Psyllid ID: psy12239

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-----

MDIGNGSKGVPKFREFYRKPRLDSEDGRDSPEVRYIYDDTDYHQNEISEIYSYTEQPEFQLNVKNFEDQMEAYGLIPCWQKLTPVEKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAQGCWGECQSDDEQYDTAVKNCIMLYKFGVFHAFIDLLNLEIDSSSNTTTVRKLAVSLHDSTDLRIILSVLCTIVEVVRHLEPNVRHSSVFEMLKNEISNPIGDELLAVKLFKMVTRFCSGATPHFPMKKVLILLWKVILVSLGGMKDLQELKKEKRKQNGLKVLDEDTIEIAKTMRPSSPPASAVDIIEAQNQKRNSRPLKRLALMKQSSLDEPAGAEFEPEEDYEDPQVMEVTMPRPPSPTPIVVEKKVLPWSPKVRQKELDMFLEAIRMKFVGFALRGDRDSLIGLPHPIHESVKVLKQHIYTSLSEVHIQKEEEINRSPMSLGEEIIGSSPTEMLYQKMLPNLPQYMIALLKILLAAAPTSKAKTDSINILSDVLPEEMPMTILQSMKLGTDVNRHKEIIVKAISSILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISAKSVIPILDFPACVIGDQPELTSESFEIGEGQTPHSWRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNDDWAYGNDLDARPWDFQAEECALRASVDRFNSRRYNSTCFDPDYESSDNSIGSVLSHPIELTEDFKQHYEIWLEREVFQLSINWDDLLEN

cccccccccccccHHHHHccccccccccccccEEEEEcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccHHHHHHHcccccccccccccHHHHHHccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHcc

cccccccccccccHHHHccccccccccccccccEEEEcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccccEEEEccccccccccccHHHHHHHcHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccHHcccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHcccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHccHcccHHHHHHHHHHHHHHHHccHccccHHcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHcc

mdigngskgvpkfrefyrkprldsedgrdspevryiyddtdyhqneiseiysyteqpefqlNVKNFEDQMEayglipcwqkltpveKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAqgcwgecqsddeQYDTAVKNCIMLYKFGVFHAFIDLLNleidsssntTTVRKLAVSLHDSTDLRIILSVLCTIVEVVRhlepnvrhSSVFEMLKNeisnpigdELLAVKLFKMVTrfcsgatphfpmKKVLILLWKVILVSLGGMKDLQELKKEKrkqnglkvldEDTIEIAktmrpssppasaVDIIEAQnqkrnsrplKRLALMKqssldepagaefepeedyedpqvmevtmprppsptpivvekkvlpwspkvRQKELDMFLEAIRMKFVGFAlrgdrdsliglphpihESVKVLKQHIYTSLSevhiqkeeeinrspmslgeeiigsspteMLYQKMLPNLPQYMIALLKILLAaaptskaktdsinilsdvlpeempMTILQSMKLGTDVNRHKEIIVKAISSILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISaksvipildfpacvigdqpeltsesfeigegqtphswRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNddwaygndldarpwdfqAEECALRASVdrfnsrrynstcfdpdyessdnsigsvlshpieltEDFKQHYEIWLEREVFQLSINWDDLLEN

mdigngskgvpkfrefyrkprldsedgrdspevRYIYDDTDYHQNEISEIYSYTEQPEFQLNVKNFEDQMEAYGLIPCWQKLTPVEKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAQGCWGECQSDDEQYDTAVKNCIMLYKFGVFHAFIDLLNLEIDSSSNTTTVRKLAVslhdstdlRIILSVLCTIVEVVRHLEPNVRHSSVFEMLKNEISNPIGDELLAVKLFKMVTRFCSgatphfpmKKVLILLWKVILVSLGGMKDLqelkkekrkqnglkvldeDTIEIAktmrpssppasaVDIIEaqnqkrnsrplKRLALMKQSSLDEPAGAEFEPEEDYEDPQVMEVTmprppsptpivvekkvlpwspkvRQKELDMFLEAIRMKFVGFALRGDRDSLIGLPHPIHESVKVLKQHIYTSLSevhiqkeeeinrspmslgEEIIGSSPTEMLYQKMLPNLPQYMIALLKILLAAAPTSKAKTDSINILSDVLPEEMPMTILQSMKLGTDVNRHKEIIVKAISSILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISAKSVIPILDFPACVIGDQPELTSESFEIGEGQTPHSWRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNDDWAYGNDLDARPWDFQAEECALRasvdrfnsrryNSTCFDPDYESSDNSIGSVLSHPIELTEDFKQHYEIWLEREVFQLSINWDDLLEN

MDIGNGSKGVPKFREFYRKPRLDSEDGRDSPEVRYIYDDTDYHQNEISEIYSYTEQPEFQLNVKNFEDQMEAYGLIPCWQKLTPVEKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAQGCWGECQSDDEQYDTAVKNCIMLYKFGVFHAFIDLLNLEIDSSSNTTTVRKLAVSLHDSTDLRIILSVLCTIVEVVRHLEPNVRHSSVFEMLKNEISNPIGDELLAVKLFKMVTRFCSGATPHFPMkkvlillwkvilvslGGMKDLQELKKEKRKQNGLKVLDEDTIEIAKTMRPSSPPASAVDIIEAQNQKRNSRPLKRLALMKQSSLDEPAGAEFEPEEDYEDPQVMEVTMPRPPSPTPIVVEKKVLPWSPKVRQKELDMFLEAIRMKFVGFALRGDRDSLIGLPHPIHESVKVLKQHIYTSLSEVHIQKEEEINRSPMSLGEEIIGSSPTEMLYQKMLPNLPQYMiallkillaaaPTSKAKTDSINILSDVLPEEMPMTILQSMKLGTDVNRHKEIIVKAissilllllKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISAKSVIPILDFPACVIGDQPELTSESFEIGEGQTPHSWRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNDDWAYGNDLDARPWDFQAEECALRASVDRFNSRRYNSTCFDPDYESSDNSIGSVLSHPIELTEDFKQHYEIWLEREVFQLSINWDDLLEN

********************************VRYIYDDTDYHQNEISEIYSYTEQPEFQLNVKNFEDQMEAYGLIPCWQKLTPVEKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAQGCWGECQSDDEQYDTAVKNCIMLYKFGVFHAFIDLLNLEIDSSSNTTTVRKLAVSLHDSTDLRIILSVLCTIVEVVRHLEPNVRHSSVFEMLKNEISNPIGDELLAVKLFKMVTRFCSGATPHFPMKKVLILLWKVILVSLGGMK*************************************************************************************************IVVEKKVLPWSPKVRQKELDMFLEAIRMKFVGFALRGDRDSLIGLPHPIHESVKVLKQHIYTSLSEVHI***********************EMLYQKMLPNLPQYMIALLKILLAAAPTSKAKTDSINILSDVLPEEMPMTILQSMKLGTDVNRHKEIIVKAISSILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISAKSVIPILDFPACVIGDQPELTSESFEIGEGQTPHSWRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNDDWAYGNDLDARPWDFQAEECALRASVDRFNSRRYNSTCFDPDY******IGSVLSHPIELTEDFKQHYEIWLEREVFQLSINWDDL***

