Psyllid ID: psy12258

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
Protein Sequence
MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYLTVTGSQTGAPIKKEPKQECNGDYWSYES
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHHccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccEccccHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mcdtcgksffsstaLKVHNrvhlglkpygcevcgrhfrqwgdlkyhkaslhsdvkafqceycgkdfarKYSLVVHRRihtgernyqcefchkafrassylqnhrrihtgekphfcpvcnkMFRVRSDMKRHLNTHNVDARQYLTvtgsqtgapikkepkqecngdywsyes
Flexible Loop (DISEMBL)
mcdtcgksffsstalkvhnRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIhtgekphfcpvCNKMFRVRSDMKRHLNthnvdarqyltvtgsqtgapikkepkqecngdywsyes
Low Complexity Region (SEG)
MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYLTVTGSQTGAPIKKEPKQECNGDYWSYES
Disordered region (IsUnstruct)
*****GKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYLTV**************************
Disordered Region (DISOPRED)
MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYLTVTGSQTGAPIKKEPKQECNGD**SY**
Disordered Region (DISEMBL)
MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYLTVTGSQTGAPIKKEPKQECNGDYWSYES
Disordered Region (DISPRO)
MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYLTVTGSQTGAPIKKEPKQECNG*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYLTVTGSQTGAPIKKEPKQECNGDYWSYES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	171	2.2.26 [Sep-21-2011]
Q9UK10	706	Zinc finger protein 225 O	yes	N/A	0.777	0.188	0.514	7e-33
Q8NDQ6	660	Zinc finger protein 540 O	no	N/A	0.789	0.204	0.492	2e-32
Q5R5S6	660	Zinc finger protein 540 O	no	N/A	0.789	0.204	0.492	2e-32
Q8IWY8	852	Zinc finger and SCAN doma	no	N/A	0.783	0.157	0.488	2e-31
Q8NB50	900	Zinc finger protein 62 ho	no	N/A	0.777	0.147	0.5	3e-31
Q12901	538	Zinc finger protein 155 O	no	N/A	0.783	0.249	0.503	4e-31
P85977	480	Zinc finger protein (Frag	N/A	N/A	0.795	0.283	0.489	7e-31
Q14591	655	Zinc finger protein 271 O	no	N/A	0.777	0.203	0.485	7e-31
A6NN14	1173	Zinc finger protein 729 O	no	N/A	0.783	0.114	0.503	7e-31
A8MTY0	619	Putative zinc finger prot	no	N/A	0.777	0.214	0.485	8e-31

>sp|Q9UK10|ZN225_HUMAN Zinc finger protein 225 OS=Homo sapiens GN=ZNF225 PE=2 SV=2

 Score =  139 bits (351), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/134 (51%), Positives = 91/134 (67%), Gaps = 1/134 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           CD CGKSF  S+AL++H RVH+G K Y C+VCG+ F Q   L+ H+  +H+  K F+CE 
Sbjct: 178 CDECGKSFCYSSALRIHQRVHMGEKLYNCDVCGKEFNQSSHLQIHQ-RIHTGEKPFKCEQ 236

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F+R+  L VHR++HTG + + CE C KAF   S LQ H+RIHTGEKP  C +C K 
Sbjct: 237 CGKGFSRRSGLYVHRKLHTGVKPHICEKCGKAFIHDSQLQEHQRIHTGEKPFKCDICCKS 296

Query: 122 FRVRSDMKRHLNTH 135
           FR R+++ RH   H
Sbjct: 297 FRSRANLNRHSMVH 310

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q8NDQ6|ZN540_HUMAN Zinc finger protein 540 OS=Homo sapiens GN=ZNF540 PE=1 SV=1

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/136 (49%), Positives = 91/136 (66%), Gaps = 1/136 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C  CGK+F     LK H ++H GLKPY C+ CG+ F + G    H+  +H+ VK ++C+ 
Sbjct: 525 CKECGKAFIRRGNLKEHLKIHSGLKPYDCKECGKSFSRRGQFTEHQ-KIHTGVKPYKCKE 583

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F+R   L +H+RIHTGE+ Y+C+ C KAFR +S+L  H+RIHTGEKP+ C VC K 
Sbjct: 584 CGKAFSRSVDLRIHQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKA 643

Query: 122 FRVRSDMKRHLNTHNV 137
           FR  S + +H  THNV
Sbjct: 644 FRQYSHLYQHQKTHNV 659

May act as a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|Q5R5S6|ZN540_PONAB Zinc finger protein 540 OS=Pongo abelii GN=ZNF540 PE=2 SV=1

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/136 (49%), Positives = 91/136 (66%), Gaps = 1/136 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C  CGK+F     LK H ++H GLKPY C+ CG+ F + G    H+  +H+ VK ++C+ 
Sbjct: 525 CKECGKAFIRRGNLKEHLKIHSGLKPYDCKECGKSFSRRGQFTEHQ-KIHTGVKPYKCKE 583

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F+R   L +H+RIHTGE+ Y+C+ C KAFR +S+L  H+RIHTGEKP+ C VC K 
Sbjct: 584 CGKAFSRSVDLRIHQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKA 643

Query: 122 FRVRSDMKRHLNTHNV 137
           FR  S + +H  THNV
Sbjct: 644 FRQYSHLYQHQKTHNV 659

May act as a transcriptional repressor.

Pongo abelii (taxid: 9601)

>sp|Q8IWY8|ZSC29_HUMAN Zinc finger and SCAN domain-containing protein 29 OS=Homo sapiens GN=ZSCAN29 PE=1 SV=2

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/135 (48%), Positives = 83/135 (61%), Gaps = 1/135 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C  CGKSF  S  L  H R+H G KPY C  CG+ FR   +   H+  +H+  K +QC  
Sbjct: 680 CADCGKSFSRSARLIRHRRIHTGEKPYKCLDCGKSFRDSSNFITHR-RIHTGEKPYQCGE 738

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F +  SL++H+R HTGE+ YQCE C K+F  SS+   HRRIHTGE+PH CP C K 
Sbjct: 739 CGKCFNQSSSLIIHQRTHTGEKPYQCEECGKSFNNSSHFSAHRRIHTGERPHVCPDCGKS 798

Query: 122 FRVRSDMKRHLNTHN 136
           F   SD++ H  TH 
Sbjct: 799 FSKSSDLRAHHRTHT 813

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8NB50|ZFP62_HUMAN Zinc finger protein 62 homolog OS=Homo sapiens GN=ZFP62 PE=2 SV=3

 Score =  134 bits (337), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/134 (50%), Positives = 86/134 (64%), Gaps = 1/134 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           CD CGK+F +S+ L VH R+H G KPY C+VCG+ F     L  HK S+H   KA +C+ 
Sbjct: 367 CDECGKAFRNSSGLIVHKRIHTGEKPYKCDVCGKAFSYSSGLAVHK-SIHPGKKAHECKE 425

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F+    L+ HR IHTGER Y C+ C K FR ++ L+ HRR+HTGEKP+ C VC K 
Sbjct: 426 CGKSFSYNSLLLQHRTIHTGERPYVCDVCGKTFRNNAGLKVHRRLHTGEKPYKCDVCGKA 485

Query: 122 FRVRSDMKRHLNTH 135
           +  RS +K H   H
Sbjct: 486 YISRSSLKNHKGIH 499

May play a role in differentiating skeletal muscle.

Homo sapiens (taxid: 9606)

>sp|Q12901|ZN155_HUMAN Zinc finger protein 155 OS=Homo sapiens GN=ZNF155 PE=2 SV=4

 Score =  134 bits (336), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/135 (50%), Positives = 88/135 (65%), Gaps = 1/135 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           CD CGKS    +AL VH RVH+G K + C+VCG+ F Q   L+ H+  +H+  K F+CE 
Sbjct: 178 CDECGKSICYISALHVHQRVHVGEKLFMCDVCGKEFSQSSHLQTHQ-RVHTGEKPFKCEQ 236

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F+R+ +L VHR++HTGE+ Y CE C KAF   S L+ H+RIHTGEKP  C +C K 
Sbjct: 237 CGKGFSRRSALNVHRKLHTGEKPYICEACGKAFIHDSQLKEHKRIHTGEKPFKCDICGKT 296

Query: 122 FRVRSDMKRHLNTHN 136
           F  RS +K H   H 
Sbjct: 297 FYFRSRLKSHSMVHT 311

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P85977|ZNFP_CHLAE Zinc finger protein (Fragment) OS=Chlorocebus aethiops PE=1 SV=1

 Score =  133 bits (334), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 67/137 (48%), Positives = 89/137 (64%), Gaps = 1/137 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           CD CGK+F   +AL++H RVH+G K Y C+VCG+ F Q   L+ H+  +H+  K F+C  
Sbjct: 178 CDECGKNFCYISALRIHQRVHMGEKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEKPFKCVE 236

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F+R+ +L VH ++HTGE+ Y CE C KAF   S LQ H+RIHTGEKP  C +C K 
Sbjct: 237 CGKGFSRRSALNVHHKLHTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPFKCDICGKS 296

Query: 122 FRVRSDMKRHLNTHNVD 138
           F  RS + RH   H  +
Sbjct: 297 FCGRSRLNRHSMVHTAE 313

May be involved in transcriptional regulation.

Chlorocebus aethiops (taxid: 9534)

>sp|Q14591|ZN271_HUMAN Zinc finger protein 271 OS=Homo sapiens GN=ZNF271 PE=2 SV=4

 Score =  133 bits (334), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/134 (48%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           CD CGK+F  S+ L +H R+H G KPY C  C + F Q  DL  H+  +H+  K ++C  
Sbjct: 232 CDVCGKAFSQSSDLILHQRIHTGEKPYPCNQCSKSFSQNSDLIKHRR-IHTGEKPYKCNE 290

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F +   L++H+RIHTGE+ Y C+ C K F   S L NH+RIHTGEKP+ C  CNKM
Sbjct: 291 CGKAFNQSSVLILHQRIHTGEKPYPCDQCSKTFSRLSDLINHQRIHTGEKPYPCNQCNKM 350

Query: 122 FRVRSDMKRHLNTH 135
           F  RSD+ +H   H
Sbjct: 351 FSRRSDLVKHHRIH 364

May be involved in transcriptional regulation. Plays a role in the EBV-mediated transformation process.

Homo sapiens (taxid: 9606)

>sp|A6NN14|ZN729_HUMAN Zinc finger protein 729 OS=Homo sapiens GN=ZNF729 PE=2 SV=3

 Score =  132 bits (333), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 68/135 (50%), Positives = 87/135 (64%), Gaps = 1/135 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C+ CGK+F  S+ L VH  VH G KPY CE CG+ F Q+  LK HK  +H+  K ++CE 
Sbjct: 378 CEECGKAFKWSSKLTVHKVVHTGEKPYKCEECGKAFSQFSTLKKHKI-IHTGKKPYKCEE 436

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F    +L+ H+ IHTGE+ Y+CE C KAFR SS+L  H+ IHTGEKP+ C  C K 
Sbjct: 437 CGKAFNSSSTLMKHKIIHTGEKPYKCEECGKAFRQSSHLTRHKAIHTGEKPYKCEECGKA 496

Query: 122 FRVRSDMKRHLNTHN 136
           F   SD++RH   H 
Sbjct: 497 FNHFSDLRRHKIIHT 511

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A8MTY0|ZN724_HUMAN Putative zinc finger protein 724 OS=Homo sapiens GN=ZNF724P PE=5 SV=3

 Score =  132 bits (333), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 65/134 (48%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C+ CGK+F +S+ L  H R+H G KPY CE CG+ F Q+  L  HK  +H+  K ++C+ 
Sbjct: 396 CEECGKAFNTSSHLTTHKRIHTGEKPYKCEECGKAFNQFSQLTTHKI-IHTGEKPYKCKE 454

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F R  +L  HR IHTGE+ Y+CE C KAF  SS+L  H++IHTGEKP+ C  C K 
Sbjct: 455 CGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFNLSSHLTTHKKIHTGEKPYKCKECGKA 514

Query: 122 FRVRSDMKRHLNTH 135
           F   S + RH   H
Sbjct: 515 FNQSSTLARHKIIH 528

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
383853992	649	PREDICTED: zinc finger protein 195-like	0.789	0.208	0.777	3e-61
350411473	647	PREDICTED: zinc finger protein 45-like [	0.789	0.208	0.770	9e-61
380020763	644	PREDICTED: zinc finger protein 227-like	0.789	0.209	0.770	9e-61
340729771	647	PREDICTED: zinc finger protein 45-like [	0.789	0.208	0.770	9e-61
328787424	646	PREDICTED: zinc finger protein 227-like	0.789	0.208	0.770	9e-61
242009920	900	zinc finger protein, putative [Pediculus	0.918	0.174	0.670	3e-60
270005714	779	hypothetical protein TcasGA2_TC007815 [T	0.730	0.160	0.777	7e-59
91080335	696	PREDICTED: similar to AGAP010009-PA [Tri	0.730	0.179	0.777	9e-59
332016289	642	Zinc finger protein 192 [Acromyrmex echi	0.789	0.210	0.748	9e-59
328722486	756	PREDICTED: zinc finger protein 611-like	0.994	0.224	0.634	1e-57

>gi|383853992|ref|XP_003702506.1| PREDICTED: zinc finger protein 195-like [Megachile rotundata]

 Score =  239 bits (610), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 105/135 (77%), Positives = 119/135 (88%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C+ CGKSFF+ +ALKVH R+H G KPY CE CGRHFRQWGDLKYH  S+HS+ K +QCEY
Sbjct: 415 CEVCGKSFFAPSALKVHKRLHSGDKPYKCEECGRHFRQWGDLKYHSTSIHSEQKQYQCEY 474

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGKDFARKYSL+VHRRIHTGE+NY+CEFC+K FRASSYLQNHRRIHTGEKPH C VC K 
Sbjct: 475 CGKDFARKYSLIVHRRIHTGEKNYRCEFCNKTFRASSYLQNHRRIHTGEKPHPCTVCGKR 534

Query: 122 FRVRSDMKRHLNTHN 136
           FRVRSDMKRH++TH+
Sbjct: 535 FRVRSDMKRHMHTHS 549

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411473|ref|XP_003489363.1| PREDICTED: zinc finger protein 45-like [Bombus impatiens]

 Score =  238 bits (606), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 104/135 (77%), Positives = 120/135 (88%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C+ CGKSFF+++ALKVH R+H G KPY CE CGRHFRQWGDLKYH  S+HS+ K +QCEY
Sbjct: 414 CEVCGKSFFAASALKVHKRLHSGDKPYKCEECGRHFRQWGDLKYHATSIHSEQKQYQCEY 473

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGKDFARKYSL+VHRRIHTGE+NY+CE+C+K FRASSYLQNHRRIHTGEKPH C VC K 
Sbjct: 474 CGKDFARKYSLIVHRRIHTGEKNYRCEYCNKTFRASSYLQNHRRIHTGEKPHQCAVCGKP 533

Query: 122 FRVRSDMKRHLNTHN 136
           FRVRSDMKRH++TH+
Sbjct: 534 FRVRSDMKRHMHTHS 548

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020763|ref|XP_003694248.1| PREDICTED: zinc finger protein 227-like [Apis florea]

 Score =  238 bits (606), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 104/135 (77%), Positives = 120/135 (88%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C+ CGKSFF+++ALKVH R+H G KPY CE CGRHFRQWGDLKYH  S+HS+ K +QCEY
Sbjct: 412 CEVCGKSFFAASALKVHKRLHSGDKPYKCEECGRHFRQWGDLKYHSTSIHSEQKQYQCEY 471

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGKDFARKYSL+VHRRIHTGE+NY+CE+C+K FRASSYLQNHRRIHTGEKPH C VC K 
Sbjct: 472 CGKDFARKYSLIVHRRIHTGEKNYRCEYCNKTFRASSYLQNHRRIHTGEKPHQCAVCGKP 531

Query: 122 FRVRSDMKRHLNTHN 136
           FRVRSDMKRH++TH+
Sbjct: 532 FRVRSDMKRHMHTHS 546

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729771|ref|XP_003403169.1| PREDICTED: zinc finger protein 45-like [Bombus terrestris]

 Score =  238 bits (606), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 104/135 (77%), Positives = 120/135 (88%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C+ CGKSFF+++ALKVH R+H G KPY CE CGRHFRQWGDLKYH  S+HS+ K +QCEY
Sbjct: 414 CEVCGKSFFAASALKVHKRLHSGDKPYKCEECGRHFRQWGDLKYHATSIHSEQKQYQCEY 473

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGKDFARKYSL+VHRRIHTGE+NY+CE+C+K FRASSYLQNHRRIHTGEKPH C VC K 
Sbjct: 474 CGKDFARKYSLIVHRRIHTGEKNYRCEYCNKTFRASSYLQNHRRIHTGEKPHQCAVCGKP 533

Query: 122 FRVRSDMKRHLNTHN 136
           FRVRSDMKRH++TH+
Sbjct: 534 FRVRSDMKRHMHTHS 548

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787424|ref|XP_395120.3| PREDICTED: zinc finger protein 227-like [Apis mellifera]

 Score =  238 bits (606), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 104/135 (77%), Positives = 120/135 (88%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C+ CGKSFF+++ALKVH R+H G KPY CE CGRHFRQWGDLKYH  S+HS+ K +QCEY
Sbjct: 414 CEVCGKSFFAASALKVHKRLHSGDKPYKCEECGRHFRQWGDLKYHSTSIHSEQKQYQCEY 473

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGKDFARKYSL+VHRRIHTGE+NY+CE+C+K FRASSYLQNHRRIHTGEKPH C VC K 
Sbjct: 474 CGKDFARKYSLIVHRRIHTGEKNYRCEYCNKTFRASSYLQNHRRIHTGEKPHQCAVCGKP 533

Query: 122 FRVRSDMKRHLNTHN 136
           FRVRSDMKRH++TH+
Sbjct: 534 FRVRSDMKRHMHTHS 548

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242009920|ref|XP_002425730.1| zinc finger protein, putative [Pediculus humanus corporis] gi|212509631|gb|EEB12992.1| zinc finger protein, putative [Pediculus humanus corporis]

 Score =  236 bits (601), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 110/164 (67%), Positives = 125/164 (76%), Gaps = 7/164 (4%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C+ CGK FF++ ALKVH R H G+KP+ CE CGR+FRQWGDLKYH  S+HSD K FQCEY
Sbjct: 670 CEVCGKGFFATNALKVHMRQHSGVKPFKCEFCGRNFRQWGDLKYHCISIHSDQKNFQCEY 729

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGKDFARKYSL VH RIHTGERNY+CEFC K+FRASSYLQNHRRIHTGEKPH C VC K 
Sbjct: 730 CGKDFARKYSLTVHSRIHTGERNYKCEFCEKSFRASSYLQNHRRIHTGEKPHPCDVCGKP 789

Query: 122 FRVRSDMKRHLNTHNVDARQYLTVTGSQTGAPIKKEPKQECNGD 165
           FRVRSDMKRH+ TH+ +      +        IK+EP+   N D
Sbjct: 790 FRVRSDMKRHMITHSKEPYSTFVMK-------IKREPQTPSNND 826

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270005714|gb|EFA02162.1| hypothetical protein TcasGA2_TC007815 [Tribolium castaneum]

 Score =  231 bits (589), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 105/135 (77%), Positives = 117/135 (86%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           CD CGKSFF+S+ALKVH R+H G KPY C+ CG++FRQWGDLKYH  SLHS+ K FQCEY
Sbjct: 447 CDQCGKSFFASSALKVHLRLHSGDKPYHCQDCGKNFRQWGDLKYHMTSLHSNEKQFQCEY 506

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGKDFARKYSL+VHRRIHTGE+NY+CEFC K FRASSYLQNHRRIHTGEKPH C +C K 
Sbjct: 507 CGKDFARKYSLIVHRRIHTGEKNYKCEFCGKTFRASSYLQNHRRIHTGEKPHECGICGKP 566

Query: 122 FRVRSDMKRHLNTHN 136
           FRVRSDMKRH  TH+
Sbjct: 567 FRVRSDMKRHQKTHS 581

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080335|ref|XP_974602.1| PREDICTED: similar to AGAP010009-PA [Tribolium castaneum]

 Score =  231 bits (588), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 105/135 (77%), Positives = 117/135 (86%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           CD CGKSFF+S+ALKVH R+H G KPY C+ CG++FRQWGDLKYH  SLHS+ K FQCEY
Sbjct: 463 CDQCGKSFFASSALKVHLRLHSGDKPYHCQDCGKNFRQWGDLKYHMTSLHSNEKQFQCEY 522

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGKDFARKYSL+VHRRIHTGE+NY+CEFC K FRASSYLQNHRRIHTGEKPH C +C K 
Sbjct: 523 CGKDFARKYSLIVHRRIHTGEKNYKCEFCGKTFRASSYLQNHRRIHTGEKPHECGICGKP 582

Query: 122 FRVRSDMKRHLNTHN 136
           FRVRSDMKRH  TH+
Sbjct: 583 FRVRSDMKRHQKTHS 597

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016289|gb|EGI57202.1| Zinc finger protein 192 [Acromyrmex echinatior]

 Score =  231 bits (588), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 101/135 (74%), Positives = 116/135 (85%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           CD C K FF+++ALKVH R+H G KPY CE CGRHFRQWGDLKYH  SLHS+ K +QCEY
Sbjct: 420 CDICSKRFFAASALKVHKRLHSGDKPYKCEECGRHFRQWGDLKYHLTSLHSEHKQYQCEY 479

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           C K+FARKYSL++HRRIHTGE+NY+CE+C+K FRASSYLQNHRRIHTGEKPH C VC K 
Sbjct: 480 CAKEFARKYSLILHRRIHTGEKNYRCEYCNKTFRASSYLQNHRRIHTGEKPHQCGVCGKP 539

Query: 122 FRVRSDMKRHLNTHN 136
           FRVRSDMKRH+ TH+
Sbjct: 540 FRVRSDMKRHMQTHS 554

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722486|ref|XP_001946974.2| PREDICTED: zinc finger protein 611-like [Acyrthosiphon pisum]

 Score =  227 bits (578), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 113/178 (63%), Positives = 129/178 (72%), Gaps = 8/178 (4%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C  C KSFFSS+ALKVHNR+H G KP+ CE CGR+FRQWGDLKYH ASLHS+ K FQCE+
Sbjct: 502 CKLCPKSFFSSSALKVHNRLHTGDKPFECEWCGRNFRQWGDLKYHIASLHSESKQFQCEF 561

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGKDFARKYSL+VHRRIHTGE+NY CEFC K FRASSYLQNHRRIHTGEKP+ C  C K 
Sbjct: 562 CGKDFARKYSLIVHRRIHTGEKNYVCEFCKKTFRASSYLQNHRRIHTGEKPYKCETCGKA 621

Query: 122 FRVRSDMKRHLNTHN---VDARQYLTVTGSQTGAPIKKE-----PKQECNGDYWSYES 171
           FRVRSDM+RH   H    V++ Q  +  G  +G     +      K E N D  + ES
Sbjct: 622 FRVRSDMRRHTVVHRKDVVNSVQINSYAGQVSGIVTSSDMSIHLTKLEVNKDKITAES 679

