Psyllid ID: psy12202

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
MLRKRSAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLRPYSCPKYKAVCRSNVFRLMQNLILI
ccccccHHHHHHHHHcccccccccccccccccccccccccccccccccHHccccHHHccccccccccccccEEEEEEEEEccccccccccccccccccccccccEEEEccccccHHHHHHHHHcHHHHHHHcccccccccccccccccccccccccc
ccccccHHEHHHHEEEccccccHHcccEcccEccccccccccHHHHHHHHHHHHHHcHHHHHEEEcccccccEEEEEEEcccEEEEEccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcc
MLRKRSAVQLYSMVScstgcdplsykgygcycgflgsgypvdpidrtsqlnmardhdsghEIYIIFIYSGVvsyttgaiqgptvlsfsnissptcgpasedgpyvvskaskrgkscshrlcecdrrfseclrpyscpkykavCRSNVFRLMQNLILI
MLRKRSAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKAskrgkscshrlcecdrrfseclrpyscpkykavcrSNVFRLMQNLILI
MLRKRSAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLRPYSCPKYKAVCRSNVFRLMQNLILI
*******VQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNI*************************CSHRLCECDRRFSECLRPYSCPKYKAVCRSNVFRLMQNLIL*
**RKRSAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLRPYSCPKYKAVCRSNVFRLMQNLILI
*********LYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVV***********HRLCECDRRFSECLRPYSCPKYKAVCRSNVFRLMQNLILI
****RSAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLRPYSCPKYKAVCRSNVFRLMQNLILI
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLRKRSAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLRPYSCPKYKAVCRSNVFRLMQNLILI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query157 2.2.26 [Sep-21-2011]
P04055146 Phospholipase A2 OS=Rattu yes N/A 0.713 0.767 0.297 1e-05
Q8WS88156 Phospholipase A2 OS=Adams N/A N/A 0.280 0.282 0.477 3e-05
P43434146 Phospholipase A2 OS=Cavia yes N/A 0.694 0.746 0.278 8e-05
Q9Z0Y2146 Phospholipase A2 OS=Mus m yes N/A 0.694 0.746 0.296 9e-05
D2X8K2119 Phospholipase A2 OS=Condy N/A N/A 0.242 0.319 0.526 0.0001
P04054148 Phospholipase A2 OS=Homo yes N/A 0.662 0.702 0.3 0.0001
P20255118 Basic phospholipase A2 PA N/A N/A 0.312 0.415 0.446 0.0002
P04056118 Basic phospholipase A2 PA N/A N/A 0.312 0.415 0.446 0.0002
P04416124 Phospholipase A2, minor i yes N/A 0.242 0.306 0.55 0.0003
Q8UUH9155 Basic phospholipase A2 PC N/A N/A 0.770 0.780 0.272 0.0003
>sp|P04055|PA21B_RAT Phospholipase A2 OS=Rattus norvegicus GN=Pla2g1b PE=1 SV=1 Back     alignment and function desciption
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 57/138 (41%), Gaps = 26/138 (18%)

Query: 2   LRKRSAVQLYSMVSCST-GCDPL-SYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSG 59
           +  R+  Q  +M+ C+  G DPL  Y  YGCYCG  GSG PVD +DR  Q     DH   
Sbjct: 19  ISTRAVWQFRNMIKCTIPGSDPLREYNNYGCYCGLGGSGTPVDDLDRCCQ---THDH--- 72

Query: 60  HEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHR 119
                 +  +  +      I  P    ++N  S  C          V   S +   C   
Sbjct: 73  -----CYNQAKKLESCKFLIDNP----YTNTYSYKCSGN-------VITCSDKNNDCESF 116

Query: 120 LCECDRRFSECLR--PYS 135
           +C CDR+ + C    PY+
Sbjct: 117 ICNCDRQAAICFSKVPYN 134
PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides.
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: 4
>sp|Q8WS88|PA2_ADAPA Phospholipase A2 OS=Adamsia palliata PE=2 SV=1 Back     alignment and function description
>sp|P43434|PA21B_CAVPO Phospholipase A2 OS=Cavia porcellus GN=PLA2G1B PE=2 SV=1 Back     alignment and function description
>sp|Q9Z0Y2|PA21B_MOUSE Phospholipase A2 OS=Mus musculus GN=Pla2g1b PE=2 SV=1 Back     alignment and function description
>sp|D2X8K2|PA2_CONGI Phospholipase A2 OS=Condylactis gigantea PE=1 SV=1 Back     alignment and function description
>sp|P04054|PA21B_HUMAN Phospholipase A2 OS=Homo sapiens GN=PLA2G1B PE=1 SV=3 Back     alignment and function description
>sp|P20255|PA2BF_PSEAU Basic phospholipase A2 PA-12A OS=Pseudechis australis PE=1 SV=1 Back     alignment and function description
>sp|P04056|PA2BB_PSEAU Basic phospholipase A2 PA-11 OS=Pseudechis australis PE=1 SV=1 Back     alignment and function description
>sp|P04416|PA22_PIG Phospholipase A2, minor isoenzyme OS=Sus scrofa PE=1 SV=1 Back     alignment and function description
>sp|Q8UUH9|PA2B9_LATCO Basic phospholipase A2 PC9 OS=Laticauda colubrina PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query157
156540704 273 PREDICTED: hypothetical protein LOC10011 0.840 0.483 0.451 3e-26
380015133173 PREDICTED: phospholipase A2-like [Apis f 0.840 0.763 0.451 2e-25
66545346162 PREDICTED: phospholipase A2 homolog 1 [A 0.840 0.814 0.451 2e-25
383852970222 PREDICTED: phospholipase A2-like [Megach 0.840 0.594 0.451 1e-24
340728085154 PREDICTED: phospholipase A2 homolog 1-li 0.847 0.863 0.448 2e-24
350420396154 PREDICTED: phospholipase A2 homolog 1-li 0.847 0.863 0.448 2e-24
307180198 263 Phospholipase A2-like protein 1 [Campono 0.840 0.501 0.438 7e-24
307209894196 Probable phospholipase A2 [Harpegnathos 0.840 0.673 0.438 3e-23
312374729 1463 hypothetical protein AND_15595 [Anophele 0.885 0.095 0.358 5e-23
193610793195 PREDICTED: phospholipase A2-like [Acyrth 0.757 0.610 0.392 3e-22
>gi|156540704|ref|XP_001601787.1| PREDICTED: hypothetical protein LOC100117598 [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 93/155 (60%), Gaps = 23/155 (14%)

Query: 4   KRSAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIY 63
           KR+   LY+M+ C+TGC+PL+YKGYGCYCGFLGSGYP+D IDR  ++     HD  +E  
Sbjct: 140 KRAVTHLYNMIVCATGCNPLAYKGYGCYCGFLGSGYPMDGIDRCCKM-----HDWCYEAT 194

Query: 64  IIFIY-SGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCE 122
              ++    V Y     +G           P C  A E G +  S       SC+ RLCE
Sbjct: 195 DCPMFVEYFVPYYWKCYRG---------YKPIC--AIEHGEWGSS------GSCAQRLCE 237

Query: 123 CDRRFSECLRPYSCPKYKAVCRSNVFRLMQNLILI 157
           CDR F+ECLR Y CP++KAVC S+ +RL+QN+ +I
Sbjct: 238 CDRSFAECLRRYRCPRHKAVCTSSPWRLIQNIFMI 272

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|380015133|ref|XP_003691564.1| PREDICTED: phospholipase A2-like [Apis florea] Back     alignment and taxonomy information
>gi|66545346|ref|XP_624621.1| PREDICTED: phospholipase A2 homolog 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|383852970|ref|XP_003701998.1| PREDICTED: phospholipase A2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340728085|ref|XP_003402361.1| PREDICTED: phospholipase A2 homolog 1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350420396|ref|XP_003492495.1| PREDICTED: phospholipase A2 homolog 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|307180198|gb|EFN68231.1| Phospholipase A2-like protein 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307209894|gb|EFN86673.1| Probable phospholipase A2 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|312374729|gb|EFR22222.1| hypothetical protein AND_15595 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|193610793|ref|XP_001948432.1| PREDICTED: phospholipase A2-like [Acyrthosiphon pisum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query157
FB|FBgn0039655373 CG14507 [Drosophila melanogast 0.745 0.313 0.370 8.6e-14
ZFIN|ZDB-GENE-040718-41153 zgc:92162 "zgc:92162" [Danio r 0.267 0.274 0.5 1.1e-12
RGD|61949146 Pla2g1b "phospholipase A2, gro 0.312 0.335 0.481 3.6e-12
UNIPROTKB|F1NZ96142 PLA2G2E "Uncharacterized prote 0.210 0.232 0.575 9.2e-12
UNIPROTKB|E1C202158 PLA2G10 "Uncharacterized prote 0.280 0.278 0.5 1.2e-11
UNIPROTKB|P04054148 PLA2G1B "Phospholipase A2" [Ho 0.286 0.304 0.489 2.4e-11
MGI|MGI:101842146 Pla2g1b "phospholipase A2, gro 0.312 0.335 0.462 3.1e-11
UNIPROTKB|I3LV50146 PLA2G1B "Phospholipase A2, maj 0.343 0.369 0.448 3.9e-11
UNIPROTKB|F1NII2154 F1NII2 "Uncharacterized protei 0.267 0.272 0.428 6.3e-11
UNIPROTKB|P04416124 P04416 "Phospholipase A2, mino 0.299 0.379 0.490 8e-11
FB|FBgn0039655 CG14507 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 184 (69.8 bits), Expect = 8.6e-14, P = 8.6e-14
 Identities = 47/127 (37%), Positives = 62/127 (48%)

