Psyllid ID: psy12163

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------
Protein Sequence
MDNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQFLQSITCLGGVVKTLAW
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MDNPFFYPWLAASVISSIYSYIWDIkmdwglfdknappdnpflreetvYSSTTSTLIGYVLFNPTGILMIQFLQSITCLGgvvktlaw
Flexible Loop (DISEMBL)
MDNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQFLQSITCLGGVVKTLAW
Low Complexity Region (SEG)
MDNPFFYPWLAASVissiysyiWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQFLQSITCLGGVVKTLAW
Disordered region (IsUnstruct)
****FFYPWLAASVISSIYSYIWDIKMDWGLFDK******************************************************
Disordered Region (DISOPRED)
*DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQFLQSITCLGGVVKTLAW
Disordered Region (DISEMBL)
MDNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQFLQSITCLGGVVKTLAW
Disordered Region (DISPRO)
MDNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQFLQSITCLGGVVKTLAW
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNPTGILMIQFLQSITCLGGVVKTLAW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	88	2.2.26 [Sep-21-2011]
Q9TU72	696	Xenotropic and polytropic	N/A	N/A	0.5	0.063	0.666	3e-11
Q9UBH6	696	Xenotropic and polytropic	yes	N/A	0.5	0.063	0.666	4e-11
Q9R031	691	Xenotropic and polytropic	N/A	N/A	0.5	0.063	0.666	6e-11
Q9R032	696	Xenotropic and polytropic	N/A	N/A	0.5	0.063	0.666	6e-11
Q9QZ71	696	Xenotropic and polytropic	N/A	N/A	0.5	0.063	0.666	6e-11
Q9Z0U0	695	Xenotropic and polytropic	yes	N/A	0.5	0.063	0.666	7e-11
A7XZ53	696	Xenotropic and polytropic	N/A	N/A	0.5	0.063	0.666	7e-11
Q6DD44	692	Xenotropic and polytropic	N/A	N/A	0.5	0.063	0.644	1e-10
Q28CY9	692	Xenotropic and polytropic	yes	N/A	0.5	0.063	0.644	2e-10
Q9QZ70	696	Xenotropic and polytropic	yes	N/A	0.5	0.063	0.644	3e-10

>sp|Q9TU72|XPR1_MUSVI Xenotropic and polytropic retrovirus receptor 1 OS=Mustela vison GN=XPR1 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 5   FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
           FFY W+   +ISS Y+ IWD+KMDWGLFDKNA  +N FLREE VY
Sbjct: 510 FFYLWIVFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553

Potential receptor for xenotropic and polytropic murine leukemia retroviruses.
Mustela vison (taxid: 452646)

>sp|Q9UBH6|XPR1_HUMAN Xenotropic and polytropic retrovirus receptor 1 OS=Homo sapiens GN=XPR1 PE=1 SV=1

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 5   FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
           FFY W+   +ISS Y+ IWD+KMDWGLFDKNA  +N FLREE VY
Sbjct: 510 FFYLWIVFYIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553

May function in G-protein coupled signal transduction (By similarity). Potential receptor for xenotropic and polytropic murine leukemia retroviruses.

Homo sapiens (taxid: 9606)

>sp|Q9R031|XPR1_MUSMC Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus musculus castaneus GN=Xpr1 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 5   FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
           FFY W+   +ISS Y+ IWD+KMDWGLFDKNA  +N FLREE VY
Sbjct: 510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553

May function in G-protein coupled signal transduction.

Mus musculus castaneus (taxid: 10091)

>sp|Q9R032|XPR1_MUSSP Xenotropic and polytropic retrovirus receptor 1 OS=Mus spretus GN=Xpr1 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 5   FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
           FFY W+   +ISS Y+ IWD+KMDWGLFDKNA  +N FLREE VY
Sbjct: 510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553

May function in G-protein coupled signal transduction (By similarity). Potential receptor for xenotropic and polytropic murine leukemia retroviruses.

Mus spretus (taxid: 10096)

>sp|Q9QZ71|XPR1_MUSDU Xenotropic and polytropic retrovirus receptor 1 OS=Mus dunni GN=Xpr1 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 5   FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
           FFY W+   +ISS Y+ IWD+KMDWGLFDKNA  +N FLREE VY
Sbjct: 510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553

May function in G-protein coupled signal transduction (By similarity). Potential receptor for xenotropic and polytropic murine leukemia retroviruses.