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
FB|FBgn0031573	714	CG3407 [Drosophila melanogaste	0.789	0.189	0.6	4.4e-47
UNIPROTKB|H9KYX9	421	ZNF517 "Uncharacterized protei	0.812	0.330	0.475	1.9e-35
UNIPROTKB|Q9UK10	706	ZNF225 "Zinc finger protein 22	0.777	0.188	0.514	3.1e-35
UNIPROTKB|Q8NDQ6	660	ZNF540 "Zinc finger protein 54	0.789	0.204	0.492	6.3e-35
UNIPROTKB|F1MUM4	460	ZNF500 "Uncharacterized protei	0.777	0.289	0.470	7.4e-34
UNIPROTKB|Q12901	538	ZNF155 "Zinc finger protein 15	0.777	0.247	0.507	8.7e-34
UNIPROTKB|F1MX34	1053	F1MX34 "Uncharacterized protei	0.777	0.126	0.492	1.1e-33
UNIPROTKB|J3KQ08	549	ZNF155 "Zinc finger protein 15	0.777	0.242	0.507	1.1e-33
UNIPROTKB|Q9UK13	617	ZNF221 "Zinc finger protein 22	0.777	0.215	0.514	1.2e-33
ZFIN|ZDB-GENE-110913-29	443	si:ch73-289h5.2 "si:ch73-289h5	0.807	0.311	0.467	1.5e-33

FB|FBgn0031573 CG3407 [Drosophila melanogaster (taxid:7227)]

 Score = 494 (179.0 bits), Expect = 4.4e-47, P = 4.4e-47
 Identities = 81/135 (60%), Positives = 103/135 (76%)

Query:     2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
             CD+C +SF++ +ALK H R H G+KP+ C+ C   FRQWGDLKYH  S HSDVKA  CE+
Sbjct:   525 CDSCERSFYTQSALKAHERTHSGVKPFKCDKCEFQFRQWGDLKYHIISRHSDVKAHMCEF 584

Query:    62 CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
             CGK F+R+YSLVVHRRIHT E+NY C++C K FRASSYL +H ++HTGE+P+ C +C K 
Sbjct:   585 CGKSFSRRYSLVVHRRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSICEKK 644

Query:   122 FRVRSDMKRHLNTHN 136
             FRV  D+KRH   H+
Sbjct:   645 FRVSGDLKRHSRIHD 659

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|H9KYX9 ZNF517 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 67/141 (47%), Positives = 90/141 (63%)

Query:     2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
             C  CGKSF  ST L  H R+H G +PY C  CG+ F++   L  H+  +H+  + +QC  
Sbjct:   259 CHECGKSFRRSTHLVCHRRIHTGERPYECSECGKSFKKSTHLVCHRR-IHTGDRPYQCSE 317

Query:    62 CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
             CGK F  +  L+ H+R+HTGER Y+C  CHK+FRA S+L+ H+ +HTGE+PH CP C K 
Sbjct:   318 CGKSFKSRTELICHQRVHTGERPYKCPECHKSFRARSHLRYHQHVHTGERPHKCPECGKG 377

Query:   122 FRVRSDMKRHLNTHNVDARQY 142
             +R  SD+K H  TH  D R Y
Sbjct:   378 YRSNSDLKYHRRTHTGD-RPY 397

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9UK10 ZNF225 "Zinc finger protein 225" [Homo sapiens (taxid:9606)]

 Score = 388 (141.6 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 69/134 (51%), Positives = 91/134 (67%)

Query:     2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
             CD CGKSF  S+AL++H RVH+G K Y C+VCG+ F Q   L+ H+  +H+  K F+CE 
Sbjct:   178 CDECGKSFCYSSALRIHQRVHMGEKLYNCDVCGKEFNQSSHLQIHQR-IHTGEKPFKCEQ 236

Query:    62 CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
             CGK F+R+  L VHR++HTG + + CE C KAF   S LQ H+RIHTGEKP  C +C K 
Sbjct:   237 CGKGFSRRSGLYVHRKLHTGVKPHICEKCGKAFIHDSQLQEHQRIHTGEKPFKCDICCKS 296

Query:   122 FRVRSDMKRHLNTH 135
             FR R+++ RH   H
Sbjct:   297 FRSRANLNRHSMVH 310

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q8NDQ6 ZNF540 "Zinc finger protein 540" [Homo sapiens (taxid:9606)]

 Score = 384 (140.2 bits), Expect = 6.3e-35, P = 6.3e-35
 Identities = 67/136 (49%), Positives = 91/136 (66%)

Query:     2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
             C  CGK+F     LK H ++H GLKPY C+ CG+ F + G    H+  +H+ VK ++C+ 
Sbjct:   525 CKECGKAFIRRGNLKEHLKIHSGLKPYDCKECGKSFSRRGQFTEHQ-KIHTGVKPYKCKE 583

Query:    62 CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
             CGK F+R   L +H+RIHTGE+ Y+C+ C KAFR +S+L  H+RIHTGEKP+ C VC K 
Sbjct:   584 CGKAFSRSVDLRIHQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKA 643

Query:   122 FRVRSDMKRHLNTHNV 137
             FR  S + +H  THNV
Sbjct:   644 FRQYSHLYQHQKTHNV 659

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0000900 "translation repressor activity, nucleic acid binding" evidence=IMP

GO:0017148 "negative regulation of translation" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1MUM4 ZNF500 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 63/134 (47%), Positives = 84/134 (62%)

Query:     2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
             C  CGK+F  ++ L  H R H G +PY C+VCG+ F    +   H+  +H+  K + C  
Sbjct:   308 CPECGKAFRKTSHLTKHQRTHTGERPYQCQVCGKRFGDRSNCSTHQR-VHTGEKPYACAE 366

Query:    62 CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
             CGK F++  SLV+HRR HTGER YQC+ C K F  SS+   HRR HTGEKPH CP C + 
Sbjct:   367 CGKRFSQSSSLVIHRRTHTGERPYQCQLCGKRFNNSSHFSAHRRTHTGEKPHTCPACGRG 426

Query:   122 FRVRSDMKRHLNTH 135
             FR  +D+++H  TH
Sbjct:   427 FRRGTDLRKHQRTH 440

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q12901 ZNF155 "Zinc finger protein 155" [Homo sapiens (taxid:9606)]

 Score = 368 (134.6 bits), Expect = 8.7e-34, P = 8.7e-34
 Identities = 68/134 (50%), Positives = 88/134 (65%)

Query:     2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
             CD CGKS    +AL VH RVH+G K + C+VCG+ F Q   L+ H+  +H+  K F+CE 
Sbjct:   178 CDECGKSICYISALHVHQRVHVGEKLFMCDVCGKEFSQSSHLQTHQR-VHTGEKPFKCEQ 236

Query:    62 CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
             CGK F+R+ +L VHR++HTGE+ Y CE C KAF   S L+ H+RIHTGEKP  C +C K 
Sbjct:   237 CGKGFSRRSALNVHRKLHTGEKPYICEACGKAFIHDSQLKEHKRIHTGEKPFKCDICGKT 296

Query:   122 FRVRSDMKRHLNTH 135
             F  RS +K H   H
Sbjct:   297 FYFRSRLKSHSMVH 310

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

UNIPROTKB|F1MX34 F1MX34 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 378 (138.1 bits), Expect = 1.1e-33, P = 1.1e-33
 Identities = 66/134 (49%), Positives = 88/134 (65%)

Query:     2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
             CD CGK F  S++L VH RVH G KPY C+ CG+ F Q   L  H+  +H+  K+++C+ 
Sbjct:   680 CDICGKGFSVSSSLAVHQRVHTGEKPYKCDTCGKAFNQTAKLGLHQ-KIHTGEKSYKCDV 738

Query:    62 CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
             CGK F+R  +L VHRR+HTGE+ Y+C+ C KAFR SS L  H+R+HTGEKP+ C VC K 
Sbjct:   739 CGKAFSRTGNLTVHRRVHTGEKPYKCDMCGKAFRVSSNLAVHQRVHTGEKPYKCDVCGKA 798

Query:   122 FRVRSDMKRHLNTH 135
             F   + +  H   H
Sbjct:   799 FSQATGLAVHQRIH 812

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J3KQ08 ZNF155 "Zinc finger protein 155" [Homo sapiens (taxid:9606)]

 Score = 368 (134.6 bits), Expect = 1.1e-33, P = 1.1e-33
 Identities = 68/134 (50%), Positives = 88/134 (65%)

Query:     2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
             CD CGKS    +AL VH RVH+G K + C+VCG+ F Q   L+ H+  +H+  K F+CE 
Sbjct:   189 CDECGKSICYISALHVHQRVHVGEKLFMCDVCGKEFSQSSHLQTHQR-VHTGEKPFKCEQ 247

Query:    62 CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
             CGK F+R+ +L VHR++HTGE+ Y CE C KAF   S L+ H+RIHTGEKP  C +C K 
Sbjct:   248 CGKGFSRRSALNVHRKLHTGEKPYICEACGKAFIHDSQLKEHKRIHTGEKPFKCDICGKT 307

Query:   122 FRVRSDMKRHLNTH 135
             F  RS +K H   H
Sbjct:   308 FYFRSRLKSHSMVH 321

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9UK13 ZNF221 "Zinc finger protein 221" [Homo sapiens (taxid:9606)]

 Score = 371 (135.7 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 69/134 (51%), Positives = 86/134 (64%)

Query:     2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
             C  CGKSF  S AL +H RVH+G K Y C+VCG+ F Q   L+ H+  +H+  K F+C  
Sbjct:   200 CGECGKSFCYSPALHIHQRVHMGEKCYKCDVCGKEFNQSSHLQTHQR-VHTGEKPFKCGQ 258

Query:    62 CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
             CGK F  + +L VH ++HTGE+ Y CE C KAF   S LQ H+RIHTGEKP  C +C K 
Sbjct:   259 CGKGFHSRSALNVHCKLHTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPFKCDICGKS 318

Query:   122 FRVRSDMKRHLNTH 135
             FRVRS + RH   H
Sbjct:   319 FRVRSRLNRHSMVH 332

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-110913-29 si:ch73-289h5.2 "si:ch73-289h5.2" [Danio rerio (taxid:7955)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 65/139 (46%), Positives = 86/139 (61%)

Query:     2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
             C  CG+SF++   L VH R+H G KPY C  CG+ F+Q G LK H  S H+  + + C+ 
Sbjct:   163 CQQCGQSFYTGGNLAVHMRIHTGEKPYSCIQCGKSFKQNGTLKVHMRS-HTGERPYTCQL 221

Query:    62 CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
             CGK F    +   H RIHTGER Y C+ C K+F  S+ L  H RIHTGEKP+ CP C K 
Sbjct:   222 CGKSFYTTGNFAQHMRIHTGERPYTCQQCGKSFYQSANLAAHMRIHTGEKPYSCPQCGKT 281

Query:   122 FRVRSDMKRHLNTHNVDAR 140
             F+  S+++ H+ THN + R
Sbjct:   282 FKQNSNLEAHIKTHNREKR 300

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9UK10	ZN225_HUMAN	No assigned EC number	0.5149	0.7777	0.1883	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	171
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	7e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.001
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.003

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 38.9 bits (90), Expect = 7e-04
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 83  RNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDM---KRHLNTHN 136
           R   C  C  +F    +L  H R HTGEKP  C          S      RHL TH+
Sbjct: 32  RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKS-FSRPLELSRHLRTHH 87

Length = 467

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 34.7 bits (80), Expect = 0.001
 Identities = 15/24 (62%), Positives = 17/24 (70%)

Query: 99  YLQNHRRIHTGEKPHFCPVCNKMF 122
            L+ H R HTGEKP+ CPVC K F
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSF 24

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 12/24 (50%), Positives = 16/24 (66%)

Query: 71 SLVVHRRIHTGERNYQCEFCHKAF 94
          +L  H R HTGE+ Y+C  C K+F
Sbjct: 1  NLRRHMRTHTGEKPYKCPVCGKSF 24

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	171
KOG2462|consensus	279		99.97
KOG2462|consensus	279		99.91
KOG1074|consensus	958		99.85
KOG3608|consensus	467		99.84
KOG3576|consensus	267		99.77
KOG1074|consensus	958		99.77
KOG3608|consensus	467		99.75
KOG3576|consensus	267		99.75
KOG3623|consensus	1007		99.68
KOG3623|consensus	1007		99.62
PLN03086	567	PRLI-interacting factor K; Provisional	99.41
PHA00733	128	hypothetical protein	99.26
PHA00733	128	hypothetical protein	99.17
PHA02768	55	hypothetical protein; Provisional	99.12
PLN03086	567	PRLI-interacting factor K; Provisional	99.11
PHA02768	55	hypothetical protein; Provisional	98.92
KOG3993|consensus	500		98.85
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.8
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.78
KOG3993|consensus	500		98.69
PHA00616	44	hypothetical protein	98.57
PHA00616	44	hypothetical protein	98.52
PHA00732	79	hypothetical protein	98.49
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.47
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.31
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.23
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.17
PHA00732	79	hypothetical protein	98.15
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.02
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.93
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.89
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.88
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.84
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.61
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.6
smart00355	26	ZnF_C2H2 zinc finger.	97.53
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.44
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.44
KOG1146|consensus	1406		97.43
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.13
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.13
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.0
smart00355	26	ZnF_C2H2 zinc finger.	96.97
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.96
PRK04860	160	hypothetical protein; Provisional	96.94
KOG2231|consensus	669		96.67
KOG2231|consensus	669		96.57
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.53
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.11
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.03
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.84
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.65
PRK04860	160	hypothetical protein; Provisional	95.5
COG5048	467	FOG: Zn-finger [General function prediction only]	95.09
COG4049	65	Uncharacterized protein containing archaeal-type C	95.03
KOG1146|consensus	1406		94.85
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.64
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	94.33
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.21
COG4049	65	Uncharacterized protein containing archaeal-type C	94.18
KOG2482|consensus	423		94.08
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.88
KOG4173|consensus	253		93.69
KOG4173|consensus	253		93.67
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	93.43
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.1
KOG2893|consensus	341		92.43
KOG2482|consensus	423		92.16
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	91.73
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	91.06
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	90.51
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	90.49
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	90.16
PHA00626	59	hypothetical protein	89.82
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	89.73
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	89.65
KOG2893|consensus	341		89.11
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	88.82
COG5048	467	FOG: Zn-finger [General function prediction only]	88.73
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	88.39
KOG2186|consensus	276		86.94
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	86.89
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	86.8
COG1592	166	Rubrerythrin [Energy production and conversion]	86.66
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	86.41
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	86.21
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	86.17
KOG2785|consensus	390		85.87
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	85.79
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	85.5
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	84.88
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	84.18
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	84.13
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	83.09
PF14353	128	CpXC: CpXC protein	82.9
smart00531	147	TFIIE Transcription initiation factor IIE.	82.51
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	81.86
PF08274	30	PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR01	81.85
PRK06266	178	transcription initiation factor E subunit alpha; V	81.6
PRK06266	178	transcription initiation factor E subunit alpha; V	80.65

>KOG2462|consensus

Probab=99.97  E-value=1.7e-32  Score=185.35  Aligned_cols=131  Identities=37%  Similarity=0.750  Sum_probs=124.3

Q ss_pred             CCCccccccCChhhHHHHHHHcCC---CCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHh
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHLG---LKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRR   77 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~   77 (171)
                      +|++|++.+.+..+|.+|.+.|..   .+.+.|++|++.+.+...|..|++ +|.  -+.+|.+||+.|...|.|+.|++
T Consensus       132 ~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHir-TH~--l~c~C~iCGKaFSRPWLLQGHiR  208 (279)
T KOG2462|consen  132 KCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIR-THT--LPCECGICGKAFSRPWLLQGHIR  208 (279)
T ss_pred             eccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhh-ccC--CCcccccccccccchHHhhcccc
Confidence            699999999999999999999876   467999999999999999999998 575  57899999999999999999999


Q ss_pred             hhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHH
Q psy12258         78 IHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNT  134 (171)
Q Consensus        78 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  134 (171)
                      .|+|+|||.|+.|+++|...+.|+.|+++|.+.++|.|..|+|.|...+.|.+|...
T Consensus       209 THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  209 THTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999999999999999999999999999764

>KOG2462|consensus

Probab=99.91  E-value=7.5e-25  Score=148.50  Aligned_cols=103  Identities=38%  Similarity=0.703  Sum_probs=99.2

Q ss_pred             CCCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhc
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHT   80 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~   80 (171)
                      +|+.|+++|.....|..|+++|.  -++.|.+||+.|+..+.|+.|++ .|+|++||.|+.|++.|-++++|..||.+|.
T Consensus       163 ~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiR-THTGEKPF~C~hC~kAFADRSNLRAHmQTHS  239 (279)
T KOG2462|consen  163 SCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIR-THTGEKPFSCPHCGKAFADRSNLRAHMQTHS  239 (279)
T ss_pred             cCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccc-cccCCCCccCCcccchhcchHHHHHHHHhhc
Confidence            59999999999999999999997  67999999999999999999999 7999999999999999999999999999999


Q ss_pred             CCCCccCccchhhcCCHHHHHHHHHH
Q psy12258         81 GERNYQCEFCHKAFRASSYLQNHRRI  106 (171)
Q Consensus        81 ~~~~~~C~~C~~~~~~~~~l~~H~~~  106 (171)
                      +.|+|.|+.|++.|...+.|.+|...
T Consensus       240 ~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  240 DVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             CCccccCcchhhHHHHHHHHHHhhhh
Confidence            99999999999999999999999764

>KOG1074|consensus

Probab=99.85  E-value=1.5e-22  Score=154.47  Aligned_cols=87  Identities=29%  Similarity=0.591  Sum_probs=75.9

Q ss_pred             cccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCC----CCccCc---ccccccCCchhH
Q psy12258         56 AFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE----KPHFCP---VCNKMFRVRSDM  128 (171)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~----~~~~C~---~C~~~f~~~~~l  128 (171)
                      +.+|.+|.+...-.+.|+.|++.|+|++||+|.+||++|+.+..|+.|+.+|...    .++.|+   +|-+.|...-.|
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            3689999999999999999999999999999999999999999999999888543    457899   999999999999


Q ss_pred             HHHHHHhccCcccc
Q psy12258        129 KRHLNTHNVDARQY  142 (171)
Q Consensus       129 ~~H~~~h~~~~~~~  142 (171)
                      ..|+++|.++..+.
T Consensus       685 pQhIriH~~~~~s~  698 (958)
T KOG1074|consen  685 PQHIRIHLGGQISN  698 (958)
T ss_pred             cceEEeecCCCCCC
Confidence            99999998665543

>KOG3608|consensus

Probab=99.84  E-value=5.5e-21  Score=133.63  Aligned_cols=133  Identities=30%  Similarity=0.511  Sum_probs=103.9

Q ss_pred             CCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcC-CCCCcccccchhhhccChHHHHHHHhhhc
Q psy12258          2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLH-SDVKAFQCEYCGKDFARKYSLVVHRRIHT   80 (171)
Q Consensus         2 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h-~~~~~~~C~~C~~~~~~~~~l~~h~~~~~   80 (171)
                      |..|-..+..+..|++|++.|.+++...|+.||..|.....|..|.+... ....+|.|..|.+.|-+...|..|+..|.
T Consensus       182 W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv  261 (467)
T KOG3608|consen  182 WAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV  261 (467)
T ss_pred             chhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh
Confidence            45688899999999999999999999999999999999999999987422 23456778888888877777777777763


Q ss_pred             CCCCccCccchhhcCCHHHHHHHHHH-hcCCCCccCcccccccCCchhHHHHHHHhc
Q psy12258         81 GERNYQCEFCHKAFRASSYLQNHRRI-HTGEKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus        81 ~~~~~~C~~C~~~~~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                        .-|+|+.|+......++|..|++. |...+||+|..|++.|...++|.+|+..|.
T Consensus       262 --n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  262 --NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             --hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence              456777777777777777777765 555677777777777777777777776665

>KOG3576|consensus

Probab=99.77  E-value=7.5e-20  Score=119.05  Aligned_cols=115  Identities=34%  Similarity=0.618  Sum_probs=103.3

Q ss_pred             CCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHH
Q psy12258         26 KPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRR  105 (171)
Q Consensus        26 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~  105 (171)
                      ..|.|.+|++.|.....|.+|++ -|...+.+.|..||+.|.+.-+|.+|++.|+|.+||+|..|+++|++.-+|..|.+
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~k-ch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLK-CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhh-hccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            34899999999999999999998 69889999999999999999999999999999999999999999999999999988


Q ss_pred             HhcC-----------CCCccCcccccccCCchhHHHHHHHhccCccc
Q psy12258        106 IHTG-----------EKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQ  141 (171)
Q Consensus       106 ~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  141 (171)
                      ..++           .+.|.|..||..-.....+..|+..||.....
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            7554           45699999999888888899999998876543

>KOG1074|consensus

Probab=99.77  E-value=2.1e-19  Score=137.45  Aligned_cols=143  Identities=36%  Similarity=0.715  Sum_probs=120.7

Q ss_pred             CCCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCC----ccccc---chhhhccChHHHH
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVK----AFQCE---YCGKDFARKYSLV   73 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~----~~~C~---~C~~~~~~~~~l~   73 (171)
                      +|-+|.++...+..|+.|.++|++++||+|.+||+.|....+|+.||. .|....    .+.|+   +|.+-|.+.-.|.
T Consensus       607 qCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~-vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMS-VHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             ceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhccc-ccccCccccccccCCchhhhccccccccccc
Confidence            588999999999999999999999999999999999999999999997 675433    35666   6776666666666


Q ss_pred             HHHhhhcCC-----------------------------------------------------------------------
Q psy12258         74 VHRRIHTGE-----------------------------------------------------------------------   82 (171)
Q Consensus        74 ~h~~~~~~~-----------------------------------------------------------------------   82 (171)
                      .|++.|.+.                                                                       
T Consensus       686 QhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~  765 (958)
T KOG1074|consen  686 QHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGR  765 (958)
T ss_pred             ceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccccc
Confidence            666555410                                                                       


Q ss_pred             --------------------------------------------------------------------------------
Q psy12258         83 --------------------------------------------------------------------------------   82 (171)
Q Consensus        83 --------------------------------------------------------------------------------   82 (171)
                                                                                                      
T Consensus       766 ~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~  845 (958)
T KOG1074|consen  766 ELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKT  845 (958)
T ss_pred             ccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccccc
Confidence                                                                                            


Q ss_pred             --------------------------------CCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHH
Q psy12258         83 --------------------------------RNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKR  130 (171)
Q Consensus        83 --------------------------------~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  130 (171)
                                                      ....|..|++.|...+.|+.|+++|++++||.|.+|++.|..+.+|..
T Consensus       846 n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKv  925 (958)
T KOG1074|consen  846 NEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKV  925 (958)
T ss_pred             ccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhh
Confidence                                            005699999999999999999999999999999999999999999999


Q ss_pred             HHHHhccCcccccc
Q psy12258        131 HLNTHNVDARQYLT  144 (171)
Q Consensus       131 H~~~h~~~~~~~~~  144 (171)
                      ||..|+....+..-
T Consensus       926 HMgtH~w~q~~srr  939 (958)
T KOG1074|consen  926 HMGTHMWVQPPSRR  939 (958)
T ss_pred             hhccccccCCCccC
Confidence            99999877665444

>KOG3608|consensus

Probab=99.75  E-value=1.9e-18  Score=121.07  Aligned_cols=132  Identities=28%  Similarity=0.543  Sum_probs=102.0

Q ss_pred             CCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcC
Q psy12258          2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTG   81 (171)
Q Consensus         2 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~   81 (171)
                      |..|.+.|.+...|..|+..|.  ..|+|+.|..+....++|..|++.-|+..+||+|..|+..+...+.|+.|...|. 
T Consensus       240 C~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-  316 (467)
T KOG3608|consen  240 CAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-  316 (467)
T ss_pred             HHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-
Confidence            5566666666666666666664  3478888888888888888888888888888888888888888888888888765 