Query:     4 KRSAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIY 63
             KR   +LYSM+ CSTGCDPL YKGYGCYCGF G G P D IDR  +++   D   G    
Sbjct:   241 KRDVARLYSMIKCSTGCDPLIYKGYGCYCGFGGHGVPADGIDRCCRVH---DKCYGQSNC 297

Query:    64 IIFIYSGVVSYTTGAIQGPTVLSFSN--ISSP-TCGPASEDGPYVVSKASKRGKSCSHR- 119
             I ++    V Y     +G  + +  +     P +C          +S+  KR   C HR 
Sbjct:   298 ISYL-EYFVPYVWKCYRGKPLCAVDHGEFGGPDSCAARLCQCDLRLSRCLKR-YYCPHRR 355

Query:   120 -LCECDR 125
              +C   R
Sbjct:   356 SICHSSR 362
GO:0004623 "phospholipase A2 activity" evidence=ISS
GO:0006644 "phospholipid metabolic process" evidence=IEA
GO:0005509 "calcium ion binding" evidence=IEA
GO:0016042 "lipid catabolic process" evidence=IEA
ZFIN|ZDB-GENE-040718-41 zgc:92162 "zgc:92162" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|61949 Pla2g1b "phospholipase A2, group IB, pancreas" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NZ96 PLA2G2E "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1C202 PLA2G10 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P04054 PLA2G1B "Phospholipase A2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:101842 Pla2g1b "phospholipase A2, group IB, pancreas" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|I3LV50 PLA2G1B "Phospholipase A2, major isoenzyme" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NII2 F1NII2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P04416 P04416 "Phospholipase A2, minor isoenzyme" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1.4LOW CONFIDENCE prediction!
3rd Layer3.1.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query157
cd00125115 cd00125, PLA2c, PLA2c: Phospholipase A2, a family 8e-18
pfam00068116 pfam00068, Phospholip_A2_1, Phospholipase A2 2e-09
smart00085117 smart00085, PA2c, Phospholipase A2 2e-06
cd04707117 cd04707, otoconin_90, otoconin_90: Phospholipase A 1e-05
>gnl|CDD|153091 cd00125, PLA2c, PLA2c: Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent Back     alignment and domain information 
 Score = 73.8 bits (182), Expect = 8e-18
 Identities = 48/145 (33%), Positives = 58/145 (40%), Gaps = 47/145 (32%)

Query: 6   SAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHD-------- 57
           + +Q   M+ C+TG   L Y GYGCYCG  GSG PVD  DR  Q+     HD        
Sbjct: 1   NLLQFGKMIKCTTGRSALDYNGYGCYCGLGGSGTPVDDTDRCCQV-----HDCCYDRAEK 55

Query: 58  SGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCS 117
            G   Y    Y    SYT            S+    TC  A+                C+
Sbjct: 56  GGCSPYFT-SY----SYT-----------CSD-GQITCSDAN--------------DKCA 84

Query: 118 HRLCECDRRFSECLR--PYSCPKYK 140
             LCECDR  + C    PY  PKY+
Sbjct: 85  RALCECDRAAALCFARAPY-NPKYR 108

PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a metal-dependent reaction, to generate lysophospholipid (LysoPL) and a free fatty acid (FA). The resulting products are either dietary or used in synthetic pathways for leukotrienes and prostaglandins. Often, arachidonic acid is released as a free fatty acid and acts as second messenger in signaling networks. Secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis (LysoPL and FA) cannot form bilayers leading to a change in membrane conformation and ultimately to a block in the release of neurotransmitters. PLA2 may form dimers or oligomers. Length = 115
>gnl|CDD|200972 pfam00068, Phospholip_A2_1, Phospholipase A2 Back     alignment and domain information
>gnl|CDD|214508 smart00085, PA2c, Phospholipase A2 Back     alignment and domain information
>gnl|CDD|153096 cd04707, otoconin_90, otoconin_90: Phospholipase A2-like domains present in otoconin-90 and otoconin-95, mammal proteins that are principal matrix proteins of calcitic otoconia Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 157
cd00125115 PLA2c PLA2c: Phospholipase A2, a family of secreto 100.0
cd04707117 otoconin_90 otoconin_90: Phospholipase A2-like dom 100.0
KOG4087|consensus144 100.0
PF00068116 Phospholip_A2_1: Phospholipase A2; InterPro: IPR00 100.0
smart00085117 PA2c Phospholipase A2. 100.0
cd0061883 PLA2_like PLA2_like: Phospholipase A2, a super-fam 99.86
cd04706117 PLA2_plant PLA2_plant: Plant-specific sub-family o 99.17
cd0470497 PLA2_bee_venom_like PLA2_bee_venom_like: A sub-fam 98.51
PF0582699 Phospholip_A2_2: Phospholipase A2; InterPro: IPR00 96.88
PF0839864 Parvo_coat_N: Parvovirus coat protein VP1; InterPr 96.55
cd04705100 PLA2_group_III_like PLA2_group_III_like: A sub-fam 94.01
>cd00125 PLA2c PLA2c: Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent Back     alignment and domain information 
Probab=100.00  E-value=8e-40  Score=247.63  Aligned_cols=106  Identities=37%  Similarity=0.660  Sum_probs=98.0

Q ss_pred             cHHHHHHHHhhhcCCCcccccCCccccCCCCCCCCcCccCCccccccccchhhHHhhhhhcccCCc-ceeeEEeecCCcc
Q psy12202          6 SAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGV-VSYTTGAIQGPTV   84 (157)
Q Consensus         6 ~l~qf~~Mi~c~tg~~~l~Y~~YGCyCg~gG~G~PVD~iDrcC~~~~~~~Hd~CY~~~~~~~c~~~-~~Y~~~~~~~~~~   84 (157)
                      +|+||++||+|+||++|++|++||||||+||+|+|||+|||||+.     ||.||+.+....|.|+ .+|+|++.++   
T Consensus         1 ~l~qf~~MI~c~tgr~~~~Y~~YGCyCG~GG~G~PvD~~DrCC~~-----HD~CY~~~~~~~C~p~~~~Y~y~~~~~---   72 (115)
T cd00125           1 NLLQFGKMIKCTTGRSALDYNGYGCYCGLGGSGTPVDDTDRCCQV-----HDCCYDRAEKGGCSPYFTSYSYTCSDG---   72 (115)
T ss_pred             CHHHHHHHHHHhcCCCHHHHhhcCCccCCCCCCCCcccHHHHHHH-----HHhHHhccccCCCccccccceEEEECC---
Confidence            589999999999999999999999999999999999999999999     9999999976778887 9999999877   


Q ss_pred             cccCCCCCceeCCCCCCCCceeeccCCCCChhhhhhchhhHHHHHHhccCCCCCCc
Q psy12202         85 LSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLRPYSCPKYK  140 (157)
Q Consensus        85 ~s~~~~~~i~C~~~~~~~~~~~~~~~~~~~~C~~~lCeCDr~~A~C~~~~~~~~~~  140 (157)
                             .|+|.              +..++|+++||||||++|+||++++|+.+.
T Consensus        73 -------~i~C~--------------~~~~~C~~~~CeCDr~aa~Cf~~~~yn~~~  107 (115)
T cd00125          73 -------QITCS--------------DANDKCARALCECDRAAALCFARAPYNPKY  107 (115)
T ss_pred             -------cceEC--------------cCCChHhHHHhHccHHHHHHHhhCcCChhh
Confidence                   89994              456899999999999999999999987653

PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a metal-dependent reaction, to generate lysophospholipid (LysoPL) and a free fatty acid (FA). The resulting products are either dietary or used in synthetic pathways for leukotrienes and prostaglandins. Often, arachidonic acid is released as a free fatty acid and acts as second messenger in signaling networks. Secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis (LysoPL and FA) cannot form bilayers leading to a change in membrane conformation and ultimately to a block in
>cd04707 otoconin_90 otoconin_90: Phospholipase A2-like domains present in otoconin-90 and otoconin-95, mammal proteins that are principal matrix proteins of calcitic otoconia Back     alignment and domain information
>KOG4087|consensus Back     alignment and domain information
>PF00068 Phospholip_A2_1: Phospholipase A2; InterPro: IPR001211 Phospholipase A2 (3 Back     alignment and domain information
>smart00085 PA2c Phospholipase A2 Back     alignment and domain information
>cd00618 PLA2_like PLA2_like: Phospholipase A2, a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent Back     alignment and domain information
>cd04706 PLA2_plant PLA2_plant: Plant-specific sub-family of Phospholipase A2, a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent Back     alignment and domain information
>cd04704 PLA2_bee_venom_like PLA2_bee_venom_like: A sub-family of Phospholipase A2, similar to bee venom PLA2 Back     alignment and domain information
>PF05826 Phospholip_A2_2: Phospholipase A2; InterPro: IPR001211 Phospholipase A2 (3 Back     alignment and domain information
>PF08398 Parvo_coat_N: Parvovirus coat protein VP1; InterPro: IPR013607 Parvoviruses are some of the smallest viruses containing linear, non-segmented single-stranded DNA genomes, with an average genome size of 5000 nucleotides Back     alignment and domain information
>cd04705 PLA2_group_III_like PLA2_group_III_like: A sub-family of Phospholipase A2, similar to human group III PLA2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query157
3elo_A133 Crystal Structure Of Human Pancreatic Prophospholip 1e-05
3v9m_A118 Phospholipase Acii4 From Australian King Brown Snak 2e-05
1hn4_A131 Prophospholipase A2 Dimer Complexed With Mj33, Sulf 5e-05
3g8g_A122 Crystal Structure Of Phospholipase A2 Ammodytoxin A 5e-05
3g8h_A122 Crystal Structure Of Phospholipase A2 Ammodytoxin C 5e-05
2bp2_A130 The Structure Of Bovine Pancreatic Prophospholipase 6e-05
4bp2_A130 Crystallographic Refinement Of Bovine Pro-Phospholi 7e-05
1p7o_A124 Crystal Structure Of Phospholipase A2 (Mipla4) From 7e-05
1tgm_A121 Crystal Structure Of A Complex Formed Between Group 8e-05
1pwo_A124 Crystal Structure Of Phospholipase A2 (Mipla2) From 8e-05
1ozy_A121 Crystal Structure Of Phospholipase A2 (mipla3) From 1e-04
5p2p_A119 X-Ray Structure Of Phospholipase A2 Complexed With 1e-04
1po8_A118 Crystal Structure Of A Complex Formed Between Krait 1e-04
1cl5_A121 Crystal Structure Of Phospholipase A2 From Daboia R 2e-04
2phi_A124 A Large Conformational Change Is Found In The Cryst 2e-04
1oyf_B121 Crystal Structure Of Russelles Viper (Daboia Russel 2e-04
1oyf_A121 Crystal Structure Of Russelles Viper (Daboia Russel 2e-04
1fx9_A124 Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + 2e-04
2zp4_A123 Carboxylic Ester Hydrolase, Single Mutant H48n Of B 2e-04
3p2p_A119 Enhanced Activity And Altered Specificity Of Phosph 2e-04
1dpy_A118 Three-Dimensional Structure Of A Novel Phospholipas 3e-04
1gp7_A151 Acidic Phospholipase A2 From Venom Of Ophiophagus H 5e-04
1gh4_A123 Structure Of The Triple Mutant (K56m, K120m, K121m) 5e-04
1y6o_A131 Crystal Structure Of Disulfide Engineered Porcine P 6e-04
1mks_A123 Carboxylic Ester Hydrolase, Trigonal Form Of The Tr 6e-04
1fe5_A118 Sequence And Crystal Structure Of A Basic Phospholi 6e-04
1bpq_A123 Phospholipase A2 Engineering. X-Ray Structural And 6e-04
1irb_A123 Carboxylic Ester Hydrolase Length = 123 7e-04
2bch_A123 A Possible Of Second Calcium Ion In Interfacial Bin 7e-04
1c74_A123 Structure Of The Double Mutant (K53,56m) Of Phospho 7e-04
2zp3_A123 Carboxylic Ester Hydrolase, Single Mutant D49n Of B 7e-04
1ceh_A123 Structure And Function Of The Catalytic Site Mutant 7e-04
1vl9_A123 Atomic Resolution (0.97a) Structure Of The Triple M 7e-04
1o2e_A123 Structure Of The Triple Mutant (K53,56,120m) + Anis 7e-04
1g2x_A118 Sequence Induced Trimerization Of Krait Pla2: Cryst 7e-04
1kvx_A123 Carboxylic Ester Hydrolase, Single Mutant D99a Of B 7e-04
1kvy_A123 Carboxylic Ester Hydrolase, Single Mutant D49e Coor 7e-04
2zp5_A123 Carboxylic Ester Hydrolase, Single Mutant D49k Of B 7e-04
1kvw_A123 Carboxylic Ester Hydrolase, Single Mutant H48q Of B 7e-04
1bvm_A123 Solution Nmr Structure Of Bovine Pancreatic Phospho 7e-04
3bp2_A123 Role Of The N-Terminus In The Interaction Of Pancre 7e-04
1bjj_A122 Agkistrodotoxin, A Phospholipase A2-Type Presynapti 8e-04
>pdb|3ELO|A Chain A, Crystal Structure Of Human Pancreatic Prophospholipase A2 Length = 133 Back     alignment and structure 
Iteration: 1