Mus dunni (taxid: 254704)

>sp|Q9Z0U0|XPR1_MOUSE Xenotropic and polytropic retrovirus receptor 1 OS=Mus musculus GN=Xpr1 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 5   FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
           FFY W+   +ISS Y+ IWD+KMDWGLFDKNA  +N FLREE VY
Sbjct: 510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553

May function in G-protein coupled signal transduction (By similarity). Potential receptor for xenotropic and polytropic murine leukemia retroviruses.

Mus musculus (taxid: 10090)

>sp|A7XZ53|XPR1_MUSPA Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus pahari GN=Xpr1 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 5   FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
           FFY W+   +ISS Y+ IWD+KMDWGLFDKNA  +N FLREE VY
Sbjct: 510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553

May function in G-protein coupled signal transduction.

Mus pahari (taxid: 10093)

>sp|Q6DD44|XPR1_XENLA Xenotropic and polytropic retrovirus receptor 1 homolog OS=Xenopus laevis GN=xpr1 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)

Query: 5   FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
           FFY W+    ISS Y+ IWD+KMDWGLFD+NA  +N FLREE VY
Sbjct: 506 FFYLWIVFYFISSCYTLIWDLKMDWGLFDRNA-GENTFLREEIVY 549

May function in G-protein coupled signal transduction.

Xenopus laevis (taxid: 8355)

>sp|Q28CY9|XPR1_XENTR Xenotropic and polytropic retrovirus receptor 1 homolog OS=Xenopus tropicalis GN=xpr1 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/45 (64%), Positives = 35/45 (77%), Gaps = 1/45 (2%)

Query: 5   FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
           FFY W+   +ISS Y+ IWD+KMDWGLFD+NA  +N FLREE VY
Sbjct: 506 FFYLWIIFYLISSCYTLIWDLKMDWGLFDRNA-GENTFLREEIVY 549

May function in G-protein coupled signal transduction.

Xenopus tropicalis (taxid: 8364)

>sp|Q9QZ70|XPR1_CRIGR Xenotropic and polytropic retrovirus receptor 1 homolog OS=Cricetulus griseus GN=XPR1 PE=2 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 5   FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVY 49
           F Y W+    ISS Y+ IWD+KMDWGLFDKNA  +N FLREE VY
Sbjct: 510 FLYLWVVFCAISSCYTLIWDLKMDWGLFDKNA-GENTFLREEIVY 553

May function in G-protein coupled signal transduction.

Cricetulus griseus (taxid: 10029)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	88
195396757	675	GJ16834 [Drosophila virilis] gi|19414676	0.795	0.103	0.526	9e-14
194892240	674	GG18146 [Drosophila erecta] gi|190649274	0.795	0.103	0.513	2e-13
195481226	674	GE15556 [Drosophila yakuba] gi|194189090	0.795	0.103	0.513	2e-13
195040196	676	GH12301 [Drosophila grimshawi] gi|193900	0.795	0.103	0.513	2e-13
18859913	674	CG7536, isoform A [Drosophila melanogast	0.795	0.103	0.513	3e-13
195132023	675	GI15930 [Drosophila mojavensis] gi|19390	0.795	0.103	0.526	3e-13
125981653	674	GA20422 [Drosophila pseudoobscura pseudo	0.75	0.097	0.541	4e-13
91079722	662	PREDICTED: similar to xenotropic and pol	0.579	0.077	0.692	4e-13
195448194	675	GK25858 [Drosophila willistoni] gi|19416	0.795	0.103	0.5	5e-13
195555282	601	GD24484 [Drosophila simulans] gi|1942030	0.795	0.116	0.513	6e-13

>gi|195396757|ref|XP_002056995.1| GJ16834 [Drosophila virilis] gi|194146762|gb|EDW62481.1| GJ16834 [Drosophila virilis]

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 6/76 (7%)

Query: 2   DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
           DNP+ + W+ AS++SS YSY WDIKMDWGLFDKNA  +N FLREE VYSST     G+  
Sbjct: 489 DNPYTWLWIVASIVSSCYSYTWDIKMDWGLFDKNA-GENTFLREEVVYSST-----GFYY 542

