 99754 01 1222 2578999999999999653
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.8e-15 Score=149.72 Aligned_cols=91 Identities=13% Similarity=0.116 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHHHHHHHHHHHHcCC
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQGITTGIGLIAAGA 151 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~al~~A~~~I~sG~ 151 (472)
+|+.+|+++||+++|+++++||.||+++.++.. .|.++..++..||++..+. .++++.+|++++++|..|.++++++.
T Consensus 104 ~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~-~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~ 182 (393)
T PLN03172 104 KLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNA 182 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCC
Confidence 799999999999999999999999998887743 6889999999999974443 47889999999999999999999999
Q ss_pred CCEEEEEeecccC
Q psy1213 152 YDVVVAGGVEFMS 164 (472)
Q Consensus 152 ~d~vLv~G~e~~s 164 (472)
.++|||+++|..|
T Consensus 183 ~~~vLVV~~E~~S 195 (393)
T PLN03172 183 GSRVLVVCSEITA 195 (393)
T ss_pred CCeEEEEEEehhh
Confidence 9999999999865
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=4e-14 Score=140.37 Aligned_cols=277 Identities=15% Similarity=0.127 Sum_probs=195.9
Q ss_pred cceeeeeecccCCCCcccccccccCC---ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK---NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.++|.+++.|+|...+..+.+...-. +.+..|-+.+.+.- .-.++....|+++|++++|+++++|+.+|+.|++
T Consensus 2 ~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv---~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~v 78 (377)
T COG3425 2 MIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSV---PPWDEDAVTMAVEAARNALKRADIDPSKIGAVIV 78 (377)
T ss_pred ccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccC---CCCchhHHHHHHHHHHHHHhccCCCHHHCceEEE
Confidence 46799999999997777766554422 11233333332221 2247889999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHH
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLL 178 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~ 178 (472)
|+-+.....-..+..++..+|+++...++++..+|-++..||+.|...|.+|.-+.+||+|+|..-..|
T Consensus 79 gTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~----------- 147 (377)
T COG3425 79 GSESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAP----------- 147 (377)
T ss_pred ecCCCcccccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccCC-----------
Confidence 997776666678999999999988899999999999999999999999999999999999998621100
Q ss_pred HhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC
Q psy1213 179 LRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD 258 (472)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~ 258 (472)
T Consensus 148 -------------------------------------------------------------------------------- 147 (377)
T COG3425 148 -------------------------------------------------------------------------------- 147 (377)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEec
Q psy1213 259 ILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS 338 (472)
Q Consensus 259 ~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~ 338 (472)
-. . ..+. -++||+|+||..-+ ...+.+.+.+.-.
T Consensus 148 ---~~----~-------------------------~E~t-------~GAGavA~lIg~n~-------~~~a~~~~~~syt 181 (377)
T COG3425 148 ---GD----A-------------------------LEYT-------AGAGAVAFLIGKNP-------PIVAEFEGTGSYT 181 (377)
T ss_pred ---Cc----c-------------------------cCcc-------CCCceEEEEEccCC-------CeEEEecCceEEe
Confidence 00 0 0011 58999999988521 1223333444322
Q ss_pred cC-C-----cc---ccc----------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCC
Q psy1213 339 QD-P-----KD---QLL----------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGR 399 (472)
Q Consensus 339 ~~-p-----~~---~~~----------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~ 399 (472)
.+ | .. +.. .....|++..+++.|++++|.|++=.|-+|+-+..-.+..++ +-+
T Consensus 182 ~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~~~ka~k~l~---~~~----- 253 (377)
T COG3425 182 TDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKFPKKAAKSLG---FKE----- 253 (377)
T ss_pred cCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCchHHHHHHHhC---ccH-----
Confidence 21 1 11 000 112578888999999999999999999999999888888888 331
Q ss_pred CccCCCCCCCCcCCCCCCc---cccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcce
Q psy1213 400 SSKVGVPDLNKFNNWGGSL---SIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQG 458 (472)
Q Consensus 400 ~~~~G~~p~~~vN~~GG~~---a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~ 458 (472)
++|-+ |+. ..|+...++....++.++.+-. .+|++=|+.+.+-|-..
T Consensus 254 ---------e~v~~--~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s 303 (377)
T COG3425 254 ---------EQVKP--GLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGS 303 (377)
T ss_pred ---------hhcCc--cchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcce
Confidence 11111 111 2678888888888888777776 67777777655544333
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-14 Score=147.54 Aligned_cols=93 Identities=12% Similarity=0.109 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-ceeeecccCccHHHHHHHHHHHHHc
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-PAHTVTMACISSNQGITTGIGLIAA 149 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~Casg~~al~~A~~~I~s 149 (472)
..+|+.+|+++||+++|++++|||.||+++.++. ..|.++..++.+||+++.. .+++++.+|++++++|..|.+++++
T Consensus 106 a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~ 184 (401)
T PLN03170 106 VPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAEN 184 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHc
Confidence 3459999999999999999999999999887764 3788999999999997433 3799999999999999999999999
Q ss_pred CCCCEEEEEeecccC
Q psy1213 150 GAYDVVVAGGVEFMS 164 (472)
Q Consensus 150 G~~d~vLv~G~e~~s 164 (472)
+..++|||+++|..|
T Consensus 185 ~~~~~vLVV~~E~~S 199 (401)
T PLN03170 185 NRGARVLVVCSEITA 199 (401)
T ss_pred CCCCeEEEEEEehhh
Confidence 999999999999865
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=134.32 Aligned_cols=91 Identities=21% Similarity=0.268 Sum_probs=81.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHH
Q psy1213 68 NMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLI 147 (472)
Q Consensus 68 ~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I 147 (472)
+++..+|+.+|+++||+++|++++|||.+++|+. .+ ++.++..++..+|+ |.++++++|+|+.++|..|..+|
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~--Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~lI 119 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN--QIITANFVARDLGI----PFLGLYGACSTSMETLALGAMLV 119 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC--cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHHH
Confidence 5788899999999999999999999999999873 22 34578889999997 56999999999999999999999
Q ss_pred HcCCCCEEEEEeecccCC
Q psy1213 148 AAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 148 ~sG~~d~vLv~G~e~~s~ 165 (472)
++|.+|++||+++|..+.
T Consensus 120 ~SG~ad~VLVV~Ssh~S~ 137 (327)
T TIGR02845 120 DGGFADRVLAATSSHYAT 137 (327)
T ss_pred hCCCCCEEEEEEecccch
Confidence 999999999999988753
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.9e-14 Score=143.04 Aligned_cols=95 Identities=16% Similarity=0.102 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-ceeeecccCccHHHHHHHHHHHHH
Q psy1213 70 MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-PAHTVTMACISSNQGITTGIGLIA 148 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~Casg~~al~~A~~~I~ 148 (472)
...+|+.+|+++||+++|++++|||.||+++.++.. .|.++..++.+||++... .+++++.+|++++++|..|..+|+
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~ 178 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN-MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAE 178 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC-CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHH
Confidence 346799999999999999999999999999988854 789999999999997433 389999999999999999999999
Q ss_pred cCCCCEEEEEeecccCC
Q psy1213 149 AGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 149 sG~~d~vLv~G~e~~s~ 165 (472)
+|...+|||+++|.+|.
T Consensus 179 ~~~~~~VLVV~~E~~S~ 195 (389)
T PLN03168 179 NNKGARVLAVASEVTAV 195 (389)
T ss_pred hCCCCEEEEEEEehhhh
Confidence 99999999999998753
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.4e-13 Score=140.03 Aligned_cols=93 Identities=15% Similarity=0.139 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec-ccCccHHHHHHHHHHHHHc
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT-MACISSNQGITTGIGLIAA 149 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 149 (472)
.......|+.++|+++|++|+|||.+|+. ++++...|.++.+++.++|++.++.+++++ .+|++++.+|..|.+++++
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~ 266 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKA 266 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHh
Confidence 34466778899999999999999999985 556666799999999999997678999998 8999999999999999999
Q ss_pred CCCCEEEEEeecccC
Q psy1213 150 GAYDVVVAGGVEFMS 164 (472)
Q Consensus 150 G~~d~vLv~G~e~~s 164 (472)
+..+++||+++|.+|
T Consensus 267 ~~~~~aLVVstE~~S 281 (521)
T PLN02854 267 NPNSYAVVVSTENIT 281 (521)
T ss_pred CCCCeEEEEEEeeee
Confidence 999999999999876
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.9e-13 Score=129.75 Aligned_cols=91 Identities=23% Similarity=0.308 Sum_probs=81.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHH
Q psy1213 68 NMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLI 147 (472)
Q Consensus 68 ~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I 147 (472)
+++..+|+.+|+++||+++|++++|||.+++|+.. .+...+..++..+|+ |.++++++|+++..+|..|..+|
T Consensus 53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll---~Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~lI 125 (337)
T PRK08304 53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLL---NQIISANFAARELGI----PFLGLYGACSTMMESLALGSMLI 125 (337)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCC---CCcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999752 134567788888886 78999999999999999999999
Q ss_pred HcCCCCEEEEEeecccCC
Q psy1213 148 AAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 148 ~sG~~d~vLv~G~e~~s~ 165 (472)
++|.+|++||+++|.++.
T Consensus 126 ~SG~ad~VLVV~Ssh~s~ 143 (337)
T PRK08304 126 DGGFADRVLAATSSHFAT 143 (337)
T ss_pred hcCCCCEEEEEEcchhhh
Confidence 999999999999998764
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-12 Score=135.79 Aligned_cols=96 Identities=10% Similarity=0.094 Sum_probs=87.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec-ccCccHHHHHHHHHHHH
Q psy1213 69 MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT-MACISSNQGITTGIGLI 147 (472)
Q Consensus 69 ~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I 147 (472)
+...+++..|+++||+++|++|+|||.+|+ ++++....|.++..++.++|+++++.+++++ .+|++++.+|..|.+++
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll 248 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHH
Confidence 446779999999999999999999999987 6777766799999999999997678999999 69999999999999999
Q ss_pred HcCCCCEEEEEeecccCC
Q psy1213 148 AAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 148 ~sG~~d~vLv~G~e~~s~ 165 (472)
+++...++||+++|.+|.
T Consensus 249 ~~~~~~~aLVVstE~~S~ 266 (502)
T PLN02377 249 QVHRNTYAVVVSTENITQ 266 (502)
T ss_pred HcCCCCEEEEEEEecccc
Confidence 999999999999998764
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.4e-13 Score=139.34 Aligned_cols=92 Identities=12% Similarity=0.100 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-ceeeecccCccHHHHHHHHHHHHHcC
Q psy1213 72 HELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-PAHTVTMACISSNQGITTGIGLIAAG 150 (472)
Q Consensus 72 ~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~Casg~~al~~A~~~I~sG 150 (472)
.+|+.+|+++||+++|++++|||.+|+.+.++.. .|..+..++..||++... ..++++.+|+++.++|..|.++++++
T Consensus 103 ~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~ 181 (391)
T PLN03173 103 PKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENN 181 (391)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhC
Confidence 3799999999999999999999999999887744 688999999999997444 36788999999999999999999999
Q ss_pred CCCEEEEEeecccC
Q psy1213 151 AYDVVVAGGVEFMS 164 (472)
Q Consensus 151 ~~d~vLv~G~e~~s 164 (472)
..++|||+++|..|
T Consensus 182 ~~~~vLVV~~E~~S 195 (391)
T PLN03173 182 KGARVLVVCSEITA 195 (391)
T ss_pred CCCeEEEEEEehhh
Confidence 99999999999865
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.1e-13 Score=141.09 Aligned_cols=136 Identities=10% Similarity=0.046 Sum_probs=114.7
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCc--cCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGT--DYANMMAHELARHSLIGILQKTGISKDLIDYIV 97 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~--~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi 97 (472)
|++|.+|++|+|++.+.++.+.+... ..+| .++++.++. ..++++..+|+.+|++++|+++++++++||.|+
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~----~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Li 76 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKY----TIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLE 76 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHh----eechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 57899999999999999988865532 2233 345554431 345789999999999999999999999999999
Q ss_pred EEeecCCCCCChHHHHHHHH---cCCCCCCceeeecccCccHHHHHHHHHHHHHcCC--CCEEEEEeecc
Q psy1213 98 YGTVIQEVKTSNIGREAALS---AGFSDKTPAHTVTMACISSNQGITTGIGLIAAGA--YDVVVAGGVEF 162 (472)
Q Consensus 98 ~g~~~~~~~~~~~a~~ia~~---lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~--~d~vLv~G~e~ 162 (472)
+++.+++...+..+..++.. +|.+ ++.+++++.+|+|+.+||..|.++|++|. .+.+||+++|.
T Consensus 77 v~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 77 VGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred EECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 99999988888888888874 4564 78999999999999999999999999997 49999999997
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-12 Score=136.38 Aligned_cols=94 Identities=15% Similarity=0.186 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec-ccCccHHHHHHHHHHHHHc
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT-MACISSNQGITTGIGLIAA 149 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 149 (472)
..+|+.+|+++||+++|++|+|||.+|+.++++. ..|.++.+++.++|++.++.+++++ .+|++++.+|..|.+++++
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~ 226 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQV 226 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999998886 5789999999999997678999999 8999999999999999999
Q ss_pred CCCCEEEEEeecccCC
Q psy1213 150 GAYDVVVAGGVEFMSD 165 (472)
Q Consensus 150 G~~d~vLv~G~e~~s~ 165 (472)
+...++||+++|.+|.
T Consensus 227 ~~~~~aLVVstE~~S~ 242 (478)
T PLN02932 227 HRNTYALVVSTENITQ 242 (478)
T ss_pred CCCCeEEEEEEeeccc
Confidence 9999999999999764
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.9e-11 Score=116.16 Aligned_cols=88 Identities=18% Similarity=0.291 Sum_probs=76.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHH
Q psy1213 68 NMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLI 147 (472)
Q Consensus 68 ~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I 147 (472)
++...+|+.+|+++||+++|++++|||.+++|+... +..++..++..+|+ |.+.|+++|+++..+|..|..+|
T Consensus 51 EkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~n---Q~ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~~V 123 (334)
T PRK12404 51 EKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMN---QITPTSFAARTLGI----PYLGLFGACSTSMEGLALAALIV 123 (334)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC---CcCcHHHHHHHhCC----CccceeecCHHHHHHHHHHHHHH
Confidence 456778999999999999999999999999998762 33455688889986 45999999999999999999999
Q ss_pred HcCCCCEEEEEeecc
Q psy1213 148 AAGAYDVVVAGGVEF 162 (472)
Q Consensus 148 ~sG~~d~vLv~G~e~ 162 (472)
++|.+|++|++-+..
T Consensus 124 aSG~Ad~VLavtsSH 138 (334)
T PRK12404 124 NSGGAKYVLTGASSH 138 (334)
T ss_pred HcCCCCEEEEEeCcc
Confidence 999999999987644
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.6e-11 Score=124.14 Aligned_cols=93 Identities=12% Similarity=0.088 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec-ccCccHHHHHHHHHHHHHc
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT-MACISSNQGITTGIGLIAA 149 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 149 (472)
...+...|+++||+++|++|+|||.+|+.+ +++...|.++..++.++|++.++.+++++ .+|++++.+|..|.+++++
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~-S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a 254 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQV 254 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEC-CCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHc
Confidence 456889999999999999999999998874 46666789999999999997578999999 6999999999999999999
Q ss_pred CCCCEEEEEeecccC
Q psy1213 150 GAYDVVVAGGVEFMS 164 (472)
Q Consensus 150 G~~d~vLv~G~e~~s 164 (472)
+...++||+++|.+|
T Consensus 255 ~~~~~aLVVstE~~S 269 (511)
T PLN02192 255 HPNSYALVISMENIT 269 (511)
T ss_pred CCCCeEEEEEEEecc
Confidence 999999999999976
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=112.36 Aligned_cols=90 Identities=24% Similarity=0.371 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC-----EEEEEeecCCC------------------------CCChHHHHHHHHcCCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID-----YIVYGTVIQEV------------------------KTSNIGREAALSAGFS 121 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id-----~vi~g~~~~~~------------------------~~~~~a~~ia~~lGl~ 121 (472)
...|++.++.+||+|+|+++++++ ++++|+...+. ....++.+++..+|+
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl- 165 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL- 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC-
Confidence 557999999999999999885432 47788766521 012256789999999
Q ss_pred CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecc
Q psy1213 122 DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEF 162 (472)
Q Consensus 122 ~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~ 162 (472)
++|+++++++|+|++.||..|+++|++|++|.+||+|+|.
T Consensus 166 -~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~ 205 (254)
T PF00109_consen 166 -RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDA 205 (254)
T ss_dssp --SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE-
T ss_pred -CCccccccccccccccccchhccccccccccccccccccc
Confidence 6999999999999999999999999999999999999994
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.1e-10 Score=105.53 Aligned_cols=94 Identities=21% Similarity=0.190 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-cccCccHHHHHHHHHHHHH
Q psy1213 70 MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-TMACISSNQGITTGIGLIA 148 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~Casg~~al~~A~~~I~ 148 (472)
....|..+|.++||+++++.++|||.|++.++++-. .|.+-..+...||+++.+.-+-+ ..+|+++..++..|.++++
T Consensus 75 ~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~-~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r 153 (356)
T COG3424 75 EAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLA-TPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHHHHHHHhccCCCCHHHCcEEEEEeecccc-CCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence 456689999999999999999999999999887754 57777889999999866666655 4699999999999999999
Q ss_pred cCCCCEEEEEeecccC
Q psy1213 149 AGAYDVVVAGGVEFMS 164 (472)
Q Consensus 149 sG~~d~vLv~G~e~~s 164 (472)
..-..++|++.+|.-|
T Consensus 154 a~P~~~vlvV~vELCS 169 (356)
T COG3424 154 AAPDANVLVVCVELCS 169 (356)
T ss_pred hCccceEEEEEeeeee
Confidence 9999999999999754
|
|
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.4e-09 Score=97.47 Aligned_cols=139 Identities=12% Similarity=0.127 Sum_probs=101.7
Q ss_pred ccceeeeeecccCCCCcccccccccCC---ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK---NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi 97 (472)
.+++|.+|++|.|..-+..+.+.+... .-|-+|.++..+.- ...++....|++.|++.+|++.++++++|+.++
T Consensus 3 ~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av---~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~ 79 (174)
T PF01154_consen 3 QNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAV---PPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLI 79 (174)
T ss_dssp SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE-----TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEE
T ss_pred ccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEe---CCCcccHHHHHHHHHHHHHHHcCCCHHHccEEE
Confidence 467899999999995555544443322 12333444443332 235788999999999999999999999999999
Q ss_pred EEeecCCCCCChHHHHHHHHcCCC--CCCceeeecccCccHHHHHHHHHHHHHcCCC--CEEEEEeecc
Q psy1213 98 YGTVIQEVKTSNIGREAALSAGFS--DKTPAHTVTMACISSNQGITTGIGLIAAGAY--DVVVAGGVEF 162 (472)
Q Consensus 98 ~g~~~~~~~~~~~a~~ia~~lGl~--~~~~~~~v~~~Casg~~al~~A~~~I~sG~~--d~vLv~G~e~ 162 (472)
+|+-+.-...-..+..++..||++ ..+..+++..+|-+|..||..|..+|+++.. +.+||+++|.
T Consensus 80 vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 80 VGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp EE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred EeccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 998665545566889999999984 3466789999999999999999999999865 4999999986
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.9e-08 Score=102.45 Aligned_cols=96 Identities=14% Similarity=0.131 Sum_probs=83.4
Q ss_pred CCHHHHHHH-HHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecc-cCccHHHHHHHHHHH
Q psy1213 69 MMAHELARH-SLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM-ACISSNQGITTGIGL 146 (472)
Q Consensus 69 ~~~~~La~~-A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~-~Casg~~al~~A~~~ 146 (472)
....+|+.. |++++|+++|++|++||.+|+. .++....|.++..++.++|+++++..++++. +|+++..+|..|.++
T Consensus 131 ~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs-~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~l 209 (466)
T PLN00415 131 RHESELVIFGALNSLFKKTGIEPREVGIFIVN-CSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHH
Confidence 445666665 7778899999999999998864 4565457889999999999987889999997 999999999999999
Q ss_pred HHcCCCCEEEEEeecccCC
Q psy1213 147 IAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 147 I~sG~~d~vLv~G~e~~s~ 165 (472)
++++...++||+++|..|.
T Consensus 210 l~a~~~~~aLVVs~E~~S~ 228 (466)
T PLN00415 210 LKANPNTYAVIVSTENMTL 228 (466)
T ss_pred HHhCCCCEEEEEEEecccc
Confidence 9999999999999999764
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.3e-07 Score=91.57 Aligned_cols=94 Identities=18% Similarity=0.209 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec-ccCccHHHHHHHHHHHHHc
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT-MACISSNQGITTGIGLIAA 149 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 149 (472)
...++..|+.++|+++|++|+|||.+|+.++... ..|.++..|..++|+..++..+++. .||++++.+|..|.++++.
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~-ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~ 161 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFN-PTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQA 161 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCC-cCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHh
Confidence 4457789999999999999999999998776643 4688999999999998788888874 6999999999999999999
Q ss_pred CCCCEEEEEeecccCC
Q psy1213 150 GAYDVVVAGGVEFMSD 165 (472)
Q Consensus 150 G~~d~vLv~G~e~~s~ 165 (472)
-.-.++||+.+|..|.
T Consensus 162 ~p~~~ALVVstE~~s~ 177 (290)
T PF08392_consen 162 HPNSYALVVSTENISA 177 (290)
T ss_pred CCCcEEEEEEEeeccc
Confidence 9889999999998764
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-07 Score=81.20 Aligned_cols=104 Identities=25% Similarity=0.172 Sum_probs=65.8
Q ss_pred cEEEEEeEEeccC-Ccccc----cccHHHHHHHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCc
Q psy1213 328 KAYLRDFVYVSQD-PKDQL----LLGPAYATPQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSS 401 (472)
Q Consensus 328 ~a~I~g~~~~~~~-p~~~~----~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~ 401 (472)
|++|+|++...+. ..... ..+..+++++||+++|++++|||+||.|.+.+. .+..+++++... |....+
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~-~~~~~~---- 75 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARV-FGDSAR---- 75 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHH-HGGGGG----
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhh-hccccc----
Confidence 5789999997753 11111 223478999999999999999999999999997 356666665421 333221
Q ss_pred cCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc
Q psy1213 402 KVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE 442 (472)
Q Consensus 402 ~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~ 442 (472)
...+| |. .=+..+||+.+++|+..++.++++|+.+
T Consensus 76 -~~~~~---v~--s~K~~~Gh~~~asG~~~l~~~~l~l~~~ 110 (119)
T PF02801_consen 76 -QQPVP---VG--SVKSNIGHTEAASGLLSLAKALLALEHG 110 (119)
T ss_dssp -TSTSE---EE---THHHH-B-GGGHHHHHHHHHHHHHHHT
T ss_pred -ccccc---ee--ccccccccccccchHHHHHHHHHHHhcC
Confidence 01122 32 2233499999999999999999999865
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=9.5e-09 Score=105.76 Aligned_cols=141 Identities=19% Similarity=0.070 Sum_probs=95.7
Q ss_pred HHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeee
Q psy1213 235 EQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVI 314 (472)
Q Consensus 235 ~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL 314 (472)
.+.+|.+.....+..|.+++..--.||.+.+.++ ++++++++++++. +|++++|||+..||++++++
T Consensus 163 ~~~~yGitre~~d~~Av~sh~~A~~np~a~~~~e---------I~~~~v~~~~~~~----dp~~r~d~~~~~dg~a~l~~ 229 (392)
T COG0183 163 YAKRYGISREDQDEVAVKSHKNAAANPKAGFFDE---------ITPEDVLNSPVVA----DPLRRLDCSPTSDGAAALVP 229 (392)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCCCc---------eeeEEecCCceec----CCcccCCCCCChhhhcCcee
Confidence 3555553333333333333222223687774433 3567777775543 78999999999999999999
Q ss_pred cCHHHHHHcCCCCcEEEEEeEEeccCCc---cc-------ccccHHHHHHHHHHHcCCCcC--CcCEEEccCcchHHHHH
Q psy1213 315 MTEAKAKQLGLKPKAYLRDFVYVSQDPK---DQ-------LLLGPAYATPQVLERAGLSLS--DIDAWEVHEAFAGQILA 382 (472)
Q Consensus 315 ~s~e~A~~~g~~~~a~I~g~~~~~~~p~---~~-------~~~~~~~a~~~Al~~Agl~~~--dId~~e~hd~f~~~~~~ 382 (472)
++++.+ + .++.|-+....+.. .. .......|..++|+++|++|. ++|+.++||+|+..++.
T Consensus 230 a~~~~~---g----~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~ 302 (392)
T COG0183 230 AFEEVG---G----TVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLL 302 (392)
T ss_pred ccccCC---c----eEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCc
Confidence 997642 1 56666553211111 00 011235677899999999998 99999999999999999
Q ss_pred HHHhcCchhhhhhhcC
Q psy1213 383 NLKAMDSEWFAKNYMG 398 (472)
Q Consensus 383 ~~ealg~~~~~~~g~g 398 (472)
.+|+|| |||.+++
T Consensus 303 ~~edlg---l~e~nEa 315 (392)
T COG0183 303 ALEDLG---LAEKGEA 315 (392)
T ss_pred hhhhcC---ceecChH
Confidence 999999 9999886
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=98.47 E-value=9.4e-07 Score=83.29 Aligned_cols=93 Identities=17% Similarity=0.193 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-cccCccHHHHHHHHHHHHHc
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-TMACISSNQGITTGIGLIAA 149 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~Casg~~al~~A~~~I~s 149 (472)
..+|+.+|+++||+++|+++++|+.+|+.++++. ..|.+-.++...|||++.+.-+.+ ..||.+|..+|..|.+..++
T Consensus 100 a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~-~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~ 178 (226)
T PF00195_consen 100 APPLAEEAARKALAEAGLDPSDITHLVTVSCTGI-AAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARA 178 (226)
T ss_dssp HHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSS-ECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCcccceEEEEecCCc-CCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhC
Confidence 4569999999999999999999999999988875 468888899999999876666555 56999999999999999999
Q ss_pred CCCCEEEEEeecccC
Q psy1213 150 GAYDVVVAGGVEFMS 164 (472)
Q Consensus 150 G~~d~vLv~G~e~~s 164 (472)
..-.+|||+.+|..|
T Consensus 179 ~p~a~VLvv~vElcs 193 (226)
T PF00195_consen 179 NPGARVLVVCVELCS 193 (226)
T ss_dssp STT-EEEEEEEEEGG
T ss_pred CccceEEEEEEEeeE
Confidence 999999999999865
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.6e-06 Score=80.49 Aligned_cols=85 Identities=22% Similarity=0.318 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcC
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAG 150 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG 150 (472)
...|..+|+..||+++++.++|||.++.|.-... .-.+...+..+++ |-+-+-.+|++...+|.+|+.+|..|
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ---~i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQ---IISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCC---CCHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhh---hHHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCC
Confidence 4568899999999999999999999999865443 2345566667765 67888999999999999999999999
Q ss_pred CCCEEEEEeecc
Q psy1213 151 AYDVVVAGGVEF 162 (472)
Q Consensus 151 ~~d~vLv~G~e~ 162 (472)
-++++|++-+..
T Consensus 124 ~a~~vla~tSSH 135 (329)
T PF07451_consen 124 FADYVLAATSSH 135 (329)
T ss_dssp S-SEEEEEEEE-
T ss_pred CcceEEEEeccc
Confidence 999999876643
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00016 Score=57.11 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=35.0
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
|+++.+|++++.+|+.|..+|++|.++.+||+++|.++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 689999999999999999999999999999999999764
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00034 Score=56.42 Aligned_cols=89 Identities=24% Similarity=0.159 Sum_probs=60.5
Q ss_pred HHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
|+++|++++|||++=.|...........+.+| +|.+++..+ ..-+||...++-...+.+++
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lg-----------------i~~~~~~~~--~~~~Gn~~sa~~~~~L~~~~ 61 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLG-----------------IPPERFPDN--LAEYGNTGSASIPINLADAL 61 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHT-----------------S-GGGBE-T--HHHH-B-GGGHHHHHHHHHH
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcC-----------------CcHHHHHHH--HhccCcchhhhHHHHHHHHH
Confidence 68999999999999999998876666778888 455444332 24589999999888888887
Q ss_pred HHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 437 NRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 437 ~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
.+=+-+.|++.+..+.+.|..-.+++++
T Consensus 62 ~~g~~~~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 62 EEGRIKPGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp HTTSSCTTEEEEEEEEETTTEEEEEEEE
T ss_pred HcCCCCCCCEEEEEEEEhhheeEEEEEE
Confidence 7444456777777666655555666664
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >KOG1393|consensus | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0054 Score=61.01 Aligned_cols=136 Identities=11% Similarity=0.039 Sum_probs=100.7
Q ss_pred cceeeeeecccCCCCcccccccccCC---ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK---NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
+++|.+|-+|.|.+-+--+.+++... .-|-+|-+++..+-- -..+....|++.++.+.+++-.++++.|..+-|
T Consensus 11 dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~Mgfc---sdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEV 87 (462)
T KOG1393|consen 11 DVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFC---SDREDIISLSLTVVSRLMERYNIDPDSIGRLEV 87 (462)
T ss_pred ccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceeccc---CchhhhhhhhHHHHHHHHHHhCCChhhcceEEe
Confidence 78899999999998888888887765 557888888776632 123557889999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHc---CCCCCCceeeecccCccHHHHHHHHHHHHHcCC--CCEEEEEeec
Q psy1213 99 GTVIQEVKTSNIGREAALSA---GFSDKTPAHTVTMACISSNQGITTGIGLIAAGA--YDVVVAGGVE 161 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~l---Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~--~d~vLv~G~e 161 (472)
|+-+--...-..=..+-..+ |= ..+..++..++|=+|..||..|.+.|++-. -+.+||+..|
T Consensus 88 GTETiiDKSKSVKt~LMqLF~~sgN-tdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gD 154 (462)
T KOG1393|consen 88 GTETIIDKSKSVKTVLMQLFEESGN-TDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGD 154 (462)
T ss_pred cceeccccchHHHHHHHHHhhhcCC-CccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEee
Confidence 97432111222222333333 33 367889999999999999999999999742 3445555554
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.76 Score=43.40 Aligned_cols=89 Identities=13% Similarity=0.088 Sum_probs=69.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC------------------------CChHHHHHHHHcCCCCCCc
Q psy1213 70 MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK------------------------TSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~------------------------~~~~a~~ia~~lGl~~~~~ 125 (472)
....|+++++.+++++. +++|.+|+++..++.. -..++..++...+. ..+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCc
Confidence 36678888888887542 5677899988776521 01245567777776 689
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
..++..+-.++..||..|...++.| .+.||++.+|....
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p 145 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLP 145 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCC
Confidence 9999999999999999999999999 89999999988544
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=90.35 E-value=1.5 Score=43.94 Aligned_cols=94 Identities=22% Similarity=0.295 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEcc-----CcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCC
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVH-----EAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHP 423 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~h-----d~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp 423 (472)
..+|+++||++||++++|||++=+- ..|+......-+.||+ . +..++==-
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~-----------------~--------~~~afDl~ 110 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGL-----------------G--------GAPAFDLQ 110 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCC-----------------C--------Ccceeech
Confidence 3689999999999999999999753 3355555555566772 1 01122223
Q ss_pred CCCcHHHHHHHHHHHHhhcc-CCcchh---------------hhhcc-CcceeEEEEEeCC
Q psy1213 424 FAATGVRLTVHAANRLVRED-GQFGLI---------------AACAA-GGQGVGMIIERHP 467 (472)
Q Consensus 424 ~gasG~~~v~e~v~qL~~~~-g~~gl~---------------~~~~~-GG~~~a~~l~~~~ 467 (472)
-.|+|.........++-..+ .++.|+ ..|.. |-...|+||++.+
T Consensus 111 aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld~~dR~t~vlFgDGAgAvvl~~~~ 171 (323)
T COG0332 111 AACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDRDTCVLFGDGAGAVVLEATE 171 (323)
T ss_pred hhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCCHhhccceEEEcCCceEEEEecCC
Confidence 45778877777777665433 344443 12333 3345678888775
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=90.10 E-value=0.98 Score=46.57 Aligned_cols=99 Identities=14% Similarity=-0.028 Sum_probs=60.4
Q ss_pred CcEEEEEeEEeccCC--cccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccC
Q psy1213 327 PKAYLRDFVYVSQDP--KDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKV 403 (472)
Q Consensus 327 ~~a~I~g~~~~~~~p--~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~ 403 (472)
..+.|.|.|.+.... ......-..+|+++||++|||+++|||.+-+...+... .....+.||
T Consensus 8 ~~vaIvG~g~t~~~~~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~~~~~~la~~lG--------------- 72 (384)
T PRK06158 8 GRTAIVGAATAGLGEAPGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDALWGLSVAEYLG--------------- 72 (384)
T ss_pred CCEEEEEeeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCCCcHHHHHHHcC---------------
Confidence 457899998864211 11111223688999999999999999987654322111 122345676
Q ss_pred CCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchh
Q psy1213 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449 (472)
Q Consensus 404 G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~ 449 (472)
++..++. .-...++++...+..+...++....++.|+
T Consensus 73 --l~~~~~~-------~~~~g~~s~~~al~~A~~~I~sG~~d~vLV 109 (384)
T PRK06158 73 --IRPRFVD-------GTMIGGSSFLAHLLPAALALEAGLCDVALI 109 (384)
T ss_pred --CCCeeec-------cccCccHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 2211111 123456778888888889998776677775
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=89.91 E-value=0.9 Score=45.51 Aligned_cols=40 Identities=20% Similarity=0.089 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccCcch-----HHHHHHHHhcC
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHEAFA-----GQILANLKAMD 388 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd~f~-----~~~~~~~ealg 388 (472)
...|+++||+++|++++|||++-...+.+ .......+.||
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg 100 (326)
T PRK05963 56 AASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLG 100 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhC
Confidence 36899999999999999999997533322 22334456666
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=88.46 E-value=1.3 Score=46.76 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEcc----CcchHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVH----EAFAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~h----d~f~~~~~~~~ealg 388 (472)
..|+++||+++|++|+|||++=+. +.++....+..+.||
T Consensus 153 ~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lG 195 (478)
T PLN02932 153 IGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFK 195 (478)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhC
Confidence 578999999999999999998543 455556666778888
|
|
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=87.59 E-value=0.86 Score=36.31 Aligned_cols=73 Identities=19% Similarity=0.159 Sum_probs=44.5
Q ss_pred HHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee----ecccCccHHHHHHHHHH--HHHcCCCCEEE
Q psy1213 83 LQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT----VTMACISSNQGITTGIG--LIAAGAYDVVV 156 (472)
Q Consensus 83 l~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~----v~~~Casg~~al~~A~~--~I~sG~~d~vL 156 (472)
|+++|++++|||.++.-+.. ......+...+|++......+ =+.+|++-..+|..+.+ .|+ .-|.+|
T Consensus 1 L~~~g~~~~did~~i~hq~~-----~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~--~Gd~vl 73 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS-----KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIK--PGDRVL 73 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS-----HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSC--TTEEEE
T ss_pred CccccCCHHHCCEEEeCCCC-----HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCC--CCCEEE
Confidence 68999999999999875422 234556888999973322122 25667777777777666 444 447888
Q ss_pred EEeecc
Q psy1213 157 AGGVEF 162 (472)
Q Consensus 157 v~G~e~ 162 (472)
++++-.
T Consensus 74 ~~~~G~ 79 (90)
T PF08541_consen 74 LVGFGA 79 (90)
T ss_dssp EEEEET
T ss_pred EEEEEh
Confidence 887744
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=87.43 E-value=1.9 Score=42.27 Aligned_cols=96 Identities=19% Similarity=0.354 Sum_probs=58.9
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEcc-Ccch---HHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVH-EAFA---GQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFA 425 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~h-d~f~---~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~g 425 (472)
..+++.+|+++|++|+|||++=++ ..|. ...-+.++.+| +.+ +...+|.+| .|
T Consensus 88 f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~---mr~------------di~~~nLsG--------MG 144 (290)
T PF08392_consen 88 FGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYG---MRS------------DIKSYNLSG--------MG 144 (290)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhC---CCc------------CeeeecccC--------Cc
Confidence 467899999999999999987654 3333 33445567777 321 333567765 34
Q ss_pred CcHHHHHHHHHHHHhhc-cCCcch--------------------hhhhccCcceeEEEEEeCCC
Q psy1213 426 ATGVRLTVHAANRLVRE-DGQFGL--------------------IAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 426 asG~~~v~e~v~qL~~~-~g~~gl--------------------~~~~~~GG~~~a~~l~~~~~ 468 (472)
+++....++++++|-+. .+.++| +.+|.++=.|+|+||...+.
T Consensus 145 CsAgliai~lA~~lL~~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 145 CSAGLIAIDLAKDLLQAHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred chhhHHHHHHHHHHHHhCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCcc
Confidence 55555556666666432 222222 34555555578888887554
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=86.54 E-value=1.9 Score=43.71 Aligned_cols=85 Identities=16% Similarity=0.226 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee-----ee-cccCccHHHHHHHHH
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH-----TV-TMACISSNQGITTGI 144 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~-----~v-~~~Casg~~al~~A~ 144 (472)
....+..+++++|+++|++++|||.++.-... ...-..+...+|++...... ++ |++++|-..+|..+.
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~-----~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~ 280 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN-----GKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVL 280 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC-----hHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHH
Confidence 44556688899999999999999988773221 23455678899987321111 22 556777778888887
Q ss_pred HHHHcCCCCEEEEEeecc
Q psy1213 145 GLIAAGAYDVVVAGGVEF 162 (472)
Q Consensus 145 ~~I~sG~~d~vLv~G~e~ 162 (472)
..++.| |.+|++|+-.
T Consensus 281 ~~~~~G--d~vll~~~G~ 296 (345)
T TIGR00748 281 DIAEPG--DRILAVSYGS 296 (345)
T ss_pred HhcCCC--CEEEEEEecC
Confidence 766666 6788877644
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=86.47 E-value=2.4 Score=45.17 Aligned_cols=39 Identities=10% Similarity=-0.000 Sum_probs=29.0
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEcc---C-cchHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVH---E-AFAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~h---d-~f~~~~~~~~ealg 388 (472)
..|+++||+++|++|+|||++=+. + .++....+..+.||
T Consensus 177 ~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LG 219 (502)
T PLN02377 177 FGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYK 219 (502)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhC
Confidence 578999999999999999998542 1 22344556667777
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=86.10 E-value=3.9 Score=41.00 Aligned_cols=25 Identities=24% Similarity=0.264 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEcc
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVH 373 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~h 373 (472)
...|+++||+++|++++|||++-..
T Consensus 55 a~~A~~~aL~~ag~~~~dId~vi~~ 79 (326)
T CHL00203 55 AAEAANKALDKAHMDPLEIDLIILA 79 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 3688999999999999999998754
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=84.70 E-value=4.1 Score=42.23 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=30.2
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEcc----CcchHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVH----EAFAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~h----d~f~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++=+. +.++.......+.||
T Consensus 113 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LG 155 (399)
T PLN03171 113 AEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLG 155 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhC
Confidence 678999999999999999998652 334555555667777
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=84.07 E-value=5.8 Score=42.42 Aligned_cols=109 Identities=14% Similarity=0.006 Sum_probs=63.2
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-c
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-P 125 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-~ 125 (472)
+.+||.|.+...-.......++.........|+++|++.+|++++|||.+-+-.. .+.......+.|||.... .
T Consensus 266 ~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydc-----F~~~~~~~~E~LGl~~~g~~ 340 (498)
T PRK08257 266 RWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSC-----FPSAVQVAARELGLDLDDPR 340 (498)
T ss_pred ceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccC-----CHHHHHHHHHHcCcCCCCCC
Confidence 3677877664311110001122222333456899999999999999998755321 122333445678875321 1
Q ss_pred eeeecc--------cCccHHHHHHHHHHHHHcCCCCEEEEEee
Q psy1213 126 AHTVTM--------ACISSNQGITTGIGLIAAGAYDVVVAGGV 160 (472)
Q Consensus 126 ~~~v~~--------~Casg~~al~~A~~~I~sG~~d~vLv~G~ 160 (472)
.++++. ..++++..+..++..++....++.|+.+.
T Consensus 341 pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~~ 383 (498)
T PRK08257 341 PLTVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTAN 383 (498)
T ss_pred CcCCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEECC
Confidence 233332 23446677788888888666788888664
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.74 E-value=2.3 Score=43.86 Aligned_cols=97 Identities=22% Similarity=0.071 Sum_probs=56.2
Q ss_pred EEEEEeEEecc-C--CcccccccHHHHHHHHHHHcCCCcCCcCEEEcc---Ccch---HHHHHHHHhcCchhhhhhhcCC
Q psy1213 329 AYLRDFVYVSQ-D--PKDQLLLGPAYATPQVLERAGLSLSDIDAWEVH---EAFA---GQILANLKAMDSEWFAKNYMGR 399 (472)
Q Consensus 329 a~I~g~~~~~~-~--p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~h---d~f~---~~~~~~~ealg~~~~~~~g~g~ 399 (472)
+.|.|.|.+.. . +......-..+|+++||++|||+++|||.+=+. |.|. .......+.||+ ..
T Consensus 5 v~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl---~~----- 76 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGA---TG----- 76 (386)
T ss_pred EEEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCC---CC-----
Confidence 68899887543 1 111011123688999999999999999987553 2221 111233466771 00
Q ss_pred CccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchh
Q psy1213 400 SSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449 (472)
Q Consensus 400 ~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~ 449 (472)
.|. +++ +..+++|...+..+...++....++.|+
T Consensus 77 ------~~~--~~v--------~~~casg~~al~~A~~~I~sG~~~~vLV 110 (386)
T PRK08313 77 ------KPL--IRV--------HTAGSVGGSTAVVAASLVQSGVYRRVLA 110 (386)
T ss_pred ------Cce--EEE--------eccCHHHHHHHHHHHHHHHCCCCCEEEE
Confidence 121 111 2234567777778888887655566665
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.12 E-value=2.8 Score=43.37 Aligned_cols=98 Identities=18% Similarity=0.012 Sum_probs=57.8
Q ss_pred cEEEEEeEEeccCC--cccccccHHHHHHHHHHHcCCCcCCcCEEEcc---CcchH---HHHHHHHhcCchhhhhhhcCC
Q psy1213 328 KAYLRDFVYVSQDP--KDQLLLGPAYATPQVLERAGLSLSDIDAWEVH---EAFAG---QILANLKAMDSEWFAKNYMGR 399 (472)
Q Consensus 328 ~a~I~g~~~~~~~p--~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~h---d~f~~---~~~~~~ealg~~~~~~~g~g~ 399 (472)
.+.|.|.|.+.-.. ......-..+|+++||+++|++++|||.+=+. +.+.. ......+.+| +.
T Consensus 10 ~vaIvG~g~t~~~~~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG---~~------ 80 (392)
T PRK06065 10 RVAVIGAGLTLFRRRLLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSG---GI------ 80 (392)
T ss_pred ceEEEEecccCCcCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcC---CC------
Confidence 46899988764211 11111123688999999999999999987553 22211 1111224444 10
Q ss_pred CccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchh
Q psy1213 400 SSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449 (472)
Q Consensus 400 ~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~ 449 (472)
+ .|. +++ +..++||...+..+...++....++.|+
T Consensus 81 ----~-~~~--~~V--------~~~gasG~~al~~A~~~I~sG~ad~vLV 115 (392)
T PRK06065 81 ----R-KPV--SRV--------YVGGATGVMTAIAGWYHVASGLCQKVLA 115 (392)
T ss_pred ----C-CCe--EEE--------ecCchhHHHHHHHHHHHHhCCCCCEEEE
Confidence 0 121 122 2246888888888988898666666665
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.83 E-value=4 Score=42.16 Aligned_cols=99 Identities=20% Similarity=0.189 Sum_probs=59.7
Q ss_pred CcEEEEEeEEecc--CCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccC
Q psy1213 327 PKAYLRDFVYVSQ--DPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKV 403 (472)
Q Consensus 327 ~~a~I~g~~~~~~--~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~ 403 (472)
..+.|.|.|.+.- .+......-..+|++.||+.|||+++|||.+=.+...+. ......+.||
T Consensus 5 ~~vaIvG~g~t~~~~~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~lG--------------- 69 (388)
T PRK08142 5 GKAYIVGAYEHPTRKAPDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGLGPASMVDYLG--------------- 69 (388)
T ss_pred CCEEEEEEeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCccHHHHHHhCC---------------
Confidence 3578999988632 111111122368899999999999999997633211111 1122446777
Q ss_pred CCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchh
Q psy1213 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449 (472)
Q Consensus 404 G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~ 449 (472)
+...++. ..+..|++|...+.++...++....+..|+
T Consensus 70 --l~~~~~~-------~v~~gg~s~~~a~~~A~~~I~sG~~d~vLv 106 (388)
T PRK08142 70 --LKLRHVD-------STETGGSSYLAHVGHAAQAIAAGKCSVALI 106 (388)
T ss_pred --CCCeeec-------cccCCcHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 2211111 123467888888999999998665566665
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=82.72 E-value=4.5 Score=41.79 Aligned_cols=39 Identities=23% Similarity=0.145 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCc----chHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEA----FAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~----f~~~~~~~~ealg 388 (472)
.+|+++||+++|++++|||++=+.-| ++.......+.||
T Consensus 106 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LG 148 (389)
T PLN03168 106 AEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLG 148 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhC
Confidence 68899999999999999999965533 3444555667777
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=82.62 E-value=4.5 Score=41.71 Aligned_cols=98 Identities=17% Similarity=0.057 Sum_probs=58.4
Q ss_pred cEEEEEeEEeccCCc-ccc-cccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCC
Q psy1213 328 KAYLRDFVYVSQDPK-DQL-LLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGV 405 (472)
Q Consensus 328 ~a~I~g~~~~~~~p~-~~~-~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~ 405 (472)
.+.|.|.|.+.-... ... ..-..+|++.||+.|||+++|||.+-++...........+.||
T Consensus 5 ~v~IvG~g~t~~~r~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~l~~~lG----------------- 67 (386)
T PRK07855 5 KAAIVGIGATEFSKNSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMDTNPEIAVARALG----------------- 67 (386)
T ss_pred CEEEEEeeecccccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCccccHHHHHHHCC-----------------
Confidence 478999988532111 101 1123688999999999999999977542111111122446677
Q ss_pred CCC-CCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchh
Q psy1213 406 PDL-NKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449 (472)
Q Consensus 406 ~p~-~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~ 449 (472)
+.. ..+. .=+..|++|...+.++...++....+..|+
T Consensus 68 l~~~~~~~-------~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv 105 (386)
T PRK07855 68 IGELKFFS-------RIHYGGGAACATVQQAAMAVATGVADVVVC 105 (386)
T ss_pred CCCCccee-------eecCCcHHHHHHHHHHHHHHHCCCCCEEEE
Confidence 221 1111 113457888888889999998666666665
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=82.02 E-value=4.2 Score=40.95 Aligned_cols=23 Identities=26% Similarity=0.286 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWE 371 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e 371 (472)
...|+++||+++|++++|||++=
T Consensus 57 a~~Aa~~aL~~ag~~~~dId~li 79 (339)
T PRK06840 57 AIAAAKPALKQAGVDPAAIDVVI 79 (339)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 36899999999999999999874
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=81.84 E-value=11 Score=38.36 Aligned_cols=71 Identities=15% Similarity=0.081 Sum_probs=40.0
Q ss_pred CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCC
Q psy1213 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSD 122 (472)
Q Consensus 47 ~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~ 122 (472)
..++|.+.+...-........+.....-...|+++||+++|++++|||.+-+-.. .........+.+|+..