 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 57/140 (40%), Gaps = 36/140 (25%)
Query: 5   RSAVQLYSMVSCST-GCDP-LSYKGYGCYCGFLGSGYPVDPIDRTSQL-----NMARDHD 57
           R+  Q   M+ C   G DP L Y  YGCYCG  GSG PVD +D+  Q      + A+  D
Sbjct: 7   RAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLD 66
Query: 58  SGHEIYIIFIYSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCS 117
           S  +  +   Y+   SY+               S+ TC              S + K C 
Sbjct: 67  SC-KFLLDNPYTHTYSYSCSG------------SAITC--------------SSKNKECE 99
Query: 118 HRLCECDRRFSECLR--PYS 135
             +C CDR  + C    PY+
Sbjct: 100 AFICNCDRNAAICFSKAPYN 119
>pdb|3V9M|A Chain A, Phospholipase Acii4 From Australian King Brown Snake Length = 118 Back     alignment and structure
>pdb|1HN4|A Chain A, Prophospholipase A2 Dimer Complexed With Mj33, Sulfate, And Calcium Length = 131 Back     alignment and structure
>pdb|3G8G|A Chain A, Crystal Structure Of Phospholipase A2 Ammodytoxin A From Vipera Ammodytes Ammodytes Length = 122 Back     alignment and structure
>pdb|3G8H|A Chain A, Crystal Structure Of Phospholipase A2 Ammodytoxin C From Vipera Ammodytes Ammodytes Length = 122 Back     alignment and structure
>pdb|2BP2|A Chain A, The Structure Of Bovine Pancreatic Prophospholipase A2 At 3.0 Angstroms Resolution Length = 130 Back     alignment and structure
>pdb|4BP2|A Chain A, Crystallographic Refinement Of Bovine Pro-Phospholipase A2 At 1.6 Angstroms Resolution Length = 130 Back     alignment and structure
>pdb|1P7O|A Chain A, Crystal Structure Of Phospholipase A2 (Mipla4) From Micropechis Ikaheka Length = 124 Back     alignment and structure
>pdb|1TGM|A Chain A, Crystal Structure Of A Complex Formed Between Group Ii Phospholipase A2 And Aspirin At 1.86 A Resolution Length = 121 Back     alignment and structure
>pdb|1PWO|A Chain A, Crystal Structure Of Phospholipase A2 (Mipla2) From Micropechis Ikaheka Length = 124 Back     alignment and structure
>pdb|1OZY|A Chain A, Crystal Structure Of Phospholipase A2 (mipla3) From Micropechis Ikaheka Length = 121 Back     alignment and structure
>pdb|5P2P|A Chain A, X-Ray Structure Of Phospholipase A2 Complexed With A Substrate-Derived Inhibitor Length = 119 Back     alignment and structure
>pdb|1PO8|A Chain A, Crystal Structure Of A Complex Formed Between Krait Venom Phospholipase A2 And Heptanoic Acid At 2.7 A Resolution. Length = 118 Back     alignment and structure
>pdb|1CL5|A Chain A, Crystal Structure Of Phospholipase A2 From Daboia Russelli Pulchella Length = 121 Back     alignment and structure
>pdb|2PHI|A Chain A, A Large Conformational Change Is Found In The Crystal Structure Of The Porcine Pancreatic Phospholipase A2 Point Mutant F63v Length = 124 Back     alignment and structure
>pdb|1OYF|B Chain B, Crystal Structure Of Russelles Viper (Daboia Russellii Pulchella) Phospholipase A2 In A Complex With Venom 6- Methyl Heptanol Length = 121 Back     alignment and structure
>pdb|1OYF|A Chain A, Crystal Structure Of Russelles Viper (Daboia Russellii Pulchella) Phospholipase A2 In A Complex With Venom 6- Methyl Heptanol Length = 121 Back     alignment and structure
>pdb|1FX9|A Chain A, Carboxylic Ester Hydrolase Complex (Dimeric Pla2 + Mj33 Inhibitor + Sulphate Ions) Length = 124 Back     alignment and structure
>pdb|2ZP4|A Chain A, Carboxylic Ester Hydrolase, Single Mutant H48n Of Bovine Pancreatic Pla2 Enzyme Length = 123 Back     alignment and structure
>pdb|3P2P|A Chain A, Enhanced Activity And Altered Specificity Of Phospholipase A2 By Deletion Of A Surface Loop Length = 119 Back     alignment and structure
>pdb|1DPY|A Chain A, Three-Dimensional Structure Of A Novel Phospholipase A2 From Indian Common Krait At 2.45 A Resolution Length = 118 Back     alignment and structure
>pdb|1GP7|A Chain A, Acidic Phospholipase A2 From Venom Of Ophiophagus Hannah Length = 151 Back     alignment and structure
>pdb|1GH4|A Chain A, Structure Of The Triple Mutant (K56m, K120m, K121m) Of Phospholipase A2 Length = 123 Back     alignment and structure
>pdb|1Y6O|A Chain A, Crystal Structure Of Disulfide Engineered Porcine Pancreatic Phospholipase A2 To Group-X Isozyme In Complex With Inhibitor Mj33 And Phosphate Ions Length = 131 Back     alignment and structure
>pdb|1MKS|A Chain A, Carboxylic Ester Hydrolase, Trigonal Form Of The Triple Mutant Length = 123 Back     alignment and structure
>pdb|1FE5|A Chain A, Sequence And Crystal Structure Of A Basic Phospholipase A2 From Common Krait (Bungarus Caeruleus) At 2.4 Resolution: Identification And Characterization Of Its Pharmacological Sites Length = 118 Back     alignment and structure
>pdb|1BPQ|A Chain A, Phospholipase A2 Engineering. X-Ray Structural And Functional Evidence For The Interaction Of Lysine-56 With Substrates Length = 123 Back     alignment and structure
>pdb|1IRB|A Chain A, Carboxylic Ester Hydrolase Length = 123 Back     alignment and structure
>pdb|2BCH|A Chain A, A Possible Of Second Calcium Ion In Interfacial Binding: Atomic And Medium Resolution Crystal Structures Of The Quadruple Mutant Of Phospholipase A2 Length = 123 Back     alignment and structure
>pdb|1C74|A Chain A, Structure Of The Double Mutant (K53,56m) Of Phospholipase A2 Length = 123 Back     alignment and structure
>pdb|2ZP3|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49n Of Bovine Pancreatic Pla2 Enzyme Length = 123 Back     alignment and structure
>pdb|1CEH|A Chain A, Structure And Function Of The Catalytic Site Mutant Asp99asn Of Phospholipase A2: Absence Of Conserved Structural Water Length = 123 Back     alignment and structure
>pdb|1VL9|A Chain A, Atomic Resolution (0.97a) Structure Of The Triple Mutant (K53,56,121m) Of Bovine Pancreatic Phospholipase A2 Length = 123 Back     alignment and structure
>pdb|1O2E|A Chain A, Structure Of The Triple Mutant (K53,56,120m) + Anisic Acid Complex Of Phospholipase A2 Length = 123 Back     alignment and structure
>pdb|1G2X|A Chain A, Sequence Induced Trimerization Of Krait Pla2: Crystal Structure Of The Trimeric Form Of Krait Pla2 Length = 118 Back     alignment and structure
>pdb|1KVX|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D99a Of Bovine Pancreatic Pla2, 1.9 A Orthorhombic Form Length = 123 Back     alignment and structure
>pdb|1KVY|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49e Coordinated To Calcium Length = 123 Back     alignment and structure
>pdb|2ZP5|A Chain A, Carboxylic Ester Hydrolase, Single Mutant D49k Of Bovine Pancreatic Pla2 Enzyme Length = 123 Back     alignment and structure
>pdb|1KVW|A Chain A, Carboxylic Ester Hydrolase, Single Mutant H48q Of Bovine Pancreatic Pla2 Enzyme Length = 123 Back     alignment and structure
>pdb|1BVM|A Chain A, Solution Nmr Structure Of Bovine Pancreatic Phospholipase A2, 20 Structures Length = 123 Back     alignment and structure
>pdb|3BP2|A Chain A, Role Of The N-Terminus In The Interaction Of Pancreatic Phospholipase A2 With Aggregated Substrates. Properties And Crystal Structure Of Transaminated Phospholipase A2 Length = 123 Back     alignment and structure
>pdb|1BJJ|A Chain A, Agkistrodotoxin, A Phospholipase A2-Type Presynaptic Neurotoxin From Agkistrodon Halys Pallas Length = 122 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query157
1g0z_A118 Phospholipase A2; toxin; 2.18A {Bungarus caeruleus 2e-13
1n28_B124 Phospholipase A2, membrane associated; hydrolase; 3e-12
1le6_A123 Group X secretory phospholipase A2; human phosphat 5e-12
3jql_A119 Phospholipase A2 isoform 3; phospholipase A2, hexa 6e-12
1oz6_A120 Phospholipase A2; enzyme, PLA2, hydrolase; 2.60A { 9e-12
1vip_A121 Phospholipase A2; hydrolase, anticoagulant; 2.20A 1e-11
2g58_A121 Phospholipase A2 VRV-PL-VIIIA; phospholipase A2, d 2e-11
1p7o_A124 Phospholipase A2, mipla4; pancreatic loop, HYDR; 2 2e-11
3dih_A122 Phospholipase A2 homolog, ammodytin L; phospholipa 2e-11
1mc2_A122 Acutohaemonlysin, phospholipase A2; YS49-phospholi 2e-11
2aoz_A121 Myotoxin II, phospholipase A2 homolog; X-RAY diffr 3e-11
1jlt_A122 Phospholipase A2 inhibitor; heterodimer complex, h 4e-11
1jia_A122 Phospholipase A2; agkistrodon haLys pallas; 2.13A 5e-11
1gp7_A151 Phospholipase A2; snake venom, KING cobra, cardiot 1e-10
3r0l_D122 Phospholipase A2 CB; crotoxin, presynaptic neuroto 1e-10
1zlb_A122 Hypotensive phospholipase A2; Asp49-PLA2, toxin, s 1e-10
1bun_A120 BETA2-bungarotoxin; hydrolase, presynaptic neuroto 2e-10
1m8r_A124 Phospholipase A2; phopholipase A2-metal cation com 2e-10
2h4c_B122 Phospholipase A2-II; non-inhibitor acidic PLA2, ba 3e-10
1gmz_A122 Phospholipase A2; hydrolase, neurotoxic; 2.4A {Bot 4e-10
3vbz_A118 Phospholipase A2 homolog, taipoxin beta chain; pho 5e-10
4e4c_A119 Phospholipase A2; hydrolase; HET: MES; 1.80A {Note 8e-10
1jlt_B122 Phospholipase A2, vipoxin; heterodimer complex, hy 1e-09
2qhd_A122 Phospholipase A2; beta sheet, three helices, prote 1e-09
1g4i_A123 Phospholipase A2; lipid degradation, hydrolase; 0. 2e-09
1m8t_A119 Phospholipase A2; twinned crystal, alpha, beta, hy 2e-08
>1g0z_A Phospholipase A2; toxin; 2.18A {Bungarus caeruleus} SCOP: a.133.1.2 PDB: 1u4j_A* 1g2x_A 2osn_A 1dpy_A 1fe5_A 1tc8_A* 1po8_A* Length = 118 Back     alignment and structure
 Score = 61.9 bits (150), Expect = 2e-13
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 29/128 (22%)

Query: 6   SAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYII 65
           +  Q  +M+ C+      SY GYGCYCG+ GSG PVD +DR         HD  +     
Sbjct: 1   NLKQFKNMIQCAGTRTWTSYIGYGCYCGYGGSGTPVDELDRCCY-----THDHCYN---- 51

Query: 66  FIYSGVVSYTTGAIQGPTVLSFSNIS-SPTCGPASEDGPYVVSKASKRGKSCSHRLCECD 124
                  +   G        S++    + TC   S               SC+  +C+CD
Sbjct: 52  -----KAANIPGCNPLIKTYSYTCTKPNITCNDTS--------------DSCARFICDCD 92