**********************************YIYDDTDYHQNEISEIYSYTEQPEFQLNVKNFEDQMEAYGLIPCWQKLTPVEKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAQGCWGECQSDDEQYDTAVKNCIMLYKFGVFHAFIDLLNLEIDS**************HDSTDLRIILSVLCTIVEVVRHLEP*****SVFEMLKNEISNPIGDELLAVKLFKMVTRFCSGATPHFPMKKVLILLWKVILVSLGGMKDLQ**************LDEDTIEIAKTMRPSSPP********************************************************************************************VGFALRGDRDSLIGLPHPIHESVKVLKQHIYTSLSEVH************************EMLYQKMLPNLPQYMIALLKILLAAA******************************LGTDVNRHKEIIVKAISSILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISAKSVIPILDFPACVIG****************TPHSWRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNDDWAYGNDLDARPWDFQAEECALRASVDRFNSRRYNSTCFDP*********************DFKQHYEIWLEREVFQLSINWDDLLE*

********GVPKFREFYRKP********DSPEVRYIYDDTDYHQNEISEIYSYTEQPEFQLNVKNFEDQMEAYGLIPCWQKLTPVEKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAQGCWGECQSDDEQYDTAVKNCIMLYKFGVFHAFIDLLNLEIDSSSNTTTVRKLAVSLHDSTDLRIILSVLCTIVEVVRHLEPNVRHSSVFEMLKNEISNPIGDELLAVKLFKMVTRFCSGATPHFPMKKVLILLWKVILVSLGGMKDLQELKKEKRKQNGLKVLDEDTIEIAKT*********AVDIIEAQNQKRNSRPLKRLALMKQSS****************DPQVMEVTMPRPPSPTPIVVEKKVLPWSPKVRQKELDMFLEAIRMKFVGFALRGDRDSLIGLPHPIHESVKVLKQHIYTSLSEVHIQKEEEINRSPMSLGEEIIGSSPTEMLYQKMLPNLPQYMIALLKILLAAAPTSKAKTDSINILSDVLPEEMPMTILQSMKLGTDVNRHKEIIVKAISSILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISAKSVIPILDFPACVIGDQPELTSESFEIGEGQTPHSWRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNDDWAYGNDLDARPWDFQAEECALRASVDRFNSRRYNSTCFDPDYESSDNSIGSVLSHPIELTEDFKQHYEIWLEREVFQLSINWDDLLEN

*****************************SPEVRYIYDDTDYHQNEISEIYSYTEQPEFQLNVKNFEDQMEAYGLIPCWQKLTPVEKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAQGCWGECQSDDEQYDTAVKNCIMLYKFGVFHAFIDLLNLEIDSSSN******LAVSLHDSTDLRIILSVLCTIVEVVRHLEPNVRHSSVFEMLKNEISNPIGDELLAVKLFKMVTRFCSGATPHFPMKKVLILLWKVILVSLGGMKDLQELKKEKRKQNGLKVLDEDTIEIAKTMRPSSPPASAVDIIEAQN***********************************************SPTPIVVEKKVLPWSPKVRQKELDMFLEAIRMKFVGFALRGDRDSLIGLPHPIHESVKVLKQHIYTSLSEVHIQKEEEINRSPMSLGEEIIGSSPTEMLYQKMLPNLPQYMIALLKILLAAAPTSKAKTDSINILSDVLPEEMPMTILQSMKLGTDVNRHKEIIVKAISSILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISAKSVIPILDFPACVIGDQPELTSESFEIGEGQTPHSWRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNDDWAYGNDLDARPWDFQAEECALRASVDRFNSRRYNSTCFDPDYESSDNSIGSVLSHPIELTEDFKQHYEIWLEREVFQLSINWDDLLEN

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		785	2.2.26 [Sep-21-2011]
Q0P5J8		837	Striatin-interacting prot	yes	N/A	0.963	0.903	0.564	0.0
Q9GLZ5		837	Striatin-interacting prot	N/A	N/A	0.973	0.912	0.561	0.0
Q5VSL9		837	Striatin-interacting prot	yes	N/A	0.963	0.903	0.564	0.0
Q8C079		837	Striatin-interacting prot	yes	N/A	0.963	0.903	0.561	0.0
Q5R7S4		837	Striatin-interacting prot	yes	N/A	0.963	0.903	0.564	0.0
Q803T2		813	Striatin-interacting prot	yes	N/A	0.975	0.942	0.563	0.0
Q9ULQ0		834	Striatin-interacting prot	no	N/A	0.987	0.929	0.552	0.0
Q8C9H6		844	Striatin-interacting prot	no	N/A	0.979	0.911	0.549	0.0
Q54IL2		913	Striatin-interacting prot	yes	N/A	0.287	0.247	0.296	8e-20
O13665		817	Factor arrest protein 11	yes	N/A	0.267	0.257	0.270	8e-15

>sp\|Q0P5J8\|STRP1_BOVIN Striatin-interacting protein 1 OS=Bos taurus GN=STRIP1 PE=2 SV=1	Back alignment and function desciption

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/808 (56%), Positives = 576/808 (71%), Gaps = 52/808 (6%)

Query: 12  KFREFYRKPRLDSEDGRDSPEVRYIYDDTDYHQNEISEIYSYTEQPEFQLNVKNFEDQME 71
           K REF R  R DSE   +SP++ + Y DTD    E+SE+YSYTE PEF +N K FE+   
Sbjct: 47  KAREFNRNQRKDSEGYSESPDLEFEYADTDKWAAELSELYSYTEGPEFLMNRKCFEEDFR 106

Query: 72  AYGLIPCWQKLTPVEKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAQGCWGECQSDDEQY 131
            +     W +L   +  +   +LLD LEV+ +  R++ AR  LY+AQG +GEC S+ E  
Sbjct: 107 MHVTDKKWTELDTNQHRTHAMRLLDGLEVTAREKRLKVARAILYVAQGTFGECSSEAEVQ 166

Query: 132 DTAVKNCIMLYKFGVFHAFIDLLNLEIDSSSN-TTTVRKLAVSLHDSTDLRIILSVLCTI 190
                N  +L + G F+A ++LLN+EID+S+  ++ VRK A+SL DSTDLR++L+++  I
Sbjct: 167 SWMRYNTFLLLEVGTFNALVELLNMEIDNSAACSSAVRKPAISLADSTDLRVLLNIMYLI 226

Query: 191 VEVVRHLE---PNVRHSSVFEMLKNEISNPI-GDELLAVKLFKMVTRFCSGATPHFPMKK 246
           VE V H E         ++ +  + E+ +P+  +E  A+ LF MVT+FCSG  PHFPMKK
Sbjct: 227 VETV-HQECEGDKAEWRTMRQTFRAELGSPLYNNEPFAIMLFGMVTKFCSGHAPHFPMKK 285