T Consensus 225 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~-----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 225 RPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDC-----FTIAELLALEDLGFCE 295 (375)
T ss_pred CCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCc-----ChHHHHHHHHHcCCCC
Confidence 3678888765422221111111112334457999999999999999998755221 1222333445667653
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=81.12 E-value=4.4 Score=43.25 Aligned_cols=38 Identities=16% Similarity=0.089 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcc-----hHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAF-----AGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f-----~~~~~~~~ealg 388 (472)
..|+++||+++|++|+|||++=+. |. +....+..+.+|
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lG 223 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 223 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhC
Confidence 478999999999999999988544 33 334555567777
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 472 | ||||
| 3ss6_A | 394 | Crystal Structure Of The Bacillus Anthracis Acetyl- | 3e-47 | ||
| 3goa_A | 387 | Crystal Structure Of The Salmonella Typhimurium Fad | 2e-43 | ||
| 1ulq_A | 401 | Crystal Structure Of Tt0182 From Thermus Thermophil | 6e-43 | ||
| 1wdk_C | 390 | Fatty Acid Beta-Oxidation Multienzyme Complex From | 1e-42 | ||
| 4e1l_A | 395 | Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla | 2e-42 | ||
| 2ib7_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 9e-42 | ||
| 4dd5_A | 396 | Biosynthetic Thiolase (Thla1) From Clostridium Diff | 9e-42 | ||
| 2wku_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h M | 2e-41 | ||
| 1m1t_A | 392 | Biosynthetic Thiolase, Q64a Mutant Length = 392 | 9e-41 | ||
| 1dlu_A | 389 | Unliganded Biosynthetic Thiolase From Zoogloea Rami | 1e-40 | ||
| 2wl6_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h-H | 1e-40 | ||
| 2vu2_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Wit | 1e-40 | ||
| 2f2s_A | 406 | Human Mitochondrial Acetoacetyl-Coa Thiolase Length | 2e-40 | ||
| 2ibu_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 2e-40 | ||
| 2wkv_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-40 | ||
| 2wl5_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 8e-40 | ||
| 2wl4_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-39 | ||
| 1m1o_A | 392 | Crystal Structure Of Biosynthetic Thiolase, C89a Mu | 3e-39 | ||
| 1qfl_A | 389 | Biosynthetic Thiolase From Zoogloea Ramigera In Com | 3e-39 | ||
| 1m4s_A | 392 | Biosynthetic Thiolase, Cys89 Acetylated, Unliganded | 4e-39 | ||
| 2iik_A | 418 | Crystal Structure Of Human Peroxisomal Acetyl-Coa A | 4e-39 | ||
| 2wl5_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 3e-38 | ||
| 2wl4_D | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 5e-38 | ||
| 2wl4_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 5e-38 | ||
| 2c7y_A | 404 | Plant Enzyme Length = 404 | 5e-37 | ||
| 2wu9_A | 442 | Crystal Structure Of Peroxisomal Kat2 From Arabidop | 5e-37 | ||
| 2wl4_B | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-36 | ||
| 1afw_A | 393 | The 1.8 Angstrom Crystal Structure Of The Dimeric P | 2e-36 | ||
| 1pxt_A | 390 | The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac | 3e-36 | ||
| 2wkt_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 4e-36 | ||
| 2wkt_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-34 | ||
| 2wua_A | 440 | Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas | 2e-34 | ||
| 1wl4_A | 397 | Human Cytosolic Acetoacetyl-Coa Thiolase Complexed | 2e-29 | ||
| 3svk_A | 407 | Crystal Structure Of Acetyl-Coa Acetyltransferase F | 2e-27 |
| >pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394 | Back alignment and structure |
|
| >pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387 | Back alignment and structure |
|
| >pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401 | Back alignment and structure |
|
| >pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390 | Back alignment and structure |
|
| >pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395 | Back alignment and structure |
|
| >pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396 | Back alignment and structure |
|
| >pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392 | Back alignment and structure |
|
| >pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389 | Back alignment and structure |
|
| >pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392 | Back alignment and structure |
|
| >pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406 | Back alignment and structure |
|
| >pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392 | Back alignment and structure |
|
| >pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389 | Back alignment and structure |
|
| >pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392 | Back alignment and structure |
|
| >pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418 | Back alignment and structure |
|
| >pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2C7Y|A Chain A, Plant Enzyme Length = 404 | Back alignment and structure |
|
| >pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442 | Back alignment and structure |
|
| >pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393 | Back alignment and structure |
|
| >pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390 | Back alignment and structure |
|
| >pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440 | Back alignment and structure |
|
| >pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397 | Back alignment and structure |
|
| >pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 325 bits (836), Expect = e-108
Identities = 138/431 (32%), Positives = 208/431 (48%), Gaps = 58/431 (13%)
Query: 47 KNIVFVDGVRTPF-LLSGTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQE 104
+ +V VD +RTP G + N+ A +L+ H + +L + ++ +D I +G V Q
Sbjct: 2 EQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQT 61
Query: 105 VKTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
++ NI R AAL A PA TV C SS Q + +I G V + GGVE M
Sbjct: 62 LEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHM 121
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
+P+ H L R MG +A+
Sbjct: 122 GHVPMSHGVDFHPGLSRNV----------------AKAAGM-------------MGLTAE 152
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDK-----TISKDNGVRV 277
L+ +SR+ QD++A RSH A A + G I+P D + D +R
Sbjct: 153 MLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRP 212
Query: 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
+T E ++ L+PAF G+VTA SS L+DGA+A ++M+E++A++LGLKP+A +R
Sbjct: 213 ETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAV 272
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
V DP + GP A+ L++AGLS SDID +E++EAFA QIL +K +
Sbjct: 273 VGCDPS-IMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDL--------- 322
Query: 397 MGRSSKVGVPD--LNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAA 454
G+ + K N GG++++GHP +G R++ N + R+D QFGL C
Sbjct: 323 -------GLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDAQFGLATMCIG 375
Query: 455 GGQGVGMIIER 465
GQG+ + ER
Sbjct: 376 LGQGIATVFER 386
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 322 bits (828), Expect = e-106
Identities = 135/447 (30%), Positives = 206/447 (46%), Gaps = 64/447 (14%)
Query: 36 SPRKSVKDKTGKNIVFVDGVRTPFLLS--GTDYANMMAHELARHSLIGILQKTGISKDLI 93
S G ++V V RTP S G + + +L L +++KT ++ +
Sbjct: 19 SAAYQRTSLYGDDVVIVAAHRTPLCKSKRGN-FKDTYPDDLLAPVLRALIEKTNLNPSEV 77
Query: 94 DYIVYGTVIQE-VKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAY 152
IV GTV+ + ++ R AA AGF + TV C S Q + I AG Y
Sbjct: 78 GDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFY 137
Query: 153 DVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEF 212
D+ + G+E M+ P+ + + + +A + +P
Sbjct: 138 DIGIGAGLESMTTNPMAWEGSVNPAVKKFAQA--------------QNCLLP-------- 175
Query: 213 SSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV------- 264
MG +++ +A F VSR+EQD+ A+ SH A A G D I+P++
Sbjct: 176 -----MGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKT 230
Query: 265 GDK---TISKDNGVRVST-PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKA 320
GD+ T+S D+G+R +T + KLKP F K G+ TA NSS ++DGA A ++M + A
Sbjct: 231 GDEKPITVSVDDGIRPTTTLASLGKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVA 289
Query: 321 KQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQI 380
Q GL R F V DP + +GPA A P ++ AGL L DID +E++EAFA Q
Sbjct: 290 MQKGLPVLGVFRTFAAVGVDP-AIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQF 348
Query: 381 LANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLV 440
+ K+G+ D K N GG+++IGHP ATG R + +
Sbjct: 349 VYCRN----------------KLGL-DPEKINVNGGAMAIGHPLGATGARCVATLLHEMK 391
Query: 441 R--EDGQFGLIAACAAGGQGVGMIIER 465
R +D +FG+++ C G G + ER
Sbjct: 392 RRGKDCRFGVVSMCIGTGMGAAAVFER 418
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 320 bits (823), Expect = e-106
Identities = 131/457 (28%), Positives = 209/457 (45%), Gaps = 59/457 (12%)
Query: 22 NMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGT-DYANMMAHELARHSLI 80
+ + + + ++V V G RT +G + + EL +
Sbjct: 5 HHHSSGVDLGTENLYFQSMAPQASAADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMT 64
Query: 81 GILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGI 140
+L+ + + + I G V+Q + + R A + + P TV C S Q +
Sbjct: 65 AVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAV 124
Query: 141 TTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200
+ G I G+YD+ +A GVE MS + + S L+ KA D
Sbjct: 125 ASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKA--------------RD 170
Query: 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-I 259
IP MG +++ +A F +SR++QD +AL S A +AQ KG I
Sbjct: 171 CLIP-------------MGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEI 217
Query: 260 LPIQV---------GDKTISKDNGVRVS-TPEQMAKLKPAFVKPHGSVTAANSSFLTDGA 309
+P+ T+++D G+R S T E +AKLKPAF K GS TA NSS ++DGA
Sbjct: 218 VPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAF-KKDGSTTAGNSSQVSDGA 276
Query: 310 SACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDA 369
+A ++ +KA++LGL LR + V P D + +GPAYA P L++AGL++SD+D
Sbjct: 277 AAILLARRSKAEELGLPILGVLRSYAVVGVPP-DIMGIGPAYAIPVALQKAGLTVSDVDI 335
Query: 370 WEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429
+E++EAFA Q ++ K+ + K N GG++++GHP TG
Sbjct: 336 FEINEAFASQAAYCVE----------------KLRL-PPEKVNPLGGAVALGHPLGCTGA 378
Query: 430 RLTVHAANRLVREDGQ-FGLIAACAAGGQGVGMIIER 465
R + N L R + +G+++ C G G + E
Sbjct: 379 RQVITLLNELKRRGKRAYGVVSMCIGTGMGAAAVFEY 415
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 319 bits (819), Expect = e-106
Identities = 137/429 (31%), Positives = 207/429 (48%), Gaps = 54/429 (12%)
Query: 47 KNIVFVDGVRTPF-LLSGTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQE 104
+++V VD RTP G + N A +++ H + +L++ + + ++ +++G V Q
Sbjct: 5 RDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQT 64
Query: 105 VKTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
++ NI R A+L + A TV+ C SS + T I G DV V GGVE M
Sbjct: 65 LEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 124
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
+ + H P L A + MG +A+
Sbjct: 125 GHVSMMH-----------GVDPNPHMSLY-----------------AAKA-SGMMGLTAE 155
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDK-----TISKDNGVRV 277
L +SR++QD +A+RSH LA +A +G D I+P+Q D+ D +R
Sbjct: 156 MLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRP 215
Query: 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
+T E +A LKPAF G+VTA SS +TDGAS ++M+ +AK LGL+P A +R
Sbjct: 216 DTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAV 275
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
DP + GP AT + L+RAGL+++DID E++EAFA Q L LK +
Sbjct: 276 AGVDPA-IMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDL--------- 325
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
KV K N GG++++GHPF +G R++ N + + G FGL C G
Sbjct: 326 -----KVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLG 380
Query: 457 QGVGMIIER 465
QG+ + ER
Sbjct: 381 QGIATVFER 389
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 317 bits (814), Expect = e-105
Identities = 119/439 (27%), Positives = 190/439 (43%), Gaps = 58/439 (13%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGTDY----ANMMAHELARHSLIGILQK----TGIS 89
+ S+ +K +++V V R+ G + ++ L + L + +
Sbjct: 1 KNSLLEKRPEDVVIVAANRSAI---GKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRAD 57
Query: 90 KDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAA 149
+LI+ + G V+ + R A L++G TP + C S + I
Sbjct: 58 LNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKV 117
Query: 150 GAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAV 209
G D+ +A GVE M++ N + IP
Sbjct: 118 GQIDIGLALGVESMTNNY-----------KNVNPLGMISSEELQKNREAKKCLIP----- 161
Query: 210 AEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGD-K 267
MG + + +AA FK+SRK+QDE+A S+ A +A+ +G D ILPI++ D
Sbjct: 162 --------MGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGS 213
Query: 268 TISKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLK 326
D G R T E ++ ++PAF+K G+ TA N+S ++DG + ++ + A QL L
Sbjct: 214 ICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLP 273
Query: 327 PKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKA 386
DF V P + + +GPAYA P+VLE GL + DID +E++EAFA Q L +
Sbjct: 274 VLGRYIDFQTVGVPP-EIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHK 332
Query: 387 MDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQF 446
+ DLNK N GG++++GHP TG R L + Q
Sbjct: 333 L--GI---------------DLNKVNPRGGAIALGHPLGCTGARQVATILRELKK--DQI 373
Query: 447 GLIAACAAGGQGVGMIIER 465
G+++ C G G I +
Sbjct: 374 GVVSMCIGTGMGAAAIFIK 392
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 314 bits (806), Expect = e-103
Identities = 148/430 (34%), Positives = 210/430 (48%), Gaps = 52/430 (12%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
N+V VR+P G N+ ELA L +++ G+ +D ++ G IQ
Sbjct: 5 HNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD 64
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
+N R AAL+AGF D +T+ C S Q I + I G +VVVAGGVE MS
Sbjct: 65 EANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSS 124
Query: 167 P--IRHSR---KMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHS 221
P ++ R +++ + T + L D MG +
Sbjct: 125 PYALKQHRWGQRLQHGEI----RDTVWEVL-------EDPI-----------HHIMMGET 162
Query: 222 ADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDNGVR 276
A+ L ++++R+EQDE ALRSHTLA +A E GY D I+PI + + SKD R
Sbjct: 163 AENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPR 222
Query: 277 V-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFV 335
T E++A LKPAF + GSVTA N+S L DG++ V+M+E KAK+ GL+P A + +
Sbjct: 223 ADITAEKLAGLKPAF-RKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYS 281
Query: 336 YVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKN 395
DPK + +GPA A + LE+ SL D D E++EAFA Q LA K + +
Sbjct: 282 VAGVDPK-IMGIGPAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKEL--DL---- 334
Query: 396 YMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAG 455
D K N G + +GHP TG R+TV + L R + G+ + C G
Sbjct: 335 -----------DREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGLEKGIASLCVGG 383
Query: 456 GQGVGMIIER 465
G GV + IE
Sbjct: 384 GIGVALFIEA 393
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 310 bits (796), Expect = e-102
Identities = 131/435 (30%), Positives = 214/435 (49%), Gaps = 61/435 (14%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
+ +V RT G + ++ A EL + +++ I+ D+ID + G V+
Sbjct: 7 REVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL 66
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
NI R+ AL AG + PA T+ + C S + ++ LIA G D+++ GG E MS
Sbjct: 67 GQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMS 126
Query: 167 P--IRHSR--------KMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGE 216
P + +R +++ D L D F +
Sbjct: 127 PYLVPSARYGARMGDAAFVDSMIK--------DGLS-------DIF-----------NNY 160
Query: 217 TMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISK 271
MG +A+ +A + ++R+EQDE AL S A++AQ +G + I+P+ + GD + K
Sbjct: 161 HMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDK 220
Query: 272 DNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY 330
D ++ +T E++AKL+PAF K G+VTA N+S + DGA+ V+M + KA++LG++P A
Sbjct: 221 DEYIKPGTTMEKLAKLRPAF-KKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLAT 279
Query: 331 LRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSE 390
+ + DPK + GP AT + LE A +++ DID E +EAFA Q +A ++ +
Sbjct: 280 IVSYGTAGVDPKI-MGYGPVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDL--N 336
Query: 391 WFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIA 450
D+NK N GG+++IGHP +G R+ + R D + GL
Sbjct: 337 I---------------DMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDAKTGLAT 381
Query: 451 ACAAGGQGVGMIIER 465
C GG G +I++R
Sbjct: 382 LCIGGGMGTTLIVKR 396
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 309 bits (795), Expect = e-102
Identities = 131/426 (30%), Positives = 205/426 (48%), Gaps = 35/426 (8%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQE-V 105
V+ VRTP G A++ +L H+L ++ ++G+ K+ ++ + G Q
Sbjct: 2 PEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 61
Query: 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
N+ R A L AGF + TV C S + + I AG V + GVE MS
Sbjct: 62 DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 121
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225
P K N L + T F+ P + E+MG +A+ L
Sbjct: 122 APY-AVPKPERGFPTGN--------LVMYDTTLGWRFV--NPKMQALYGTESMGETAENL 170
Query: 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDNGVRV-ST 279
A + + R+EQD +AL SH A +A E+G D ++P+ V + + +D G R ++
Sbjct: 171 AEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTS 230
Query: 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ 339
E++A L+P F + G+VTA NSS L DGA+A +++++ AK GL+P A +R
Sbjct: 231 LEKLAALRPVF-REGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGV 289
Query: 340 DPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGR 399
P+ + +GP AT + LERAGLS SD+ E++EAFA Q LA L+
Sbjct: 290 PPR-IMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSM-------- 340
Query: 400 SSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGV 459
+ + N GG++++GHP A+G R+ + + R QFGL C GQG+
Sbjct: 341 -------EDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGI 393
Query: 460 GMIIER 465
+++E
Sbjct: 394 AVVVEG 399
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 303 bits (780), Expect = e-100
Identities = 133/436 (30%), Positives = 216/436 (49%), Gaps = 62/436 (14%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
K++V V VRTP G + N A +L ++ + + G++ ID ++ G V+Q
Sbjct: 5 KDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL 64
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N+ R+ A++AG + P++TV C S + + I +G DVV+AGG E MS
Sbjct: 65 GQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQA 124
Query: 167 P--IRHSR--------KMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGE 216
P + +R M +L D L D F +
Sbjct: 125 PYIVPTARFGSKMGNITMVDSMLT--------DGLI-------DAF-----------NQY 158
Query: 217 TMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDK-----TIS 270
MG +A+ +A F+ +R+ QD+ AL S A+ A + + I+P+ V + TI
Sbjct: 159 HMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETID 218
Query: 271 KDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKA 329
KD ++ T E ++KLKPAF K G+VTA N+S + DGA+ ++M++ KA +LG++P A
Sbjct: 219 KDEYPKLGMTFEGLSKLKPAF-KKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLA 277
Query: 330 YLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDS 389
++ + +P+ + GP AT + L++AGLS++DID E +EAFA Q LA +
Sbjct: 278 KIKSYASAGVEPEV-MGTGPIPATRKALKKAGLSINDIDLIEANEAFAAQALAVKNEL-- 334
Query: 390 EWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449
+ D +K N GG++++GHP A+G R+ V + + + GL
Sbjct: 335 QI---------------DSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKVETGLA 379
Query: 450 AACAAGGQGVGMIIER 465
C GGQG+ M++ R
Sbjct: 380 TLCIGGGQGISMVVSR 395
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407 | Back alignment and structure |
|---|
Score = 295 bits (759), Expect = 1e-96
Identities = 121/444 (27%), Positives = 184/444 (41%), Gaps = 75/444 (16%)
Query: 50 VFVDGVRTPF--LLSGTDYANMMAHELARHSLIGILQ-KTGISKDLIDYIVYGTVIQEVK 106
+ +RTP +G+ + L + + + + + LI ++ G V
Sbjct: 10 FIYEAIRTPRGKQKNGS-LTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGD 68
Query: 107 -TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
+I R A L+AG + T + C S + + T + +G D+V+AGGVE MS
Sbjct: 69 QGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSR 128
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225
+P+ F+P G AD +
Sbjct: 129 VPM-------------GSDGGAWATDPETN--YRIGFVP-------------QGIGADLI 160
Query: 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV--GDKTISKDNGVRV-STPE 281
A SR++ D YALRS A A GY ++P++ G + D +R +T E
Sbjct: 161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTME 220
Query: 282 QMAKLKPAF--------------------VKPHGSVTAANSSFLTDGASACVIMTEAKAK 321
+AKLK AF K + T NSS + DGA+ ++ +E K
Sbjct: 221 GLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGK 280
Query: 322 QLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQIL 381
GL P+A + DP +L GP AT +VL+RAGL++ DID +E++EAFA +L
Sbjct: 281 SQGLTPRARIVATATSGSDP-VIMLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVVL 339
Query: 382 ANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVR 441
K ++ K N GG++++GHP ATG +T + L R
Sbjct: 340 KFQKDLN-----------------IPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELER 382
Query: 442 EDGQFGLIAACAAGGQGVGMIIER 465
+ + LI C GG GV IIER
Sbjct: 383 RNARRALITLCIGGGMGVATIIER 406
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 295 bits (757), Expect = 2e-96
Identities = 136/433 (31%), Positives = 209/433 (48%), Gaps = 58/433 (13%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
+IV RT +AN AHEL + +L++ G++ ++ ++ G V+ +
Sbjct: 3 PSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE 62
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N R+AA+ AG + A + C S + + G+ IA G ++VAGG+E MS
Sbjct: 63 GQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 167 PIRHSRKMRSLLLRANKAKTPADRL---KLLATIRPD-----FFIPELPAVAEFSSGETM 218
P H +R ++ K++ T+ D F G M
Sbjct: 123 P--HCAHLRG-----------GVKMGDFKMIDTMIKDGLTDAF------------YGYHM 157
Query: 219 GHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDN 273
G +A+ +A +++SR EQD +A+ S A+ AQ+ G D I+P V GD T+ D
Sbjct: 158 GTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADE 217
Query: 274 GVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLR 332
+R +T + MAKL+PAF G+VTA N+S L DGA+A ++M+EA+A + G++P +
Sbjct: 218 YIRHGATLDSMAKLRPAF-DKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIV 276
Query: 333 DFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWF 392
+ V DPK + GP A+ + LERAG + D+D E +EAFA Q A K + W
Sbjct: 277 SWATVGVDPKV-MGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDL--GW- 332
Query: 393 AKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAAC 452
D + N GG+++IGHP A+G R+ + R + GL C
Sbjct: 333 --------------DPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLC 378
Query: 453 AAGGQGVGMIIER 465
GG GV M IE
Sbjct: 379 IGGGMGVAMCIES 391
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 285 bits (733), Expect = 9e-93
Identities = 121/437 (27%), Positives = 201/437 (45%), Gaps = 58/437 (13%)
Query: 44 KTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ 103
+V V RT A + +L + +L++ ++ + + +++G V+
Sbjct: 3 AGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLA 62
Query: 104 EVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
N R+A++ AG PA + M C S + + + I G +VVAGG+E M
Sbjct: 63 AGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENM 122
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRL---KLLATIRPD-----FFIPELPAVAEFSSG 215
S P H +R+ ++ L +I D F
Sbjct: 123 SKAP--HLAYLRT-----------GVKIGEMPLTDSILCDGLTDAF------------HN 157
Query: 216 ETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTIS 270
MG +A+ +A ++VSR++QD+ A+ S + AQ+ G+ I+P+ V G +
Sbjct: 158 CHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVK 217
Query: 271 KDNGVRV-STPEQMAKLKPAFVK-PHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPK 328
D R S E M+KLKP F+ G+VT AN+S + DGA+A V+M +++A + GL P
Sbjct: 218 TDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPL 277
Query: 329 AYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMD 388
A + + V +P + +GP A Q + +AG SL D+D +E++EAFA A +K +
Sbjct: 278 ARIVSWSQVGVEPSI-MGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELG 336
Query: 389 SEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGL 448
+ K N GG++++GHP A+G R+ V + L R G+
Sbjct: 337 --L---------------NPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSRGV 379
Query: 449 IAACAAGGQGVGMIIER 465
A C GG G+ M ++R
Sbjct: 380 AALCIGGGMGIAMCVQR 396
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 281 bits (722), Expect = 4e-91
Identities = 131/438 (29%), Positives = 204/438 (46%), Gaps = 60/438 (13%)
Query: 42 KDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTV 101
T K +V V RTP + + A +L ++ G ++K GI K+ + G V
Sbjct: 3 SKPTLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNV 62
Query: 102 IQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
+Q + R+A L AG TP T+ C S + I + G DV+VAGG+E
Sbjct: 63 LQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGME 122
Query: 162 FMSDIPIRHSRKMRSLLLRANKAKTPADRL---KLLATIRPD-----FFIPELPAVAEFS 213
MS++P + ++ R + KL I D +
Sbjct: 123 SMSNVP--Y------VMNRGST------PYGGVKLEDLIVKDGLTDVY------------ 156
Query: 214 SGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV-----GDK 267
+ MG A+ A ++R EQD YA+ S+T ++ A E G + ++P+ V D
Sbjct: 157 NKIHMGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDV 216
Query: 268 TISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKP 327
+ +D + ++ KLK F K +G+VTAAN+S L DGA+A V+MT AK+L + P
Sbjct: 217 VVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTP 276
Query: 328 KAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAM 387
A + F + +P D + P YA VL+ GL DI WEV+EAF+ +LAN+K +
Sbjct: 277 LARIVAFADAAVEPID-FPIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKML 335
Query: 388 DSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFG 447
+ D K N GG++S+GHP +G R+ H + L + G++G
Sbjct: 336 E--I---------------DPQKVNINGGAVSLGHPIGMSGARIVGHLTHAL--KQGEYG 376
Query: 448 LIAACAAGGQGVGMIIER 465
L + C GG M+I++
Sbjct: 377 LASICNGGGGASAMLIQK 394
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.3 bits (145), Expect = 8e-10
Identities = 62/431 (14%), Positives = 124/431 (28%), Gaps = 140/431 (32%)
Query: 5 LTKKIIKNALNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGKNIV--FVDGVRTPFLLS 62
L+K+ I + + ++ + K + +V FV+ V
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWT-----------LLSK-QEEMVQKFVEEVLRI---- 89
Query: 63 GTDYANMMAHELARHSLIGILQKTGISKDLIDYI--VYGTVIQEVKTSNIGRE---AALS 117
+Y + + Q + +++ I+ +Y Q N+ R L
Sbjct: 90 --NY-KFLMSPIKTEQ----RQPSMMTRMYIEQRDRLYNDN-QVFAKYNVSRLQPYLKLR 141
Query: 118 AGFSDKTPAHTVT---MACISSNQGITTGIG---LIAAGAYDVVV----AGGVEFMSDIP 167
+ PA V + G G + V + +++
Sbjct: 142 QALLELRPAKNVLIDGVL----------GSGKTWVALDVCLSYKVQCKMDFKIFWLN--- 188
Query: 168 IRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAA 227
+++ ++L KLL I P++ + ++ SS +
Sbjct: 189 LKNCNSPETVLEMLQ---------KLLYQIDPNW-----TSRSDHSSNIKL--------- 225
Query: 228 AFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISK--DNGVRVSTPEQMAK 285
R + LR L + E L +L V + + ++
Sbjct: 226 -----RIHSIQAELR-RLLKSKPYENCLL--VLL-NVQNAKAWNAFNLSCKI-------- 268
Query: 286 LKPAFVKPHGSVTAANSSFLTDGASACVI-----------MTEAKAKQLGLKPKAYLRDF 334
L +T +TD SA +T + K L LK
Sbjct: 269 L----------LTTRFKQ-VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK-------- 309
Query: 335 VYVSQDPKDQLLLGPAYAT---PQVLERAGLSLSD-IDAWE-----VHEAFAGQILANLK 385
Y+ P+D L P P+ L S+ D + W+ + I ++L
Sbjct: 310 -YLDCRPQD-L---PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 386 AMDSEWFAKNY 396
++ + K +
Sbjct: 365 VLEPAEYRKMF 375
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 8e-05
Identities = 37/272 (13%), Positives = 75/272 (27%), Gaps = 81/272 (29%)
Query: 161 EFMSDIPIRH-SRKMRSLLLRAN-----KAKTPADRLKLLATIRPDFFIPELPAVAEFSS 214
F+ + + +S+L + +K L F+ S
Sbjct: 28 AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL------FWTLL-------SK 74
Query: 215 GETMGHSADRLAAAFKVSRKEQDEY-----ALRSHTLAQQAQEKGYLTDILPIQVGDKTI 269
E + F V + Y +++ + Y+ + ++
Sbjct: 75 QE-------EMVQKF-VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF 126
Query: 270 SKDNGVRVSTPEQMAKLKPAF--VKP------HG------SVTAANS----------SF- 304
+K N VS + KL+ A ++P G + A + F
Sbjct: 127 AKYN---VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183
Query: 305 ---LTDG----ASACVIMTEAKAKQLGLKPKAY------LRDFVYVSQDPKDQLLLGPAY 351
L + M + Q+ + ++ ++ Q +LL Y
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243
Query: 352 ATPQVLERAGLSLSDIDAWEVHEAFAG--QIL 381
L L L ++ + AF +IL
Sbjct: 244 --ENCL----LVLLNVQNAKAWNAFNLSCKIL 269
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 2e-07
Identities = 32/285 (11%), Positives = 78/285 (27%), Gaps = 52/285 (18%)
Query: 116 LSAG-----FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRH 170
+SA S P T AC +S + + G+ I +G + + GG + +
Sbjct: 1084 MSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFE 1143
Query: 171 SRKMRSLLLRANKAKTPADRLKLLATIRP-----DFFIPELPAVAEFSSG----ETMGHS 221
M++ + + + + RP + F+ A+ +G +
Sbjct: 1144 FGNMKATSNTLEEFEHGRTPAE--MS-RPATTTRNGFM-----EAQ-GAGIQIIMQADLA 1194
Query: 222 ADRLAA-------------AFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKT 268
S + L + + K ++ +
Sbjct: 1195 LKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSS-VKYASPNLNMKYRKRQL 1253
Query: 269 ISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPK 328
++++ ++ ++ +K + I EA+++ +
Sbjct: 1254 VTREAQIKDWVENEL-----EALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQ-- 1306
Query: 329 AYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVH 373
+ + K L GL++ D+ H
Sbjct: 1307 -----QQWGNDFYKRD---PRIAPLRGALATYGLTIDDLGVASFH 1343
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Length = 347 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 73 ELARHSLIGILQKTGISKDLIDYIVYGTVI-QEVKTSNIGREAALSAGFSDKTPAHTVTM 131
+L ++ L K + K+ ID + G ++ Q V + + R + P +
Sbjct: 57 KLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQNVTANYVARHLKI--------PFLCLFG 108
Query: 132 ACISSNQGITTGIGLIAAGAYDVVVAGG 159
AC +S + I LI G +A
Sbjct: 109 ACSTSMESIAISSALIDGGFAKRALAAT 136
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 472 | |||
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.98 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.98 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.98 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.98 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.98 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.97 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.97 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.97 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.97 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.97 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.97 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.97 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.97 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.96 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.96 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.96 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.96 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.96 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.95 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.94 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.94 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.94 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.94 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.94 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.94 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.93 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.93 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.93 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.93 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.93 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.93 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.92 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.92 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.92 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.91 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.91 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.9 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.9 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.9 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.89 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.89 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.87 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.87 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.87 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.87 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.87 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.87 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.87 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.86 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.86 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.86 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.84 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.84 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.83 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.83 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.82 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.82 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.77 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.77 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.75 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.71 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 87.82 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 85.7 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 84.87 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 84.22 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 83.64 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 83.35 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 82.89 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 82.85 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 82.79 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 82.6 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 82.19 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 81.31 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 81.22 |
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-65 Score=525.48 Aligned_cols=377 Identities=36% Similarity=0.563 Sum_probs=333.3
Q ss_pred CCceEEEecccccccccC-ccCCCCCHHHHHHHHHHHHHHHc-CCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSG-TDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSD 122 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~-~~~~~~~~~~La~~A~~~Al~~a-gi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~ 122 (472)
|++++|||++||||+++. +.+.++++.+|+.+|+++||+|+ |+++++||.+++|+..+++. .+++++.++..+|++.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 568999999999999986 67778999999999999999999 99999999999999888765 6789999999999976
Q ss_pred CCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCC
Q psy1213 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFF 202 (472)
Q Consensus 123 ~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (472)
.+|+++|+++|+|++++|++|++.|++|++|++||+|+|+||+.|+.... + ++++
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~---------------~-----~~~~----- 135 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGV---------------D-----FHPG----- 135 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTB---------------C-----CCTT-----
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCcccccc---------------C-----cCcc-----
Confidence 79999999999999999999999999999999999999999988764110 0 0010
Q ss_pred CCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc-----ceeeccCCCc
Q psy1213 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD-----KTISKDNGVR 276 (472)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~-----~~~~~de~~~ 276 (472)
....+++. ...|++.+++|+++||+|||++++|++++|++|.+|+++|+|+ +++|+.... ..++.|+.+|
T Consensus 136 ---~~~~~~~~-~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r 211 (387)
T 3goa_A 136 ---LSRNVAKA-AGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIR 211 (387)
T ss_dssp ---CC--------CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCC
T ss_pred ---cccccccc-cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccC
Confidence 01111222 3679999999999999999999999999999999999999887 588986621 3578899998
Q ss_pred c-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHH
Q psy1213 277 V-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQ 355 (472)
Q Consensus 277 ~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~ 355 (472)
+ +|+|+|++++|+|..++|++|.+|||+++||++++||++++.|++++.+|+++|+|++...++|.. +..++..++++
T Consensus 212 ~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~-~~~~~~~a~~~ 290 (387)
T 3goa_A 212 PETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSI-MGYGPVPASKL 290 (387)
T ss_dssp TTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTS-TTCTHHHHHHH
T ss_pred CCCCHHHHhcCCCcccCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCc-chHHHHHHHHH
Confidence 6 999999999999942288999999999999999999999999999999999999999998877654 56788999999
Q ss_pred HHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHH
Q psy1213 356 VLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHA 435 (472)
Q Consensus 356 Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~ 435 (472)
+|++||++++|||++|+||+|+++++..++.|| ||+++. .| +|++||++++|||+||||+++++++
T Consensus 291 al~~agl~~~did~ve~h~~f~~~~~~~~~~lg---~~~~~~--------~~---vn~~gg~~~~GH~~gasG~~~~~~~ 356 (387)
T 3goa_A 291 ALKKAGLSASDIDVFEMNEAFAAQILPCIKDLG---LMEQID--------EK---INLNGGAIALGHPLGCSGARISTTL 356 (387)
T ss_dssp HHHHHTCCGGGCSEEEECCSBHHHHHHHHHHTT---CGGGHH--------HH---BSTTCCHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHcCEEEEeCcchHHHHHHHHHhC---CCcCCC--------cc---CCCCCchhcccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 888653 35 9999999999999999999999999
Q ss_pred HHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 436 ANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 436 v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++||+++.+++||++.|++||+|.++|||+.
T Consensus 357 ~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~~ 387 (387)
T 3goa_A 357 INLMERKDAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_dssp HHHHHHTTCSEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHhcCCCEEEEEeccCcCceEEEEEEeC
Confidence 9999999999999999999999999999974
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-65 Score=524.49 Aligned_cols=391 Identities=32% Similarity=0.499 Sum_probs=329.6
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~ 124 (472)
|++++|||++||||+++++.++++++.+|+.+|+++||+|+|+++++||.|++|+..+++. .++++..++..+|++..+
T Consensus 1 m~~v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 80 (401)
T 1ulq_A 1 MPEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV 80 (401)
T ss_dssp --CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred CCceEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence 3579999999999999877778899999999999999999999999999999999887764 578999999999996568
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+|+++||.+|+++|++|++|++||+|+|.++..|+..... + +.. . .+. ....+... . +
T Consensus 81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~-~-----~~~-~-~~~-~~~~~~~~-~-~-- 147 (401)
T 1ulq_A 81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKP-E-----RGF-P-TGN-LVMYDTTL-G-W-- 147 (401)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCC-C-----SSS-C-CSC-EEEEETTS-S-C--
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccc-c-----ccc-c-cCc-ccccchhh-h-c--
Confidence 9999999999999999999999999999999999999999877632100 0 000 0 000 00000000 0 0
Q ss_pred Ccc-ccc-ccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-c---ceeeccCCCcc
Q psy1213 205 ELP-AVA-EFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-D---KTISKDNGVRV 277 (472)
Q Consensus 205 ~~~-~~~-~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~---~~~~~de~~~~ 277 (472)
+.+ .+. +......|++.+++|+++||+|||++++|++++|++|..+++.|+|+ ++.|+... + ..++.|+.+|+
T Consensus 148 ~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~ 227 (401)
T 1ulq_A 148 RFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRR 227 (401)
T ss_dssp CSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCT
T ss_pred cccccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCC
Confidence 000 000 11113458999999999999999999999999999999999999987 47887541 1 23778999986
Q ss_pred -CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHH
Q psy1213 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQV 356 (472)
Q Consensus 278 -~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~A 356 (472)
+|+|+|+++||+|. ++|++|++|||+++|||+++||+|++.|++++.+|+++|+|++..+++|.. +..++..++++|
T Consensus 228 ~~t~e~~~~~rpif~-~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~~~~~~~a~~~a 305 (401)
T 1ulq_A 228 DTSLEKLAALRPVFR-EGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRI-MGIGPVPATRKA 305 (401)
T ss_dssp TCCHHHHHHSCBSSS-TTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHH
T ss_pred CCCHHHHhhCCCccC-CCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccc-cchhHHHHHHHH
Confidence 89999999999984 478999999999999999999999999999999999999999998877653 567889999999
Q ss_pred HHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
|++||++++|||++|+||+|+++++..+|+|| ||+++ .| +|++||++++|||+||||++++++++
T Consensus 306 l~~Agl~~~dId~ie~heafa~~~l~~~~~lg---~~~~~---------~~---vn~~Gg~~a~GHp~gAsG~~~~~~~~ 370 (401)
T 1ulq_A 306 LERAGLSFSDLGLIELNEAFAAQALAVLREWS---LSMED---------QR---LNPNGGAIALGHPLGASGARILTTLV 370 (401)
T ss_dssp HHHTTCCGGGCSEEEECCSBHHHHHHHHHHHT---CCTTC---------TT---BSTTCCHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHHHcCEEEEecchHHHHHHHHHHcC---CCCCC---------Cc---cCCCCcccccCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999 77642 24 99999999999999999999999999
Q ss_pred HHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 437 NRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 437 ~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+|||++..+++|+++|++||++.++||++.
T Consensus 371 ~~L~~~~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 371 HEMRRRKVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp HHHHHTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHhhcCCCEEEEEeecCCcccEEEEEEeC
Confidence 999999999999999999999999999984
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-65 Score=524.64 Aligned_cols=382 Identities=29% Similarity=0.438 Sum_probs=328.3
Q ss_pred cccccccCCceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHcC----CCcCccCEEEEEeecCCCCCChHHHH
Q psy1213 39 KSVKDKTGKNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKTG----ISKDLIDYIVYGTVIQEVKTSNIGRE 113 (472)
Q Consensus 39 ~~~~~~~~~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~ag----i~~~~Id~vi~g~~~~~~~~~~~a~~ 113 (472)
|..+.++|+++|||+++||||+++ ++.++++++.+|+.+|+++||+|+| +++++||.+++|+..+++..++++..
T Consensus 2 ~~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~ 81 (393)
T 1afw_A 2 NSLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRA 81 (393)
T ss_dssp TTTTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHH
T ss_pred cchhhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHH
Confidence 667888899999999999999997 4777789999999999999999999 99999999999998876656778999
Q ss_pred HHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhh
Q psy1213 114 AALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKL 193 (472)
Q Consensus 114 ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (472)
++..+|++..+|+++|+++|+|++++|.+|+++|++|++|++||+|+|.++..|+..... + . ...
T Consensus 82 va~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~-------~-~--~~~----- 146 (393)
T 1afw_A 82 ACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPL-------G-M--ISS----- 146 (393)
T ss_dssp HHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTT-------C-S--CCC-----
T ss_pred HHHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCccccccc-------c-c--ccc-----
Confidence 999999965789999999999999999999999999999999999999987655421100 0 0 000
Q ss_pred hhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-cceeec
Q psy1213 194 LATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-DKTISK 271 (472)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~~~~~~ 271 (472)
+.+....+ .+.....|++++++|+++||+|||++++|++++|++|.+++++|+|+ |+.|+... ++.++.
T Consensus 147 -~~~~~~g~--------~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~ 217 (393)
T 1afw_A 147 -EELQKNRE--------AKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQS 217 (393)
T ss_dssp -HHHHHCTT--------GGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECS
T ss_pred -hhhhhccc--------ccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceecc
Confidence 00000000 01112468999999999999999999999999999999999999996 58898641 124677
Q ss_pred cCCCcc-CCHHHHhcCCCcccCCC-CceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccH
Q psy1213 272 DNGVRV-STPEQMAKLKPAFVKPH-GSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGP 349 (472)
Q Consensus 272 de~~~~-~t~~~~~~~~p~~~~~~-g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~ 349 (472)
|+.+|. +|+|+|+++||+|. ++ |++|.+|||+++|||+++||+|++.|++++.+|+++|+|++..+++|.. +..++
T Consensus 218 d~~~r~~~t~e~~~~~rpvf~-~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~~~~~ 295 (393)
T 1afw_A 218 DEGPRPNVTAESLSSIRPAFI-KDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEI-MGVGP 295 (393)
T ss_dssp CSSCCSCCCHHHHHHCCBSCC----CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGG-GGGHH
T ss_pred ccccCCCCCHHHHhcCCCccc-CCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhh-cchhH
Confidence 888774 89999999999983 34 8999999999999999999999999999999999999999998877653 56678
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~ 429 (472)
..++++||++||++++|||++|+||+|+++++..++.|| ||+ .++|++||++++|||+||||+
T Consensus 296 ~~a~~~al~~Agl~~~dId~ve~h~~ft~~~l~~~~~lg---~~~--------------~~vn~~Gg~~a~GHp~gAsG~ 358 (393)
T 1afw_A 296 AYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLG---IDL--------------NKVNPRGGAIALGHPLGCTGA 358 (393)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHT---CCG--------------GGBSTTCCHHHHCBCTTTHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCHHHHHHHHHHhC---CCC--------------cCcCCCCChhhcCCchhhHHH
Confidence 999999999999999999999999999999999999999 433 359999999999999999999
Q ss_pred HHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 430 RLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 430 ~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++++++++|||++.+ ||+++|++||++.+++||+
T Consensus 359 ~~~~~~~~~L~~~~~--gl~~~c~ggg~g~a~~~~~ 392 (393)
T 1afw_A 359 RQVATILRELKKDQI--GVVSMCIGTGMGAAAIFIK 392 (393)
T ss_dssp HHHHHHHHHSCTTCE--EEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHHHhhcCC--cEEEEeecccceEEEEEEe
Confidence 999999999998876 9999999999999999997
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-64 Score=519.51 Aligned_cols=385 Identities=32% Similarity=0.518 Sum_probs=334.6
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
|+++|||+++||||+++++.++++++.+|+.+|+++||+++|+++++||.+++++..+++..+++++.++..+|++..+|
T Consensus 6 m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p 85 (396)
T 4dd5_A 6 MREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKP 85 (396)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCce
Confidence 67999999999999998777788999999999999999999999999999999999888778899999999999976799
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++|+++|+|++++|++|+++|++|.+|++||+|+|++|+.|+...... +.. ..+. ....+.+.
T Consensus 86 ~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~------~~~--~~~~-~~~~~~~~------- 149 (396)
T 4dd5_A 86 AMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSAR------YGA--RMGD-AAFVDSMI------- 149 (396)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTT------TCC--CSSC-CCCEEHHH-------
T ss_pred EEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccc------ccc--ccCc-ccccchhh-------
Confidence 9999999999999999999999999999999999999999876532110 000 0000 00000000
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc----ceeeccCCCcc-CC
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD----KTISKDNGVRV-ST 279 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~----~~~~~de~~~~-~t 279 (472)
.+.+.++.....|++.+++|+++||+|||++++|++++|++|.+|+++|+|+ |+.|+.... ..++.|+.+|+ +|
T Consensus 150 ~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t 229 (396)
T 4dd5_A 150 KDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTT 229 (396)
T ss_dssp HHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCC
T ss_pred hcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCC
Confidence 0111233334679999999999999999999999999999999999999997 589987622 14778898886 99
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLER 359 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~ 359 (472)
+|+|++++|+| +|+|++|.+|||+++|||+++||++++.|++++.+|+++|+|++...+.|.. +..++..+++++|++
T Consensus 230 ~e~l~~~~~v~-~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~-~~~~~~~a~~~al~~ 307 (396)
T 4dd5_A 230 MEKLAKLRPAF-KKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKI-MGYGPVPATKKALEA 307 (396)
T ss_dssp HHHHHHCCBSS-STTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHHH
T ss_pred HHHHhhCCCcc-CCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCc-ccHHHHHHHHHHHHH
Confidence 99999999999 5789999999999999999999999999999999999999999998776653 566789999999999
Q ss_pred cCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHH
Q psy1213 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 360 Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
+|++++|||++|+||+|++..+..+|.|| || ..++|++||++++|||+||+|+++++++++||
T Consensus 308 Agl~~~dId~ve~~d~f~~~~~~~~~~lg---~~--------------~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L 370 (396)
T 4dd5_A 308 ANMTIEDIDLVEANEAFAAQSVAVIRDLN---ID--------------MNKVNVNGGAIAIGHPIGCSGARILTTLLYEM 370 (396)
T ss_dssp HTCCGGGCSEEEECCSBHHHHHHHHHHHT---CC--------------TTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHcCEEEecChHHHHHHHHHHHhC---CC--------------CCccCCCCchhhccCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 43 33499999999999999999999999999999
Q ss_pred hhccCCcchhhhhccCcceeEEEEEe
Q psy1213 440 VREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 440 ~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+++.+++||+++|++||+|.++|||+
T Consensus 371 ~~~~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 371 KRRDAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp HHHTCSEEEEEEEETTTEEEEEEEEC
T ss_pred HhcCCCeEEEEEcccCCceeEEEEeC
Confidence 99999999999999999999999986
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-65 Score=527.15 Aligned_cols=381 Identities=33% Similarity=0.499 Sum_probs=328.0
Q ss_pred cccccCCceEEEecccccccccC-ccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHc
Q psy1213 41 VKDKTGKNIVFVDGVRTPFLLSG-TDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSA 118 (472)
Q Consensus 41 ~~~~~~~~~~Ivg~~~t~~~~~~-~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~l 118 (472)
..++.|+++|||+++||||+++. +.+.++++.+|+.+|+++||+++|+++++||.+++|+..+++. .++++..++..+
T Consensus 24 ~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~l 103 (442)
T 2wu9_A 24 RTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYA 103 (442)
T ss_dssp --CCGGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHT
T ss_pred cchhcCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHc
Confidence 33455678999999999999975 6677899999999999999999999999999999998776432 356788999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|++..+|+++|+++|+|+++||.+|+++|++|++|++||+|+|.++..|+..... ... .+
T Consensus 104 Gl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~------------~~~-------~~- 163 (442)
T 2wu9_A 104 GFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGS------------VNP-------AV- 163 (442)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSC------------CCG-------GG-
T ss_pred CCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccc------------cch-------hh-
Confidence 9965789999999999999999999999999999999999999998876531100 000 00
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec----------cc
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG----------DK 267 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~----------~~ 267 (472)
+ ... .++.....|++.+++|+++||+|||++++|++++|++|..+++.|+|+ ++.|+... ..
T Consensus 164 ---~---~~~-~~~~~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~ 236 (442)
T 2wu9_A 164 ---K---KFA-QAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPI 236 (442)
T ss_dssp ---G---GCH-HHHHTTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEE
T ss_pred ---h---hcc-ccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCce
Confidence 0 000 011223578999999999999999999999999999999999999887 47887641 12
Q ss_pred eeeccCCCcc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccccc
Q psy1213 268 TISKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLL 346 (472)
Q Consensus 268 ~~~~de~~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~ 346 (472)
.++.||.+|+ +|+|+|+++||+|. ++|++|.+|||+++|||+++||+|++.|++++.+|+++|+|++...++|.. +.
T Consensus 237 ~~~~De~~r~~~t~e~~~~~rpvfd-~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~-~~ 314 (442)
T 2wu9_A 237 TVSVDDGIRPTTTLASLGKLKPVFK-KDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAI-MG 314 (442)
T ss_dssp EECSCTTCCTTCCHHHHHTSCCSSC-TTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGG-GG
T ss_pred eeecccCcCCCCCHHHHhcCCCccC-CCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchh-cc
Confidence 4788999985 99999999999984 578999999999999999999999999999999999999999998876653 56
Q ss_pred ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCC
Q psy1213 347 LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAA 426 (472)
Q Consensus 347 ~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~ga 426 (472)
.++..++++||++||++++|||+||+||+|+++++..++.|| || .++||++||++++|||+||
T Consensus 315 ~~~~~A~~~Al~~AGl~~~DId~iE~h~aft~~~l~~~~~lG---~~--------------~~~vN~~GG~~a~GHp~GA 377 (442)
T 2wu9_A 315 IGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLG---LD--------------PEKINVNGGAMAIGHPLGA 377 (442)
T ss_dssp GHHHHHHHHHHHHTTCCGGGCCEEEECCSBHHHHHHHHHHHT---CC--------------GGGBSTTCCHHHHCCCHHH
T ss_pred hHHHHHHHHHHHHcCCCHHHCCEEEEeCCChHHHHHHHHHhC---CC--------------CCCcCCCccHhhcCCchhH
Confidence 678899999999999999999999999999999999999999 43 3359999999999999999
Q ss_pred cHHHHHHHHHHHHhhcc--CCcchhhhhccCcceeEEEEEeCC
Q psy1213 427 TGVRLTVHAANRLVRED--GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 427 sG~~~v~e~v~qL~~~~--g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
||+++++++++|||++. .+++|+++|++||+++++||++.+
T Consensus 378 sG~~~~~~~v~~Lr~~~~~~~~glas~~~GGG~~~a~v~~~~~ 420 (442)
T 2wu9_A 378 TGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGD 420 (442)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEEEETTTEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHhccCCCCCEEEEEeecccchheEEEEEecc
Confidence 99999999999999998 899999889999999999999864
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-64 Score=522.09 Aligned_cols=389 Identities=31% Similarity=0.492 Sum_probs=321.9
Q ss_pred cCCCCccccccccc-----CCceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCC
Q psy1213 32 HNVYSPRKSVKDKT-----GKNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEV 105 (472)
Q Consensus 32 ~p~~~~~~~~~~~~-----~~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~ 105 (472)
-|++.++|+++++. ++++|||++++|||+++ ++.++++++.+|+.+|+++||+|+|+++++||.|++|+..+++
T Consensus 10 ~P~~~~~n~~~~~~~~~~~~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~ 89 (418)
T 2iik_A 10 GVDLGTENLYFQSMAPQASAADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPG 89 (418)
T ss_dssp -----------------CCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBG
T ss_pred CCCccccHHHHHHHhhhccCCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCcc
Confidence 36677777666643 45899999999999985 3456789999999999999999999999999999999888766
Q ss_pred CCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCC
Q psy1213 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAK 185 (472)
Q Consensus 106 ~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 185 (472)
..+++++.++..+|++..+|+++|+++|+|+++||.+|+++|++|++|++||+|+|.++..|+.... +
T Consensus 90 ~~~~~a~~~a~~lGl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~----------~-- 157 (418)
T 2iik_A 90 AGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPG----------N-- 157 (418)
T ss_dssp GGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC---------------C--
T ss_pred ccccHHHHHHHHcCCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCc----------c--
Confidence 5567888899999996579999999999999999999999999999999999999999987653100 0
Q ss_pred CchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCcccee
Q psy1213 186 TPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQV 264 (472)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~ 264 (472)
. .+. .+.+ +...++ ...|++.+++++++||+|||++++|++++|++|..+++.|+|+ ++.|...
T Consensus 158 ~-------~~~----~~~~--~~~~~~--~~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~ 222 (418)
T 2iik_A 158 I-------TSR----LMEK--EKARDC--LIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTT 222 (418)
T ss_dssp C-------CTT----GGGC--HHHHGG--GSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEE
T ss_pred c-------chh----hhcc--cccccc--cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeee
Confidence 0 000 0000 000111 1458899999999999999999999999999999999888886 4777653
Q ss_pred c---c------ceeeccCCCcc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEe
Q psy1213 265 G---D------KTISKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDF 334 (472)
Q Consensus 265 ~---~------~~~~~de~~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~ 334 (472)
. + ..++.|+.+|+ +|+|+|++++|+|. +++|+|.+||++++|||+++||+|++.|++++.+|+++|.|+
T Consensus 223 ~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd-~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~ 301 (418)
T 2iik_A 223 TVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFK-KDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSY 301 (418)
T ss_dssp EEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSS-TTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEE
T ss_pred ccccccCcccceeeecccCcCCCCCHHHHhhCCCccc-CCCceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEE
Confidence 1 1 13677888887 89999999999994 457999999999999999999999999999999999999999
Q ss_pred EEeccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC
Q psy1213 335 VYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW 414 (472)
Q Consensus 335 ~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~ 414 (472)
+....+|.. +..++..++++||++||++++|||++|+||+|++++++++++|| || ..+||++
T Consensus 302 ~~~~~~p~~-~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~~~~~~~lg---~~--------------~~~vN~~ 363 (418)
T 2iik_A 302 AVVGVPPDI-MGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLR---LP--------------PEKVNPL 363 (418)
T ss_dssp EEEECCGGG-GGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHHHHHHHHHT---CC--------------GGGBCTT
T ss_pred EeccCCchh-cchhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHHHHHHHHcC---CC--------------ccccCCC
Confidence 988766653 56678889999999999999999999999999999999999999 43 3349999
Q ss_pred CCCccccCCCCCcHHHHHHHHHHHHhhccCC-cchhhhhccCcceeEEEEEeC
Q psy1213 415 GGSLSIGHPFAATGVRLTVHAANRLVREDGQ-FGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 415 GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~-~gl~~~~~~GG~~~a~~l~~~ 466 (472)
||++++|||+||||+++++++++||++++++ +||+++|++||+|.++|||+.
T Consensus 364 GG~~a~GHp~GAsG~~~~~~~~~~L~~~~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 364 GGAVALGHPLGCTGARQVITLLNELKRRGKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp CCHHHHCCCHHHHHHHHHHHHHHHHHHHTSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred CCeeeecCChhhhHHHHHHHHHHHHHhcCCCeeeEEEEeeccchhheEEEecc
Confidence 9999999999999999999999999999887 999999999999999999985
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-64 Score=513.73 Aligned_cols=386 Identities=38% Similarity=0.549 Sum_probs=334.7
Q ss_pred cCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~ 124 (472)
.|++++|||++||||+++++.++++++.+|+.+|+++||+|+|+++++||.+++++..+++..+++++.++..+|++..+
T Consensus 3 ~m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~ 82 (394)
T 3ss6_A 3 AMHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTV 82 (394)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTC
T ss_pred CCceEEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCc
Confidence 36799999999999999877778899999999999999999999999999999999888777788999999999997679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+|++++|++|+++|++|.+|++||+|+|++++.|+..... + +... .+. ....+..