Query: 125 RRFSECLR 132
           R  + C  
Sbjct: 93  RTAAICFA 100
>1n28_B Phospholipase A2, membrane associated; hydrolase; 1.50A {Homo sapiens} SCOP: a.133.1.2 PDB: 1n29_A 1kvo_A* 1ayp_A 1db4_A* 1db5_A* 1dcy_A* 1j1a_A* 1bbc_A* 1kqu_A* 1pod_A 1poe_A* Length = 124 Back     alignment and structure
>1le6_A Group X secretory phospholipase A2; human phosphatidylcholine 2-acylhydrolase GX, GX SPLA2, SPLA2-X; 1.97A {Homo sapiens} SCOP: a.133.1.2 PDB: 1le7_A Length = 123 Back     alignment and structure
>3jql_A Phospholipase A2 isoform 3; phospholipase A2, hexapeptide, hydrolase, calcium, disulfide bond, lipid degradation, metal-binding, secreted; 1.20A {Naja sagittifera} PDB: 1mf4_A 3jq5_A 1ln8_A 3jti_A 3nju_A* 3osh_A* 3q4y_A 1t37_A 1zm6_A 3gci_A 1yxl_A 1oxr_A 1td7_A* 1sz8_A 1a3d_A 1a3f_A 1psh_A 2osh_A 1poa_A 1pob_A* ... Length = 119 Back     alignment and structure
>1oz6_A Phospholipase A2; enzyme, PLA2, hydrolase; 2.60A {Echis carinatus} SCOP: a.133.1.2 Length = 120 Back     alignment and structure
>1vip_A Phospholipase A2; hydrolase, anticoagulant; 2.20A {Daboia russellii russellii} SCOP: a.133.1.2 Length = 121 Back     alignment and structure
>2g58_A Phospholipase A2 VRV-PL-VIIIA; phospholipase A2, diars, hydrolase-hydrolase inhibitor compl; HET: PHQ; 0.98A {Daboia russellii pulchella} SCOP: a.133.1.2 PDB: 1cl5_A 1fb2_A* 1jq8_A 1jq9_A 1kpm_A* 1oxl_A* 1fv0_A* 1q7a_A 1skg_A* 1sv3_A* 1sv9_A* 1sxk_A* 1tdv_A 1tg1_A* 1tg4_A 1th6_A* 1sqz_A 1tjq_A* 1tk4_A 1tp2_A* ... Length = 121 Back     alignment and structure
>1p7o_A Phospholipase A2, mipla4; pancreatic loop, HYDR; 2.30A {Micropechis ikaheka} SCOP: a.133.1.2 PDB: 1pwo_A 1ozy_A Length = 124 Back     alignment and structure
>3dih_A Phospholipase A2 homolog, ammodytin L; phospholipase A2 fold, myotoxin, secreted, toxin; 2.60A {Vipera ammodytes ammodytes} PDB: 3ux7_A Length = 122 Back     alignment and structure
>1mc2_A Acutohaemonlysin, phospholipase A2; YS49-phospholipase A2, snake venom, toxin; 0.85A {Deinagkistrodon acutus} SCOP: a.133.1.2 PDB: 1mg6_A 1pa0_A 3i03_A* 3hzd_A 3hzw_A* 3cxi_A* 3i3h_A 3i3i_A 1pc9_A 2q2j_A 3cyl_A* 1qll_A* 1xxs_A* 3qnl_A* 2ok9_A* 3iq3_A* 2h8i_A* 3mlm_A* 1y4l_A* 1clp_A* ... Length = 122 Back     alignment and structure
>2aoz_A Myotoxin II, phospholipase A2 homolog; X-RAY diffration, myotoxicity, atropoides toxin; 2.08A {Atropoides nummifer} Length = 121 Back     alignment and structure
>1jlt_A Phospholipase A2 inhibitor; heterodimer complex, hydrolase, PLA2-activity; 1.40A {Vipera ammodytes ammodytes} SCOP: a.133.1.2 PDB: 1vpi_A 1aok_A 1q5t_A 1oqs_A 2h4c_A Length = 122 Back     alignment and structure
>1jia_A Phospholipase A2; agkistrodon haLys pallas; 2.13A {Gloydius halys} SCOP: a.133.1.2 PDB: 1b4w_A 1c1j_A* Length = 122 Back     alignment and structure
>1gp7_A Phospholipase A2; snake venom, KING cobra, cardiotoxic activity, myotoxic activity, pancreatic loop, hydrolase, lipid degradation, calcium; 2.6A {Ophiophagus hannah} SCOP: a.133.1.2 Length = 151 Back     alignment and structure
>3r0l_D Phospholipase A2 CB; crotoxin, presynaptic neurotoxin, snake venom, phospholipase heterodimer interface, hydrolase; 1.35A {Crotalus durissus terrificus} PDB: 2qog_B 2qog_A 1bjj_A 1a2a_A Length = 122 Back     alignment and structure
>1zlb_A Hypotensive phospholipase A2; Asp49-PLA2, toxin, snake venom, hydrolase; 0.97A {Bothrops jararacussu} SCOP: a.133.1.2 PDB: 1umv_X 1zl7_A 1z76_A* 1u73_A* 1vap_A 3r0l_A Length = 122 Back     alignment and structure
>1bun_A BETA2-bungarotoxin; hydrolase, presynaptic neurotoxin; 2.45A {Bungarus multicinctus} SCOP: a.133.1.2 Length = 120 Back     alignment and structure
>1m8r_A Phospholipase A2; phopholipase A2-metal cation complex, three alpha, two beta, hydrolase; 1.90A {Gloydius halys} SCOP: a.133.1.2 PDB: 1m8s_A 1bk9_A* 1psj_A 1ijl_A 1pp2_R Length = 124 Back     alignment and structure
>2h4c_B Phospholipase A2-II; non-inhibitor acidic PLA2, basic PLA2, heterodimer, hydrolase; 2.60A {Daboia russellii siamensis} Length = 122 Back     alignment and structure
>1gmz_A Phospholipase A2; hydrolase, neurotoxic; 2.4A {Bothrops pirajai} SCOP: a.133.1.2 Length = 122 Back     alignment and structure
>3vbz_A Phospholipase A2 homolog, taipoxin beta chain; phospholipase A2 fold, PLA2 fold, neurotoxin, binding; 1.76A {Oxyuranus scutellatus scutellatus} PDB: 3vc0_A Length = 118 Back     alignment and structure
>4e4c_A Phospholipase A2; hydrolase; HET: MES; 1.80A {Notechis scutatus scutatus} PDB: 1ae7_A* 2not_A Length = 119 Back     alignment and structure
>1jlt_B Phospholipase A2, vipoxin; heterodimer complex, hydrolase, PLA2-activity; 1.40A {Vipera ammodytes ammodytes} SCOP: a.133.1.2 PDB: 1rgb_A* 2i0u_E* 1aok_B 1oqs_B Length = 122 Back     alignment and structure
>2qhd_A Phospholipase A2; beta sheet, three helices, protein-ligand complex, hydrolase; HET: DAO; 1.95A {Echis carinatus} PDB: 2qhe_A 3bjw_A* Length = 122 Back     alignment and structure
>1g4i_A Phospholipase A2; lipid degradation, hydrolase; 0.97A {Bos taurus} SCOP: a.133.1.2 PDB: 1bvm_A 1fdk_A* 1bp2_A 1mkt_A 1mkv_A* 1une_A 2bpp_A 4bp2_A 2bp2_A 1kvy_A 1bpq_A 2zp3_A 1ceh_A 3bp2_A 2zp5_A 1kvx_A 1kvw_A 2zp4_A 1irb_A 2bax_A* ... Length = 123 Back     alignment and structure
>1m8t_A Phospholipase A2; twinned crystal, alpha, beta, hydrolase; 2.10A {Ophiophagus hannah} SCOP: a.133.1.2 Length = 119 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query157
1le6_A123 Group X secretory phospholipase A2; human phosphat 100.0
3jql_A119 Phospholipase A2 isoform 3; phospholipase A2, hexa 100.0
4e4c_A119 Phospholipase A2; hydrolase; HET: MES; 1.80A {Note 100.0
3vbz_A118 Phospholipase A2 homolog, taipoxin beta chain; pho 100.0
1g0z_A118 Phospholipase A2; toxin; 2.18A {Bungarus caeruleus 100.0
3u8i_A124 Phospholipase A2, membrane associated; secreted ph 100.0
3r0l_D122 Phospholipase A2 CB; crotoxin, presynaptic neuroto 100.0
1p7o_A124 Phospholipase A2, mipla4; pancreatic loop, HYDR; 2 100.0
1m8t_A119 Phospholipase A2; twinned crystal, alpha, beta, hy 100.0
1gp7_A151 Phospholipase A2; snake venom, KING cobra, cardiot 100.0
3dih_A122 Phospholipase A2 homolog, ammodytin L; phospholipa 100.0
4hg9_A122 Basic phospholipase A2 B; alpha-helix, glycerophos 100.0
1jlt_A122 Phospholipase A2 inhibitor; heterodimer complex, h 100.0
2g58_A121 Phospholipase A2 VRV-PL-VIIIA; phospholipase A2, d 100.0
1g4i_A123 Phospholipase A2; lipid degradation, hydrolase; 0. 100.0
2aoz_A121 Myotoxin II, phospholipase A2 homolog; X-RAY diffr 100.0
2qhd_A122 Phospholipase A2; beta sheet, three helices, prote 100.0
1oz6_A120 Phospholipase A2; enzyme, PLA2, hydrolase; 2.60A { 100.0
4h0q_A121 Phospholipase A2, acid 5; alpha-helix, glycerophos 100.0
2h4c_B122 Phospholipase A2-II; non-inhibitor acidic PLA2, ba 100.0
1bk9_A124 Phospholipase A2; hydrolase, platelet aggregation 100.0
1vip_A121 Phospholipase A2; hydrolase, anticoagulant; 2.20A 100.0
1bun_A120 BETA2-bungarotoxin; hydrolase, presynaptic neuroto 100.0
1jlt_B122 Phospholipase A2, vipoxin; heterodimer complex, hy 100.0
1zlb_A122 Hypotensive phospholipase A2; Asp49-PLA2, toxin, s 100.0
1gmz_A122 Phospholipase A2; hydrolase, neurotoxic; 2.4A {Bot 100.0
1mc2_A122 Acutohaemonlysin, phospholipase A2; YS49-phospholi 100.0
4h0s_A137 Svpla2 homolog, basic phospholipase A2 homolog CTS 100.0
2wg7_A130 PLA2, putative phospholipase A2; hydrolase, secret 99.75
3r0l_B35 Crotoxin chain B; crotoxin, presynaptic neurotoxin 98.64
1poc_A134 Phospholipase A2; hydrolase; HET: GEL; 2.00A {Apis 98.05
>1le6_A Group X secretory phospholipase A2; human phosphatidylcholine 2-acylhydrolase GX, GX SPLA2, SPLA2-X; 1.97A {Homo sapiens} SCOP: a.133.1.2 PDB: 1le7_A Back     alignment and structure
Probab=100.00  E-value=1.6e-39  Score=247.09  Aligned_cols=107  Identities=28%  Similarity=0.515  Sum_probs=99.6