Query: 62  FNPTGILMIQFLQSIT 77
           F     L ++F+ +++
Sbjct: 543 FAILEDLALRFIWALS 558

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194892240|ref|XP_001977625.1| GG18146 [Drosophila erecta] gi|190649274|gb|EDV46552.1| GG18146 [Drosophila erecta]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 6/76 (7%)

Query: 2   DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
           DNP+ + W+ AS++SS Y+Y WDIKMDWGLFDKNA  +N FLREE VYSST     G+  
Sbjct: 489 DNPYTWLWIIASIVSSCYAYTWDIKMDWGLFDKNA-GENTFLREEVVYSST-----GFYY 542

Query: 62  FNPTGILMIQFLQSIT 77
           F     L ++F+ +++
Sbjct: 543 FAIVEDLALRFIWALS 558

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195481226|ref|XP_002101566.1| GE15556 [Drosophila yakuba] gi|194189090|gb|EDX02674.1| GE15556 [Drosophila yakuba]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 6/76 (7%)

Query: 2   DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
           DNP+ + W+ AS++SS Y+Y WDIKMDWGLFDKNA  +N FLREE VYSST     G+  
Sbjct: 489 DNPYTWLWIIASIVSSCYAYTWDIKMDWGLFDKNA-GENTFLREEVVYSST-----GFYY 542

Query: 62  FNPTGILMIQFLQSIT 77
           F     L ++F+ +++
Sbjct: 543 FAIVEDLALRFIWALS 558

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195040196|ref|XP_001991022.1| GH12301 [Drosophila grimshawi] gi|193900780|gb|EDV99646.1| GH12301 [Drosophila grimshawi]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 6/76 (7%)

Query: 2   DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
           DNP+ + W+ +S++SS YSY WDIKMDWGLFDKNA  +N FLREE VYSST     G+  
Sbjct: 489 DNPYTWLWIVSSIVSSCYSYTWDIKMDWGLFDKNA-GENTFLREEVVYSST-----GFYY 542

Query: 62  FNPTGILMIQFLQSIT 77
           F     L ++F+ +++
Sbjct: 543 FAILEDLALRFIWALS 558

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|18859913|ref|NP_573265.1| CG7536, isoform A [Drosophila melanogaster] gi|24642934|ref|NP_728131.1| CG7536, isoform B [Drosophila melanogaster] gi|15291893|gb|AAK93215.1| LD30826p [Drosophila melanogaster] gi|22832470|gb|AAF48793.2| CG7536, isoform A [Drosophila melanogaster] gi|22832471|gb|AAN09455.1| CG7536, isoform B [Drosophila melanogaster] gi|220947210|gb|ACL86148.1| CG7536-PA [synthetic construct] gi|220956750|gb|ACL90918.1| CG7536-PA [synthetic construct]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 6/76 (7%)

Query: 2   DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
           DNP+ + W+ AS++SS Y+Y WDIKMDWGLFDKNA  +N FLREE VYSST     G+  
Sbjct: 489 DNPYTWLWIIASIVSSCYAYTWDIKMDWGLFDKNA-GENTFLREEVVYSST-----GFYY 542

Query: 62  FNPTGILMIQFLQSIT 77
           F     L ++F+ +++
Sbjct: 543 FAILEDLALRFIWALS 558

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195132023|ref|XP_002010443.1| GI15930 [Drosophila mojavensis] gi|193908893|gb|EDW07760.1| GI15930 [Drosophila mojavensis]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 6/76 (7%)

Query: 2   DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
           DNP+ + W+ AS+ SS YSY WDIKMDWGLFDKNA  +N FLREE VYSST     G+  
Sbjct: 489 DNPYTWLWIVASIASSCYSYTWDIKMDWGLFDKNA-GENTFLREEVVYSST-----GFYY 542

Query: 62  FNPTGILMIQFLQSIT 77
           F     L ++F+ +++
Sbjct: 543 FAILEDLALRFIWALS 558

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125981653|ref|XP_001354830.1| GA20422 [Drosophila pseudoobscura pseudoobscura] gi|54643141|gb|EAL31885.1| GA20422 [Drosophila pseudoobscura pseudoobscura]