T Consensus 83 p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~-~-----~~~~--~~~-~~~~~~~------- 146 (394)
T 3ss6_A 83 TGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQH-R-----WGQR--LQH-GEIRDTV------- 146 (394)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESST-T-----TCCC--SSC-CCCEEHH-------
T ss_pred eEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCccccccc-c-----cccc--cCC-ccccccc-------
Confidence 9999999999999999999999999999999999999999887643210 0 0000 000 0000000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceeccc----eeeccCCCcc-C
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGDK----TISKDNGVRV-S 278 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~~----~~~~de~~~~-~ 278 (472)
.+.++++.....|++.+++|+++||+|||++++|++++|++|..|+++|+|+ ++.|+....+ .++.|+.+|+ +
T Consensus 147 -~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~ 225 (394)
T 3ss6_A 147 -WEVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADI 225 (394)
T ss_dssp -HHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTC
T ss_pred -ccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCC
Confidence 0111233334679999999999999999999999999999999999999997 5899876211 4678888885 9
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~ 358 (472)
|+|++++++|+| .|+|++|.+|||+++||++++||++++.|++++.+|+++|+|++....+|.. +..++..+++++|+
T Consensus 226 t~e~~~~~~pvf-~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~-~~~~~~~a~~~al~ 303 (394)
T 3ss6_A 226 TAEKLAGLKPAF-RKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKI-MGIGPAPAIRKGLE 303 (394)
T ss_dssp CHHHHHTCCBSS-STTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHH
T ss_pred CHHHHhhCCCcc-CCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCcc-chHHHHHHHHHHHH
Confidence 999999999998 4689999999999999999999999999999999999999999998766653 56678999999999
Q ss_pred HcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANR 438 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~q 438 (472)
++|++++|||++|+||+|++..+...+.|| | +.+++|++||++++|||.||||+++++++++|
T Consensus 304 ~agl~~~dId~ve~~d~fa~~~~~~~~~lg---~--------------~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~ 366 (394)
T 3ss6_A 304 KVDWSLEDADLLEINEAFAAQYLAVEKELD---L--------------DREKVNVNGSGVGLGHPIGCTGARITVSLIHE 366 (394)
T ss_dssp HHTCCGGGCSEEEECCSBHHHHHHHHHHHT---C--------------CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHcCEEEeCCchHHHHHHHHHHhC---C--------------CCCCCCCCcchHhhCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 3 44459999999999999999999999999999
Q ss_pred HhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 439 LVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 439 L~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|+++.++++|++.|++||+|.++|||+.
T Consensus 367 L~~~~~~~gl~~~c~ggG~g~a~~~e~~ 394 (394)
T 3ss6_A 367 LKRRGLEKGIASLCVGGGIGVALFIEAL 394 (394)
T ss_dssp HHHHTCCEEEEEEEETTTEEEEEEEEEC
T ss_pred HHhcCCCEEEEEEccCcCceeEEEEEcC
Confidence 9999999999999999999999999974
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-63 Score=511.72 Aligned_cols=385 Identities=34% Similarity=0.524 Sum_probs=330.1
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
|++++|||++||||+++.+.+.++++.+|+.+|+++||+|+|+++++||.+++|+..+++..++++.+++..+|++..+|
T Consensus 2 m~~v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 81 (392)
T 2vu1_A 2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT 81 (392)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred CCCEEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce
Confidence 56899999999999998777778999999999999999999999999999999998877666789999999999963489
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++++++|+|++.||++|++.|++|++|++||+|+|+++..|+. .. .+ +.. ..+. ...++...
T Consensus 82 ~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~-~~-~~-----~~~--~~~~-~~~~~~~~------- 144 (392)
T 2vu1_A 82 AWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHC-AH-LR-----GGV--KMGD-FKMIDTMI------- 144 (392)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEE-EC-CT-----TCC--CSSC-EEEEEHHH-------
T ss_pred EEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccc-cc-cc-----ccc--ccCc-ccccchhh-------
Confidence 99999999999999999999999999999999999999887752 00 00 000 0000 00000000
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec----cceeeccCCCcc-CC
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG----DKTISKDNGVRV-ST 279 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~----~~~~~~de~~~~-~t 279 (472)
...+.++.....|++++++|+++||+|+|++++|++++|++|.++++.|+|+ ++.|.... .++|+.||.+|+ +|
T Consensus 145 ~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t 224 (392)
T 2vu1_A 145 KDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGAT 224 (392)
T ss_dssp HHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCC
T ss_pred hcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCC
Confidence 0000111123469999999999999999999999999999999999999987 57887652 258999999986 89
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLER 359 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~ 359 (472)
+|+|++++|+| .++|++|++|||+++|||+++||++++.|++++.+|+++|+|++.....|.. +..++..++++||++
T Consensus 225 ~e~~~~~~~v~-~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~~~~~~~a~~~al~~ 302 (392)
T 2vu1_A 225 LDSMAKLRPAF-DKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKV-MGTGPIPASRKALER 302 (392)
T ss_dssp HHHHHTCCCSS-CTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHHH
T ss_pred HHHHhcCCCcc-CCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhh-cchhHHHHHHHHHHH
Confidence 99999999998 4679999999999999999999999999999999999999999998776643 567889999999999
Q ss_pred cCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHH
Q psy1213 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 360 Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
+|++++|||+||+||+|+++.+..++.|| | +.+++|++||++++|||+||+|+++++++++||
T Consensus 303 agl~~~dId~ie~~d~f~~~~l~~~~~lg---~--------------~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L 365 (392)
T 2vu1_A 303 AGWKIGDLDLVEANEAFAAQACAVNKDLG---W--------------DPSIVNVNGGAIAIGHPIGASGARILNTLLFEM 365 (392)
T ss_dssp HTCCGGGCSEEEECCSBHHHHHHHHHHHC---C--------------CGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHH
T ss_pred cCCCHHHcCEEEeccccHHHHHHHHHHcC---C--------------CcccCCCCccHhhhCCChhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 3 334599999999999999999999999999999
Q ss_pred hhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 440 VREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 440 ~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++.++++|+++|++||++.++|||+.
T Consensus 366 ~~~~~~~gl~~~~~ggG~~~a~~~e~~ 392 (392)
T 2vu1_A 366 KRRGARKGLATLCIGGGMGVAMCIESL 392 (392)
T ss_dssp HHHTCSEEEEEEEETTTEEEEEEEECC
T ss_pred hccCCCEEEEEEecccchheEEEEEeC
Confidence 999999999999999999999999973
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-63 Score=509.40 Aligned_cols=386 Identities=33% Similarity=0.524 Sum_probs=333.7
Q ss_pred cCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~ 124 (472)
+|+++|||+++||||+++++.++++++.+|+.+|+++||+|+|+++++||.++++++.+++..+++++.++..+|++..+
T Consensus 3 ~m~~v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~ 82 (395)
T 4e1l_A 3 AMKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSV 82 (395)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTS
T ss_pred CCCeEEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCc
Confidence 47799999999999999877778899999999999999999999999999999999888777789999999999997679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+|++++|++|+++|++|.+|++||+|+|++|+.|+..... + +... .+. ....+.+.
T Consensus 83 p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~-~-----~~~~--~~~-~~~~~~~~------ 147 (395)
T 4e1l_A 83 PSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTA-R-----FGSK--MGN-ITMVDSML------ 147 (395)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHH-H-----HEEE--SCC-C------C------
T ss_pred eEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCccccccc-c-----cccc--cCc-cccchhhc------
Confidence 9999999999999999999999999999999999999999876543110 0 0000 000 00011110
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc-c----eeeccCCCcc-
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD-K----TISKDNGVRV- 277 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~-~----~~~~de~~~~- 277 (472)
...+.++.....|++.+++|+++||+|||++++|++++|++|.+|+++|+|+ +++|+.... + .++.|+.+|+
T Consensus 148 -~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~ 226 (395)
T 4e1l_A 148 -TDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLG 226 (395)
T ss_dssp -CTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTT
T ss_pred -ccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCC
Confidence 1111233334579999999999999999999999999999999999999997 589987622 1 4677888885
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVL 357 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al 357 (472)
+|+|++++++|+| .|+|++|.+|||+++||++++||++++.|++++.+|+++|.|++...++|.. +..++..+++++|
T Consensus 227 ~t~e~l~~~~~v~-~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~~~~~~~ai~~al 304 (395)
T 4e1l_A 227 MTFEGLSKLKPAF-KKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEV-MGTGPIPATRKAL 304 (395)
T ss_dssp CCHHHHHHCCBSS-STTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGG-TTCTHHHHHHHHH
T ss_pred CCHHHHhhCCCcc-CCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCc-chHHHHHHHHHHH
Confidence 8999999999999 4679999999999999999999999999999999999999999998776653 5667899999999
Q ss_pred HHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~ 437 (472)
+++|++++|||++|+||+|++..+...+.|| | +..++|++||++++|||.||||+++++++++
T Consensus 305 ~~agl~~~dId~ve~~d~fa~~~~~~~~~lg---~--------------~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~ 367 (395)
T 4e1l_A 305 KKAGLSINDIDLIEANEAFAAQALAVKNELQ---I--------------DSSKLNVNGGAIALGHPIGASGARILVTLIY 367 (395)
T ss_dssp HHTTCCGGGCSEEEECCSBHHHHHHHHHHHT---C--------------CGGGBSTTCCHHHHCCCTTTHHHHHHHHHHH
T ss_pred HHcCCCHHHcCEEEecChhHHHHHHHHHHhC---C--------------CCCCCCcCCchhhcCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 3 4445999999999999999999999999999
Q ss_pred HHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 438 RLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 438 qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
||+++.++++|++.|++||+|.++|||+
T Consensus 368 ~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 368 EMQKRKVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp HHHHHTCSEEEEEEESSTTEEEEEEEEC
T ss_pred HHHhcCCCEEEEEEccCCCceEEEEEeC
Confidence 9999999999999999999999999986
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-63 Score=510.55 Aligned_cols=374 Identities=31% Similarity=0.451 Sum_probs=307.9
Q ss_pred CCceEEEecccccccc-cCccCCCCCHHHHHHHHHHHHHHH-cCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCC
Q psy1213 46 GKNIVFVDGVRTPFLL-SGTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSD 122 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~-~~~~~~~~~~~~La~~A~~~Al~~-agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~ 122 (472)
++++|||+++||||++ +++.+.++++.+|+.+|+++||++ +|+++++||.+++++..++.. .++++++++..+|+|.
T Consensus 6 ~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~ 85 (407)
T 3svk_A 6 SEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPE 85 (407)
T ss_dssp -CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCT
T ss_pred CCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCC
Confidence 4689999999999996 566778899999999999999999 999999999999999887653 5789999999999976
Q ss_pred CCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCC
Q psy1213 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFF 202 (472)
Q Consensus 123 ~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (472)
.+|+++|+++|+|++++|..|+++|++|++|++||+|+|+||+.|+...... . ..+. .+
T Consensus 86 ~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~-----------~------~~~~----~~ 144 (407)
T 3svk_A 86 TTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGA-----------W------ATDP----ET 144 (407)
T ss_dssp TCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC----------------------C------CCCT----TT
T ss_pred CCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccc-----------c------ccCc----hh
Confidence 8999999999999999999999999999999999999999998776431100 0 0000 00
Q ss_pred CCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc--ceeeccCCCc-cC
Q psy1213 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD--KTISKDNGVR-VS 278 (472)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~--~~~~~de~~~-~~ 278 (472)
..+ .....|++.+++++++|+++|++|++|+..+|++|..|.++|+|+ +++|+...+ ..++.|+.+| ++
T Consensus 145 --~~~-----~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~ 217 (407)
T 3svk_A 145 --NYR-----IGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDT 217 (407)
T ss_dssp --CCC-----CCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTC
T ss_pred --hcc-----ccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCC
Confidence 001 112468999999999999999999999999999999999999997 589986422 1367788888 49
Q ss_pred CHHHHhcCCCcccCCCCc---------------------eeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEe
Q psy1213 279 TPEQMAKLKPAFVKPHGS---------------------VTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYV 337 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~---------------------l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~ 337 (472)
|+|++++++|+| .|.+. +|.+|||+++|||+++||++++.|++++.+|+++|+|++..
T Consensus 218 t~e~l~~~~~vf-~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~ 296 (407)
T 3svk_A 218 TMEGLAKLKTAF-DGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATS 296 (407)
T ss_dssp CHHHHHTSCBSC-C-------------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC
T ss_pred CHHHHhhCCCee-cCCCccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEe
Confidence 999999999998 34443 48999999999999999999999999999999999999998
Q ss_pred ccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCC
Q psy1213 338 SQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGS 417 (472)
Q Consensus 338 ~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~ 417 (472)
+++|.. +..++..+++++|+++|++++|||++|+||+|+.+++..+|.|| | +.++||++||+
T Consensus 297 ~~~p~~-~~~~~~~a~~~al~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg---~--------------~~~~vn~~Gg~ 358 (407)
T 3svk_A 297 GSDPVI-MLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLN---I--------------PDEKLNVNGGA 358 (407)
T ss_dssp -------CCCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHT---C--------------CGGGBSTTCCH
T ss_pred ccCCcc-ccHHHHHHHHHHHHHcCCCHHHCCEEEEeChhHHHHHHHHHHhC---C--------------CCCCCCCCCcH
Confidence 777654 57788999999999999999999999999999999999999999 4 44459999999
Q ss_pred ccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 418 LSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 418 ~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++|||+||||+++++++++||+++.+++||++.|++||+|.++|||+.
T Consensus 359 ~~~GHp~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~~ 407 (407)
T 3svk_A 359 IAMGHPLGATGAMITGTMVDELERRNARRALITLCIGGGMGVATIIERV 407 (407)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHHTCCEEEEEEECSSSCEEEEEEEEC
T ss_pred hheeCcHHHHHHHHHHHHHHHHHhcCCCEEEEEeeccCcceEEEEEEcC
Confidence 9999999999999999999999999999999999999999999999984
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-62 Score=505.90 Aligned_cols=386 Identities=30% Similarity=0.462 Sum_probs=326.9
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
++++||||++||||++..+.+.++++.+|+.+|+++||+|+|+++++||.+++|+..+++..++++..++..+|++..+|
T Consensus 5 ~~~v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 84 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVP 84 (397)
T ss_dssp CSCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCcc
Confidence 46899999999999997777778999999999999999999999999999999998877666789999999999965799
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++|+++|+|++.||.+|++.|++|++|++||+|+|+|+..|+.....+ ... .+. ...++...
T Consensus 85 ~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~-------~~~--~~~-~~~~~~~~------- 147 (397)
T 1wl4_A 85 AWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRT-------GVK--IGE-MPLTDSIL------- 147 (397)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSS-------CCS--SSC-CCCEEHHH-------
T ss_pred EEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccc-------ccc--cCc-ccccchhc-------
Confidence 9999999999999999999999999999999999999998775421000 000 000 00000000
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc----ceeeccCCCc-cCC
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD----KTISKDNGVR-VST 279 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~----~~~~~de~~~-~~t 279 (472)
..++.++.....|++++++|+++||+|||++++|++++|++|.+|+.+|+|+ |+.|+.... ..++.|+.+| ++|
T Consensus 148 ~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t 227 (397)
T 1wl4_A 148 CDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSN 227 (397)
T ss_dssp HHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCC
T ss_pred cccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCC
Confidence 0001111112569999999999999999999999999999999999999997 588986521 1245677776 489
Q ss_pred HHHHhcCCCcccC-CCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVK-PHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358 (472)
Q Consensus 280 ~~~~~~~~p~~~~-~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~ 358 (472)
+|+|++++|+|.. .+|++|++|||+++|||+++||++++.|++++.+|+++|+|++.....|.. +..++..++++||+
T Consensus 228 ~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~~~~~~~a~~~al~ 306 (397)
T 1wl4_A 228 IEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSI-MGIGPIPAIKQAVT 306 (397)
T ss_dssp HHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhh-ccchHHHHHHHHHH
Confidence 9999999998732 238999999999999999999999999999999999999999998876643 56788999999999
Q ss_pred HcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANR 438 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~q 438 (472)
++|++++|||+||+||+|+++.+..++.|| + +..++|++||++++|||+||||+++++++++|
T Consensus 307 ~Agl~~~dId~ie~~d~f~~~~l~~~~~lg---~--------------~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~ 369 (397)
T 1wl4_A 307 KAGWSLEDVDIFEINEAFAAVSAAIVKELG---L--------------NPEKVNIEGGAIALGHPLGASGCRILVTLLHT 369 (397)
T ss_dssp HHTCCGGGCCEEEECCSBHHHHHHHHHHHT---C--------------CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHCCEEEEecccHHHHHHHHHHcC---C--------------CCcCcCCCcCccccCCChhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999 4 33459999999999999999999999999999
Q ss_pred HhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 439 LVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 439 L~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|+++.++++|+++|++||++.++|||+.
T Consensus 370 L~~~~~~~gl~~~~~ggG~~~a~~~e~~ 397 (397)
T 1wl4_A 370 LERMGRSRGVAALCIGGGMGIAMCVQRE 397 (397)
T ss_dssp HHHHTCCEEEEEEEETTTEEEEEEEEEC
T ss_pred HhhcCCCEEEEEEecccchheEEEEEeC
Confidence 9999999999999999999999999983
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-63 Score=506.67 Aligned_cols=377 Identities=35% Similarity=0.543 Sum_probs=328.5
Q ss_pred cCCceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHc-CCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFS 121 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~a-gi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~ 121 (472)
+|++++|||++||||+++ ++.+.++++.+|+.+|+++||+|+ |+++++||.+++|+..+++. .++++.+++..+|++
T Consensus 3 ~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~ 82 (390)
T 1wdk_C 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIP 82 (390)
T ss_dssp CTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSC
T ss_pred CCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCC
Confidence 467899999999999997 567778999999999999999999 99999999999998877654 367899999999996
Q ss_pred CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCC
Q psy1213 122 DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDF 201 (472)
Q Consensus 122 ~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (472)
..+|+++|+++|+|++.+|++|++.|++|++|++||+|+|.++..|+.... + . +. .+
T Consensus 83 ~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~-~-------~------------~~---~~ 139 (390)
T 1wdk_C 83 HTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV-D-------P------------NP---HM 139 (390)
T ss_dssp TTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB-C-------C------------CG---GG
T ss_pred CCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCccccc-c-------c------------Cc---cc
Confidence 679999999999999999999999999999999999999999876653210 0 0 00 00
Q ss_pred CCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec---c--ceeeccCCC
Q psy1213 202 FIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG---D--KTISKDNGV 275 (472)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~---~--~~~~~de~~ 275 (472)
.. + ++.....|++.+++|+++||+|++++++|++++|++|..|++.|+|+ ++.|.+.. + ++|+.|+.+
T Consensus 140 ~~---~---~~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~ 213 (390)
T 1wdk_C 140 SL---Y---AAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETI 213 (390)
T ss_dssp GG---T---SCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTC
T ss_pred cc---c---CCcchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeecccccc
Confidence 00 0 00111348999999999999999999999999999999999999986 57898641 1 589999888
Q ss_pred cc-CCHHHHhcCCCcccCC-CCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHH
Q psy1213 276 RV-STPEQMAKLKPAFVKP-HGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYAT 353 (472)
Q Consensus 276 ~~-~t~~~~~~~~p~~~~~-~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~ 353 (472)
|+ +|+|+|++++|++ +| +|.+|++|||+++|||+++||++++.|++++.+|+++|+|++...++|.. +..++..++
T Consensus 214 r~~~t~e~~~~~~~i~-~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~-~~~~~~~a~ 291 (390)
T 1wdk_C 214 RPDTTLESLAALKPAF-NPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAI-MGYGPVPAT 291 (390)
T ss_dssp CTTCCHHHHHTSCCSS-CTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGG-GGGTHHHHH
T ss_pred CCCCCHHHHhcCCCcc-cCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhh-cchhHHHHH
Confidence 85 8999999999999 56 88899999999999999999999999999999999999999998776653 567889999
Q ss_pred HHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 354 PQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 354 ~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
++||++||++++|||++|+||+|+++.+..+|.|| ||++. ..++|++||++++|||+||+|+++++
T Consensus 292 ~~al~~Agl~~~dId~ve~~d~f~~~~~~~~~~lg---~~~~~-----------~~~vn~~gg~~~~GHp~gasG~~~~~ 357 (390)
T 1wdk_C 292 QKALKRAGLNMADIDFIELNEAFAAQALPVLKDLK---VLDKM-----------NEKVNLHGGAIALGHPFGCSGARISG 357 (390)
T ss_dssp HHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTT---CGGGH-----------HHHBSTTCCHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHcCCChhhCcEEEeccCCHHHHHHHHHHcC---CCCCC-----------CCcCCCCcCcccccCCcchhHHHHHH
Confidence 99999999999999999999999999999999999 66320 12399999999999999999999999
Q ss_pred HHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++++||+++.+++||+++|++||++.++|||+.
T Consensus 358 ~~~~~L~~~~~~~gl~~~~~ggG~~~a~~~~~~ 390 (390)
T 1wdk_C 358 TLLNVMKQNGGTFGLSTMCIGLGQGIATVFERV 390 (390)
T ss_dssp HHHHHHHHTTCSEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHhhcCCCEEEEEecccchheEEEEEEeC
Confidence 999999999999999999999999999999973
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-62 Score=500.83 Aligned_cols=384 Identities=33% Similarity=0.520 Sum_probs=328.5
Q ss_pred cCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~ 124 (472)
.+++++|||++||||+++.+.+.++++.+|+.+|+++||+|+|+++++||.+++|+..+++..++++..++..+|++..+
T Consensus 6 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~ 85 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPIST 85 (395)
T ss_dssp BCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTC
T ss_pred CCCCeEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCc
Confidence 45689999999999999877777899999999999999999999999999999999888777788999999999996579
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++..|+...... ...+. ....+.. .
T Consensus 86 p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~----------~~~~~-~~~~~~~---~--- 148 (395)
T 2ib8_A 86 PCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGS----------TPYGG-VKLEDLI---V--- 148 (395)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSB----------CCTTC-EEEEEHH---H---
T ss_pred eEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccc----------ccccc-ccccccc---c---
Confidence 99999999999999999999999999999999999999988765321000 00000 0000000 0
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec--cc---eeeccCCCccC
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG--DK---TISKDNGVRVS 278 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~--~~---~~~~de~~~~~ 278 (472)
+..++++.....|++.+++|+++||+|+++++++++++|++|..|+..|+|+ ++.|+... ++ .++.||.++++
T Consensus 149 -~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~ 227 (395)
T 2ib8_A 149 -KDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRV 227 (395)
T ss_dssp -HHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSC
T ss_pred -ccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccC
Confidence 0111122234579999999999999999999999999999999999999887 47887652 23 37889999988
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~ 358 (472)
+.+.+.+++|+|.+++|++|++|||+++|||+++||++++.|++++.+|+++|+|++....+|.. +..++..++++||+
T Consensus 228 ~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~-~~~~~~~a~~~al~ 306 (395)
T 2ib8_A 228 DFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPID-FPIAPVYAASMVLK 306 (395)
T ss_dssp CTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGG-GGGHHHHHHHHHHH
T ss_pred CHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhh-ccccHHHHHHHHHH
Confidence 89999999999966679999999999999999999999999999999999999999987666643 45677899999999
Q ss_pred HcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANR 438 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~q 438 (472)
+||++++|||++|+||+|+++.+..+|+|| || .+++|++||++++|||+||||+++++++++|
T Consensus 307 ~Agl~~~dId~ie~~D~f~~~~l~~~e~lg---~~--------------~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~ 369 (395)
T 2ib8_A 307 DVGLKKEDIAMWEVNEAFSLVVLANIKMLE---ID--------------PQKVNINGGAVSLGHPIGMSGARIVGHLTHA 369 (395)
T ss_dssp HHTCCGGGEEEEEECCSBHHHHHHHHHHHT---CC--------------GGGBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHcCEEEEccccHHHHHHHHHHcC---CC--------------ccccCCCcchhhcCCChhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 43 3359999999999999999999999999999
Q ss_pred HhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 439 LVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 439 L~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
||+ +++||++.|++||++.+++||+.
T Consensus 370 L~~--~~~gl~~~~~ggG~g~a~~~~~~ 395 (395)
T 2ib8_A 370 LKQ--GEYGLASICNGGGGASAMLIQKL 395 (395)
T ss_dssp SCT--TCEEEEEEEETTTEEEEEEEEEC
T ss_pred Hhh--CCceEEEEecccCHhheEEEEcC
Confidence 997 78999999999999999999973
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-51 Score=430.55 Aligned_cols=385 Identities=17% Similarity=0.104 Sum_probs=273.8
Q ss_pred cccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCC------------CC
Q psy1213 41 VKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQE------------VK 106 (472)
Q Consensus 41 ~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~------------~~ 106 (472)
||..+.+ ..+|||+++|++.+..+.+.+.++.||+.+|+++||+|+|+++++||.+|.|+.... ..
T Consensus 10 ~ma~mvdPRtPVIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~ 89 (520)
T 4egv_A 10 HMASMVDPRTPVIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGV 89 (520)
T ss_dssp -----CCTTCEEEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC-------------
T ss_pred hhhccCCCCCeEEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhcc
Confidence 4444443 678999999999876666778999999999999999999999999887665543221 12
Q ss_pred CChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCC
Q psy1213 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKT 186 (472)
Q Consensus 107 ~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 186 (472)
..+++..++..+|++ ..+.++++.+|+|++.+|+.|++.|++|++|++|++|+|+||+.|+.........+........
T Consensus 90 ~~~~~~~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~ 168 (520)
T 4egv_A 90 SSNYPRSVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQL 168 (520)
T ss_dssp -CCHHHHHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------
T ss_pred ccCHHHHHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccc
Confidence 356788999999997 6889999999999999999999999999999999999999999887543221111100000000
Q ss_pred chhhhhhhhccCCCCCCCCccccccccc-CCchhHHHHHHHHHhCCCHHH----HHHHHHHhHHHHHHHHHcCCCCCCcc
Q psy1213 187 PADRLKLLATIRPDFFIPELPAVAEFSS-GETMGHSADRLAAAFKVSRKE----QDEYALRSHTLAQQAQEKGYLTDILP 261 (472)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~g~t~e~----~~~~a~~~~~~a~~a~~~g~~~~~~P 261 (472)
.. ..+........+...++... ...+++.+++|+++|++++++ +..+++++++++.. ||
T Consensus 169 ~~------~~~~~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~----------np 232 (520)
T 4egv_A 169 ED------RGYGYDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAK----------NP 232 (520)
T ss_dssp ------------------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH----------CT
T ss_pred cc------cccccchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEeccccccc----------Cc
Confidence 00 00000000000111111111 234678899999999999764 56777888887765 78
Q ss_pred ceeccceeeccCCCccCCHHHHhcCCCcccCC-CCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccC
Q psy1213 262 IQVGDKTISKDNGVRVSTPEQMAKLKPAFVKP-HGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQD 340 (472)
Q Consensus 262 ~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~-~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~ 340 (472)
.++.+++ +|+|++++++|.+..- ++..|+.|||+++|||+|+||+|++.|+++|++|+++|++++....+
T Consensus 233 ~a~~r~~---------~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~ 303 (520)
T 4egv_A 233 YSSAPTE---------RSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMK 303 (520)
T ss_dssp TSSSCCC---------CCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEE
T ss_pred cccccCC---------CCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccC
Confidence 7765433 5899999887766321 34457789999999999999999999999999999999888876654
Q ss_pred Cccc-------ccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCC
Q psy1213 341 PKDQ-------LLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNN 413 (472)
Q Consensus 341 p~~~-------~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~ 413 (472)
|... ...++..+++++|++||++++|||++|+||||++++++.+|+|| ||++++ .++|+
T Consensus 304 ~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~~~~l~~~~~lG---~~~~~~-----------~~~n~ 369 (520)
T 4egv_A 304 EPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNICDGTG---LATDDP-----------RGLTL 369 (520)
T ss_dssp CCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHHHHC---CCTTCT-----------TCSCS
T ss_pred CcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHHHhC---CCCCCC-----------CCcCC
Confidence 3321 12355789999999999999999999999999999999999999 777543 23999
Q ss_pred CCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcc---eeEEEEEeCC
Q psy1213 414 WGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQ---GVGMIIERHP 467 (472)
Q Consensus 414 ~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~---~~a~~l~~~~ 467 (472)
+||++++|||++++|++.++|+++|||++.++++|++ ..||. ..+++|.+.|
T Consensus 370 ~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~~--~~gg~~~~~~~~~l~~~~ 424 (520)
T 4egv_A 370 TGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALVG--ANGGIASKYSVGIYSTEP 424 (520)
T ss_dssp SCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEEE--EEETTTTEEEEEEEESSC
T ss_pred CcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEEe--CCCCeeeeeeEEEEcCCC
Confidence 9999999999999999999999999999999999996 33564 5667777754
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=299.54 Aligned_cols=280 Identities=20% Similarity=0.209 Sum_probs=211.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCc-cC----EEEEEeecC--------------------------CCCCChHHHHHHHHc
Q psy1213 70 MAHELARHSLIGILQKTGISKDL-ID----YIVYGTVIQ--------------------------EVKTSNIGREAALSA 118 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~-Id----~vi~g~~~~--------------------------~~~~~~~a~~ia~~l 118 (472)
...+|+++|+++||+|+|+++++ +| ++++|+..+ ....+..+.+++..+
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 46789999999999999999998 88 688887532 122345688999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 166 gl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~-----~~~~------------------- 218 (428)
T 3kzu_A 166 KL--RGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVS-RISL-----AGFA------------------- 218 (428)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHH-----HHHH-------------------
T ss_pred CC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCC-HHHH-----HHHH-------------------
Confidence 99 5799999999999999999999999999999999999998432 1000 0000
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccC
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~ 278 (472)
+.+++.+++.+ .|.. ..++|+.+
T Consensus 219 -----------------------~~~~ls~~~~~---------------------------~~~~-~~~pfd~~------ 241 (428)
T 3kzu_A 219 -----------------------ACKALSTERND---------------------------DPTA-ASRPYDED------ 241 (428)
T ss_dssp -----------------------HTTCBCCSCTT---------------------------SGGG-TCCTTBTT------
T ss_pred -----------------------HccccccCccC---------------------------Cccc-ccCCcccC------
Confidence 00000000000 0100 00122111
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~ 354 (472)
.++..++|||+++||++.+.|++++.+++++|+|++...+... .....+...+++
T Consensus 242 ---------------------~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~ 300 (428)
T 3kzu_A 242 ---------------------RDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMV 300 (428)
T ss_dssp ---------------------CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHH
T ss_pred ---------------------CCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHH
Confidence 3455599999999999999999999999999999998764211 112345689999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
+||++||++++|||++|+|++++.....+++++... |.. +..++|++|++..+|||.||+|+.++++
T Consensus 301 ~al~~Agl~~~dId~ve~HgtgT~~d~~e~~al~~~-~g~------------~~~~~~v~s~k~~~GH~~gAsG~~~~i~ 367 (428)
T 3kzu_A 301 AALKRAGIVPDEIDYINAHGTSTMADTIELGAVERV-VGE------------AAAKISMSSTKSSIGHLLGAAGAAEAVF 367 (428)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSSTTHHHHHHHHHHH-HGG------------GGGGCEEECTHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHcCCCHHHeeEEEecCCcchhhHHHHHHHHHH-hcc------------CCCceeeCCchhhhCCCchhhHHHHHHH
Confidence 999999999999999999999997788877777521 211 2235899999999999999999999999
Q ss_pred HHHHHhhc---------------------------cCCcchhhhhccCcceeEEEEEeCC
Q psy1213 435 AANRLVRE---------------------------DGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 435 ~v~qL~~~---------------------------~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+++||+++ ..+++++++++.||.++++||++.+
T Consensus 368 ~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 368 STLAIRDNIAPATLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp HHHHHHHTEECCBTTCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHhccCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEeecC
Confidence 99999975 1257888899999999999999864
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=283.16 Aligned_cols=278 Identities=18% Similarity=0.163 Sum_probs=210.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCC-----------------CC---------CChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQE-----------------VK---------TSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~-----------------~~---------~~~~a~~ia~~lG 119 (472)
...+|+++|+++||+|+|+++++|| +|++|+..+. .. ...++.+++..+|
T Consensus 73 ~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 152 (413)
T 3o04_A 73 RFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFG 152 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhC
Confidence 3567999999999999999999999 9999986421 11 1234788999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ ++|+++|+++|+|+++||++|+++|++|++|++||+|+|.+.... .. ..+.
T Consensus 153 l--~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~-~~-----~~~~-------------------- 204 (413)
T 3o04_A 153 A--KGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKM-SL-----AGFT-------------------- 204 (413)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHH-HH-----HHHH--------------------
T ss_pred C--CCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHH-HH-----HHHH--------------------
Confidence 9 479999999999999999999999999999999999999854211 00 0000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCccC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~~ 278 (472)
..+.+.. ..|... .++|+.+
T Consensus 205 ----------------------------------------------------~~~~ls~~~~p~~~-~~pfd~~------ 225 (413)
T 3o04_A 205 ----------------------------------------------------ANKALSLNPDPETA-CRPFDKD------ 225 (413)
T ss_dssp ----------------------------------------------------HTTCBCCCCCTTTS-CCTTBTT------
T ss_pred ----------------------------------------------------hcccccCCCCCCCC-cCCCcCC------
Confidence 0000000 011110 0122111
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~ 354 (472)
.++..++|||+++||++++.|++++.+++++|.|++...+... .....+...+++
T Consensus 226 ---------------------~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~ 284 (413)
T 3o04_A 226 ---------------------RDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMK 284 (413)
T ss_dssp ---------------------CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHH
T ss_pred ---------------------CCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHH
Confidence 2344599999999999999999999999999999998765211 112334678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||++||++++|||++|+|+++|. .+.++++++... |++. ..++|+++++..+|||.||+|+.+++
T Consensus 285 ~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al~~~-~~~~------------~~~~~v~s~k~~~GH~~gAsG~~~~~ 351 (413)
T 3o04_A 285 MAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTV-FGEH------------AKKLAISSTKSMTGHTLGASGGIEAI 351 (413)
T ss_dssp HHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHH-HGGG------------TTTSEEECTHHHHCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHH-hccc------------CCCCceecccccccccHHHHHHHHHH
Confidence 999999999999999999999997 466777776522 3321 12378888889999999999999999
Q ss_pred HHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 434 HAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 434 e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
++++||+++. .++++++++++||.++++||++.++
T Consensus 352 ~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~~~ 413 (413)
T 3o04_A 352 FALLTIRDNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVFKRIED 413 (413)
T ss_dssp HHHHHHHHTEECCBTTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEECCCC
T ss_pred HHHHHHHhCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCceEEEEEEEeCCC
Confidence 9999998752 2577888999999999999998753
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=283.95 Aligned_cols=274 Identities=14% Similarity=0.176 Sum_probs=205.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC-----------------C---------CChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV-----------------K---------TSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~-----------------~---------~~~~a~~ia~~lGl 120 (472)
..+|+++|+++||+|+|+++++|| +|++|+..++. . ...++.+++..+|+
T Consensus 77 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 156 (416)
T 1e5m_A 77 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA 156 (416)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC
Confidence 458999999999999999999999 79999865431 0 12478899999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeeccc-CCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM-SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
++|+++|+++|+|++.||++|+++|++|++|++||+|+|.+ +...+. .+.
T Consensus 157 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~-------~~~-------------------- 207 (416)
T 1e5m_A 157 --KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYA-------GFA-------------------- 207 (416)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHH-------HHH--------------------
T ss_pred --CCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHH-------HHH--------------------
Confidence 47999999999999999999999999999999999999974 321100 000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC--CccceeccceeeccCCCcc
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD--ILPIQVGDKTISKDNGVRV 277 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~--~~P~a~~~~~~~~de~~~~ 277 (472)
. .+.+.. .+|... .+||+.+
T Consensus 208 ----------------------------~------------------------~~~ls~~~~~p~~~-~rpfd~~----- 229 (416)
T 1e5m_A 208 ----------------------------S------------------------ARALSFRNDDPLHA-SRPFDKD----- 229 (416)
T ss_dssp ----------------------------H------------------------TTCBCCCTTCGGGT-CCTTBTT-----
T ss_pred ----------------------------H------------------------cCCccCCCCCCccc-cccCccC-----
Confidence 0 000000 012111 1222211
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYAT 353 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~ 353 (472)
.++..++|||+++||++.+.|++++.+++++|+|++...+.... ....+...++
T Consensus 230 ----------------------~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai 287 (416)
T 1e5m_A 230 ----------------------RDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAI 287 (416)
T ss_dssp ----------------------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHH
T ss_pred ----------------------CCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHH
Confidence 34555999999999999999999999999999999987653211 1234468899
Q ss_pred HHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHH
Q psy1213 354 PQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLT 432 (472)
Q Consensus 354 ~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v 432 (472)
++||+++|++++|||++|+|++++.. +.++++++... |.+. .+ ++++++.+..+||+.+|+|+.++
T Consensus 288 ~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-~g~~-------~~-----~~~v~s~k~~~GH~~gAaG~~~~ 354 (416)
T 1e5m_A 288 AWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQA-LGNH-------AY-----NIAVSSTKSMTGHLLGGSGGIEA 354 (416)
T ss_dssp HHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HGGG-------GG-----GSEEECTHHHHCBCGGGHHHHHH
T ss_pred HHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHH-Hccc-------CC-----CCeeeCcchhhcccHHHHHHHHH
Confidence 99999999999999999999999973 66666666521 3111 11 24444445558999999999999
Q ss_pred HHHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 433 VHAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 433 ~e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++++||+++. .+++++++++.||.++++||++.
T Consensus 355 i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 355 VATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp HHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHHhcCCcCCCCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEEeC
Confidence 99999999752 25778889999999999999974
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=285.09 Aligned_cols=275 Identities=21% Similarity=0.216 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCC--------------------------CCCChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQE--------------------------VKTSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~--------------------------~~~~~~a~~ia~~lGl 120 (472)
...|+++|+++||+|+|+++++|| ++++|+..+. .....++.+++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 567999999999999999999999 6888876421 1123467899999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
++|+++|+++|+|+++||++|+++|++|++|++||+|+|.++. |... ..+. .
T Consensus 168 --~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~-----~~~~----------------~---- 219 (427)
T 3ho9_A 168 --RGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKAST-PLGV-----GGFG----------------A---- 219 (427)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHH-----HHHH----------------H----
T ss_pred --CCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHH-----HHHH----------------h----
Confidence 5799999999999999999999999999999999999999863 1110 0000 0
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC--CccceeccceeeccCCCccC
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD--ILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~--~~P~a~~~~~~~~de~~~~~ 278 (472)
.+.+.. ..|... .++|+.
T Consensus 220 ----------------------------------------------------~~~ls~~~~~~~~~-~~pfd~------- 239 (427)
T 3ho9_A 220 ----------------------------------------------------ARALSTRNDNPQAA-SRPWDK------- 239 (427)
T ss_dssp ----------------------------------------------------TTCBCCCTTCHHHH-CCTTBT-------
T ss_pred ----------------------------------------------------ccCcccCCCCCCcc-cCCccC-------
Confidence 000000 001000 012211
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~ 354 (472)
. .++..++|||+++||++++.|++++.+++++|.|++...+... .....+...+++
T Consensus 240 -------------~-------~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~ 299 (427)
T 3ho9_A 240 -------------E-------RDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMA 299 (427)
T ss_dssp -------------T-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHH
T ss_pred -------------C-------CCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHH
Confidence 1 2334489999999999999999999999999999998765211 113445688999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||++||++++|||++|+|+++|.. ...+++++... |.. +..++|+++++..+|||.||+|+.+++
T Consensus 300 ~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~-~g~------------~~~~~~v~s~k~~~GH~~gAsG~~~~i 366 (427)
T 3ho9_A 300 NALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTI-FGE------------AASRVLVSSTKSMTGHLLGAAGAVESI 366 (427)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HGG------------GGGTSEEECTHHHHCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHH-hcc------------cCCCeEEecchHhhccCHHHHHHHHHH
Confidence 9999999999999999999999963 33444443311 211 223489999999999999999999999
Q ss_pred HHHHHHhhc----------------------------cCCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVRE----------------------------DGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~----------------------------~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++++||+++ ..++++++++++||.++++||++.
T Consensus 367 ~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 367 YSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp HHHHHHHHTEECCBTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHhcCCCCCCCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEeC
Confidence 999999875 236788899999999999999873
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=283.72 Aligned_cols=277 Identities=20% Similarity=0.247 Sum_probs=204.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
...+|+++|+++||+|+|+++++|| ++++++..+++ ....++.+++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 4678999999999999999999999 47777655432 01246889999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ ++|+++|+++|+|++.||++|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 150 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~-----~~~~-------------------- 201 (408)
T 1j3n_A 150 F--TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PMAI-----GAFA-------------------- 201 (408)
T ss_dssp C--CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHH-----HHHH--------------------
T ss_pred C--CCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHH-----HHHH--------------------
Confidence 9 4799999999999999999999999999999999999997432 1100 0000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t 279 (472)
..+++..++.+++ .. .+||+.
T Consensus 202 ----------------------~~~~ls~~~~~p~----------------------------~~-~~pfd~-------- 222 (408)
T 1j3n_A 202 ----------------------VMRALSTRNEEPE----------------------------KA-SRPFTL-------- 222 (408)
T ss_dssp ----------------------HTTCBCCCTTCHH----------------------------HH-CCTTBT--------
T ss_pred ----------------------hcccccCCCCCCC----------------------------cC-cccCcC--------
Confidence 0000000000100 00 012211
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATPQ 355 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~ 355 (472)
..++..++|||+++||++.+.|++++.+++++|+|++...+.... ....+...++++
T Consensus 223 -------------------~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~ 283 (408)
T 1j3n_A 223 -------------------SRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMAR 283 (408)
T ss_dssp -------------------TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHH
T ss_pred -------------------CCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHH
Confidence 124555899999999999999999999999999999987642111 123455789999
Q ss_pred HHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 356 VLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 356 Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
||++||++++|||++|+|++++.. ..++++++... |.. +..++|+++++..+||+.+|+|+.++++
T Consensus 284 al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~-~g~------------~~~~~~v~s~k~~~GH~~~AsG~~~li~ 350 (408)
T 1j3n_A 284 ALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRV-FGD------------HAKRLMVSSTKSMIGHLLGAAGAVEAIA 350 (408)
T ss_dssp HHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HHH------------HHTTCEEECTHHHHCBCGGGHHHHHHHH
T ss_pred HHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHH-hcC------------cCCCceEECchhhhccCHHHHHHHHHHH
Confidence 999999999999999999999974 33333333210 211 1223788889999999999999999999
Q ss_pred HHHHHhhcc--------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 435 AANRLVRED--------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 435 ~v~qL~~~~--------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++++|+++. .+++++++++.||.++++||++
T Consensus 351 ~~l~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 351 TVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp HHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred HHHHHhcCCCCCCCCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 999999742 3578888999999999999986
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.1e-32 Score=283.06 Aligned_cols=278 Identities=18% Similarity=0.192 Sum_probs=205.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCcc-C----EEEEEeecCC--------------------------CCCChHHHHHHHHc
Q psy1213 70 MAHELARHSLIGILQKTGISKDLI-D----YIVYGTVIQE--------------------------VKTSNIGREAALSA 118 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~I-d----~vi~g~~~~~--------------------------~~~~~~a~~ia~~l 118 (472)
...+|+++|+++||+|+|+++++| | ++++|+..+. ...+.++.+++..+
T Consensus 101 ~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 180 (451)
T 4ddo_A 101 RFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH 180 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence 467899999999999999999999 7 7888875321 11234678999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ .+|+++|+++|+|+++||.+|+++|++|++|++||+|+|.++... . + ..+. .
T Consensus 181 gl--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~-~----~-~~~~----------------~-- 234 (451)
T 4ddo_A 181 RF--RGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKV-S----L-GGFA----------------A-- 234 (451)
T ss_dssp TC--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHH-H----H-HHHH----------------H--
T ss_pred cC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHH-H----H-HHHH----------------H--
Confidence 99 579999999999999999999999999999999999999865311 0 0 0000 0
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC---CccceeccceeeccCCC
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD---ILPIQVGDKTISKDNGV 275 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~---~~P~a~~~~~~~~de~~ 275 (472)
.+.+.+ ..|... .++|+.+
T Consensus 235 ------------------------------------------------------~~~ls~~~~~~~~~~-~~pfd~~--- 256 (451)
T 4ddo_A 235 ------------------------------------------------------ARALSTGFSEEPVRA-SRPFDRD--- 256 (451)
T ss_dssp ------------------------------------------------------TTCBCCSCTTSGGGS-CCTTBTT---
T ss_pred ------------------------------------------------------HhhhccCCCcCcccc-ccccccC---
Confidence 000000 001110 0122211
Q ss_pred ccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccc----ccccHHH
Q psy1213 276 RVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ----LLLGPAY 351 (472)
Q Consensus 276 ~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~----~~~~~~~ 351 (472)
.+++.++|||+|+||++++.|++++.+++++|+|++...+..... ...+...
T Consensus 257 ------------------------~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ 312 (451)
T 4ddo_A 257 ------------------------RDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMR 312 (451)
T ss_dssp ------------------------CCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHH
T ss_pred ------------------------CCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHH
Confidence 345558999999999999999999999999999999876421110 1224478
Q ss_pred HHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHH
Q psy1213 352 ATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVR 430 (472)
Q Consensus 352 a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~ 430 (472)
++++||++||++++|||++|+|++++.. +.++++++... |.. .+. +++++.+..+|||.||+|+.
T Consensus 313 ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~-~~~--------~~~-----~~v~s~k~~~GH~~gAaG~~ 378 (451)
T 4ddo_A 313 AMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTV-FGV--------GAG-----PAISSTKSATGHLLGAAGAI 378 (451)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HCS--------SSS-----CEEECTHHHHCBCGGGHHHH
T ss_pred HHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHH-hCC--------CCC-----CcccCchhhhccCHHHHHHH
Confidence 9999999999999999999999999963 55555555421 211 111 44455556689999999999
Q ss_pred HHHHHHHHHhhc----------------------------cCCcchhhhhccCcceeEEEEEeCCCC
Q psy1213 431 LTVHAANRLVRE----------------------------DGQFGLIAACAAGGQGVGMIIERHPDA 469 (472)
Q Consensus 431 ~v~e~v~qL~~~----------------------------~g~~gl~~~~~~GG~~~a~~l~~~~~~ 469 (472)
+++++++||+++ ..+++++++++.||.++++||++.+..
T Consensus 379 ~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~~~ 445 (451)
T 4ddo_A 379 EAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRYPSD 445 (451)
T ss_dssp HHHHHHHHHHHTEECCCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEESCC-
T ss_pred HHHHHHHHHhcCCcCCCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCCCC
Confidence 999999999875 125678889999999999999998653
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.5e-32 Score=280.69 Aligned_cols=271 Identities=21% Similarity=0.207 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC--------------------------CChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK--------------------------TSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~--------------------------~~~~a~~ia~~lGl 120 (472)
..+|+++|+++||+|+|+ +++| +|++|+..+++. ...++.+++..+|+
T Consensus 83 ~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 160 (416)
T 2wge_A 83 VQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA 160 (416)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc
Confidence 457999999999999998 4455 488888765431 12467889999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
++|+++++++|+|+++||++|+++|++|++|++||+|+|.++..... ..+.
T Consensus 161 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~------~~~~--------------------- 211 (416)
T 2wge_A 161 --RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPI------AAFS--------------------- 211 (416)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHH------HHHH---------------------
T ss_pred --CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHH------HHHH---------------------
Confidence 58999999999999999999999999999999999999987542100 0000
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCH
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTP 280 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~ 280 (472)
..+++.+|+. .|... .+||+
T Consensus 212 ---------------------~~~~l~~~~~----------------------------~~~~~-~~pfd---------- 231 (416)
T 2wge_A 212 ---------------------MMRAMSTRND----------------------------EPERA-SRPFD---------- 231 (416)
T ss_dssp ---------------------TTTCBCCCTT----------------------------SGGGS-CCTTB----------
T ss_pred ---------------------hcchhhcccc----------------------------CCccc-ccccc----------
Confidence 0000000000 01000 01121
Q ss_pred HHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHHHH
Q psy1213 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATPQV 356 (472)
Q Consensus 281 ~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~~A 356 (472)
...++..++||++++||++++.|+++|.+++++|+|++...+... .....+...+++++
T Consensus 232 -----------------~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~a 294 (416)
T 2wge_A 232 -----------------KDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRS 294 (416)
T ss_dssp -----------------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHH
T ss_pred -----------------cCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHH
Confidence 113566699999999999999999999999999999998764211 11234568899999
Q ss_pred HHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHA 435 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~ 435 (472)
|+++|++++|||++|+|+++|.. +.+++++++ .+ +. + ++++++++..+|||.||+|+.+++++
T Consensus 295 l~~agl~~~dId~ve~HgtgT~~gD~~E~~al~---~~--~~------~-----~~~v~s~k~~~GH~~gAsG~~~~i~~ 358 (416)
T 2wge_A 295 LELAGLSPADIDHVNAHGTATPIGDAAEANAIR---VA--GC------D-----QAAVYAPKSALGHSIGAVGALESVLT 358 (416)
T ss_dssp HHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHH---HT--TC------T-----TSEEECTHHHHCBCGGGHHHHHHHHH
T ss_pred HHHcCCCHHHCCEEEECCCCCcCCCHHHHHHHH---Hh--cc------C-----CCCccCCcccccCcHHHHHHHHHHHH
Confidence 99999999999999999999974 666666665 22 11 1 25666677789999999999999999
Q ss_pred HHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 436 ANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 436 v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++||+++. .+++++++++.||.++++||++
T Consensus 359 ~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 359 VLTLRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp HHHHHHTEECCCTTCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHhcCCcCCCCCCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 99999752 2578888999999999999986
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-31 Score=277.13 Aligned_cols=276 Identities=14% Similarity=0.157 Sum_probs=207.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
...+|+++|+++||+|+|+++++|| +|++|+..++. ....++.+++..+|
T Consensus 97 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (437)
T 2gqd_A 97 RFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLG 176 (437)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhC
Confidence 4678999999999999999999999 99999875531 12357889999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ .+|+++|+++|+|++.||++|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 177 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~-----~~~~-------------------- 228 (437)
T 2gqd_A 177 A--KGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HMAI-----AGFS-------------------- 228 (437)
T ss_dssp C--CSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHH-----HHHH--------------------
T ss_pred C--CCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHH-----HHHH--------------------
Confidence 9 4699999999999999999999999999999999999998532 1100 0000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCccC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~~ 278 (472)
+.+.+.. .+|... .+||+.
T Consensus 229 ----------------------------------------------------~~~~ls~~~~p~~~-~~pfd~------- 248 (437)
T 2gqd_A 229 ----------------------------------------------------ASRALSTNDDIETA-CRPFQE------- 248 (437)
T ss_dssp ----------------------------------------------------HTTCBCCCCCTTTS-SCTTCT-------
T ss_pred ----------------------------------------------------hccCccCCCCCccc-cCCCCC-------
Confidence 0000000 012111 112211
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~ 354 (472)
..++..++|||+++||++.+.|++++.+++++|+|++...+.... ....+...+++
T Consensus 249 --------------------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~ 308 (437)
T 2gqd_A 249 --------------------GRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQ 308 (437)
T ss_dssp --------------------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHH
T ss_pred --------------------CCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHH
Confidence 135556999999999999999999999999999999987663221 12334578999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||++||++++|||+||+|++++.. +.+++++++.. |.+. .++ +++++.+..+||+.+|+|+.+++
T Consensus 309 ~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~-fg~~-------~~~-----~~v~s~k~~~GH~~gAaG~~~li 375 (437)
T 2gqd_A 309 AAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNT-FGEA-------AKH-----LKVSSTKSMTGHLLGATGGIEAI 375 (437)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HGGG-------GTS-----CEEECTHHHHCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHH-Hhcc-------CCC-----ceeecchhhhcCChhhhhHHHHH
Confidence 9999999999999999999999974 66666666521 3211 122 44444445589999999999999
Q ss_pred HHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++++||+++. .+++++++++.||.++++||++.