Q ss_pred             cHHHHHHHHhhhcCCCcccccCCccccCCCCCCCCcCccCCccccccccchhhHHhhhhhcccCCc-ceeeEEeecCCcc
Q psy12202          6 SAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGV-VSYTTGAIQGPTV   84 (157)
Q Consensus         6 ~l~qf~~Mi~c~tg~~~l~Y~~YGCyCg~gG~G~PVD~iDrcC~~~~~~~Hd~CY~~~~~~~c~~~-~~Y~~~~~~~~~~   84 (157)
                      +|+||++||++++++++++|++||||||+||+|+|||+|||||+.     ||.||+++....|.|+ +.|+|++.++   
T Consensus         1 ~l~qf~~MI~~~~~~~~~~Y~~YGCyCg~gG~G~PvD~~DrcC~~-----hd~CY~~~~~~~C~p~~~~Y~~~~~~~---   72 (123)
T 1le6_A            1 GILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHG-----HDCCYTRAEEAGCSPKTERYSWQCVNQ---   72 (123)
T ss_dssp             CHHHHHHHHHHHSSSCGGGGSSBTTTBSSSCCSCCCSHHHHHHHH-----HHHHHHHHHHTTCCTTTCCCCEEEETT---
T ss_pred             CHHHHHHHHHHccCCCHHHHcccCCCcCCCCCCCcCCcHhHHHHH-----HHHHHHHHhhCCcccccCceEEEEECC---
Confidence            589999999999999999999999999999999999999999999     9999999987778887 8999999887   


Q ss_pred             cccCCCCCceeCCCCCCCCceeeccCCCCChhhhhhchhhHHHHHHhccCCCCCCcc
Q psy12202         85 LSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLRPYSCPKYKA  141 (157)
Q Consensus        85 ~s~~~~~~i~C~~~~~~~~~~~~~~~~~~~~C~~~lCeCDr~~A~C~~~~~~~~~~~  141 (157)
                             .|+|.              +..++|+++||||||+||+||++++|+.+..
T Consensus        73 -------~i~C~--------------~~~~~C~~~lCeCDk~~A~c~a~~~yn~~~~  108 (123)
T 1le6_A           73 -------SVLCG--------------PAENKCQELLCKCDQEIANCLAQTEYNLKYL  108 (123)
T ss_dssp             -------EEEEC--------------CCSSHHHHHHHHHHHHHHHHHHTCCCCGGGB
T ss_pred             -------cceEC--------------CCCChHHHHHccCcHHHHHHHHHCccCHHHc
Confidence                   89994              5779999999999999999999999988643
>3jql_A Phospholipase A2 isoform 3; phospholipase A2, hexapeptide, hydrolase, calcium, disulfide bond, lipid degradation, metal-binding, secreted; 1.20A {Naja sagittifera} SCOP: a.133.1.2 PDB: 1mf4_A 3jq5_A 1ln8_A 3jti_A 3nju_A* 3osh_A* 3q4y_A 1t37_A 1zm6_A 3gci_A 1yxl_A 1oxr_A 1td7_A* 1sz8_A 1a3d_A 1a3f_A 1psh_A 2osh_A 1poa_A 1pob_A* ... Back     alignment and structure
>4e4c_A Phospholipase A2; hydrolase; HET: MES; 1.80A {Notechis scutatus scutatus} PDB: 1ae7_A* 2not_A Back     alignment and structure
>3vbz_A Phospholipase A2 homolog, taipoxin beta chain; phospholipase A2 fold, PLA2 fold, neurotoxin, binding; 1.76A {Oxyuranus scutellatus scutellatus} PDB: 3vc0_A Back     alignment and structure
>1g0z_A Phospholipase A2; toxin; 2.18A {Bungarus caeruleus} SCOP: a.133.1.2 PDB: 1u4j_A* 1g2x_A 2osn_A 1dpy_A 1fe5_A 1tc8_A* 1po8_A* Back     alignment and structure
>3u8i_A Phospholipase A2, membrane associated; secreted phospholipase A2, hydrolase; HET: OLD; 1.10A {Homo sapiens} PDB: 3u8d_A* 1ayp_A 1db4_A* 1db5_A* 1dcy_A* 1j1a_A* 1bbc_A* 1kqu_A* 1pod_A 1poe_A* 3u8b_A 1kvo_A* 3u8h_A* 1n28_B 1n29_A Back     alignment and structure
>3r0l_D Phospholipase A2 CB; crotoxin, presynaptic neurotoxin, snake venom, phospholipase heterodimer interface, hydrolase; 1.35A {Crotalus durissus terrificus} SCOP: a.133.1.2 PDB: 2qog_B 2qog_A 1bjj_A 1a2a_A Back     alignment and structure
>1p7o_A Phospholipase A2, mipla4; pancreatic loop, HYDR; 2.30A {Micropechis ikaheka} SCOP: a.133.1.2 PDB: 1pwo_A 1ozy_A Back     alignment and structure
>1m8t_A Phospholipase A2; twinned crystal, alpha, beta, hydrolase; 2.10A {Ophiophagus hannah} SCOP: a.133.1.2 Back     alignment and structure
>1gp7_A Phospholipase A2; snake venom, KING cobra, cardiotoxic activity, myotoxic activity, pancreatic loop, hydrolase, lipid degradation, calcium; 2.6A {Ophiophagus hannah} SCOP: a.133.1.2 Back     alignment and structure
>3dih_A Phospholipase A2 homolog, ammodytin L; phospholipase A2 fold, myotoxin, secreted, toxin; 2.60A {Vipera ammodytes ammodytes} SCOP: a.133.1.2 PDB: 3ux7_A Back     alignment and structure
>4hg9_A Basic phospholipase A2 B; alpha-helix, glycerophospholipid, venom gland, hydrolase; HET: CIT G3P; 1.60A {Gloydius halys} PDB: 1jia_A 1b4w_A 1c1j_A* Back     alignment and structure
>1jlt_A Phospholipase A2 inhibitor; heterodimer complex, hydrolase, PLA2-activity; 1.40A {Vipera ammodytes ammodytes} SCOP: a.133.1.2 PDB: 1vpi_A 1aok_A 1q5t_A 1oqs_A 2h4c_A Back     alignment and structure
>2g58_A Phospholipase A2 VRV-PL-VIIIA; phospholipase A2, diars, hydrolase-hydrolase inhibitor compl; HET: PHQ; 0.98A {Daboia russellii pulchella} SCOP: a.133.1.2 PDB: 1cl5_A 1fb2_A* 1jq8_A 1jq9_A 1kpm_A* 1oxl_A* 1fv0_A* 1q7a_A 1skg_A* 1sv3_A* 1sv9_A* 1sxk_A* 1tdv_A 1tg1_A* 1tg4_A 1th6_A* 1sqz_A 1tjq_A* 1tk4_A 1tp2_A* ... Back     alignment and structure
>1g4i_A Phospholipase A2; lipid degradation, hydrolase; 0.97A {Bos taurus} SCOP: a.133.1.2 PDB: 1bvm_A 1fdk_A* 1bp2_A 1mkt_A 1mkv_A* 1une_A 2bpp_A 4bp2_A 2bp2_A 1kvy_A 1bpq_A 2zp3_A 1ceh_A 3bp2_A 2zp5_A 1kvx_A 1kvw_A 2zp4_A 1irb_A 2bax_A* ... Back     alignment and structure
>2aoz_A Myotoxin II, phospholipase A2 homolog; X-RAY diffration, myotoxicity, atropoides toxin; 2.08A {Atropoides nummifer} Back     alignment and structure
>2qhd_A Phospholipase A2; beta sheet, three helices, protein-ligand complex, hydrolase; HET: DAO; 1.95A {Echis carinatus} PDB: 2qhe_A 3bjw_A* Back     alignment and structure
>1oz6_A Phospholipase A2; enzyme, PLA2, hydrolase; 2.60A {Echis carinatus} SCOP: a.133.1.2 Back     alignment and structure
>4h0q_A Phospholipase A2, acid 5; alpha-helix, glycerophospholipid, venom gland, hydrolase; 1.60A {Viridovipera stejnegeri} PDB: 1m8r_A 1m8s_A Back     alignment and structure
>2h4c_B Phospholipase A2-II; non-inhibitor acidic PLA2, basic PLA2, heterodimer, hydrolase; 2.60A {Daboia russellii siamensis} Back     alignment and structure
>1bk9_A Phospholipase A2; hydrolase, platelet aggregation inhibitor, PBPB; HET: PBP; 2.00A {Gloydius halys} SCOP: a.133.1.2 PDB: 1psj_A 1ijl_A 1pp2_R Back     alignment and structure
>1vip_A Phospholipase A2; hydrolase, anticoagulant; 2.20A {Daboia russellii russellii} SCOP: a.133.1.2 Back     alignment and structure
>1bun_A BETA2-bungarotoxin; hydrolase, presynaptic neurotoxin; 2.45A {Bungarus multicinctus} SCOP: a.133.1.2 Back     alignment and structure
>1jlt_B Phospholipase A2, vipoxin; heterodimer complex, hydrolase, PLA2-activity; 1.40A {Vipera ammodytes ammodytes} SCOP: a.133.1.2 PDB: 1rgb_A* 2i0u_E* 1aok_B 1oqs_B Back     alignment and structure
>1zlb_A Hypotensive phospholipase A2; Asp49-PLA2, toxin, snake venom, hydrolase; 0.97A {Bothrops jararacussu} SCOP: a.133.1.2 PDB: 1umv_X 1zl7_A 1z76_A* 1u73_A* 1vap_A 3r0l_A Back     alignment and structure
>1gmz_A Phospholipase A2; hydrolase, neurotoxic; 2.4A {Bothrops pirajai} SCOP: a.133.1.2 Back     alignment and structure
>1mc2_A Acutohaemonlysin, phospholipase A2; YS49-phospholipase A2, snake venom, toxin; 0.85A {Deinagkistrodon acutus} SCOP: a.133.1.2 PDB: 1mg6_A 1pa0_A 3i03_A* 3hzd_A 3hzw_A* 3cxi_A* 3i3h_A 3i3i_A 1pc9_A 2q2j_A 3cyl_A* 1qll_A* 1xxs_A* 3qnl_A* 2ok9_A* 3iq3_A* 2h8i_A* 3mlm_A* 1y4l_A* 1clp_A* ... Back     alignment and structure
>4h0s_A Svpla2 homolog, basic phospholipase A2 homolog CTS-R6; alpha-helix, glycerophospholipid, venom gland, hydrolase; 1.55A {Viridovipera stejnegeri} Back     alignment and structure
>2wg7_A PLA2, putative phospholipase A2; hydrolase, secretory PLA2; 2.00A {Oryza sativa} PDB: 2wg9_A* 2wg8_B 2wg8_A Back     alignment and structure
>3r0l_B Crotoxin chain B; crotoxin, presynaptic neurotoxin, snake venom, phospholipase heterodimer interface, hydrolase; 1.35A {Crotalus durissus terrificus} Back     alignment and structure
>1poc_A Phospholipase A2; hydrolase; HET: GEL; 2.00A {Apis mellifera} SCOP: a.133.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 157
d1le6a_123 a.133.1.2 (A:) Phospholipase A2 {Human (Homo sapie 5e-13
d1sz8a_119 a.133.1.2 (A:) Snake phospholipase A2 {Andaman cob 1e-11
d2g58a1121 a.133.1.2 (A:1-133) Snake phospholipase A2 {Snake 2e-11
d1g0za_118 a.133.1.2 (A:) Snake phospholipase A2 {Indian krai 2e-11
d1n28a_124 a.133.1.2 (A:) Phospholipase A2 {Human (Homo sapie 2e-11
d1jltb_122 a.133.1.2 (B:) Snake phospholipase A2 {Sand viper 3e-11
d1ppaa_121 a.133.1.2 (A:) Snake phospholipase A2 {Eastern cot 9e-11
d1p7oa_124 a.133.1.2 (A:) Snake phospholipase A2 {Small-eye s 1e-10
d1m8ta_119 a.133.1.2 (A:) Snake phospholipase A2 {King cobra 1e-10
d1mc2a_122 a.133.1.2 (A:) Snake phospholipase A2 {Hundred-pac 2e-10
d1oz6a_120 a.133.1.2 (A:) Snake phospholipase A2 {Saw-scaled 2e-10
d1bjja_122 a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agki 2e-10
d1g4ia_123 a.133.1.2 (A:) Phospholipase A2 {Cow (Bos taurus), 3e-10
d1buna_120 a.133.1.2 (A:) Snake phospholipase A2 {Many-banded 6e-10
d1jlta_122 a.133.1.2 (A:) Snake phospholipase A2 {Sand viper 9e-10
d1vipa_121 a.133.1.2 (A:) Snake phospholipase A2 {Russell's v 9e-10
d1gmza_122 a.133.1.2 (A:) Snake phospholipase A2 {Snake (Both 9e-10
d1m8ra_124 a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agki 1e-09
d1jiaa_122 a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agki 1e-09
d1zlba1122 a.133.1.2 (A:1-122) Snake phospholipase A2 {Jarara 2e-09
d1ae7a_119 a.133.1.2 (A:) Snake phospholipase A2 {Mainland ti 6e-08
>d1le6a_ a.133.1.2 (A:) Phospholipase A2 {Human (Homo sapiens), SPLA2 [TaxId: 9606]} Length = 123 Back     information, alignment and structure