Query: 247 VLILLWKVILVSLGGMKDLQELKKEKRKQNGLKVLDEDTIEIAKTMRPSSPPASAVDIIE 306
           VL+LLWK +L +LGG ++LQ +K EKR   GL  L ED+I++ + MR +SPPASA D+IE
Sbjct: 286 VLLLLWKTVLCTLGGFEELQSMKAEKRAILGLPPLPEDSIKVIRNMRAASPPASASDLIE 345

Query: 307 AQNQKRNSRPLKRLALMKQSSLD-----EP-------------------AGAEFEPEED- 341
            Q QKR  R  K  AL+KQ +LD     +P                    G  F  E D 
Sbjct: 346 -QQQKRGRREHK--ALIKQDNLDAFNERDPYKADDSREEEEENDDDNSLEGETFPLERDE 402

Query: 342 -----YEDPQVMEVTMPRPPSPTPIVVEKKVLPWSPKVRQKELDMFLEAIRMKFVGFALR 396
                 + PQ   +T P            K LPW+PKVR+K+++MFLE+ R KF+G+ L 
Sbjct: 403 VMPPPLQHPQTDRLTCP------------KGLPWAPKVREKDIEMFLESSRSKFIGYTLG 450

Query: 397 GDRDSLIGLPHPIHESVKVLKQHIYTSLSEVHIQKEEEINRSPMSLGEEIIGSSPTEMLY 456
            D ++++GLP PIHES+K LKQH YTS++EV  Q EEE  RSP+S GEE +   P E LY
Sbjct: 451 SDTNTVVGLPRPIHESIKTLKQHKYTSIAEVQAQMEEEYLRSPLSGGEEEVEQVPAETLY 510

Query: 457 QKMLPNLPQYMIALLKILLAAAPTSKAKTDSINILSDVLPEEMPMTILQSMKLGTDVNRH 516
           Q +LP+LPQYMIALLKILLAAAPTSKAKTDSINIL+DVLPEEMP T+LQSMKLG DVNRH
Sbjct: 511 QGLLPSLPQYMIALLKILLAAAPTSKAKTDSINILADVLPEEMPTTVLQSMKLGVDVNRH 570

Query: 517 KEIIVKAISSILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISAKSV 576
           KE+IVKAIS++LLLLLKHFKLNHVYQFE+M+QHLVFANCIPL+LKFFNQNI  YI+AK+ 
Sbjct: 571 KEVIVKAISAVLLLLLKHFKLNHVYQFEYMAQHLVFANCIPLILKFFNQNIMSYITAKNS 630

Query: 577 IPILDFPACVIGDQPELTSESFEIGEGQTPHSWRNLVSCINLLRILNKLTKWKHSRIMML 636
           I +LD+P CV+ + PELT+ES E G+      WRNL SCINLLRILNKLTKWKHSR MML
Sbjct: 631 ISVLDYPHCVVHELPELTAESLEAGDNNQ-FCWRNLFSCINLLRILNKLTKWKHSRTMML 689

Query: 637 VIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLND 696
           V+FKSAPILKR LKV+ AMMQLYVLKLLK+QTKYLGRQWRKSNMKT+SAIY KVRHRLND
Sbjct: 690 VVFKSAPILKRALKVKQAMMQLYVLKLLKVQTKYLGRQWRKSNMKTMSAIYQKVRHRLND 749

Query: 697 DWAYGNDLDARPWDFQAEECALRASVDRFNSRRYNSTCFDPDYESSDNSIGSVLSHPIEL 756
           DWAYGNDLDARPWDFQAEECALRA+++RFN+RRY+    +PD+   DN + SVL   ++L
Sbjct: 750 DWAYGNDLDARPWDFQAEECALRANIERFNARRYDRAHSNPDFLPVDNCLQSVLGQRVDL 809

Query: 757 TEDFKQHYEIWLEREVFQLSINWDDLLE 784
            EDF+ +Y++WLEREVF   I+W++LL+
Sbjct: 810 PEDFQMNYDLWLEREVFSKPISWEELLQ 837

Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the cortical actin filament dynamics and cell shape.
Bos taurus (taxid: 9913)

>sp\|Q9GLZ5\|STRP1_MACFA Striatin-interacting protein 1 OS=Macaca fascicularis GN=STRIP1 PE=2 SV=1	Back alignment and function description

>sp\|Q5VSL9\|STRP1_HUMAN Striatin-interacting protein 1 OS=Homo sapiens GN=STRIP1 PE=1 SV=1	Back alignment and function description

>sp\|Q8C079\|STRP1_MOUSE Striatin-interacting protein 1 OS=Mus musculus GN=Strip1 PE=1 SV=2	Back alignment and function description

>sp\|Q5R7S4\|STRP1_PONAB Striatin-interacting protein 1 OS=Pongo abelii GN=STRIP1 PE=2 SV=2	Back alignment and function description

>sp\|Q803T2\|STRP1_DANRE Striatin-interacting protein 1 homolog OS=Danio rerio GN=strip1 PE=1 SV=1	Back alignment and function description

>sp\|Q9ULQ0\|STRP2_HUMAN Striatin-interacting protein 2 OS=Homo sapiens GN=STRIP2 PE=2 SV=2	Back alignment and function description

>sp\|Q8C9H6\|STRP2_MOUSE Striatin-interacting proteins 2 OS=Mus musculus GN=Strip2 PE=1 SV=1	Back alignment and function description

>sp\|Q54IL2\|STRP_DICDI Striatin-interacting protein homolog OS=Dictyostelium discoideum GN=fam40 PE=3 SV=1	Back alignment and function description

>sp\|O13665\|FAR11_SCHPO Factor arrest protein 11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=far11 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		785
189233949		817	PREDICTED: similar to CG11526 CG11526-PA	0.992	0.953	0.670	0.0
270014779		840	hypothetical protein TcasGA2_TC010759 [T	0.966	0.903	0.675	0.0
332028495		826	Protein FAM40A [Acromyrmex echinatior]	0.988	0.939	0.655	0.0
307189491		828	Protein FAM40A [Camponotus floridanus]	0.993	0.942	0.652	0.0
383862583		817	PREDICTED: protein FAM40A-like [Megachil	0.988	0.949	0.622	0.0
322794250		806	hypothetical protein SINV_12685 [Solenop	0.959	0.934	0.667	0.0
345487982		795	PREDICTED: protein FAM40A-like [Nasonia	0.956	0.944	0.655	0.0
242010417		808	protein FAM40A, putative [Pediculus huma	0.992	0.964	0.629	0.0
157117085		829	hypothetical protein AaeL_AAEL007865 [Ae	0.973	0.921	0.603	0.0
350400766		821	PREDICTED: protein FAM40A-like [Bombus i	0.989	0.946	0.623	0.0

>gi\|189233949\|ref\|XP_001815164.1\| PREDICTED: similar to CG11526 CG11526-PA [Tribolium castaneum]	Back alignment and taxonomy information

 Score = 1036 bits (2679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/813 (67%), Positives = 643/813 (79%), Gaps = 34/813 (4%)