T Consensus 376 ~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 376 FSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp HHHHHHHHTEECCBTTCCSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEECC
T ss_pred HHHHHHhcCCCCCCCCCCCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEEec
Confidence 9999999752 25788889999999999999985
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-32 Score=282.18 Aligned_cols=280 Identities=18% Similarity=0.201 Sum_probs=207.8
Q ss_pred CHHHHHHHHHHHHHHHcCC-CcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHc
Q psy1213 70 MAHELARHSLIGILQKTGI-SKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSA 118 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi-~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~l 118 (472)
...+|+++|+++||+|+|+ +++++| +|++|+..+.. ....++.+++..+
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 3568999999999999999 999888 68998765431 0125788999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ ++|+++|+++|+|+++||++|+++|++|++|++||+|+|.++..+.. ..+. .
T Consensus 167 gl--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~------~~~~----------------~-- 220 (431)
T 2ix4_A 167 GF--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSV------AGFS----------------R-- 220 (431)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHH------HHHH----------------H--
T ss_pred CC--CCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHH------HHHH----------------h--
Confidence 99 47999999999999999999999999999999999999987542110 0000 0
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccC
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~ 278 (472)
++.++ .+|+.+ |.... +||+.
T Consensus 221 -------------------~~~ls----~~~~~~----------------------------~~~~~-~pfd~------- 241 (431)
T 2ix4_A 221 -------------------SRALS----TKFNSS----------------------------PQEAS-RPFDC------- 241 (431)
T ss_dssp -------------------TTCBC----CTTTTC----------------------------GGGSC-CTTBT-------
T ss_pred -------------------ccccC----ccccCC----------------------------ccccc-ccCCC-------
Confidence 00000 001111 11110 12211
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~ 354 (472)
..++..++|||+++||++++.|++++.+++++|+|++...+.... ....+...+++
T Consensus 242 --------------------~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~ 301 (431)
T 2ix4_A 242 --------------------DRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMT 301 (431)
T ss_dssp --------------------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHH
T ss_pred --------------------CCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHH
Confidence 135556999999999999999999999999999999987642111 12345678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||+++|++++|||++|+|+++|. .+.++++++... |++... +++ +++++++..+|||.||+|+.+++
T Consensus 302 ~al~~agl~~~dId~ve~HgtgT~~~D~~E~~al~~~-~~~~~~-----~~~-----~~v~s~k~~~GH~~gAsG~~~li 370 (431)
T 2ix4_A 302 RALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTV-FSEHAT-----SGT-----LAFSSTKGATGHLLGAAGAVEAI 370 (431)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HTHHHH-----TSC-----SEEECTHHHHCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHH-Hccccc-----CCC-----ceeecchhhhcccHHHHHHHHHH
Confidence 999999999999999999999996 356666666522 433221 122 45556777899999999999999
Q ss_pred HHHHHHhhcc----------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 434 HAANRLVRED----------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 434 e~v~qL~~~~----------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++++||+++. .+++++++++.||.++++||++
T Consensus 371 ~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 371 FSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp HHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHhcCCcCCCCCCCCCCCCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 9999999752 2578888999999999999986
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-31 Score=275.85 Aligned_cols=272 Identities=20% Similarity=0.201 Sum_probs=203.3
Q ss_pred CHHHHHHHHHHHHHHHcCC-CcCccC----EEEEEeecCC--------------------------CCCChHHHHHHHHc
Q psy1213 70 MAHELARHSLIGILQKTGI-SKDLID----YIVYGTVIQE--------------------------VKTSNIGREAALSA 118 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi-~~~~Id----~vi~g~~~~~--------------------------~~~~~~a~~ia~~l 118 (472)
...+|+++|+++||+|+|+ ++++|| ++++|+..+. ...+.++.+++..+
T Consensus 76 ~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (412)
T 4ewg_A 76 RVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFW 155 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHh
Confidence 3677999999999999999 788888 8888876532 11245788999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ ++|+++|+++|+|+++||++|+++|++|++|++||+|+|.++..+.. .+. ..
T Consensus 156 gl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~-------~~~----------------~~- 209 (412)
T 4ewg_A 156 DL--KGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVA-------VFD----------------TL- 209 (412)
T ss_dssp TC--CSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-------HHH----------------TT-
T ss_pred CC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHH-------HHH----------------Hh-
Confidence 99 47999999999999999999999999999999999999986532111 000 00
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC--CccceeccceeeccCCCc
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD--ILPIQVGDKTISKDNGVR 276 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~--~~P~a~~~~~~~~de~~~ 276 (472)
+.+.+ ..|... .+||+.+
T Consensus 210 -------------------------------------------------------~~l~~~~~~p~~~-~rpfd~~---- 229 (412)
T 4ewg_A 210 -------------------------------------------------------YATSTRNDEPHLT-PRPFDAK---- 229 (412)
T ss_dssp -------------------------------------------------------TCBCCCTTCGGGC-CCTTBTT----
T ss_pred -------------------------------------------------------hccccCCCCCCCC-CCCCCCC----
Confidence 00000 011110 0222211
Q ss_pred cCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc--ccccccHHHHHH
Q psy1213 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK--DQLLLGPAYATP 354 (472)
Q Consensus 277 ~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~--~~~~~~~~~a~~ 354 (472)
.++..++|||+++||++++.|++++.+++++|+|++...+... .+...+...+++
T Consensus 230 -----------------------~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~ 286 (412)
T 4ewg_A 230 -----------------------RDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQ 286 (412)
T ss_dssp -----------------------CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHH
T ss_pred -----------------------CCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHH
Confidence 2455589999999999999999999999999999998765221 112345678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||++||++++|||++|+|++++.. +..+++++... |. +++| |+. .+..+|||.||+|+.+++
T Consensus 287 ~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-~~----------~~~~---v~s--~K~~~GH~~gAsG~~~~~ 350 (412)
T 4ewg_A 287 LALEDAKLDANAIAYVNAHGTSTDRGDVAESQATART-FG----------ERMP---ISS--LKSYVGHTLGACGALEAW 350 (412)
T ss_dssp HHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHH-HC----------TTCE---EEC--THHHHCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHH-cC----------CCCe---eeC--ccccccccHHHHHHHHHH
Confidence 9999999999999999999999963 44555555421 21 1244 554 333469999999999999
Q ss_pred HHHHHHhhc----------------------------cCCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVRE----------------------------DGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~----------------------------~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++++|+++ ..++.++++++.||.++++||++.
T Consensus 351 ~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 351 WTIEMMKRNWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp HHHHHHHHTEECCCTTCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred HHHHHHhcCCcCCCCCCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence 999999874 125778889999999999999986
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=274.75 Aligned_cols=276 Identities=17% Similarity=0.149 Sum_probs=205.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC--------------------------CChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK--------------------------TSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~--------------------------~~~~a~~ia~~lG 119 (472)
+..+|+++|+++||+|+|+++++|| ++++|+..+++. .+.++.+++..+|
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 170 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFK 170 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcC
Confidence 5788999999999999999999999 788887654321 2357889999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ .+|+++|+++|+|+++||++|+++|++|++|++||+|+|.++..+... +.. +.
T Consensus 171 l--~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~-------~~~----------~~------- 224 (428)
T 3mqd_A 171 I--KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVL-------FDA----------MG------- 224 (428)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-------HHH----------TT-------
T ss_pred C--CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHH-------HHH----------hh-------
Confidence 9 579999999999999999999999999999999999999976422110 000 00
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t 279 (472)
.+ +++. ...|... .+||+.+
T Consensus 225 -~l-----------------------------s~~~----------------------~~~p~~~-~rpfd~~------- 244 (428)
T 3mqd_A 225 -AM-----------------------------SSKY----------------------NDTPSTA-SRAYDKN------- 244 (428)
T ss_dssp -CB-----------------------------CCTT----------------------TTSGGGS-CCTTBTT-------
T ss_pred -hh-----------------------------cccc----------------------cCCcccc-cCcccCC-------
Confidence 00 0000 0011111 1222211
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--cccccHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--QLLLGPAYATPQVL 357 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~~~~~~~~a~~~Al 357 (472)
.+|. .++|||+++||++++.|+++|.+++++|+|++...+.... +...++..++++||
T Consensus 245 -------------~~G~-------v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al 304 (428)
T 3mqd_A 245 -------------RDGF-------VIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMAL 304 (428)
T ss_dssp -------------CCSB-------CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHH
T ss_pred -------------CCCc-------ccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHH
Confidence 2233 4899999999999999999999999999999998753321 13456789999999
Q ss_pred HHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
+ |++ +|||+||+|+++|. .+.++++++... |... ...+++++.+..+|||.||+|+.+++.++
T Consensus 305 ~--gl~-~dId~ve~HgtgT~~~D~~E~~al~~~-~~~~------------~~~~~v~s~K~~~GH~~gAsG~~~~i~~~ 368 (428)
T 3mqd_A 305 S--TVT-SKIDYINPHATSTPAGDAPEIEAIRQI-FGAG------------DVCPPIAATKSLTGHSLGATGVQEAIYSL 368 (428)
T ss_dssp T--TCC-SCCCEEECCCCSCHHHHHHHHHHHHHH-HCSG------------GGSCCBCCTHHHHCBCGGGHHHHHHHHHH
T ss_pred h--CCc-cccCEEEEeCCCCCCcCHHHHHHHHHH-hccc------------CCCceeecchhhhcccHHHHHHHHHHHHH
Confidence 9 999 99999999999995 466666665421 2210 11145556666689999999999999999
Q ss_pred HHHhhc----------------------------cCCcchhhhhccCcceeEEEEEeCC
Q psy1213 437 NRLVRE----------------------------DGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 437 ~qL~~~----------------------------~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
++|+++ ..++.++++++.||.++++||++.+
T Consensus 369 ~~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 369 LMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp HHHHHTEECCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHhCCcCCCCCCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEeecC
Confidence 999864 1246778899999999999999865
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-31 Score=271.86 Aligned_cols=272 Identities=16% Similarity=0.116 Sum_probs=202.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
...+|+++|+++||+|+|+++++|| +|++|+..+++ ..+.++.+++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 4678999999999999999999999 89998764432 13567889999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeeccc-CCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM-SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
+ ++|+++|+++|+|+++||++|+++|++| +|++||+|+|.+ +...+. .+. .
T Consensus 158 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~-------~~~----------------~-- 209 (415)
T 1tqy_B 158 M--RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWV-------SQI----------------A-- 209 (415)
T ss_dssp C--CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHH-------HHH----------------T--
T ss_pred C--CCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHH-------HHH----------------h--
Confidence 9 4799999999999999999999999999 999999999983 321100 000 0
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCcc
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRV 277 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~ 277 (472)
.+.+.. .+|... .++|+.
T Consensus 210 ------------------------------------------------------~~~ls~~~~~~~~-~~pfd~------ 228 (415)
T 1tqy_B 210 ------------------------------------------------------SGRISTATDPDRA-YLPFDE------ 228 (415)
T ss_dssp ------------------------------------------------------TSCBCCCSCGGGS-CCTTST------
T ss_pred ------------------------------------------------------ccCccCCCCCCCC-cCCCCC------
Confidence 000000 001110 012211
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCC-CCcEEEEEeEEeccCCcc--cccccHHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGL-KPKAYLRDFVYVSQDPKD--QLLLGPAYATP 354 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~-~~~a~I~g~~~~~~~p~~--~~~~~~~~a~~ 354 (472)
..+++.++|||+++||++.+.|++++. +++++|.|++...+.... +.. +...+++
T Consensus 229 ---------------------~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~-~~~~ai~ 286 (415)
T 1tqy_B 229 ---------------------RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA-GLERAIR 286 (415)
T ss_dssp ---------------------TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC-SHHHHHH
T ss_pred ---------------------CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH-HHHHHHH
Confidence 135566999999999999999999999 999999999987653221 112 6789999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||+++|++++|||++|+|++++.. +.++++++... |++. .+| |+... ..+|||.||+|+.+++
T Consensus 287 ~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-~g~~---------~~~---v~s~K--~~~GH~~gAaG~~~~~ 351 (415)
T 1tqy_B 287 LALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRV-FGRE---------GVP---VTVPK--TTTGRLYSGGGPLDVV 351 (415)
T ss_dssp HHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHH-HCTT---------CSE---EECGG--GGTCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHH-hCCC---------Cce---Eeccc--hhhccChHHHHHHHHH
Confidence 9999999999999999999999952 44445444421 3111 134 54332 2379999999999999
Q ss_pred HHHHHHhhc---------------------------cCCcchhhhhccCcceeEEEEEeCC
Q psy1213 434 HAANRLVRE---------------------------DGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 434 e~v~qL~~~---------------------------~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+++++|+++ ..+++++++++.||.++++||++.+
T Consensus 352 ~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 352 TALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRFA 412 (415)
T ss_dssp HHHHHHHHTSBCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC-
T ss_pred HHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCCCEEEEecCcCCCeEEEEEEecCC
Confidence 999999974 2357888999999999999999865
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=275.71 Aligned_cols=276 Identities=17% Similarity=0.170 Sum_probs=204.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCc-CccC----EEEEEeecCCC--------------------------CCChHHHHHHHHc
Q psy1213 70 MAHELARHSLIGILQKTGISK-DLID----YIVYGTVIQEV--------------------------KTSNIGREAALSA 118 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~-~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~l 118 (472)
...+|+++|+++||+|+|+++ ++|| +|++|+..++. ....++.+++..+
T Consensus 96 ~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (438)
T 2iwz_A 96 SPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence 356799999999999999998 8888 69999865542 1235788999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ ++|+++|+++|+|++.||++|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 176 gl--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~-----~~~~------------------- 228 (438)
T 2iwz_A 176 KL--KGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLSL-----AGFS------------------- 228 (438)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHH-----HHHH-------------------
T ss_pred CC--CCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHHH-----HHHH-------------------
Confidence 99 4699999999999999999999999999999999999997432 2110 0000
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCcc
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRV 277 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~ 277 (472)
+.+.+.. .+|... .+||+.+
T Consensus 229 -----------------------------------------------------~~~~ls~~~~p~~~-~~pfd~~----- 249 (438)
T 2iwz_A 229 -----------------------------------------------------RARALSTNSDPKLA-CRPFHPK----- 249 (438)
T ss_dssp -----------------------------------------------------HTTCBCCCSCTTTS-CCTTCTT-----
T ss_pred -----------------------------------------------------hcCCcCCCCCCCcc-cccCCCC-----
Confidence 0000000 012111 1122211
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYAT 353 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~ 353 (472)
.++..++|||+++||++.+.|++++.+++++|+|++...+.... ....+...++
T Consensus 250 ----------------------~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai 307 (438)
T 2iwz_A 250 ----------------------RDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCM 307 (438)
T ss_dssp ----------------------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHH
T ss_pred ----------------------CCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHH
Confidence 23445999999999999999999999999999999987653211 1234567899
Q ss_pred HHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHH
Q psy1213 354 PQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLT 432 (472)
Q Consensus 354 ~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v 432 (472)
++||++||++++|||++|+|++++.. +.+++++|... |.+. .++ +++++.+..+||+.+|+|+.++
T Consensus 308 ~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~-fg~~-------~~~-----~~v~s~K~~~GH~~gAaG~~~l 374 (438)
T 2iwz_A 308 AAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHL-FKDH-------AYA-----LAVSSTKGATGHLLGAAGAVEA 374 (438)
T ss_dssp HHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HGGG-------GGT-----SEEECCHHHHCBCGGGHHHHHH
T ss_pred HHHHHHcCCCHHHcCEEEecCCCCcccCHHHHHHHHHH-Hhcc-------CCC-----cceecchhhhcCCHHHHHHHHH
Confidence 99999999999999999999999974 55555555421 3221 122 4444444457999999999999
Q ss_pred HHHHHHHhhcc------------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 433 VHAANRLVRED------------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 433 ~e~v~qL~~~~------------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++++||+++. .+++++++++.||.++++||++.
T Consensus 375 i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 375 AFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp HHHHHHHHHTEECCBTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHHhcCccCCCCCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEeeC
Confidence 99999999752 35778889999999999999873
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-31 Score=272.75 Aligned_cols=274 Identities=15% Similarity=0.130 Sum_probs=206.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
...+|+++|+++||+|+|+++++|| ++++++..++. ....++.+++..+|
T Consensus 92 ~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 171 (430)
T 1ox0_A 92 NYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFG 171 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhc
Confidence 3568999999999999999999999 68888765431 01246788999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ .+|+++|+++|+|+++||++|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 172 l--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~-----~~~~-------------------- 223 (430)
T 1ox0_A 172 A--NGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PFAI-----AGFQ-------------------- 223 (430)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHH-----HHHH--------------------
T ss_pred C--CCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHH-----HHHH--------------------
Confidence 9 4799999999999999999999999999999999999998532 1100 0000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceeccceeeccCCCccC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~~~~~~de~~~~~ 278 (472)
+.+.+. ...|... .+||+.
T Consensus 224 ----------------------------------------------------~~~~ls~~~~p~~~-~~pFd~------- 243 (430)
T 1ox0_A 224 ----------------------------------------------------ALTALSTTEDPTRA-SIPFDK------- 243 (430)
T ss_dssp ----------------------------------------------------HTTCBCCCSSTTSS-SCTTBT-------
T ss_pred ----------------------------------------------------hCCCccCCCCCCCC-CCCCCC-------
Confidence 000000 0011111 012211
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~ 354 (472)
..+++.++|||+++||++.+.|+++|.+++++|+|++...+.... ....+...+++
T Consensus 244 --------------------~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~ 303 (430)
T 1ox0_A 244 --------------------DRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIK 303 (430)
T ss_dssp --------------------TCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHH
T ss_pred --------------------CCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHH
Confidence 135566999999999999999999999999999999887652111 12345678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||+++|++++|||++|+|++++.. +..+.+++... +++++| ||..++. +|||.||+|+.+++
T Consensus 304 ~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-----------~g~~~~---v~s~k~~--~GH~~gAaG~~~~i 367 (430)
T 1ox0_A 304 LALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAV-----------LGKEVP---VSSTKSF--TGHLLGAAGAVEAI 367 (430)
T ss_dssp HHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHH-----------HCSSSE---EECTHHH--HCBCGGGHHHHHHH
T ss_pred HHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHH-----------hCCCce---ecccccc--cccchhhHHHHHHH
Confidence 9999999999999999999999975 34444444310 123466 8888887 79999999999999
Q ss_pred HHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeCC
Q psy1213 434 HAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 434 e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
++++||+++. .+++++++++.||.++++||++.+
T Consensus 368 ~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 368 VTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp HHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEeecC
Confidence 9999999752 257888899999999999999864
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=268.53 Aligned_cols=271 Identities=18% Similarity=0.190 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHcCCC---cCccCEEEEEeecCCCC--------------------------CChHHHHHHHHcCCC
Q psy1213 71 AHELARHSLIGILQKTGIS---KDLIDYIVYGTVIQEVK--------------------------TSNIGREAALSAGFS 121 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~---~~~Id~vi~g~~~~~~~--------------------------~~~~a~~ia~~lGl~ 121 (472)
..+|+++|+++||+|+|++ +++| .|++|+..+++. ...++.+++..+|+
T Consensus 99 ~~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl- 176 (434)
T 2gp6_A 99 LQRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA- 176 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC-
Confidence 4689999999999999983 3334 588887655430 12467899999999
Q ss_pred CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCC
Q psy1213 122 DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDF 201 (472)
Q Consensus 122 ~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (472)
++|+++|+++|+|+++||++|+++|++|++|++||+|+|.++..... ..+. .
T Consensus 177 -~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~------~~~~----------------~----- 228 (434)
T 2gp6_A 177 -KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPI------AGFA----------------Q----- 228 (434)
T ss_dssp -CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHH------HHHH----------------T-----
T ss_pred -CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHH------HHHH----------------H-----
Confidence 48999999999999999999999999999999999999987541000 0000 0
Q ss_pred CCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcC-CCCC--CccceeccceeeccCCCccC
Q psy1213 202 FIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKG-YLTD--ILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g-~~~~--~~P~a~~~~~~~~de~~~~~ 278 (472)
.+ .+.. .+|... .+||+.
T Consensus 229 ---------------------------------------------------~~~~ls~~~~~p~~~-~~pfd~------- 249 (434)
T 2gp6_A 229 ---------------------------------------------------MRIVMSTNNDDPAGA-CRPFDR------- 249 (434)
T ss_dssp ---------------------------------------------------TTSSCCCCTTCTTTS-CCSSBT-------
T ss_pred ---------------------------------------------------HHHHhcCCCCCCCCc-eecccc-------
Confidence 00 0000 011110 122221
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~ 354 (472)
..++..++|||+++||++.+.|++++.+++++|+|++...+.... ....+...+++
T Consensus 250 --------------------~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~ 309 (434)
T 2gp6_A 250 --------------------DRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAIT 309 (434)
T ss_dssp --------------------TCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHH
T ss_pred --------------------cCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHH
Confidence 134556999999999999999999999999999999987642111 12335678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||+++|++++|||++|+|.+.+.. +.+++++|+.. | +++ + +|++|++..+|||.||+|+.+++
T Consensus 310 ~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-f----------g~~-~---~~v~s~k~~~GH~~gAaG~~~~i 374 (434)
T 2gp6_A 310 RAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNA-L----------GGN-R---PAVYAPKSALGHSVGAVGAVESI 374 (434)
T ss_dssp HHHHHTTCCTTTEEEEECCCCSCHHHHHHHHHHHHHH-H----------TTC-C---CEECCTHHHHCBCTTTHHHHHHH
T ss_pred HHHHHcCCCHHHcCEEEEeCCcCccchHHHHHHHHHH-h----------ccC-C---CCcccchhhhcCchhhhHHHHHH
Confidence 9999999999999999999776643 56667666521 2 111 3 89999999999999999999999
Q ss_pred HHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 434 HAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 434 e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++++||+++. .+++++++++.||.++++||++
T Consensus 375 ~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 375 LTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp HHHHHHHHSCCCCCSSCSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHhcCccCCCCCCCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 9999999862 2578888999999999999986
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=272.47 Aligned_cols=276 Identities=17% Similarity=0.171 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC---------------------------CCh-HHH----HH
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK---------------------------TSN-IGR----EA 114 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~---------------------------~~~-~a~----~i 114 (472)
..+|+++++++||+|+|+++++|| +|++|+..+++. .++ .+. ++
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 567999999999999999999999 699998765320 011 134 89
Q ss_pred HHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhh
Q psy1213 115 ALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLL 194 (472)
Q Consensus 115 a~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (472)
+..+|+ ++|+++|+++|+|+++||++|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 153 a~~lgl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~-----~~~~--------------- 209 (424)
T 1tqy_A 153 AWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PIVV-----ACFD--------------- 209 (424)
T ss_dssp HHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHH-----HHHH---------------
T ss_pred HHhcCC--CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HHHH-----HHHH---------------
Confidence 999999 4799999999999999999999999999999999999998532 1100 0000
Q ss_pred hccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC--Cccceeccceeecc
Q psy1213 195 ATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD--ILPIQVGDKTISKD 272 (472)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~--~~P~a~~~~~~~~d 272 (472)
. .+.+.+ .+|... .+||+.+
T Consensus 210 ---------------------------------~------------------------~~~ls~~~~~p~~~-~rpfd~~ 231 (424)
T 1tqy_A 210 ---------------------------------A------------------------IRATTARNDDPEHA-SRPFDGT 231 (424)
T ss_dssp ---------------------------------H------------------------TTCBCCCCSCGGGC-CCTTBTT
T ss_pred ---------------------------------h------------------------hccccCCCCCCCCC-ccCCCCC
Confidence 0 000000 022221 1222211
Q ss_pred CCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----ccccc
Q psy1213 273 NGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLG 348 (472)
Q Consensus 273 e~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~ 348 (472)
.++..++|||+++||++.+.|+++|.+++++|+|++...+.... ....+
T Consensus 232 ---------------------------~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~ 284 (424)
T 1tqy_A 232 ---------------------------RDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGRE 284 (424)
T ss_dssp ---------------------------CCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHH
T ss_pred ---------------------------CCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHH
Confidence 35566999999999999999999999999999999987653211 12234
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCc
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAAT 427 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gas 427 (472)
...++++||+++|++++|||++|+|++++.. +.++++++... |.++ .+++| |+ +.+..+||+.+|+
T Consensus 285 ~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~-f~~~-------~~~~~---v~--s~k~~~GH~~~Aa 351 (424)
T 1tqy_A 285 MAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRA-LGEH-------ARRTP---VS--SIKSMVGHSLGAI 351 (424)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHH-TGGG-------GGGSC---EE--CTHHHHCBCTTTH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCHHHHHHHHHH-hccc-------CCCCe---ee--ccccccccChhhh
Confidence 5789999999999999999999999999963 55555555421 3221 12234 43 3334479999999
Q ss_pred HHHHHHHHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeCC
Q psy1213 428 GVRLTVHAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 428 G~~~v~e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
|+.+++++++||+++. .+++++++++.||.++++||++.+
T Consensus 352 G~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 352 GSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp HHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred HHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEccccCCceEEEEEEccCC
Confidence 9999999999999752 367888999999999999999864
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=265.37 Aligned_cols=271 Identities=18% Similarity=0.185 Sum_probs=202.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccCE-----EEEEeecCCC---------------------------CCChHHHHHHHH
Q psy1213 70 MAHELARHSLIGILQKTGISKDLIDY-----IVYGTVIQEV---------------------------KTSNIGREAALS 117 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id~-----vi~g~~~~~~---------------------------~~~~~a~~ia~~ 117 (472)
...+|+++++++||+|+|+++++||. |++|+..++. ....++.+++..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 36789999999999999999988885 9999876542 023567899999
Q ss_pred cCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhcc
Q psy1213 118 AGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATI 197 (472)
Q Consensus 118 lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (472)
+|+ .+|+++|+++|+|++.||++|+++|++|++|++||+|+|.++.. .. . . |.
T Consensus 150 lgl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~-~~----~-~-~~------------------ 202 (406)
T 2vba_A 150 FKI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE-MA----C-E-FD------------------ 202 (406)
T ss_dssp TTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH-HH----H-H-HH------------------
T ss_pred ccC--CCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccCh-HH----H-H-Hh------------------
Confidence 999 47999999999999999999999999999999999999987531 00 0 0 00
Q ss_pred CCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC---CccceeccceeeccCC
Q psy1213 198 RPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD---ILPIQVGDKTISKDNG 274 (472)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~---~~P~a~~~~~~~~de~ 274 (472)
+. |.+.. .+|... .+||+.+
T Consensus 203 ------------------------------~~------------------------~~ls~~~~~~p~~~-~~pfd~~-- 225 (406)
T 2vba_A 203 ------------------------------AM------------------------GALSTKYNDTPEKA-SRTYDAH-- 225 (406)
T ss_dssp ------------------------------HT------------------------TCBCCSCTTSGGGS-CCTTBTT--
T ss_pred ------------------------------hc------------------------cccccccCCCCccc-cCcCcCC--
Confidence 00 00000 012111 1233211
Q ss_pred CccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--cccccHHHH
Q psy1213 275 VRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--QLLLGPAYA 352 (472)
Q Consensus 275 ~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~~~~~~~~a 352 (472)
.++..++|||+++||++.+.|+++|.+++++|+|++...+.... +...+...+
T Consensus 226 -------------------------~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~a 280 (406)
T 2vba_A 226 -------------------------RDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRC 280 (406)
T ss_dssp -------------------------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHH
T ss_pred -------------------------CCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHH
Confidence 24445899999999999999999999999999999987653211 113456889
Q ss_pred HHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc-ccCCCCCcHHH
Q psy1213 353 TPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS-IGHPFAATGVR 430 (472)
Q Consensus 353 ~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a-~Ghp~gasG~~ 430 (472)
+++||+++| +|||++|+|+++|.. +.+++++|... |.+ .++| | |+.++ +||+.+|+|+.
T Consensus 281 i~~al~~ag---~dId~ve~HgtgT~~gD~~E~~al~~~-fg~---------~~~~---v---~s~K~~~GH~~gAaG~~ 341 (406)
T 2vba_A 281 MKMAMHGVD---TPIDYLNSHGTSTPVGDVKELAAIREV-FGD---------KSPA---I---SATKAMTGHSLGAAGVQ 341 (406)
T ss_dssp HHHHHTTCC---SCCCEEECCCCSCHHHHHHHHHHHHHH-HTT---------CCCE---E---ECTHHHHCBCGGGHHHH
T ss_pred HHHHHhhCC---CCccEEEeeCccCcccCHHHHHHHHHH-hCc---------CCCc---e---eCchhhhcccHHHHHHH
Confidence 999999999 999999999999974 66777776521 211 0122 3 44455 89999999999
Q ss_pred HHHHHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 431 LTVHAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 431 ~v~e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
+++++++||+++. .+++++++++.||.++++||++.+|
T Consensus 342 ~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~~~ 406 (406)
T 2vba_A 342 EAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLKD 406 (406)
T ss_dssp HHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC--
T ss_pred HHHHHHHHHhcCccCCCCCCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEeCCC
Confidence 9999999999753 2467888999999999999998764
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-30 Score=254.78 Aligned_cols=290 Identities=16% Similarity=0.108 Sum_probs=217.5
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
+.|.++++|+|++.++++.+.+... +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.|++++
T Consensus 3 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~ 80 (313)
T 1zow_A 3 VGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISK--MTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVAT 80 (313)
T ss_dssp EEEEEEEEECCSCEEEGGGGGGTSSCCHHHHHH--HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred eEEEEEEEECCCccccHHHHHHhcCCCHHHHHH--hhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 4689999999999999988776432 446644 788888766567889999999999999999999999999999998
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHh
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~ 180 (472)
..+++..++++..++..+|++ .+++++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 81 ~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~------------- 146 (313)
T 1zow_A 81 ATGDMPFPTVANMLQERLGTG-KVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKIT------------- 146 (313)
T ss_dssp SSCSCSSSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTC-------------
T ss_pred CCCCCCCCcHHHHHHHHhCCC-CCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccccccc-------------
Confidence 887766678899999999996 589999999999999999999999999999999999999865310
Q ss_pred hccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCc
Q psy1213 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDIL 260 (472)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~ 260 (472)
.
T Consensus 147 -------------------------------------------------------------------------------~ 147 (313)
T 1zow_A 147 -------------------------------------------------------------------------------D 147 (313)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEE-EEEeEEecc
Q psy1213 261 PIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY-LRDFVYVSQ 339 (472)
Q Consensus 261 P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~-I~g~~~~~~ 339 (472)
|+. . .++..++|||+|+||++.+. +.+++.. +.+.+...+
T Consensus 148 ~~d----------------~-------------------~~~~~~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~ 188 (313)
T 1zow_A 148 LTD----------------R-------------------STAVLFGDGAGAVIIGEVSE----GRGIISYEMGSDGTGGK 188 (313)
T ss_dssp TTC----------------H-------------------HHHTTBCEEEEEEEEEECST----TCEEEEEEEEECGGGGG
T ss_pred ccc----------------c-------------------cceeeeccceEEEEEEecCC----CCceeEEEEEEcCCCcC
Confidence 000 0 01223799999999987543 1111111 222221111
Q ss_pred C---Cc----ccc-c--------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccC
Q psy1213 340 D---PK----DQL-L--------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403 (472)
Q Consensus 340 ~---p~----~~~-~--------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~ 403 (472)
. |. ..+ . .....+++++|+++|++++|||+|++|.+++.......+.||
T Consensus 189 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg--------------- 253 (313)
T 1zow_A 189 HLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLG--------------- 253 (313)
T ss_dssp GEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHT---------------
T ss_pred eEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhC---------------
Confidence 0 00 000 0 123578999999999999999999999999987666677887
Q ss_pred CCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 404 G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+|.+++..+ +..+||+.+|++...+.+++++-+-+.+++.|..+++.|....++||+-
T Consensus 254 --~~~~~~~~~--~~~~Gh~~~as~~~~L~~~~~~~~~~~g~~vl~~~~G~G~t~~~~~l~~ 311 (313)
T 1zow_A 254 --ISKDKMSVS--VNKYGNTSAASIPLSIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIKW 311 (313)
T ss_dssp --CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --CCHHHHHHh--HhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 333333322 3468999999999999998877544567888888777666777788763
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-29 Score=277.41 Aligned_cols=278 Identities=17% Similarity=0.192 Sum_probs=210.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCCC------------------ChHHHHHHHHcCCCCCCcee
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVKT------------------SNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~~------------------~~~a~~ia~~lGl~~~~~~~ 127 (472)
+..+|+++++++||+|+|+++++|| +|++|+..+++.. ..++.+++..+|+ ++|++
T Consensus 94 p~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 171 (915)
T 2qo3_A 94 PQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGL--EGPSI 171 (915)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTB--CSCEE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCC--CCCEE
Confidence 3567999999999999999999999 4999987666421 1367899999999 47999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+|+++|+|++.||++|++.|++|++|++||+|+|.++... .. ..+.
T Consensus 172 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~-~~-----~~~~---------------------------- 217 (915)
T 2qo3_A 172 SVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPG-VF-----VDFS---------------------------- 217 (915)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTH-HH-----HHHH----------------------------
T ss_pred EECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHH-HH-----HHHh----------------------------
Confidence 9999999999999999999999999999999999875411 00 0000
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCC
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLK 287 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~ 287 (472)
+.+.+ .|... .++|+.+
T Consensus 218 --------------------------------------------~~~~l---s~~g~-~~~Fd~~--------------- 234 (915)
T 2qo3_A 218 --------------------------------------------RQRAL---AADGR-SKAFGAG--------------- 234 (915)
T ss_dssp --------------------------------------------TTTCB---CSSCC-CCTTBTT---------------
T ss_pred --------------------------------------------hhccc---CCCCC-cccccCC---------------
Confidence 00000 01000 1222211
Q ss_pred CcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHHHHHHHcCCC
Q psy1213 288 PAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATPQVLERAGLS 363 (472)
Q Consensus 288 p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~Al~~Agl~ 363 (472)
.++..++||++++||++.+.|+++|.+++++|+|++...+.... +...+...++++||++||++
T Consensus 235 ------------adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~ 302 (915)
T 2qo3_A 235 ------------ADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLE 302 (915)
T ss_dssp ------------CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCC
T ss_pred ------------CCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 24555999999999999999999999999999999987653211 11234578999999999999
Q ss_pred cCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc
Q psy1213 364 LSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE 442 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~ 442 (472)
++|||++|+|+++|.. +..+.++|... |.. ...++.| +|+++++..+||+.+|+|+.+++++++||+++
T Consensus 303 p~dId~ve~HgtgT~~gD~~E~~al~~~-f~~------~~~~~~~---~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~ 372 (915)
T 2qo3_A 303 PGDVDAVEAHGTGTALGDPIEANALLDT-YGR------DRDADRP---LWLGSVKSNIGHTQAAAGVTGLLKVVLALRNG 372 (915)
T ss_dssp GGGCCEEECCCCCCTTTHHHHHHHHHHH-TSS------SCCTTSC---EEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHCcEEEecCCCCccCCHHHHHHHHHH-hcc------ccCCCCc---ccccCcccceeCCccccchHHHHHHHHHHhcC
Confidence 9999999999999964 55555544311 110 0112234 89999999999999999999999999999874
Q ss_pred c-----------------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 443 D-----------------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 443 ~-----------------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
. .+++++++++.||.|+++||+..|.
T Consensus 373 ~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~ 433 (915)
T 2qo3_A 373 ELPATLHVEEPTPHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAPE 433 (915)
T ss_dssp EECCCSSCSSBCTTSCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECCC
T ss_pred CCCCCCCCCCCCcccccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeeccc
Confidence 1 1467888999999999999998764
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=249.79 Aligned_cols=284 Identities=15% Similarity=0.075 Sum_probs=212.2
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
+.|.+++.|+|++.++++.+.+... +.||.. ++++.+|+... +.+..+|+.+|+++||+++|+++++||.|++++
T Consensus 3 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~r~~~~-~~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~ 79 (309)
T 2ebd_A 3 TKIIGTGVYLPKNVLTNFDLEKIVDTSDEWITT--RTGIKERRIAK-EETITYMATQAAKEALREANLSPEELDLIILAT 79 (309)
T ss_dssp EEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHH--HHCCCEEEECS-SCCHHHHHHHHHHHHHHHHTCCGGGCSEEEEEC
T ss_pred eEEEEEEEECCCceEcHHHHHHHcCCCHHHHHH--HhCceeeeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 5699999999999998887765532 334433 56666554322 378999999999999999999999999999999
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHh
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~ 180 (472)
..++...++++..++..+|++ ..++++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 80 ~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~------------- 145 (309)
T 2ebd_A 80 LTPQKRFPSTACLVQAQLKAK-GVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAV------------- 145 (309)
T ss_dssp SSCSSSSSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGTC-------------
T ss_pred CCCCCCCCcHHHHHHHHhCCC-CceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEeccccccc-------------
Confidence 887766678999999999996 469999999999999999999999999999999999999864210
Q ss_pred hccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCc
Q psy1213 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDIL 260 (472)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~ 260 (472)
+
T Consensus 146 -------------------------------------------------------------------------------~ 146 (309)
T 2ebd_A 146 -------------------------------------------------------------------------------D 146 (309)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc-
Q psy1213 261 PIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ- 339 (472)
Q Consensus 261 P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~- 339 (472)
|. + ..++...+|||+|+||++.+.++ .|.+....++
T Consensus 147 ~~---------~--------------------------~~~~~~~gdGaaA~vL~~~~~~~--------~i~~~~~~~~g 183 (309)
T 2ebd_A 147 WE---------D--------------------------RSTCVLFGDGAGAVVVTRSEDKS--------DILATRMYAEG 183 (309)
T ss_dssp TT---------C--------------------------TTTTTTBCEEEEEEEEEECSSSC--------EEEEEEEEECG
T ss_pred cc---------c--------------------------hhhccccccccEEEEEEecCCCC--------ceeEEEEEecC
Confidence 00 0 01234489999999999765321 1233222111
Q ss_pred -------CCc-cc-ccc----------cHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCC
Q psy1213 340 -------DPK-DQ-LLL----------GPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRS 400 (472)
Q Consensus 340 -------~p~-~~-~~~----------~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~ 400 (472)
.|. .. ... ....+++++|+++|++++|||++++|++++.......+.|| +
T Consensus 184 ~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~lg---~-------- 252 (309)
T 2ebd_A 184 SLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLN---I-------- 252 (309)
T ss_dssp GGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHHTT---C--------
T ss_pred CccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhC---C--------
Confidence 010 00 001 23678999999999999999999999999986666678888 2
Q ss_pred ccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 401 SKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 401 ~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
+.+++..+ +..+||+.+|++...+.+++++=+-+.|++.|..+++.|....+++|+
T Consensus 253 ------~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~~g~~~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 253 ------PKEKVFVN--IQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ------CGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred ------CHHHhhhh--HhhhcchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEE
Confidence 33333222 346899999999999999988643346788888777766666777775
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=276.19 Aligned_cols=277 Identities=21% Similarity=0.185 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCCC-------------------ChHHHHHHHHcCCCCCCcee
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVKT-------------------SNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~~-------------------~~~a~~ia~~lGl~~~~~~~ 127 (472)
...|+++++++||+|+|+++++|| +|++|+...++.. ..++.+++..+|+ ++|++
T Consensus 116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 193 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL--EGPAM 193 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCC--CCCeE
Confidence 456999999999999999999998 4899987766431 1357789999999 57999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+|+++|+|++.||++|++.|++|++|++||+|+|.++...... .+. .
T Consensus 194 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~------~~~----------------~----------- 240 (917)
T 2hg4_A 194 TVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFT------EFR----------------S----------- 240 (917)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHH------HHT----------------T-----------
T ss_pred eecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhH------hhh----------------h-----------
Confidence 9999999999999999999999999999999999876421100 000 0
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCC
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLK 287 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~ 287 (472)
.|.+ .|... .++|+
T Consensus 241 ---------------------------------------------~~~l---s~~g~-~~pFd----------------- 254 (917)
T 2hg4_A 241 ---------------------------------------------QGGL---AADGR-CKPFS----------------- 254 (917)
T ss_dssp ---------------------------------------------SSCB---CTTSC-CCTTB-----------------
T ss_pred ---------------------------------------------ccCc---CCccc-cCccc-----------------
Confidence 0000 01000 01221
Q ss_pred CcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccc----ccccHHHHHHHHHHHcCCC
Q psy1213 288 PAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ----LLLGPAYATPQVLERAGLS 363 (472)
Q Consensus 288 p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~----~~~~~~~a~~~Al~~Agl~ 363 (472)
+..|++.++||++++||++.+.|+++|.+++++|+|++...+..... ...+...++++||++||++
T Consensus 255 ----------~~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~ 324 (917)
T 2hg4_A 255 ----------KAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVR 324 (917)
T ss_dssp ----------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCC
T ss_pred ----------ccccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 12466679999999999999999999999999999999876643211 1223468999999999999
Q ss_pred cCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc
Q psy1213 364 LSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE 442 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~ 442 (472)
++|||++|+|+++|.. +.+++++|... |. .+ ..++.| +|+++++..+||+.+|+|+..+++++++|+++
T Consensus 325 p~dId~veaHgtgT~~gD~~E~~al~~~-fg---~~---~~~~~~---~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~ 394 (917)
T 2hg4_A 325 AGDVDYVEAHGTGTRLGDPIEVHALLST-YG---AE---RDPDDP---LWIGSVKSNIGHTQAAAGVAGVMKAVLALRHG 394 (917)
T ss_dssp GGGCCEEECCCCCCTTHHHHHHHHHHTT-TT---TS---SCTTSC---CEEECTHHHHCBCGGGTTHHHHHHHHHHHHHT
T ss_pred HHHCCEEeeccCCCccCcHHHHHHHHHH-hc---cc---cCCCCc---eeccCcccceecchhhhHHHHHHHHHHHHhcC
Confidence 9999999999999963 55666666421 21 11 111224 88989999999999999999999999999874
Q ss_pred c-----------------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 443 D-----------------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 443 ~-----------------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
. .+++++++++.||.|+++||+..|.
T Consensus 395 ~ipp~~~~~~~~p~i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~ 455 (917)
T 2hg4_A 395 EMPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPE 455 (917)
T ss_dssp EECCCTTCCSBCTTSCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECCC
T ss_pred CcCCCCCCCCCCccCCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccCCc
Confidence 1 1567888999999999999998764
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=250.20 Aligned_cols=288 Identities=16% Similarity=0.105 Sum_probs=216.8
Q ss_pred eeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEee
Q psy1213 24 SLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTV 101 (472)
Q Consensus 24 ~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~ 101 (472)
.|.+++.|+|++.++|+.+.+... +.||.. ++++.+|+...++++..+|+.+|+++||+++|+++++||.|++++.
T Consensus 3 ~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~r~~~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~ 80 (322)
T 1ub7_A 3 GILALGAYVPERVMTNADFEAYLDTSDEWIVT--RTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATN 80 (322)
T ss_dssp EEEEEEEECCSEEEEHHHHHTTSSCCHHHHHH--HTCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECS
T ss_pred EEEEEEEECCCceecHHHHHHHhCCCHHHHHH--hcCceEEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 589999999999999988776532 456644 6788776544457899999999999999999999999999999988
Q ss_pred cCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhh
Q psy1213 102 IQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRA 181 (472)
Q Consensus 102 ~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~ 181 (472)
.++...++++..++..+|+ ++++++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 81 ~~~~~~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~-------------- 144 (322)
T 1ub7_A 81 TPDALFPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKII-------------- 144 (322)
T ss_dssp SCSEEESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTS--------------
T ss_pred CCCCCCCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcccc--------------
Confidence 7766567789999999999 589999999999999999999999999999999999999865210
Q ss_pred ccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCcc
Q psy1213 182 NKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILP 261 (472)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P 261 (472)
+|
T Consensus 145 ------------------------------------------------------------------------------~~ 146 (322)
T 1ub7_A 145 ------------------------------------------------------------------------------DW 146 (322)
T ss_dssp ------------------------------------------------------------------------------CT
T ss_pred ------------------------------------------------------------------------------Ch
Confidence 00
Q ss_pred ceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEE-EEeEEeccC
Q psy1213 262 IQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYL-RDFVYVSQD 340 (472)
Q Consensus 262 ~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I-~g~~~~~~~ 340 (472)
+. ..++...+|||+|+||++.+. +..++..+ .+.+...+.
T Consensus 147 ~d-----------------------------------~~~~~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~ 187 (322)
T 1ub7_A 147 ND-----------------------------------RATAVLFGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKE 187 (322)
T ss_dssp TC-----------------------------------HHHHTTBCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTT
T ss_pred hh-----------------------------------cccceeeccccEEEEEEecCC----CCceeEEEEEEecCCCCe
Confidence 00 001122799999999987643 11122222 222211110
Q ss_pred ----------Cccc------c--c--------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhh
Q psy1213 341 ----------PKDQ------L--L--------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAK 394 (472)
Q Consensus 341 ----------p~~~------~--~--------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~ 394 (472)
|... . + .....+++++|+++|++++|||+++.|.+++...-...+.||
T Consensus 188 ~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg------ 261 (322)
T 1ub7_A 188 LYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLG------ 261 (322)
T ss_dssp EEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTT------
T ss_pred EEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcC------
Confidence 2110 0 0 123578999999999999999999999999876555567777
Q ss_pred hhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 395 NYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 395 ~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+|.+++..+ +..+||+.+|++...+.+++++=+-+.+++.|..+++.|+...++||+.
T Consensus 262 -----------~~~~~~~~~--~~~~Gh~~~As~~~~l~~~l~~g~~~~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 262 -----------LPWERVAVN--VDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp -----------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred -----------CCHHHHHHH--HHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEChhheeEEEEEEe
Confidence 344444322 3458999999999999888776444567899999898889999999975
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=251.34 Aligned_cols=293 Identities=15% Similarity=0.089 Sum_probs=218.1
Q ss_pred cccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEE
Q psy1213 20 ITNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97 (472)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi 97 (472)
+.++.|.+++.|+|++.++++.+.+... +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.|+
T Consensus 10 m~~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi 87 (335)
T 1u6e_A 10 ARSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYT--RTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVI 87 (335)
T ss_dssp CSCEEEEEEEEECCSEEEEHHHHTTSSSCCHHHHHH--HHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred CCceEEEEEEEECCCceecHHHHHHHhCCCHHHHHH--hcCCceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3556799999999999999987776543 456644 788887765556789999999999999999999999999999
Q ss_pred EEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHH
Q psy1213 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSL 177 (472)
Q Consensus 98 ~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~ 177 (472)
+++..+++..+.++..++..+|++ ++++++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 88 ~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~---------- 156 (335)
T 1u6e_A 88 VTTNTHFLQTPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTI---------- 156 (335)
T ss_dssp EECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGGGC----------
T ss_pred EEcCCCCCCCChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccccc----------
Confidence 999888776788999999999996 689999999999999999999999999999999999999875210
Q ss_pred HHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC
Q psy1213 178 LLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT 257 (472)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~ 257 (472)
T Consensus 157 -------------------------------------------------------------------------------- 156 (335)
T 1u6e_A 157 -------------------------------------------------------------------------------- 156 (335)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEE-EeEE
Q psy1213 258 DILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLR-DFVY 336 (472)
Q Consensus 258 ~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~-g~~~ 336 (472)
.|+ + ..+|...+|||+|+||++.+. .+ ++..+. +.+.
T Consensus 157 --~~~-------d----------------------------~~~~~~~gDGA~A~vl~~~~~---~~--i~~~~~~~~g~ 194 (335)
T 1u6e_A 157 --DMY-------D----------------------------RGNCFIFADGAAAVVVGETPF---QG--IGPTVAGSDGE 194 (335)
T ss_dssp --CTT-------C----------------------------TTTTTTBCEEEEEEEEEECSS---CC--BCCCEEEECGG
T ss_pred --Ccc-------c----------------------------cccceEeccccEEEEEEecCC---CC--eeEEEEEEcCC
Confidence 000 0 013445899999999987542 12 122222 2211
Q ss_pred ecc-------------CCc-----ccc-c--------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCc
Q psy1213 337 VSQ-------------DPK-----DQL-L--------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDS 389 (472)
Q Consensus 337 ~~~-------------~p~-----~~~-~--------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~ 389 (472)
..+ .|. ..+ + .....+++++|+++|++++|||++++|++++.......+.||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~~~~~~~lg- 273 (335)
T 1u6e_A 195 QADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQ- 273 (335)
T ss_dssp GGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHT-
T ss_pred cccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcC-
Confidence 100 010 000 0 123568899999999999999999999999988777888998
Q ss_pred hhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 390 EWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 390 ~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+++++ ++..+ +--+||+.+|+....+.++..+-+-+.+++.|..+++.|+...++||+.
T Consensus 274 --~~~~~-------------~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 274 --LRPDA-------------VVAND--IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp --CCTTC-------------EECCT--HHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --CCchh-------------hhhhh--hhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEe
Confidence 43321 23222 2448999999987666555554333457888888777777778888875
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=268.20 Aligned_cols=270 Identities=17% Similarity=0.191 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC-------------------CCChHHHHHHHHcCCCCCCcee
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV-------------------KTSNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~-------------------~~~~~a~~ia~~lGl~~~~~~~ 127 (472)
...|+++++++||+|+|++++++| ++++|+...++ ..+.++.+++..+|+ ++|++
T Consensus 80 ~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~GPs~ 157 (965)
T 3hhd_A 80 QLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF--RGPSI 157 (965)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCC--CCCee
Confidence 345999999999999999999999 78998765542 124578899999999 57999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+|+++|+|++.||++|++.|++|++|++||+|+|.++...... .+.
T Consensus 158 tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~------~~~---------------------------- 203 (965)
T 3hhd_A 158 ALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSV------QFL---------------------------- 203 (965)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHH------HHH----------------------------
T ss_pred eecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHH------HHH----------------------------
Confidence 9999999999999999999999999999999999876411000 000
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCC
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLK 287 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~ 287 (472)
+.+.+ .|... .++|+.+
T Consensus 204 --------------------------------------------~~~~l---s~~g~-~~~Fd~~--------------- 220 (965)
T 3hhd_A 204 --------------------------------------------RLGML---SPEGT-CKAFDTA--------------- 220 (965)
T ss_dssp --------------------------------------------HHTCB---CTTCC-CCTTBTT---------------
T ss_pred --------------------------------------------hccCc---CCCCc-cccchhc---------------
Confidence 00000 01100 1222211
Q ss_pred CcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc-----cccccHHHHHHHHHHHcCC
Q psy1213 288 PAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD-----QLLLGPAYATPQVLERAGL 362 (472)
Q Consensus 288 p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~-----~~~~~~~~a~~~Al~~Agl 362 (472)
.+|.+ .+||++++||++.+.|+ +++++|+|++...+.... +...+...++++||++||+
T Consensus 221 -----adG~~-------~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl 284 (965)
T 3hhd_A 221 -----GNGYC-------RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGV 284 (965)
T ss_dssp -----CCSBC-------BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTC
T ss_pred -----cCCcc-------ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCC
Confidence 23444 79999999999998885 378999999998764321 1122357899999999999
Q ss_pred CcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc-ccCCCCCcHHHHHHHHHHHHh
Q psy1213 363 SLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS-IGHPFAATGVRLTVHAANRLV 440 (472)
Q Consensus 363 ~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a-~Ghp~gasG~~~v~e~v~qL~ 440 (472)
+++|||++|+|+++|.. +.++++++... |++.. . -| +.+ |+.++ +||+.+|+|+..+++++++|+
T Consensus 285 ~p~dIdyvEaHgTgT~~gD~~E~~Al~~~-f~~~~------~--~~---~~v-gs~Ks~iGH~~~AaG~~~lik~~l~l~ 351 (965)
T 3hhd_A 285 APESFEYIEAHGTGTKVGDPQELNGITRA-LCATR------Q--EP---LLI-GSTKSNMGHPEPASGLAALAKVLLSLE 351 (965)
T ss_dssp CGGGEEEEECCCCCCTTHHHHHHHHHHHH-HCSSC------S--SC---EEE-ECTHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred CHHHhccccccCCCCCCCCHHHHHHHHHH-hcccC------C--Cc---eee-eccccccccchhhhhHHHHHHHHHHHh
Confidence 99999999999999953 56666666421 33211 0 12 444 45555 699999999999999999998
Q ss_pred hcc--------------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 441 RED--------------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 441 ~~~--------------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
++. .++.++++++.||.|+++||+..+.