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 6/72 (8%)

Query: 2   DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
           DNP+ + W+ AS++SS Y+Y WDIKMDWGLFDKNA  +N FLREE VYSST     G+  
Sbjct: 489 DNPYTWLWIIASIVSSCYAYTWDIKMDWGLFDKNA-GENTFLREEVVYSST-----GFYY 542

Query: 62  FNPTGILMIQFL 73
           F     L ++F+
Sbjct: 543 FAIVEDLALRFI 554

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91079722|ref|XP_969695.1| PREDICTED: similar to xenotropic and polytropic murine leukemia virus receptor xpr1 [Tribolium castaneum] gi|270003331|gb|EEZ99778.1| hypothetical protein TcasGA2_TC002557 [Tribolium castaneum]

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/52 (69%), Positives = 42/52 (80%), Gaps = 1/52 (1%)

Query: 1   MDNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSST 52
           M++PFFY W+ AS+ISS Y+Y WDIK+DWGLFD  A  DN FLREE VYSST
Sbjct: 489 MESPFFYLWITASLISSCYAYTWDIKLDWGLFDSKA-GDNKFLREEIVYSST 539

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195448194|ref|XP_002071551.1| GK25858 [Drosophila willistoni] gi|194167636|gb|EDW82537.1| GK25858 [Drosophila willistoni]

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 6/76 (7%)

Query: 2   DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
           DNP+ + W+ +S++SS Y+Y WDIKMDWGLFDKNA  +N FLREE VYSST     G+  
Sbjct: 489 DNPYTWLWIISSIVSSCYAYTWDIKMDWGLFDKNA-GENTFLREEVVYSST-----GFYY 542

Query: 62  FNPTGILMIQFLQSIT 77
           F     L ++F+ +++
Sbjct: 543 FAIVEDLALRFIWALS 558

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195555282|ref|XP_002077066.1| GD24484 [Drosophila simulans] gi|194203084|gb|EDX16660.1| GD24484 [Drosophila simulans]

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 6/76 (7%)

Query: 2   DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
           DNP+ + W+ AS++SS Y+Y WDIKMDWGLFDKNA  +N FLREE VYSST     G+  
Sbjct: 489 DNPYTWLWIIASIVSSCYAYTWDIKMDWGLFDKNA-GENTFLREEVVYSST-----GFYY 542

Query: 62  FNPTGILMIQFLQSIT 77
           F     L ++F+ +++
Sbjct: 543 FAILEDLALRFIWALS 558

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	88
FB|FBgn0030890	674	CG7536 [Drosophila melanogaste	0.795	0.103	0.460	1.6e-11
FB|FBgn0035649	671	CG10483 [Drosophila melanogast	0.659	0.086	0.525	4.1e-11
UNIPROTKB|F1MHL9	696	XPR1 "Uncharacterized protein"	0.909	0.114	0.386	1.6e-08
UNIPROTKB|F1S680	658	XPR1 "Uncharacterized protein"	0.5	0.066	0.555	3.2e-08
UNIPROTKB|F6PMF3	696	XPR1 "Uncharacterized protein"	0.5	0.063	0.555	3.4e-08
UNIPROTKB|Q9UBH6	696	XPR1 "Xenotropic and polytropi	0.5	0.063	0.555	4.4e-08
RGD|1306554	696	Xpr1 "xenotropic and polytropi	0.5	0.063	0.555	4.4e-08
UNIPROTKB|Q9R031	691	Xpr1 "Xenotropic and polytropi	0.875	0.111	0.395	5.6e-08
UNIPROTKB|E2J876	690	Xpr1 "Xenotropic and polytropi	0.5	0.063	0.555	7.1e-08
MGI|MGI:97932	695	Xpr1 "xenotropic and polytropi	0.5	0.063	0.555	7.2e-08

FB|FBgn0030890 CG7536 [Drosophila melanogaster (taxid:7227)]

 Score = 168 (64.2 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 35/76 (46%), Positives = 47/76 (61%)

Query:     2 DNPFFYPWLAASVXXXXXXXXWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
             DNP+ + W+ AS+        WDIKMDWGLFDKNA  +N FLREE VYSST     G+  
Sbjct:   489 DNPYTWLWIIASIVSSCYAYTWDIKMDWGLFDKNAG-ENTFLREEVVYSST-----GFYY 542