Q ss_pred             CCCccCcc--chhhcCCHHHHHHHHHHhc-C--CCCccCcccccccCCchhHHHHHHHhc
Q psy12258         82 ERNYQCEF--CHKAFRASSYLQNHRRIHT-G--EKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus        82 ~~~~~C~~--C~~~~~~~~~l~~H~~~h~-~--~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      +..|.|.-  |...+.+...+.+|...++ +  +-+|.|..|.+-|++-.+|..|++.-|
T Consensus       317 ~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  317 KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKH  376 (467)
T ss_pred             ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhh
Confidence            66788866  8888888888888887655 3  446889999999988888988875443

>KOG3576|consensus

Probab=99.75  E-value=3.5e-19  Score=115.96  Aligned_cols=110  Identities=31%  Similarity=0.575  Sum_probs=101.8

Q ss_pred             CCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcC
Q psy12258          2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTG   81 (171)
Q Consensus         2 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~   81 (171)
                      |.+|++.|.-..-|.+|++-|..-+.+.|..||++|.+-.+|.+|++ +|++.+||+|..|++.|+....|..|++.-++
T Consensus       120 CrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~r-thtgvrpykc~~c~kaftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  120 CRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTR-THTGVRPYKCSLCEKAFTQRCSLESHLKKVHG  198 (267)
T ss_pred             eehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhc-cccCccccchhhhhHHHHhhccHHHHHHHHcC
Confidence            88999999999999999999999999999999999999999999999 79999999999999999999999999887665


Q ss_pred             -----------CCCccCccchhhcCCHHHHHHHHHHhcCCCC
Q psy12258         82 -----------ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP  112 (171)
Q Consensus        82 -----------~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~  112 (171)
                                 .+.|.|..||..-.....+..|+..|+...|
T Consensus       199 v~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  199 VQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             chHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence                       4679999999999999999999998876543

>KOG3623|consensus

Probab=99.68  E-value=1.1e-17  Score=126.59  Aligned_cols=106  Identities=34%  Similarity=0.674  Sum_probs=94.9

Q ss_pred             eeCCccchhccCcccHHHhhhhcCCC-CCcccccchhhhccChHHHHHHHhhhcC-------------CCCccCccchhh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKASLHSD-VKAFQCEYCGKDFARKYSLVVHRRIHTG-------------ERNYQCEFCHKA   93 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~~C~~C~~~~~~~~~l~~h~~~~~~-------------~~~~~C~~C~~~   93 (171)
                      .+|++|.+++.+...|+.|++..|.. +..|.|..|..+|-+...|.+||..|..             .+.|+|++|+++
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            67999999999999999998876653 4458899999999999999999988753             345999999999


Q ss_pred             cCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHH
Q psy12258         94 FRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus        94 ~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      |+.+..|..|+++|.|++||.|+-|+|.|...+.+..||-
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            9999999999999999999999999999999999999984

>KOG3623|consensus

Probab=99.62  E-value=2.8e-16  Score=119.22  Aligned_cols=80  Identities=39%  Similarity=0.810  Sum_probs=77.0

Q ss_pred             CCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHH
Q psy12258         54 VKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      ...|.|..|+++|--.+.|.+|...|+|.+||+|.+|.++|+.+..|..|.+.|.|++||.|.+|+|.|...+.+..||.
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            35699999999999999999999999999999999999999999999999999999999999999999999999999985

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.41  E-value=2.9e-13  Score=102.52  Aligned_cols=103  Identities=25%  Similarity=0.553  Sum_probs=81.6

Q ss_pred             CCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcC----------
Q psy12258         26 KPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFR----------   95 (171)
Q Consensus        26 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~----------   95 (171)
                      +.+.|+.|++.|. ...|..|+...|   .++.|+ |+..+ ....|..|+..+.+.+++.|+.|+..+.          
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H---kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d  525 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH---EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRD  525 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC---CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhh
Confidence            3468999999986 577899988533   678999 99755 5678899999898999999999998884          


Q ss_pred             CHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhc
Q psy12258         96 ASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus        96 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      ....|..|.... +.+++.|..||+.+..+ .|..|+...|
T Consensus       526 ~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        526 RLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             hhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHhh
Confidence            235788898874 88899999999888655 6778876544

>PHA00733 hypothetical protein

Probab=99.26  E-value=6.1e-12  Score=78.79  Aligned_cols=82  Identities=23%  Similarity=0.332  Sum_probs=65.2

Q ss_pred             CCcccccchhhhccChHHHHHH--H---hhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhH
Q psy12258         54 VKAFQCEYCGKDFARKYSLVVH--R---RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDM  128 (171)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h--~---~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  128 (171)
                      .+++.|.+|...|.....|..+  +   ..+++.++|.|+.|++.|.+...|..|++.+  ..+|.|+.|++.|...+.|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            4567888888777776666554  1   2334578999999999999999999999876  4579999999999999999


Q ss_pred             HHHHHHhcc
Q psy12258        129 KRHLNTHNV  137 (171)
Q Consensus       129 ~~H~~~h~~  137 (171)
                      ..|+...|.
T Consensus       116 ~~H~~~~h~  124 (128)
T PHA00733        116 LDHVCKKHN  124 (128)
T ss_pred             HHHHHHhcC
Confidence            999876653

>PHA00733 hypothetical protein

Probab=99.17  E-value=2.6e-11  Score=75.94  Aligned_cols=83  Identities=22%  Similarity=0.224  Sum_probs=68.8

Q ss_pred             CCCeeCCccchhccCcccHHHh--hh--hcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHH
Q psy12258         25 LKPYGCEVCGRHFRQWGDLKYH--KA--SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYL  100 (171)
Q Consensus        25 ~~~~~C~~C~~~f~~~~~l~~H--~~--~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l  100 (171)
                      .+++.|.+|...|.....|..+  +.  ..+...++|.|..|++.|.....|..|+..+  ..++.|..|++.|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            5678999999988887666655  11  1234578999999999999999999999876  4579999999999999999


Q ss_pred             HHHHHHhcC
Q psy12258        101 QNHRRIHTG  109 (171)
Q Consensus       101 ~~H~~~h~~  109 (171)
                      ..|+...++
T Consensus       116 ~~H~~~~h~  124 (128)
T PHA00733        116 LDHVCKKHN  124 (128)
T ss_pred             HHHHHHhcC
Confidence            999988765

>PHA02768 hypothetical protein; Provisional

Probab=99.12  E-value=3.2e-11  Score=62.94  Aligned_cols=44  Identities=16%  Similarity=0.371  Sum_probs=36.9

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHH
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMK  129 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  129 (171)
                      .|.|+.||+.|...+.|..|+++|+  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4789999999999999999999887  6888999999888777653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.11  E-value=1.7e-10  Score=87.81  Aligned_cols=98  Identities=22%  Similarity=0.555  Sum_probs=80.9

Q ss_pred             CCCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccC----------hH
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFAR----------KY   70 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~----------~~   70 (171)
                      .|+.|+..|. ...|..|+++++  +++.|+ |+..+ ....|..|+. .|...+++.|..|+..+..          ..
T Consensus       455 ~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~-thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s  528 (567)
T PLN03086        455 HCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQA-STCPLRLITCRFCGDMVQAGGSAMDVRDRLR  528 (567)
T ss_pred             cCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhh-ccCCCCceeCCCCCCccccCccccchhhhhh
Confidence            4899999985 678999999986  889999 99765 6689999987 6888999999999998852          34


Q ss_pred             HHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHH
Q psy12258         71 SLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRI  106 (171)
Q Consensus        71 ~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~  106 (171)
                      .|..|.... +.+++.|..||+.+... .|..|+..
T Consensus       529 ~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        529 GMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             hHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHH
Confidence            788888875 88999999999888665 56667654

>PHA02768 hypothetical protein; Provisional

Probab=98.92  E-value=7e-10  Score=57.96  Aligned_cols=39  Identities=21%  Similarity=0.507  Sum_probs=18.7

Q ss_pred             eeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccCh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARK   69 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~   69 (171)
                      |.|+.||+.|....+|..|++. |.  ++++|..|++.|...
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~-H~--k~~kc~~C~k~f~~~   44 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRK-HN--TNLKLSNCKRISLRT   44 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHh-cC--CcccCCcccceeccc
Confidence            4455555555555555555542 33  344555555544433

>KOG3993|consensus

Probab=98.85  E-value=4.1e-10  Score=81.46  Aligned_cols=49  Identities=22%  Similarity=0.446  Sum_probs=30.5

Q ss_pred             CCCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhh
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKAS   49 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   49 (171)
                      +|..|...|.+...|.+|.-.-.--.-|.|+.|+++|+-..+|..|+++
T Consensus       269 iCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRW  317 (500)
T KOG3993|consen  269 ICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRW  317 (500)
T ss_pred             HHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcc
Confidence            3566666666666666664433333346677777777777777777665

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.80  E-value=3.1e-09  Score=47.57  Aligned_cols=25  Identities=56%  Similarity=1.003  Sum_probs=19.5

Q ss_pred             HHHHHHHHhcCCCCccCcccccccC
Q psy12258         99 YLQNHRRIHTGEKPHFCPVCNKMFR  123 (171)
Q Consensus        99 ~l~~H~~~h~~~~~~~C~~C~~~f~  123 (171)
                      +|.+|+++|++++||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4677888888888888888888775

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.78  E-value=4.4e-09  Score=47.08  Aligned_cols=25  Identities=48%  Similarity=1.015  Sum_probs=22.1

Q ss_pred             hHHHHHHHcCCCCCeeCCccchhcc
Q psy12258         14 ALKVHNRVHLGLKPYGCEVCGRHFR   38 (171)
Q Consensus        14 ~l~~H~~~h~~~~~~~C~~C~~~f~   38 (171)
                      +|..|+++|.+++||.|++|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4788999999999999999999885

...

>KOG3993|consensus

Probab=98.69  E-value=2.7e-09  Score=77.32  Aligned_cols=110  Identities=23%  Similarity=0.384  Sum_probs=71.9

Q ss_pred             eeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCcc---CccchhhcCCHHHHHHHH
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQ---CEFCHKAFRASSYLQNHR  104 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~---C~~C~~~~~~~~~l~~H~  104 (171)
                      |.|+.|...|.+...|.+|.. .......|+|+.|++.|+-..+|..|++.|....--.   -+.=.+........+.-.
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC-~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRC-PRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccC-CeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            899999999999999999976 4666677999999999999999999999884322100   000000000000000000


Q ss_pred             H--HhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        105 R--IHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       105 ~--~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +  ....+..|.|..|++.|.....|++|+-.|+..
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcc
Confidence            0  012244688888888888888888887766543

>PHA00616 hypothetical protein

Probab=98.57  E-value=4.8e-08  Score=48.64  Aligned_cols=33  Identities=21%  Similarity=0.242  Sum_probs=18.3

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      ||+|+.||+.|.....|..|++.|++++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            355555555555555555555555555555543

>PHA00616 hypothetical protein

Probab=98.52  E-value=4.9e-08  Score=48.61  Aligned_cols=30  Identities=20%  Similarity=0.406  Sum_probs=27.7

Q ss_pred             CccCcccccccCCchhHHHHHHHhccCccc
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNTHNVDARQ  141 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  141 (171)
                      ||.|+.||+.|..+++|.+|++.||+....
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            689999999999999999999999988654

>PHA00732 hypothetical protein

Probab=98.49  E-value=9e-08  Score=54.70  Aligned_cols=43  Identities=35%  Similarity=0.718  Sum_probs=20.8

Q ss_pred             ccCccchhhcCCHHHHHHHHHH-hcCCCCccCcccccccCCchhHHHHHH
Q psy12258         85 YQCEFCHKAFRASSYLQNHRRI-HTGEKPHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus        85 ~~C~~C~~~~~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      |.|..|++.|.+...|..|++. |.   ++.|+.||+.|.   .|..|++
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhc
Confidence            4455555555555555555542 32   134555555554   3444443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.47  E-value=3.4e-07  Score=48.63  Aligned_cols=50  Identities=28%  Similarity=0.606  Sum_probs=34.0

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcC--CCCccCcccccccCCchhHHHHHHHhc
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTG--EKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      .|.||.|++ ..+...|..|+...+.  .+.+.||+|...+.  .+|.+|+..+|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            367888888 4556677788766433  24578888887544  47888887765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.31  E-value=3.3e-07  Score=39.73  Aligned_cols=23  Identities=43%  Similarity=0.998  Sum_probs=18.3

Q ss_pred             ccCcccccccCCchhHHHHHHHh
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h  135 (171)
                      |.|+.|++.|.+...|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57888888888888888888764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.23  E-value=1.5e-06  Score=46.09  Aligned_cols=36  Identities=25%  Similarity=0.516  Sum_probs=16.4

Q ss_pred             eeCCccchhccCcccHHHhhhhcCCCC-Ccccccchhh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKASLHSDV-KAFQCEYCGK   64 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~~~h~~~-~~~~C~~C~~   64 (171)
                      |.|++|++. .+...|..|....|..+ +.+.|++|..
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~   39 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSS   39 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchh
Confidence            455555552 23344555554444432 2344555544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.17  E-value=1.1e-06  Score=38.25  Aligned_cols=24  Identities=42%  Similarity=1.072  Sum_probs=17.5

Q ss_pred             ccCcccccccCCchhHHHHHHHhc
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      |.|++|++.|.+...|..|++.||
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            578888888888888888887765

...

>PHA00732 hypothetical protein

Probab=98.15  E-value=1e-06  Score=50.39  Aligned_cols=17  Identities=35%  Similarity=0.585  Sum_probs=6.2

Q ss_pred             CCccchhccCcccHHHh
Q psy12258         30 CEVCGRHFRQWGDLKYH   46 (171)
Q Consensus        30 C~~C~~~f~~~~~l~~H   46 (171)
                      |+.|++.|.+...|..|
T Consensus         4 C~~Cgk~F~s~s~Lk~H   20 (79)
T PHA00732          4 CPICGFTTVTLFALKQH   20 (79)
T ss_pred             CCCCCCccCCHHHHHHH
Confidence            33333333333333333

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.02  E-value=2e-06  Score=38.79  Aligned_cols=26  Identities=31%  Similarity=0.607  Sum_probs=21.2

Q ss_pred             CccCcccccccCCchhHHHHHHHhcc
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      ||.|..|++.|.+...|..|++.|+.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57888888888888888888877753

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.93  E-value=5.1e-06  Score=49.86  Aligned_cols=24  Identities=38%  Similarity=0.891  Sum_probs=15.9

Q ss_pred             CccCcccccccCCchhHHHHHHHh
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~h  135 (171)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            467777777777777777777653

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.89  E-value=8.6e-06  Score=48.87  Aligned_cols=24  Identities=38%  Similarity=0.917  Sum_probs=14.4

Q ss_pred             CccCccchhhcCCHHHHHHHHHHh
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h  107 (171)
                      .+.|..|+..|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            456666666666666666666653

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.88  E-value=3.5e-06  Score=59.48  Aligned_cols=53  Identities=26%  Similarity=0.590  Sum_probs=44.0

Q ss_pred             CCCCccCcc--chhhcCCHHHHHHHHHHhc-------------------CCCCccCcccccccCCchhHHHHHH
Q psy12258         81 GERNYQCEF--CHKAFRASSYLQNHRRIHT-------------------GEKPHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus        81 ~~~~~~C~~--C~~~~~~~~~l~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      +++||+|++  |.+.|+..-.|..|+..-+                   ..+||+|++|+|.++....|.-|..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            358999987  9999999999999976422                   2479999999999999999988753

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.84  E-value=8.2e-06  Score=35.18  Aligned_cols=22  Identities=41%  Similarity=0.862  Sum_probs=13.3

Q ss_pred             ccCccchhhcCCHHHHHHHHHH
Q psy12258         85 YQCEFCHKAFRASSYLQNHRRI  106 (171)
Q Consensus        85 ~~C~~C~~~~~~~~~l~~H~~~  106 (171)
                      |.|+.|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3566666666666666666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.61  E-value=1.7e-05  Score=56.10  Aligned_cols=71  Identities=30%  Similarity=0.599  Sum_probs=48.4

Q ss_pred             CCCeeCCc--cchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHH
Q psy12258         25 LKPYGCEV--CGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQN  102 (171)
Q Consensus        25 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~  102 (171)
                      ++||+|++  |.+.+.+...|+.|+..-|-..+...-+          ....+.......|||+|.+|++.|+....|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhccCcccee
Confidence            58999987  9999999999999986433211111000          11122233445689999999999999988888


Q ss_pred             HHH
Q psy12258        103 HRR  105 (171)
Q Consensus       103 H~~  105 (171)
                      |..
T Consensus       417 Hr~  419 (423)
T COG5189         417 HRK  419 (423)
T ss_pred             ccc
Confidence            753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.60  E-value=4.1e-05  Score=33.09  Aligned_cols=23  Identities=48%  Similarity=0.973  Sum_probs=12.2

Q ss_pred             ccCccchhhcCCHHHHHHHHHHh
Q psy12258         85 YQCEFCHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        85 ~~C~~C~~~~~~~~~l~~H~~~h  107 (171)
                      |.|+.|+..|.+...|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34566666666666666665544

...

>smart00355 ZnF_C2H2 zinc finger

Probab=97.53  E-value=8.3e-05  Score=32.66  Aligned_cols=24  Identities=42%  Similarity=0.909  Sum_probs=16.4

Q ss_pred             ccCcccccccCCchhHHHHHHHhc
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      |.|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            467777777777777777776543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.44  E-value=4.8e-05  Score=34.09  Aligned_cols=21  Identities=33%  Similarity=0.890  Sum_probs=12.0

Q ss_pred             eeCCccchhccCcccHHHhhh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKA   48 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~   48 (171)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~   22 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKR   22 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHC
T ss_pred             CCCCccCCccCChhHHHHHhH
Confidence            455555555555555555554

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.44  E-value=8.2e-05  Score=32.34  Aligned_cols=23  Identities=39%  Similarity=0.778  Sum_probs=16.1

Q ss_pred             ccCcccccccCCchhHHHHHHHhc
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      |+|+.|+.... ...|.+|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            57888887777 778888887765

>KOG1146|consensus

Probab=97.43  E-value=0.0001  Score=61.29  Aligned_cols=102  Identities=22%  Similarity=0.306  Sum_probs=68.9

Q ss_pred             CCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcC
Q psy12258         30 CEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        30 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      |.-|+..+.+...+..|+...+...+.++|+.|++.+.....|..||+..+.+-.-  .+|. .+.....+.+-.....+
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~-~gq~~~~~arg~~~~~~  515 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCK-AGQNHPRLARGEVYRCP  515 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch--hHhH-hccccccccccccccCC
Confidence            44556666666666666666777778899999999999999999999875433221  3332 22222222222222345


Q ss_pred             CCCccCcccccccCCchhHHHHHHH
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLNT  134 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~  134 (171)
                      .++|.|..|..++.....|.+|+..
T Consensus       516 ~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  516 GKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             CCcccceeeeeeeecchHHHHHHHH
Confidence            6789999999999999999999864

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.13  E-value=0.00016  Score=36.92  Aligned_cols=30  Identities=30%  Similarity=0.825  Sum_probs=16.4

Q ss_pred             CCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        109 GEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       109 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      .+.|..|++|+..+.+.-+|++|+.+.|..
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcc
Confidence            355666777777777777777777666543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.13  E-value=0.0002  Score=31.38  Aligned_cols=23  Identities=30%  Similarity=0.912  Sum_probs=17.5

Q ss_pred             ccCcccccccCCchhHHHHHHHh
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h  135 (171)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56788888888888888887643

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.00  E-value=0.0009  Score=34.26  Aligned_cols=20  Identities=25%  Similarity=0.507  Sum_probs=6.4

Q ss_pred             cccchhhhccChHHHHHHHh
Q psy12258         58 QCEYCGKDFARKYSLVVHRR   77 (171)
Q Consensus        58 ~C~~C~~~~~~~~~l~~h~~   77 (171)
                      .|++|+..+....+|.+|+.
T Consensus        26 tCP~C~a~~~~srnLrRHle   45 (54)
T PF09237_consen   26 TCPICGAVIRQSRNLRRHLE   45 (54)
T ss_dssp             E-TTT--EESSHHHHHHHHH
T ss_pred             CCCcchhhccchhhHHHHHH
Confidence            33333333333333333333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.97  E-value=0.00086  Score=29.20  Aligned_cols=23  Identities=43%  Similarity=0.891  Sum_probs=15.7

Q ss_pred             ccCccchhhcCCHHHHHHHHHHh
Q psy12258         85 YQCEFCHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        85 ~~C~~C~~~~~~~~~l~~H~~~h  107 (171)
                      |.|..|++.|.....|..|+..|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45677777777777777776654

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.96  E-value=0.0042  Score=44.95  Aligned_cols=125  Identities=23%  Similarity=0.417  Sum_probs=79.6

Q ss_pred             cccccCChhhHHHHHHHcCCCCCeeCCccch---hccC------cccHHHhhhhcCCCCCc----ccccchhhhccChHH
Q psy12258          5 CGKSFFSSTALKVHNRVHLGLKPYGCEVCGR---HFRQ------WGDLKYHKASLHSDVKA----FQCEYCGKDFARKYS   71 (171)
Q Consensus         5 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~---~f~~------~~~l~~H~~~~h~~~~~----~~C~~C~~~~~~~~~   71 (171)
                      |..+...-..|..|.++.++.  +.|.+|-.   .|..      ...|..|... ...+..    -.|..|...|-+...
T Consensus       159 c~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~-G~~e~GFKGHP~C~FC~~~FYdDDE  235 (493)
T COG5236         159 CHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNG-GLEEEGFKGHPLCIFCKIYFYDDDE  235 (493)
T ss_pred             hhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccC-CccccCcCCCchhhhccceecChHH
Confidence            445555567788888876543  56777633   3332      3445555442 111112    259999999999999


Q ss_pred             HHHHHhhhcCCCCccCccchhh-------cCCHHHHHHHHHHhcCCCCccCcc--cc----cccCCchhHHHHHHHhccC
Q psy12258         72 LVVHRRIHTGERNYQCEFCHKA-------FRASSYLQNHRRIHTGEKPHFCPV--CN----KMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus        72 l~~h~~~~~~~~~~~C~~C~~~-------~~~~~~l~~H~~~h~~~~~~~C~~--C~----~~f~~~~~l~~H~~~h~~~  138 (171)
                      |..|++..+.    +|.+|+++       |.+..+|..|...    .-|.|.+  |.    ..|.+...|..|+-..|+.
T Consensus       236 L~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~----~hy~ct~qtc~~~k~~vf~~~~el~~h~~~~h~~  307 (493)
T COG5236         236 LRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRN----AHYCCTFQTCRVGKCYVFPYHTELLEHLTRFHKV  307 (493)
T ss_pred             HHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhc----CceEEEEEEEecCcEEEeccHHHHHHHHHHHhhc
Confidence            9999987653    56666653       6777778777653    3356643  22    4688889999998665544


Q ss_pred             cc
Q psy12258        139 AR  140 (171)
Q Consensus       139 ~~  140 (171)
                      ..
T Consensus       308 ~~  309 (493)
T COG5236         308 NA  309 (493)
T ss_pred             cc
Confidence            33

>PRK04860 hypothetical protein; Provisional

Probab=96.94  E-value=0.00031  Score=45.84  Aligned_cols=40  Identities=23%  Similarity=0.580  Sum_probs=33.7