Query: 4   GNGSKGVPKFREFYRKPRLDSEDG-RDSPEVRYIYDDTDYHQNEISEIYSYTEQPEFQLN 62
           GNG +G+P+ RE  R+ R DS+ G  DSP++ +IYDDTD H NEI+E+YSYTEQPE  LN
Sbjct: 5   GNGKRGLPRLREIIRRQRQDSDGGGTDSPDLDFIYDDTDTHPNEIAELYSYTEQPELALN 64

Query: 63  VKNFEDQMEAYGLIPCWQKLTPVEKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAQGCWG 122
           VK FEDQME Y L P WQ+L+  ++ SV+ KLLDQLEVS+K +RMR+ARC LY+AQGCW 
Sbjct: 65  VKAFEDQMEQYNLPPSWQRLSLEQRKSVVMKLLDQLEVSSKPLRMRAARCILYIAQGCWA 124

Query: 123 ECQSDDEQYDTAVKNCIMLYKFGVFHAFIDLLNLEIDSSSNT-TTVRKLAVSLHDSTDLR 181
           E QSD EQ   A  N ++LY+ GVF AF DLLN+EI++S+     +RK+AVSL DS DLR
Sbjct: 125 EMQSDAEQQQWARVNVMLLYQLGVFSAFTDLLNIEIENSTAAHVAMRKIAVSLADSQDLR 184

Query: 182 IILSVLCTIVEVVRH--LEPNVRHSSVFEMLKNEISNPIGDELLAVKLFKMVTRFCSGAT 239
           +ILSVL TI EV+R+     +  + S  E   ++++N   DELL VKL  MVTRFCSGA 
Sbjct: 185 VILSVLYTITEVIRNEKYSGSTEYQSDVESFCSDLANSYDDELLIVKLLGMVTRFCSGAA 244

Query: 240 PHFPMKKVLILLWKVILVSLGGMKDLQELKKEKRKQNGLKVLDEDTIEIAKTMRPSSPPA 299
           PHFPMKKVL+LLWK+ILV+LGGM  L++LK EKR++ GL  LDEDT+EIAKTMR SSPPA
Sbjct: 245 PHFPMKKVLLLLWKLILVTLGGMTVLKDLKDEKREKAGLPRLDEDTMEIAKTMRASSPPA 304

Query: 300 SAVDIIEAQNQKRNSRPLKRLALMKQSSLD--EPAGAEFE-------------------- 337
           SA D++EAQNQKRN+RP +R  LMKQSSLD  E  G E +                    
Sbjct: 305 SASDLLEAQNQKRNTRPFRR-NLMKQSSLDDHESLGMELDATLVGGDNGDELGELSEYDD 363

Query: 338 --PEEDYEDPQVMEVTMPRPPSP---TPIVVEKKVLPWSPKVRQKELDMFLEAIRMKFVG 392
             P E+ E+ Q+      RP SP   + +VV +  LPW PKVRQK++D+FL+  R+KFVG
Sbjct: 364 RRPPENSENNQMYSNYQNRPTSPPLQSSLVVPRG-LPWKPKVRQKDIDLFLDTARLKFVG 422

Query: 393 FALRGDRDSLIGLPHPIHESVKVLKQHIYTSLSEVHIQKEEEINRSPMSLGEEIIGSSPT 452
           ++L+GDRDSL GLP PIHE VK LK+H+YTSL+E+ IQKEEEI R+P+S  E  I  +PT
Sbjct: 423 YSLQGDRDSLAGLPLPIHEGVKTLKEHVYTSLAELQIQKEEEIARNPLSTSEGEIEMTPT 482

Query: 453 EMLYQKMLPNLPQYMIALLKILLAAAPTSKAKTDSINILSDVLPEEMPMTILQSMKLGTD 512
           E+LYQ MLPNLPQYMIALLKILLAAAPTSKAKTDSINI++DVLPEEMPMT+LQSMKLG D
Sbjct: 483 EILYQAMLPNLPQYMIALLKILLAAAPTSKAKTDSINIMADVLPEEMPMTVLQSMKLGID 542

Query: 513 VNRHKEIIVKAISSILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYIS 572
           VNRHKEIIVKA+S+ILLLLLKHFKLNH+YQFEFMSQHLVFANCIPLVLKFFNQNI  Y+ 
Sbjct: 543 VNRHKEIIVKAVSAILLLLLKHFKLNHIYQFEFMSQHLVFANCIPLVLKFFNQNIMAYVG 602

Query: 573 AKSVIPILDFPACVIGDQPELTSESFEIGEGQTPHSWRNLVSCINLLRILNKLTKWKHSR 632
           AK+VIPILDFP+CVIGDQPELT+ES EIG+   P SWRN+ SCINLLRILNKLTKWKHSR
Sbjct: 603 AKNVIPILDFPSCVIGDQPELTAESLEIGDS-APFSWRNMFSCINLLRILNKLTKWKHSR 661

Query: 633 IMMLVIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRH 692
           IMMLV+FKSAPILKRTLKVRHAM QLYVLKLLKMQTKYLGRQWRKSNMKTISAIY KVRH
Sbjct: 662 IMMLVVFKSAPILKRTLKVRHAMTQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYQKVRH 721

Query: 693 RLNDDWAYGNDLDARPWDFQAEECALRASVDRFNSRRYNSTCFDPDYESSDNSIGSVLSH 752
           RLNDDWAYGNDLDARPWDFQAEECALRASVDRFN+RRY     D ++   DN + SVL  
Sbjct: 722 RLNDDWAYGNDLDARPWDFQAEECALRASVDRFNNRRYTQANQDSEFAPVDNCLNSVLGT 781

Query: 753 PIELTEDFKQHYEIWLEREVFQLSINWDDLLEN 785
             +L+E FKQHY++WLE+EV+  +I W++LL N
Sbjct: 782 TYDLSESFKQHYQLWLEQEVYGNTIEWEELLLN 814

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|270014779\|gb\|EFA11227.1\| hypothetical protein TcasGA2_TC010759 [Tribolium castaneum]	Back alignment and taxonomy information

>gi\|332028495\|gb\|EGI68535.1\| Protein FAM40A [Acromyrmex echinatior]	Back alignment and taxonomy information

>gi\|307189491\|gb\|EFN73868.1\| Protein FAM40A [Camponotus floridanus]	Back alignment and taxonomy information

>gi\|383862583\|ref\|XP_003706763.1\| PREDICTED: protein FAM40A-like [Megachile rotundata]	Back alignment and taxonomy information

>gi\|322794250\|gb\|EFZ17426.1\| hypothetical protein SINV_12685 [Solenopsis invicta]	Back alignment and taxonomy information

>gi\|345487982\|ref\|XP_001603859.2\| PREDICTED: protein FAM40A-like [Nasonia vitripennis]	Back alignment and taxonomy information

>gi\|242010417\|ref\|XP_002425964.1\| protein FAM40A, putative [Pediculus humanus corporis] gi\|212509955\|gb\|EEB13226.1\| protein FAM40A, putative [Pediculus humanus corporis]	Back alignment and taxonomy information