T Consensus 352 ~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~~ 411 (965)
T 3hhd_A 352 HGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPNTQ 411 (965)
T ss_dssp HTEECCCSSCCSBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEECCC
T ss_pred cCCcCCccCCCCCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEeccCCc
Confidence 751 1245678899999999999998654
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=238.52 Aligned_cols=291 Identities=15% Similarity=0.059 Sum_probs=217.4
Q ss_pred ccceeeeeecccCCCCcccccccccC--CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTG--KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.++.|.|++.|+|++.++++.+.+.. .+.||.. ++++.+|+...++++..+|+.+|+++||+++|+++++||.|++
T Consensus 10 ~~~~I~gig~~~P~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~ 87 (339)
T 1mzj_A 10 RFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIET--RTGIRSRRIAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVV 87 (339)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHTTTSSCCHHHHHH--HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred CceEEEEEEEeCCCccccHHHHHHHhCCCHHHHHH--hcCceEEEEeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 45679999999999999998887655 2456644 7788776544457899999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHH
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLL 178 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~ 178 (472)
++..+++..++++..++..+|++ .+++++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 88 gt~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~----------- 155 (339)
T 1mzj_A 88 STMTNFVHTPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTDVI----------- 155 (339)
T ss_dssp ECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGGGS-----------
T ss_pred EecCCCCCCChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEccccccc-----------
Confidence 99888776678999999999996 489999999999999999999999999999999999999864210
Q ss_pred HhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC
Q psy1213 179 LRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD 258 (472)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~ 258 (472)
T Consensus 156 -------------------------------------------------------------------------------- 155 (339)
T 1mzj_A 156 -------------------------------------------------------------------------------- 155 (339)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEE-EEEeEEe
Q psy1213 259 ILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY-LRDFVYV 337 (472)
Q Consensus 259 ~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~-I~g~~~~ 337 (472)
.|. | + .++...+|||+|+||.+.+. ..++.. +.+.+..
T Consensus 156 -~~~---------d--------------------~------~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~ 194 (339)
T 1mzj_A 156 -DLA---------D--------------------R------SLSFLFGDGAGAAVVGPSDV-----PGIGPVVRGIDGTG 194 (339)
T ss_dssp -CSS---------C--------------------T------TTTTTBCEEEEEEEEEEESS-----CCBCCCEEEECGGG
T ss_pred -Ccc---------c--------------------c------ccceEeccCceEEEEEecCC-----CCeEEEEEEEcCCC
Confidence 000 0 0 01223799999999987542 122222 2232221
Q ss_pred cc----C---Ccc---------cc---c--------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCch
Q psy1213 338 SQ----D---PKD---------QL---L--------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSE 390 (472)
Q Consensus 338 ~~----~---p~~---------~~---~--------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~ 390 (472)
.+ . |.. .. + .....+++++|+++|++++|||+|..|...+...-...+.||
T Consensus 195 ~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg-- 272 (339)
T 1mzj_A 195 LGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLG-- 272 (339)
T ss_dssp GGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHT--
T ss_pred CCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhC--
Confidence 11 0 110 00 0 123568899999999999999999999999875545567777
Q ss_pred hhhhhhcCCCccCCCCCCC-CcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 391 WFAKNYMGRSSKVGVPDLN-KFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 391 ~~~~~g~g~~~~~G~~p~~-~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+|.+ ++.. .+--+||..+|++...+.+++.+=+-+.|++.|..+++.|....+++|+.
T Consensus 273 ---------------~~~~~~~~~--~~~~~Gn~~sAs~~~~L~~~~~~g~~~~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 273 ---------------VPEHVVVSR--DAEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp ---------------CCTTSEECC--THHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred ---------------CCccceeee--hhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 4544 4431 13358999999999998888776444567888888888777778888875
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-27 Score=235.25 Aligned_cols=286 Identities=17% Similarity=0.079 Sum_probs=212.9
Q ss_pred cceeeeeecccCCCCccccccccc-----CC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccC
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKT-----GK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLID 94 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~-----~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id 94 (472)
++.|.|++.|+|++.++|+.+.+. .. +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~~~~~~~~i~~--rtgi~~r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id 88 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQGIETSDEWIVA--RTGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSID 88 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC---CCCCHHHHHH--HHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhccccCCCCHHHhHH--hcCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 577999999999999999887765 22 456755 899998776667899999999999999999999999999
Q ss_pred EEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhh
Q psy1213 95 YIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKM 174 (472)
Q Consensus 95 ~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~ 174 (472)
.|++++..+++..+..+..++..+|++.++++++++.+|+|+++||..|+++|++|.++++||+|+|.+|....
T Consensus 89 ~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------ 162 (333)
T 4dfe_A 89 LIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRILD------ 162 (333)
T ss_dssp EEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCC------
T ss_pred EEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccccccC------
Confidence 99999998877778899999999999657999999999999999999999999999999999999998753100
Q ss_pred HHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcC
Q psy1213 175 RSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKG 254 (472)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g 254 (472)
T Consensus 163 -------------------------------------------------------------------------------- 162 (333)
T 4dfe_A 163 -------------------------------------------------------------------------------- 162 (333)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEe
Q psy1213 255 YLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDF 334 (472)
Q Consensus 255 ~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~ 334 (472)
+. | + ..|...+|||+|+||.+.+. + .|.++
T Consensus 163 ------~~---------d--------------------~------~~~~lfGDGA~A~vl~~~~~-------~--~i~~~ 192 (333)
T 4dfe_A 163 ------FK---------D--------------------R------TTCVLFGDGAGAVILQASDE-------P--GVLAS 192 (333)
T ss_dssp ------TT---------C--------------------T------TTTTTBCEEEEEEEEEEESS-------C--SEEEE
T ss_pred ------cc---------c--------------------c------cceeeeccccEEEEEEEcCC-------C--CeEEE
Confidence 00 0 0 12334799999999987541 1 12221
Q ss_pred EEecc--------CCc-----------cccc----------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHH
Q psy1213 335 VYVSQ--------DPK-----------DQLL----------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLK 385 (472)
Q Consensus 335 ~~~~~--------~p~-----------~~~~----------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~e 385 (472)
...++ .|. .... .....+++++|+++|++++|||+|.+|-..........+
T Consensus 193 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i~~~~~~ 272 (333)
T 4dfe_A 193 ALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRIMQSTCR 272 (333)
T ss_dssp EEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHH
T ss_pred EEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHH
Confidence 11110 000 0000 112467899999999999999999999999876666677
Q ss_pred hcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 386 AMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 386 alg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
.|| +|.+++..+ +--+||...|+=...+.+++.+=+-+.|++.|..+++.|-.-.++||+
T Consensus 273 ~lg-----------------l~~~~~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 273 KLG-----------------LPQERMIVT--VGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp HTT-----------------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred HhC-----------------CCHHHhhhh--HHhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEE
Confidence 888 566555442 234799998887777777665422245677777655544444566664
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-27 Score=235.85 Aligned_cols=288 Identities=17% Similarity=0.102 Sum_probs=211.6
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
+.|.+++.|+|++.++++.+.+... +.||.. ++++.+|+...++.+..+|+.+|+++||+++|+++++||.|++++
T Consensus 3 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~ 80 (317)
T 1hnj_A 3 TKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVT--RTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVAT 80 (317)
T ss_dssp EEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHH--HHCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred cEEEEEEEeCCCceecHHHHHHHhCCCHHHHHH--HhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 5699999999999999987775432 445543 677776654446789999999999999999999999999999999
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHh
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~ 180 (472)
..+++..+.++..++..+|++ .+|+++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 81 ~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~------------- 146 (317)
T 1hnj_A 81 TSATHAFPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTC------------- 146 (317)
T ss_dssp SCCSCSSSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHHS-------------
T ss_pred CCCCCCCCcHHHHHHHHhCCC-CCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC-------------
Confidence 888766678999999999996 489999999999999999999999999999999999999854200
Q ss_pred hccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCc
Q psy1213 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDIL 260 (472)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~ 260 (472)
.
T Consensus 147 -------------------------------------------------------------------------------~ 147 (317)
T 1hnj_A 147 -------------------------------------------------------------------------------D 147 (317)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEE-eEEecc
Q psy1213 261 PIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRD-FVYVSQ 339 (472)
Q Consensus 261 P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g-~~~~~~ 339 (472)
|. | . .++...+|||+|+||.+.+. ..+++.+.+ .+...+
T Consensus 148 ~~---------d-------~-------------------~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~ 187 (317)
T 1hnj_A 148 PT---------D-------R-------------------GTIIIFGDGAGAAVLAASEE-----PGIISTHLHADGSYGE 187 (317)
T ss_dssp TT---------C-------H-------------------HHHTTBCCEEEEEEEEEESS-----CSEEEEEEEECGGGGG
T ss_pred ch---------h-------c-------------------ccceeeccccEEEEEEecCC-----CceeeEEEEEcCCCCC
Confidence 00 0 0 00112799999999987542 123344433 221111
Q ss_pred ---CCcc----------cccc----------cHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhh
Q psy1213 340 ---DPKD----------QLLL----------GPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396 (472)
Q Consensus 340 ---~p~~----------~~~~----------~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g 396 (472)
-|.. .... ....+++++|+++|++++|||+|+.|.+.+...-...+.||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg-------- 259 (317)
T 1hnj_A 188 LLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLG-------- 259 (317)
T ss_dssp GEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTT--------
T ss_pred eEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcC--------
Confidence 0110 0011 23578899999999999999999999999876555567777
Q ss_pred cCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 397 ~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
+|.+++.. -+--+||..+|++...+.+++.+=+-+.|++.|..+++.|..-.+++|+
T Consensus 260 ---------~~~~~~~~--~~~~~Gn~~~As~~~~L~~~~~~~~~~~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 260 ---------MSMDNVVV--TLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp ---------CCGGGBCC--CHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------CCHHHhHh--hHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhheeEEEEEE
Confidence 34444432 1234899999999999888876533345778888766655555667765
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-27 Score=235.19 Aligned_cols=290 Identities=18% Similarity=0.153 Sum_probs=213.2
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
++.|.+++.|+|++.++|+.+.+... +.||.. +|++.+|+... +++..+|+.+|+++||+++|+ ++||.|+++
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~~~~-~~~~~~la~~Aa~~al~~ag~--~~id~vi~~ 79 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAELDTSDAWISS--RTGVRQRHIAG-DLGSGDLALRAASAALASAGL--ERVDAVVLA 79 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHTTCCHHHHHH--HHCCCEEECCT-TCCHHHHHHHHHHHHHHHHTC--SCCSEEEEE
T ss_pred eeEEEEEEEECCCcEecHHHHHHHhCCCHHHHHH--hhCceEEEecC-CCCHHHHHHHHHHHHHHhCCc--ccCCEEEEE
Confidence 35699999999999999987776543 456644 67777765332 378999999999999999999 899999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHH
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLL 179 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~ 179 (472)
+..++...++++..++..+|++ .+++++++++|+|+++||..|.++|++|.+|++||+|+|.++...
T Consensus 80 t~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~~~------------ 146 (331)
T 2x3e_A 80 TSTGDFCCPATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFSHTL------------ 146 (331)
T ss_dssp CSSCSEEESCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGS------------
T ss_pred eCCCCCCCChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccccCC------------
Confidence 8887765677899999999996 589999999999999999999999999999999999999864210
Q ss_pred hhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCC
Q psy1213 180 RANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDI 259 (472)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~ 259 (472)
++. .+.
T Consensus 147 -------------------------------~~~------------------d~~------------------------- 152 (331)
T 2x3e_A 147 -------------------------------DPA------------------DRS------------------------- 152 (331)
T ss_dssp -------------------------------CTT------------------CHH-------------------------
T ss_pred -------------------------------Ccc------------------ccc-------------------------
Confidence 000 000
Q ss_pred ccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc
Q psy1213 260 LPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ 339 (472)
Q Consensus 260 ~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~ 339 (472)
.+.+ .+|||+|+||++.+.| .+. .|.+....++
T Consensus 153 ----------------------------------~~~~-------~GdGA~A~vL~~~~~a--~~~----~i~~~~~~~d 185 (331)
T 2x3e_A 153 ----------------------------------TRAL-------FGDGAGAVVLRAGDAE--EEG----ALLAFDLGSD 185 (331)
T ss_dssp ----------------------------------HHHH-------BCCEEEEEEEEEECTT--STT----BEEEEEEEEC
T ss_pred ----------------------------------ccee-------eccccEEEEEEecCCC--CCC----ceEEEEEEEc
Confidence 0112 7999999999876533 111 1222222111
Q ss_pred ----C----Cc------------cc-c--c--------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcC
Q psy1213 340 ----D----PK------------DQ-L--L--------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMD 388 (472)
Q Consensus 340 ----~----p~------------~~-~--~--------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg 388 (472)
+ |. .. . + .....+++++|+++|++++|||+|..|...+...-...+.||
T Consensus 186 g~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~~d~~~~~lg 265 (331)
T 2x3e_A 186 GHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLD 265 (331)
T ss_dssp GGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHT
T ss_pred CCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcC
Confidence 0 00 00 0 0 123568899999999999999999999999976556667787
Q ss_pred chhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeCCC
Q psy1213 389 SEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 389 ~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
+|.+++..+ +--+||..+|+....+.+++.+-+-+.|++.|..+++.|....+++|+- |+
T Consensus 266 -----------------~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~~l~~-~~ 325 (331)
T 2x3e_A 266 -----------------LPVERVVSN--IAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRW-PK 325 (331)
T ss_dssp -----------------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEEC-CC
T ss_pred -----------------CCHHHHhhh--HhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEeHHhhheeeEEEE-CC
Confidence 344433322 2358999999999999888776555667888888777666677777754 44
Q ss_pred CC
Q psy1213 469 AT 470 (472)
Q Consensus 469 ~~ 470 (472)
.+
T Consensus 326 ~~ 327 (331)
T 2x3e_A 326 IV 327 (331)
T ss_dssp CC
T ss_pred cc
Confidence 44
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=229.26 Aligned_cols=286 Identities=15% Similarity=0.077 Sum_probs=214.3
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
-|.+|.|++.|+|++.++|+.+.+... +.||.. +|++.+|+...+++++.+|+.+|+++||+++|+++++||.|++
T Consensus 8 ~~~~~~~~g~ylP~~~v~n~~l~~~~~~~~~~i~~--~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~ 85 (323)
T 3il3_A 8 MNSRILSTGSYLPSHIRTNADLEKMVDTSDEWIVT--RSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIV 85 (323)
T ss_dssp CEECCCEEEEECCSCEEEHHHHHTTSSCCHHHHHH--HTCCCEEECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEE
T ss_pred ccCceeEEEEECCCceEcHHHHHHHhCCCHHHHHH--hcCCcEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 566799999999999999998887653 557765 8999987766668999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHH
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLL 178 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~ 178 (472)
++.++++..++.+..++..+|++ ++++++++.+|+|+++||..|.++|++|.++++||+|+|.+|....
T Consensus 86 ~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~---------- 154 (323)
T 3il3_A 86 ATTSHSHAYPSAACQVQGLLNID-DAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRKLD---------- 154 (323)
T ss_dssp ECSCCSCSSSCHHHHHHHHTTCS-SCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGSCC----------
T ss_pred EeCCCCCCCccHHHHHHHHhCCC-CccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccccC----------
Confidence 99888776788999999999996 7999999999999999999999999999999999999999764210
Q ss_pred HhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC
Q psy1213 179 LRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD 258 (472)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~ 258 (472)
T Consensus 155 -------------------------------------------------------------------------------- 154 (323)
T 3il3_A 155 -------------------------------------------------------------------------------- 154 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEec
Q psy1213 259 ILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS 338 (472)
Q Consensus 259 ~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~ 338 (472)
+ .| + ..|...+|||+|+||...+ . + .|.++...+
T Consensus 155 --~---------~d--------------------~------~~~~lfGDGA~A~vl~~~~---~----~--~i~~~~~~s 188 (323)
T 3il3_A 155 --E---------TD--------------------R------STVVLFGDGAGAVILEASE---Q----E--GIISTHLHA 188 (323)
T ss_dssp --T---------TC--------------------T------TTTTTBCEEEEEEEEEEES---S----C--CEEEEEEEE
T ss_pred --c---------cc--------------------c------ccccccccceEEEEEEEcC---C----C--CeEEEEEEE
Confidence 0 00 0 0123379999999998753 1 1 122211111
Q ss_pred c--------CCc--------ccc-ccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchh
Q psy1213 339 Q--------DPK--------DQL-LLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEW 391 (472)
Q Consensus 339 ~--------~p~--------~~~-~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~ 391 (472)
+ -|. ... ..+ ...+++++|+++|++++|||+|=+|-..........+.||
T Consensus 189 ~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~lg--- 265 (323)
T 3il3_A 189 SADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQANLRIITATAKKLE--- 265 (323)
T ss_dssp CCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCSCHHHHHHHHHHTT---
T ss_pred cCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcC---
Confidence 0 010 000 011 1356789999999999999999999999876666778888
Q ss_pred hhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 392 FAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 392 ~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
+|.+++-.+ +--+||...|+=...+.+++.+=+-+.|++.|..+++.|-.-.++||+
T Consensus 266 --------------l~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 266 --------------MDMSQVVVT--LDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp --------------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTSSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------cCHHHhhcc--HhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEE
Confidence 566555432 334799988887777777765433345677777655544445566664
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=233.49 Aligned_cols=307 Identities=14% Similarity=0.075 Sum_probs=219.4
Q ss_pred cccceeeeeecccCCCCccccccccc---------CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCc
Q psy1213 20 ITNMSLKSICTSHNVYSPRKSVKDKT---------GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISK 90 (472)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~~~~~~~~---------~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~ 90 (472)
++++.|.++++|+|++.++|+++.+. ..+.||.. +|++.+|+...+++++.+|+.+|+++||+++|+++
T Consensus 10 ~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~~~i~~--~tGi~~R~~~~~~~~~~~La~~Aa~~al~~ag~~~ 87 (345)
T 3s21_A 10 FQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKTDVLGD--VAGIHARRLWDQDVQASDAATQAARKALIDANIGI 87 (345)
T ss_dssp CSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCCCHHHH--TTCCSEEEECSSCCCHHHHHHHHHHHHHHHHTCCG
T ss_pred ecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCHHHHHH--hhCceeEEECCCCCCHHHHHHHHHHHHHHHcCCCH
Confidence 47788999999999999999887653 23567765 89999877655688999999999999999999999
Q ss_pred CccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccc
Q psy1213 91 DLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRH 170 (472)
Q Consensus 91 ~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~ 170 (472)
++||.|++++.++++..+..+..++..+|++.++++++++.+|+|+++||..|.++|++|.++++||+|+|.+|.....
T Consensus 88 ~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~- 166 (345)
T 3s21_A 88 EKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEK- 166 (345)
T ss_dssp GGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHHH-
T ss_pred HHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhcc-
Confidence 9999999999888877788999999999997568999999999999999999999999999999999999998642000
Q ss_pred hhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHH
Q psy1213 171 SRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQA 250 (472)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a 250 (472)
. .. .+ +. + ..+.
T Consensus 167 --~----~~----------------~~----~~---~----------------------~~~~----------------- 178 (345)
T 3s21_A 167 --T----LE----------------RM----TS---P----------------------DVTE----------------- 178 (345)
T ss_dssp --H----HH----------------HH----TC---T----------------------TCCH-----------------
T ss_pred --c----cc----------------cc----cC---C----------------------ccch-----------------
Confidence 0 00 00 00 0 0000
Q ss_pred HHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEE
Q psy1213 251 QEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY 330 (472)
Q Consensus 251 ~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~ 330 (472)
++|+. ...+...+|||+|+||.+.+... + ...
T Consensus 179 ----------------~~f~~---------------------------~~~~~~~GdGA~A~vl~~~~~~~--~---~~~ 210 (345)
T 3s21_A 179 ----------------EEFRN---------------------------ELAALTLGCGAAAMVMARSELVP--D---APR 210 (345)
T ss_dssp ----------------HHHHH---------------------------HHGGGGBCCEEEEEEEEEGGGST--T---SCE
T ss_pred ----------------hhhhh---------------------------hccceeeccceeEEEEecCCCCC--C---Ccc
Confidence 00100 01122379999999999754311 1 124
Q ss_pred EEEeEEeccCC-cc--------ccccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchh
Q psy1213 331 LRDFVYVSQDP-KD--------QLLLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEW 391 (472)
Q Consensus 331 I~g~~~~~~~p-~~--------~~~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~ 391 (472)
|.+.....+.. .. ....+ ...+++++|+++|++++|||+|-+|-..........+.||
T Consensus 211 i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~lg--- 287 (345)
T 3s21_A 211 YKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPHTAAFVKSFG--- 287 (345)
T ss_dssp EEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHHHHHHHHHHT---
T ss_pred eeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcC---
Confidence 55544432200 00 00011 1356789999999999999999999999876666677888
Q ss_pred hhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 392 FAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 392 ~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
+|.+++..+ +--+||...|+-...+.+++.+=+-+.|++.|..+++.|-.-.+++|+
T Consensus 288 --------------l~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 288 --------------IDPAKVMTI--FGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp --------------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------cCHHHceee--HhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhhhheEEEEE
Confidence 555554321 234799999998888888877633345677777665544445566664
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9e-26 Score=273.26 Aligned_cols=288 Identities=14% Similarity=0.104 Sum_probs=202.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC--------EEEEEeecCCC------------------------CCChHHHHHHH-
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID--------YIVYGTVIQEV------------------------KTSNIGREAAL- 116 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id--------~vi~g~~~~~~------------------------~~~~~a~~ia~- 116 (472)
...+|+++++++||+|+|+++++|+ ++++|+..+.. .....+..++.
T Consensus 2646 p~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~ 2725 (3089)
T 3zen_D 2646 RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQS 2725 (3089)
T ss_dssp HHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHH
Confidence 3567999999999999999999884 68888754321 01224455554
Q ss_pred HcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhc
Q psy1213 117 SAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLAT 196 (472)
Q Consensus 117 ~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (472)
++|+ .+|+++|+++|+|+++||++|++.|++|++|++||+|+|.++..++.. +.
T Consensus 2726 ~lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~-------f~----------------- 2779 (3089)
T 3zen_D 2726 YVGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIG-------FG----------------- 2779 (3089)
T ss_dssp TTCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-------HH-----------------
T ss_pred HcCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHH-------HH-----------------
Confidence 5699 589999999999999999999999999999999999999975422110 00
Q ss_pred cCCCCCCCCcccccccccCCchhH-HHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCC
Q psy1213 197 IRPDFFIPELPAVAEFSSGETMGH-SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGV 275 (472)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~-~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~ 275 (472)
.++. ....++..++.+ |... .++|+.+
T Consensus 2780 --------------------~~~als~~~~~~~~~~s----------------------------p~~~-crpFd~~--- 2807 (3089)
T 3zen_D 2780 --------------------DMAATADTEMMRAKGIS----------------------------DSKF-SRANDRR--- 2807 (3089)
T ss_dssp --------------------HHTCBCCHHHHHHTTCC----------------------------TTTS-CCSSBTT---
T ss_pred --------------------HhhhhhcchhhhhccCC----------------------------cccc-cCccccC---
Confidence 0000 001122222211 1111 1233221
Q ss_pred ccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--cc--------
Q psy1213 276 RVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--QL-------- 345 (472)
Q Consensus 276 ~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~~-------- 345 (472)
.+|.+ ++|||+++||++.+.|+++|+++++.|.+.+...+.... ..
T Consensus 2808 -----------------~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a 2863 (3089)
T 3zen_D 2808 -----------------RLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGA 2863 (3089)
T ss_dssp -----------------CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGG
T ss_pred -----------------CCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhH
Confidence 23555 899999999999999999999999988887775442110 00
Q ss_pred -cccHHHHHHHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCC
Q psy1213 346 -LLGPAYATPQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHP 423 (472)
Q Consensus 346 -~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp 423 (472)
..+...++++||++||++++|||+||.|+++|. .+.++++++.. +.. -.| +-+..++|+++++..+|||
T Consensus 2864 ~~~~q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~a--l~~-~fg------~~~~~~~~v~s~Ks~iGH~ 2934 (3089)
T 3zen_D 2864 ARGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHER--IAD-SMG------RAPGNPLFIVSQKTLTGHA 2934 (3089)
T ss_dssp STTGGGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHH--HHH-HTT------CCTTCCEEEECSHHHHCBC
T ss_pred hhhhHHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHH--HHH-HhC------ccCCCcceecccccccCCc
Confidence 112346899999999999999999999999995 35555553210 100 001 0111348899999999999
Q ss_pred CCCcHHHHHHHHHHHHhhcc----------------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 424 FAATGVRLTVHAANRLVRED----------------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 424 ~gasG~~~v~e~v~qL~~~~----------------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
.||+|+.+++.++++|+++- .+++++++++.||.|+++||+..+.
T Consensus 2935 ~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~ 3013 (3089)
T 3zen_D 2935 KGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEA 3013 (3089)
T ss_dssp STTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGG
T ss_pred hhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCch
Confidence 99999999999999998641 1467788999999999999998653
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=224.55 Aligned_cols=141 Identities=18% Similarity=0.151 Sum_probs=129.7
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.+.+|.|+|.|+|++.++|+++.+... +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.||+
T Consensus 12 ~~srI~g~g~ylP~~~v~n~el~~~~~~~~e~I~~--rtGI~~R~~a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~ 89 (350)
T 4ewp_A 12 AASRIVAVGAYRPANLVPNEDLIGPIDSSDEWIRQ--RTGIVTRQRATAEETVPVMAVGAAREALERAGLQGSDLDAVIV 89 (350)
T ss_dssp SEEEEEEEEEECCSCEEEHHHHTTTTTCCHHHHHH--HHCCSEEECCCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred CCCEEEEEEEEcCCCeEcHHHHHHHhCCCHHHHHh--ccCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 456799999999999999999887764 678876 8999987766678999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
++.++++..|..+..++..||++ +.++++++.+|+++++||..|..+|++|.++.+||+++|.+|
T Consensus 90 ~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s 154 (350)
T 4ewp_A 90 STVTFPHATPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLS 154 (350)
T ss_dssp ECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG
T ss_pred EeccCCCCCCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeece
Confidence 99999887899999999999997 678999999999999999999999999999999999999875
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=226.88 Aligned_cols=294 Identities=17% Similarity=0.095 Sum_probs=216.2
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.++.|.+++.|+|++.++|+.+.+... +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.|++
T Consensus 24 ~~~~I~~~g~~~P~~~v~~~~l~~~~~~~~~~i~~--~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~ 101 (359)
T 3h78_A 24 GNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVE--RTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLV 101 (359)
T ss_dssp CCCEEEEEEEECCSEEEEHHHHTTTSSCCHHHHHH--HHCCCEEEECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEE
T ss_pred CCcEEEEEEEECCCceEcHHHHHHHhCCCHHHHHH--hcCceEEEEcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEE
Confidence 678899999999999999988876643 557755 8899887666668999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHH
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLL 178 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~ 178 (472)
++.+++...+.++..++..+|++ ++++++++.+|+|+++||..|..+|++|.++++||+|+|.+|.....
T Consensus 102 ~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~~~--------- 171 (359)
T 3h78_A 102 NTLSPDHHDPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDC--------- 171 (359)
T ss_dssp ECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGCCC---------
T ss_pred EeCCCCCCCCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccCCc---------
Confidence 99888776788899999999997 78999999999999999999999999999999999999997642100
Q ss_pred HhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC
Q psy1213 179 LRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD 258 (472)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~ 258 (472)
.
T Consensus 172 ---------------------~---------------------------------------------------------- 172 (359)
T 3h78_A 172 ---------------------S---------------------------------------------------------- 172 (359)
T ss_dssp ---------------------S----------------------------------------------------------
T ss_pred ---------------------c----------------------------------------------------------
Confidence 0
Q ss_pred CccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEec
Q psy1213 259 ILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS 338 (472)
Q Consensus 259 ~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~ 338 (472)
|. .. ..|...+|||+|+||...+. ..+ .|.++...+
T Consensus 173 -------------d~-----~~-------------------~t~~lfGDGAaA~vl~~~~~-----~~~--~i~~~~~~s 208 (359)
T 3h78_A 173 -------------DR-----GR-------------------NLSILLGDGAGAVVVSAGES-----LED--GLLDLRLGA 208 (359)
T ss_dssp -------------TT-----TH-------------------HHHTTBCEEEEEEEEECCSC-----SSS--EEEEEEEEE
T ss_pred -------------cc-----cc-------------------cccceecceeEEEEEEecCC-----CCC--ceEEEEEEE
Confidence 00 00 01223799999999986431 011 222221111
Q ss_pred c----------------CC--------c-c-cc-ccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHH
Q psy1213 339 Q----------------DP--------K-D-QL-LLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQIL 381 (472)
Q Consensus 339 ~----------------~p--------~-~-~~-~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~ 381 (472)
+ .| . . .. ..+ ...+++++|+++|++++|||+|=.|-.......
T Consensus 209 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~ 288 (359)
T 3h78_A 209 DGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRILD 288 (359)
T ss_dssp CGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHH
T ss_pred ccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHH
Confidence 0 00 0 0 00 011 135678999999999999999999999987766
Q ss_pred HHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEE
Q psy1213 382 ANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGM 461 (472)
Q Consensus 382 ~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~ 461 (472)
...+.|| +|.+++..+ +--+||...|+=...+.+++.+ -+.|++.|..+++.|-.-.++
T Consensus 289 ~~~~~lg-----------------l~~ek~~~~--l~~~GNt~sAsi~l~L~~~~~~--l~~Gd~vll~~fG~G~t~~~~ 347 (359)
T 3h78_A 289 AVQEQLG-----------------IPQHKFAVT--VDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGATWGAA 347 (359)
T ss_dssp HHHHHHT-----------------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHGGG--SCTTCEEEEEEEETTTEEEEE
T ss_pred HHHHHhC-----------------cCHHHhhhh--hhcccchHHHHHHHHHHHHHHh--CCCCCEEEEEEEchhhhheee
Confidence 6778888 566555443 3347999999988888888777 345677777665544445667
Q ss_pred EEEeCCCCC
Q psy1213 462 IIERHPDAT 470 (472)
Q Consensus 462 ~l~~~~~~~ 470 (472)
+|+-.+..|
T Consensus 348 ll~~~~~~~ 356 (359)
T 3h78_A 348 LYRKPEEVN 356 (359)
T ss_dssp EEECC----
T ss_pred eEEehhhhc
Confidence 776544443
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=226.30 Aligned_cols=145 Identities=14% Similarity=0.133 Sum_probs=129.2
Q ss_pred ccccceeeeeecccCCCCcccccccccC---CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCE
Q psy1213 19 TITNMSLKSICTSHNVYSPRKSVKDKTG---KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDY 95 (472)
Q Consensus 19 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~ 95 (472)
++.++.|.++++|+|++.++|+.+.+.. .+.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.
T Consensus 27 ~~~~v~I~gig~~lP~~~v~n~~l~~~~~~~~~~~i~~--~tGI~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~ 104 (365)
T 3gwa_A 27 HPPRAAIADIAGHLPEQVLTNDVLAQLYPDWPAEKILA--KTGIRERRIAAPRETAADLAYEAARKLFAQGAVGADQVDF 104 (365)
T ss_dssp --CEEEEEEEEEECCSEEEEHHHHHHHCTTCCHHHHHH--HHCCCEEEECCTTCCHHHHHHHHHHHHHHTTSCCGGGCCE
T ss_pred eeccEEEEEEEEeCCCcEEcHHHHHHHccCCCHHHHHH--hcCccEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 3578899999999999999998888754 2556655 7899887665568999999999999999999999999999
Q ss_pred EEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 96 IVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 96 vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
|++++..++...+..+..++..+|++.++++++++.+|+|+++||..|.++|++|.++++||+|+|.+|.
T Consensus 105 vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~ 174 (365)
T 3gwa_A 105 VILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSK 174 (365)
T ss_dssp EEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred EEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhc
Confidence 9999988877778899999999999757999999999999999999999999999999999999999764
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-25 Score=222.21 Aligned_cols=294 Identities=14% Similarity=0.063 Sum_probs=218.3
Q ss_pred cccceeeeeecccCCCCcccccccccCC--c-eEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEE
Q psy1213 20 ITNMSLKSICTSHNVYSPRKSVKDKTGK--N-IVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYI 96 (472)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~-~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~v 96 (472)
++++.|.++++|+|++.++|+.+.+... + .||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.|
T Consensus 14 ~~~v~I~~ig~~lP~~~v~n~~l~~~~~~~~~~~i~~--~tGI~~R~~a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~v 91 (354)
T 4efi_A 14 TQGARIAGVVSCVPSKQVDNDYFVERFDASAVRDVVK--MIGVNRRRWADAQTSAGDLCRKAGEKLLAGLGWQADSIDAL 91 (354)
T ss_dssp EESEEEEEEEEEECSCEEEGGGGTTTSCHHHHHHHHH--HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred EcceEEEEEEEECCCcEEcHHHHHHHhCCCcHHHHHH--hcCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 4678899999999999999999888653 2 46655 78898876655689999999999999999999999999999
Q ss_pred EEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHH
Q psy1213 97 VYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRS 176 (472)
Q Consensus 97 i~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~ 176 (472)
++++.+++...+.++..++..+|++.++++++++.+|+|+++||..|.++|++|.++++||+|+|.+|....
T Consensus 92 i~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~-------- 163 (354)
T 4efi_A 92 IFVSQTPNYRLPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMID-------- 163 (354)
T ss_dssp EEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGCC--------
T ss_pred EEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccCC--------
Confidence 999988877788999999999999657999999999999999999999999999999999999999764110
Q ss_pred HHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCC
Q psy1213 177 LLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYL 256 (472)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~ 256 (472)
T Consensus 164 -------------------------------------------------------------------------------- 163 (354)
T 4efi_A 164 -------------------------------------------------------------------------------- 163 (354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcE-EEEEeE
Q psy1213 257 TDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKA-YLRDFV 335 (472)
Q Consensus 257 ~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a-~I~g~~ 335 (472)
|. ++ ..|...+|||+|+||...+.. .... .+...+
T Consensus 164 ----~~--------------------------------d~---~~~~lfGDGA~A~vl~~~~~~-----~~~~~~~~s~g 199 (354)
T 4efi_A 164 ----PT--------------------------------DR---STSLLFGDAGTMTALETSNGD-----AAAHFIIGADG 199 (354)
T ss_dssp ----TT--------------------------------CH---HHHTTBCCEEEEEEEEECCSC-----CEEEEEEEECG
T ss_pred ----cc--------------------------------cc---ccccccccceeEEEEeecCCC-----CceEEEEEEcC
Confidence 00 00 001237999999999864311 1111 111111
Q ss_pred Eecc---------CCcc-------------cc-ccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHH
Q psy1213 336 YVSQ---------DPKD-------------QL-LLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILA 382 (472)
Q Consensus 336 ~~~~---------~p~~-------------~~-~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~ 382 (472)
...+ .|.. .. ..+ ...+++++|+++|++++|||+|=.|-........
T Consensus 200 ~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~ 279 (354)
T 4efi_A 200 KGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDKDSYDAFLFHQANLFMLKH 279 (354)
T ss_dssp GGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHH
T ss_pred CCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHH
Confidence 0000 0100 00 001 1356789999999999999999999998876666
Q ss_pred HHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEE
Q psy1213 383 NLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMI 462 (472)
Q Consensus 383 ~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~ 462 (472)
..+.|| +|.+++..+ +--+||...|+=...+.+++.+=+-+.|++.|..+++.|-.-.+++
T Consensus 280 ~~~~Lg-----------------l~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~l 340 (354)
T 4efi_A 280 LAKKAG-----------------LPAERVPVN--IGEYGNTSCASIPLLITTELKDRLKEETLQLGMFGFGVGYSWASAA 340 (354)
T ss_dssp HHHHTT-----------------CCGGGSCCC--HHHHCBCGGGHHHHHHHHHSHHHHHHSCEEEEEEEEETTTEEEEEE
T ss_pred HHHHhC-----------------cCHHHHHHH--HhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheeeE
Confidence 778888 565555432 3447999999988888887766444566777776665555556777
Q ss_pred EEeC
Q psy1213 463 IERH 466 (472)
Q Consensus 463 l~~~ 466 (472)
|+-.
T Consensus 341 l~~~ 344 (354)
T 4efi_A 341 LAVG 344 (354)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7754
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-26 Score=236.31 Aligned_cols=294 Identities=14% Similarity=0.046 Sum_probs=211.9
Q ss_pred ceeeeeecccCCCCcccccccccCCc-----------eEEEecccccccccCccCC-----------------CCCHHHH
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGKN-----------IVFVDGVRTPFLLSGTDYA-----------------NMMAHEL 74 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~~-----------~~Ivg~~~t~~~~~~~~~~-----------------~~~~~~L 74 (472)
..|.|++.|+|++.++|+.+.+.... .||.. +|++.+|+...+ +++..+|
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~~~~~~~i~~--~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~l 87 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIE--NTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSR 87 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTTHHHHHHHHH--HTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhccChhhHHHHHHHHH--hcCCCcceeecChhhhccCCChhHHHHHHHHHHHHH
Confidence 57999999999999888776644321 23433 677776653333 4567899
Q ss_pred HHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-cccCccHHHHHHHHHHHHHcCCCC
Q psy1213 75 ARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-TMACISSNQGITTGIGLIAAGAYD 153 (472)
Q Consensus 75 a~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~Casg~~al~~A~~~I~sG~~d 153 (472)
+.+|+++||+++|+++++||.|++++..+ +..+..+..++..+|++..++++++ +++|+|+++||..|.++|++|.++
T Consensus 88 a~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~ 166 (382)
T 1u0m_A 88 VPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEA 166 (382)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999998877 4467889999999999634699999 999999999999999999999999
Q ss_pred EEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCH
Q psy1213 154 VVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSR 233 (472)
Q Consensus 154 ~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~ 233 (472)
++||+|+|.++.... .+ +.++
T Consensus 167 ~vLv~g~e~~s~~~~--------------------------------~~---------------------------d~~~ 187 (382)
T 1u0m_A 167 NALIVACEFCSLCYQ--------------------------------PT---------------------------DLGV 187 (382)
T ss_dssp EEEEEEEEEGGGGCC--------------------------------TT---------------------------CCSH
T ss_pred EEEEEEEeccchhcC--------------------------------cc---------------------------cCCH
Confidence 999999998753100 00 0000
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeee
Q psy1213 234 KEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACV 313 (472)
Q Consensus 234 e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvv 313 (472)
+. ..++...+|||+|+|
T Consensus 188 ~~---------------------------------------------------------------~~~~~lfGDGA~A~v 204 (382)
T 1u0m_A 188 GS---------------------------------------------------------------LLCNGLFGDGIAAAV 204 (382)
T ss_dssp HH---------------------------------------------------------------HHHHHHBCEEEEEEE
T ss_pred HH---------------------------------------------------------------hhccchhcCCcEEEE
Confidence 00 000112799999999
Q ss_pred ecCHHHHHHcCCCCcEEEEEeEEec--cCCc------------------cc--ccccHHHHHHHHHHHcCCCcCCcCEEE
Q psy1213 314 IMTEAKAKQLGLKPKAYLRDFVYVS--QDPK------------------DQ--LLLGPAYATPQVLERAGLSLSDIDAWE 371 (472)
Q Consensus 314 L~s~e~A~~~g~~~~a~I~g~~~~~--~~p~------------------~~--~~~~~~~a~~~Al~~Agl~~~dId~~e 371 (472)
|++.+. . ..+|.++.... +... .+ ...... +++++|+++|++++|||+|.
T Consensus 205 L~~~~~---~----g~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~ 276 (382)
T 1u0m_A 205 VRGRGG---T----GVRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYI 276 (382)
T ss_dssp EETTTC---S----EEEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCE
T ss_pred EeccCC---C----CcEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEE
Confidence 987542 1 13566654421 1000 00 011224 88999999999999999999
Q ss_pred ccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCC-CCccccCCCCCcHHHHHHHHHHHHhhccCCcchhh
Q psy1213 372 VHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWG-GSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIA 450 (472)
Q Consensus 372 ~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~G-G~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~ 450 (472)
.|..++...-...+.|| +|.++++++. -+--+||+..|+....+.+++.+-+-+.|++.|..
T Consensus 277 ~H~~~~~i~d~~~~~lg-----------------l~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~~~~Gd~vll~ 339 (382)
T 1u0m_A 277 VHAGGPRILDDLSTFLE-----------------VDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLA 339 (382)
T ss_dssp EECSHHHHHHHHHHHSC-----------------SCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSSCCCEEE
T ss_pred ECCCCHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 99999976666677887 5665654321 12348999999999999888876554567788877
Q ss_pred hhccCcceeEEEEEeC
Q psy1213 451 ACAAGGQGVGMIIERH 466 (472)
Q Consensus 451 ~~~~GG~~~a~~l~~~ 466 (472)
+++.|....+++|+..
T Consensus 340 ~~G~G~t~~~~vl~~~ 355 (382)
T 1u0m_A 340 GFGPGITAEMSLGCWQ 355 (382)
T ss_dssp EEETTTEEEEEEEEEE
T ss_pred EEcccceeEEEEEEEe
Confidence 6665555667788753
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-26 Score=233.79 Aligned_cols=302 Identities=16% Similarity=0.118 Sum_probs=214.9
Q ss_pred ccceeeeeecccCCCCcccccccccCC-----------ceEEEecccccccccCc-cCC---------------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK-----------NIVFVDGVRTPFLLSGT-DYA--------------------- 67 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~-----------~~~Ivg~~~t~~~~~~~-~~~--------------------- 67 (472)
.+..|.++++|+|++.++|+.+.+... ..||.. +|++.+|+. ..+
T Consensus 31 ~~~~I~~ig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~a~~~~~~~~~~~~~p~~~~~r~~~ 108 (393)
T 1ted_A 31 TVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQ--KSRITTRRMAVDPLDAKFDVFRREPATIRDRMHL 108 (393)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHH--TSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHH
T ss_pred cccEEEEeeeeCCCcccCHHHHHHHHHHhcccccHHHHHHHHHH--hCCcCcceeeecChHhcccccccCCCCHHHHHHH
Confidence 447799999999999999977764332 135544 788887654 332
Q ss_pred -CCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-cccCccHHHHHHHHHH
Q psy1213 68 -NMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-TMACISSNQGITTGIG 145 (472)
Q Consensus 68 -~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~Casg~~al~~A~~ 145 (472)
+++..+|+.+|+++||+++|+++++||.+++++..+ ...+.++..++..+|++..++++++ +++|+|+++||..|.+
T Consensus 109 ~~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~ 187 (393)
T 1ted_A 109 FYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATN 187 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHH
Confidence 357889999999999999999999999999998877 4467889999999999744678998 9999999999999999
Q ss_pred HHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHH
Q psy1213 146 LIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225 (472)
Q Consensus 146 ~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 225 (472)
+|++|.+|++||+|+|.++....
T Consensus 188 ~i~~G~~~~vLv~g~e~~s~~~~--------------------------------------------------------- 210 (393)
T 1ted_A 188 YVRAHPAMKALVVCIELCSVNAV--------------------------------------------------------- 210 (393)
T ss_dssp HHHHSTTCEEEEEEEEECGGGCC---------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEEEeccccCC---------------------------------------------------------
Confidence 99999999999999998763100
Q ss_pred HHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCc
Q psy1213 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFL 305 (472)
Q Consensus 226 ~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~ 305 (472)
|+..++. ...+...
T Consensus 211 ---~~~~r~~---------------------------------------------------------------~~~~~lf 224 (393)
T 1ted_A 211 ---FADDIND---------------------------------------------------------------VVIHSLF 224 (393)
T ss_dssp ---CCSSHHH---------------------------------------------------------------HHHHHHB
T ss_pred ---CCCCHHH---------------------------------------------------------------hhhhhhh
Confidence 0000000 0001127
Q ss_pred CcceeeeeecCHHHHHHcCCCCcEEEEEeEEe--ccCCcc----------c--cc--------ccHHHHHHHHHHHcCCC
Q psy1213 306 TDGASACVIMTEAKAKQLGLKPKAYLRDFVYV--SQDPKD----------Q--LL--------LGPAYATPQVLERAGLS 363 (472)
Q Consensus 306 ~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~--~~~p~~----------~--~~--------~~~~~a~~~Al~~Agl~ 363 (472)
+|||+|+||++.+.+...+ ..+++|.+++.. .+.... . .+ .....+++++|+++|++
T Consensus 225 GDGA~A~vL~~~~~~~~~~-~~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~ 303 (393)
T 1ted_A 225 GDGCAALVIGASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQ 303 (393)
T ss_dssp CEEEEEEEEEEECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCccEEEEEecCCCccccC-cceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999998765331112 234578887554 221000 0 01 11246789999999999
Q ss_pred cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHHHHHHHhh-
Q psy1213 364 LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVHAANRLVR- 441 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e~v~qL~~- 441 (472)
++|||+|.+|..++...-...+.|| +|.+++..+ --+--+||...|+-...+.+++.+-+-
T Consensus 304 ~~dId~~~~H~~~~~i~d~~~~~lg-----------------l~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~ 366 (393)
T 1ted_A 304 ISDIDLWAIHPGGPKIIEQSVRSLG-----------------ISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESA 366 (393)
T ss_dssp GGGCSCEEECCSCHHHHHHHHHHHT-----------------CCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSS
T ss_pred HhHCCEEEECCCcHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccC
Confidence 9999999999999976666667787 565555321 012347898888888777777665433
Q ss_pred ccCCcchhhhhccCcceeEEEEEeC
Q psy1213 442 EDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 442 ~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+.|++.|..+++.|....+++|+..
T Consensus 367 ~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 367 KAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp SSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCeEEEEEeccchhhhhhheeec
Confidence 2567777766665555567777754
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.1e-26 Score=231.03 Aligned_cols=295 Identities=15% Similarity=0.079 Sum_probs=209.5
Q ss_pred cceeeeeecccCCCCcccccccccCC------------ceEEEecccccccccCccCCC---------------------
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK------------NIVFVDGVRTPFLLSGTDYAN--------------------- 68 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~------------~~~Ivg~~~t~~~~~~~~~~~--------------------- 68 (472)
++.|.|++.|+|++.++++.+.+... +.+|.. +|++.+|+...++
T Consensus 13 ~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (374)
T 2h84_A 13 NSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFE--QSQIKTRHLVRDYTKPENSIKFRHLETITDVNNQ 90 (374)
T ss_dssp CCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHH--TTCCCEECCSSCTTSGGGCGGGGGGCCHHHHHHH
T ss_pred CeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHH--hCCcCcceeecCccccccccccCChHHHHHHHHH
Confidence 56799999999999999977765321 123443 7888876544445
Q ss_pred --CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec-ccCccHHHHHHHHHH
Q psy1213 69 --MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT-MACISSNQGITTGIG 145 (472)
Q Consensus 69 --~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~Casg~~al~~A~~ 145 (472)
++..+|+.+|+++||+++|+++++||.+++++..+. ..+.++..++..+|++..+++++++ ++|+|+++||..|++
T Consensus 91 ~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~-~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~ 169 (374)
T 2h84_A 91 FKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGI-IIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAAS 169 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-CSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCC-CCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHH
Confidence 668899999999999999999999999999987763 4678899999999996346999997 899999999999999
Q ss_pred HHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHH
Q psy1213 146 LIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225 (472)
Q Consensus 146 ~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 225 (472)
+|++|.++++||+|+|.++..... |
T Consensus 170 ~i~~g~~~~vLv~g~e~~s~~~~~-------------------------------------~------------------ 194 (374)
T 2h84_A 170 LAKASPRNRILVVCTEVCSLHFSN-------------------------------------T------------------ 194 (374)
T ss_dssp HHTTCTTCEEEEEEEECCGGGCCC-------------------------------------S------------------
T ss_pred HHHcCCCCEEEEEEEEecchhhcC-------------------------------------C------------------
Confidence 999999999999999987531100 0
Q ss_pred HHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCc
Q psy1213 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFL 305 (472)
Q Consensus 226 ~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~ 305 (472)
..++ . ..++...
T Consensus 195 -----~dr~-----------------------------------------------~----------------~~~~~lf 206 (374)
T 2h84_A 195 -----DGGD-----------------------------------------------Q----------------MVASSIF 206 (374)
T ss_dssp -----SSHH-----------------------------------------------H----------------HHHHHHB
T ss_pred -----CCHH-----------------------------------------------H----------------Hhhhhhh
Confidence 0000 0 0011127
Q ss_pred CcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc--C---------Ccc-cc----------cccHHHHHHHHHHHcC--
Q psy1213 306 TDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ--D---------PKD-QL----------LLGPAYATPQVLERAG-- 361 (472)
Q Consensus 306 ~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~--~---------p~~-~~----------~~~~~~a~~~Al~~Ag-- 361 (472)
+|||+|+||.+.+.+++.+ . .+|.+.+.... . ... .+ ......+++++|+++|
T Consensus 207 GDGA~A~vL~~~~~~~~~~--~-~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~ 283 (374)
T 2h84_A 207 ADGSAAYIIGCNPRIEETP--L-YEVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQ 283 (374)
T ss_dssp CCEEEEEEEESSCCTTCCC--C-EEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCcEEEEEecCCCcccCC--c-eeEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999765443222 2 36766654311 0 000 00 0122567899999999
Q ss_pred ----CCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHHHH
Q psy1213 362 ----LSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 362 ----l~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e~v 436 (472)
++++|||+| +|..++...-...+.|| +|.+++.++ --+--+||...|+-...+.+++
T Consensus 284 ~~~~l~~~did~~-~H~~~~~i~d~~~~~lg-----------------l~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~ 345 (374)
T 2h84_A 284 TSTAISAKDCEFL-IHTGGKSILMNIENSLG-----------------IDPKQTKNTWDVYHAYGNMSSASVIFVMDHAR 345 (374)
T ss_dssp SCSCCCSSSSEEE-ECCCCHHHHHHHHHHTT-----------------CCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred cccCCChhhcCEe-ECCCCHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence 999999999 99999976666677888 565555421 0123478988888888887776
Q ss_pred HHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 437 NRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 437 ~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
.+-+ .|++.|..+++.|-.-.+++|+.
T Consensus 346 ~~~~--~Gd~vll~~~G~G~t~~~~ll~~ 372 (374)
T 2h84_A 346 KSKS--LPTYSISLAFGPGLAFEGCFLKN 372 (374)
T ss_dssp TCSC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred hhcC--CCCeEEEEEeccchhhhhhhhee
Confidence 6533 56777776555444445677765
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=251.50 Aligned_cols=287 Identities=15% Similarity=0.119 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCc----cC----EEEEEeecCCC------------------------CCChHHHHHHH-
Q psy1213 71 AHELARHSLIGILQKTGIS-KDL----ID----YIVYGTVIQEV------------------------KTSNIGREAAL- 116 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~-~~~----Id----~vi~g~~~~~~------------------------~~~~~a~~ia~- 116 (472)
...|+++++++||+++|++ |.+ |+ ++++|+..+.. .....+.+++.