Query:    62 FNPTGILMIQFLQSIT 77
             F     L ++F+ +++
Sbjct:   543 FAILEDLALRFIWALS 558

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0035649 CG10483 [Drosophila melanogaster (taxid:7227)]

 Score = 164 (62.8 bits), Expect = 4.1e-11, P = 4.1e-11
 Identities = 31/59 (52%), Positives = 37/59 (62%)

Query:     2 DNPFFYPWLAASVXXXXXXXXWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYV 60
             +NP+FY W+ A++        WDIKMDWGLFD  A  DN FLREE VYSST     G +
Sbjct:   492 ENPWFYCWITAAIFSSCYAYTWDIKMDWGLFDSKAG-DNRFLREEIVYSSTWFYYFGII 549

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1MHL9 XPR1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 140 (54.3 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 34/88 (38%), Positives = 46/88 (52%)

Query:     5 FFYPWLAASVXXXXXXXXWDIKMDWGLFDKNAPPDNPFLREETVYSSTT---STLIGYVL 61
             FFY W+   +        WD+KMDWGLFDKNA  +N FLREE VY       S +I  V+
Sbjct:   510 FFYLWIVFCIISSCYTLIWDLKMDWGLFDKNAG-ENTFLREEIVYPQKAYYYSAIIEDVI 568

Query:    62 FNPTGILMIQFLQSITCL---GGVVKTL 86
                   + I  + S+T L   G ++ T+
Sbjct:   569 LRFAWTIQIS-ITSMTSLPHSGDIIATV 595

GO:0009615 "response to virus" evidence=IEA

GO:0004872 "receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1S680 XPR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 137 (53.3 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 25/45 (55%), Positives = 29/45 (64%)

Query:     5 FFYPWLAASVXXXXXXXXWDIKMDWGLFDKNAPPDNPFLREETVY 49
             FFY W+   +        WD+KMDWGLFDKNA  +N FLREE VY
Sbjct:   472 FFYLWIVFCIISSCYTLIWDLKMDWGLFDKNAG-ENTFLREEIVY 515

GO:0004872 "receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009615 "response to virus" evidence=IEA

UNIPROTKB|F6PMF3 XPR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 137 (53.3 bits), Expect = 3.4e-08, P = 3.4e-08
 Identities = 25/45 (55%), Positives = 29/45 (64%)

Query:     5 FFYPWLAASVXXXXXXXXWDIKMDWGLFDKNAPPDNPFLREETVY 49
             FFY W+   +        WD+KMDWGLFDKNA  +N FLREE VY
Sbjct:   510 FFYLWIVFCIISSCYTLIWDLKMDWGLFDKNAG-ENTFLREEIVY 553

GO:0009615 "response to virus" evidence=IEA

GO:0004872 "receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9UBH6 XPR1 "Xenotropic and polytropic retrovirus receptor 1" [Homo sapiens (taxid:9606)]

 Score = 136 (52.9 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 25/45 (55%), Positives = 29/45 (64%)

Query:     5 FFYPWLAASVXXXXXXXXWDIKMDWGLFDKNAPPDNPFLREETVY 49
             FFY W+   +        WD+KMDWGLFDKNA  +N FLREE VY
Sbjct:   510 FFYLWIVFYIISSCYTLIWDLKMDWGLFDKNAG-ENTFLREEIVY 553

GO:0009615 "response to virus" evidence=IEA

GO:0004872 "receptor activity" evidence=TAS

GO:0004888 "transmembrane signaling receptor activity" evidence=TAS

GO:0004930 "G-protein coupled receptor activity" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=TAS

RGD|1306554 Xpr1 "xenotropic and polytropic retrovirus receptor 1" [Rattus norvegicus (taxid:10116)]

 Score = 136 (52.9 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 25/45 (55%), Positives = 29/45 (64%)

Query:     5 FFYPWLAASVXXXXXXXXWDIKMDWGLFDKNAPPDNPFLREETVY 49
             FFY W+   +        WD+KMDWGLFDKNA  +N FLREE VY
Sbjct:   510 FFYLWVVFCIISSCYTLIWDLKMDWGLFDKNAG-ENTFLREEIVY 553