>gi\|157117085\|ref\|XP_001658692.1\| hypothetical protein AaeL_AAEL007865 [Aedes aegypti] gi\|108876183\|gb\|EAT40408.1\| AAEL007865-PA [Aedes aegypti]	Back alignment and taxonomy information

>gi\|350400766\|ref\|XP_003485951.1\| PREDICTED: protein FAM40A-like [Bombus impatiens]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		785
FB\|FBgn0035437		927	CG11526 [Drosophila melanogast	0.484	0.409	0.664	5.5e-222
MGI\|MGI:2444363		844	Strip2 "striatin interacting p	0.579	0.539	0.627	2.1e-215
UNIPROTKB\|E2RJF2		834	FAM40B "Uncharacterized protei	0.598	0.563	0.619	5.6e-215
UNIPROTKB\|E1BIK9		834	LOC529423 "Uncharacterized pro	0.579	0.545	0.629	1.5e-214
UNIPROTKB\|F1SMQ5		837	FAM40B "Uncharacterized protei	0.598	0.561	0.619	1.7e-213
UNIPROTKB\|Q9ULQ0		834	STRIP2 "Striatin-interacting p	0.598	0.563	0.619	2.1e-213
UNIPROTKB\|G3V8E2		837	Fam40a "Protein Fam40a" [Rattu	0.732	0.686	0.582	3e-179
MGI\|MGI:2443884		837	Strip1 "striatin interacting p	0.732	0.686	0.580	4.5e-178
UNIPROTKB\|Q5VSL9		837	STRIP1 "Striatin-interacting p	0.732	0.686	0.582	1.2e-177
UNIPROTKB\|E2R5G8		836	FAM40A "Uncharacterized protei	0.736	0.691	0.579	1.2e-177

FB\|FBgn0035437 CG11526 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

 Score = 1364 (485.2 bits), Expect = 5.5e-222, Sum P(3) = 5.5e-222
 Identities = 254/382 (66%), Positives = 307/382 (80%)

Query:   351 TMPRPPSPTPIVVEKKVLPWSPKVRQKELDMFLEAIRMKFVGFALRGDRDSLIGLPHPIH 410
             ++ +PP+  P V     LPW+PKVRQK++D FL+  R KF+G++L GD +SL GLP PIH
Sbjct:   427 SLTQPPAAVPPVQITARLPWTPKVRQKDIDQFLDISRNKFIGYSLIGDHESLAGLPQPIH 486

Query:   411 ESVKVLKQHIYTSLSEVHIQKEEEINRSPMSLGEEIIGSSPTEMLYQKMLPNLPQYMXXX 470
             E  K L++H+Y SL++V I+KEE+I R+P+S  E+ I  +P E+LYQ +LPNLPQYM   
Sbjct:   487 EGFKTLQRHMYMSLADVQIKKEEDIARNPISTHEDEIKLTPAEVLYQAILPNLPQYMIAL 546

Query:   471 XXXXXXXXPTSKAKTDSINILSDVLPEEMPMTILQSMKLGTDVNRHKEIIVKAXXXXXXX 530
                     PTSK+KT+SINI++DVLP +MP+T  QS KL  D+ RHKEIIVKA       
Sbjct:   547 LKVLLAASPTSKSKTESINIMADVLPRKMPLTATQSTKLTVDIGRHKEIIVKAVSAIILL 606

Query:   531 XXKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISAKSVIPILDFPACVIGDQ 590
               KHFK+NHVYQFEFMSQHLVFANCIPLVLKFFNQ I+ Y++ K+ IP+LDFP+CVIG+Q
Sbjct:   607 YLKHFKINHVYQFEFMSQHLVFANCIPLVLKFFNQTITEYVNTKNSIPLLDFPSCVIGEQ 666

Query:   591 PELTSESFEIGEGQTP--HSWRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRT 648
             P+L+ +SF  G   +   +SWRN+ SCINLLRILNKL KWKHSR+MMLV+FKSAPILK+T
Sbjct:   667 PDLSGDSFVYGGEMSDKSYSWRNVFSCINLLRILNKLIKWKHSRVMMLVVFKSAPILKKT 726

Query:   649 LKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNDDWAYGNDLDARP 708
             LKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKT+SAIYAKVRHRLNDDWA+GNDL++RP
Sbjct:   727 LKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTMSAIYAKVRHRLNDDWAFGNDLESRP 786

Query:   709 WDFQAEECALRASVDRFNSRRY 730
             WDFQAEEC LRA VDRFN RRY
Sbjct:   787 WDFQAEECTLRACVDRFNLRRY 808

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

MGI\|MGI:2444363 Strip2 "striatin interacting protein 2" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RJF2 FAM40B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BIK9 LOC529423 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SMQ5 FAM40B "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9ULQ0 STRIP2 "Striatin-interacting protein 2" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|G3V8E2 Fam40a "Protein Fam40a" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

MGI\|MGI:2443884 Strip1 "striatin interacting protein 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5VSL9 STRIP1 "Striatin-interacting protein 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E2R5G8 FAM40A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8C079	STRP1_MOUSE	No assigned EC number	0.5618	0.9630	0.9032	yes	N/A
Q803T2	STRP1_DANRE	No assigned EC number	0.5636	0.9757	0.9421	yes	N/A
Q5VSL9	STRP1_HUMAN	No assigned EC number	0.5643	0.9630	0.9032	yes	N/A
Q0P5J8	STRP1_BOVIN	No assigned EC number	0.5643	0.9630	0.9032	yes	N/A
Q8C9H6	STRP2_MOUSE	No assigned EC number	0.5490	0.9796	0.9111	no	N/A
Q5R7S4	STRP1_PONAB	No assigned EC number	0.5643	0.9630	0.9032	yes	N/A
Q9ULQ0	STRP2_HUMAN	No assigned EC number	0.5524	0.9872	0.9292	no	N/A
Q9GLZ5	STRP1_MACFA	No assigned EC number	0.5612	0.9732	0.9127	N/A	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		785
pfam11882		402	pfam11882, DUF3402, Domain of unknown function (DU	1e-152
pfam07923		293	pfam07923, N1221, N1221-like protein	6e-64

>gnl\|CDD\|221288 pfam11882, DUF3402, Domain of unknown function (DUF3402)	Back alignment and domain information

 Score =  448 bits (1155), Expect = e-152
 Identities = 182/381 (47%), Positives = 237/381 (62%), Gaps = 13/381 (3%)

Query: 360 PIVVEKKVLPWSPKVRQKELDMFLEAIRMKFVGFALRGDRDSLIGLPHPIHESVKVLKQH 419
           P  + +    +S KVR K     L   R KF+ +    D +SL+G P  I ESVK LK  
Sbjct: 1   PYSIIEAGELFSKKVRMKLATKQLWEEREKFMKYERGWDTESLVGDPLDISESVKELKLE 60