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCch
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRS  126 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  126 (171)
                      -+|.|. |+.   ....+.+|.+++.++++|+|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            368998 986   6778889999999999999999999887543

>KOG2231|consensus

Probab=96.67  E-value=0.0067  Score=47.99  Aligned_cols=95  Identities=25%  Similarity=0.364  Sum_probs=61.7

Q ss_pred             cCChhhHHHHHHHcCCCCCeeCCccch---hc------cCcccHHHhhhhcCCCCC----cccccchhhhccChHHHHHH
Q psy12258          9 FFSSTALKVHNRVHLGLKPYGCEVCGR---HF------RQWGDLKYHKASLHSDVK----AFQCEYCGKDFARKYSLVVH   75 (171)
Q Consensus         9 f~~~~~l~~H~~~h~~~~~~~C~~C~~---~f------~~~~~l~~H~~~~h~~~~----~~~C~~C~~~~~~~~~l~~h   75 (171)
                      |.....|+.|+...+.  .+.|.+|-.   .|      -....|..|++.--.+++    .-.|..|...|.....|..|
T Consensus       124 ~~s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH  201 (669)
T KOG2231|consen  124 FKSVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRH  201 (669)
T ss_pred             hhHHHHHHHHHHHhhh--hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHh
Confidence            3367789999865443  345555432   22      234556677664222222    24689999999999999999


Q ss_pred             HhhhcCCCCccCccc------hhhcCCHHHHHHHHHHhcC
Q psy12258         76 RRIHTGERNYQCEFC------HKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C------~~~~~~~~~l~~H~~~h~~  109 (171)
                      ++..+    |.|..|      +..|.....|..|.+..|-
T Consensus       202 ~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~Hf  237 (669)
T KOG2231|consen  202 LRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHF  237 (669)
T ss_pred             hccce----eheeecCcccccchhcccchHHHHHhhhcCc
Confidence            98765    445555      4567888999999886543

>KOG2231|consensus

Probab=96.57  E-value=0.0048  Score=48.78  Aligned_cols=99  Identities=26%  Similarity=0.567  Sum_probs=59.7

Q ss_pred             CCccchhccCcccHHHhhhhcCCCCCcccccchh---hhcc------ChHHHHHHHhhhcC-CC----CccCccchhhcC
Q psy12258         30 CEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCG---KDFA------RKYSLVVHRRIHTG-ER----NYQCEFCHKAFR   95 (171)
Q Consensus        30 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~---~~~~------~~~~l~~h~~~~~~-~~----~~~C~~C~~~~~   95 (171)
                      |..| ..|.....|..|+...|..   +.|..|-   +.|.      +...|..|+..--. ..    .-.|..|...|.
T Consensus       118 ~~~c-~~~~s~~~Lk~H~~~~H~~---~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fl  193 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHMRDQHKL---HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFL  193 (669)
T ss_pred             Cccc-cchhHHHHHHHHHHHhhhh---hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhc
Confidence            4444 3444778899999877754   3333332   2222      33456666554321 11    346889999999


Q ss_pred             CHHHHHHHHHHhcCCCCccCcccc------cccCCchhHHHHHHHhc
Q psy12258         96 ASSYLQNHRRIHTGEKPHFCPVCN------KMFRVRSDMKRHLNTHN  136 (171)
Q Consensus        96 ~~~~l~~H~~~h~~~~~~~C~~C~------~~f~~~~~l~~H~~~h~  136 (171)
                      ....|.+|++.++    |.|..|.      .-|.....|..|.|.+|
T Consensus       194 d~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  194 DDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            9999999987543    3455552      33556667777776655

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.53  E-value=0.0016  Score=28.16  Aligned_cols=23  Identities=30%  Similarity=0.647  Sum_probs=12.1

Q ss_pred             ccCccchhhcCCHHHHHHHHHHhc
Q psy12258         85 YQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        85 ~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      |+|+.|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666555 556666665543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.11  E-value=0.0011  Score=29.66  Aligned_cols=22  Identities=27%  Similarity=0.896  Sum_probs=15.7

Q ss_pred             ccCcccccccCCchhHHHHHHH
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNT  134 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~  134 (171)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777643

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.03  E-value=0.0017  Score=28.98  Aligned_cols=21  Identities=29%  Similarity=0.654  Sum_probs=13.0

Q ss_pred             eeCCccchhccCcccHHHhhh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKA   48 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~   48 (171)
                      |.|..|++.|.+...+..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456666666666666666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.84  E-value=0.0072  Score=26.42  Aligned_cols=19  Identities=26%  Similarity=0.814  Sum_probs=11.1

Q ss_pred             cCcccccccCCchhHHHHHH
Q psy12258        114 FCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus       114 ~C~~C~~~f~~~~~l~~H~~  133 (171)
                      .|+.||+.| ..+.|.+|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            466666666 4555666654

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.65  E-value=0.0059  Score=44.21  Aligned_cols=103  Identities=27%  Similarity=0.521  Sum_probs=70.9

Q ss_pred             CeeCCc--cchhccCcccHHHhhhhcCCCCCcccccchh---hhcc------ChHHHHHHHhhhcCC----CCccCccch
Q psy12258         27 PYGCEV--CGRHFRQWGDLKYHKASLHSDVKAFQCEYCG---KDFA------RKYSLVVHRRIHTGE----RNYQCEFCH   91 (171)
Q Consensus        27 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~---~~~~------~~~~l~~h~~~~~~~----~~~~C~~C~   91 (171)
                      .|.|+.  |..+......|..|.+..|..   +.|..|-   +.|.      ....|..|...-..+    ..-.|..|.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~---~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~  227 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF---VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCK  227 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc---EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcc
Confidence            478875  777777778899999876654   4565554   3333      234455565433222    123689999


Q ss_pred             hhcCCHHHHHHHHHHhcCCCCccCcccccc-------cCCchhHHHHHHHhc
Q psy12258         92 KAFRASSYLQNHRRIHTGEKPHFCPVCNKM-------FRVRSDMKRHLNTHN  136 (171)
Q Consensus        92 ~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~  136 (171)
                      .-|-....|..|.+..+.    +|-+|+++       |.++.+|..|.+..|
T Consensus       228 ~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h  275 (493)
T COG5236         228 IYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH  275 (493)
T ss_pred             ceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc
Confidence            999999999999886433    67777755       778899999987544

>PRK04860 hypothetical protein; Provisional

Probab=95.50  E-value=0.0064  Score=39.75  Aligned_cols=38  Identities=24%  Similarity=0.699  Sum_probs=31.6

Q ss_pred             cccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCH
Q psy12258         56 AFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRAS   97 (171)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~   97 (171)
                      +|.|. |+.   ....+..|.+.+.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            58898 887   456788999999999999999999887644

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.09  E-value=0.0049  Score=46.53  Aligned_cols=139  Identities=24%  Similarity=0.401  Sum_probs=80.4

Q ss_pred             CCCccccccCChhhHHHHHH--HcCCC--CCeeCC--ccchhccCcccHHHhhhhcCCCCCcccccc--hhhhccChHH-
Q psy12258          1 MCDTCGKSFFSSTALKVHNR--VHLGL--KPYGCE--VCGRHFRQWGDLKYHKASLHSDVKAFQCEY--CGKDFARKYS-   71 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~~~~~~~-   71 (171)
                      +|..|...|.+...|..|.+  .|.++  +++.|+  .|++.|.....+..|.. .|....+..+..  +...+..... 
T Consensus       291 ~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  369 (467)
T COG5048         291 KSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHIL-LHTSISPAKEKLLNSSSKFSPLLNN  369 (467)
T ss_pred             CCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcc-cccCCCccccccccCccccccccCC
Confidence            35677788888888888888  78888  888888  68888888888888876 566655544433  2222111111 


Q ss_pred             ----HHHHHhhhcCCCCccCc--cchhhcCCHHHHHHHHHHhcCCC--CccCcccccccCCchhHHHHHHHhccCcc
Q psy12258         72 ----LVVHRRIHTGERNYQCE--FCHKAFRASSYLQNHRRIHTGEK--PHFCPVCNKMFRVRSDMKRHLNTHNVDAR  140 (171)
Q Consensus        72 ----l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  140 (171)
                          ...............+.  .|...+.....+..|...+....  .+.+..|.+.+.....+..|++.|.....
T Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (467)
T COG5048         370 EPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAP  446 (467)
T ss_pred             CCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCc
Confidence                00000111111222222  24444444444455544444433  45677788888888888777776654443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=95.03  E-value=0.0098  Score=31.00  Aligned_cols=25  Identities=24%  Similarity=0.372  Sum_probs=12.4

Q ss_pred             CCCccCccchhhcCCHHHHHHHHHH
Q psy12258         82 ERNYQCEFCHKAFRASSYLQNHRRI  106 (171)
Q Consensus        82 ~~~~~C~~C~~~~~~~~~l~~H~~~  106 (171)
                      +.-++||.|+..|...-++.+|+..
T Consensus        15 E~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          15 EEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             ceeeeCCchhHHHHHhHHHHHHhhH
Confidence            3344555555555555555555444

>KOG1146|consensus

Probab=94.85  E-value=0.014  Score=49.40  Aligned_cols=104  Identities=15%  Similarity=0.271  Sum_probs=58.0

Q ss_pred             eeCCccchhccCcccHHHhhhhcC---CCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHH
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKASLH---SDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHR  104 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~~~h---~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~  104 (171)
                      ..|+.|...|........+-...-   .....+.|..|++.+...-.+. ++-.   ...|.|..|...|.....|..|.
T Consensus      1229 l~~~~~e~~f~~~~~~~~~a~~~~~~~~~sGe~~c~~~~~~~~~~~~~~-~l~~---~~~~~~~~~~~~~~~~~~l~~~~ 1304 (1406)
T KOG1146|consen 1229 LLPNALEQPFPQEPEPTATAPPKPPELPASGEGECGAVDELLTPSFGIS-TLDV---THRYLCRQCKMAFDGEAPLTAHQ 1304 (1406)
T ss_pred             ccHHhhhcCccCcccccccCCCCCCcCcCCCcchhhhccccccCcccee-eccc---chhHHHHHHHhhhcchhHHHHHH
Confidence            345555666655555443322110   0112245555555555443333 2222   23455666666666666665554


Q ss_pred             HH-----------------hcCCCCccCcccccccCCchhHHHHHHHhc
Q psy12258        105 RI-----------------HTGEKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       105 ~~-----------------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      +.                 +....+| |..|...|.....|..|+++.+
T Consensus      1305 ~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm~~~~ 1352 (1406)
T KOG1146|consen 1305 RKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQIHMRSSA 1352 (1406)
T ss_pred             HHHHhccCccccCCCCcccCcccccc-chHHHhhcchhHHHHHHHHHhh
Confidence            32                 2233456 9999999999999999998743

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.64  E-value=0.012  Score=27.64  Aligned_cols=10  Identities=50%  Similarity=1.348  Sum_probs=5.5

Q ss_pred             CCccCccccc
Q psy12258        111 KPHFCPVCNK  120 (171)
Q Consensus       111 ~~~~C~~C~~  120 (171)
                      .++.|++||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4456666653

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=94.33  E-value=0.069  Score=32.59  Aligned_cols=83  Identities=16%  Similarity=0.227  Sum_probs=47.0

Q ss_pred             CCcccccchhhhccChHHHHHHHhhhcCCC-CccCccchhhcCCHHHHHHH-HHHh---cC---------CCCccC----
Q psy12258         54 VKAFQCEYCGKDFARKYSLVVHRRIHTGER-NYQCEFCHKAFRASSYLQNH-RRIH---TG---------EKPHFC----  115 (171)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~-~~~C~~C~~~~~~~~~l~~H-~~~h---~~---------~~~~~C----  115 (171)
                      .+.+.|..|...... +.+..|++..+... ...-..=...+.....+... ...-   ..         ..-|.|    
T Consensus         9 ~~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~   87 (109)
T PF12013_consen    9 YRVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDP   87 (109)
T ss_pred             CCEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCC
Confidence            455789999988776 78889988554322 11110000011000000000 0000   00         123899    


Q ss_pred             cccccccCCchhHHHHHHHhcc
Q psy12258        116 PVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       116 ~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      ..|+..+.+...+++|++.+|+
T Consensus        88 ~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   88 PHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCCcEeccHHHHHHHHHHhcC
Confidence            9999999999999999998874

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.21  E-value=0.031  Score=26.34  Aligned_cols=22  Identities=27%  Similarity=0.683  Sum_probs=18.4

Q ss_pred             CccCcccccccCCchhHHHHHH
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      +|.|..|++.|.+...+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5789999999998888888874

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=94.18  E-value=0.027  Score=29.37  Aligned_cols=29  Identities=41%  Similarity=0.752  Sum_probs=22.5

Q ss_pred             cCCCCccCcccccccCCchhHHHHHHHhc
Q psy12258        108 TGEKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       108 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      -++..++|+.||..|....++.+|....|
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            46677888888888888888888876544

>KOG2482|consensus

Probab=94.08  E-value=0.067  Score=38.89  Aligned_cols=107  Identities=21%  Similarity=0.362  Sum_probs=64.7

Q ss_pred             CeeCCccchhccCcccHHHhhhhc-CCCCCc----c-cccchhhhccChHHHHHHH----hhh--c-------------C
Q psy12258         27 PYGCEVCGRHFRQWGDLKYHKASL-HSDVKA----F-QCEYCGKDFARKYSLVVHR----RIH--T-------------G   81 (171)
Q Consensus        27 ~~~C~~C~~~f~~~~~l~~H~~~~-h~~~~~----~-~C~~C~~~~~~~~~l~~h~----~~~--~-------------~   81 (171)
                      .+.|-+|.+.|.+...|+.||+.. |.+..|    | +--.-+..-..++....|.    ..-  .             +
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC
Confidence            378999999999999999999863 332222    1 0000111001111111111    110  0             1


Q ss_pred             CCC--ccCccchhhcCCHHHHHHHHHHhcC---------------------------CCCccCcccccccCCchhHHHHH
Q psy12258         82 ERN--YQCEFCHKAFRASSYLQNHRRIHTG---------------------------EKPHFCPVCNKMFRVRSDMKRHL  132 (171)
Q Consensus        82 ~~~--~~C~~C~~~~~~~~~l~~H~~~h~~---------------------------~~~~~C~~C~~~f~~~~~l~~H~  132 (171)
                      ..+  .+|-.|...+.....|..|+...+.                           .....|-.|...|.....|..||
T Consensus       275 a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  275 AEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             CCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence            112  5788898888888888888876442                           11246888999999999999998


Q ss_pred             H
Q psy12258        133 N  133 (171)
Q Consensus       133 ~  133 (171)
                      -
T Consensus       355 ~  355 (423)
T KOG2482|consen  355 V  355 (423)
T ss_pred             c
Confidence            4

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.88  E-value=0.031  Score=26.34  Aligned_cols=22  Identities=18%  Similarity=0.415  Sum_probs=13.9

Q ss_pred             CeeCCccchhccCcccHHHhhh
Q psy12258         27 PYGCEVCGRHFRQWGDLKYHKA   48 (171)
Q Consensus        27 ~~~C~~C~~~f~~~~~l~~H~~   48 (171)
                      +|.|++|+..|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4566666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=93.69  E-value=0.049  Score=36.69  Aligned_cols=47  Identities=28%  Similarity=0.634  Sum_probs=33.3

Q ss_pred             eeCCc--cchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhh
Q psy12258         28 YGCEV--CGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRI   78 (171)
Q Consensus        28 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~   78 (171)
                      +.|++  |...|.+......|....|..    .|.+|.+.|++...|..|+..
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs~C~r~~Pt~hLLd~HI~E  128 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN----SCSFCKRAFPTGHLLDAHILE  128 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc----hhHHHHHhCCchhhhhHHHHH
Confidence            66765  777777777777776655543    688888888887777777654

>KOG4173|consensus

Probab=93.67  E-value=0.17  Score=34.15  Aligned_cols=79  Identities=29%  Similarity=0.559  Sum_probs=59.9

Q ss_pred             CCcccccc--hhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhc----------CCCCccC--cccc
Q psy12258         54 VKAFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHT----------GEKPHFC--PVCN  119 (171)
Q Consensus        54 ~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~----------~~~~~~C--~~C~  119 (171)
                      .+.+.|.+  |-..|.+...+..|...-++.   .|..|.+.|.....|..|+.-.+          |..-|.|  ..|+
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt  153 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCT  153 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhh
Confidence            34467876  777888877777777655442   69999999999999999976433          3455888  5599


Q ss_pred             cccCCchhHHHHHH-Hh
Q psy12258        120 KMFRVRSDMKRHLN-TH  135 (171)
Q Consensus       120 ~~f~~~~~l~~H~~-~h  135 (171)
                      ..|.+...-..|+- +|
T Consensus       154 ~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  154 EKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhhHHHHhc
Confidence            99999999889974 44

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=93.43  E-value=0.038  Score=33.65  Aligned_cols=30  Identities=33%  Similarity=0.843  Sum_probs=17.1

Q ss_pred             eeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccCh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARK   69 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~   69 (171)
                      ..|+.||..|.   .|.         ..|..|+.||..|...
T Consensus        10 R~Cp~CG~kFY---DLn---------k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFY---DLN---------KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhc---cCC---------CCCccCCCCCCccCcc
Confidence            35777777662   211         2456677777666654

The function of members of this family is unknown.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.10  E-value=0.15  Score=31.07  Aligned_cols=83  Identities=17%  Similarity=0.274  Sum_probs=48.2

Q ss_pred             CCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHH-H--Hhhhc-C---------CCCccC----c
Q psy12258         26 KPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVV-H--RRIHT-G---------ERNYQC----E   88 (171)
Q Consensus        26 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~-h--~~~~~-~---------~~~~~C----~   88 (171)
                      +-..|..|+..... ..+..|++..|..........-...+.....|.. .  +.... .         -.-|.|    .
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~   88 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPP   88 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCC
Confidence            45789999988766 8899999865643322111111111111110100 0  00000 0         123889    9


Q ss_pred             cchhhcCCHHHHHHHHHHhcC
Q psy12258         89 FCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        89 ~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      .|+....+...+..|++.+++
T Consensus        89 ~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   89 HCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCcEeccHHHHHHHHHHhcC
Confidence            999999999999999998764

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=92.43  E-value=0.053  Score=37.41  Aligned_cols=41  Identities=32%  Similarity=0.599  Sum_probs=19.8

Q ss_pred             CCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHH
Q psy12258         30 CEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVH   75 (171)
Q Consensus        30 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h   75 (171)
                      |=+|.+-|.++.-|++|++.     +.|+|.+|.+-+.+--.|..|
T Consensus        13 cwycnrefddekiliqhqka-----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA-----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh-----ccceeeeehhhhccCCCceee
Confidence            44555555555555555542     235555555443333334443

>KOG2482|consensus

Probab=92.16  E-value=0.4  Score=35.09  Aligned_cols=110  Identities=18%  Similarity=0.271  Sum_probs=61.1

Q ss_pred             CeeCCccchhc-cCcccHHHhhhhcCCCC---------------------CcccccchhhhccChHHHHHHHhhhc-CCC
Q psy12258         27 PYGCEVCGRHF-RQWGDLKYHKASLHSDV---------------------KAFQCEYCGKDFARKYSLVVHRRIHT-GER   83 (171)
Q Consensus        27 ~~~C~~C~~~f-~~~~~l~~H~~~~h~~~---------------------~~~~C~~C~~~~~~~~~l~~h~~~~~-~~~   83 (171)
                      +..|-.|...+ .+++....|+-..|.-.                     ..+.|-.|.+.|.++..|..||+... .+-
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrri  223 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRRI  223 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCccc
Confidence            45677775543 34566677766555321                     23688899999999999999987532 111


Q ss_pred             CccCccchh------hcCCHHHHHHHHHH----h--c-------------CCCC--ccCcccccccCCchhHHHHHHHhc
Q psy12258         84 NYQCEFCHK------AFRASSYLQNHRRI----H--T-------------GEKP--HFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus        84 ~~~C~~C~~------~~~~~~~l~~H~~~----h--~-------------~~~~--~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      .-+-.+-++      .-..++....|...    .  .             +..+  .+|-.|.........|..||+..|
T Consensus       224 nPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~vH  303 (423)
T KOG2482|consen  224 NPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKIVH  303 (423)
T ss_pred             CCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHHHH
Confidence            111111111      00011111111111    0  0             1112  589999999888999999997644

>TIGR00622 ssl1 transcription factor ssl1

Probab=91.73  E-value=0.15  Score=31.09  Aligned_cols=92  Identities=23%  Similarity=0.306  Sum_probs=47.1

Q ss_pred             CCCeeCCccchhccCcccHHHhhhhcCC-CCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHH
Q psy12258         25 LKPYGCEVCGRHFRQWGDLKYHKASLHS-DVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNH  103 (171)
Q Consensus        25 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~-~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H  103 (171)
                      +-|..|+.|+-+.-+...|.+...  |- ..++|.=.      .  +        ........|..|...|........ 
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSyH--HLfPl~~f~ev------~--~--------~~~~~~~~C~~C~~~f~~~~~~~~-   73 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSYH--HLFPLKAFQEI------P--L--------EEYNGSRFCFGCQGPFPKPPVSPF-   73 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhhh--ccCCCcccccc------c--c--------cccCCCCcccCcCCCCCCcccccc-
Confidence            346677777777777777776542  21 11222100      0  0        000111237777776654321100 


Q ss_pred             HHHhcCCCCccCcccccccCCchhHHHHHHHhc
Q psy12258        104 RRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       104 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                       ..-.....|+|+.|...|-..-++..|...|+
T Consensus        74 -~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        74 -DELKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             -cccccccceeCCCCCCccccccchhhhhhccC
Confidence             00122345778888888877777777766665

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>TIGR00622 ssl1 transcription factor ssl1

Probab=91.06  E-value=0.2  Score=30.57  Aligned_cols=18  Identities=33%  Similarity=0.591  Sum_probs=12.4

Q ss_pred             CCCccccccCChhhHHHH
Q psy12258          1 MCDTCGKSFFSSTALKVH   18 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H   18 (171)
                      .|++|+...-....|.+-
T Consensus        17 ~CpiCgLtLVss~HLARS   34 (112)
T TIGR00622        17 ECPICGLTLILSTHLARS   34 (112)
T ss_pred             cCCcCCCEEeccchHHHh
Confidence            478888877666666553

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=90.51  E-value=0.15  Score=22.45  Aligned_cols=10  Identities=40%  Similarity=0.929  Sum_probs=7.1

Q ss_pred             eCCccchhcc
Q psy12258         29 GCEVCGRHFR   38 (171)
Q Consensus        29 ~C~~C~~~f~   38 (171)
                      .|+.||..|.
T Consensus        16 ~Cp~CG~~F~   25 (26)
T PF10571_consen   16 FCPHCGYDFE   25 (26)
T ss_pred             cCCCCCCCCc
Confidence            5777877764

Several members are annotated as putative helicases.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=90.49  E-value=0.17  Score=26.93  Aligned_cols=9  Identities=44%  Similarity=1.195  Sum_probs=5.1

Q ss_pred             CCccCcccc
Q psy12258        111 KPHFCPVCN  119 (171)
Q Consensus       111 ~~~~C~~C~  119 (171)
                      .+|+|+.||
T Consensus        49 ~~Y~Cp~CG   57 (61)
T COG2888          49 NPYRCPKCG   57 (61)
T ss_pred             CceECCCcC
Confidence            455666555

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=90.16  E-value=0.16  Score=27.04  Aligned_cols=9  Identities=44%  Similarity=1.231  Sum_probs=5.5