GO:0004872 "receptor activity" evidence=IEA;ISO

GO:0009615 "response to virus" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9R031 Xpr1 "Xenotropic and polytropic retrovirus receptor 1 homolog" [Mus musculus castaneus (taxid:10091)]

 Score = 135 (52.6 bits), Expect = 5.6e-08, P = 5.6e-08
 Identities = 34/86 (39%), Positives = 45/86 (52%)

Query:     5 FFYPWLAASVXXXXXXXXWDIKMDWGLFDKNAPPDNPFLREETVYSSTT---STLIGYVL 61
             FFY W+   +        WD+KMDWGLFDKNA  +N FLREE VY         +I  V+
Sbjct:   510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNAG-ENTFLREEIVYPQKAYYYCAIIEDVI 568

Query:    62 FNPTGILMIQFLQSITC-LGGVVKTL 86
                  I+ I    SIT  +G ++ T+
Sbjct:   569 LRFAWIIQI----SITAHVGDIIATV 590

GO:0004872 "receptor activity" evidence=IDA

GO:0009615 "response to virus" evidence=ISO;IDA

UNIPROTKB|E2J876 Xpr1 "Xenotropic and polytropic retrovirus receptor 1" [Mus musculus domesticus (taxid:10092)]

 Score = 134 (52.2 bits), Expect = 7.1e-08, P = 7.1e-08
 Identities = 25/45 (55%), Positives = 29/45 (64%)

Query:     5 FFYPWLAASVXXXXXXXXWDIKMDWGLFDKNAPPDNPFLREETVY 49
             FFY W+   +        WD+KMDWGLFDKNA  +N FLREE VY
Sbjct:   508 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNAG-ENTFLREEIVY 551

GO:0004872 "receptor activity" evidence=IDA

GO:0009615 "response to virus" evidence=ISO;IDA

MGI|MGI:97932 Xpr1 "xenotropic and polytropic retrovirus receptor 1" [Mus musculus (taxid:10090)]

 Score = 134 (52.2 bits), Expect = 7.2e-08, P = 7.2e-08
 Identities = 25/45 (55%), Positives = 29/45 (64%)

Query:     5 FFYPWLAASVXXXXXXXXWDIKMDWGLFDKNAPPDNPFLREETVY 49
             FFY W+   +        WD+KMDWGLFDKNA  +N FLREE VY
Sbjct:   510 FFYLWVFFCIISSCYTLIWDLKMDWGLFDKNAG-ENTFLREEIVY 553

GO:0004872 "receptor activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0009615 "response to virus" evidence=ISO;IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9QZ70	XPR1_CRIGR	No assigned EC number	0.6444	0.5	0.0632	yes	N/A
Q28CY9	XPR1_XENTR	No assigned EC number	0.6444	0.5	0.0635	yes	N/A
Q9UBH6	XPR1_HUMAN	No assigned EC number	0.6666	0.5	0.0632	yes	N/A
Q9Z0U0	XPR1_MOUSE	No assigned EC number	0.6666	0.5	0.0633	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	88
pfam03124	337	pfam03124, EXS, EXS family	6e-13
COG5409	384	COG5409, COG5409, EXS domain-containing protein [S	0.002

>gnl|CDD|217378 pfam03124, EXS, EXS family

 Score = 61.9 bits (151), Expect = 6e-13
 Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 2   DNPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSS 51
            + +   W+  S+I+SIYS+ WD+KMDWGLF KN+   N FLR++ +Y  
Sbjct: 228 SDAYRILWIVFSIINSIYSFYWDVKMDWGLFQKNSSK-NRFLRDKLLYPR 276