class: All alpha proteins
fold: Phospholipase A2, PLA2
superfamily: Phospholipase A2, PLA2
family: Vertebrate phospholipase A2
domain: Phospholipase A2
species: Human (Homo sapiens), SPLA2 [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 5e-13
 Identities = 27/128 (21%), Positives = 39/128 (30%), Gaps = 28/128 (21%)

Query: 8   VQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFI 67
           ++L   V C     P++Y  YGC+CG  G G P D ID     +      +         
Sbjct: 3   LELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKT 62

Query: 68  YSGVVSYTTGAIQGPTVLSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRF 127
                     ++               CGPA                 C   LC+CD+  
Sbjct: 63  ERYSWQCVNQSV--------------LCGPAE--------------NKCQELLCKCDQEI 94

Query: 128 SECLRPYS 135
           + CL    
Sbjct: 95  ANCLAQTE 102
>d1sz8a_ a.133.1.2 (A:) Snake phospholipase A2 {Andaman cobra (Naja sagittifera), acidic isoform 1 [TaxId: 195058]} Length = 119 Back     information, alignment and structure
>d2g58a1 a.133.1.2 (A:1-133) Snake phospholipase A2 {Snake (Daboia russellii pulchella), different isoforms [TaxId: 97228]} Length = 121 Back     information, alignment and structure
>d1g0za_ a.133.1.2 (A:) Snake phospholipase A2 {Indian krait (Bungarus caeruleus), different isoforms [TaxId: 132961]} Length = 118 Back     information, alignment and structure
>d1n28a_ a.133.1.2 (A:) Phospholipase A2 {Human (Homo sapiens), synovial fluid [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1jltb_ a.133.1.2 (B:) Snake phospholipase A2 {Sand viper (Vipera ammodytes meridionalis), vipoxin catalytic subunit [TaxId: 8704]} Length = 122 Back     information, alignment and structure
>d1ppaa_ a.133.1.2 (A:) Snake phospholipase A2 {Eastern cottonmouth snake (Agkistrodon piscivorus piscivorus) [TaxId: 8716]} Length = 121 Back     information, alignment and structure
>d1p7oa_ a.133.1.2 (A:) Snake phospholipase A2 {Small-eye snake (Micropechis ikaheka), different isoforms [TaxId: 66188]} Length = 124 Back     information, alignment and structure
>d1m8ta_ a.133.1.2 (A:) Snake phospholipase A2 {King cobra (Ophiophagus hannah), an acidic isoform [TaxId: 8665]} Length = 119 Back     information, alignment and structure
>d1mc2a_ a.133.1.2 (A:) Snake phospholipase A2 {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]} Length = 122 Back     information, alignment and structure
>d1oz6a_ a.133.1.2 (A:) Snake phospholipase A2 {Saw-scaled viper (Echis carinatus) [TaxId: 40353]} Length = 120 Back     information, alignment and structure
>d1bjja_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon halys) [TaxId: 8714]} Length = 122 Back     information, alignment and structure
>d1g4ia_ a.133.1.2 (A:) Phospholipase A2 {Cow (Bos taurus), pancreas [TaxId: 9913]} Length = 123 Back     information, alignment and structure
>d1buna_ a.133.1.2 (A:) Snake phospholipase A2 {Many-banded krait (Bungarus multicinctus), beta2-bungarotoxin [TaxId: 8616]} Length = 120 Back     information, alignment and structure
>d1jlta_ a.133.1.2 (A:) Snake phospholipase A2 {Sand viper (Vipera ammodytes meridionalis), vipoxin inhibitor [TaxId: 8704]} Length = 122 Back     information, alignment and structure
>d1vipa_ a.133.1.2 (A:) Snake phospholipase A2 {Russell's viper (Vipera russelli) [TaxId: 8707]} Length = 121 Back     information, alignment and structure
>d1gmza_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Bothrops pirajai), piratoxin III [TaxId: 113192]} Length = 122 Back     information, alignment and structure
>d1m8ra_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon halys) [TaxId: 8714]} Length = 124 Back     information, alignment and structure
>d1jiaa_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon halys) [TaxId: 8714]} Length = 122 Back     information, alignment and structure
>d1zlba1 a.133.1.2 (A:1-122) Snake phospholipase A2 {Jararacussu (Bothrops jararacussu) [TaxId: 8726]} Length = 122 Back     information, alignment and structure
>d1ae7a_ a.133.1.2 (A:) Snake phospholipase A2 {Mainland tiger snake (Notechis scutatus scutatus), notexin [TaxId: 8663]} Length = 119 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query157
d1le6a_123 Phospholipase A2 {Human (Homo sapiens), SPLA2 [Tax 100.0
d1g0za_118 Snake phospholipase A2 {Indian krait (Bungarus cae 100.0
d1ae7a_119 Snake phospholipase A2 {Mainland tiger snake (Note 100.0
d1buna_120 Snake phospholipase A2 {Many-banded krait (Bungaru 100.0
d1n28a_124 Phospholipase A2 {Human (Homo sapiens), synovial f 100.0
d1sz8a_119 Snake phospholipase A2 {Andaman cobra (Naja sagitt 100.0
d1m8ta_119 Snake phospholipase A2 {King cobra (Ophiophagus ha 100.0
d1p7oa_124 Snake phospholipase A2 {Small-eye snake (Micropech 100.0
d1g4ia_123 Phospholipase A2 {Cow (Bos taurus), pancreas [TaxI 100.0
d2g58a1121 Snake phospholipase A2 {Snake (Daboia russellii pu 100.0
d1gmza_122 Snake phospholipase A2 {Snake (Bothrops pirajai), 100.0
d1zlba1122 Snake phospholipase A2 {Jararacussu (Bothrops jara 100.0
d1oz6a_120 Snake phospholipase A2 {Saw-scaled viper (Echis ca 100.0
d1jltb_122 Snake phospholipase A2 {Sand viper (Vipera ammodyt 100.0
d1m8ra_124 Snake phospholipase A2 {Snake (Agkistrodon halys) 100.0
d1jiaa_122 Snake phospholipase A2 {Snake (Agkistrodon halys) 100.0
d1jlta_122 Snake phospholipase A2 {Sand viper (Vipera ammodyt 100.0
d1vipa_121 Snake phospholipase A2 {Russell's viper (Vipera ru 100.0
d1mc2a_122 Snake phospholipase A2 {Hundred-pace snake (Agkist 100.0
d1ppaa_121 Snake phospholipase A2 {Eastern cottonmouth snake 100.0
d1bjja_122 Snake phospholipase A2 {Snake (Agkistrodon halys) 100.0
d1poca_134 Phospholipase A2 {European honeybee (Apis mellifer 96.49
>d1le6a_ a.133.1.2 (A:) Phospholipase A2 {Human (Homo sapiens), SPLA2 [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Phospholipase A2, PLA2
superfamily: Phospholipase A2, PLA2
family: Vertebrate phospholipase A2
domain: Phospholipase A2
species: Human (Homo sapiens), SPLA2 [TaxId: 9606]