Q ss_pred             CCccCcccc
Q psy12258        111 KPHFCPVCN  119 (171)
Q Consensus       111 ~~~~C~~C~  119 (171)
                      .+|+|+.||
T Consensus        47 ~~Y~CP~CG   55 (59)
T PRK14890         47 NPYTCPKCG   55 (59)
T ss_pred             CceECCCCC
Confidence            456666666

>PHA00626 hypothetical protein

Probab=89.82  E-value=0.075  Score=27.84  Aligned_cols=15  Identities=13%  Similarity=0.104  Sum_probs=10.8

Q ss_pred             CCCccCcccccccCC
Q psy12258        110 EKPHFCPVCNKMFRV  124 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~  124 (171)
                      ...|+|+.||..|+.
T Consensus        21 snrYkCkdCGY~ft~   35 (59)
T PHA00626         21 SDDYVCCDCGYNDSK   35 (59)
T ss_pred             CcceEcCCCCCeech
Confidence            356888888877753

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=89.73  E-value=0.037  Score=35.94  Aligned_cols=12  Identities=33%  Similarity=0.728  Sum_probs=6.1

Q ss_pred             ccCcccccccCC
Q psy12258        113 HFCPVCNKMFRV  124 (171)
Q Consensus       113 ~~C~~C~~~f~~  124 (171)
                      ++|+.||+.|..
T Consensus        29 ~~c~~c~~~f~~   40 (154)
T PRK00464         29 RECLACGKRFTT   40 (154)
T ss_pred             eeccccCCcceE
Confidence            455555555543

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=89.65  E-value=0.11  Score=24.44  Aligned_cols=8  Identities=50%  Similarity=1.613  Sum_probs=4.1

Q ss_pred             CccCcccc
Q psy12258        112 PHFCPVCN  119 (171)
Q Consensus       112 ~~~C~~C~  119 (171)
                      |..|++||
T Consensus        18 p~~CP~Cg   25 (34)
T cd00729          18 PEKCPICG   25 (34)
T ss_pred             CCcCcCCC
Confidence            34555555

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2893|consensus

Probab=89.11  E-value=0.085  Score=36.45  Aligned_cols=35  Identities=29%  Similarity=0.904  Sum_probs=16.6

Q ss_pred             ccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCH
Q psy12258         59 CEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRAS   97 (171)
Q Consensus        59 C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~   97 (171)
                      |=+|++.|.+..-|..|++.    +.|+|.+|.+.+-+-
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sg   47 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSG   47 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccC
Confidence            44455555555555544443    234555555444333

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=88.82  E-value=0.16  Score=24.47  Aligned_cols=8  Identities=38%  Similarity=1.028  Sum_probs=3.1

Q ss_pred             ccCccccc
Q psy12258        113 HFCPVCNK  120 (171)
Q Consensus       113 ~~C~~C~~  120 (171)
                      .+|+.|+.
T Consensus        26 vrC~~C~~   33 (37)
T PF13719_consen   26 VRCPKCGH   33 (37)
T ss_pred             EECCCCCc
Confidence            33444433

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.73  E-value=0.13  Score=38.84  Aligned_cols=58  Identities=36%  Similarity=0.646  Sum_probs=48.6

Q ss_pred             CCccCccchhhcCCHHHHHHHHH--HhcCC--CCccCc--ccccccCCchhHHHHHHHhccCcc
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRR--IHTGE--KPHFCP--VCNKMFRVRSDMKRHLNTHNVDAR  140 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  140 (171)
                      .++.|..|...|.....+..|.+  .|.++  +++.|+  .|++.|.+...+..|...|.....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP  351 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCc
Confidence            35788889999999999999998  78888  899998  799999999988888887765543

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=88.39  E-value=0.24  Score=30.84  Aligned_cols=30  Identities=23%  Similarity=0.464  Sum_probs=19.8

Q ss_pred             eeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccCh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARK   69 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~   69 (171)
                      ..|+.||..|..   |         +..|..|+.|+..+...
T Consensus        10 r~Cp~cg~kFYD---L---------nk~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        10 RICPNTGSKFYD---L---------NRRPAVSPYTGEQFPPE   39 (129)
T ss_pred             ccCCCcCccccc---c---------CCCCccCCCcCCccCcc
Confidence            468888888722   2         13467788888876654

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>KOG2186|consensus

Probab=86.94  E-value=0.39  Score=33.60  Aligned_cols=46  Identities=30%  Similarity=0.673  Sum_probs=26.6

Q ss_pred             eeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRR   77 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~   77 (171)
                      |.|+.||....-.. +-.|+.. .++ .-|.|..|+..|.. ..+..|..
T Consensus         4 FtCnvCgEsvKKp~-vekH~sr-Crn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKPQ-VEKHMSR-CRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhccccc-hHHHHHh-ccC-CeeEEeeccccccc-chhhhhhh
Confidence            66777777655443 4446652 332 55677777777776 34455543

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=86.89  E-value=0.26  Score=23.55  Aligned_cols=6  Identities=33%  Similarity=1.049  Sum_probs=2.2

Q ss_pred             cCcccc
Q psy12258        114 FCPVCN  119 (171)
Q Consensus       114 ~C~~C~  119 (171)
                      +|+.|+
T Consensus        27 ~C~~C~   32 (36)
T PF13717_consen   27 RCSKCG   32 (36)
T ss_pred             ECCCCC
Confidence            333333

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=86.80  E-value=0.24  Score=34.74  Aligned_cols=80  Identities=21%  Similarity=0.464  Sum_probs=47.0

Q ss_pred             CCcccccchhhhccChHHHHHHHhhh--cCCCCccCccchhhcCCHHHH-------HHHHHH----hcCCCCccCccccc
Q psy12258         54 VKAFQCEYCGKDFARKYSLVVHRRIH--TGERNYQCEFCHKAFRASSYL-------QNHRRI----HTGEKPHFCPVCNK  120 (171)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h~~~~--~~~~~~~C~~C~~~~~~~~~l-------~~H~~~----h~~~~~~~C~~C~~  120 (171)
                      -+.|.|..|+..+-....+. |+..-  .....|+|..|++.-.+. -|       ..|++.    ....+++.||+||.
T Consensus       140 Grif~CsfC~~flCEDDQFE-HQAsCQvLe~E~~KC~SCNrlGq~s-CLRCK~cfCddHvrrKg~ky~k~k~~PCPKCg~  217 (314)
T PF06524_consen  140 GRIFKCSFCDNFLCEDDQFE-HQASCQVLESETFKCQSCNRLGQYS-CLRCKICFCDDHVRRKGFKYEKGKPIPCPKCGY  217 (314)
T ss_pred             CeEEEeecCCCeeeccchhh-hhhhhhhhhcccccccccccccchh-hhheeeeehhhhhhhcccccccCCCCCCCCCCC
Confidence            45688888887555444433 33221  223467777776543222 11       134332    23468899999999


Q ss_pred             ccCCchhHHHHHHHh
Q psy12258        121 MFRVRSDMKRHLNTH  135 (171)
Q Consensus       121 ~f~~~~~l~~H~~~h  135 (171)
                      .......|..-.|.|
T Consensus       218 et~eTkdLSmStR~h  232 (314)
T PF06524_consen  218 ETQETKDLSMSTRSH  232 (314)
T ss_pred             cccccccceeeeecc
Confidence            888777776666655

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=86.66  E-value=0.32  Score=31.99  Aligned_cols=24  Identities=38%  Similarity=1.077  Sum_probs=18.2

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcCCCCccCccccc
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNK  120 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~  120 (171)
                      -|.|++||..             +.++-|-+||+||.
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCga  157 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICGA  157 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCCC
Confidence            5899999854             34577889999983

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=86.41  E-value=0.26  Score=24.72  Aligned_cols=10  Identities=30%  Similarity=0.747  Sum_probs=5.1

Q ss_pred             ccCccchhhc
Q psy12258         85 YQCEFCHKAF   94 (171)
Q Consensus        85 ~~C~~C~~~~   94 (171)
                      |.|..||..|
T Consensus         3 Y~C~~Cg~~~   12 (44)
T smart00659        3 YICGECGREN   12 (44)
T ss_pred             EECCCCCCEe
Confidence            4455555544

present in RNA polymerase I, II and III

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=86.21  E-value=0.13  Score=35.53  Aligned_cols=40  Identities=30%  Similarity=0.561  Sum_probs=23.4

Q ss_pred             CCCccccccCChhhHHHHHHHcC----------CCCC-----eeCCccchhccCc
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHL----------GLKP-----YGCEVCGRHFRQW   40 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~----------~~~~-----~~C~~C~~~f~~~   40 (171)
                      .||+|+..|.+..-.....+.-.          +..|     ..|+.||..+...
T Consensus         7 ~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    7 TCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             ECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            48999998887765444433211          1111     5678887766544

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=86.17  E-value=0.49  Score=22.69  Aligned_cols=14  Identities=29%  Similarity=0.591  Sum_probs=7.3

Q ss_pred             eeCCccchhccCcc
Q psy12258         28 YGCEVCGRHFRQWG   41 (171)
Q Consensus        28 ~~C~~C~~~f~~~~   41 (171)
                      +.|+.|+..|.-..
T Consensus         3 ~~CP~C~~~~~v~~   16 (38)
T TIGR02098         3 IQCPNCKTSFRVVD   16 (38)
T ss_pred             EECCCCCCEEEeCH
Confidence            34666666554443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>KOG2785|consensus

Probab=85.87  E-value=0.66  Score=34.47  Aligned_cols=21  Identities=19%  Similarity=0.570  Sum_probs=13.2

Q ss_pred             eeCCccchhccCcccHHHhhh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKA   48 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~   48 (171)
                      |+|.-|...|........|++
T Consensus         4 ftC~tC~v~F~~ad~Qr~HyK   24 (390)
T KOG2785|consen    4 FTCNTCNVEFDDADEQRAHYK   24 (390)
T ss_pred             ceeeceeeeeccHHHHHHHhh
Confidence            566666666666665555654

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=85.79  E-value=0.24  Score=34.15  Aligned_cols=45  Identities=22%  Similarity=0.424  Sum_probs=28.1

Q ss_pred             CCCeeCCccchhccCcccHHHhhhhcC---------CCCCc-----ccccchhhhccCh
Q psy12258         25 LKPYGCEVCGRHFRQWGDLKYHKASLH---------SDVKA-----FQCEYCGKDFARK   69 (171)
Q Consensus        25 ~~~~~C~~C~~~f~~~~~l~~H~~~~h---------~~~~~-----~~C~~C~~~~~~~   69 (171)
                      ++...||+|+..|....-.....+...         .+..|     +.|+.||.++...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            456899999999987754443333211         12223     5789998776643

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=85.50  E-value=0.69  Score=30.32  Aligned_cols=36  Identities=19%  Similarity=0.401  Sum_probs=26.4

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFR  123 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  123 (171)
                      .....-|.|+.|+..|+....+.         ..|.|+.||....
T Consensus       104 e~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       104 ETNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAMLD  139 (158)
T ss_pred             ccCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEee
Confidence            34456688988988888777774         2588999987654

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=84.88  E-value=0.11  Score=25.36  Aligned_cols=10  Identities=50%  Similarity=1.271  Sum_probs=4.9

Q ss_pred             ccCccchhhc
Q psy12258         85 YQCEFCHKAF   94 (171)
Q Consensus        85 ~~C~~C~~~~   94 (171)
                      |+|+.||..|
T Consensus         6 y~C~~Cg~~f   15 (41)
T smart00834        6 YRCEDCGHTF   15 (41)
T ss_pred             EEcCCCCCEE
Confidence            4455555444

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=84.18  E-value=1  Score=19.76  Aligned_cols=18  Identities=17%  Similarity=0.469  Sum_probs=9.6

Q ss_pred             CCccccccCChhhHHHHHH
Q psy12258          2 CDTCGKSFFSSTALKVHNR   20 (171)
Q Consensus         2 C~~C~~~f~~~~~l~~H~~   20 (171)
                      ||+|+..+ ....+..|+.
T Consensus         4 CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        4 CPVCFREV-PENLINSHLD   21 (26)
T ss_pred             CCCCcCcc-cHHHHHHHHH
Confidence            66666655 3444555543

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=84.13  E-value=0.7  Score=30.30  Aligned_cols=16  Identities=19%  Similarity=0.233  Sum_probs=7.1

Q ss_pred             cccccchhhhccChHH
Q psy12258         56 AFQCEYCGKDFARKYS   71 (171)
Q Consensus        56 ~~~C~~C~~~~~~~~~   71 (171)
                      -|.|+.|+..|+...+
T Consensus       109 ~Y~Cp~c~~r~tf~eA  124 (158)
T TIGR00373       109 FFICPNMCVRFTFNEA  124 (158)
T ss_pred             eEECCCCCcEeeHHHH
Confidence            3444444444444333

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=83.09  E-value=0.92  Score=22.57  Aligned_cols=25  Identities=36%  Similarity=0.728  Sum_probs=14.5

Q ss_pred             CCCccCcccccccCC----chhHHHHHHH
Q psy12258        110 EKPHFCPVCNKMFRV----RSDMKRHLNT  134 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~----~~~l~~H~~~  134 (171)
                      ....+|..|++.+..    .+.|.+|++.
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            445678888877765    3678888743

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF14353 CpXC: CpXC protein

Probab=82.90  E-value=0.52  Score=29.60  Aligned_cols=47  Identities=32%  Similarity=0.533  Sum_probs=29.9

Q ss_pred             CCCccccccCChhh----------HHHHHHHcCCCCCeeCCccchhccCcccHHHhhh
Q psy12258          1 MCDTCGKSFFSSTA----------LKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKA   48 (171)
Q Consensus         1 ~C~~C~~~f~~~~~----------l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   48 (171)
                      .||.|+..|...-.          |+.-+. --.-..+.|+.||..|.-...+..|..
T Consensus         3 tCP~C~~~~~~~v~~~I~~~~~p~l~e~il-~g~l~~~~CP~Cg~~~~~~~p~lY~D~   59 (128)
T PF14353_consen    3 TCPHCGHEFEFEVWTSINADEDPELKEKIL-DGSLFSFTCPSCGHKFRLEYPLLYHDP   59 (128)
T ss_pred             CCCCCCCeeEEEEEeEEcCcCCHHHHHHHH-cCCcCEEECCCCCCceecCCCEEEEcC
Confidence            48889887654432          222222 111235889999999988888777765

>smart00531 TFIIE Transcription initiation factor IIE

Probab=82.51  E-value=1.2  Score=28.73  Aligned_cols=15  Identities=20%  Similarity=0.494  Sum_probs=8.8

Q ss_pred             CCCeeCCccchhccC
Q psy12258         25 LKPYGCEVCGRHFRQ   39 (171)
Q Consensus        25 ~~~~~C~~C~~~f~~   39 (171)
                      ...|.|+.|+..|..
T Consensus        97 ~~~Y~Cp~C~~~y~~  111 (147)
T smart00531       97 NAYYKCPNCQSKYTF  111 (147)
T ss_pred             CcEEECcCCCCEeeH
Confidence            345666666666654

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=81.86  E-value=0.19  Score=26.08  Aligned_cols=11  Identities=36%  Similarity=1.086  Sum_probs=5.5

Q ss_pred             ccCccchhhcC
Q psy12258         85 YQCEFCHKAFR   95 (171)
Q Consensus        85 ~~C~~C~~~~~   95 (171)
                      |+|..|+..|.
T Consensus         6 y~C~~Cg~~fe   16 (52)
T TIGR02605         6 YRCTACGHRFE   16 (52)
T ss_pred             EEeCCCCCEeE
Confidence            44555555443

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>PF08274 PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR013987 The PhnA protein family includes the uncharacterised Escherichia coli protein PhnA and its homologues

Probab=81.85  E-value=0.46  Score=21.67  Aligned_cols=24  Identities=21%  Similarity=0.742  Sum_probs=9.4

Q ss_pred             cCccchhhcCCHHHHHHHHHHhcCCCCccCccccc
Q psy12258         86 QCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNK  120 (171)
Q Consensus        86 ~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~  120 (171)
                      +|+.|+..+..           .....+.|+.|+.
T Consensus         4 ~Cp~C~se~~y-----------~D~~~~vCp~C~~   27 (30)
T PF08274_consen    4 KCPLCGSEYTY-----------EDGELLVCPECGH   27 (30)
T ss_dssp             --TTT-----E-----------E-SSSEEETTTTE
T ss_pred             CCCCCCCccee-----------ccCCEEeCCcccc
Confidence            46666655544           3345566666664

The E. coli phnA gene is part of a large operon associated with alkylphosphonate uptake and carbon-phosphorus bond cleavage []. The protein is not related to the characterised phosphonoacetate hydrolase designated PhnA []. This entry represents the N-terminal domain of PhnA, which is predicted to form a zinc-ribbon.; PDB: 2AKL_A.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=81.60  E-value=0.89  Score=30.46  Aligned_cols=35  Identities=23%  Similarity=0.550  Sum_probs=25.8

Q ss_pred             CCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCC
Q psy12258         81 GERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRV  124 (171)
Q Consensus        81 ~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  124 (171)
                      ...-|.|+.|+..|+....+.         ..|.|+.||-....
T Consensus       114 ~~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        114 NNMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLEE  148 (178)
T ss_pred             CCCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCee
Confidence            345688999998887777653         35899999976553

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=80.65  E-value=1  Score=30.17  Aligned_cols=14  Identities=21%  Similarity=0.292  Sum_probs=6.5

Q ss_pred             CeeCCccchhccCc
Q psy12258         27 PYGCEVCGRHFRQW   40 (171)
Q Consensus        27 ~~~C~~C~~~f~~~   40 (171)
                      -|.|+.|+..|+..
T Consensus       117 ~Y~Cp~C~~rytf~  130 (178)
T PRK06266        117 FFFCPNCHIRFTFD  130 (178)
T ss_pred             EEECCCCCcEEeHH
Confidence            34455555444433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	171
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-27
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-17
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-15
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		3e-14
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		6e-14
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		4e-06
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-13
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		9e-13
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-12
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-12
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-12
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-12
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-12
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-12
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-12
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-12
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-11
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		4e-11
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-11
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		9e-11
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		3e-10
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		7e-10
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		9e-10
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-08
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-08
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-07
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-08
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-07
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		2e-08
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		7e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-07
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		5e-07
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		1e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		3e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		5e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		7e-06
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		1e-05
2ep0_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-05
2em6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		5e-05
2ena_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-05
2emw_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-05
2emw_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2eor_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-05
2ene_A	46	Solution Structure Of The C2h2 Type Zinc Finger (re		8e-05
2eog_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2ytp_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2eq1_A	46	Solution Structure Of The 9th C2h2 Type Zinc Finger		2e-04
2epu_A	45	Solution Structure Of The Secound C2h2 Type Zinc Fi		2e-04
2eon_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		3e-04
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		3e-04
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2yth_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2emk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2yta_A	41	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-04
2dlk_A	79	Solution Structure Of The First And The Second Zf-C		6e-04
2em2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2eq2_A	46	Solution Structure Of The 16th C2h2 Type Zinc Finge		7e-04
2ysv_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		7e-04
2emf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2eoe_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		9e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 1   MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCE 60
            C  CGKSF  S  L  H R H G KPY C  CG+ F    DL  H+ + H+  K ++C 
Sbjct: 23  ACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT-HTGEKPYKCP 81
Query: 61  YCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNK 120
            CGK F+++ +L  H+R HTGE+ Y C  C K+F   ++L+ H+R HTGEKP+ CP C K
Sbjct: 82  ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141
Query: 121 MFRVRSDMKRHLNTHNVD 138
            F    ++  H  TH  +
Sbjct: 142 SFSREDNLHTHQRTHTGE 159

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 51/82 (62%)
Query: 55  KAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHF 114
           K ++C  CGK F++  +L  H+R HTGE+ Y+C  C K+F  SS LQ H+R HTGEKP+ 
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 115 CPVCNKMFRVRSDMKRHLNTHN 136
           CP C K F     + RH  TH 
Sbjct: 63  CPECGKSFSRSDHLSRHQRTHQ 84

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 55  KAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHF 114
           K F C++CG+ F + Y+L++H R HT ER Y C+ CHKAFR   +L++HR IH+ EKP  
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK 75
Query: 115 CPVCNKMF 122
           C  C K F
Sbjct: 76  CQECGKGF 83

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKAS--LHSDVKAFQC 59
           C TC K F S   LKVHNR H G KP+ C  CG+ + +  +L  H+A   ++   + F C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHR-RIHTG 109
             C + F R+  L +H   HTGE  Y+C  C + F     LQ+H  ++H+G
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 52  SDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKA-FRASSYLQNHRR--IHT 108
           S     +C  C K F  KY L VH R HTGE+ ++C  C K  FR  + L++  R  ++ 
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 109 GEKPHFCPVCNKMFRVRSDMKRHLNTHN 136
            E+   C VC + FR R +++ H+ +H 
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHT 90

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 28  YGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           + C++CG+ F++   L  H   +HSD + + C+YCGK F +K  +  H  IHTGE+ ++C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 88  EFCHKAFRASSYLQNHRRIHTG 109
           + C KAF  SS L  H R HTG
Sbjct: 61  QVCGKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 84  NYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYL 143
           ++ C+ C K+F+ SS L  H  IH+  +P+ C  C K F  +SDMK+H   H  +     
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 144 TVTG 147
            V G
Sbjct: 61  QVCG 64

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 5   CGKSFFSSTALKVHNRVHLGLKPYGCEV--CGRHFRQWGDLKYHKASLHSDVKAFQCEYC 62
           C K +F  + L++H+R H G KPY C+   C R F +   LK H+   H+ VK FQC+ C
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-HTGVKPFQCKTC 72
Query: 63  GKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIH 107
            + F+R   L  H R HTGE+ + C +  C K F  S  L  H  +H
Sbjct: 73  QRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 58  QCEYCGKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPHFC 115
           +C   GK F  KY LV H R+HTGE+ + C F  C K F  S  L+ H+R HTGEKP  C
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123
Query: 116 PV--CNKMFRVRSDMKRHLNTHNVD 138
               C++ F   SD K+H++ H  D
Sbjct: 124 EFEGCDRRFANSSDRKKHMHVHTSD 148

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 33  CGRHFRQWGDLKYHKASLHS-DVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEF-- 89
           C + FR    ++ H   LH+   +   C  CGK F     L  H+ +HTGE+ +QC F  
Sbjct: 13  CTKMFRDNSAMRKH---LHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG 69
Query: 90  CHKAFRASSYLQNHRRIHTGEKPHFCPV--CNKMFRVRSDMKRHLNTH 135
           C K F     L+ H RIHTG++P+ CP   CNK F   +++K H+ TH
Sbjct: 70  CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 46/82 (56%)
Query: 58  QCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPV 117
           +CE CGK F+RK  L  H R HTG + Y+C+ C  A   SS L  H RIH+ E+P  C +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 118 CNKMFRVRSDMKRHLNTHNVDA 139
           C    R  S +  HL +H  D+
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDS 91