We have named this region the EXS family after (ERD1, XPR1, and SYG1). This family includes C-terminus portions from the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be murine leukaemia virus (MLV) receptors (XPR1). N-terminus portions from these proteins are aligned in the SPX pfam03105 family. The previously noted similarity between SYG1 and MLV receptors over their whole sequences is thus borne out in pfam03105 and this family. While the N-termini aligned in pfam03105 are thought to be involved in signal transduction, the role of the C-terminus sequences aligned in this family is not known. This region of similarity contains several predicted transmembrane helices. This family also includes the ERD1 (ERD: ER retention defective) yeast proteins. ERD1 proteins are involved in the localisation of endogenous endoplasmic reticulum (ER) proteins. erd1 null mutants secrete such proteins even though they possess the C-terminal HDEL ER lumen localisation label sequence. In addition, null mutants also exhibit defects in the Golgi-dependent processing of several glycoproteins, which led to the suggestion that the sorting of luminal ER proteins actually occurs in the Golgi, with subsequent return of these proteins to the ER via `salvage' vesicles. Length = 337

>gnl|CDD|227696 COG5409, COG5409, EXS domain-containing protein [Signal transduction mechanisms]

 Score = 34.8 bits (80), Expect = 0.002
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 6   FYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL 61
           F+  +  ++++SIY+  WD+ MDW   D      +   R  T+     + +I ++L
Sbjct: 266 FHLQIWFALLNSIYTSFWDVFMDWS-LDSLTSLRSWSKRAVTLLKYHIAMIINFLL 320

Length = 384

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	88
PF03124	345	EXS: EXS family; InterPro: IPR004342 The EXS domai	99.93
KOG1162|consensus	617		99.87
COG5409	384	EXS domain-containing protein [Signal transduction	99.59

>PF03124 EXS: EXS family; InterPro: IPR004342 The EXS domain is named after ERD1/XPR1/SYG1 and proteins containing this motif include the C-terminal of the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be Murine leukemia virus (MLV) receptors (XPR1

Probab=99.93  E-value=4.7e-27  Score=177.85  Aligned_cols=83  Identities=29%  Similarity=0.616  Sum_probs=72.7

Q ss_pred             chhHhHHHHHHhhhhhhhhhhcccccCcCCCCCCCCCCCCcccccCCCceEEEEEEEEcC----cchh-----------h
Q psy12163          5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNP----TGIL-----------M   69 (88)
Q Consensus         5 ~~~~wi~~~~inS~Ys~~WDv~mDWgL~~~~~~~~~~~LR~~l~y~~~~~Yy~Aiv~~n~----~~~~-----------~   69 (88)
                      .+.+|++++++||+||++|||+|||||+++++++++++||++++||+|++||+||+ .|.    .|+.           +
T Consensus       237 ~~~~w~~~~~i~s~Ys~~WDv~~DWgL~~~~~~~~~~~LR~~l~~~~~~~Yy~ai~-~n~ilRf~W~~~~~~~~~~~~~~  315 (345)
T PF03124_consen  237 LFILWIIFALINSLYSFYWDVKMDWGLFQPKKKSKNWLLRRRLLYPRKWFYYFAII-LNFILRFAWILTLSPPHFSHIDN  315 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccCCccccCCCCCccccccCCcchhhhHHH-HHHHHHHHHHHHHHHhhcchhhh
Confidence            68899999999999999999999999999885458999999999999999999998 353    3322           3


Q ss_pred             hhHHHHHHHHHhhhhcccC
Q psy12163         70 IQFLQSITCLGGVVKTLAW   88 (88)
Q Consensus        70 ~~~~~~~~~~lEi~RR~iW   88 (88)
                      .+...++++++||+||++|
T Consensus       316 ~~~~~~~~~~lEi~RR~iW  334 (345)
T PF03124_consen  316 SEIFIFILAILEIFRRFIW  334 (345)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            4677899999999999999

The N-terminal of these proteins often have an SPX domain (IPR004331 from INTERPRO) []. While the N-terminal is thought to be involved in signal transduction, the role of the C-terminal is not known. This region of similarity contains several predicted transmembrane helices. This family also includes the ERD1 (ERD: ER retention defective) S. cerevisiae proteins. ERD1 proteins are involved in the localization of endogenous endoplasmic reticulum (ER) proteins. Erd1 null mutants secrete such proteins even though they possess the C-terminal HDEL ER lumen localization label sequence. In addition, null mutants also exhibit defects in the Golgi-dependent processing of several glycoproteins, which led to the suggestion that the sorting of luminal ER proteins actually occurs in the Golgi, with subsequent return of these proteins to the ER via `salvage' vesicles [].; GO: 0016021 integral to membrane