Query: 420 IYTSLSEVHIQKEEEINRSPMSLGEEIIGSSPTEMLYQKMLPNLPQYMIALLKILLAAAP 479
           +YTSL+E   +KEE    S  S  EEI      E  Y + LP+L   +I LLK +LA  P
Sbjct: 61  MYTSLAEDQPKKEEIERLSTDS--EEIPRLDRVESFYSEALPSLQSLVIVLLKTILANVP 118

Query: 480 --TSKAKTDSINILSDVLPEEMPMTILQSMKLGTDVNRHKEIIVKAISSILLLLLKHFKL 537
             TSKA  +SIN  +D LP+EMP T  +S++L  D+NRHKEI +KA+S+ILLLLLK FKL
Sbjct: 119 SLTSKANGESINGFADGLPDEMPAT-EESLQLQLDINRHKEITLKAVSAILLLLLKWFKL 177

Query: 538 NHVYQFEFMSQHLVFANCIPLVLKFFN-QNISMYISAKSVIPILDFPACVIG---DQPEL 593
           +HV +FE+++Q LV +N +PL+LKFF  QNI+  +++K+ IP L F +       + PEL
Sbjct: 178 SHVLKFEYLTQLLVDSNFLPLILKFFGLQNINRLVNSKNEIPNLSFFSECYLEARNPPEL 237

Query: 594 TSESFEIG----EGQTPHSWRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRTL 649
              SF  G    E  T  SWRN  S INLLRIL K+TK K  RI++LV +KS+ ILK+ L
Sbjct: 238 DELSFPYGPLPKEPITVFSWRNFFSLINLLRILQKVTKKKTHRILLLVQYKSSTILKKLL 297

Query: 650 KVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISAIYAKVRHRLNDDWAYGNDLDARPW 709
           KV    ++LYVLKLLK Q  Y GR+WR+SNM+ ISAIY   R  L DDW  G+D+DA   
Sbjct: 298 KVPQPDLRLYVLKLLKEQVPYCGRKWRQSNMRVISAIYLNCRLELRDDWLAGSDIDAEVE 357

Query: 710 DFQAEECALRASVDRFNSRRY 730
           D   +E ALRA +  +N RRY
Sbjct: 358 DAYPQEQALRALLQFYNLRRY 378

This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 350 to 473 amino acids in length. This domain is found associated with pfam07923. Length = 402

>gnl\|CDD\|219645 pfam07923, N1221, N1221-like protein	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		785
KOG3680\|consensus		830		100.0
PF11882		409	DUF3402: Domain of unknown function (DUF3402); Int	100.0
PF07923		293	N1221: N1221-like protein; InterPro: IPR012486 The	100.0
PF11882		409	DUF3402: Domain of unknown function (DUF3402); Int	96.47

>KOG3680\|consensus	Back alignment and domain information

Probab=100.00  E-value=2.1e-180  Score=1506.62  Aligned_cols=779  Identities=53%  Similarity=0.848  Sum_probs=726.2

Q ss_pred             CCCCCCCCcchhhhcCCCCCCCCCCCCCccceEeCCCCChhHHHhhhcccCchhhhhhhHHHHHHHHHhccCCCccccCC
Q psy12239          4 GNGSKGVPKFREFYRKPRLDSEDGRDSPEVRYIYDDTDYHQNEISEIYSYTEQPEFQLNVKNFEDQMEAYGLIPCWQKLT   83 (785)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~e~p~~~F~Y~D~d~~~~Ei~EwysY~e~~~~~ln~~~fe~~~~~~~~~~~W~~~~   83 (785)
                      +.+...+.|++|....+.+..++....|+++|.|+|.+-...|++|.|+|++..+|..|+++||++++++..+..|.+.+
T Consensus        11 ~s~~~~~~k~~d~~~s~~~~~e~~~s~~dl~~~~~d~~~~~~~~~e~~~~~~~~~f~~~~~~~e~d~r~~~~~q~wse~~   90 (830)
T KOG3680|consen   11 NSSFQRLLKYKDSFTSDKEPQEGSLSSPDLLFDLDDMLGGQLEMAELYFYTANREFSMNRRCFEEDFRHIDLPQNWSELS   90 (830)
T ss_pred             ccchhcchhhcccccccCccccccCCChHHHhhhhhhhhhhhhhcchhhhhhhhhHHHhhHHhhccceeeecCcchhhhh
Confidence            34455678889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhhcccChHHhHHHHHHHHHHhcccccccCChHHHHHHHHHhHHHHHhcCcHHHHHHHHhhhhccCCC
Q psy12239         84 PVEKNSVIAKLLDQLEVSNKVVRMRSARCFLYLAQGCWGECQSDDEQYDTAVKNCIMLYKFGVFHAFIDLLNLEIDSSSN  163 (785)
Q Consensus        84 ~~~r~~~i~~Ll~~le~~~~~~Rl~a~r~llYlaqG~~~e~~s~~~Ql~~i~~N~~lL~~~g~~~~l~~lL~~ei~~~~~  163 (785)
                      .+++|.+|+++++++|+++++.|++|+|+|+|+|||+||+|++.+++.+|+++||++|+|.|+|.+++++|+++|+++.+
T Consensus        91 ~~q~r~~i~~l~d~lE~~e~e~R~ksar~ILylaqG~~~e~~s~~e~~~~~r~N~~ll~e~gvf~sl~~LL~~ei~ss~~  170 (830)
T KOG3680|consen   91 VNQKRNNIMELLDRLESAERENRLKSARAILYLAQGTFGECDSEEEVRSSARENVFLLYELGVFYSLEDLLNEEIDSSDA  170 (830)
T ss_pred             hhhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHhccchhccCcchhhhhhhhhhhHHHHhcCcHHHHHHHHHHHhccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998776


Q ss_pred             ----ccchhccccCccchHHHHHHHHHHHhhhhhhccCCC--CcchhhhHHHHHHHhcCC-CCCchHHHHHHHHHHhhcC
Q psy12239        164 ----TTTVRKLAVSLHDSTDLRIILSVLCTIVEVVRHLEP--NVRHSSVFEMLKNEISNP-IGDELLAVKLFKMVTRFCS  236 (785)
Q Consensus       164 ----~~~~~~~~~sl~~s~el~~~LtilY~~Ve~~r~~~~--~~~~~~~r~~f~~eL~~p-~~~~~L~~~L~~~v~~lr~  236 (785)
                          .++.++++++++|+++++++|++||+|+++++...+  +..|.+.|.+|+.|+..| ++.++|+..+++|+.+||.
T Consensus       171 ~~~~~~~~rk~~~s~~D~s~~rvlLallY~~m~~~~~e~e~~~~~~r~~~~sf~~ev~~~l~~~e~~ai~l~~m~~~f~~  250 (830)
T KOG3680|consen  171 CSPGKSAVRKPNVSFADSSDLRVLLALLYIMMETFLDENEEDTKIWRENRLSFRPEVQEPLHNGEPLAISLFDMVTKFCS  250 (830)
T ss_pred             cCcchhhhcccccccccchhHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHhhhhhccccccCCeeEEEeeccchhhhc
Confidence                367799999999999999999999999999987653  788999999999999888 8889999999999999999