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
           E C + F+R   L  H RIHTG++ +QC  C + F  S +L  H R HTGEKP  C +C 
Sbjct: 10  ESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 120 KMFRVRSDMKRHLNTH 135
           + F    + KRH   H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
           E C + F+R   L  H RIHTG++ +QC  C + F  S +L  H R HTGEKP  C +C 
Sbjct: 10  ESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 120 KMFRVRSDMKRHLNTH 135
           + F    + KRH   H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
           E C + F+R   L  H RIHTG++ +QC  C + F  S +L  H R HTGEKP  C +C 
Sbjct: 10  ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 120 KMFRVRSDMKRHLNTH 135
           + F    + KRH   H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%)
Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
           E C + F++  SL  H RIHTG++ +QC  C + F  S +L  H R HTGEKP  C +C 
Sbjct: 10  ESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 120 KMFRVRSDMKRHLNTH 135
           + F    + KRH   H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
           E C + F+R   L  H RIHTG++ +QC  C + F  S +L  H R HTGEKP  C +C 
Sbjct: 9   ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 68
Query: 120 KMFRVRSDMKRHLNTH 135
           + F    + KRH   H
Sbjct: 69  RKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
           E C + F+R   L  H RIHTG++ +QC  C + F  S +L  H R HTGEKP  C +C 
Sbjct: 10  ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 120 KMFRVRSDMKRHLNTH 135
           + F    + KRH   H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
           E C + F+   +L  H RIHTG++ +QC  C + F  S +L  H R HTGEKP  C +C 
Sbjct: 10  ESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 120 KMFRVRSDMKRHLNTH 135
           + F    + KRH   H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 33  CGRHFRQWGDLKYHKAS--LHSDVKAFQCEYCG-----KDFARKYSLVVHRRIHTGERNY 85
           C + F     L +H  S  +H + K F C + G     + F  +Y LVVH R HTGE+ +
Sbjct: 9   CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPH 68
Query: 86  QCEF--CHKAFRASSYLQNHRRIHTGEKPHFCP--VCNKMFRVRSDMKRHLNTHNVDARQ 141
           +C F  C K++     L+ H R HTGEKP+ C    C+K F   SD  +H N  + + + 
Sbjct: 69  KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP 128
Query: 142 YL 143
           Y+
Sbjct: 129 YV 130

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
           E C + F++K +L  H RIHTG++ +QC  C + F   + L  H R HTGEKP  C +C 
Sbjct: 10  ESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICG 69
Query: 120 KMFRVRSDMKRHLNTH 135
           + F       RH   H
Sbjct: 70  RKFATLHTRTRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
           E C + F++K +L  H RIHTG++ +QC  C + F   + L  H R HTGEKP  C +C 
Sbjct: 10  ESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICG 69
Query: 120 KMFRVRSDMKRHLNTH 135
           + F       RH   H
Sbjct: 70  RKFATLHTRDRHTKIH 85

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 55  KAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHT 108
           K + C  CGK F+R   LV H+R+HTGE+ Y+C  C KAF  +S L NH+RIHT
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 53  DVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           + + ++C+ CGK F+    L  HRR HTGE+ Y+C+ C KAF   S+L  H R+HTG  P
Sbjct: 15  ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 48  ASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIH 107
           +S  S  K + C+ CGK F  K     H  +H G R Y C  C K F+   +L  H +IH
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 108 TGEKPHFCPVCNKMFRVRSDMKRHLNT 134
           TG KP+ C +C K F  R    RH+ +
Sbjct: 61  TGIKPYECNICAKRFMWRDSFHRHVTS 87

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 55  KAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           K ++C+ C   F  K +L  H+ +HTGE+ Y+C  C   F   + L+ H RIH+GEKP
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 27/103 (26%)
Query: 5   CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGK 64
           CGK++  S+ LK H R H G KPY C+  G                           CG 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDG---------------------------CGW 45
Query: 65  DFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIH 107
            FAR   L  H R HTG R +QC+ C +AF  S +L  H + H
Sbjct: 46  KFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 59  CEY--CGKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPHF 114
           C+Y  CGK + +   L  H R HTGE+ Y C++  C   F  S  L  H R HTG +P  
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 115 CPVCNKMFRVRSD-----MKRHL 132
           C  C++ F  RSD     MKRH 
Sbjct: 68  CQKCDRAF-SRSDHLALHMKRHF 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 27/103 (26%)
Query: 5   CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGK 64
           CGK++  S+ LK H R H G KPY C+  G                           CG 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDG---------------------------CGW 46
Query: 65  DFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIH 107
            FAR   L  H R HTG R +QC+ C +AF  S +L  H + H
Sbjct: 47  KFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 52  SDVKAFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIH 107
           S      C+Y  CGK + +   L  H R HTGE+ Y C++  C   F  S  L  H R H
Sbjct: 2   SRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 61
Query: 108 TGEKPHFCPVCNKMFRVRSD-----MKRHL 132
           TG +P  C  C++ F  RSD     MKRH 
Sbjct: 62  TGHRPFQCQKCDRAF-SRSDHLALHMKRHF 90

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           ER + C FC K +R +S L  HRR H G +P  CP C K FR +S++ RHL  H
Sbjct: 2   ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH 55

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 59  CEY--CGKDFARKYSLVVHRRIHTGERNYQC--EFCHKAFRASSYLQNHRRIHTGEKPHF 114
           C+Y  C K + +   L  H R HTGE+ Y+C  E C   F  S  L  H R HTG KP  
Sbjct: 18  CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ 77
Query: 115 CPVCNKMFRVRSD-----MKRHLN 133
           C VCN+ F  RSD     MKRH N
Sbjct: 78  CGVCNRSF-SRSDHLALHMKRHQN 100

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDV-KAFQCE 60
          C+ CGK F     L  H   H G KPY C VCG  F++   + YH  S    V K + C+
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 61 YCGKDFARKYSLVVH-RRIHTG 81
           CGK F+R   L  H +++H+G
Sbjct: 70 SCGKGFSRPDHLNGHIKQVHSG 91

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 80  TGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHN 136
           +G     CE C K FR   +L  H+  H+GEKP+ CPVC   F+ +  M  H+ +H+
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHD 59

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 25/174 (14%)
Query: 5   CGKSFFSSTALKVHNRVHLGLKPYGC--EVCGRHFRQWGDLKYHKASLHSDVKAFQCEYC 62
           CG ++  +  L+ H   H G KP+ C  E C + F     L  H  + H+  K F C+  
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT-HTGEKNFTCDSD 78
Query: 63  GKD--FARKYSLVVH-RRIHTGER-NYQCEF--CHKAFRASSYLQNHRRIHTGEKPHFCP 116
           G D  F  K ++  H  R H  +   Y C F  C KAF+  + L+ H+  HT + P+ CP
Sbjct: 79  GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 138
Query: 117 --VCNKMFRVRSDMKRHLNTHNVDARQYLTVTGSQTGAPIKKEPKQECNGDYWS 168
              C+K F + S +KRH   H               G P KK+      G  W+
Sbjct: 139 HEGCDKRFSLPSRLKRHEKVH--------------AGYPCKKDDSCSFVGKTWT 178

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 62  CGKDFARKYSLVVHRRIHTGERNYQC--EFCHKAFRASSYLQNHRRIHTGEKPHFCPV-- 117
           CG  + + + L  H   HTGE+ + C  E C K F +  +L  H   HTGEK   C    
Sbjct: 11  CGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 70
Query: 118 CNKMFRVRSDMKRHLNT-HNV 137
           C+  F  +++MK+H N  HN+
Sbjct: 71  CDLRFTTKANMKKHFNRFHNI 91

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 54  VKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
           +K FQC  C ++F+R   L  H R HTGE+ + C+ C + F  S   + HR I      H
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-----H 55
Query: 114 FCPV 117
             P+
Sbjct: 56  ILPI 59

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 58  QCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIH 107
           +C YCGK F   Y L +H R HTGE+ Y+CEFC  A    + L+ H   H
Sbjct: 6   ECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 56  AFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHT 108
           A   E C + F+R   L  H RIHTG++ +QC  C + F  S +L  H R HT
Sbjct: 21  ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 19 NRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSD-VKAFQCEYCGKDFARKYSLVVHRR 77
           R H G KPY C +C   F Q G +K H    H++ V  F C +C    ARK  L VH R
Sbjct: 7  GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR 66

>pdb|2EP0|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 528- 560) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y+C+ CHK+FR  S L  H+RIHTGEKP
Sbjct: 10  EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP 40

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 57  FQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP 116
           + C  C + +    SL  H  IH+ E+ Y C +C K F  + Y   H   HTGE+ + C 
Sbjct: 23  YICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCL 82
Query: 117 VCNKMFRVRSDMKRHLNT 134
            C K F     M  H+ +
Sbjct: 83  ACGKSFINYQFMSSHIKS 100

>pdb|2EM6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 199- 231) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y+C+ C K F  SS+LQ H+R+HTGEKP
Sbjct: 10  EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP 40

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 84  NYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRH 131
           ++ CE C +AF    +L+ H R HT EKP+ C +CN+ F  R  + RH
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>pdb|2ENA|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 311- 343) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 80  TGERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           T E+ ++C+ C K+FR  S L +HR IHTGEKP
Sbjct: 8   TAEKPFRCDTCDKSFRQRSALNSHRMIHTGEKP 40

>pdb|2EMW|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 301- 331) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 48 ASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGER 83
          +S  S  K + C  CGKDF+ K  L+VH+RIHTGE+
Sbjct: 2  SSGSSGEKPYGCNECGKDFSSKSYLIVHQRIHTGEK 37

>pdb|2EMW|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 301- 331) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 80  TGERNYQCEFCHKAFRASSYLQNHRRIHTGEK 111
           +GE+ Y C  C K F + SYL  H+RIHTGEK
Sbjct: 6   SGEKPYGCNECGKDFSSKSYLIVHQRIHTGEK 37

>pdb|2EOR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 255- 287) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y CE C KAF   S LQ H+RIHTGEKP
Sbjct: 10  EKPYNCEECGKAFIHDSQLQEHQRIHTGEKP 40

>pdb|2ENE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (region 592- 624) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y+C  C K FR +SYL  H+RIHTGEKP
Sbjct: 10  EKPYKCNECGKVFRHNSYLSRHQRIHTGEKP 40

>pdb|2EOG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 693- 723) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 80  TGERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           +G + Y C  C KAFR+ SYL  H R HTGEKP
Sbjct: 6   SGVKPYGCSECGKAFRSKSYLIIHMRTHTGEKP 38

>pdb|2YTP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 687- 719) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 57 FQCEYCGKDFARKYSLVVHRRIHTGER 83
          ++C  CGK FARK +L++H+RIHTGE+
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEK 39

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y C++C KAF  S+ L  H+RIHTGEKP
Sbjct: 10  EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40

>pdb|2EQ1|A Chain A, Solution Structure Of The 9th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y+C  C KAFRA S L  H+ IHTGEKP
Sbjct: 10  EKPYKCNECGKAFRAHSNLTTHQVIHTGEKP 40

>pdb|2EPU|A Chain A, Solution Structure Of The Secound C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 32 Length = 45

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGERN 84
          K F+C +CGK F  K +LV H+RIHTGE++
Sbjct: 11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKS 40

>pdb|2EON|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 397- 429) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y+C+ C KAFR SS+L  H  +H+GE+P
Sbjct: 10  EKPYKCQVCGKAFRVSSHLVQHHSVHSGERP 40

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 20 RVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSD---VKAFQCEYCGKDFARKYSLVVH 75
          R H G KPY C  C + FRQ   L  H    H       AF C  CGK F R+ ++  H
Sbjct: 8  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 77  RIHTGERNYQCEFCHKAFRASSYLQNH-RRIHTGEKPHFCPV------CNKMFRVRSDMK 129
           R HTGE+ Y C  C K FR    L  H +R H    P+F P       C K F  R+ M 
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH---DPNFVPAAFVCSKCGKTFTRRNTMA 64
Query: 130 RHLN 133
           RH +
Sbjct: 65  RHAD 68

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y+C  C K F  +S+L NH RIHTGEKP
Sbjct: 10  EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y+C  C KAF  +S L  H+RIHTGEKP
Sbjct: 10  EKPYKCNECGKAFSQTSKLARHQRIHTGEKP 40

>pdb|2YTH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 479- 511) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ +QCE C K F  +S+L +H+R+HTGEKP
Sbjct: 10  EKPFQCEECGKRFTQNSHLHSHQRVHTGEKP 40

>pdb|2EMK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 668- 700) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y+C+ C KAF  +++L  H+R+HTGEKP
Sbjct: 10  EKPYECKECGKAFSQTTHLIQHQRVHTGEKP 40

>pdb|2YTA|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 3 In Zinc Finger Protein 32 Length = 41

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 48 ASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTG 81
          +S  S  K +QC+ CGK F+++ SL VH R+HTG
Sbjct: 2  SSGSSGEKPYQCKECGKSFSQRGSLAVHERLHTG 35

>pdb|2DLK|A Chain A, Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692 Length = 79

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 33 CGRHFRQWGDLKYHKASLHSDVKAFQCE--YCGKDFARKYSLVVHRRIHTGERNYQCEF 89
          CGR F     L +HK   H   K+F C    CGK F  K  L  H ++H+  R+Y CEF
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 73

>pdb|2EM2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 584- 616) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ ++C+ C KAFR + +L +H RIHTGEKP
Sbjct: 10  EKPFKCKECGKAFRQNIHLASHLRIHTGEKP 40

>pdb|2EQ2|A Chain A, Solution Structure Of The 16th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 83  RNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           + YQC  C KAF  +S L  H+R+HTGEKP
Sbjct: 11  KPYQCNECGKAFSQTSKLARHQRVHTGEKP 40

>pdb|2YSV|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 17 In Zinc Finger Protein 473 Length = 42

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 80  TGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
           +GE+ Y C+ C KAF  SS L  HRR+HTGE
Sbjct: 6   SGEKPYVCQECGKAFTQSSCLSIHRRVHTGE 36

>pdb|2EMF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 379- 411) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGER 83
          K F+C  CGK F RK +L +H++IHTGE+
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQKIHTGEK 39

>pdb|2EOE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 508- 540) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           E+ Y+C  C K F  +S+L NH+RIHTG KP
Sbjct: 10  EKPYKCNECGKVFTQNSHLANHQRIHTGVKP 40

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 5  CGKSFFSSTALKVHNRVHLGLKPYGC--EVCGRHFRQWGDLKYHK 47
          CGK++F S+ LK H R H G KP+ C  + C R F +  +L  H+
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR 69

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	171
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-45
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-44
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-41
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-37
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-37
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-33
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-36
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-32
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-36
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-23
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-35
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-24
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-34
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-31
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-33
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-30
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-33
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-21
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-33
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-27
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-19
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-33
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-30
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-14
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-29
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-26
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-29
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-28
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-28
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-27
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-26
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-25
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-25
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-21
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-24
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-22
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-24
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-22
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-12
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-23
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-15
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-23
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-23
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-22
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-22
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-20
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-21
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-21
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-17
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-19
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-19
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-15
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-17
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-16
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-16
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-16
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-16
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-16
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-16
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-16
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-16
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-16
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-16
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-16
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-16
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-16
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-16
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-16
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-16
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-16
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-16
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-16
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-16
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-16
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-15
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-15
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-15
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-15
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-15
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-15
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-15
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-15
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-15
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-15
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-15
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-15
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-15
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-15
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-15
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-15
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-15
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-15
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-15
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-15
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-15
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-15
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-15
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-15
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-15
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-15
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-15
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-15
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-15
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-14
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-14
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-14
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-14
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-14
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-14
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-14
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-14
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-14
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	7e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-14
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-14
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-14
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	8e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-14
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-09
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-14
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-14
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-14
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	8e-09
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-09
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-13
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	6e-13
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	7e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	9e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-13
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-12
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	8e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-12
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-10
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	6e-12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-11
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	8e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-08
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-08
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-05
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	2e-05
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	7e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	3e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	4e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	3e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	3e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	3e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	8e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  144 bits (367), Expect = 9e-45
 Identities = 58/134 (43%), Positives = 73/134 (54%), Gaps = 1/134 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C  CGKSF     L  H R H G KPY C  CG+ F Q  +L+ H+   H+  K + C  
Sbjct: 52  CPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQ-RTHTGEKPYACPE 110

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F++   L  H+R HTGE+ Y+C  C K+F     L  H+R HTGEKP+ CP C K 
Sbjct: 111 CGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKS 170

Query: 122 FRVRSDMKRHLNTH 135
           F  R  +  H  TH
Sbjct: 171 FSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  142 bits (361), Expect = 7e-44
 Identities = 58/134 (43%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C  CGKSF  S  L  H R H G KPY C  CG+ F    DL  H+   H+  K ++C  
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPE 82

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM 121
           CGK F+++ +L  H+R HTGE+ Y C  C K+F   ++L+ H+R HTGEKP+ CP C K 
Sbjct: 83  CGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKS 142

Query: 122 FRVRSDMKRHLNTH 135
           F    ++  H  TH
Sbjct: 143 FSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  135 bits (343), Expect = 4e-41
 Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 1/128 (0%)

Query: 8   SFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFA 67
           S F S++      +  G KPY C  CG+ F +   L  H+   H+  K ++C  CGK F+
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPECGKSFS 60

Query: 68  RKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSD 127
            K  L  H+R HTGE+ Y+C  C K+F   + L+ H+R HTGEKP+ CP C K F   + 
Sbjct: 61  DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAH 120

Query: 128 MKRHLNTH 135
           ++ H  TH
Sbjct: 121 LRAHQRTH 128

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  126 bits (319), Expect = 2e-37
 Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C  CGKSF     L+ H R H G KPY C  CG+ F Q   L+ H+   H+  K ++C  
Sbjct: 80  CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ-RTHTGEKPYKCPE 138

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           CGK F+R+ +L  H+R HTGE+ Y+C  C K+F     L  H+R HTG+K 
Sbjct: 139 CGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  123 bits (311), Expect = 8e-37
 Identities = 45/143 (31%), Positives = 59/143 (41%), Gaps = 12/143 (8%)

Query: 5   CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLH--------SDVKA 56
            G S            +         + C R F    +L  H    H             
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 57  FQCEYCGKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPHF 114
            +C   GK F  KY LV H R+HTGE+ + C F  C K F  S  L+ H+R HTGEKP  
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 115 CPV--CNKMFRVRSDMKRHLNTH 135
           C    C++ F   SD K+H++ H
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  113 bits (285), Expect = 7e-33
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 14/127 (11%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPY---------GCEVCGRHFRQWGDLKYHKASLHS 52
             +C ++F +   L  H  +     P           C   G+ F+    L  H   +H+
Sbjct: 28  KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHT 86

Query: 53  DVKAFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHT 108
             K F C +  CGK FAR  +L +H+R HTGE+ ++CEF  C + F  SS  + H  +HT
Sbjct: 87  GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

Query: 109 GEKPHFC 115
            +K    
Sbjct: 147 SDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 96.2 bits (240), Expect = 4e-26
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 13/115 (11%)

Query: 34  GRHFRQWGDLKYHKAS--LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEF-- 89
           G        +K   +   +     +   + C + F+  + LV H  +       Q     
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 90  -------CHKAFRASSYLQNHRRIHTGEKPHFCPV--CNKMFRVRSDMKRHLNTH 135
                    K+F+A   L NH R+HTGEKP  CP   C K+F    ++K H  TH
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 5/49 (10%), Positives = 16/49 (32%)

Query: 90  CHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD 138
              + +      + + I   +       C++ F    ++  H+   +V 
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVG 51

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  121 bits (306), Expect = 2e-36
 Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 3/113 (2%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYH--KASLHSDVKAFQC 59
           C TC K F S   LKVHNR H G KP+ C  CG+ + +  +L  H  +  ++   + F C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69

Query: 60  EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNH-RRIHTGEK 111
             C + F R+  L +H   HTGE  Y+C  C + F     LQ+H  ++H+G  
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  109 bits (275), Expect = 9e-32
 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 4/113 (3%)

Query: 22  HLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRR---I 78
             G     C  C + F     LK H    H+  K F+C  CGK + RK +L+ H     +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHN-RKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 79  HTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRH 131
           +  E+ + C  C + FR    L+ H   HTGE P+ C  C++ F  + D++ H
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  120 bits (304), Expect = 3e-36
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 12  STALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYS 71
           S+            K + C+ CGRHF +  +L  H+   H+D + + C+ C K F R+  
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQDH 60

Query: 72  LVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
           L  HR IH+ E+ ++C+ C K F  S  L  H+ +H        
Sbjct: 61  LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 87.5 bits (218), Expect = 3e-23
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 71  SLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKR 130
                R     ++ + C+FC + F  S  L  H R HT E+P+ C +C+K FR +  ++ 
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 131 HLNTH 135
           H   H
Sbjct: 64  HRYIH 68

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 50.5 bits (122), Expect = 4e-09
 Identities = 10/40 (25%), Positives = 14/40 (35%)

Query: 96  ASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
            SS     R     +K   C  C + F    ++  H  TH
Sbjct: 1   GSSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTH 40

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  120 bits (303), Expect = 2e-35
 Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 2   CDTCGKSFFSSTALKVH---NRVHLGLKPYGCEVCG-----RHFRQWGDLKYHKASLHSD 53
            D C + F S   L  H     +H   K + C   G     R F+    L  H    H+ 
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM-RRHTG 64

Query: 54  VKAFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNH-RRIHT 108
            K  +C +  C K ++R  +L  H R HTGE+ Y CE   C KAF  +S    H  R H+
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

Query: 109 GEKPHFCPV--CNKMFRVRSDMKRHLNTH 135
            EKP+ C +  C K +   S +++H+ T 
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 93.8 bits (234), Expect = 3e-25
 Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 8/115 (6%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGC--EVCGRHFRQWGDLKYHKASLHSDVKAFQC 59
           C    + F +   L VH R H G KP+ C  E C + + +  +LK H  S H+  K + C
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS-HTGEKPYMC 100

Query: 60  EY--CGKDFARKYSLVVH-RRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHTG 109
           E+  C K F+       H  R H+ E+ Y C+   C K +   S L+ H +   G
Sbjct: 101 EHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 90.3 bits (225), Expect = 7e-24
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 10/91 (10%)

Query: 55  KAFQCEYCGKDFARKYSLVVH---RRIHTGERNYQCEFC-----HKAFRASSYLQNHRRI 106
              + + C ++F  +  LV H     IH   + + C +       + F+A   L  H R 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 107 HTGEKPHFCPV--CNKMFRVRSDMKRHLNTH 135
           HTGEKPH C    C K +    ++K HL +H
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 8/62 (12%)

Query: 82  ERNYQCEFCHKAFRASSYLQNH---RRIHTGEKPHFCPVCN-----KMFRVRSDMKRHLN 133
           E + + + C + F +   L +H     IH   K   C         + F+ +  +  H+ 
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 134 TH 135
            H
Sbjct: 61  RH 62

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  115 bits (291), Expect = 4e-34
 Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 6/113 (5%)

Query: 5   CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY--C 62
           C K F  ++A++ H   H G + + C  CG+ F +   LK H+  +H+  K FQC +  C
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGC 70

Query: 63  GKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPH 113
           GK F+  ++L  H RIHTG+R Y C F  C+K F  S+ L++H   H   K +
Sbjct: 71  GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  109 bits (274), Expect = 2e-31
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 8/116 (6%)

Query: 26  KPYGC--EVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGER 83
           +   C  + C + FR    ++ H    H   +   C  CGK F     L  H+ +HTGE+
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHL-HTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEK 61

Query: 84  NYQCEF--CHKAFRASSYLQNHRRIHTGEKPHFCPV--CNKMFRVRSDMKRHLNTH 135
            +QC F  C K F     L+ H RIHTG++P+ CP   CNK F   +++K H+ TH
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  116 bits (293), Expect = 1e-33
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 3   DTCGKSFFSSTALKVHNRVHLGLKPYGCE--VCGRHFRQWGDLKYHKASLHSDVKA--FQ 58
           + C K F S   L  H+  H G K + C+   C   F    ++K H  +   ++K   + 
Sbjct: 48  EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHF-NRFHNIKICVYV 106