T Consensus 1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A 1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence 4568999999999999994 766 44 67777654320 11234667887
Q ss_pred HcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhc
Q psy1213 117 SAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLAT 196 (472)
Q Consensus 117 ~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (472)
.+|+ .+|+++++++|+|++.||+.|++.|++|++|++||+|+|.++...+. .|.
T Consensus 1291 ~lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~-------~f~----------------- 1344 (1887)
T 2uv8_A 1291 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSF-------EFG----------------- 1344 (1887)
T ss_dssp TTCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-------HHH-----------------
T ss_pred HcCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHH-------HHH-----------------
Confidence 4999 68999999999999999999999999999999999999987432110 010
Q ss_pred cCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCc
Q psy1213 197 IRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVR 276 (472)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~ 276 (472)
.| +.+....++++ .| ..|...+ +|++.
T Consensus 1345 --------------------~m-----------~als~~~~e~~------------~g----~~p~~~~-RPfd~----- 1371 (1887)
T 2uv8_A 1345 --------------------NM-----------KATSNTLEEFE------------HG----RTPAEMS-RPATT----- 1371 (1887)
T ss_dssp --------------------HT-----------TCBCCHHHHHH------------TT----CCGGGSC-CTTBT-----
T ss_pred --------------------Hh-----------hhhccchhhhc------------cc----CCCccCc-CCCcc-----
Confidence 00 01000000000 01 1232221 22321
Q ss_pred cCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cc-c-----
Q psy1213 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QL-L----- 346 (472)
Q Consensus 277 ~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~-~----- 346 (472)
..+|++ ++||++++||++.+.|+++|++++++|+|++..++.... +. +
T Consensus 1372 ---------------~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~a 1429 (1887)
T 2uv8_A 1372 ---------------TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTA 1429 (1887)
T ss_dssp ---------------TCCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGG
T ss_pred ---------------cCCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccc
Confidence 134555 899999999999999999999999999999987763210 00 0
Q ss_pred ---------c----------------------------------------------------------------------
Q psy1213 347 ---------L---------------------------------------------------------------------- 347 (472)
Q Consensus 347 ---------~---------------------------------------------------------------------- 347 (472)
.
T Consensus 1430 r~~~G~gt~ps~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~ 1509 (1887)
T 2uv8_A 1430 REHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWG 1509 (1887)
T ss_dssp CCCCSCCSSCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccCCCCcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 0
Q ss_pred -------cHHHHHHHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc
Q psy1213 348 -------GPAYATPQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS 419 (472)
Q Consensus 348 -------~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a 419 (472)
+...++++||+++||+++|||++|+|+++|. .+..+++++... |...+.. .++.++ |+..+++
T Consensus 1510 ~~~~~~d~~~~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~-f~~~gr~---~~~pl~---v~s~Ksl-- 1580 (1887)
T 2uv8_A 1510 NDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEM-MKHLGRS---EGNPVI---GVFQKFL-- 1580 (1887)
T ss_dssp TSTTTTCSSSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHH-HHHHTCC---TTCCEE---EECTHHH--
T ss_pred cchhhchHHHHHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHH-HhhhccC---CCCcEE---EEecccc--
Confidence 0036889999999999999999999999994 577777777521 4322210 111233 5555544
Q ss_pred ccCCCCCcHHHHHHHHHHHHhhc-------------------------------cCCcchhhhhccCcceeEEEEEeCC
Q psy1213 420 IGHPFAATGVRLTVHAANRLVRE-------------------------------DGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 420 ~Ghp~gasG~~~v~e~v~qL~~~-------------------------------~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+|||.||+|+.+++.++++|+.+ ..+++++++++.||.|+.+||+..|
T Consensus 1581 iGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A 1581 TGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp HCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred eechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 69999999999999999999864 1146778889999999999999753
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-25 Score=250.30 Aligned_cols=288 Identities=16% Similarity=0.117 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCc----cC----EEEEEeecCCCC------------------------CChHHHHHHH-
Q psy1213 71 AHELARHSLIGILQKTGIS-KDL----ID----YIVYGTVIQEVK------------------------TSNIGREAAL- 116 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~-~~~----Id----~vi~g~~~~~~~------------------------~~~~a~~ia~- 116 (472)
...|+++++++||+++|++ |.+ |+ ++++|+..++.. ....+..++.
T Consensus 1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A 1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence 4569999999999999998 665 33 566665443310 1123556777
Q ss_pred HcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhc
Q psy1213 117 SAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLAT 196 (472)
Q Consensus 117 ~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (472)
.+|+ .+|+++++++|+|++.||+.|++.|++|++|++||+|+|.++..++...... +
T Consensus 1092 ~LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa~m-----------------g---- 1148 (1688)
T 2pff_A 1092 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNM-----------------K---- 1148 (1688)
T ss_dssp SCCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTTTT-----------------S----
T ss_pred HcCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHHhc-----------------c----
Confidence 6898 5899999999999999999999999999999999999999765432211000 0
Q ss_pred cCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCc
Q psy1213 197 IRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVR 276 (472)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~ 276 (472)
.+ + -+.++++ .| ..|...+ +|++.
T Consensus 1149 ----aL-----------S----------------~~~~e~a---------------~G----~~Pd~~c-RPFd~----- 1172 (1688)
T 2pff_A 1149 ----AT-----------S----------------NTLEEFE---------------HG----RTPAEMS-RPATT----- 1172 (1688)
T ss_dssp ----CS-----------C----------------CTTTTTT---------------SS----CCSSSSC-CSSSS-----
T ss_pred ----cc-----------c----------------cChhhhh---------------cC----CChhhcc-CcCcc-----
Confidence 00 0 0000000 00 1222111 12221
Q ss_pred cCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----c-ccc----
Q psy1213 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----Q-LLL---- 347 (472)
Q Consensus 277 ~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~-~~~---- 347 (472)
..+|.+ .+|||+++||++.+.|+++|++++++|.|++..++.... + .+.
T Consensus 1173 ---------------~rdGfv-------~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~A 1230 (1688)
T 2pff_A 1173 ---------------TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTA 1230 (1688)
T ss_dssp ---------------SCCCCC-------CCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSS
T ss_pred ---------------CCCCCc-------cccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchh
Confidence 133444 899999999999999999999999999999886652100 0 000
Q ss_pred --------------------------------------------------------------------------------
Q psy1213 348 -------------------------------------------------------------------------------- 347 (472)
Q Consensus 348 -------------------------------------------------------------------------------- 347 (472)
T Consensus 1231 r~~~G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~G 1310 (1688)
T 2pff_A 1231 REHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWG 1310 (1688)
T ss_dssp SSCCCCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTT
T ss_pred hhcccccCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence
Q ss_pred -------cHHHHHHHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc
Q psy1213 348 -------GPAYATPQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS 419 (472)
Q Consensus 348 -------~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a 419 (472)
+...++++||+++||+++|||++|+|+++|. .+..+++++... |...+. ..++.++ ++...++
T Consensus 1311 n~f~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~a-f~~~gr---~~g~pl~---V~S~Ksl-- 1381 (1688)
T 2pff_A 1311 NDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEM-MKHLGR---SEGNPVI---GVFQKFL-- 1381 (1688)
T ss_dssp TSSSSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGG-TGGGCC---CTTCCCC---CCCCTTT--
T ss_pred CceecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHH-HhhhCc---CCCCeEE---EEeChhh--
Confidence 0036789999999999999999999999994 355555555421 322111 1112244 6666666
Q ss_pred ccCCCCCcHHHHHHHHHHHHhhc-------------------------------cCCcchhhhhccCcceeEEEEEeCCC
Q psy1213 420 IGHPFAATGVRLTVHAANRLVRE-------------------------------DGQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 420 ~Ghp~gasG~~~v~e~v~qL~~~-------------------------------~g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
+|||.||+|+.+++.++++|+.+ ..+++++++++.||.|+.+||+..|.
T Consensus 1382 iGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~~ 1461 (1688)
T 2pff_A 1382 TGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPDY 1461 (1688)
T ss_dssp TCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSSS
T ss_pred hcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCCc
Confidence 69999999999999999999864 11467788999999999999997654
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=249.12 Aligned_cols=287 Identities=16% Similarity=0.118 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCc----cC----EEEEEeecCCC------------------------CCChHHHHHHH-
Q psy1213 71 AHELARHSLIGILQKTGIS-KDL----ID----YIVYGTVIQEV------------------------KTSNIGREAAL- 116 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~-~~~----Id----~vi~g~~~~~~------------------------~~~~~a~~ia~- 116 (472)
...|+++++++||+++|++ |.+ |+ ++++|+..++. .....+.+++.
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 4568899999999999998 766 44 67888755430 00124567777
Q ss_pred HcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhc
Q psy1213 117 SAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLAT 196 (472)
Q Consensus 117 ~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (472)
.+|+ .+|+++++++|+|++.+|+.|++.|++|++|++||+|+|.++...+. .|.
T Consensus 1266 ~lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~-------~f~----------------- 1319 (1878)
T 2uv9_A 1266 LLSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSY-------EFA----------------- 1319 (1878)
T ss_dssp TCCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHH-------HHH-----------------
T ss_pred hcCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHH-------HHH-----------------
Confidence 4999 58999999999999999999999999999999999999986532110 010
Q ss_pred cCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCc
Q psy1213 197 IRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVR 276 (472)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~ 276 (472)
.| +.+....++++ .| ..|...+ +|++.
T Consensus 1320 --------------------~m-----------~als~~~de~a------------~g----~~p~~~~-RPfd~----- 1346 (1878)
T 2uv9_A 1320 --------------------NM-----------GATSNAKEEFA------------RG----REPGEMS-RPTST----- 1346 (1878)
T ss_dssp --------------------HH-----------TCBCCHHHHHT------------TT----CCTTSSC-CSSBT-----
T ss_pred --------------------Hh-----------hhhccchhhhh------------cC----CCcccCc-CCCcc-----
Confidence 00 01000001110 01 1232211 22221
Q ss_pred cCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--c-cccc-----
Q psy1213 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--Q-LLLG----- 348 (472)
Q Consensus 277 ~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~-~~~~----- 348 (472)
..+|.+ .+||++++||++.+.|+++|++++++|.|++..++.... + .+.+
T Consensus 1347 ---------------~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~a 1404 (1878)
T 2uv9_A 1347 ---------------TRNGFM-------ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTA 1404 (1878)
T ss_dssp ---------------TCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGG
T ss_pred ---------------CCCCCc-------ccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhh
Confidence 134555 899999999999999999999999999999987652210 0 0000
Q ss_pred ---------------------------------------------------------------H----------------
Q psy1213 349 ---------------------------------------------------------------P---------------- 349 (472)
Q Consensus 349 ---------------------------------------------------------------~---------------- 349 (472)
.
T Consensus 1405 r~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~ 1484 (1878)
T 2uv9_A 1405 REKSGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAE 1484 (1878)
T ss_dssp CCCCCSSCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 0
Q ss_pred ---------------HHHHHHHHHHcCCCcCCcCEEEccCcch-HHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCC
Q psy1213 350 ---------------AYATPQVLERAGLSLSDIDAWEVHEAFA-GQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNN 413 (472)
Q Consensus 350 ---------------~~a~~~Al~~Agl~~~dId~~e~hd~f~-~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~ 413 (472)
..++++||+++||+++|||++|+|+++| ..+..+++++... |...+.. .++.++ ++.
T Consensus 1485 a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~-f~~~~r~---~~~pl~---v~s 1557 (1878)
T 2uv9_A 1485 AQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQ-LKHLGRT---KGNAVL---GIF 1557 (1878)
T ss_dssp HHHHHHTSTTTTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHH-HHHHTCC---TTCCEE---EEC
T ss_pred HHHhhcccccccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHH-HhhcCCC---CCCcee---EEe
Confidence 1688999999999999999999999999 4577777777521 3322210 112234 555
Q ss_pred CCCCccccCCCCCcHHHHHHHHHHHHhhc-------------------------------cCCcchhhhhccCcceeEEE
Q psy1213 414 WGGSLSIGHPFAATGVRLTVHAANRLVRE-------------------------------DGQFGLIAACAAGGQGVGMI 462 (472)
Q Consensus 414 ~GG~~a~Ghp~gasG~~~v~e~v~qL~~~-------------------------------~g~~gl~~~~~~GG~~~a~~ 462 (472)
.+++ +|||.||+|+.+++.++++|+++ ..+++++++++.||.|+.+|
T Consensus 1558 ~Ksl--iGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvI 1635 (1878)
T 2uv9_A 1558 QKYL--TGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAI 1635 (1878)
T ss_dssp THHH--HCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEE
T ss_pred cccc--cCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEE
Confidence 5555 69999999999999999999863 11466778899999999999
Q ss_pred EEeCC
Q psy1213 463 IERHP 467 (472)
Q Consensus 463 l~~~~ 467 (472)
|+..|
T Consensus 1636 le~p~ 1640 (1878)
T 2uv9_A 1636 GVHPK 1640 (1878)
T ss_dssp EECTH
T ss_pred EecCC
Confidence 99753
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-24 Score=218.17 Aligned_cols=144 Identities=13% Similarity=0.102 Sum_probs=124.3
Q ss_pred cccccceeeeeecccCCCCccccccccc------------------------C--CceEEEecccccccccCccCCC---
Q psy1213 18 QTITNMSLKSICTSHNVYSPRKSVKDKT------------------------G--KNIVFVDGVRTPFLLSGTDYAN--- 68 (472)
Q Consensus 18 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~------------------------~--~~~~Ivg~~~t~~~~~~~~~~~--- 68 (472)
+.+++..|.|+|+|+|++.++|+++.+. . .+.||.. +|++.+|+...++
T Consensus 20 ~~~~~~~I~gig~~~P~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~I~~--~tGI~~R~~a~~~~~~ 97 (392)
T 3led_A 20 QGVRPAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEK--ASGIKSRYVVAKPGIV 97 (392)
T ss_dssp CBCCCEEEEEEEEECCSEEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCCHHHHHH--HHCCCEEEESCCGGGG
T ss_pred cccCceEEEEEEEeCCCceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCcHHHHHH--ccCCceEEEecCcccc
Confidence 3456788999999999999999887531 1 2567866 8999887643321
Q ss_pred -----------------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecc
Q psy1213 69 -----------------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM 131 (472)
Q Consensus 69 -----------------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~ 131 (472)
.+..+|+.+|+++||+++|+++++||.||+++.+++...|..+..++..+|+ ++++++++.
T Consensus 98 ~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl--~~~~~dv~~ 175 (392)
T 3led_A 98 DPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGL--GGFAFDMNV 175 (392)
T ss_dssp CTTTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTC--CSEEEEEEC
T ss_pred cccccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCC--CCeEEEECC
Confidence 1368999999999999999999999999999988887778899999999999 489999999
Q ss_pred cCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 132 ACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 132 ~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
+|+|+++||..|.++|++|.++++||+|+|.+|.
T Consensus 176 aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~ 209 (392)
T 3led_A 176 ACSSATFGLKTAADFVGGGSVDAVLMVNPEICSG 209 (392)
T ss_dssp GGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred ccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCC
Confidence 9999999999999999999999999999998763
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.90 E-value=9e-24 Score=213.49 Aligned_cols=140 Identities=8% Similarity=-0.011 Sum_probs=119.8
Q ss_pred cccceeeeeecccCCCCcccccccccCCceEEEecccccccccCccCCCC--CHHHHHHHHHHHHHHHcCCCcCccCEEE
Q psy1213 20 ITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGTDYANM--MAHELARHSLIGILQKTGISKDLIDYIV 97 (472)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Ivg~~~t~~~~~~~~~~~~--~~~~La~~A~~~Al~~agi~~~~Id~vi 97 (472)
+.++.|.|+|.|+|++.+.|+.+++...+.++ .-+|++.+|+....++ ++.+|+.+|+++||+++|+++++||.|+
T Consensus 3 ~~~v~I~g~g~ylP~~~~~~~~~~~~~~~~~~--~~~tGi~~r~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi 80 (357)
T 3s3l_A 3 WENLFVSGVAAWLPPLSTAQDAVMAGLLDPAR--SKLRGIESVTVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVL 80 (357)
T ss_dssp CSSCEEEEEEEECCCEEEHHHHHHTTSSCHHH--HHHHCCCEEECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCceEEEEEEEECCCCCCHHHHHHhcCCcHHH--HHHcCceEEEecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 46788999999999988888877765433333 2489998876544445 8999999999999999999999999999
Q ss_pred EEeec---CCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCC--EEEEEeecccC
Q psy1213 98 YGTVI---QEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYD--VVVAGGVEFMS 164 (472)
Q Consensus 98 ~g~~~---~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d--~vLv~G~e~~s 164 (472)
+++.. ++. +.++..++..+|++ ++++++|+.+|+|+++||..|..+|++|.++ ++||+|+|.+|
T Consensus 81 ~~t~~~~~~d~--~~~a~~v~~~lG~~-~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s 149 (357)
T 3s3l_A 81 HSSLWFQGIDL--WPAASYVAHEAVGR-HVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFA 149 (357)
T ss_dssp EECSSCCSSSS--SCHHHHHHHHHTCS-SSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCC
T ss_pred EEeccCCCccc--ccHHHHHHHHhCCC-CCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEeccc
Confidence 99873 433 36799999999996 7999999999999999999999999999999 99999999986
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-23 Score=206.71 Aligned_cols=141 Identities=15% Similarity=0.151 Sum_probs=125.2
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.++.|.+++.|+|++.++|+.+.+... +.||.. +|++.+|+...+++ ..+|+.+|+++||+++|+++++||.+++
T Consensus 3 ~~~~I~~~g~~lP~~~v~n~~~~~~~~~~~~~i~~--~~Gi~~R~~a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~li~ 79 (321)
T 3il6_A 3 NYARISCTSRYVPENCVTNHQLSEMMDTSAAWIHS--RTGISERRIVTQEN-TSDLCHQVAKQLLEKSGKQASEIDFILV 79 (321)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHTTSCHHHHHH--HHSCSEEECCSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred CcEEEEEEEEECCCcEEcHHHHHHHhCCChhhhhh--hcCceEEEECCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 357799999999999999988876543 567754 78888876544455 9999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
++.+++...+.++..++..+|++ ++++++++.+|+|+++||..|..+|++|.++++||+|+|.+|.
T Consensus 80 ~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 145 (321)
T 3il6_A 80 ATVTPDFNMPSVACQVQGAIGAT-EAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSK 145 (321)
T ss_dssp ECSSCSCSSSCHHHHHHHHTTCT-TCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGG
T ss_pred EeCCCCcCCCcHHHHHHHHcCCC-CceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccc
Confidence 99888877788999999999997 5999999999999999999999999999999999999999763
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=239.25 Aligned_cols=308 Identities=12% Similarity=0.073 Sum_probs=211.8
Q ss_pred ccceeeeeecccCCCCccccccccc-----CCceE---------EEecccccccccCccCCCC-----------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKT-----GKNIV---------FVDGVRTPFLLSGTDYANM----------------- 69 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~-----~~~~~---------Ivg~~~t~~~~~~~~~~~~----------------- 69 (472)
.+..|.|+|+|+|++.++|+++.+. ..+.| |.+ +|++.+|.....+.
T Consensus 602 ~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~--~sGI~~r~~~~~~~~~~~~~~~~~~~~~~~~ 679 (979)
T 3tsy_A 602 GPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICD--KSMIKKRYIHLTEEMLEEHPNIGAYMAPSLN 679 (979)
T ss_dssp SCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHH--HTCCCEEECSCCHHHHHHCHHHHSSSSCCHH
T ss_pred CCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHH--hcCcceeeEecChhhhhcCcccccccCCCHH
Confidence 3567999999999999999887765 12444 544 78887764332222
Q ss_pred --------CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCC-CceeeecccCccHHHHH
Q psy1213 70 --------MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDK-TPAHTVTMACISSNQGI 140 (472)
Q Consensus 70 --------~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~-~~~~~v~~~Casg~~al 140 (472)
+..+|+.+|+++||+++|+++++||.|++++..+ ...|..+..++..+|++.. .++++++++|+|+++||
T Consensus 680 ~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al 758 (979)
T 3tsy_A 680 IRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSG-VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVL 758 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHH
Confidence 2667999999999999999999999999998544 4568899999999999622 35899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhH
Q psy1213 141 TTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGH 220 (472)
Q Consensus 141 ~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (472)
..|.++|++|.++++||+|+|.++..... ... .
T Consensus 759 ~~A~~~i~sG~~~~vLvvg~e~~~~~~~~------------------------------~~~-------------~---- 791 (979)
T 3tsy_A 759 RTAKDLAENNAGARVLVVCSEITVVTFRG------------------------------PSE-------------D---- 791 (979)
T ss_dssp HHHHHHHHTSTTCEEEEEEEECTTTTCCC------------------------------CCS-------------S----
T ss_pred HHHHHHHHhCCCCEEEEEEEEecchheeC------------------------------CCc-------------c----
Confidence 99999999999999999999985421100 000 0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceecc
Q psy1213 221 SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAA 300 (472)
Q Consensus 221 ~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~ 300 (472)
+.+ +..
T Consensus 792 ----------------------------------------------------------~~~----------------~~~ 797 (979)
T 3tsy_A 792 ----------------------------------------------------------ALD----------------SLV 797 (979)
T ss_dssp ----------------------------------------------------------CHH----------------HHH
T ss_pred ----------------------------------------------------------CHH----------------HHh
Confidence 000 001
Q ss_pred CCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccc----------------cHHHHHHHHHHHc
Q psy1213 301 NSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLL----------------GPAYATPQVLERA 360 (472)
Q Consensus 301 ~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~----------------~~~~a~~~Al~~A 360 (472)
+|+..+|||+|+||++.+.+..++........++......... .... ...++++++|+++
T Consensus 798 ~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~a 877 (979)
T 3tsy_A 798 GQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPL 877 (979)
T ss_dssp HHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGG
T ss_pred hhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhc
Confidence 2344799999999998765443333222223333322111000 0000 1357889999999
Q ss_pred CCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCC-CccccCCCCCcHHHHHHHHHHHH
Q psy1213 361 GLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGG-SLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 361 gl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG-~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
|++++|||+|.+|..+........+.|| +|.+++..+-- +--+||...||=...+.++..++
T Consensus 878 gl~~~did~~~~Hq~~~~i~~~~~~~lg-----------------l~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~ 940 (979)
T 3tsy_A 878 GISDWNSLFWIAHPGGPAILDAVEAKLN-----------------LDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKS 940 (979)
T ss_dssp TCCCGGGSEEEECCSCHHHHHHHHHHHT-----------------CCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHH
T ss_pred CCCCcccceEEECCCChHHHHHHHHHcC-----------------CChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhh
Confidence 9999999999999999987767778888 56665543200 12379999999888888887766
Q ss_pred hhcc-C------CcchhhhhccCcceeEEEEEeCCCC
Q psy1213 440 VRED-G------QFGLIAACAAGGQGVGMIIERHPDA 469 (472)
Q Consensus 440 ~~~~-g------~~gl~~~~~~GG~~~a~~l~~~~~~ 469 (472)
+... - ..+|..+++.|-.-.+++|+-.++.
T Consensus 941 ~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~~~ 977 (979)
T 3tsy_A 941 LKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPMV 977 (979)
T ss_dssp HHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCBCC
T ss_pred cccccccCCCCcceeEEEEeCCchHHHHHHHHhcccc
Confidence 4221 1 1235555444444566777765543
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-22 Score=206.24 Aligned_cols=300 Identities=12% Similarity=0.090 Sum_probs=208.3
Q ss_pred cceeeeeecccCCCCcccccccccC--------------CceEEEecccccccccCccCCC-------------------
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTG--------------KNIVFVDGVRTPFLLSGTDYAN------------------- 68 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~--------------~~~~Ivg~~~t~~~~~~~~~~~------------------- 68 (472)
+..|.+++.|+|++.++|+++.+.. .+.||.. +|++.+|+...++
T Consensus 12 ~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~~ 89 (387)
T 3a5r_A 12 LATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCE--NSRIEKRYLHVTEEILKENPNIAAYEATSLNV 89 (387)
T ss_dssp CEEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHH--TTTCCEEECSCCHHHHHHCHHHHSSSSSCHHH
T ss_pred CcEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHH--hCCCCceEEecChhhhccCcccccccCCCHHH
Confidence 4679999999999999997776542 0236655 7888876543333
Q ss_pred ------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHHHHH
Q psy1213 69 ------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQGIT 141 (472)
Q Consensus 69 ------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~al~ 141 (472)
++..+|+.+|+++||+++|+++++||.|++++.++ ...+.++..++..+|++...+ +++++.+|+|+++||.
T Consensus 90 r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~ 168 (387)
T 3a5r_A 90 RHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLR 168 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHH
Confidence 47789999999999999999999999999998775 345788999999999974343 8999999999999999
Q ss_pred HHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHH
Q psy1213 142 TGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHS 221 (472)
Q Consensus 142 ~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (472)
.|.++|++|.+++|||+|+|.+|....
T Consensus 169 ~A~~~i~~g~~~~vLvvg~e~~s~~~~----------------------------------------------------- 195 (387)
T 3a5r_A 169 LAKDIAENNKGARVLIVCSEMTTTCFR----------------------------------------------------- 195 (387)
T ss_dssp HHHHHHHHSTTCEEEEEEEECCTTTCC-----------------------------------------------------
T ss_pred HHHHHHHhCCCCEEEEEEEeccchhhc-----------------------------------------------------
Confidence 999999999999999999999764110
Q ss_pred HHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccC
Q psy1213 222 ADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAAN 301 (472)
Q Consensus 222 a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~ 301 (472)
.|... .. + ....
T Consensus 196 --------------------------------------~~~d~---~~--~-------------------------~~~~ 207 (387)
T 3a5r_A 196 --------------------------------------GPSET---HL--D-------------------------SMIG 207 (387)
T ss_dssp --------------------------------------CCCSS---CC--S-------------------------STTH
T ss_pred --------------------------------------CCCcc---ch--h-------------------------hccc
Confidence 00000 00 0 0001
Q ss_pred CCCcCcceeeeeecCHHHHHHcC-CCCcEEEEEeEEeccCCcc---------------cccc--------cHHHHHHHHH
Q psy1213 302 SSFLTDGASACVIMTEAKAKQLG-LKPKAYLRDFVYVSQDPKD---------------QLLL--------GPAYATPQVL 357 (472)
Q Consensus 302 ~~~~~DGAAAvvL~s~e~A~~~g-~~~~a~I~g~~~~~~~p~~---------------~~~~--------~~~~a~~~Al 357 (472)
+...+|||+|+||.+.+.. + ..+..++.+.+.... |.. .+.. ....+++++|
T Consensus 208 ~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 283 (387)
T 3a5r_A 208 QAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIV-PESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAF 283 (387)
T ss_dssp HHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEEC-TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred cceeccceeEEEEecCCCc---cccCCceEEEeeeEEEe-CCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHH
Confidence 2227999999999865421 2 122245555443221 100 0000 1135778999
Q ss_pred HHcCCC-cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHHH
Q psy1213 358 ERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVHA 435 (472)
Q Consensus 358 ~~Agl~-~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e~ 435 (472)
+++|++ .+|| ++=+|-......-...+.|| +|.+++..+ --+--+||...|+-...+.++
T Consensus 284 ~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lg-----------------l~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 345 (387)
T 3a5r_A 284 TPLNISDWNSL-FWIAHPGGPAILDQVTAKVG-----------------LEKEKLKVTRQVLKDYGNMSSATVFFIMDEM 345 (387)
T ss_dssp GGGTCCCGGGS-EEEECCSCHHHHHHHHHHHT-----------------CCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HhcCCCChhhe-eEEECCCCHHHHHHHHHHcC-----------------CChHHhHHHHHHHHhcCCcchhHHHHHHHHH
Confidence 999998 8888 88899887655444556777 565544321 001238999999999999888
Q ss_pred HHHHhhccC--------CcchhhhhccCcceeEEEEEeCCC
Q psy1213 436 ANRLVREDG--------QFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 436 v~qL~~~~g--------~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
+.+=+ +.| ++.|..+++.|-.-.+++|+..|-
T Consensus 346 ~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 385 (387)
T 3a5r_A 346 RKKSL-ENGQATTGEGLEWGVLFGFGPGITVETVVLRSVPV 385 (387)
T ss_dssp HHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHhcc-ccCCCCCCCCcceEEEEEecCcceeeehhheeccc
Confidence 87755 444 666666555444456788887653
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.4e-22 Score=240.57 Aligned_cols=269 Identities=17% Similarity=0.191 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC-------------------CChHHHHHHHHcCCCCCCceee
Q psy1213 72 HELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK-------------------TSNIGREAALSAGFSDKTPAHT 128 (472)
Q Consensus 72 ~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~-------------------~~~~a~~ia~~lGl~~~~~~~~ 128 (472)
..|+++++++||+|||+++++++ +|++|+...++. ....+.+++..+|+ ++|+++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 45899999999999999987765 788987654320 12367899999999 699999
Q ss_pred ecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCccc
Q psy1213 129 VTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPA 208 (472)
Q Consensus 129 v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (472)
|+++|+|++.||++|++.|++|+||.+||+|++.+.. |... ..+.
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~-p~~~-----~~~~----------------------------- 201 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLK-PNSS-----LQFM----------------------------- 201 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCC-HHHH-----HHHH-----------------------------
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccC-HHHH-----HHHc-----------------------------
Confidence 9999999999999999999999999999999997542 1100 0000
Q ss_pred ccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCC
Q psy1213 209 VAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKP 288 (472)
Q Consensus 209 ~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p 288 (472)
+.|.+ .|.. ..++|+.+
T Consensus 202 -------------------------------------------~~~~l---s~~g-~c~~Fd~~---------------- 218 (2512)
T 2vz8_A 202 -------------------------------------------KLGML---SQDG-TCRSFDAE---------------- 218 (2512)
T ss_dssp -------------------------------------------HTTCB---CTTC-SCCSSSTT----------------
T ss_pred -------------------------------------------cCCCC---CCCC-CCCCCCCC----------------
Confidence 00111 0110 11344322
Q ss_pred cccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc--c---cccccHHHHHHHHHHHcCCC
Q psy1213 289 AFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK--D---QLLLGPAYATPQVLERAGLS 363 (472)
Q Consensus 289 ~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~--~---~~~~~~~~a~~~Al~~Agl~ 363 (472)
.+|.+ ++||++++||.+.+.|+ ++++.|+|++...+... . +...+..+++++||++||++
T Consensus 219 ----adG~~-------~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~ 283 (2512)
T 2vz8_A 219 ----GTGYC-------RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPD 283 (2512)
T ss_dssp ----CCCBC-------BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSC
T ss_pred ----CCCcc-------eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 35666 89999999999999885 48999999999876421 1 11234578999999999999
Q ss_pred cCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc-ccCCCCCcHHHHHHHHHHHHhh
Q psy1213 364 LSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS-IGHPFAATGVRLTVHAANRLVR 441 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a-~Ghp~gasG~~~v~e~v~qL~~ 441 (472)
|+||||+|.|.+.|.. +.++++++... |+. .+. -| +- -|..++ +||..+|+|+..++.+++.|++
T Consensus 284 p~~i~yveaHGTgT~~gD~~E~~al~~~-f~~---~~~-----~~---~~-igS~Ks~iGH~~~AaG~~~~ik~~l~l~~ 350 (2512)
T 2vz8_A 284 PESLEYIEAHGTGTKVGDPQELNGIVNA-LCA---TRR-----EP---LL-IGSTKSNMGHPEPASGVAALIKVLLSLEH 350 (2512)
T ss_dssp TTSCCEEECCCCCCTTHHHHHHHHHHHH-HCS---CSS-----SC---CE-EECHHHHHCBCGGGHHHHHHHHHHHHHTT
T ss_pred HHHCCEEEeecCCCCCCCHHHHHHHHHH-hcc---cCC-----CC---ce-eecccccccccccccchhHHHHHHHHHHC
Confidence 9999999999999964 66666666522 321 100 12 22 234444 8999999999999999999986
Q ss_pred cc--------------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 442 ED--------------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 442 ~~--------------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
+- .++.++++++.||.|+++||+..+.
T Consensus 351 ~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~~ 409 (2512)
T 2vz8_A 351 GVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPNSR 409 (2512)
T ss_dssp TBCCCCSSCCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEECCC
T ss_pred CCcCCCCCCCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEccCCc
Confidence 41 1356778899999999999997653
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-22 Score=206.95 Aligned_cols=294 Identities=13% Similarity=0.056 Sum_probs=204.6
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
++.|.++++|+|++.++++.+.+... +.||.. ++++.+|....++++..+|+.+|+++||++ +++++||.|+++
T Consensus 2 ~v~I~~ig~y~P~~~v~~~~l~~~~~~~~~~i~~--~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~ 77 (396)
T 1xpm_A 2 AIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLI--GIGQTEMAVSPVNQDIVSMGANAAKDIITD--EDKKKIGMVIVA 77 (396)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHTTSCHHHHHT--TTCCSEEEECCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEE
T ss_pred ceEEEEEEEeCCCeEecHHHHHHHhCCCHHHHhh--hcCceEEEeCCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEE
Confidence 35799999999999999988775442 345543 677776654446789999999999999988 789999999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHH
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLL 179 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~ 179 (472)
+.++....++++..++..+|++..+++++++++|+|+..||..|.++|++|.++++||+|+|. +....
T Consensus 78 t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s~~~~----------- 145 (396)
T 1xpm_A 78 TESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT-ARYGL----------- 145 (396)
T ss_dssp CSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-ECCCT-----------
T ss_pred eCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh-hcccc-----------
Confidence 988876678899999999999745899999999999999999999999999999999999996 22100
Q ss_pred hhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCC
Q psy1213 180 RANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDI 259 (472)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~ 259 (472)
+
T Consensus 146 -------------------------------~------------------------------------------------ 146 (396)
T 1xpm_A 146 -------------------------------N------------------------------------------------ 146 (396)
T ss_dssp -------------------------------T------------------------------------------------
T ss_pred -------------------------------C------------------------------------------------
Confidence 0
Q ss_pred ccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEec-
Q psy1213 260 LPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS- 338 (472)
Q Consensus 260 ~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~- 338 (472)
. + ++...+|||+|+||.+.+ .++....+.+...
T Consensus 147 -~-------------------------------~-------~~~~~GdGA~A~vl~~~~-------~i~~~~~~~g~~~~ 180 (396)
T 1xpm_A 147 -S-------------------------------G-------GEPTQGAGAVAMVIAHNP-------SILALNEDAVAYTE 180 (396)
T ss_dssp -C-------------------------------S-------SGGGCEEEEEEEEEEESC-------SSEEECSCCEEEEC
T ss_pred -C-------------------------------C-------CCcccccceEEEEeccCC-------ceEEEEeccccccc
Confidence 0 0 011279999999998631 2334444433322
Q ss_pred c-----CCcc---ccccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCC
Q psy1213 339 Q-----DPKD---QLLLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRS 400 (472)
Q Consensus 339 ~-----~p~~---~~~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~ 400 (472)
+ .|.. ....+ ...+++.+|+++|++++|||+|-.|.+++.......+.|. ... .
T Consensus 181 d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~~~~~~~~l~----~~~-~--- 252 (396)
T 1xpm_A 181 DVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALESII----DNA-D--- 252 (396)
T ss_dssp CCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHTTG----GGS-C---
T ss_pred eEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHHHHHHHHHHH----hhc-c---
Confidence 1 1211 00011 3567899999999999999999999999876555566661 000 0
Q ss_pred ccCCCCCCCCc--CC--CC-CCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeCCC
Q psy1213 401 SKVGVPDLNKF--NN--WG-GSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 401 ~~~G~~p~~~v--N~--~G-G~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
| +|.+++ |+ += =+--+||...||-...+.+++.+=+-+.|++.+..+.+.|-...+++++..++
T Consensus 253 ---~-~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l~~Gd~ill~s~GsG~~~~~~~~~v~~~ 321 (396)
T 1xpm_A 253 ---E-TTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATLVEG 321 (396)
T ss_dssp ---H-HHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCCCTTCEEEEEEEETTTEEEEEEEEECTT
T ss_pred ---c-CCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEECcchhheEEEEEEccc
Confidence 0 121111 11 00 01237899988888888887765222357777776555443345567776554
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9.1e-22 Score=201.18 Aligned_cols=304 Identities=15% Similarity=0.094 Sum_probs=207.9
Q ss_pred ccceeeeeecccCCCCcccccccccC-----CceE---------EEecccccccccCccCCCC-----------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTG-----KNIV---------FVDGVRTPFLLSGTDYANM----------------- 69 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~-----~~~~---------Ivg~~~t~~~~~~~~~~~~----------------- 69 (472)
....|.|+|+|+|++.++|+.+.+.. .+.| |.. +|++.+|....+++
T Consensus 15 ~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~e~~~~~~~~~~~~~p~~~ 92 (393)
T 3ov2_A 15 GPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCE--KTMVKKRYLHLTEEILKERPKLCSYKEASFD 92 (393)
T ss_dssp SCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHH--HTCCCEEECSCCHHHHHHSGGGGSSSSCCHH
T ss_pred CCeEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHH--hcCCceEEeecChhhhccCcccccCCCCCHH
Confidence 45679999999999999998877642 2444 544 78888776443332
Q ss_pred --------CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHHHH
Q psy1213 70 --------MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQGI 140 (472)
Q Consensus 70 --------~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~al 140 (472)
+..+|+.+|+++||+++|+++++||.||+++.++ ...|.++..++..||++...+ +++++.+|+|+++||
T Consensus 93 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al 171 (393)
T 3ov2_A 93 DRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAML 171 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHH
Confidence 4789999999999999999999999999999888 557889999999999974333 899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhH
Q psy1213 141 TTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGH 220 (472)
Q Consensus 141 ~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (472)
..|.++|++|.++++||+|+|.+|..-.. |. + .
T Consensus 172 ~~A~~~i~sg~~~~vLvvg~E~~s~~~~~-------------------------------------~~--d----~---- 204 (393)
T 3ov2_A 172 RIAKDLAENNRGARVLVVACEITVLSFRG-------------------------------------PN--E----G---- 204 (393)
T ss_dssp HHHHHHHHHSTTCEEEEEEEECGGGTCCC-------------------------------------CC--T----T----
T ss_pred HHHHHHHHcCCCCEEEEEEEeccchhccC-------------------------------------Cc--c----c----
Confidence 99999999999999999999998521000 00 0 0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceecc
Q psy1213 221 SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAA 300 (472)
Q Consensus 221 ~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~ 300 (472)
+.+++ .
T Consensus 205 ----------------------------------------------------------~~~~~----------------~ 210 (393)
T 3ov2_A 205 ----------------------------------------------------------DFEAL----------------A 210 (393)
T ss_dssp ----------------------------------------------------------CHHHH----------------H
T ss_pred ----------------------------------------------------------chhhh----------------c
Confidence 00000 0
Q ss_pred CCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--------------cccc--------cHHHHHHHHHH
Q psy1213 301 NSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--------------QLLL--------GPAYATPQVLE 358 (472)
Q Consensus 301 ~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--------------~~~~--------~~~~a~~~Al~ 358 (472)
.|...+|||+|+||...+.. .. ..+...+...+........ .+.. ....+++.+|+
T Consensus 211 ~~~lFGDGAaA~vl~~~~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 288 (393)
T 3ov2_A 211 GQAGFGDGAGAVVVGADPLE-GI-EKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALA 288 (393)
T ss_dssp HHHHBCCEEEEEEEESSCCT-TT-CCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHG
T ss_pred ccccccCccEEEEEEecCCC-cc-cCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHH
Confidence 12227999999999875421 11 1222334333321110000 0001 11467899999
Q ss_pred HcCCCc-CCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHHHH
Q psy1213 359 RAGLSL-SDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 359 ~Agl~~-~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e~v 436 (472)
++|+++ +|| +|=+|-......-...+.|| +|.+++-.+ --+--+||...||=...+.+++
T Consensus 289 ~~gl~~~~di-~~v~Hq~n~~i~~~v~~~Lg-----------------l~~ek~~~s~~~l~~~GNtssAsip~~L~~~~ 350 (393)
T 3ov2_A 289 PLGVREWNDV-FWVAHPGNWAIIDAIEAKLQ-----------------LSPDKLSTARHVFTEYGNMQSATVYFVMDELR 350 (393)
T ss_dssp GGTCCSGGGS-EEEECCCCHHHHHHHHHHHT-----------------CCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HcCCCcccCc-EEEECCCChHHHHHHHHHcC-----------------CCHHHHHHHHHHHHHhCChHHhHHHHHHHHHH
Confidence 999997 888 88889888766666678888 565554321 0012378999888888887777
Q ss_pred HHH-h-hc--cC---CcchhhhhccCcceeEEEEEeCCC
Q psy1213 437 NRL-V-RE--DG---QFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 437 ~qL-~-~~--~g---~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
.+. + ++ .| ++.|..+++.|-.-.++||++.|-
T Consensus 351 ~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 389 (393)
T 3ov2_A 351 KRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSMPL 389 (393)
T ss_dssp HHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeEEccc
Confidence 652 1 11 23 566666555444556788888754
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-22 Score=204.47 Aligned_cols=141 Identities=10% Similarity=-0.014 Sum_probs=118.9
Q ss_pred ccceeeeeecccCCCCcccccccccC-----Cc---------eEEEecccccccccCccCCCC-----------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTG-----KN---------IVFVDGVRTPFLLSGTDYANM----------------- 69 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~-----~~---------~~Ivg~~~t~~~~~~~~~~~~----------------- 69 (472)
....|.|+|+|+|++.++|+.+.+.. .+ .||.. +|++.+|....+++
T Consensus 9 ~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~e~~~~~~~~~~~~~p~~~ 86 (387)
T 3oit_A 9 GLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQ--EMGVQRRYLHHTEEMLSAHPEFVDRDAPSLD 86 (387)
T ss_dssp SCCEEEEEEEECCSEEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHH--TSSCCEEEESCCHHHHHHCGGGTCTTSCCHH
T ss_pred CCeEEEEEEeeCCCceecHHHHHHHHHHHhCccchHHHHHHHHHHHH--hcCcceeeeecCHHHhccCccccccCCCCHH
Confidence 55779999999999999987776542 11 15544 78888776443332
Q ss_pred --------CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHHHH
Q psy1213 70 --------MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQGI 140 (472)
Q Consensus 70 --------~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~al 140 (472)
+..+|+.+|+++||+++|+++++||.||+++.++ ...|.++..++..+|++...+ +++++.+|+|+++||
T Consensus 87 ~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al 165 (387)
T 3oit_A 87 ARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAAL 165 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHH
Confidence 5789999999999999999999999999999887 557889999999999974333 899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecccC
Q psy1213 141 TTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 141 ~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
..|..+|++|.++++||+|+|.+|
T Consensus 166 ~~A~~~i~sg~~~~vLvvg~E~~s 189 (387)
T 3oit_A 166 RLAKDLAENSRGARVLVVAAELTL 189 (387)
T ss_dssp HHHHHHHHSSTTCEEEEEEEECGG
T ss_pred HHHHHHHhcCCCCEEEEEEEeccc
Confidence 999999999999999999999986
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-22 Score=204.90 Aligned_cols=300 Identities=14% Similarity=0.093 Sum_probs=208.6
Q ss_pred ccceeeeeecccCCCCcccccccccCC--------------ceEEEecccccccccCccCCC------------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--------------NIVFVDGVRTPFLLSGTDYAN------------------ 68 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--------------~~~Ivg~~~t~~~~~~~~~~~------------------ 68 (472)
.+..|.+++.|+|++.++|+++.+... ..||.. +|++.+|+...++
T Consensus 37 ~~~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~ 114 (413)
T 1xes_A 37 GFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICE--RSAIKQRYMYLTEEILKKNPDVCAFVEVPSL 114 (413)
T ss_dssp SCEEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHH--TSCCCEEECSCCHHHHHTCHHHHSSSSSCCH
T ss_pred CCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHh--hcCcCceEEeeChhhhccCccccccccCCCH
Confidence 456799999999999999987765320 236654 8888876543332
Q ss_pred --------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-ceeeecccCccHHHH
Q psy1213 69 --------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-PAHTVTMACISSNQG 139 (472)
Q Consensus 69 --------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~Casg~~a 139 (472)
++..+|+.+|+++||+++|+++++||.|++++.++ ...++++..++..+|++... ++++++.+|+|+++|
T Consensus 115 ~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~A 193 (413)
T 1xes_A 115 DARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTV 193 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCcCCccchhceecCccHHHHHH
Confidence 26789999999999999999999999999998877 34578899999999997434 389999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchh
Q psy1213 140 ITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMG 219 (472)
Q Consensus 140 l~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (472)
|..|.++|++|.++++||+|+|.+|..... |. + .
T Consensus 194 L~~A~~~i~~G~~~~vLvvg~E~~s~~~~~-------------------------------------~~--d----~--- 227 (413)
T 1xes_A 194 LRMAKDLAENNRGARVLVICSETTAVTFRG-------------------------------------PS--E----T--- 227 (413)
T ss_dssp HHHHHHHHHTSTTCCEEEEEEECTTTTCCC-------------------------------------CC--T----T---
T ss_pred HHHHHHHHHcCCCCEEEEEEehhhhhhhcC-------------------------------------CC--c----c---
Confidence 999999999999999999999997641100 00 0 0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceec
Q psy1213 220 HSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTA 299 (472)
Q Consensus 220 ~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~ 299 (472)
++ ++ .
T Consensus 228 -----------------------------------------~~------------------~~----------------~ 232 (413)
T 1xes_A 228 -----------------------------------------HL------------------DS----------------L 232 (413)
T ss_dssp -----------------------------------------CH------------------HH----------------H
T ss_pred -----------------------------------------ch------------------hh----------------c
Confidence 00 00 0
Q ss_pred cCCCCcCcceeeeeecCHHHHHHcCC-CCcEEEEEeEEeccCCcc---------------cccc--------cHHHHHHH
Q psy1213 300 ANSSFLTDGASACVIMTEAKAKQLGL-KPKAYLRDFVYVSQDPKD---------------QLLL--------GPAYATPQ 355 (472)
Q Consensus 300 ~~~~~~~DGAAAvvL~s~e~A~~~g~-~~~a~I~g~~~~~~~p~~---------------~~~~--------~~~~a~~~ 355 (472)
..+...+|||+|+||.+.+.. +. .+..++.+.+.... |.. .+.. ....++++
T Consensus 233 ~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 308 (413)
T 1xes_A 233 VGQALFGDGASALIVGADPIP---QVEKACFEIVWTAQTVV-PNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVE 308 (413)
T ss_dssp HHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEEC-TTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHH
T ss_pred ccceeEecccEEEEEecCCCc---cccCCceEEEeeeeEEc-CCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHH
Confidence 011127999999999865421 21 12245665544211 100 0000 11457789
Q ss_pred HHHHcCCC-cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHH
Q psy1213 356 VLERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 356 Al~~Agl~-~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~ 433 (472)
+|+++|++ .+|| +|=+|-......-...+.|| +|.+++-.+ --+--+||...|+-...+.
T Consensus 309 ~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lg-----------------l~~ek~~~s~~~l~~~GNtssAsi~~~L~ 370 (413)
T 1xes_A 309 AFSQFKISDWNKL-FWVVHPGGRAILDRVEAKLN-----------------LDPTKLIPTRHVMSEYGNMSSACVHFILD 370 (413)
T ss_dssp HHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHTT-----------------CCTTTTHHHHHHHHHHCBCGGGHHHHHHH
T ss_pred HHHhcCCCCccce-eEEECCCCHHHHHHHHHHcC-----------------CChHHhHHHHHHHHhcCcCchhhHHHHHH
Confidence 99999998 8888 78889887655445567787 565554321 0012389999999999998
Q ss_pred HHHHHHhhccC--------CcchhhhhccCcceeEEEEEeCC
Q psy1213 434 HAANRLVREDG--------QFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 434 e~v~qL~~~~g--------~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+++.+=+ +.| ++.|..+++.|-.-.++||+..|
T Consensus 371 ~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~ 411 (413)
T 1xes_A 371 QTRKASL-QNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVP 411 (413)
T ss_dssp HHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHHhcc-ccCCCCCCCCcceEEEEEecCCcEEeEEEEEecc
Confidence 8887755 444 66666655544455678888765
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=194.16 Aligned_cols=142 Identities=14% Similarity=0.083 Sum_probs=115.3
Q ss_pred ccceeeeeecccCCCCcccccccccCCc--------eE---EEecccccccccCccCCCC--------------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGKN--------IV---FVDGVRTPFLLSGTDYANM-------------------- 69 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~--------~~---Ivg~~~t~~~~~~~~~~~~-------------------- 69 (472)
.++.|.++++|+|++.++++.+....+. .+ |.. +|++.+|.....+.
T Consensus 30 ~~v~I~gigt~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~~~p~~~~~~~ps~~~r~~~~~ 107 (465)
T 3e1h_A 30 LGLSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVLAINR--YTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFM 107 (465)
T ss_dssp CCEEEEEEEEECCSSCCBCTHHHHHTCSSSCCCHHHHHHHHHTT--TSCCCCBCCSSCTTCGGGSSSSCCCHHHHHHHHH
T ss_pred CCEEEEEEEEECCCcEEcHHHHHHHHHHhcccchhHHHHHHHHH--hcCCceEEEeecccCcccccccCCCHHHHHHHHH
Confidence 4678999999999999999877433221 11 222 68887765432211
Q ss_pred -CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-cccCccHHHHHHHHHHHH
Q psy1213 70 -MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-TMACISSNQGITTGIGLI 147 (472)
Q Consensus 70 -~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~Casg~~al~~A~~~I 147 (472)
...+|+.+|+++||+++|+++++||.||+++++ +...|.++..++..||++....+++| +.+|+++++||..|.++|
T Consensus 108 ~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i 186 (465)
T 3e1h_A 108 SDGVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLC 186 (465)
T ss_dssp HHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Confidence 135899999999999999999999999999877 55678899999999999743338999 799999999999999999
Q ss_pred Hc----CCCCEEEEEeecccCC
Q psy1213 148 AA----GAYDVVVAGGVEFMSD 165 (472)
Q Consensus 148 ~s----G~~d~vLv~G~e~~s~ 165 (472)
++ |.+++|||+|+|.+|.
T Consensus 187 ~a~~~~G~~~~vLVvg~E~~S~ 208 (465)
T 3e1h_A 187 LGHTARGKPARILVLALEVSTT 208 (465)
T ss_dssp HHHHHTTCCCEEEEEEEECCGG
T ss_pred hcccccCCCCEEEEEEEeecch
Confidence 97 9999999999999764
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-21 Score=196.90 Aligned_cols=140 Identities=12% Similarity=0.043 Sum_probs=121.1
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
++.|.++++|+|++.++|+.+.+... +.||.. ++++.++....++++..+|+.+|+++||++++ +++||.|+++
T Consensus 7 ~v~I~~~g~y~P~~~v~~~~l~~~~g~~~~~~~~--~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~ 82 (388)
T 3v4n_A 7 TIGIDKISFFVPPYYIDMTALAEARNVDPGKFHI--GIGQDQMAVNPISQDIVTFAANAAEAILTKED--KEAIDMVIVG 82 (388)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHTTSCTHHHHT--TTCCCEEECCCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEE
T ss_pred eEEEEEEEEECCCeEEcHHHHHHHhCCCHHHHHH--HhCceEEEECCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEEE
Confidence 67899999999999999988876532 445432 56666655444678999999999999999987 9999999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
+.+++...+..+..++..||++..+++++++.+|+|+..||..|..+|++|.++.+||+|+|.++.