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHcCChhHHHHHHHHHHHhCCCCCCCchhHHHhhcccC--CCCCCChhhhHHHhhh-ccC
Q psy12239        237 GATPHFPMKKVLILLWKVILVSLGGMKDLQELKKEKRKQNGLKVLDEDTIEIAKTMRP--SSPPASAVDIIEAQNQ-KRN  313 (785)
Q Consensus       237 ~~a~~~P~kkvlLLlWK~lL~~fGG~~~L~~~K~~~r~~~gl~~~~ed~i~i~~~~~a--~sPp~~~~dL~~~~~~-~~~  313 (785)
                      |.++|||||||+||+||+.++++||+++|++.|+.+|...||++..+|+|+|+.+|+|  .+||.++.++.+.+-+ .+.
T Consensus       251 g~aphFp~KKillLiwKv~i~~lGg~e~Lq~~K~e~R~~lgL~~~~ed~itv~~~~~af~~~~~s~~~~l~~~~yp~p~~  330 (830)
T KOG3680|consen  251 GTAPHFPIKKILLLIWKVCILTLGGFEELQKLKAEKRWNLGLPPIIEDTITVAKSMRAFYASPPSSASNLAESQYPSPRK  330 (830)
T ss_pred             CccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhCChHHHHHHHhhcCCCccc
Confidence            9999999999999999999999999999999999999999999999999999999999  9999999999877632 223


Q ss_pred             CCccccccccCCCCCCCCCC-----CC--------C------CCCCCCCCCC-------ccccCCCCCCC-CCCccccCC
Q psy12239        314 SRPLKRLALMKQSSLDEPAG-----AE--------F------EPEEDYEDPQ-------VMEVTMPRPPS-PTPIVVEKK  366 (785)
Q Consensus       314 ~~p~~~~p~~~~~~l~~~~~-----~~--------~------~~~~s~~~~~-------~~~~~~~p~~p-psp~v~~~k  366 (785)
                      ++...+--.++|++.+.|..     .+        .      ++..++.+.+       ++++||++.|| ..++|+.+|
T Consensus       331 R~~s~~~~~~~~d~~D~f~~~~~~ss~~~~~e~~s~s~g~~~~~~~s~~~e~~~~~q~~p~~~tP~~~~P~~~~~v~~~~  410 (830)
T KOG3680|consen  331 RRGSLHQQAFKQDNTDEFNESDMPSSGLPKDENKSESLGQFLDGPRSLSGEPFNLEQIDPHIQTPALQPPSSPQPVTLPK  410 (830)
T ss_pred             cchhHHHHhhhccccccccccccccCCCCCccCcccccccccCCCCCcccCccchhccCCCCCCCCCCCCCCCccccccC
Confidence            33111125677877776531     00        0      1122222222       23567766666 345689999


Q ss_pred             CCCCCccchhHHHHHHHHHhhhhccccccC-CCCccccccCcchhHHHHHHHhccccChhhhhhhhhHhhhcCCCCCCcc
Q psy12239        367 VLPWSPKVRQKELDMFLEAIRMKFVGFALR-GDRDSLIGLPHPIHESVKVLKQHIYTSLSEVHIQKEEEINRSPMSLGEE  445 (785)
Q Consensus       367 ~~pw~~Kvr~~~~~~fl~~~r~~f~~~~~~-~~~~~~~~vP~sI~Ea~~il~~~~y~sls~~Ql~~E~e~~~~p~~~~e~  445 (785)
                      |+||+||+|.+|+++|++.+|++|+||.+. +|.++++|||.||+||.++|+.|+|+|++++|+|.|++++++|++++++
T Consensus       411 ~lPw~~k~r~~die~fl~~~R~k~l~~~l~~~d~~t~~glP~p~hea~ktL~~~ly~sla~~Q~~~eeel~~~~~s~~e~  490 (830)
T KOG3680|consen  411 GLPWASKVRQKDIEQFLESSRNKTLGYRLDLGDHETLVGLPRPIHEAFKTLKQHLYISLAEVQIKKEEELNRIPLSGGED  490 (830)
T ss_pred             CCCCCcchhhhhHHHHHhhhhhhhhhccccCCCCcccccCCcchHHHHHHhhhhheeehhHHhhhhHHHHhhcccccchh
Confidence            999999999999999999999999999998 8999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCcHHHHHHhhCCCchhHHHHHHHHHHHhCCCCcccCCCcccccCCCCCCCChhhhhhhccchhHHHHHHHHHHHHH
Q psy12239        446 IIGSSPTEMLYQKMLPNLPQYMIALLKILLAAAPTSKAKTDSINILSDVLPEEMPMTILQSMKLGTDVNRHKEIIVKAIS  525 (785)
Q Consensus       446 ~i~~~~vE~fY~~~Lp~L~s~vivLLk~lla~~~~~~~~~~~~n~~~d~~p~~~~~~~~~~~~~~ld~~R~kEI~~KAvs  525 (785)
                      +++.+++|.+|+.+||+|++++++|+|++++++|+++++++++|+++|++|++|+.+..++++.++||+|||||++||+|
T Consensus       491 ~i~~~p~e~LY~~~l~nl~qym~allkim~~~~Pt~Kar~~s~NvlidvL~~~M~~s~~~s~kl~idInRhKEiivKSlS  570 (830)
T KOG3680|consen  491 EIEETPAETLYQGILPNLSQYMIALLKIMVAASPTSKARTESINVLIDVLPEEMESSAIQSMKLGIDINRHKEIIVKSLS  570 (830)
T ss_pred             hhccchHHHHHHHhccCccHHHHHHHHHHHhcCcchhhhccccchhHHhccccchhhhhcccceeeeeccchhhHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHhhcchhHHHHHhhcccchhhhccCCCCCCCCCCccccCCCCCCCcccccCCCCCC
Q psy12239        526 SILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMYISAKSVIPILDFPACVIGDQPELTSESFEIGEGQT  605 (785)
Q Consensus       526 ~iLlLLLKwFK~sHilkFEylsqlL~dsN~~pliLK~fnq~i~~~v~~k~~~~~~~f~~c~~~~~p~~~~~~~~~~~~~~  605 (785)
                      |||||||||||+|||||||||||+|+++||||+|||||||++.+||++||+++..+|+.|.+++.|.++.++++.+-...
T Consensus       571 ailLllLKhFKLnHIyqFE~l~q~lvy~N~ipliLkffnq~~~e~i~nkn~i~v~~~p~C~~~e~p~lt~dsve~p~~~~  650 (830)
T KOG3680|consen  571 AILLLLLKHFKLNHIYQFEYLAQHLVYANCIPLILKFFNQNITEYITNKNEIPVLDYPECVISELPELTSDSVEAPGDSG  650 (830)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHhhhhhhhhcccccccccCCcccccCCccccccceeccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998743278