Query: 59  CEY--CGKDFARKYSLVVHRRIHTGERNYQC--EFCHKAFRASSYLQNHRRIHTGEKPHF 114
           C +  CGK F +   L VH+  HT +  Y+C  E C K F   S L+ H ++H G     
Sbjct: 107 CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 166

Query: 115 CPVCNKMFRVRSD-MKRHLNTHN 136
              C+ + +  +  +K     H 
Sbjct: 167 DDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  108 bits (273), Expect = 1e-30
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 18  HNRVHLGLKPYGCEV--CGRHFRQWGDLKYHKASLHSDVKAFQCEY--CGKDFARKYSLV 73
              + +  K Y C    CG  + +   L+ H    H+  K F C+   C K F   + L 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 74  VHRRIHTGERNYQCE--FCHKAFRASSYLQNHRRIHTGEK--PHFCPV--CNKMFRVRSD 127
            H   HTGE+N+ C+   C   F   + ++ H       K   + C    C K F+  + 
Sbjct: 62  RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121

Query: 128 MKRHLNTH 135
           +K H  +H
Sbjct: 122 LKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 15/51 (29%), Positives = 20/51 (39%)

Query: 3   DTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSD 53
           + C K F   + LK H +VH G      + C    + W     H A  H D
Sbjct: 140 EGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.0 bits (97), Expect = 5e-05
 Identities = 6/36 (16%), Positives = 12/36 (33%), Gaps = 2/36 (5%)

Query: 102 NHRRIHTGEKPHFC--PVCNKMFRVRSDMKRHLNTH 135
             + +    K + C    C   +     ++ HL  H
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKH 37

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  114 bits (287), Expect = 1e-33
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 26  KPYGCE--VCGRHFRQWGDLKYHKASLHSDVKAFQCEY--CGKDFARKYSLVVHRRIHTG 81
           +P+ C    C + + +   L+ H    H+  K +QC++  C + F+R   L  H+R HTG
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63

Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC--PVCNKMFRVRSDMKRHLNTH 135
            + +QC+ C + F  S +L+ H R HTGEKP  C  P C K F    ++ RH N H
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 82.2 bits (204), Expect = 5e-21
 Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 31/105 (29%)

Query: 5   CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGK 64
           C + F  S  LK H R H G+KP+ C+ C R F +   LK                    
Sbjct: 44  CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK-------------------- 83

Query: 65  DFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIH 107
                     H R HTGE+ + C +  C K F  S  L  H  +H
Sbjct: 84  ---------THTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 64.8 bits (159), Expect = 2e-14
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 80  TGERNYQCE--FCHKAFRASSYLQNHRRIHTGEKPHFCPV--CNKMFRVRSDMKRHLNTH 135
           + +R + C    C+K +   S+LQ H R HTGEKP+ C    C + F     +KRH   H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  113 bits (285), Expect = 3e-33
 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 20  RVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIH 79
               G K Y C+ CG+ F        H  S+H  ++ + C  CGK F  K+ LV H +IH
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 80  TGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRS 126
           TG + Y+C  C K F        HR + +  K +      +     S
Sbjct: 61  TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEAS 105

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 97.9 bits (245), Expect = 2e-27
 Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 51  HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
            S  K + C+ CGK F  K     H  +H G R Y C  C K F+   +L  H +IHTG 
Sbjct: 5   SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63

Query: 111 KPHFCPVCNKMFRVRSDMKRHLNT 134
           KP+ C +C K F  R    RH+ +
Sbjct: 64  KPYECNICAKRFMWRDSFHRHVTS 87

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 75.9 bits (188), Expect = 9e-19
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 77  RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
              +G++ Y C+ C K+F   S    H  +H G +P+ C VC K F+++  +  H+  H
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  111 bits (281), Expect = 6e-33
 Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 1/94 (1%)

Query: 22  HLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTG 81
                P+ CEVCG+ F +   LK H    H+ VK ++C+ C    A   SL  H RIH+ 
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
           ER ++C+ C  A R SS L  H R HTG+     
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  104 bits (262), Expect = 5e-30
 Identities = 34/85 (40%), Positives = 44/85 (51%)

Query: 51  HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
                  +CE CGK F+RK  L  H R HTG + Y+C+ C  A   SS L  H RIH+ E
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 111 KPHFCPVCNKMFRVRSDMKRHLNTH 135
           +P  C +C    R  S +  HL +H
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 64.4 bits (158), Expect = 2e-14
 Identities = 18/86 (20%), Positives = 27/86 (31%), Gaps = 29/86 (33%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
          C TC  +   S++L  H R+H   +P+ C++                             
Sbjct: 39 CKTCDYAAADSSSLNKHLRIHSDERPFKCQI----------------------------- 69

Query: 62 CGKDFARKYSLVVHRRIHTGERNYQC 87
          C         L VH R HTG+     
Sbjct: 70 CPYASRNSSQLTVHLRSHTGDSGPSS 95

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score =  102 bits (257), Expect = 2e-29
 Identities = 35/80 (43%), Positives = 45/80 (56%)

Query: 56  AFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
           +F C+ CGK F R  +L  H  IH+  R Y C++C K F   S ++ H  IHTGEKPH C
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 116 PVCNKMFRVRSDMKRHLNTH 135
            VC K F   S++  H   H
Sbjct: 61  QVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 93.3 bits (233), Expect = 7e-26
 Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 29/108 (26%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
           C  CGKSF  S+ L  H  +H   +PY                              C+Y
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPY-----------------------------PCQY 34

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTG 109
           CGK F +K  +  H  IHTGE+ ++C+ C KAF  SS L  H R HTG
Sbjct: 35  CGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  101 bits (253), Expect = 9e-29
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 26  KPYGCEV--CGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGER 83
           +PY C V  C R F Q G L  H   +H+  K FQC  C ++F+R   L  H R HTGE+
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 84  NYQCEFCHKAFRASSYLQNHRRIHTGEK 111
            + C+ C + F  S   + H +IH  +K
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 99.8 bits (250), Expect = 3e-28
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 55  KAFQC--EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
           + + C  E C + F++  SL  H RIHTG++ +QC  C + F  S +L  H R HTGEKP
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 113 HFCPVCNKMFRVRSDMKRHLNTH 135
             C +C + F    + KRH   H
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 58.6 bits (143), Expect = 2e-12
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 29/83 (34%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
          C  C ++F  S  L  H R H G KP+ C++CGR F +  + K                 
Sbjct: 37 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK----------------- 79

Query: 62 CGKDFARKYSLVVHRRIHTGERN 84
                       H +IH  +++
Sbjct: 80 ------------RHTKIHLRQKD 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 98.7 bits (247), Expect = 9e-28
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 22  HLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTG 81
             G     CE+CG+ FR    L  HK S HS  K + C  CG  F RK  +  H R H G
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLS-HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 82  ERN--YQCEFCHKAFRASSYLQNH-RRIHTGEK 111
                Y C+ C K F    +L  H +++H+G  
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 96.4 bits (241), Expect = 6e-27
 Identities = 31/87 (35%), Positives = 37/87 (42%), Gaps = 6/87 (6%)

Query: 51  HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
            S      CE CGK F   Y L  H+  H+GE+ Y C  C   F+    +  H R H G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 111 --KPHFCPVCNKMFRVRSDMKRHLNTH 135
             KP+ C  C K F        HLN H
Sbjct: 62  VGKPYICQSCGKGFSRPD----HLNGH 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 94.9 bits (237), Expect = 2e-26
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 54  VKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
           +K FQC  C ++F+R   L  H R HTGE+ + C+ C + F  S   + HR I     P 
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPI 59

Query: 114 FCPVCNKMFRVRSDMKRHLNTHNVDAR 140
                 ++         HL       +
Sbjct: 60  LEDKVEELLSKNY----HLENEVARLK 82

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 92.9 bits (232), Expect = 1e-25
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 25  LKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERN 84
           +KP+ C +C R+F +   L  H    H+  K F C+ CG+ FAR      HR I      
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILP 58

Query: 85  YQCEFCHKAFRASSYLQNHR---RIHTGEK 111
              +   +    + +L+N     +   GE+
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKLVGER 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 91.8 bits (229), Expect = 4e-25
 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 2/87 (2%)

Query: 51  HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC--EFCHKAFRASSYLQNHRRIHT 108
            +         CGK + +   L  H R HTGE+ Y C  + C   F  S  L  H R HT
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 109 GEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           G +P  C  C++ F     +  H+  H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 81.0 bits (201), Expect = 5e-21
 Identities = 35/106 (33%), Positives = 44/106 (41%), Gaps = 27/106 (25%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
              CGK++  S+ LK H R H G KPY C                             + 
Sbjct: 10  YAGCGKTYTKSSHLKAHLRTHTGEKPYHC---------------------------DWDG 42

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIH 107
           CG  FAR   L  H R HTG R +QC+ C +AF  S +L  H + H
Sbjct: 43  CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 87.9 bits (219), Expect = 7e-24
 Identities = 31/63 (49%), Positives = 39/63 (61%)

Query: 51  HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
           HS  K + C  CGK F+R   LV H+R+HTGE+ Y+C  C KAF  +S L NH+RIHT  
Sbjct: 9   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG 68

Query: 111 KPH 113
              
Sbjct: 69  PSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 84.1 bits (209), Expect = 3e-22
 Identities = 28/64 (43%), Positives = 34/64 (53%)

Query: 72  LVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRH 131
                 IH+GE+ Y C  C KAF  SS L  H+R+HTGEKP+ C  C K F   S +  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 132 LNTH 135
              H
Sbjct: 62  QRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 59.4 bits (145), Expect = 7e-13
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 29/84 (34%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
          C  CGK+F  S+ L  H RVH G KPY                             +C  
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPY-----------------------------KCLE 47

Query: 62 CGKDFARKYSLVVHRRIHTGERNY 85
          CGK F++   L+ H+RIHT   + 
Sbjct: 48 CGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYG 29
          C  CGK+F  ++ L  H R+H      G
Sbjct: 45 CLECGKAFSQNSGLINHQRIHTSGPSSG 72

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 87.9 bits (219), Expect = 9e-24
 Identities = 30/103 (29%), Positives = 40/103 (38%), Gaps = 29/103 (28%)

Query: 11  SSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKY 70
           SS +           + Y                             +C+ CGK F+   
Sbjct: 2   SSGSSGRSEWQQRERRRY-----------------------------KCDECGKSFSHSS 32

Query: 71  SLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
            L  HRR HTGE+ Y+C+ C KAF   S+L  H R+HTG  P 
Sbjct: 33  DLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 83.6 bits (208), Expect = 3e-22
 Identities = 27/69 (39%), Positives = 32/69 (46%)

Query: 67  ARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRS 126
               S           R Y+C+ C K+F  SS L  HRR HTGEKP+ C  C K F  RS
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60

Query: 127 DMKRHLNTH 135
            +  H   H
Sbjct: 61  HLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.2 bits (142), Expect = 3e-12
 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 29/84 (34%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
          CD CGKSF  S+ L  H R H G KPY C+                              
Sbjct: 21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDE----------------------------- 51

Query: 62 CGKDFARKYSLVVHRRIHTGERNY 85
          CGK F ++  L+ H R+HTG    
Sbjct: 52 CGKAFIQRSHLIGHHRVHTGSGPS 75

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 87.6 bits (218), Expect = 1e-23
 Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 51  HSDVKAFQCEY--CGKDFARKYSLVVHRRI-HTGERNYQCEF--CHKAFRASSYLQNHRR 105
            S      C++  CG+ F+ +  L  H++  H  ++++ C    C K+F    +L+ H +
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 106 IHTGEKPHFCPVCNKMF 122
           +H+  + + C       
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 64.9 bits (159), Expect = 7e-15
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 79  HTGERNYQCEF--CHKAFRASSYLQNHRRI-HTGEKPHFCP--VCNKMFRVRSDMKRHLN 133
            +G     C+F  C + F    YL +H++  H  +K   CP   C K F  +  +K H+ 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 134 TH 135
            H
Sbjct: 62  LH 63

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 47.2 bits (113), Expect = 4e-08
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 3  DTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHF 37
            CGKSF     LK H ++H   + Y CE  G   
Sbjct: 44 PACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 87.7 bits (218), Expect = 2e-23
 Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 4/94 (4%)

Query: 46  HKASLHSDVKAFQCE--YCGKDFARKYSLVVHRRIHTGERNYQC--EFCHKAFRASSYLQ 101
                    +   C+   C K + +   L  H R HTGE+ Y+C  E C   F  S  L 
Sbjct: 5   SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT 64

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
            H R HTG KP  C VCN+ F     +  H+  H
Sbjct: 65  RHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 81.9 bits (203), Expect = 3e-21
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 8   SFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQC--EYCGKD 65
           S  SS       R+H    P     C + + +   LK H    H+  K ++C  E C   
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWR 56

Query: 66  FARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHT 108
           FAR   L  H R HTG + +QC  C+++F  S +L  H + H 
Sbjct: 57  FARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.0 bits (115), Expect = 4e-08
 Identities = 17/43 (39%), Positives = 19/43 (44%)

Query: 5  CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHK 47
          C   F  S  L  H R H G KP+ C VC R F +   L  H 
Sbjct: 53 CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%)

Query: 93  AFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +  +S      RRIH  + P     C K++   S +K HL TH
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTH 40

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 86.0 bits (214), Expect = 4e-23
 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 29/102 (28%)

Query: 12  STALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYS 71
                 H+ +    KPY                             +C+ C   F  K +
Sbjct: 2   GHHHHHHSHMTHSDKPY-----------------------------KCDRCQASFRYKGN 32

Query: 72  LVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
           L  H+ +HTGE+ Y+C  C   F   + L+ H RIH+GEKP+
Sbjct: 33  LASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 84.4 bits (210), Expect = 2e-22
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query: 71  SLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKR 130
               H  +   ++ Y+C+ C  +FR    L +H+ +HTGEKP+ C +C   F   +++K 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 131 HLNTH 135
           H   H
Sbjct: 64  HTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.8 bits (146), Expect = 6e-13
 Identities = 26/84 (30%), Positives = 30/84 (35%), Gaps = 29/84 (34%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
          CD C  SF     L  H  VH G KPY C +                             
Sbjct: 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNI----------------------------- 50

Query: 62 CGKDFARKYSLVVHRRIHTGERNY 85
          CG  F R  +L  H RIH+GE+ Y
Sbjct: 51 CGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 51.3 bits (124), Expect = 1e-09
 Identities = 9/39 (23%), Positives = 17/39 (43%)

Query: 97  SSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
             +  +H  +   +KP+ C  C   FR + ++  H   H
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH 40

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 85.3 bits (212), Expect = 1e-22
 Identities = 19/112 (16%), Positives = 27/112 (24%), Gaps = 33/112 (29%)

Query: 15  LKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVV 74
                R H G KPY                              C +C K F +K  L +
Sbjct: 3   SGSSGRTHTGEKPY-----------------------------ACSHCDKTFRQKQLLDM 33

Query: 75  HRRIHTGERN----YQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMF 122
           H + +         + C  C K F   + +  H     G             
Sbjct: 34  HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 78.3 bits (194), Expect = 6e-20
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 71  SLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE----KPHFCPVCNKMFRVRS 126
           S     R HTGE+ Y C  C K FR    L  H + +           C  C K F  R+
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 127 DMKRHLNTH 135
            M RH +  
Sbjct: 62  TMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 9/36 (25%), Positives = 11/36 (30%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHF 37
          C  CGK+F     +  H     G      E  G   
Sbjct: 50 CSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 82.2 bits (204), Expect = 2e-21
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 71  SLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE--KPHFCPVCNKMFRVRSDM 128
           S     R H+GE+ Y+C  CH  F  S  ++ H      E      CP C+ +   +SD+
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 129 KRHLNTH 135
             HL   
Sbjct: 62  GVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 79.1 bits (196), Expect = 2e-20
 Identities = 22/102 (21%), Positives = 28/102 (27%), Gaps = 32/102 (31%)

Query: 15  LKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVV 74
                R H G KPY C +C   F Q G +K                             +
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMK-----------------------------M 33

Query: 75  HRRIHTGERN--YQCEFCHKAFRASSYLQNH-RRIHTGEKPH 113
           H      E    + C  C       S L  H R+ H+   P 
Sbjct: 34  HILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.8 bits (133), Expect = 5e-11
 Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 2/53 (3%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLG--LKPYGCEVCGRHFRQWGDLKYHKASLHS 52
          C  C   F  S  +K+H        +  + C  C     +  DL  H    HS
Sbjct: 18 CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS 70

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 81.9 bits (203), Expect = 3e-21
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 59  CEYCGKDFARKYSLVVHRRIHTGERNYQC--EFCHKAFRASSYLQNHRRIHTGEKPHFCP 116
            E CGK F +   L VH+  HT +  Y+C  E C K F   S L+ H ++H G       
Sbjct: 6   FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65

Query: 117 VCNKMFRVRSDMKRH 131
            C+ + +  +   +H
Sbjct: 66  SCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 73.8 bits (182), Expect = 3e-18
 Identities = 23/107 (21%), Positives = 32/107 (29%), Gaps = 28/107 (26%)

Query: 2   CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
            + CGK+F     LKVH   H    PY C   G                           
Sbjct: 6   FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG--------------------------- 38

Query: 62  CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNH-RRIH 107
           C K F+    L  H ++H G    + + C    +  +    H    H
Sbjct: 39  CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 79.9 bits (198), Expect = 8e-21
 Identities = 16/66 (24%), Positives = 27/66 (40%)

Query: 51  HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
            S     +C  C    + K +L +H RIH  +R ++C +C    +  S L  H +   G+
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63

Query: 111 KPHFCP 116
                 
Sbjct: 64  MSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 71.8 bits (177), Expect = 1e-17
 Identities = 12/59 (20%), Positives = 26/59 (44%)

Query: 77  RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
              +     +C  C  +  + + L+ H RIH  ++P  C  C+   +  S++ +H+   
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 29/87 (33%)

Query: 1  MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCE 60
           C  C  S  S  AL++H R+H   +P+                              C 
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFK-----------------------------CN 41

Query: 61 YCGKDFARKYSLVVHRRIHTGERNYQC 87
          YC  D  +  +L  H +   G+ +   
Sbjct: 42 YCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 76.8 bits (190), Expect = 1e-19
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 55  KAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNH-RRIHTGEK 111
           ++F CE C + FAR+  L  H R HT E+ Y C  C++AF     L  H ++IH+G  
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 64.0 bits (157), Expect = 1e-14
 Identities = 20/47 (42%), Positives = 28/47 (59%)

Query: 85  YQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRH 131
           + CE C +AF    +L+ H R HT EKP+ C +CN+ F  R  + RH
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 51.3 bits (124), Expect = 7e-10
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 30/82 (36%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
          C+ C ++F     LK H R H   KPY C +                             
Sbjct: 5  CEVCTRAFARQEHLKRHYRSHTNEKPYPCGL----------------------------- 35

Query: 62 CGKDFARKYSLVVH-RRIHTGE 82
          C + F R+  L+ H ++IH+G 
Sbjct: 36 CNRAFTRRDLLIRHAQKIHSGN 57

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 76.4 bits (189), Expect = 2e-19
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 77  RIHTGERNYQCEFCHKAFRASSYLQNHRRI--HTGEKPHFCPVCNKMFRVRSDMKRHLNT 134
               GE  Y+C+ C + +   S    H         K + CP C K F  + +M  H+  
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 135 HN 136
            +
Sbjct: 63  IH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 66.0 bits (162), Expect = 2e-15
 Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 51  HSDVKAFQCEYCGKDFARKYSLVVHRRI--HTGERNYQCEFCHKAFRASSYLQNHRRIHT 108
                 ++C+ C + +    +   H         + Y C FC K F     +  H +I  
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

Query: 109 G 109
            
Sbjct: 65  K 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 65.7 bits (161), Expect = 2e-15
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 19 NRVHLGLKPYGCEVCGRHFRQWGDLKYHK-ASLHSDVKAFQCEYCGKDFARKYSLVVHRR 77
               G   Y C+VC R +    +   H   S   +VK + C +C K+F RK ++  H +
Sbjct: 2  EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 78 IHTG 81
          I   
Sbjct: 62 IIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 2/48 (4%)

Query: 2  CDTCGKSFFSSTALKVHNRV--HLGLKPYGCEVCGRHFRQWGDLKYHK 47
          C  C + +   +    H        +K Y C  C + F +  ++  H 
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 75.5 bits (186), Expect = 5e-19
 Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 3/73 (4%)

Query: 51  HSDVKAFQCEYCGKDFARKYSLVVHRRIHT---GERNYQCEFCHKAFRASSYLQNHRRIH 107
            S     QCE CG    +K SL  H+R H        + CEFC K F     +  HR   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 108 TGEKPHFCPVCNK 120
                      + 
Sbjct: 62  HPALLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 72.4 bits (178), Expect = 1e-17
 Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 3/60 (5%)

Query: 79  HTGERNYQCEFCHKAFRASSYLQNHRRIHT---GEKPHFCPVCNKMFRVRSDMKRHLNTH 135
            +G    QCE C    R  + L  H+R H          C  C K F     +  H +  
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 66.3 bits (162), Expect = 2e-15
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 22 HLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDV---KAFQCEYCGKDFARKYSLVVHRRI 78
            G     CE+CG   RQ   L +H+   H++      F CE+CGK F +  S+  HR  
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

Query: 79 HTGERNYQCE 88
                   +
Sbjct: 61 SHPALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 65.9 bits (161), Expect = 4e-15
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 2  CDTCGKSFFSSTALKVHNRVH---LGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQ 58
          C+ CG +     +L  H R H   +    + CE CG+ F +   +  H++  H  +    
Sbjct: 10 CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69

Query: 59 CEYCGKDFA 67
           E  G    
Sbjct: 70 QESSGPSSG 78

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 6e-17
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 74  VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                  GE+ Y+C+ C K F  SS+LQ H+R+HTGEKP   
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 29/71 (40%)

Query: 17 VHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHR 76
                +G K Y                             +C+ CGK+F++   L  H+
Sbjct: 2  SSGSSGMGEKCY-----------------------------KCDVCGKEFSQSSHLQTHQ 32

Query: 77 RIHTGERNYQC 87
          R+HTGE+    
Sbjct: 33 RVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 16/29 (55%), Positives = 18/29 (62%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          CD CGK F  S+ L+ H RVH G KP G 
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                 GEK + C VC K F   S ++ H   H
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 1e-16
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C+ C KAFR SS+L  H  +H+GE+P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K ++C+ CGK F     LV H  +H+GER    
Sbjct: 7  GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C VC K FRV S + +H + H
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F  S+ L  H+ VH G +P G 
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 2e-16
 Identities = 21/41 (51%), Positives = 26/41 (63%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C+ CHK+FR  S L  H+RIHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K ++C+ C K F    SL VH+RIHTGE+    
Sbjct: 7  GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 3e-07
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C VC+K FR  S +  H   H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          CD C KSF   ++L VH R+H G KP G 
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 2e-16
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 74  VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 TGE+ ++C+ C K+F   S L  H  +HT EKP   
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K F+C+ CGK F  +  L  H  +HT E+     
Sbjct: 7  GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 6e-08
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP  C +C K F  RS + RH   H
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          CD CGKSF   + L  H+ VH   KP G  
Sbjct: 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 2e-16
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GE+ Y+C  C KAF   ++L  HRRIHTG +P   
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 17/38 (44%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           S  K ++C  CGK F R   L  HRRIHTG R     
Sbjct: 7  GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                +GEKP+ C  C K F   + +  H   H
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 3e-05
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGK+F   T L  H R+H G +P G  
Sbjct: 15 CSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 2e-16
 Identities = 21/41 (51%), Positives = 24/41 (58%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C KAFRA S L  H+ IHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F    +L  H+ IHTGE+     
Sbjct: 7  GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K FR  S++  H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK+F + + L  H  +H G KP G  
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 2e-16
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 74  VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 TG++ Y+C  C K F  +S+L  HR IHTGEKP   
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F +   L  HR IHTGE+     
Sbjct: 7  GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 4e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TG+KP+ C  C K+F   S + RH   H
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK F  ++ L  H  +H G KP G  
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 3e-16
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y C  C KAF  S++L  H R+HT E     
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 12/38 (31%), Positives = 15/38 (39%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K + C  CGK F     L  H R+HT E      
Sbjct: 7  GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP+ C VC K F + + + +HL  H
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK+F  S  L  H RVH      G  
Sbjct: 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 3e-16
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 74  VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 TGE+ Y+C+ C KAF   + L  H+R+H+GEKP   
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 15/72 (20%), Positives = 22/72 (30%), Gaps = 29/72 (40%)