T Consensus 83 t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~ 148 (388)
T 3v4n_A 83 TESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKY 148 (388)
T ss_dssp CSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECC
T ss_pred eccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcc
Confidence 998887778899999999999744899999999999999999999999999999999999998753
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.7e-20 Score=191.08 Aligned_cols=139 Identities=8% Similarity=0.009 Sum_probs=117.6
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCcc--CCCCCHHHHHHHHHHHHHHHcCCCcCccCEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTD--YANMMAHELARHSLIGILQKTGISKDLIDYIV 97 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~--~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi 97 (472)
++.|.++++|+|++.++++.+.+... +.|| +++++.+... .++++..+|+.+|+++||+++|+++++||.|+
T Consensus 3 ~v~I~~ig~y~P~~~v~~~~l~~~~g~~~~~~----~~g~G~~~~~~~~~~e~~~~La~~Aa~~aL~~agi~~~~Id~li 78 (450)
T 2f82_A 3 NVGILAMDIYFPPTCVQQEALEAHDGASKGKY----TIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLE 78 (450)
T ss_dssp SCEEEEEEEECCSEEEEHHHHHHHTTCCTTTT----TTTSCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ceEEEEEEEECCCeeccHHHHHHHhCCCHHHh----hhhhCceeeeeCCCCCCHHHHHHHHHHHHHHHcCcCHHHCCEEE
Confidence 57899999999999999988775543 3333 4444433222 25789999999999999999999999999999
Q ss_pred EEeecCCCCCChHHHHHHHHcCC--CCCCceeeecccCccHHHHHHHHHHHHHcCCC--CEEEEEeecccC
Q psy1213 98 YGTVIQEVKTSNIGREAALSAGF--SDKTPAHTVTMACISSNQGITTGIGLIAAGAY--DVVVAGGVEFMS 164 (472)
Q Consensus 98 ~g~~~~~~~~~~~a~~ia~~lGl--~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~--d~vLv~G~e~~s 164 (472)
+++.+++...+.++..++..+|+ +..+++++++++|+|+..||..|.++|++|.+ +++||+|+|.++
T Consensus 79 ~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 79 VGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp EECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC
T ss_pred EEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc
Confidence 99988877678899999999998 33789999999999999999999999999998 999999999763
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.9e-18 Score=179.14 Aligned_cols=139 Identities=10% Similarity=0.059 Sum_probs=114.8
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.++.|.++++|+|++.+.++.+.+... +.||+. .+++.++....++++..+|+.+|+++||+++|+++++||.|++
T Consensus 23 ~~vgI~aig~y~P~~~v~~~el~~~~g~~~~~~~~--~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~ 100 (478)
T 2p8u_A 23 MDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTI--GLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEV 100 (478)
T ss_dssp HCCEEEEEEEECCSEEEEHHHHHHHHTCCTTCCCC--CCCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred CceEEEEEEEECCCeEecHHHHHHHhCCChhHhec--ccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 468899999999999988877764332 223322 3444444333357899999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHH---HHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCC--CCEEEEEeecc
Q psy1213 99 GTVIQEVKTSNIGREAA---LSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGA--YDVVVAGGVEF 162 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia---~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~--~d~vLv~G~e~ 162 (472)
++.++....+..+..++ ..+|++ .+++++++.+|+++..||..|..+|++|. ++++||+|+|.
T Consensus 101 ~T~t~~~~~ps~a~~v~~~L~~lG~~-~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 101 GTETIIDKSKSVKTNLMQLFEESGNT-DIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp ECSCCSCSSSCHHHHHGGGTTTTTCC-CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred EccCCcccCccHHHHHHHHHhhcCCC-CceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 99888766788899999 455565 78999999999999999999999999999 99999999994
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.6e-19 Score=180.98 Aligned_cols=114 Identities=14% Similarity=0.107 Sum_probs=101.8
Q ss_pred ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee
Q psy1213 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 48 ~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~ 127 (472)
+.||.. +|+|.+|+.... .+..+|+.+|+++||+++|+++++||.||++++++. ..|.++..++..+|++..++.+
T Consensus 117 ~e~i~~--rtgi~~R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~-~~P~~a~~v~~~LGl~~~~~~~ 192 (413)
T 3v7i_A 117 LKAVPA--SQTVQERTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTP-ALPGLDVALANRLPLRGDTMLL 192 (413)
T ss_dssp HHTSCC--CCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSC-CSSCHHHHHHHHTTCCTTCEEE
T ss_pred ccceec--CCCHHHhCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCC-CcCHHHHHHHHHhCCCCCceEE
Confidence 557765 999998765433 478999999999999999999999999999998874 5788999999999997557889
Q ss_pred ee-cccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 128 TV-TMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 128 ~v-~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
++ +.+|+|+++||..|.++|++|.+++|||+|+|.+|.
T Consensus 193 ~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~ 231 (413)
T 3v7i_A 193 PATQWACVAGTRSLALAADLVAADPDRVVLVVISEALST 231 (413)
T ss_dssp EESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGG
T ss_pred EeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccc
Confidence 99 999999999999999999999999999999999864
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=164.31 Aligned_cols=102 Identities=18% Similarity=0.191 Sum_probs=88.1
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCcc
Q psy1213 56 RTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACIS 135 (472)
Q Consensus 56 ~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Cas 135 (472)
.+.|+++. .+++..+|+.+|+++||+++|++++|||.+++++.++. ...+..++..+|+ |+++|+++|+|
T Consensus 43 d~~fG~~t---~e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q---~~~A~~va~~Lgi----pafdV~~ACsg 112 (347)
T 3lma_A 43 EMHCNQKN---WEMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQ---NVTANYVARHLKI----PFLCLFGACST 112 (347)
T ss_dssp STTTTSSS---HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS---STTHHHHHHHHCC----CEEEBCCSTTH
T ss_pred ccccCCcC---ccHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCc---hhHHHHHHHHhCC----CEEEecChhHH
Confidence 45666532 24678899999999999999999999999999998772 2378888888864 69999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEeecccCCCc
Q psy1213 136 SNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167 (472)
Q Consensus 136 g~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~ 167 (472)
++++|..|..+|++|.+++|||+|+|++|+.+
T Consensus 113 ~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~ae 144 (347)
T 3lma_A 113 SMESIAISSALIDGGFAKRALAATSSHNATAE 144 (347)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEECGGGTT
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEeccccchh
Confidence 99999999999999999999999999988643
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-17 Score=171.94 Aligned_cols=138 Identities=10% Similarity=0.010 Sum_probs=120.5
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.|++|.++++|+|++.++|+++++... +.||.. +|++.+|+...+++++.+|+++|+++||+++|++|++||.|++
T Consensus 4 ~~VgI~~~g~y~P~~~v~~~~l~~~~~~~~~~i~~--~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~ 81 (460)
T 2wya_A 4 KDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTV--GLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEV 81 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHTTCCTTCCCC--CCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHhCCCHHHHHH--hhCcEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 368899999999999999999887654 668866 7888887655678999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCC--CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEee
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFS--DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGV 160 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~--~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~ 160 (472)
++.+++...+..+..++..+|++ .++.+++++.+|+++.+||..|.++|++|..+.++++.+
T Consensus 82 aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~ 145 (460)
T 2wya_A 82 GTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVV 145 (460)
T ss_dssp ECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEE
T ss_pred EeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEE
Confidence 99999888899999999998642 257889999999999999999999999998876655543
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=87.82 E-value=0.92 Score=44.46 Aligned_cols=88 Identities=20% Similarity=0.150 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-------ceee-------ecccCccH-HH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-------PAHT-------VTMACISS-NQ 138 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-------~~~~-------v~~~Casg-~~ 138 (472)
.+.+++.+.|+|+|++++|+|.++.|.... .+..+...+..++|++... ..|+ =.++|+.+ ..
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D~ivtgdL~q--~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v 285 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYDLILTGDLSG--VGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVV 285 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEESCHH--HHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEecCChHH--HHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHH
Confidence 445666899999999999999998753111 1223455677777876211 1111 12345444 33
Q ss_pred HHHHHHHHHHcCCCCEEEEEeeccc
Q psy1213 139 GITTGIGLIAAGAYDVVVAGGVEFM 163 (472)
Q Consensus 139 al~~A~~~I~sG~~d~vLv~G~e~~ 163 (472)
.-.+-...++.|+.+++|++++-.+
T Consensus 286 ~~~~~~~~~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 286 TFAHIFKEIEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HHHTHHHHHHTTSCSEEEEEEEEEC
T ss_pred HHHHHHHHHhcCcccEEEEEecccc
Confidence 3355567899999999999998763
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=84.87 E-value=3 Score=40.95 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccCcch-----HHHHHHHHhcC
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHEAFA-----GQILANLKAMD 388 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd~f~-----~~~~~~~ealg 388 (472)
...|+++||+++|++++|||.+-+-.+.. .......+.||
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lG 114 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELD 114 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcC
Confidence 36889999999999999999887643322 22333445666
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=84.22 E-value=2.6 Score=41.16 Aligned_cols=82 Identities=16% Similarity=0.109 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee----ecccCccHHHHHHHHHHH--H
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT----VTMACISSNQGITTGIGL--I 147 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~----v~~~Casg~~al~~A~~~--I 147 (472)
...++++++|+++|++++|||.++.-. .....-..+...+|++......+ =|+.++|-..+|..+.+. +
T Consensus 247 ~~~~~i~~~l~~~gl~~~did~~v~Hq-----~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~~ 321 (345)
T 3s21_A 247 LAQKTFVAAKQVLGWAVEELDQFVIHQ-----VSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGRL 321 (345)
T ss_dssp HHHHHHHHHHHHHCCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCC-----CCHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHcCCC
Confidence 445677899999999999999887632 12334567888999973221122 245556666666665554 4
Q ss_pred HcCCCCEEEEEeecc
Q psy1213 148 AAGAYDVVVAGGVEF 162 (472)
Q Consensus 148 ~sG~~d~vLv~G~e~ 162 (472)
+.| |.+|++|+..
T Consensus 322 ~~G--d~vll~~~G~ 334 (345)
T 3s21_A 322 KKG--DRIALLGIGS 334 (345)
T ss_dssp CTT--CEEEEEEEET
T ss_pred CCC--CEEEEEEECh
Confidence 444 7888888754
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=83.64 E-value=2.7 Score=40.20 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee----cccCccHHHHHHHHHHHHHc
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV----TMACISSNQGITTGIGLIAA 149 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~Casg~~al~~A~~~I~s 149 (472)
-..++++++|+++|++++|||.++.-.. .......+...+|++......+. +..+++...+|..+ ++.
T Consensus 213 ~~~~~i~~al~~agl~~~did~~~~H~~-----~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~~~ 284 (313)
T 1zow_A 213 IMGDASTRVVEKANLTSDDIDLFIPHQA-----NIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---LKN 284 (313)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---HHc
Confidence 4567889999999999999998766321 22334456778888632111111 45556666666554 444
Q ss_pred CC---CCEEEEEeecc
Q psy1213 150 GA---YDVVVAGGVEF 162 (472)
Q Consensus 150 G~---~d~vLv~G~e~ 162 (472)
|+ -|.+|+.++-.
T Consensus 285 ~~~~~g~~vl~~~~G~ 300 (313)
T 1zow_A 285 GKLKDDDTIVLVGFGG 300 (313)
T ss_dssp TCCCTTCEEEEEEEET
T ss_pred CCCCCCCEEEEEEEch
Confidence 43 47888887754
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=83.35 E-value=3 Score=40.23 Aligned_cols=85 Identities=14% Similarity=0.034 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee-ee----cccCccHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH-TV----TMACISSNQGITTGIGLI 147 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~v----~~~Casg~~al~~A~~~I 147 (472)
+...++++++|+++|++++|||.++.-. ........+...+|++...... ++ |+.+++...+|.++.+.-
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H~-----~~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~~ 306 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQ-----ANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTG 306 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECC-----SCHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHcC
Confidence 3456788999999999999999887632 1223445677889986431222 11 344455455555443321
Q ss_pred HcCCCCEEEEEeecc
Q psy1213 148 AAGAYDVVVAGGVEF 162 (472)
Q Consensus 148 ~sG~~d~vLv~G~e~ 162 (472)
+....|.+|+.++-.
T Consensus 307 ~~~~g~~~l~~~~G~ 321 (335)
T 1u6e_A 307 AAKPGDLALLIGYGA 321 (335)
T ss_dssp SSCTTCEEEEEEEET
T ss_pred CCCCCCEEEEEEEeh
Confidence 112347888887743
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=82.89 E-value=2.7 Score=40.66 Aligned_cols=82 Identities=13% Similarity=0.124 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee----cccCccHHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV----TMACISSNQGITTGIGLIA 148 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~Casg~~al~~A~~~I~ 148 (472)
+...++++++|+++|++++|||.++.-.. .......+...+|++......++ |+.+++...+|..+ ++
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~~-----~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~ 295 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQA-----NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---LR 295 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCC-----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---HH
Confidence 45567889999999999999998866321 22344567888998632111222 34555555555544 44
Q ss_pred cCC---CCEEEEEeecc
Q psy1213 149 AGA---YDVVVAGGVEF 162 (472)
Q Consensus 149 sG~---~d~vLv~G~e~ 162 (472)
.|+ -|.+|+.++..
T Consensus 296 ~~~~~~G~~vll~~~G~ 312 (331)
T 2x3e_A 296 QGILRDGGNMVLTGFGA 312 (331)
T ss_dssp TTCSCTTCEEEEEEEET
T ss_pred hCCCCCCCEEEEEEEeH
Confidence 443 37898888764
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=82.85 E-value=2.3 Score=41.88 Aligned_cols=83 Identities=17% Similarity=0.032 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee----ecccCccHHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT----VTMACISSNQGITTGIGLIA 148 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~----v~~~Casg~~al~~A~~~I~ 148 (472)
+...++++++|+++|++++|||.++.-.. ....-..++..+|++...-..+ =|+.++|-..+|..+.+.++
T Consensus 254 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~-----n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l~ 328 (359)
T 3h78_A 254 QTLVRIAGEMLAAHELTLDDIDHVICHQP-----NLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDIQ 328 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhCC
Confidence 34557889999999999999998865321 2334567888899974222222 24556666777777666654
Q ss_pred cCCCCEEEEEeecc
Q psy1213 149 AGAYDVVVAGGVEF 162 (472)
Q Consensus 149 sG~~d~vLv~G~e~ 162 (472)
.| |.+|++|+-.
T Consensus 329 ~G--d~vll~~fG~ 340 (359)
T 3h78_A 329 PG--QRVLVLTYGS 340 (359)
T ss_dssp TT--CEEEEEEEET
T ss_pred CC--CEEEEEEEch
Confidence 55 7888887644
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=82.79 E-value=3.9 Score=39.08 Aligned_cols=80 Identities=14% Similarity=0.106 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee-----ecccCccHHHHHHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT-----VTMACISSNQGITTGIGLIA 148 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~-----v~~~Casg~~al~~A~~~I~ 148 (472)
-..++++++|+++|++++|||.++.-.. .......+...+|++. ..... =+..+++...+|..+ ++
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H~~-----~~~~~d~i~~~lg~~~-~~~~~~~~~~Gn~~~As~~~~L~~~---~~ 289 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPHQA-----NLRIISATAKKLGMSM-DNVVVTLDRHGNTSAASVPCALDEA---VR 289 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECCS-----CHHHHHHHHHHTTCCG-GGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHcCCCH-HHhHhhHhhhCcHHHHHHHHHHHHH---HH
Confidence 4567889999999999999998766321 2234456788899863 22222 144556666666554 44
Q ss_pred cCC---CCEEEEEeecc
Q psy1213 149 AGA---YDVVVAGGVEF 162 (472)
Q Consensus 149 sG~---~d~vLv~G~e~ 162 (472)
.|. -|.+|++++..
T Consensus 290 ~~~~~~G~~vll~~~G~ 306 (317)
T 1hnj_A 290 DGRIKPGQLVLLEAFGG 306 (317)
T ss_dssp TTCSCTTCEEEEEEEET
T ss_pred hCCCCCCCEEEEEEEch
Confidence 443 37888888754
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=82.60 E-value=3.6 Score=39.71 Aligned_cols=26 Identities=31% Similarity=0.298 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccC
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHE 374 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd 374 (472)
...|+++||+++|++++|||.+-+-.
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t 81 (321)
T 3il6_A 56 CHQVAKQLLEKSGKQASEIDFILVAT 81 (321)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 36789999999999999999887643
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=82.19 E-value=4.3 Score=39.34 Aligned_cols=82 Identities=17% Similarity=0.226 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee----cccCccHHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV----TMACISSNQGITTGIGLIA 148 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~Casg~~al~~A~~~I~ 148 (472)
+...++++++|+++|++++|||.++.-.. ....-..+...+|++......++ |+.++|-..+|..+ ++
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~Hq~-----~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~---~~ 305 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIPHQA-----NIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVA---VR 305 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHH---HH
Confidence 45567889999999999999998865321 23355678889999742222222 33444444455444 44
Q ss_pred cCC---CCEEEEEeecc
Q psy1213 149 AGA---YDVVVAGGVEF 162 (472)
Q Consensus 149 sG~---~d~vLv~G~e~ 162 (472)
.|+ -|.+|++|+-.
T Consensus 306 ~g~~~~Gd~vll~~~G~ 322 (333)
T 4dfe_A 306 DGRIKRGQNVLIEGVGG 322 (333)
T ss_dssp TTCSCTTCEEEEEEEET
T ss_pred cCCCCCCCEEEEEEEch
Confidence 443 37888887643
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=81.31 E-value=4.6 Score=38.38 Aligned_cols=81 Identities=11% Similarity=0.102 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee----ecccCccHHHHHHHHHHHHHc
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT----VTMACISSNQGITTGIGLIAA 149 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~----v~~~Casg~~al~~A~~~I~s 149 (472)
...++++++|+++|++++|||.++.-.. .......+...+|++......+ =+..++++...|..+ ++.
T Consensus 211 ~~~~~i~~al~~agl~~~did~~~~H~~-----~~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~~~ 282 (309)
T 2ebd_A 211 SMEEVCREVLEKAGVKPEEVSLVIPHQA-----NVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---IKE 282 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEECCS-----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---HHc
Confidence 4567889999999999999998766321 1223445778899862111111 145566666666655 444
Q ss_pred CC---CCEEEEEeecc
Q psy1213 150 GA---YDVVVAGGVEF 162 (472)
Q Consensus 150 G~---~d~vLv~G~e~ 162 (472)
|+ -|.+|+.++..
T Consensus 283 g~~~~G~~~l~~~~G~ 298 (309)
T 2ebd_A 283 GKVKRGDLILMTAMGG 298 (309)
T ss_dssp TCCCTTCEEEEEEEET
T ss_pred CCCCCCCEEEEEEEch
Confidence 43 37888887643
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=81.22 E-value=3.7 Score=39.85 Aligned_cols=85 Identities=9% Similarity=-0.058 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee-ee----cccCccHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH-TV----TMACISSNQGITTGIGLI 147 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~v----~~~Casg~~al~~A~~~I 147 (472)
+...++++++|+++|++++|||.++.-.. .......+...+|++...... ++ ++.+++...+|..+.+.=
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H~~-----~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~~~~g 305 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPHQA-----NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRSG 305 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECCS-----CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHHHHcC
Confidence 45567889999999999999998766321 223445678889996330222 11 344555555555443321
Q ss_pred HcCCCCEEEEEeecc
Q psy1213 148 AAGAYDVVVAGGVEF 162 (472)
Q Consensus 148 ~sG~~d~vLv~G~e~ 162 (472)
+-..-|.+|+.++..
T Consensus 306 ~~~~G~~vll~~~G~ 320 (339)
T 1mzj_A 306 AVPGGGPALMIGFGA 320 (339)
T ss_dssp SSCTTCEEEEEEEET
T ss_pred CCCCCCEEEEEEEch
Confidence 112347888888754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 472 | ||||
| d1m3ka1 | 268 | c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea | 3e-57 | |
| d1ulqa1 | 273 | c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T | 3e-51 | |
| d1afwa1 | 269 | c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch | 1e-34 | |
| d1wdkc1 | 262 | c.95.1.1 (C:2-263) Fatty oxidation complex beta su | 3e-33 | |
| d1m3ka2 | 124 | c.95.1.1 (A:269-392) Biosynthetic thiolase {Zooglo | 2e-32 | |
| d1ulqa2 | 125 | c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase | 3e-30 | |
| d1wdkc2 | 128 | c.95.1.1 (C:264-391) Fatty oxidation complex beta | 5e-28 | |
| d1afwa2 | 124 | c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Sacc | 5e-28 | |
| d1bi5a1 | 235 | c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med | 2e-04 |
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 188 bits (478), Expect = 3e-57
Identities = 85/284 (29%), Positives = 139/284 (48%), Gaps = 24/284 (8%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
+IV RT +AN AHEL + +L++ G++ ++ ++ G V+ +
Sbjct: 3 PSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE 62
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N R+AA+ AG + A + S + + G+ IA G ++VAGG+E MS
Sbjct: 63 GQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 167 PIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
P H +R K ++ D I + + G MG +A+ +A
Sbjct: 123 P--HCAHLR------GGVKMGDFKM-------IDTMIK--DGLTDAFYGYHMGTTAENVA 165
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYL-----TDILPIQVGDKTISKDNGVR-VSTP 280
+++SR EQD +A+ S A+ AQ+ G I+ + GD T+ D +R +T
Sbjct: 166 KQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATL 225
Query: 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLG 324
+ MAKL+PAF G+VTA N+S L DGA+A ++M+EA+A + G
Sbjct: 226 DSMAKLRPAF-DKEGTVTAGNASGLNDGAAAALLMSEAEASRRG 268
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 172 bits (437), Expect = 3e-51
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 19/284 (6%)
Query: 49 IVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQE-VKT 107
V+ VRTP G A++ +L H+L ++ ++G+ K+ ++ + G Q
Sbjct: 2 AWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDN 61
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
N+ R A L AGF + TV C S + + I AG V + GVE MS P
Sbjct: 62 RNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAP 121
Query: 168 IRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAA 227
+ R P L + T F+ P + E+MG +A+ LA
Sbjct: 122 YAVPKPER---------GFPTGNLVMYDTTLGWRFVN--PKMQALYGTESMGETAENLAE 170
Query: 228 AFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPI-----QVGDKTISKDNGVR-VSTPE 281
+ + R+EQD +AL SH A +A E+G D + + + +D G R ++ E
Sbjct: 171 MYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLE 230
Query: 282 QMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGL 325
++A L+P F + G+VTA NSS L DGA+A +++++ AK GL
Sbjct: 231 KLAALRPVF-REGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 128 bits (322), Expect = 1e-34
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 32/293 (10%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQK----TGISKDL 92
+ S+ +K +++V V R+ + ++ L + L + + +L
Sbjct: 1 KNSLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNL 60
Query: 93 IDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAY 152
I+ + G V+ + R A L++G TP + C S + I G
Sbjct: 61 IEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQI 120
Query: 153 DVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEF 212
D+ +A GVE M++ N + IP
Sbjct: 121 DIGLALGVESMTNNYKNV-----------NPLGMISSEELQKNREAKKCLIP-------- 161
Query: 213 SSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYL-TDILPIQVGDKTI-S 270
MG + + +AA FK+SRK+QDE+A S+ A +A+ +G +ILPI++ D +I
Sbjct: 162 -----MGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQ 216
Query: 271 KDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQ 322
D G R T E ++ ++PAF+K G+ TA N+S ++DG + ++ + A Q
Sbjct: 217 SDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 124 bits (311), Expect = 3e-33
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 39/287 (13%)
Query: 47 KNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQE 104
+++V VD RTP S G + N A +++ H + +L++ + + ++ +++G V Q
Sbjct: 5 RDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQT 64
Query: 105 VKTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
++ NI R A+L + A TV+ C SS + T I G DV V GGVE M
Sbjct: 65 LEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 124
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
+ + H + + + MG +A+
Sbjct: 125 GHVSMMHGVDPN---------------------PHMSLYAAK--------ASGMMGLTAE 155
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYL------TDILPIQVGDKTISKDNGVRV 277
L +SR++QD +A+RSH LA +A +G K D +R
Sbjct: 156 MLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRP 215
Query: 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQL 323
+T E +A LKPAF G+VTA SS +TDGAS ++M+ +AK L
Sbjct: 216 DTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDL 262
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 118 bits (296), Expect = 2e-32
Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 325 LKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANL 384
++P + + V DPK + GP A+ + LERAG + D+D E +EAFA Q A
Sbjct: 1 IQPLGRIVSWATVGVDPKV-MGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVN 59
Query: 385 KAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDG 444
K + D + N GG+++IGHP A+G R+ + R
Sbjct: 60 KDLGW-----------------DPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGA 102
Query: 445 QFGLIAACAAGGQGVGMIIER 465
+ GL C GG GV M IE
Sbjct: 103 RKGLATLCIGGGMGVAMCIES 123
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 112 bits (280), Expect = 3e-30
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 326 KPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLK 385
+P A +R P+ + +GP AT + LERAGLS SD+ E++EAFA Q LA L+
Sbjct: 1 RPLARVRAIAVAGVPPRI-MGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLR 59
Query: 386 AMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQ 445
+ + N GG++++GHP A+G R+ + + R Q
Sbjct: 60 EWSLSM---------------EDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQ 104
Query: 446 FGLIAACAAGGQGVGMIIER 465
FGL C GQG+ +++E
Sbjct: 105 FGLATMCIGVGQGIAVVVEG 124
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 128 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 105 bits (264), Expect = 5e-28
Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
Query: 324 GLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILAN 383
GL+P A +R DP + GP AT + L+RAGL+++DID E++EAFA Q L
Sbjct: 1 GLEPLAVIRSMAVAGVDPAI-MGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPV 59
Query: 384 LKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRED 443
LK + K N GG++++GHPF +G R++ N + +
Sbjct: 60 LKDLKVLDK--------------MNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNG 105
Query: 444 GQFGLIAACAAGGQGVGMIIER 465
G FGL C GQG+ + ER
Sbjct: 106 GTFGLSTMCIGLGQGIATVFER 127
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (264), Expect = 5e-28
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 323 LGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILA 382
L L DF V P+ + +GPAYA P+VLE GL + DID +E++EAFA Q L
Sbjct: 1 LNLPVLGRYIDFQTVGVPPEI-MGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALY 59
Query: 383 NLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE 442
+ + DLNK N GG++++GHP TG R L +
Sbjct: 60 CIHKLG-----------------IDLNKVNPRGGAIALGHPLGCTGARQVATILREL--K 100
Query: 443 DGQFGLIAACAAGGQGVGMIIER 465
Q G+++ C G G I +
Sbjct: 101 KDQIGVVSMCIGTGMGAAAIFIK 123
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Score = 40.6 bits (94), Expect = 2e-04
Identities = 16/141 (11%), Positives = 38/141 (26%)
Query: 24 SLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGIL 83
+ +C + + ++ K V P L + D + L + + + +
Sbjct: 55 KFQRMCDKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAI 114
Query: 84 QKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTG 143
++ G K I +++ T + L C + +
Sbjct: 115 KEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLA 174
Query: 144 IGLIAAGAYDVVVAGGVEFMS 164
L V+ E +
Sbjct: 175 KDLAENNKGARVLVVCSEVTA 195
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 472 | |||
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 100.0 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 100.0 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 100.0 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.96 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.96 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.96 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.95 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.86 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.8 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.79 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.77 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.77 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.68 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.62 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.62 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.55 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.5 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.48 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.46 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.45 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.35 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.33 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.32 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.31 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.26 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 99.25 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 99.24 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 99.14 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.98 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.96 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.96 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 97.52 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 97.34 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 96.79 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 96.55 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 95.89 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 94.08 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 92.77 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 92.24 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 91.73 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 91.64 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 91.25 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 90.62 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 90.33 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 90.27 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 88.73 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 86.69 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 82.64 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 80.91 |
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.3e-42 Score=334.25 Aligned_cols=266 Identities=32% Similarity=0.469 Sum_probs=223.0
Q ss_pred ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCC-CCChHHHHHHHHcCCCCCCce
Q psy1213 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEV-KTSNIGREAALSAGFSDKTPA 126 (472)
Q Consensus 48 ~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~-~~~~~a~~ia~~lGl~~~~~~ 126 (472)
|+|||++.||||++.++.+.+.++.||+..+++++|+++|+++++||.|++|++.+.. .+.++++.++...|+|..+|+
T Consensus 1 ~a~Iv~~~RTPfgk~~G~l~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~ 80 (273)
T d1ulqa1 1 EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAG 80 (273)
T ss_dssp CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEE
T ss_pred CEEEEccccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccce
Confidence 6899999999999998899999999999999999999999999999999999988754 357899999999999988999
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCc
Q psy1213 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL 206 (472)
Q Consensus 127 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (472)
++|++.|+||+.||.+|++.|++|.+|++|++|+|+||+.|+...+..+ ....+. ....+......+ ..
T Consensus 81 ~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p~~~~~~~~--------~~~~g~-~~~~~~~~~~~~--~~ 149 (273)
T d1ulqa1 81 CTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPER--------GFPTGN-LVMYDTTLGWRF--VN 149 (273)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCS--------SSCCSC-EEEEETTSSCCS--CC
T ss_pred EEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchhhhccccccc--------cccCCC-cccccccccccc--cc
Confidence 9999999999999999999999999999999999999999986532110 000010 001111111111 12
Q ss_pred ccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCcccee--cc--ceeeccCCCcc-CCH
Q psy1213 207 PAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQV--GD--KTISKDNGVRV-STP 280 (472)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~--~~--~~~~~de~~~~-~t~ 280 (472)
+...++.....|++.+++++++||+|||++++|++++|++|..|+++|+|+ ++.|..+ .+ ..++.|+.+|+ +|+
T Consensus 150 ~~~~~~~~~~~m~~~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~g~f~~eivp~~~~~~~~~~~v~~d~~~r~~tt~ 229 (273)
T d1ulqa1 150 PKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSL 229 (273)
T ss_dssp HHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCH
T ss_pred hhhhccccccchHHHHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHcCCcceeeeeeccccccCceEEeCCCCcCCCCCH
Confidence 333344555789999999999999999999999999999999999999997 4777655 22 25678999987 899
Q ss_pred HHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCC
Q psy1213 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGL 325 (472)
Q Consensus 281 ~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~ 325 (472)
|.|.+++|+| +++|.+|..|||+++|||||+||+|++.|+++|+
T Consensus 230 e~La~L~p~f-~~~G~vTagnss~~sDGAAa~vl~se~~a~~lGL 273 (273)
T d1ulqa1 230 EKLAALRPVF-REGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273 (273)
T ss_dssp HHHHHSCBSS-STTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTC
T ss_pred HHHccCCCCc-CCCCcEEchhhchHHHHHHHHHHccHHHHHHcCC
Confidence 9999999999 5789999999999999999999999999999984
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=100.00 E-value=2.5e-42 Score=332.27 Aligned_cols=261 Identities=32% Similarity=0.471 Sum_probs=222.8
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
..+||||++.||||+++++.+.+.++.+|+..+++++|+++|++|++||.|++|++.+...+++++++++...|+|..+|
T Consensus 2 ~~~V~Iv~~~RTP~g~~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vp 81 (268)
T d1m3ka1 2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT 81 (268)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred CCCEEEEeceeCcccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCccccc
Confidence 35899999999999999888999999999999999999999999999999999999887778899999999999998899
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++|++.|+||+.+|.+|++.|++|++|++|++|+|+||+.|+...... ....+. ....+.+.
T Consensus 82 a~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~~~~---------~~~~~~-~~~~~~~~------- 144 (268)
T d1m3ka1 82 AWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRG---------GVKMGD-FKMIDTMI------- 144 (268)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCSS---------CCSSSC-EEEEEHHH-------
T ss_pred ceeecccCcccchHHHHHHHHHhCCCceEEeeccccccccCchhhhccc---------CCcCCC-cccccccc-------
Confidence 9999999999999999999999999999999999999999987643111 000000 00000000
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec----cceeeccCCCcc-CC
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG----DKTISKDNGVRV-ST 279 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~----~~~~~~de~~~~-~t 279 (472)
.+.+.++.....|+..+++++++||+||++|++|++++|++|..|+++|+|+ ++.|.... ...++.|+.+|+ ++
T Consensus 145 ~~~l~d~~~~~~Mg~~Ae~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~~~g~~~v~~d~~~r~~tt 224 (268)
T d1m3ka1 145 KDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGAT 224 (268)
T ss_dssp HHHTBCTTTCSBHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCC
T ss_pred cccCcCcccCCcHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhhccccccCCCCCCeEEeCCCCCCCCCC
Confidence 1122344445779999999999999999999999999999999999999998 47786552 135788999987 89
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcC
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLG 324 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g 324 (472)
+|.|.+++|+|. ++|.+|.+|||+++|||||+||+|++.|+++|
T Consensus 225 ~e~L~~L~p~f~-~~GtvTagnss~~~DGAAa~ll~se~~a~~~G 268 (268)
T d1m3ka1 225 LDSMAKLRPAFD-KEGTVTAGNASGLNDGAAAALLMSEAEASRRG 268 (268)
T ss_dssp HHHHHTCCBSSC-TTCCCBSSSBCCCEEEEEEEEEEEHHHHHHHT
T ss_pred HHHHcCCCCCcC-CCCcEEChhhChHHHHHHHHHHhhHHHHHhcC
Confidence 999999999994 57999999999999999999999999999986
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-42 Score=334.20 Aligned_cols=260 Identities=26% Similarity=0.360 Sum_probs=221.8
Q ss_pred cccccccCCceEEEecccccccc-cCccCCCCCHHHHHHHHHHHHHHH----cCCCcCccCEEEEEeecCCCCCChHHHH
Q psy1213 39 KSVKDKTGKNIVFVDGVRTPFLL-SGTDYANMMAHELARHSLIGILQK----TGISKDLIDYIVYGTVIQEVKTSNIGRE 113 (472)
Q Consensus 39 ~~~~~~~~~~~~Ivg~~~t~~~~-~~~~~~~~~~~~La~~A~~~Al~~----agi~~~~Id~vi~g~~~~~~~~~~~a~~ 113 (472)
|..++++++|+|||++.||||++ +++.+.+.++.+|+..+++++|++ ++++|++||.|++|++.+...+.+++++
T Consensus 2 ~~~~~~~~~dvvIv~a~RTP~gr~~~G~l~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~ 81 (269)
T d1afwa1 2 NSLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRA 81 (269)
T ss_dssp TTTTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHH
T ss_pred chhhhCCCCCEEEEcceeCcceeCCCCCCCCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchh
Confidence 67889999999999999999997 577899999999999999999985 4699999999999998877667789999
Q ss_pred HHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhh
Q psy1213 114 AALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKL 193 (472)
Q Consensus 114 ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (472)
++...|+|..+|+++|++.|+||+.||..|++.|++|.+|++|++|+|+||+.|....... ..... .
T Consensus 82 ~al~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~p~~~~~~~----------~~~~~--~- 148 (269)
T d1afwa1 82 ACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLG----------MISSE--E- 148 (269)
T ss_dssp HHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTC----------SCCCH--H-
T ss_pred hhhhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccccccccccccccc----------ccccc--h-
Confidence 9999999989999999999999999999999999999999999999999998765432100 00000 0
Q ss_pred hhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCcccee-ccceeec
Q psy1213 194 LATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQV-GDKTISK 271 (472)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~-~~~~~~~ 271 (472)
... ..........|++.+++++++||+||+++++|++.+|++|..|+++|+|+ +++|+.. .+..++.
T Consensus 149 ~~~-----------~~~~~~~~~~Mg~tAe~~a~~~~isRee~D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~~~~~~~ 217 (269)
T d1afwa1 149 LQK-----------NREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQS 217 (269)
T ss_dssp HHH-----------CTTGGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECS
T ss_pred hcc-----------cccccccccccccccccchhhcCccHHHHhhHHHHHHHHHHHHHhcCCcceEecceecccccEEec
Confidence 000 00112223579999999999999999999999999999999999999997 5889877 4567889
Q ss_pred cCCCcc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHH
Q psy1213 272 DNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQ 322 (472)
Q Consensus 272 de~~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~ 322 (472)
||.+|+ +|+|.|.+++|+|.++.|.+|.+|||+++|||||+||+|+++|++
T Consensus 218 De~~R~~tt~E~La~L~P~f~~~~G~vTagnsS~~sDGAAavll~se~~A~e 269 (269)
T d1afwa1 218 DEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269 (269)
T ss_dssp CSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHH
T ss_pred CCCcCCCCCHHHHcCCCCccCCCCCeEcchhcChHHHHHHHHHHhhHHHhcC
Confidence 999997 899999999999976779999999999999999999999999986
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=5.1e-41 Score=321.85 Aligned_cols=251 Identities=33% Similarity=0.482 Sum_probs=217.0
Q ss_pred ccCCceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHH-cCCCcCccCEEEEEeecCCC-CCChHHHHHHHHcCC
Q psy1213 44 KTGKNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQEV-KTSNIGREAALSAGF 120 (472)
Q Consensus 44 ~~~~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~-agi~~~~Id~vi~g~~~~~~-~~~~~a~~ia~~lGl 120 (472)
.++++||||++.||||++. ++.+.+.++.||+..+++++|++ +|+++++||.|++|++.+.. .++++++.++...|+
T Consensus 2 ~n~r~v~Iv~a~RTP~g~~~gg~~~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~ 81 (262)
T d1wdkc1 2 LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI 81 (262)
T ss_dssp CCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS
T ss_pred CCCCcEEEEeeeeCceeCCCCccccCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhc
Confidence 3567999999999999985 44677899999999999999996 89999999999999988753 467999999999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
|..+|+++|++.|+||+.+|..|++.|++|.+|++|++|+|+||+.|+...... ..
T Consensus 82 p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p~~~~~~~-----------~~------------- 137 (262)
T d1wdkc1 82 PHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDP-----------NP------------- 137 (262)
T ss_dssp CTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCC-----------CG-------------
T ss_pred ccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeecccccccccccccccc-----------cc-------------
Confidence 989999999999999999999999999999999999999999999886432100 00
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-c----ceeeccCC
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-D----KTISKDNG 274 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~----~~~~~de~ 274 (472)
....++......|++.+++++++||++|+++++|+..+|++|.+|+++|+|+ ++.|+... + ..++.||.
T Consensus 138 -----~~~~~~~~~~~~mg~tae~~a~~~gisRe~~D~~a~~S~~ra~~A~~~G~f~~ei~pv~~~~~~~~~~~~~~De~ 212 (262)
T d1wdkc1 138 -----HMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDET 212 (262)
T ss_dssp -----GGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTT
T ss_pred -----cccccccccccchhhhHHHHHHHhccccccchhhhhhhhhhhhhHhhcCCcceeeeeeccccccccccccccccC
Confidence 0111122233569999999999999999999999999999999999999997 58998762 1 34678999
Q ss_pred Ccc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHc
Q psy1213 275 VRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQL 323 (472)
Q Consensus 275 ~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~ 323 (472)
+|+ +|+|.|.+++|+|..++|.+|.+|||+++|||+|+||+|++.|+++
T Consensus 213 ~R~~tt~E~La~LkP~f~~~~GtvTagnsS~isDGAAavll~se~~akeL 262 (262)
T d1wdkc1 213 IRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDL 262 (262)
T ss_dssp CCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHT
T ss_pred CCCCCCHHHHcCCCCcccCCCCcCcchhhChHHHHHHHHHHhCHHHHhcC
Confidence 997 9999999999999655799999999999999999999999999985
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.96 E-value=2.2e-29 Score=209.34 Aligned_cols=124 Identities=36% Similarity=0.536 Sum_probs=118.8
Q ss_pred CCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCC
Q psy1213 325 LKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVG 404 (472)
Q Consensus 325 ~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G 404 (472)
++|+++|++++..+.+|.. ++.+|..|++++|+++|++.+|||+||+||+|+.+.+...++|+
T Consensus 1 L~Plari~~~a~~g~dP~~-mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~~~l~---------------- 63 (124)
T d1m3ka2 1 IQPLGRIVSWATVGVDPKV-MGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLG---------------- 63 (124)
T ss_dssp CCCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHC----------------
T ss_pred CCcEEEEEEEEEEecChHH-hccchHHHHHHHHHHcCCChhcccHHHhcccchhheeeehHhhC----------------
Confidence 3689999999999999975 88999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 405 VPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 405 ~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+|++++|++||.+++|||+||||++.+++++++|+++.+++|+++.|++||+|++++||+.
T Consensus 64 -id~~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~~~~~~~Glas~C~gGG~g~A~liE~v 124 (124)
T d1m3ka2 64 -WDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 124 (124)
T ss_dssp -CCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTCSEEEEEEEETTTEEEEEEEECC
T ss_pred -CChhhcCCCCCccccccCcCccchhHHHHHHHHHHhcCCCEEEEEecccccceeEEEEEeC
Confidence 6888999999999999999999999999999999999999999999999999999999984
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2.4e-29 Score=209.36 Aligned_cols=124 Identities=38% Similarity=0.646 Sum_probs=117.5
Q ss_pred cCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCcc
Q psy1213 323 LGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSK 402 (472)
Q Consensus 323 ~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~ 402 (472)
+|++|+++|++|+..+.+|.. +..+|..|++++|+++|++++|||+||+||+|+.+.+..+++|+
T Consensus 1 Lgl~plAri~~~a~~g~~P~~-m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~~~l~-------------- 65 (124)
T d1afwa2 1 LNLPVLGRYIDFQTVGVPPEI-MGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLG-------------- 65 (124)
T ss_dssp TTCCCCEEEEEEEEEECCGGG-GGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHT--------------
T ss_pred CCCcEEEEEEEEEEEecCHHH-hhhChHHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHHHHcC--------------
Confidence 478899999999999999876 88899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 403 VGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 403 ~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+|++++|++||.+++|||+||||++++++++++|++ +++|+++.|++||+|.+++|||.
T Consensus 66 ---id~~kvN~~GGaiAlGHP~GaSGarlv~~l~~~L~~--~~~glas~C~ggG~G~a~~ier~ 124 (124)
T d1afwa2 66 ---IDLNKVNPRGGAIALGHPLGCTGARQVATILRELKK--DQIGVVSMCIGTGMGAAAIFIKE 124 (124)
T ss_dssp ---CCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCT--TCEEEEEEEETTTEEEEEEEEEC
T ss_pred ---CChhhccccCccceecCCcCCchHHHHHHHHHHhcc--CCEEEEEEcccCCcEEEEEEEeC
Confidence 688899999999999999999999999999999985 48999999999999999999984
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.96 E-value=4.2e-29 Score=207.87 Aligned_cols=125 Identities=36% Similarity=0.608 Sum_probs=117.1
Q ss_pred CCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCC
Q psy1213 326 KPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGV 405 (472)
Q Consensus 326 ~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~ 405 (472)
+|+++|++|+..+.+|.. +..+|..|++++|+++|++++|||+||+||+|+.+.+..+++++++
T Consensus 1 KPlA~i~~~~~~g~~P~~-~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~~~~~~~l~--------------- 64 (125)
T d1ulqa2 1 RPLARVRAIAVAGVPPRI-MGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLS--------------- 64 (125)
T ss_dssp CCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCC---------------
T ss_pred CCeEEEEEEEEEecCHHH-HhhccHHHHHhHhhccCcCccccchheeccccchhHHHHHHHhhcc---------------
Confidence 588999999999999976 8889999999999999999999999999999999999998886521
Q ss_pred CCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 406 PDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 406 ~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+|++++|++||.+++|||+||||++++++++++|+.+.+++|+++.|++||+|.|++|||.
T Consensus 65 ~d~~kvN~~GGaIAlGHP~GASGari~~tl~~~L~~~~~~~G~as~C~gGG~g~A~~iE~i 125 (125)
T d1ulqa2 65 MEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVVEGM 125 (125)
T ss_dssp TTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CchhhcCCCCCcccccCCccccchhHHHHHHHHHHhcCCCEEEEEecccccceeEEEEEeC
Confidence 5778999999999999999999999999999999999999999999999999999999984
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.95 E-value=5.9e-29 Score=208.14 Aligned_cols=128 Identities=38% Similarity=0.617 Sum_probs=118.3
Q ss_pred CCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccC
Q psy1213 324 GLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403 (472)
Q Consensus 324 g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~ 403 (472)
|++|+++|++++..+.+|.. ++.+|..|++++|+++|++++|||+||+||+|+.+.+..+++++...
T Consensus 1 Gl~pla~i~~~~~~g~dP~~-mg~~p~~A~~klL~ragl~~~did~~EinEAFA~q~l~~~~~~~~~~------------ 67 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGVDPAI-MGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLD------------ 67 (128)
T ss_dssp TCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGG------------
T ss_pred CCCEEEEEEEEEEEecCHHH-hccCcHHHHHHHhhhcCccccccceEEeecccchhhhhhhhhccccc------------
Confidence 56899999999999999975 88999999999999999999999999999999999999888887311
Q ss_pred CCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 404 G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++.+++|++||.+++|||+||||++++++++++|+.+.+++|+++.|++||+|+|++|||+
T Consensus 68 --~~~ekvN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~~~~~Glas~C~gGG~g~A~~iErv 128 (128)
T d1wdkc2 68 --KMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIATVFERV 128 (128)
T ss_dssp --GHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEECC
T ss_pred --CCcceecCCCCcccccccccccchhHHHHHHHHHHhcCCCEEEEEecccccceeEEEEEeC
Confidence 3456899999999999999999999999999999999999999999999999999999985
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.86 E-value=1.4e-22 Score=203.56 Aligned_cols=142 Identities=13% Similarity=0.072 Sum_probs=112.7
Q ss_pred cccceeeeeecccCCCCcccccccccCCceE-----------EEecccccccccCccCC---------------------
Q psy1213 20 ITNMSLKSICTSHNVYSPRKSVKDKTGKNIV-----------FVDGVRTPFLLSGTDYA--------------------- 67 (472)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-----------Ivg~~~t~~~~~~~~~~--------------------- 67 (472)
.+...|.|+|+|+|++.++|+.+.....+.+ |. -+|++..|+....
T Consensus 9 ~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~--~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~ 86 (372)
T d1teda_ 9 TTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVY--QKSRITTRRMAVDPLDAKFDVFRREPATIRDRMH 86 (372)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHH--HTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHH
T ss_pred CceEEEEEEEEeCCCeEEcHHHHHHHHHhhcCChHHHHHHHHHH--HccCCcccceeccccccchhhhhhcCCCHHHHHH
Confidence 3556699999999999999976553321110 11 1467776543221
Q ss_pred --CCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec-ccCccHHHHHHHHH
Q psy1213 68 --NMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT-MACISSNQGITTGI 144 (472)
Q Consensus 68 --~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~Casg~~al~~A~ 144 (472)
+++..+|+.+|+++||+++|++++|||.||+++++ ++..|.++..++..||+++.+..++++ .+|+|++.||..|.
T Consensus 87 ~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~ 165 (372)
T d1teda_ 87 LFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATST-GFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTAT 165 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESS-CCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccC-CCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHH
Confidence 13466899999999999999999999999999865 566789999999999997556667775 58999999999999
Q ss_pred HHHHcCCCCEEEEEeecccC
Q psy1213 145 GLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 145 ~~I~sG~~d~vLv~G~e~~s 164 (472)
.+|++|.++.+||+++|..+
T Consensus 166 ~~l~sg~~~~~LVV~~E~~s 185 (372)
T d1teda_ 166 NYVRAHPAMKALVVCIELCS 185 (372)
T ss_dssp HHHHHSTTCEEEEEEEEECG
T ss_pred HHHhcCCCccceeeeehhhc
Confidence 99999999999999999764
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=2.6e-20 Score=166.81 Aligned_cols=139 Identities=16% Similarity=0.145 Sum_probs=125.7
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
.+|.|+|+|+|++.++|+++.+... +.||.. +|++.+|+...++++..+|+.+|+++||+++++++++||.|++++
T Consensus 3 a~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~--~~Gi~~r~~~~~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s 80 (174)
T d1hnja1 3 TKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVT--RTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVAT 80 (174)
T ss_dssp EEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHH--HHCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred cEEEEEEEECCCCcccHHHHHHHhCCCHHHHHh--ccCcceeeecCCCccchHHHHHHHHHhhhhcccccccccEEEEec
Confidence 3689999999999999988887764 556654 688887765556889999999999999999999999999999999
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
.++++..|..+..++..||++ +..+++++.+|+++.+||+.|..+|++|.++.+||+++|..|
T Consensus 81 ~~~~~~~P~~a~~v~~~Lgl~-~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S 143 (174)
T d1hnja1 81 TSATHAFPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLA 143 (174)
T ss_dssp SCCSCSSSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHH
T ss_pred CCccccccchhhhhhhccCCC-chhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhh
Confidence 999988899999999999997 799999999999999999999999999999999999999865
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.79 E-value=6e-20 Score=165.42 Aligned_cols=148 Identities=15% Similarity=0.125 Sum_probs=129.7
Q ss_pred cccCcccccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcC
Q psy1213 14 LNVPQTITNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKD 91 (472)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~ 91 (472)
+-||+. ...+|.|+|+|+|++.++|+++.+... +.||.. +|++.+|+...++++..+|+.+|+++||++++++++
T Consensus 2 ~~~~~~-~~arI~g~g~ylP~~~v~n~e~~~~~~~~~~~i~~--~tGi~~R~~~~~~e~~~~ma~~Aa~~aL~~a~~~~~ 78 (181)
T d1mzja1 2 LRVPER-RFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIET--RTGIRSRRIAEPDETIQVMGVAASRRALEHAGVDPA 78 (181)
T ss_dssp CCCCCC-CEEEEEEEEEECCSCEEEHHHHTTTSSCCHHHHHH--HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGG
T ss_pred CCCCCC-CccEEEEEEEECCCceecHHHHHHHcCCCHHHHHh--ccCcceehhhccCCcHHHHhHHHHHhhhhhccCChh
Confidence 446662 335799999999999999988876653 455544 688887765567899999999999999999999999
Q ss_pred ccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 92 LIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 92 ~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
+||.||+++.+++...+..+..++..+|.+ ++.+++++.+|+|+++||..|..+|++|.++.+||+++|..|.
T Consensus 79 dId~li~~s~~~~~~~p~~a~~v~~~l~~~-~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s~ 151 (181)
T d1mzja1 79 EIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTD 151 (181)
T ss_dssp GCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGG
T ss_pred HCeEEEEeccCCccccccHHHHHHHhhcCC-CccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeeccccc
Confidence 999999999999988899999999999986 7899999999999999999999999999999999999998753
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.77 E-value=1.5e-19 Score=161.49 Aligned_cols=138 Identities=14% Similarity=0.098 Sum_probs=124.8
Q ss_pred eeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEee
Q psy1213 24 SLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTV 101 (472)
Q Consensus 24 ~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~ 101 (472)
+|.++++|+|++.++|+++.+... +.+|.. +|++.+|....++++..+|+.+|+++||+++|++++|||.||+++.