>KOG1162|consensus

Probab=99.87  E-value=1.7e-23  Score=169.69  Aligned_cols=83  Identities=25%  Similarity=0.608  Sum_probs=72.4

Q ss_pred             CcchhHhHHHHHHhhhhhhhhhhcccccCcCCCCCCCCCCCCcccccCCCceEEEEEEE---EcCcchhh----------
Q psy12163          3 NPFFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVL---FNPTGILM----------   69 (88)
Q Consensus         3 ~~~~~~wi~~~~inS~Ys~~WDv~mDWgL~~~~~~~~~~~LR~~l~y~~~~~Yy~Aiv~---~n~~~~~~----------   69 (88)
                      ++++.+|++++.+||+|+++||++|||||+++++  + ++||++++||+|++||+||+.   ++..|+++          
T Consensus       486 ~~~~~l~~~~s~vaS~y~~~WDvv~DWgLl~~~~--~-~~lRd~l~~p~k~vYy~aiv~N~vLR~aW~~~~i~~~~~~~~  562 (617)
T KOG1162|consen  486 SLWFALWILSSKVASLYTTYWDVVMDWGLLNRKS--K-PWLRDNLLYPQKWVYYSAIVLNFVLRFAWFFKTILVFHEEFL  562 (617)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHheecccccccC--c-hhhHHHhcccchheehhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4789999999999999999999999999999886  4 999999999999999999983   23456321          


Q ss_pred             hhHHHHHHHHHhhhhcccC
Q psy12163         70 IQFLQSITCLGGVVKTLAW   88 (88)
Q Consensus        70 ~~~~~~~~~~lEi~RR~iW   88 (88)
                      .+.++++++.+||+||++|
T Consensus       563 ~~~~~~i~a~LEIiRRfiW  581 (617)
T KOG1162|consen  563 SDSMVFIMALLEIIRRFIW  581 (617)
T ss_pred             HHHHHHHHHHHHHHHhhhh
Confidence            3567899999999999999

>COG5409 EXS domain-containing protein [Signal transduction mechanisms]

Probab=99.59  E-value=1.1e-16  Score=123.36  Aligned_cols=78  Identities=23%  Similarity=0.371  Sum_probs=61.5

Q ss_pred             chhHhHHHHHHhhhhhhhhhhcccccCcCCCCCCCCCCCCcccccCCCceEEEEEEEEcC----cchh---------hh-
Q psy12163          5 FFYPWLAASVISSIYSYIWDIKMDWGLFDKNAPPDNPFLREETVYSSTTSTLIGYVLFNP----TGIL---------MI-   70 (88)
Q Consensus         5 ~~~~wi~~~~inS~Ys~~WDv~mDWgL~~~~~~~~~~~LR~~l~y~~~~~Yy~Aiv~~n~----~~~~---------~~-   70 (88)
                      ++.+|++++.+||+||+.|||.|||++..+.++ .+..+|++++++    |++||++ |.    .|+.         +. 
T Consensus       265 l~~l~~~~a~lnS~yT~~WDV~mDW~l~~~~~~-~~~~kr~~~~l~----y~~a~~i-nFllR~~Wi~~~~~~~~~~~~~  338 (384)
T COG5409         265 LFHLQIWFALLNSIYTSFWDVFMDWSLDSLTSL-RSWSKRAVTLLK----YHIAMII-NFLLRFSWIVYYLPPNHIQHSA  338 (384)
T ss_pred             eehHHHHHHHHHHHHHHhHHhheeeeecccccc-hhccccchhHHH----HHHHHHH-HHHHHHHHHHhhcchhhhhhhh
Confidence            678999999999999999999999999777653 456778888777    8898873 43    3432         11 


Q ss_pred             hHHHHHHHHHhhhhcccC
Q psy12163         71 QFLQSITCLGGVVKTLAW   88 (88)
Q Consensus        71 ~~~~~~~~~lEi~RR~iW   88 (88)
                      +...|+++.+||+||++|
T Consensus       339 ~~~~F~m~~lEi~RR~vW  356 (384)
T COG5409         339 DIFIFIMQLLEILRRFVW  356 (384)
T ss_pred             hhHHHHHHHHHHHHhhee
Confidence            222289999999999999

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00