Q ss_pred             CCcchhHHHHHHHHHHHHHHhcccccceeeeecccchHHHHhhhhccchhhhHHHHHHHhhhccCcchhhhhcccchhhH
Q psy12239        606 PHSWRNLVSCINLLRILNKLTKWKHSRIMMLVIFKSAPILKRTLKVRHAMMQLYVLKLLKMQTKYLGRQWRKSNMKTISA  685 (785)
Q Consensus       606 ~fs~Rn~fS~in~LrIlqKitK~K~~R~~~Lv~~Kss~ILKk~Lkv~~~~l~ly~LKl~K~qvPy~gRKWRqsNM~vIS~  685 (785)
                      .|||||+|||||+||||+|+||||++|.+|||++||++||||+|||+|.+|||||||++|.||||+||||||+||++|||
T Consensus       651 ~~~wRNlfs~iNLLRiLnKl~K~K~~R~~mL~vfksapiLKr~lkv~~~~lqLYvLKllK~qt~yLGrqWrksNM~~iSa  730 (830)
T KOG3680|consen  651 QFSWRNLFSCINLLRILNKLTKWKNSRVKMLVVFKSAPILKRLLKVRHAMLQLYVLKLLKLQTPYLGRQWRKSNMKIISA  730 (830)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccccceeehhhhcchHHHHHHHhhhHHHHHHHHHHHHHHhhhhhhhhHhhhhHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcccCCCCCCccCCCCCCCCCccchHHHHHHHHHHHhhccccCCCCCCCCCccccc---ccccccccCcccCChhhHH
Q psy12239        686 IYAKVRHRLNDDWAYGNDLDARPWDFQAEECALRASVDRFNSRRYNSTCFDPDYESSD---NSIGSVLSHPIELTEDFKQ  762 (785)
Q Consensus       686 IYl~~R~~L~DdWl~g~Did~e~~d~~~~E~aLR~li~~yN~r~Y~~~~~~~~~~~~d---~~~~s~l~~~~~l~~~f~~  762 (785)
                      ||++|||+|+|||++|+|+++++||||+|||||||+|+|||.|||+..|.+.+....|   +|.+||+|+.+.|++.|+.
T Consensus       731 IY~~vrhrL~DdWafg~Dis~r~~D~Q~eE~~LrA~Ie~fn~RrY~~~~~~~~~~~~~a~~~~~~svlG~~~~l~eyf~~  810 (830)
T KOG3680|consen  731 IYLKVRHRLTDDWAFGNDISARPWDAQAEECALRALIEFFNSRRYDRAMESLYQFVIDAEMNCLQSVLGQRLSLPEYFHR  810 (830)
T ss_pred             HHHHHhhhcccccccccCCCCCcchhhHHHHHHHHHHHHHHHhhcchhcccccccchHHHHhhHHhhhccccchhhhhhh
Confidence            9999999999999999999999999999999999999999999999999888777776   9999999999999999999


Q ss_pred             HHHHHHHhhhccCCCChhhh
Q psy12239        763 HYEIWLEREVFQLSINWDDL  782 (785)
Q Consensus       763 ~ye~wl~~ev~~~~~~w~~l  782 (785)
                      ||+.|||+|||+.+|+||.|
T Consensus       811 ny~~wle~ev~n~e~ew~~l  830 (830)
T KOG3680|consen  811 NYESWLEREVFNKEIEWDAL  830 (830)
T ss_pred             hHHHHHHHHHhcccchhhhC
Confidence            99999999999999999975

>PF11882 DUF3402: Domain of unknown function (DUF3402); InterPro: IPR021819 This domain is functionally uncharacterised	Back alignment and domain information

>PF07923 N1221: N1221-like protein; InterPro: IPR012486 The sequences featured in this family are similar to a hypothetical protein product of ORF N1221 in the CPT1-SPC98 intergenic region of the yeast genome (P53917 from SWISSPROT)	Back alignment and domain information

>PF11882 DUF3402: Domain of unknown function (DUF3402); InterPro: IPR021819 This domain is functionally uncharacterised	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		785
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-11

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 78.4 bits (192), Expect = 6e-15
 Identities = 95/588 (16%), Positives = 178/588 (30%), Gaps = 161/588 (27%)

Query: 263 KDLQELKKEKRKQNGLKVLDEDTIEIAKTMRPSSPPASAVDIIEAQNQKRNSRPLKRLAL 322
           KD+  + ++          + D  ++    +          II +++    +  L    L
Sbjct: 19  KDILSVFEDAFVD------NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL 72

Query: 323 MKQSSLDEPAGAEFEPEEDYEDPQVMEVTMPRPPSPTPIVVEKKVLPWSPKVRQKELD-- 380
            KQ  + +    E     +Y    +M                    P   + RQ  +   
Sbjct: 73  SKQEEMVQKFVEEVL-RINY--KFLMS-------------------PIKTEQRQPSMMTR 110

Query: 381 MFLEAIRMKFVGFALRGDRDSLIGLPHPIHESVKVLKQHIY------------------T 422
           M++E  R +     L  D            +    L+Q +                   T
Sbjct: 111 MYIEQ-RDR-----LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT 164

Query: 423 SLSEVHIQKEEEINRSP-----MSLGEEIIGSSPTEM---LYQKMLPNLPQY-------- 466
            ++       +   +       ++L       +  EM   L  ++ PN            
Sbjct: 165 WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK 224

Query: 467 -----MIALLKILLAAAPTSKAKTDSINILSDVLPEEMPMTILQSMKLG------TDVNR 515
                + A L+ LL     SK   + + +L +V   +       +  L       T   R
Sbjct: 225 LRIHSIQAELRRLLK----SKPYENCLLVLLNVQNAK----AWNAFNLSCKILLTT---R 273

Query: 516 HKEIIVKAISSILLLLLKHFKLNHVYQFEFMSQHLVFANCIPLVLKFFNQNISMY-ISAK 574
            K++       +      H  L+H       S  L       L+LK+ +           
Sbjct: 274 FKQVT----DFLSAATTTHISLDH------HSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323

Query: 575 SVIPILDFPACVIGDQPELTSESFEIGEGQTPHSWRNL--VSCINLLRI----LNKLTKW 628
           +  P       +I        ES   G      +W N   V+C  L  I    LN L   
Sbjct: 324 TTNPRR---LSIIA-------ESIRDG----LATWDNWKHVNCDKLTTIIESSLNVLEPA 369

Query: 629 KHSRI-MMLVIF-KSAPILKRTLKVRHAMMQLYVLKLL--KMQTKYLGRQWRKSNMKTIS 684
           ++ ++   L +F  SA I    L +    +    + ++  K+    L  +  K +  +I 
Sbjct: 370 EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429

Query: 685 AIYAKVRHRLNDDWAYGNDLDARPWDFQAEECALRAS-VDRFNSRRYNSTCFDPDYES-- 741
           +IY +++ +L +++                  AL  S VD +N  +     FD D     
Sbjct: 430 SIYLELKVKLENEY------------------ALHRSIVDHYNIPK----TFDSDDLIPP 467

Query: 742 -SDNSIGSVLSH---PIELTEDFKQHYEI-----WLEREVFQLSINWD 780
             D    S + H    IE  E       +     +LE+++   S  W+
Sbjct: 468 YLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWN 515

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00