T Consensus 2 gI~~ig~ylP~~~v~n~~~~~~~~~~~~~i~~--~~Gi~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~ 79 (172)
T d1ub7a1 2 GILALGAYVPERVMTNADFEAYLDTSDEWIVT--RTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATN 79 (172)
T ss_dssp EEEEEEEECCSEEEEHHHHHTTSSCCHHHHHH--HTCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECS
T ss_pred ceeEEEEECCCceEcHHHHHHHhCCCHHHHHh--ccCceeeeeccccccccHHHHHHHHHHHhhcCcccccceEEEEecc
Confidence 589999999999999988887764 446654 7888877666678999999999999999999999999999999999
Q ss_pred cCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 102 IQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 102 ~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
++++..|..+..++..||. ++.+++++.+|++++++|..|..++++|.++.+||+++|..|.
T Consensus 80 t~~~~~p~~a~~v~~~Lg~--~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~ 141 (172)
T d1ub7a1 80 TPDALFPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSK 141 (172)
T ss_dssp SCSEEESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred cccccccchHHHHHHHhcc--CccceeehhccccHHHHHHHHhhhhhcCCcceeEEeccccccc
Confidence 9988889999999999996 6899999999999999999999999999999999999998764
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.68 E-value=1.4e-16 Score=144.53 Aligned_cols=147 Identities=18% Similarity=0.117 Sum_probs=115.7
Q ss_pred cCcceeeeeecCHHHHHHcCC-CCcEEEEEeEEeccCCc-ccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HH
Q psy1213 305 LTDGASACVIMTEAKAKQLGL-KPKAYLRDFVYVSQDPK-DQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-IL 381 (472)
Q Consensus 305 ~~DGAAAvvL~s~e~A~~~g~-~~~a~I~g~~~~~~~p~-~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~ 381 (472)
++||++++||++.+.|++++. ++++.|.|++...+... .....+..+++++||++++++++|||++|.|.+.+.. +.
T Consensus 18 ~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~~~~~g~~~~i~~aL~~a~i~~~di~~v~ahgtGt~~~D~ 97 (194)
T d1tqyb2 18 PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDA 97 (194)
T ss_dssp BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHH
T ss_pred eEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccccchhhhhhhhhhhcccccccccceeeeeccccCcccccH
Confidence 899999999999999999997 58999999998765221 1123456889999999999999999999999999974 66
Q ss_pred HHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc-------------------
Q psy1213 382 ANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE------------------- 442 (472)
Q Consensus 382 ~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~------------------- 442 (472)
++++++... |.+ ..+| |.. -+..+||+.+|+|+.+++.++++|+.+
T Consensus 98 ~E~~al~~~-f~~---------~~~~---v~s--~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~~~~~~~~ 162 (194)
T d1tqyb2 98 AEARAIGRV-FGR---------EGVP---VTV--PKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDL 162 (194)
T ss_dssp HHHHHHHHH-HCT---------TCSE---EEC--GGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEE
T ss_pred HHhhhhhhh-hhc---------cccc---ccc--ccccccccccccccceehhhhhhhhhceeccccCCCCCCcccCccc
Confidence 666666421 211 0123 332 234589999999999999999999865
Q ss_pred --------cCCcchhhhhccCcceeEEEEEeC
Q psy1213 443 --------DGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 443 --------~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
..++.++++++.||.++++||+++
T Consensus 163 v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~~ 194 (194)
T d1tqyb2 163 VLGEPRSTAPRTALVLARGRWGFNSAAVLRRF 194 (194)
T ss_dssp CBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCCCccCCCCEEEEECcCCCceeEEEEEeeC
Confidence 125788889999999999999984
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.62 E-value=7.2e-17 Score=143.02 Aligned_cols=138 Identities=10% Similarity=0.044 Sum_probs=120.2
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
++|.++++|+|++.++++++.+... ..+|.. +|++.+|+..-++++..+|+.+|++++|++. ++++||.+++++
T Consensus 2 VgI~~~~~ylP~~~v~~~e~~~~~g~~~~~i~~--~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~~--~~~~id~li~~t 77 (166)
T d1xpma1 2 IGIDKINFYVPKYYVDMAKLAEARQVDPNKFLI--GIGQTEMAVSPVNQDIVSMGANAAKDIITDE--DKKKIGMVIVAT 77 (166)
T ss_dssp EEEEEEEEECCSEEEEHHHHHHHTTSCHHHHHT--TTCCSEEEECCTTCCHHHHHHHHHHTTCCHH--HHHHEEEEEEEC
T ss_pred eeEeEEEEECCCeEEcHHHHHHHhCCCHHHHHH--hcCcEEEEeCCCccCHHHHHHHHHHhhhccc--cCCCCCeEEEec
Confidence 5799999999999999988876654 334433 5777776655568999999999999999775 478999999999
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
.+++...+..+..++..+|++....+++++.+|+++.++|..|..++++|..+.+||+++|..+
T Consensus 78 ~~~~~~~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~ 141 (166)
T d1xpma1 78 ESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTAR 141 (166)
T ss_dssp SSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEEC
T ss_pred cccccccchhHHHHHHhhccccceEEeeecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEe
Confidence 9998888999999999999976789999999999999999999999999999999999999754
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.62 E-value=8.1e-16 Score=140.77 Aligned_cols=151 Identities=16% Similarity=0.093 Sum_probs=117.0
Q ss_pred cCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-
Q psy1213 305 LTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ- 379 (472)
Q Consensus 305 ~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~- 379 (472)
++||++++||++.+.|++++.+++++|.|++...+.... ........+++.+|++++++++|||+||.|.+.+..
T Consensus 19 ~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~~~i~~ie~hgtGt~~~ 98 (205)
T d1tqya2 19 LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQN 98 (205)
T ss_dssp EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHH
T ss_pred eEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCccceeeeeccccccccC
Confidence 899999999999999999999999999999887652211 112234688999999999999999999999999964
Q ss_pred HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc-----------------
Q psy1213 380 ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE----------------- 442 (472)
Q Consensus 380 ~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~----------------- 442 (472)
+.++++++... |..... .+| |. .-+..+||..+|+|+.+++.++++|+.+
T Consensus 99 D~~E~~ai~~~-~~~~~~-------~~~---v~--s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~p~~~~ 165 (205)
T d1tqya2 99 DRHETAAYKRA-LGEHAR-------RTP---VS--SIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDL 165 (205)
T ss_dssp HHHHHHHHHHH-TGGGGG-------GSC---EE--CTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCS
T ss_pred chhHHHHHHHh-hccccC-------Cce---ee--eecccccccccccchhHHHHHHHHHhCCeEcccCCCCCCCCCCCc
Confidence 66666666421 332211 133 33 2234489999999999999999999865
Q ss_pred ----------cCCcchhhhhccCcceeEEEEEeCCC
Q psy1213 443 ----------DGQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 443 ----------~g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
..++.++++++.||.++++||+..|.
T Consensus 166 ~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~~~~ 201 (205)
T d1tqya2 166 DYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAET 201 (205)
T ss_dssp CCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHHH
T ss_pred ccCCCCCcCCCCCEEEEeCCCCCceeEEEEEeeCCC
Confidence 12578888889999999999997653
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.55 E-value=8e-16 Score=140.25 Aligned_cols=138 Identities=13% Similarity=0.039 Sum_probs=108.8
Q ss_pred eeeeecccCCCCcccccccccC-----Cce------EEEecccccccccCccCCC-----------------CCHHHHHH
Q psy1213 25 LKSICTSHNVYSPRKSVKDKTG-----KNI------VFVDGVRTPFLLSGTDYAN-----------------MMAHELAR 76 (472)
Q Consensus 25 ~~~~~~~~p~~~~~~~~~~~~~-----~~~------~Ivg~~~t~~~~~~~~~~~-----------------~~~~~La~ 76 (472)
|..+++|+|++.++|+++.+.. .+. .|.. +|++.+|....++ ++..+|+.
T Consensus 3 i~~~a~~~P~~~v~n~e~~e~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~e~~~~~~~~~~~~~~~~~~a~~la~ 80 (200)
T d1u0ma1 3 LCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIE--NTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRVP 80 (200)
T ss_dssp ECCCEEECCSEEEEHHHHHHHHHHHHTTCTTHHHHHHHHH--HTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred eccceEECCCeeEcHHHHHHHHHHhCCCchhHHHHHHHHH--hCCCCeeeEECChhhhccCCCHHHHHHHHHHHHHHHHH
Confidence 5667888888887775543211 010 1222 5777766543332 24678999
Q ss_pred HHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-cccCccHHHHHHHHHHHHHcCCCCEE
Q psy1213 77 HSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-TMACISSNQGITTGIGLIAAGAYDVV 155 (472)
Q Consensus 77 ~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~Casg~~al~~A~~~I~sG~~d~v 155 (472)
+|+++||+++|+++++||.||+++.++. ..|..+..++..+|++.....+++ +.+|+++.++|..|..+|++|..+.+
T Consensus 81 ~Aa~~aL~~ag~~~~dId~lI~~s~t~~-~~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~v 159 (200)
T d1u0ma1 81 AVIQRALDDAELLATDIDVIIYVSCTGF-MMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANA 159 (200)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEEECSSSC-CSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEE
T ss_pred HHHHHHHHHcCCChhhhheEEEeccCCC-CcchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEE
Confidence 9999999999999999999999887754 468899999999999767888998 57999999999999999999999999
Q ss_pred EEEeecccCC
Q psy1213 156 VAGGVEFMSD 165 (472)
Q Consensus 156 Lv~G~e~~s~ 165 (472)
||+++|.+|.
T Consensus 160 Lvv~~e~~S~ 169 (200)
T d1u0ma1 160 LIVACEFCSL 169 (200)
T ss_dssp EEEEEEEGGG
T ss_pred EEEEEecccc
Confidence 9999998764
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.50 E-value=9.3e-15 Score=136.29 Aligned_cols=140 Identities=10% Similarity=0.016 Sum_probs=105.8
Q ss_pred ceeeeeecccCCCCcccccccccCC--------------ceEEEecccccccccCccCCC--------------------
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--------------NIVFVDGVRTPFLLSGTDYAN-------------------- 68 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--------------~~~Ivg~~~t~~~~~~~~~~~-------------------- 68 (472)
..|.|+|+|+|++.++|+++..... ..+|.. ++++.+|....++
T Consensus 17 a~I~giGt~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~--~~GI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (235)
T d1bi5a1 17 ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCD--KSMIKRRYMYLTEEILKENPNVCEYMAPSLDAR 94 (235)
T ss_dssp CEEEEEEEECCSCEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHH--HSCCCEEECSCCHHHHHTCHHHHSSSCSCHHHH
T ss_pred cEEEEEEEECCCcEEeHHHHHHHHHHhhccccchhhhhhhhhhhc--ccCCceeEEecChHhhccCcccccccCccHHHH
Confidence 4599999999999999877643210 011211 4555544322221
Q ss_pred -----CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee-ecccCccHHHHHHH
Q psy1213 69 -----MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT-VTMACISSNQGITT 142 (472)
Q Consensus 69 -----~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~-v~~~Casg~~al~~ 142 (472)
++..+|+.+|+++||+++|+++++||.||+++.++... +.+...+...+++..+...+. ++.+|++++++|..
T Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~-p~~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~ 173 (235)
T d1bi5a1 95 QDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRL 173 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCS-SCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCcc-CccHHHHHHHHhcCCCceEEeeecCccchHHHHHHH
Confidence 24568999999999999999999999999999988764 445556666666644566665 47899999999999
Q ss_pred HHHHHHcCCCCEEEEEeecccCC
Q psy1213 143 GIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 143 A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
|..+|++|..+.|||+++|..|.
T Consensus 174 A~~~i~~~~~~~vLvV~~E~~S~ 196 (235)
T d1bi5a1 174 AKDLAENNKGARVLVVCSEVTAV 196 (235)
T ss_dssp HHHHHHTSTTCEEEEEEEECGGG
T ss_pred HHHHHHcCCCCeEEEEEeeecce
Confidence 99999999999999999998764
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.48 E-value=4e-14 Score=133.33 Aligned_cols=93 Identities=25% Similarity=0.348 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
....+++.++++||+|+|+++++++ +|++|+..+.. ....++.+++..+|
T Consensus 70 ~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~g 149 (249)
T d1j3na1 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcC
Confidence 4567899999999999999987765 78888755431 01235678999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
+ .+|+++++++|+|++.||.+|+++|++|++|++||+|+|...
T Consensus 150 l--~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~ 192 (249)
T d1j3na1 150 F--TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAI 192 (249)
T ss_dssp C--CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred C--CCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhh
Confidence 9 699999999999999999999999999999999999998743
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=4e-13 Score=126.33 Aligned_cols=91 Identities=21% Similarity=0.251 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lGl 120 (472)
...|++.++++||+++|++.++.+ ++++|+..... ....++..++..+|+
T Consensus 72 ~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 151 (250)
T d2gfva1 72 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCC
Confidence 567899999999999999877665 57777654321 012356789999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeeccc
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~ 163 (472)
.+|+++|+++|+|++.||.+|+++|++|++|++||+|+|..
T Consensus 152 --~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~ 192 (250)
T d2gfva1 152 --RGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKA 192 (250)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred --CCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhh
Confidence 69999999999999999999999999999999999999864
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.35 E-value=7.5e-12 Score=117.17 Aligned_cols=91 Identities=18% Similarity=0.264 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lGl 120 (472)
...++.+++.+||+++|++++.+. .+++|+..... .....+..++..+|+
T Consensus 72 ~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (250)
T d1e5ma1 72 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC
Confidence 456899999999999999876654 57777644321 012346778899999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeeccc
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~ 163 (472)
.+|+++++++|+|++.||..|+++|++|++|.+||+|+|..
T Consensus 152 --~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~ 192 (250)
T d1e5ma1 152 --KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAA 192 (250)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred --CCCCccccccchhhhhhhHHHhhcccCCcccccccccchhh
Confidence 69999999999999999999999999999999999999963
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.33 E-value=1.3e-12 Score=114.45 Aligned_cols=128 Identities=13% Similarity=0.112 Sum_probs=95.6
Q ss_pred CCcEEEEEeEEeccCCcc----cccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCC
Q psy1213 326 KPKAYLRDFVYVSQDPKD----QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRS 400 (472)
Q Consensus 326 ~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~ 400 (472)
++|++|+|++...+.... +...+..+++++||++||++++|||++|.|.+.|.. +..++.++... |.++...
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~v-f~~~~~~-- 77 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQA-LGNHAYN-- 77 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HGGGGGG--
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhc-cccCCCc--
Confidence 478999999998763211 123345789999999999999999999999999963 55566555421 4332211
Q ss_pred ccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc---------------------------cCCcchhhhhc
Q psy1213 401 SKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE---------------------------DGQFGLIAACA 453 (472)
Q Consensus 401 ~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~---------------------------~g~~gl~~~~~ 453 (472)
++ |+.. +..+||+.+|+|+.+++.++++|+.+ ..++.++++++
T Consensus 78 -----~~---v~s~--K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfG 147 (161)
T d1e5ma2 78 -----IA---VSST--KSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFG 147 (161)
T ss_dssp -----SE---EECT--HHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEE
T ss_pred -----ce---EEec--ccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcC
Confidence 23 4332 33489999999999999999999865 12577888999
Q ss_pred cCcceeEEEEEeC
Q psy1213 454 AGGQGVGMIIERH 466 (472)
Q Consensus 454 ~GG~~~a~~l~~~ 466 (472)
.||.++++||++.
T Consensus 148 fGG~Na~lvl~~y 160 (161)
T d1e5ma2 148 FGGHNVTLAFKKY 160 (161)
T ss_dssp TTTEEEEEEEECC
T ss_pred cCcEeEEEEEeee
Confidence 9999999999975
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.32 E-value=1.4e-12 Score=113.71 Aligned_cols=126 Identities=13% Similarity=0.091 Sum_probs=95.1
Q ss_pred CCcEEEEEeEEeccCCcc----cccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCC
Q psy1213 326 KPKAYLRDFVYVSQDPKD----QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRS 400 (472)
Q Consensus 326 ~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~ 400 (472)
.+|++|+|++...+.... ....+..+++++||+++|++|+|||++|.|.+.+.. +..++.++... |.+
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~-fg~------ 73 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAV-LGK------ 73 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHH-HCS------
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHh-cCC------
Confidence 368999999998763211 113344689999999999999999999999999964 66666666421 211
Q ss_pred ccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc---------------------------cCCcchhhhhc
Q psy1213 401 SKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE---------------------------DGQFGLIAACA 453 (472)
Q Consensus 401 ~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~---------------------------~g~~gl~~~~~ 453 (472)
++| |. --+..+||+.+|+|+.+++.++++|+.+ ..++.++++++
T Consensus 74 ----~~~---v~--s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfG 144 (158)
T d1ox0a2 74 ----EVP---VS--STKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFG 144 (158)
T ss_dssp ----SSE---EE--CTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEE
T ss_pred ----ccc---Cc--CcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcC
Confidence 134 43 2233489999999999999999999865 12578888999
Q ss_pred cCcceeEEEEEeCC
Q psy1213 454 AGGQGVGMIIERHP 467 (472)
Q Consensus 454 ~GG~~~a~~l~~~~ 467 (472)
+||.++++||++.+
T Consensus 145 fGG~Na~lvl~~~~ 158 (158)
T d1ox0a2 145 FGGHNAVLAFKRWE 158 (158)
T ss_dssp TTTEEEEEEEECCC
T ss_pred CCcEeEEEEEEecC
Confidence 99999999999864
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.31 E-value=1.9e-12 Score=113.11 Aligned_cols=128 Identities=19% Similarity=0.177 Sum_probs=96.4
Q ss_pred CCcEEEEEeEEeccCCcc----cccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCC
Q psy1213 326 KPKAYLRDFVYVSQDPKD----QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRS 400 (472)
Q Consensus 326 ~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~ 400 (472)
++|++|.|++...+.... ....+...+++++|+++|++|+|||++|.|.+.+.. +.++++++... |+....
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~-f~~~~~--- 76 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRV-FGDHAK--- 76 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HHHHHT---
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHH-HHhcCC---
Confidence 478999999998653111 113345788999999999999999999999999974 66676666532 544321
Q ss_pred ccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc--------------------------cCCcchhhhhcc
Q psy1213 401 SKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE--------------------------DGQFGLIAACAA 454 (472)
Q Consensus 401 ~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~--------------------------~g~~gl~~~~~~ 454 (472)
+ +.++.-+..+||..+|+|+..++.++.+|+.+ ..++.++++++.
T Consensus 77 ------~---~~i~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGf 147 (159)
T d1j3na2 77 ------R---LMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAF 147 (159)
T ss_dssp ------T---CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECT
T ss_pred ------C---ceEecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCC
Confidence 1 22222334489999999999999999999865 125788889999
Q ss_pred CcceeEEEEEeC
Q psy1213 455 GGQGVGMIIERH 466 (472)
Q Consensus 455 GG~~~a~~l~~~ 466 (472)
||.++++||||+
T Consensus 148 gG~Na~~vl~kv 159 (159)
T d1j3na2 148 GGHNAVLAFKRV 159 (159)
T ss_dssp TSEEEEEEEECC
T ss_pred CceeEEEEEEEC
Confidence 999999999985
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.26 E-value=4.5e-12 Score=110.94 Aligned_cols=128 Identities=20% Similarity=0.158 Sum_probs=94.0
Q ss_pred CCcEEEEEeEEeccCCcc--c--ccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCC
Q psy1213 326 KPKAYLRDFVYVSQDPKD--Q--LLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRS 400 (472)
Q Consensus 326 ~~~a~I~g~~~~~~~p~~--~--~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~ 400 (472)
++|++|+|++...+.... + ...+...+++++|+++|++|+||||+|.|.+.|.. +..++.++... |++.-
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~-f~~~~---- 75 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTI-FGEAA---- 75 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HGGGG----
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHH-hcccc----
Confidence 478999999997653111 1 12344789999999999999999999999999963 55566555421 43321
Q ss_pred ccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc----------------------------cCCcchhhhh
Q psy1213 401 SKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE----------------------------DGQFGLIAAC 452 (472)
Q Consensus 401 ~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~----------------------------~g~~gl~~~~ 452 (472)
+. +-++--+..+||..+|+|+.+++.++++|+.+ ..++++++++
T Consensus 76 ------~~--~~i~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsf 147 (161)
T d2gfva2 76 ------SR--VLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSF 147 (161)
T ss_dssp ------TT--SEEECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEE
T ss_pred ------cc--ceeccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCc
Confidence 11 22222233489999999999999999999864 1256788899
Q ss_pred ccCcceeEEEEEeC
Q psy1213 453 AAGGQGVGMIIERH 466 (472)
Q Consensus 453 ~~GG~~~a~~l~~~ 466 (472)
+.||.++++|||+.
T Consensus 148 GfgG~Na~lil~~~ 161 (161)
T d2gfva2 148 GFGGTNGSLIFKKI 161 (161)
T ss_dssp EGGGEEEEEEEECC
T ss_pred CccceeEEEEEEEC
Confidence 99999999999974
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=1.5e-11 Score=115.32 Aligned_cols=93 Identities=22% Similarity=0.221 Sum_probs=74.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC-----EEEEEeecCCC---------------------------CCChHHHHHHHH
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID-----YIVYGTVIQEV---------------------------KTSNIGREAALS 117 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id-----~vi~g~~~~~~---------------------------~~~~~a~~ia~~ 117 (472)
....+...+..+|+.++++..+..+ ++++|+..+.. ....++..++..
T Consensus 70 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (253)
T d2vbaa1 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred hhhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccc
Confidence 3456888999999999998754321 56666544321 012356789999
Q ss_pred cCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 118 AGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 118 lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
+|+ .+|+++++++|+|++.||.+|+++|++|++|++||+|+|.+.
T Consensus 150 ~g~--~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~ 194 (253)
T d2vbaa1 150 FKI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELC 194 (253)
T ss_dssp TTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred cCc--ccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhh
Confidence 999 699999999999999999999999999999999999999753
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=99.24 E-value=6.7e-12 Score=109.80 Aligned_cols=128 Identities=14% Similarity=0.127 Sum_probs=93.8
Q ss_pred cEEEEEeEEeccCCcc--c--ccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCcc
Q psy1213 328 KAYLRDFVYVSQDPKD--Q--LLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSK 402 (472)
Q Consensus 328 ~a~I~g~~~~~~~p~~--~--~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~ 402 (472)
|++|.|++...+.... + ...+...+++++|++++++++||||+|.|.+.+.. +.++++++... |..+...
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~-~~~~~~~---- 75 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTV-FSEHATS---- 75 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HTHHHHT----
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhh-hcccccc----
Confidence 6899999997753211 1 12233578999999999999999999999999974 66677666522 4332211
Q ss_pred CCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc----------------------------cCCcchhhhhcc
Q psy1213 403 VGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE----------------------------DGQFGLIAACAA 454 (472)
Q Consensus 403 ~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~----------------------------~g~~gl~~~~~~ 454 (472)
-+ +.++--+..+||+.+|+|+.+++.++++|+.+ ..+++++++++.
T Consensus 76 ---~~---~~i~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGf 149 (161)
T d2ix4a2 76 ---GT---LAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGF 149 (161)
T ss_dssp ---SC---SEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEET
T ss_pred ---cc---eeeeccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcc
Confidence 12 22222334489999999999999999999875 125788889999
Q ss_pred CcceeEEEEEeC
Q psy1213 455 GGQGVGMIIERH 466 (472)
Q Consensus 455 GG~~~a~~l~~~ 466 (472)
||.++++||+.+
T Consensus 150 gG~Na~lvl~~~ 161 (161)
T d2ix4a2 150 GGTNASLLFASI 161 (161)
T ss_dssp TTEEEEEEEECC
T ss_pred cceeEEEEEEeC
Confidence 999999999864
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=99.14 E-value=4.3e-10 Score=105.83 Aligned_cols=91 Identities=22% Similarity=0.257 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCc-----cCEEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 71 AHELARHSLIGILQKTGISKDL-----IDYIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~-----Id~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
..+.+..+..+|+.+++....+ ...+......... ....++.+++..+|
T Consensus 88 ~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 167 (270)
T d2ix4a1 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (270)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHhC
Confidence 4566778889999998865432 1233333322210 01235778999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeeccc
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~ 163 (472)
+ .+|+++|+++|+|++.||++|+++|++|++|++||+|+|..
T Consensus 168 l--~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~ 209 (270)
T d2ix4a1 168 F--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESS 209 (270)
T ss_dssp C--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred C--CCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhh
Confidence 9 69999999999999999999999999999999999999875
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.98 E-value=1.1e-09 Score=99.22 Aligned_cols=90 Identities=16% Similarity=0.160 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lGl 120 (472)
...|++.++.+||+++|+++++++ .+++|+..+.. ....++.+++..+|+
T Consensus 70 ~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 149 (208)
T d1tqyb1 70 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM 149 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccc
Confidence 467899999999999999988775 57787654321 012346789999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeeccc
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~ 163 (472)
++|+++++++|+|++.||..|+++|++| +|++||+|+|.+
T Consensus 150 --~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~ 189 (208)
T d1tqyb1 150 --RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSA 189 (208)
T ss_dssp --CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECC
T ss_pred --cceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccc
Confidence 6999999999999999999999999999 999999999973
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.96 E-value=4.7e-10 Score=96.62 Aligned_cols=121 Identities=15% Similarity=0.160 Sum_probs=87.7
Q ss_pred cEEEEEeEEeccCCc--ccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCC
Q psy1213 328 KAYLRDFVYVSQDPK--DQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVG 404 (472)
Q Consensus 328 ~a~I~g~~~~~~~p~--~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G 404 (472)
|++|+|++...+... .+...+..++++++|+.+ +.|||++|.|.+.+. .+.+++.++... |.+ .
T Consensus 1 Yaei~G~g~~~Dg~~~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~v-fg~---------~ 67 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREV-FGD---------K 67 (151)
T ss_dssp CEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHH-HTT---------C
T ss_pred CEEEEEEEEecCCCCCCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHH-hCC---------C
Confidence 689999999876322 112345578889999776 579999999999996 366666666421 311 0
Q ss_pred CCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc---------------------------cCCcchhhhhccCcc
Q psy1213 405 VPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE---------------------------DGQFGLIAACAAGGQ 457 (472)
Q Consensus 405 ~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~---------------------------~g~~gl~~~~~~GG~ 457 (472)
.++ |+. -+..+||+.+|+|+.+++.++++|+.+ ..++.++++++.||.
T Consensus 68 ~~~---v~s--~K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~ 142 (151)
T d2vbaa2 68 SPA---ISA--TKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGT 142 (151)
T ss_dssp CCE---EEC--THHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTE
T ss_pred Ccc---ccc--chhhccccccchhhhhhhHHHHHHHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccce
Confidence 012 432 233489999999999999999999864 115777889999999
Q ss_pred eeEEEEEeC
Q psy1213 458 GVGMIIERH 466 (472)
Q Consensus 458 ~~a~~l~~~ 466 (472)
++++||||+
T Consensus 143 Na~~vl~~v 151 (151)
T d2vbaa2 143 NATLVMRKL 151 (151)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEEC
Confidence 999999985
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.96 E-value=1.4e-09 Score=99.05 Aligned_cols=92 Identities=22% Similarity=0.346 Sum_probs=75.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------------CCChHHHH
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------------KTSNIGRE 113 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------------~~~~~a~~ 113 (472)
....|++.|+++||+|+|+++++++ .+++++..... ....++..
T Consensus 70 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 149 (216)
T d1tqya1 70 RASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAE 149 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHH
T ss_pred cchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHH
Confidence 4667999999999999999987655 45555444321 01124678
Q ss_pred HHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeeccc
Q psy1213 114 AALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163 (472)
Q Consensus 114 ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~ 163 (472)
++..+|+ .+|.++++++|+|++.||.+|+++|++|++|++||+|+|..
T Consensus 150 ia~~~g~--~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~ 197 (216)
T d1tqya1 150 VAWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP 197 (216)
T ss_dssp HHHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred HHHhcCc--cccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence 9999999 69999999999999999999999999999999999999974
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.52 E-value=7.5e-05 Score=62.95 Aligned_cols=96 Identities=14% Similarity=0.120 Sum_probs=70.8
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~ 429 (472)
.++++++|+++|++++|||++-.|...........+.|| +|++++..+ -+--+||...|+=.
T Consensus 51 ~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lg-----------------l~~ek~~~~-~~~~~GNt~sasip 112 (148)
T d1u6ea2 51 GDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQ-----------------LRPDAVVAN-DIEHTGNTSAASIP 112 (148)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHT-----------------CCTTCEECC-THHHHCBCGGGHHH
T ss_pred HHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcC-----------------CCchhhhhh-hHHhhCCCccchHH
Confidence 468899999999999999999999999988777788888 676655443 12236898888888
Q ss_pred HHHHHHHHHHhhccCCcchhhhhccCcce-eEEEEE
Q psy1213 430 RLTVHAANRLVREDGQFGLIAACAAGGQG-VGMIIE 464 (472)
Q Consensus 430 ~~v~e~v~qL~~~~g~~gl~~~~~~GG~~-~a~~l~ 464 (472)
..+.+++.+=+-+.|++.+..+++ +|.. .++||+
T Consensus 113 ~~L~~a~~~g~i~~Gd~vll~gfG-~G~s~~a~llr 147 (148)
T d1u6ea2 113 LAMAELLTTGAAKPGDLALLIGYG-AGLSYAAQVVR 147 (148)
T ss_dssp HHHHHHHHHTSSCTTCEEEEEEEE-TTTEEEEEEEE
T ss_pred HHHHHHHHcCCCCCCCEEEEEEEc-hhhhheEEEEe
Confidence 888887776444566777765444 5554 455554
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=97.34 E-value=0.00016 Score=60.90 Aligned_cols=95 Identities=19% Similarity=0.152 Sum_probs=69.0
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~ 429 (472)
..+++.+|+++|++++|||+|-+|...........+.|+ +|++++..+ .--+||..+|+=.
T Consensus 50 p~~i~~~L~~~g~~~~dId~~i~Hqa~~~~~~~i~~~lg-----------------i~~~k~~~~--~~~~Gn~~sasip 110 (149)
T d1ub7a2 50 NTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLG-----------------LPWERVAVN--VDRYGNTSTASIP 110 (149)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTT-----------------CCGGGBCCC--HHHHCBCGGGHHH
T ss_pred HHHHHHHHHhhccccccccEEEeeccchHHHHHHHhhcc-----------------chhhHHHHH--HHHhcCCcchhHH
Confidence 467899999999999999999999999887777788888 455555433 2237888888877
Q ss_pred HHHHHHHHHHhhccCCcchhhhhccCcce-eEEEEE
Q psy1213 430 RLTVHAANRLVREDGQFGLIAACAAGGQG-VGMIIE 464 (472)
Q Consensus 430 ~~v~e~v~qL~~~~g~~gl~~~~~~GG~~-~a~~l~ 464 (472)
..+.+++++-+-+.|++.|..+.+ .|.. .++||+
T Consensus 111 ~~L~~~~~~~~~~~Gd~vll~g~G-~G~s~ga~llr 145 (149)
T d1ub7a2 111 LALKEAVDAGRIREGDHVLLVSFG-AGLTWAAAVLT 145 (149)
T ss_dssp HHHHHHHHHTSSCTTCEEEEEEEE-TTTEEEEEEEE
T ss_pred HHHHHHHHcCCCCCCCEEEEEEEc-hHhhhEEEEEE
Confidence 777777666544567777775555 4444 445554
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=96.79 E-value=0.0011 Score=55.13 Aligned_cols=94 Identities=21% Similarity=0.111 Sum_probs=66.7
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~ 429 (472)
..+++++|+++|++++|||++=.|.......-...+.|| +|.+++..+ .--+||...|+=.
T Consensus 47 ~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~-----------------l~~~k~~~~--~~~~GN~~sasip 107 (143)
T d1hnja2 47 AHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLG-----------------MSMDNVVVT--LDRHGNTSAASVP 107 (143)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTT-----------------CCGGGBCCC--HHHHCBCGGGHHH
T ss_pred hHHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCc-----------------cchhhhhhh--hhhhcccccchHH
Confidence 467899999999999999999999998877666778888 455544432 2347998888877
Q ss_pred HHHHHHHHHHhhccCCcchhhhhccCcce-eEEEE
Q psy1213 430 RLTVHAANRLVREDGQFGLIAACAAGGQG-VGMII 463 (472)
Q Consensus 430 ~~v~e~v~qL~~~~g~~gl~~~~~~GG~~-~a~~l 463 (472)
..+.+++.+=+-+.|++.+..+.+ .|.. .++||
T Consensus 108 ~~L~~~~~~~~~~~Gd~vll~g~G-~G~s~g~~ll 141 (143)
T d1hnja2 108 CALDEAVRDGRIKPGQLVLLEAFG-GGFTWGSALV 141 (143)
T ss_dssp HHHHHHHHTTCSCTTCEEEEEEEE-TTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCCCEEEEEEEe-hhhhhEEEEE
Confidence 777776665443566766665444 4454 34444
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=96.55 E-value=0.0028 Score=53.19 Aligned_cols=99 Identities=19% Similarity=0.154 Sum_probs=65.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~ 429 (472)
.++++.+|+++|++++|||+|-+|-......-...+.|| +|.+++-.. -.--+||...||=.
T Consensus 51 p~~i~~~L~~~gl~~~dId~~i~Hq~~~~~~~~v~~~lg-----------------i~~ek~~~~-~~~~~GNt~Sasip 112 (153)
T d1mzja2 51 VPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLG-----------------VPEHVVVSR-DAEDTGNTSSASVA 112 (153)
T ss_dssp HHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHT-----------------CCTTSEECC-THHHHCBCTTHHHH
T ss_pred HHHHHHHHHHhCCCcccCCEEEEcCCcHHHHHHHHHHhC-----------------CCchhcchh-hhhhcCCcccchHH
Confidence 467899999999999999999999999877667778888 676664221 11226777776655
Q ss_pred HHHHHHHHHHhhccCCcchhhhhccCcce-eEEEEEeCCC
Q psy1213 430 RLTVHAANRLVREDGQFGLIAACAAGGQG-VGMIIERHPD 468 (472)
Q Consensus 430 ~~v~e~v~qL~~~~g~~gl~~~~~~GG~~-~a~~l~~~~~ 468 (472)
..+.+++.+-+-+.+++.|..+ -|.|.. .+++| ++|.
T Consensus 113 ~~L~~~~~~~~~~~Gd~ill~~-fG~G~s~~~~~l-~~~~ 150 (153)
T d1mzja2 113 LALDRLVRSGAVPGGGPALMIG-FGAGLSYAGQAL-LLPD 150 (153)
T ss_dssp HHHHHHHHHTSSCTTCEEEEEE-EETTTEEEEEEE-ECCC
T ss_pred HHHHHHHHcCCCCCCCEEEEEE-EchhhhhhEEEE-EecC
Confidence 5555555543334566666643 335654 34555 4433
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=95.89 E-value=0.0016 Score=54.49 Aligned_cols=98 Identities=19% Similarity=0.117 Sum_probs=63.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCC-CCccccCCCCCcH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWG-GSLSIGHPFAATG 428 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~G-G~~a~Ghp~gasG 428 (472)
..+++++|+++|++++|||+|=+|-..........+.|| +|++++..+= -+--+||...||=
T Consensus 46 ~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lg-----------------l~~~k~~~s~~~l~~~GN~~sasi 108 (148)
T d1u0ma2 46 APALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLE-----------------VDPHAFRFSRATLTEYGNIASAVV 108 (148)
T ss_dssp HHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSC-----------------SCGGGGHHHHHHHHHTCBCTTHHH
T ss_pred HHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhC-----------------CChhhhhHHHHHHHhcCCCCcchH
Confidence 577899999999999999999999999887777778898 5655543210 0112578777775
Q ss_pred HHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 429 VRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 429 ~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
...+.+++.+=+-+.|++.|..+.+ .|....++|-+
T Consensus 109 ~~~L~~~~~~~~~~~Gd~ill~gfG-~G~s~~~~llr 144 (148)
T d1u0ma2 109 LDALRRLFDEGGVEEGARGLLAGFG-PGITAEMSLGC 144 (148)
T ss_dssp HHHHHHHHHSCCCCSSCCCEEEEEE-TTTEEEEEEEE
T ss_pred HHHHHHHHHcCCCCCCCEEEEEEEc-hHhEeeEEEEE
Confidence 5444444433112345677665443 56655444433
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.08 E-value=0.12 Score=42.40 Aligned_cols=85 Identities=14% Similarity=0.044 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee-e----cccCccHHHHHHHHHHH
Q psy1213 72 HELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT-V----TMACISSNQGITTGIGL 146 (472)
Q Consensus 72 ~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~-v----~~~Casg~~al~~A~~~ 146 (472)
.....++++++|+++|++++|||.++.-.. ....-..++..+|++......+ + |+.++|-..+|..+.+.
T Consensus 47 ~~~v~~~i~~~L~~~gl~~~dId~~i~Hqa-----~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~~ 121 (148)
T d1u6ea2 47 AFKMGDVGRRAMDAAGVRPDQIDVFVPHQA-----NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTT 121 (148)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEECCS-----CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccccEEEeccc-----cHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHHc
Confidence 344567889999999999999999876321 2345677889999974332322 1 33444455677766654
Q ss_pred HHcCCCCEEEEEeec
Q psy1213 147 IAAGAYDVVVAGGVE 161 (472)
Q Consensus 147 I~sG~~d~vLv~G~e 161 (472)
=+-..-|.++++|+-
T Consensus 122 g~i~~Gd~vll~gfG 136 (148)
T d1u6ea2 122 GAAKPGDLALLIGYG 136 (148)
T ss_dssp TSSCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEc
Confidence 222234788877753
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=92.77 E-value=0.19 Score=41.16 Aligned_cols=85 Identities=14% Similarity=0.077 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee----cccCccHHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV----TMACISSNQGITTGIGLIA 148 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~Casg~~al~~A~~~I~ 148 (472)
...-++++++|+++|++++|||.++.-. .....-..+...+|++...-..++ |++++|-..+|..+.+.=+
T Consensus 47 ~~vp~~i~~~L~~~g~~~~dId~~i~Hq-----a~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~~ 121 (149)
T d1ub7a2 47 RVMNTATLEAIEKAGLTPEDIRLFVPHQ-----ANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAGR 121 (149)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC-----SCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhhccccccccEEEeec-----cchHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcCC
Confidence 3445788999999999999999987632 123456778889999743222222 3334444455555555422
Q ss_pred cCCCCEEEEEeecc
Q psy1213 149 AGAYDVVVAGGVEF 162 (472)
Q Consensus 149 sG~~d~vLv~G~e~ 162 (472)
-..-|.+|++|+-.
T Consensus 122 ~~~Gd~vll~g~G~ 135 (149)
T d1ub7a2 122 IREGDHVLLVSFGA 135 (149)
T ss_dssp SCTTCEEEEEEEET
T ss_pred CCCCCEEEEEEEch
Confidence 23457888888754
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=92.24 E-value=0.062 Score=44.68 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=64.6
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCC-CccccCCCCCcH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGG-SLSIGHPFAATG 428 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG-~~a~Ghp~gasG 428 (472)
...++.+|+++|++.+|||+|=+|-......-...+.|| +|++++..+=- +--+|+...||=
T Consensus 46 ~~~~~~~l~~~~~~~~did~~i~Hqgg~~Ild~v~~~L~-----------------L~~~k~~~s~~~l~~~GN~sSasi 108 (156)
T d1u0ua2 46 ENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLN-----------------LDPTKLIPTRHVMSEYGNMSSACV 108 (156)
T ss_dssp HHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHT-----------------CCTTTTHHHHHHHHHHCBCGGGHH
T ss_pred HHHHHHHHHHcCCChhhCceEeecCCcHHHHHHHHHHhC-----------------CCcccchhhHHHHhhcCCCCcccH
Confidence 467899999999999999999999999876666667888 45554432211 112566666665
Q ss_pred HHHHHHHHHHHhhc-------cCCcchhhhhccCcc-eeEEEEEeCC
Q psy1213 429 VRLTVHAANRLVRE-------DGQFGLIAACAAGGQ-GVGMIIERHP 467 (472)
Q Consensus 429 ~~~v~e~v~qL~~~-------~g~~gl~~~~~~GG~-~~a~~l~~~~ 467 (472)
...+-++..+-..+ .+++++..+++ .|. --++||+++|
T Consensus 109 p~~L~~~~~~~~~~~~~~~~~~~~~~~~~gfG-~Glt~~~~llr~~~ 154 (156)
T d1u0ua2 109 HFILDQTRKASLQNGCSTTGEGLEMGVLFGFG-PGLTIETVVLKSVP 154 (156)
T ss_dssp HHHHHHHHHHHHHHTCSBSBTTBSEEEEEEEE-TTTEEEEEEEEECB
T ss_pred HHHHHHHHHhhhhccCCCcCCCCCEEEEEEEC-HHHhHHHHHHeeCc
Confidence 55555554443321 23455655443 454 4568888876
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=91.73 E-value=0.3 Score=40.88 Aligned_cols=95 Identities=17% Similarity=0.113 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccCcch-----HHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCC
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHEAFA-----GQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHP 423 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd~f~-----~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp 423 (472)
..+|+++||+++|++++|||++=...+.. .......+.|| .+. ..+...
T Consensus 53 a~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg-----------------~~~---------~~~di~ 106 (172)
T d1ub7a1 53 AFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFG-----------------LKA---------FAYDLL 106 (172)
T ss_dssp HHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTT-----------------CCC---------EEEEEE
T ss_pred HHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhc-----------------cCc---------cceeeh
Confidence 46889999999999999999987654433 12222334555 120 234445
Q ss_pred CCCcHHHHHHHHHHHHhhcc-CCcchh----------------hhhccCcceeEEEEEeCCCC
Q psy1213 424 FAATGVRLTVHAANRLVRED-GQFGLI----------------AACAAGGQGVGMIIERHPDA 469 (472)
Q Consensus 424 ~gasG~~~v~e~v~qL~~~~-g~~gl~----------------~~~~~GG~~~a~~l~~~~~~ 469 (472)
.+++|.....+....+.... .++.|+ +....|-.++|+||++.++.
T Consensus 107 ~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~~~~~~d~~~~~lfGDgAaA~ll~~~~~~ 169 (172)
T d1ub7a1 107 AGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIIDWNDRATAVLFGDGGGAAVVGKVREG 169 (172)
T ss_dssp CSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTSCTTCHHHHTTBCCEEEEEEEECCCTT
T ss_pred hccccHHHHHHHHhhhhhcCCcceeEEecccccccccCCCCcCeEEEecceeEEEEEEEcCCC
Confidence 56777776666666655432 344443 12334445678888887753
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=91.64 E-value=0.083 Score=43.77 Aligned_cols=100 Identities=12% Similarity=0.073 Sum_probs=65.0
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCC-CccccCCCCCcH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGG-SLSIGHPFAATG 428 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG-~~a~Ghp~gasG 428 (472)
...++..|+.+|++.+|||+|=+|-......-...+.|| +|++++..+=- +--+|+.-.||=
T Consensus 45 ~~~~~~~l~~~gl~~~di~~~v~Hqgg~~Ild~v~~~L~-----------------L~~~~~~~s~~vl~~yGN~SSasi 107 (154)
T d1bi5a2 45 TKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLA-----------------LKPEKMNATREVLSEYGNMSSACV 107 (154)
T ss_dssp HHHHHHHHGGGTCCCTTSSEEEECCSSHHHHHHHHHHHT-----------------CCGGGGHHHHHHHHHHCBCGGGHH
T ss_pred HHHHHHHHHHcCCCccccceEeeccccHHHHHHHHHHhC-----------------CCHHHHHHhHHHHHhcCCCCcccH
Confidence 467889999999999999999999988876666678888 45554433211 122577777776
Q ss_pred HHHHHHHHHHHhhccC-------CcchhhhhccCcc-eeEEEEEeCC
Q psy1213 429 VRLTVHAANRLVREDG-------QFGLIAACAAGGQ-GVGMIIERHP 467 (472)
Q Consensus 429 ~~~v~e~v~qL~~~~g-------~~gl~~~~~~GG~-~~a~~l~~~~ 467 (472)
...+-++.++-...+. ++++..+++ .|. --++||++.+
T Consensus 108 ~~vL~~~~~~~~~~~~~~~g~~~~~~~~~aFG-~Glt~~~~llr~~~ 153 (154)
T d1bi5a2 108 LFILDEMRKKSTQNGLKTTGEGLEWGVLFGFG-PGLTIETVVLRSVA 153 (154)
T ss_dssp HHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEE-TTTEEEEEEEEECB
T ss_pred HHHHHHHHHhhhccCCcccCCCcCEEEEEEEc-hHHhHHHHHHhcCc
Confidence 6666666555432211 345554433 444 4568888764
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=91.25 E-value=0.35 Score=39.17 Aligned_cols=84 Identities=13% Similarity=0.065 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee----cccCccHHHHHHHHHHHHHc
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV----TMACISSNQGITTGIGLIAA 149 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~Casg~~al~~A~~~I~s 149 (472)
...++++++|+++|++++|||.++.-.. ....-..++..+|++......++ |++++|-..+|..+.+.=+-
T Consensus 45 ~~~~~i~~~L~~~g~~~~dId~~i~Hq~-----~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~~~~~ 119 (143)
T d1hnja2 45 ELAHIVDETLAANNLDRSQLDWLVPHQA-----NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRI 119 (143)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECCS-----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTTCS
T ss_pred hhhHHHHHHHHHhhhcccccceEEeccC-----chHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHHhCCC
Confidence 4567889999999999999999875321 23456778899999743222222 34445555566655543111
Q ss_pred CCCCEEEEEeecc
Q psy1213 150 GAYDVVVAGGVEF 162 (472)
Q Consensus 150 G~~d~vLv~G~e~ 162 (472)
..-|.+|.+|+-.
T Consensus 120 ~~Gd~vll~g~G~ 132 (143)
T d1hnja2 120 KPGQLVLLEAFGG 132 (143)
T ss_dssp CTTCEEEEEEEET
T ss_pred CCCCEEEEEEEeh
Confidence 2338888888754
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=90.62 E-value=0.13 Score=42.73 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=65.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCC-CccccCCCCCcH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGG-SLSIGHPFAATG 428 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG-~~a~Ghp~gasG 428 (472)
...++..|+.+|++.+|||+|=+|-......-...+.|| +|.+++-.+=- +--+|+...+|=
T Consensus 50 ~~~v~~~l~~~gl~~~di~~~v~Hqgg~~Ild~i~~~L~-----------------L~~~~l~~s~~vl~~yGNtSSaSI 112 (160)
T d1ee0a2 50 ENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLN-----------------LKEDKLRASRHVLSEYGNLISACV 112 (160)
T ss_dssp HHHHHHHHGGGTCCCGGGSEEEECCSSHHHHHHHHHHTT-----------------CCTTTTHHHHHHHHHHCBCGGGHH
T ss_pred HHHHHHHHhhccCCccccceEeecCCcHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHHhCCCccchH
Confidence 567889999999999999999999998876666678888 45544422101 112577777777
Q ss_pred HHHHHHHHHHHhhccC-------CcchhhhhccCcce-eEEEEEeCC
Q psy1213 429 VRLTVHAANRLVREDG-------QFGLIAACAAGGQG-VGMIIERHP 467 (472)
Q Consensus 429 ~~~v~e~v~qL~~~~g-------~~gl~~~~~~GG~~-~a~~l~~~~ 467 (472)
...+-++..+-..+++ +++|..+++ .|.. -++||++++
T Consensus 113 ~~vL~~~~~~~~~~~~~~~g~~~d~~ll~afG-~Glt~~~~llr~~~ 158 (160)
T d1ee0a2 113 LFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFG-PGMTVETVVLRSVR 158 (160)
T ss_dssp HHHHHHHHHHHHHTTCSBTBTTBSEEEEEEEE-TTTEEEEEEEEECB
T ss_pred HHHHHHHHhhhhhcCCCCcCCCcCEEEEEEEC-hHHHHHHHHHeecc
Confidence 7666666654433222 345554443 4554 467887753
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=90.33 E-value=0.83 Score=37.23 Aligned_cols=84 Identities=10% Similarity=-0.064 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee--eec-cc-CccH--HHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH--TVT-MA-CISS--NQGITTGIGL 146 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~--~v~-~~-Casg--~~al~~A~~~ 146 (472)
....++++++|+++|++++|||.++.-. .....-..++..+|++... .+ .+. -+ |+|. ..+|..+.+.
T Consensus 48 ~~vp~~i~~~L~~~gl~~~dId~~i~Hq-----~~~~~~~~v~~~lgi~~ek-~~~~~~~~~GNt~Sasip~~L~~~~~~ 121 (153)
T d1mzja2 48 ADVVPAAREALEVAGLTVGDLVAFVPHQ-----ANLRIIDVLVDRLGVPEHV-VVSRDAEDTGNTSSASVALALDRLVRS 121 (153)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCTTS-EECCTHHHHCBCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCCEEEEcC-----CcHHHHHHHHHHhCCCchh-cchhhhhhcCCcccchHHHHHHHHHHc
Confidence 4456788899999999999999987632 1234567788999997432 22 232 12 2222 2444444443
Q ss_pred HHcCCCCEEEEEeecc
Q psy1213 147 IAAGAYDVVVAGGVEF 162 (472)
Q Consensus 147 I~sG~~d~vLv~G~e~ 162 (472)
=+-..-|.+|++|+-.
T Consensus 122 ~~~~~Gd~ill~~fG~ 137 (153)
T d1mzja2 122 GAVPGGGPALMIGFGA 137 (153)
T ss_dssp TSSCTTCEEEEEEEET
T ss_pred CCCCCCCEEEEEEEch
Confidence 1112248888877643
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=90.27 E-value=0.5 Score=39.46 Aligned_cols=40 Identities=15% Similarity=0.082 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccCcc-----hHHHHHHHHhcC
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHEAF-----AGQILANLKAMD 388 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd~f-----~~~~~~~~ealg 388 (472)
..+|+++||+++|++++|||++-+..+. +.......+.||
T Consensus 55 a~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lg 99 (174)
T d1hnja1 55 GFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLG 99 (174)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHT
T ss_pred HHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccC
Confidence 4689999999999999999998764332 233334446666
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=86.69 E-value=0.86 Score=38.20 Aligned_cols=28 Identities=29% Similarity=0.300 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccCcc
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHEAF 376 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd~f 376 (472)
...|+++||+++|++++|||++-...+.
T Consensus 62 a~~Aa~~aL~~a~~~~~dId~li~~s~~ 89 (181)
T d1mzja1 62 GVAASRRALEHAGVDPAEIDLVVVSTMT 89 (181)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSC
T ss_pred hHHHHHhhhhhccCChhHCeEEEEeccC
Confidence 4689999999999999999998765443
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=82.64 E-value=1.5 Score=37.21 Aligned_cols=25 Identities=24% Similarity=0.179 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEcc
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVH 373 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~h 373 (472)
..+|+++||+++|++++|||++=..
T Consensus 79 a~~Aa~~aL~~ag~~~~dId~lI~~ 103 (200)
T d1u0ma1 79 VPAVIQRALDDAELLATDIDVIIYV 103 (200)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred HHHHHHHHHHHcCCChhhhheEEEe
Confidence 3689999999999999999999543
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=80.91 E-value=2 Score=37.45 Aligned_cols=40 Identities=18% Similarity=0.067 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccCcc----hHHHHHHHHhcC
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHEAF----AGQILANLKAMD 388 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd~f----~~~~~~~~ealg 388 (472)
..+|+++||+++|++++|||++=+.-+. +.......+.++
T Consensus 106 a~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~ 149 (235)
T d1bi5a1 106 GKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLG 149 (235)
T ss_dssp HHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHh
Confidence 3688999999999999999999764332 223334445555
|