Probab=100.00  E-value=1.3e-40  Score=251.60  Aligned_cols=108  Identities=28%  Similarity=0.510  Sum_probs=99.9

Q ss_pred             cHHHHHHHHhhhcCCCcccccCCccccCCCCCCCCcCccCCccccccccchhhHHhhhhhcccCCc-ceeeEEeecCCcc
Q psy12202          6 SAVQLYSMVSCSTGCDPLSYKGYGCYCGFLGSGYPVDPIDRTSQLNMARDHDSGHEIYIIFIYSGV-VSYTTGAIQGPTV   84 (157)
Q Consensus         6 ~l~qf~~Mi~c~tg~~~l~Y~~YGCyCg~gG~G~PVD~iDrcC~~~~~~~Hd~CY~~~~~~~c~~~-~~Y~~~~~~~~~~   84 (157)
                      .||||++||+|+||++|++|++||||||+||+|.|||+|||||+.     ||.||+.+....|.++ .+|+|.+.++   
T Consensus         1 gllq~~~mi~c~tg~~~~~Y~~YGCyCG~gG~G~PvD~~D~CC~~-----HD~CY~~~~~~~c~~~~~~Y~~~c~~~---   72 (123)
T d1le6a_           1 GILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHG-----HDCCYTRAEEAGCSPKTERYSWQCVNQ---   72 (123)
T ss_dssp             CHHHHHHHHHHHSSSCGGGGSSBTTTBSSSCCSCCCSHHHHHHHH-----HHHHHHHHHHTTCCTTTCCCCEEEETT---
T ss_pred             ChhHHHHHHHHHcCCCHHHHCCcCcCCCCCCCCCCchhhHHHHhh-----chHHHHHHHhcCccCCccceeEEEECC---
Confidence            389999999999999999999999999999999999999999999     9999999987778887 8999999888   


Q ss_pred             cccCCCCCceeCCCCCCCCceeeccCCCCChhhhhhchhhHHHHHHhccCCCCCCccc
Q psy12202         85 LSFSNISSPTCGPASEDGPYVVSKASKRGKSCSHRLCECDRRFSECLRPYSCPKYKAV  142 (157)
Q Consensus        85 ~s~~~~~~i~C~~~~~~~~~~~~~~~~~~~~C~~~lCeCDr~~A~C~~~~~~~~~~~~  142 (157)
                             .|+|.              +..++|+++||||||+||+||++++|+.+...
T Consensus        73 -------~i~C~--------------~~~~~C~~~lCeCD~~~a~Cf~r~~YN~~y~~  109 (123)
T d1le6a_          73 -------SVLCG--------------PAENKCQELLCKCDQEIANCLAQTEYNLKYLF  109 (123)
T ss_dssp             -------EEEEC--------------CCSSHHHHHHHHHHHHHHHHHHTCCCCGGGBT
T ss_pred             -------EeeEC--------------CCCChHHHHhchhhHHHHHHHHhCccCHhhcC
Confidence                   99994              45679999999999999999999999886543
>d1g0za_ a.133.1.2 (A:) Snake phospholipase A2 {Indian krait (Bungarus caeruleus), different isoforms [TaxId: 132961]} Back     information, alignment and structure
>d1ae7a_ a.133.1.2 (A:) Snake phospholipase A2 {Mainland tiger snake (Notechis scutatus scutatus), notexin [TaxId: 8663]} Back     information, alignment and structure
>d1buna_ a.133.1.2 (A:) Snake phospholipase A2 {Many-banded krait (Bungarus multicinctus), beta2-bungarotoxin [TaxId: 8616]} Back     information, alignment and structure
>d1n28a_ a.133.1.2 (A:) Phospholipase A2 {Human (Homo sapiens), synovial fluid [TaxId: 9606]} Back     information, alignment and structure
>d1sz8a_ a.133.1.2 (A:) Snake phospholipase A2 {Andaman cobra (Naja sagittifera), acidic isoform 1 [TaxId: 195058]} Back     information, alignment and structure
>d1m8ta_ a.133.1.2 (A:) Snake phospholipase A2 {King cobra (Ophiophagus hannah), an acidic isoform [TaxId: 8665]} Back     information, alignment and structure
>d1p7oa_ a.133.1.2 (A:) Snake phospholipase A2 {Small-eye snake (Micropechis ikaheka), different isoforms [TaxId: 66188]} Back     information, alignment and structure
>d1g4ia_ a.133.1.2 (A:) Phospholipase A2 {Cow (Bos taurus), pancreas [TaxId: 9913]} Back     information, alignment and structure
>d2g58a1 a.133.1.2 (A:1-133) Snake phospholipase A2 {Snake (Daboia russellii pulchella), different isoforms [TaxId: 97228]} Back     information, alignment and structure
>d1gmza_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Bothrops pirajai), piratoxin III [TaxId: 113192]} Back     information, alignment and structure
>d1zlba1 a.133.1.2 (A:1-122) Snake phospholipase A2 {Jararacussu (Bothrops jararacussu) [TaxId: 8726]} Back     information, alignment and structure
>d1oz6a_ a.133.1.2 (A:) Snake phospholipase A2 {Saw-scaled viper (Echis carinatus) [TaxId: 40353]} Back     information, alignment and structure
>d1jltb_ a.133.1.2 (B:) Snake phospholipase A2 {Sand viper (Vipera ammodytes meridionalis), vipoxin catalytic subunit [TaxId: 8704]} Back     information, alignment and structure
>d1m8ra_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon halys) [TaxId: 8714]} Back     information, alignment and structure
>d1jiaa_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon halys) [TaxId: 8714]} Back     information, alignment and structure
>d1jlta_ a.133.1.2 (A:) Snake phospholipase A2 {Sand viper (Vipera ammodytes meridionalis), vipoxin inhibitor [TaxId: 8704]} Back     information, alignment and structure
>d1vipa_ a.133.1.2 (A:) Snake phospholipase A2 {Russell's viper (Vipera russelli) [TaxId: 8707]} Back     information, alignment and structure
>d1mc2a_ a.133.1.2 (A:) Snake phospholipase A2 {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]} Back     information, alignment and structure
>d1ppaa_ a.133.1.2 (A:) Snake phospholipase A2 {Eastern cottonmouth snake (Agkistrodon piscivorus piscivorus) [TaxId: 8716]} Back     information, alignment and structure
>d1bjja_ a.133.1.2 (A:) Snake phospholipase A2 {Snake (Agkistrodon halys) [TaxId: 8714]} Back     information, alignment and structure
>d1poca_ a.133.1.1 (A:) Phospholipase A2 {European honeybee (Apis mellifera) [TaxId: 7460]} Back     information, alignment and structure