Query: 17 VHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHR 76
                 G KPY                             +C+ C K F+   SL  H+
Sbjct: 2  SSGSSGTGEKPY-----------------------------ECDVCRKAFSHHASLTQHQ 32

Query: 77 RIHTGERNYQCE 88
          R+H+GE+     
Sbjct: 33 RVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C VC K F   + + +H   H
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          CD C K+F    +L  H RVH G KP G  
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 4e-16
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TG + Y C  C KAF   S L  H+ IHTGEKP   
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           + VK + C  CGK F+   SL  H+ IHTGE+     
Sbjct: 7  GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TG KP+ C  C K F V S +  H   H
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK+F   ++L  H  +H G KP G  
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 5e-16
 Identities = 21/41 (51%), Positives = 25/41 (60%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C K FR +SYL  H+RIHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F     L  H+RIHTGE+     
Sbjct: 7  GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP+ C  C K+FR  S + RH   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK F  ++ L  H R+H G KP G  
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 5e-16
 Identities = 22/41 (53%), Positives = 24/41 (58%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y CE C KAF   S LQ H+RIHTGEKP   
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K + CE CGK F     L  H+RIHTGE+     
Sbjct: 7  GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K F   S ++ H   H
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK+F   + L+ H R+H G KP G  
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.7 bits (164), Expect = 5e-16
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GE+ Y+C  C K F  +S+L NH RIHTGEKP   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           S  K ++C  CGK F +   L  H RIHTGE+    
Sbjct: 7  GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     +GEKP+ C  C K+F   S +  H   H
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ CGK F  ++ L  H R+H G KP G 
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 66.8 bits (164), Expect = 6e-16
 Identities = 20/41 (48%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TG+R Y+C  C KAF+  S L  HRR HTGEKP   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  + ++C  CGK F  K SL+ HRR HTGE+    
Sbjct: 7  GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TG++P+ C  C K F+ +S +  H  +H
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F + ++L  H R H G KP G 
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 6e-16
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GE+ Y C++C KAF  S+ L  H+RIHTGEKP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           S  K + C+YCGK F     LV H+RIHTGE+    
Sbjct: 7  GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                +GEKP+ C  C K F + +++ RH   H
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          CD CGK+F  S  L  H R+H G KP G 
Sbjct: 15 CDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 6e-16
 Identities = 20/41 (48%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y C  C K+F   S+L  HRRIHTGEKP   
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K + C  CGK F +K  L  HRRIHTGE+     
Sbjct: 7  GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K F  +S + RH   H
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGKSF   + L  H R+H G KP G  
Sbjct: 15 CNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 66.8 bits (164), Expect = 7e-16
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+CE C K F     L  H  +HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++CE CGK F  +  L  H  +HTGE+     
Sbjct: 7  GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP+ C  C K F  R D+  H   H
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 13/30 (43%), Positives = 15/30 (50%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK F     L  H+ VH G KP G  
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.7 bits (164), Expect = 7e-16
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C K FR +S+L  H+ IHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 5e-08
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F R   L  H+ IHTGE+     
Sbjct: 7  GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K+FR  S + RH   H
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGK F  ++ L  H  +H G KP G  
Sbjct: 15 CHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 66.8 bits (164), Expect = 7e-16
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y C+ C K+FR +S L  H+R+H+GEKP   
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K + C+ CGK F     L+ H+R+H+GE+     
Sbjct: 7  GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.6 bits (101), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K FR  S + +H   H
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGKSF  ++ L  H RVH G KP G  
Sbjct: 15 CKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.3 bits (163), Expect = 8e-16
 Identities = 19/41 (46%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C K F  +S+L  HR IHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F +   LV HR IHTGE+     
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP+ C  C K+F   S + RH   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK F  ++ L  H  +H G KP G  
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 8e-16
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 G++ ++C  C K F  SS L  H+RIHTGEKP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-09
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K F+C  C K F +  SL VH+RIHTGE+    
Sbjct: 7  GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ C K+F  S++L VH R+H G KP G 
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 9/33 (27%), Positives = 11/33 (33%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                 G+K   C  C K F   S +  H   H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 66.4 bits (163), Expect = 9e-16
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TG + Y C  C KAFR+ SYL  H R HTGE     
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           + +K + C  CGK F  K  L++H R HTGE     
Sbjct: 7  GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TG KP+ C  C K FR +S +  H  TH
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ CGK+F S + L +H R H G      
Sbjct: 15 CNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 9e-16
 Identities = 19/41 (46%), Positives = 21/41 (51%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ + C  C KAF     L  HRRIHTGEKP   
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 16/38 (42%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K F C  CGK F+    L  HRRIHTGE+     
Sbjct: 7  GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP  C  C K F     + +H   H
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 13/30 (43%), Positives = 15/30 (50%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGK+F     L  H R+H G KP G  
Sbjct: 15 CIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 1e-15
 Identities = 20/41 (48%), Positives = 24/41 (58%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C KAF  +S L  H+RIHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F++   L  H+RIHTGE+     
Sbjct: 7  GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP+ C  C K F   S + RH   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK+F  ++ L  H R+H G KP G  
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 1e-15
 Identities = 19/41 (46%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C KAFRA S L  H+  H+GEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K ++C  CGK F  + SL +H+  H+GE+    
Sbjct: 7  GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 9e-07
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K FR RS +  H  TH
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ CGK+F + ++L +H   H G KP G 
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 66.0 bits (162), Expect = 1e-15
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C K F  +S L  H++IHTGEKP   
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 48.7 bits (117), Expect = 5e-09
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F+R   L  H++IHTGE+     
Sbjct: 7  GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEK + C  C K+F   S + +H   H
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK F  ++ L  H ++H G KP G  
Sbjct: 15 CNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 1e-15
 Identities = 19/41 (46%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C K F  +S+L  HR IHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F +   L  HR IHTGE+     
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 4e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K+F   S + RH   H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK F  ++ L  H  +H G KP G  
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 1e-15
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGER ++C  C K+F  S++L  H+RIHTGEKP   
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  +  +C  CGK F +   L+ H+RIHTGE+     
Sbjct: 7  GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGE+PH C  C K F   + + +H   H
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGKSF  S  L  H R+H G KP G  
Sbjct: 15 CNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 66.0 bits (162), Expect = 1e-15
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 GER ++C  C K F  +S    HRRIHTGEKP   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
              +  +C  CGK F +  + + HRRIHTGE+    
Sbjct: 7  GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +      GE+ H C  C K F   S+  +H   H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK F  ++    H R+H G KP G 
Sbjct: 15 CSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 65.6 bits (161), Expect = 1e-15
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GE+ Y+C  C KAF   S L  H R H G      
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.0 bits (110), Expect = 6e-08
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           S  K ++C  CGK F  K  L+VH R H G      
Sbjct: 7  GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     +GEKP+ C  C K F  +S +  H  TH
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 5e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ CGK+F   + L VH R H G+     
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 1e-15
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y C+ C K+F  +  L  H R+H+GEKP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 7e-09
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K + C+ CGK F+R   L+ H R+H+GE+    
Sbjct: 7  GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEK + C  C K F     + +H   H
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGKSF  +  L  H R+H G KP G 
Sbjct: 15 CKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 2e-15
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C K F  +S+L  HRR+HTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F +   L  HRR+HTG +     
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K+F   S + RH   H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK F  ++ L  H RVH G KP G  
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 2e-15
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GE+ ++C+ C KAFR + +L +H RIHTGEKP   
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           S  K F+C+ CGK F +   L  H RIHTGE+     
Sbjct: 7  GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                +GEKP  C  C K FR    +  HL  H
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGK+F  +  L  H R+H G KP G  
Sbjct: 15 CKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 65.6 bits (161), Expect = 2e-15
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ ++C  C K+F  SS L  H+RIHTGEKP   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K F+C  CGK F+    L  H+RIHTGE+     
Sbjct: 7  GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP  C  C K F + S +  H   H
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGKSF  S+ L  H R+H G KP G  
Sbjct: 15 CAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 2e-15
 Identities = 21/41 (51%), Positives = 24/41 (58%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGER+Y+C  C KAF   S L  H+RIHTGEKP   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-09
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  + ++C  CGK FARK +L++H+RIHTGE+    
Sbjct: 7  GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGE+ + C  C K F  +S +  H   H
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F   + L +H R+H G KP G 
Sbjct: 15 CSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 2e-15
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GE+ +QCE C K F  +S+L +H+R+HTGEKP   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 7e-09
 Identities = 18/39 (46%), Positives = 22/39 (56%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S  S  K FQCE CGK F +   L  H+R+HTGE+    
Sbjct: 5  SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                +GEKP  C  C K F   S +  H   H
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ CGK F  ++ L  H RVH G KP G 
Sbjct: 15 CEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.7 bits (161), Expect = 2e-15
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C KAF  +S    H+R+HTG++P   
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F    S   H+R+HTG+R     
Sbjct: 7  GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP+ C  C K F   S   +H   H
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.3 bits (95), Expect = 9e-06
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGK+F  +++   H R+H G +P G  
Sbjct: 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 2e-15
 Identities = 19/41 (46%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TG + YQC  C KAF  +S L  H+R+HTGEKP   
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K +QC  CGK F++   L  H+R+HTGE+     
Sbjct: 7  GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TG KP+ C  C K F   S + RH   H
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK+F  ++ L  H RVH G KP G  
Sbjct: 15 CNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 2e-15
 Identities = 20/41 (48%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGER+Y+C  C KAF   S L  H+RIH GEKP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  + ++C  CGK F +K +L +H+RIH GE+    
Sbjct: 7  GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGE+ + C  C K F  +S +  H   H
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F   + L +H R+H G KP G 
Sbjct: 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 2e-15
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y C  C KAF   S L  H++IHT +KP   
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K + C  CGK F  + +L+ H++IHT ++     
Sbjct: 7  GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP+ C  C K F +RS++ +H   H
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGK+F   + L  H ++H   KP G  
Sbjct: 15 CAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 65.2 bits (160), Expect = 2e-15
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 74  VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 TGE+ Y+C  C KAF   S L  H+R HTGE     
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.6 bits (117), Expect = 5e-09
 Identities = 17/71 (23%), Positives = 21/71 (29%), Gaps = 29/71 (40%)

Query: 17 VHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHR 76
                 G KPY                             +C  C K F  K +L+VH+
Sbjct: 2  SSGSSGTGEKPY-----------------------------ECNECQKAFNTKSNLMVHQ 32

Query: 77 RIHTGERNYQC 87
          R HTGE     
Sbjct: 33 RTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K F  +S++  H  TH
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ C K+F + + L VH R H G      
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 2e-15
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C K F  +S+L NH+RIHTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F +   L  H+RIHTG +     
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K+F   S +  H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK F  ++ L  H R+H G+KP G  
Sbjct: 15 CNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 2e-15
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+CE C K + +   L  H+++HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-09
 Identities = 14/37 (37%), Positives = 24/37 (64%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K ++CE CGK +  K++L +H+++HTGER    
Sbjct: 7  GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K +  + ++  H   H
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ CGK + S   L +H +VH G +P G 
Sbjct: 15 CEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 2e-15
 Identities = 17/41 (41%), Positives = 25/41 (60%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GE+ ++CE C K F  +S L +H+R+HTGEKP   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           S  K F+CE CGK F +   L  H+R+HTGE+    
Sbjct: 7  GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     +GEKP  C  C K F   S +  H   H
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ CGK F  ++ L  H RVH G KP G 
Sbjct: 15 CEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 2e-15
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 74  VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 +GE+ Y C  C K F   S L  H+R HTGEKP   
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           S  K + C  CGK F++K  L  H+R HTGE+     
Sbjct: 7  GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                +GEKP+ C  C K F  +S +  H  TH
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK+F   + L  H R H G KP G  
Sbjct: 15 CNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 3e-15
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C+ C KAF   ++L  H++ HTGEKP   
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C+ C K F +K  L  H++ HTGE+     
Sbjct: 7  GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C VC+K F  ++ + +H  TH
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  C K+F     L  H + H G KP G  
Sbjct: 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 3e-15
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GE+ Y+C  C K ++    L  H+R+HTGEK    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           S  K ++C  CGK + R+  L  H+R+HTGE+    
Sbjct: 7  GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     +GEKP+ C  C K ++ R D+  H   H
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK +     L  H RVH G K  G 
Sbjct: 15 CVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 3e-15
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 74  VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 TGE+ Y+C  C KAF     L  H+RIH+G+KP   
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F+ + SL VH+RIH+G++     
Sbjct: 7  GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C VC K F  R  +  H   H
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGK+F    +L VH R+H G KP G  
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 3e-15
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 74  VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 TGE  Y+C  C KAF     L +H+R H GEKP   
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-09
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +    ++C  CGK F+RKY L+ H+R H GE+    
Sbjct: 7  GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGE P+ C  C K F  +  +  H  TH
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 13/29 (44%), Positives = 14/29 (48%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F     L  H R H G KP G 
Sbjct: 15 CHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 3e-15
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 GE+ Y C  C KAF + SYL  H R H+GEKP   
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 3e-09
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K + C  CGK F+ K  L++H R H+GE+     
Sbjct: 7  GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +      GEKP+ C  C K F  +S +  H+ TH
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGK+F S + L +H R H G KP G  
Sbjct: 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 3e-15
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C KAF   S L  H+ IHTG+KP   
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F+ + SL  H+ IHTG++     
Sbjct: 7  GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K F VRS +  H   H
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C+ CGK+F   ++L  H  +H G KP G  
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 64.8 bits (159), Expect = 3e-15
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C+ C KAF  +++L  H+R+HTGEKP   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K ++C+ CGK F++   L+ H+R+HTGE+    
Sbjct: 7  GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K F   + + +H   H
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F  +T L  H RVH G KP G 
Sbjct: 15 CKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 3e-15
 Identities = 19/41 (46%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C KAF   + L  H+RIHTGEKP   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K ++C  CGK FA+K +L  H+RIHTGE+    
Sbjct: 7  GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP+ C  C K F  ++++ +H   H
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F     L  H R+H G KP G 
Sbjct: 15 CGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 3e-15
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                + E+ Y+CE C K +     L  H+R+H GEK    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 14/37 (37%), Positives = 23/37 (62%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           S  K ++CE CGK + R+ +L +H+R+H GE+    
Sbjct: 7  GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     + EKP+ C  C K +  R ++  H   H
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ CGK +     L +H RVH+G K  G 
Sbjct: 15 CEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 4e-15
 Identities = 19/41 (46%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C KAF   S L  H++IHTGEKP   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K ++C  CGK F  + +L  H++IHTGE+     
Sbjct: 7  GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K F  RS++  H   H
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGK+F   + L  H ++H G KP G  
Sbjct: 15 CAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 4e-15
 Identities = 20/41 (48%), Positives = 22/41 (53%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGER Y C  C KAF   S L  H++IHTGEKP   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  + + C  CGK F  + +L+ H++IHTGE+    
Sbjct: 7  GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGE+P+ C VC K F  RS++ +H   H
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F   + L  H ++H G KP G 
Sbjct: 15 CTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 64.5 bits (158), Expect = 4e-15
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TG++ ++C  C K+FRA   L  H+RIHTGEK    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 49.5 bits (119), Expect = 3e-09
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K F+C +CGK F  K +LV H+RIHTGE++   
Sbjct: 7  GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TG+KP  C  C K FR + ++  H   H
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGKSF +   L  H R+H G K    
Sbjct: 15 CTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 4e-15
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 74  VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 TGE+ Y+C  C K+F   S L  H+RIHTGE P   
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K ++C  CGK F +K  L VH+RIHTGE     
Sbjct: 7  GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGKSF   + L VH R+H G  P G 
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C  C K F  +S +  H   H
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 4e-15
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C K+F   S L+ H++ HTGE+    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K ++C  CGK F  K  L +H++ HTGER+   
Sbjct: 7  GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 9e-07
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP+ C  C K F  +S ++ H   H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGKSF   + L++H + H G +  G 
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 4e-15
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ ++C  C K++    +L  H+R+HTGEKP   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K F+C  CGK + ++  L  H+R+HTGE+    
Sbjct: 7  GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP  C  C K +  R  + +H   H
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 14/29 (48%), Positives = 15/29 (51%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGKS+     L  H RVH G KP G 
Sbjct: 15 CGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 5e-15
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ ++C  C K+F  +S L  H+RIHTGE P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K  +C  CGK F+    L+VH+RIHTGE     
Sbjct: 7  GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 13/33 (39%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKPH C  C K F   S +  H   H
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGKSF  ++ L VH R+H G  P G 
Sbjct: 15 CRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.5 bits (158), Expect = 5e-15
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GE+ ++CE C K F  +S   +H+R H+GEKP   
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 8e-09
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           S  K F+CE CGK F        H+R H+GE+     
Sbjct: 7  GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     +GEKP  C  C K F   S    H  +H
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCG 34
          C+ CGK F++++    H R H G KP G    G
Sbjct: 15 CEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 5e-15
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 74  VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 TGE+ Y+C  C K+F   S L  H++IHTGEKP   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K ++C  CGK F +K  L VH++IHTGE+    
Sbjct: 7  GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP+ C +C K F  +S +  H   H
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGKSF   + L VH ++H G KP G 
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 64.5 bits (158), Expect = 5e-15
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNH-RRIHTGEKPHFCPVCNKMF 122
                +  + Y C+ C K F    +L  H +++HT E+PH C V     
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 58.4 bits (142), Expect = 1e-12
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVH-RRIHTGERNYQCEFCHKAF 94
          S  S  K + C+ CGK F+R   L  H +++HT ER ++C+      
Sbjct: 5  SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 2  CDTCGKSFFSSTALKVHN-RVHLGLKPYGCEVCGRHFRQ 39
          C +CGK F     L  H  +VH   +P+ C+V       
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 7/31 (22%), Positives = 12/31 (38%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHL 132
           +     +  KP+ C  C K F     +  H+
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHI 32

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 65.0 bits (159), Expect = 5e-15
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 75  HRRIHTGERNYQC--EFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHL 132
              +    R Y C  E C + F  S  L  H RIHTG+KP  C +C + F     +  H+
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

Query: 133 NTH 135
            TH
Sbjct: 70  RTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.6 bits (150), Expect = 1e-13
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 47  KASLHSDVKAFQC--EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHR 104
              +   ++ + C  E C + F+R   L  H RIHTG++ +QC  C + F  S +L  H 
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

Query: 105 RIHT 108
           R HT
Sbjct: 70  RTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 2e-07
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 5  CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHK 47
          C + F  S  L  H R+H G KP+ C +C R+F +   L  H 
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 6e-15
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TG ++++C  C KAF   S L  H++IHTGEKP   
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K F+C  CGK F RK +L +H++IHTGE+     
Sbjct: 7  GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TG K   C  C K F  +S +  H   H
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  CGK+F   + L +H ++H G KP G  
Sbjct: 15 CTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 64.1 bits (157), Expect = 8e-15
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ ++C  C K F   S L  H ++HTGEKP   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 48.3 bits (116), Expect = 8e-09
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +  K F+C  CGK F+R+ +L VH ++HTGE+    
Sbjct: 7  GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP  C  C K F  RS +  H   H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK F   +AL VH+++H G KP G 
Sbjct: 15 CVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 63.3 bits (155), Expect = 1e-14
 Identities = 16/41 (39%), Positives = 18/41 (43%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TG + Y C  C K F   S L  H+R HTG KP   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 49.1 bits (118), Expect = 3e-09
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           + VK + C  C K F+ K  L+VH+R HTG +    
Sbjct: 7  GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TG KP+ C  C K F ++S +  H  +H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  C K+F   + L VH R H G+KP G 
Sbjct: 15 CSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 63.3 bits (155), Expect = 1e-14
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
                 GE+ Y CE C   FR    L++H RIHTG  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.6 bits (109), Expect = 8e-08
 Identities = 18/68 (26%), Positives = 20/68 (29%), Gaps = 29/68 (42%)

Query: 18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRR 77
           +    G KPY CE+CG  FR    LK                              H R
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLK-----------------------------SHLR 32

Query: 78 IHTGERNY 85
          IHTG    
Sbjct: 33 IHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                 GEKP+ C +C   FR    +K HL  H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPY 28
          C+ CG  F     LK H R+H G  P 
Sbjct: 14 CEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-14
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE  + C  C K F   + L  H++IHTGE+P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-09
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +    F C  CGK F  K +L++H++IHTGER    
Sbjct: 7  GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGE P  C  C K+F  ++++  H   H
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK F   T L +H ++H G +P G 
Sbjct: 15 CSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-14
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GER Y C  C K F   S+L  H + H  EK    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 8e-09
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S  S  + + C  CGK+F R   L+ H + H  E++   
Sbjct: 5  SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                +GE+P+ C  C K F   S +  HL  H
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 6e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ CGK+F   + L  H + H   K  G 
Sbjct: 15 CNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-14
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ ++C  C KAF   S L  H+R HTGEKP   
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
           +  K F+C  C K F  K +L+VH+R HTGE+     
Sbjct: 7  GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP  C  C K F  +S++  H  TH
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  C K+F + + L VH R H G KP G  
Sbjct: 15 CSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-14
 Identities = 16/41 (39%), Positives = 18/41 (43%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 GE+ YQC  C K+F  S  L  H   HT EKP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S     K +QC  CGK F+  Y L  H   HT E+    
Sbjct: 5  SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 13/29 (44%), Positives = 13/29 (44%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGKSF  S  L  H   H   KP G 
Sbjct: 15 CSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                 GEKP+ C  C K F     + +H  TH
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-14
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ Y+C  C KAF   S L  H++ HTGE+    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          K ++C  CGK F RK  L +H++ HTGER+   
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F   + L +H + H G +  G 
Sbjct: 15 CSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP+ C  C K F  +S +  H  +H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 2e-14
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GER ++C  C K F   S+L  H R+H+ EK    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 5e-09
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S  S  + F+C  CGK F R+  L  H R+H+ E++   
Sbjct: 5  SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C+ CGK F   + L  H R+H   K  G 
Sbjct: 15 CNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                +GE+P  C  C K F  RS +  HL  H
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 2e-14
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +G++ Y+C+ C K F    +L  H+R+HTGE+    
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
          S  S  K ++C+ C K F +   L  H+R+HTGER+    
Sbjct: 5  SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                +G+KP+ C  C K F     + +H   H
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          C  C K+F     L  H RVH G +  G  
Sbjct: 15 CKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 63.0 bits (154), Expect = 2e-14
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +  +++QC  C + F   S+L  H+RIHTGEKP   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S  S  K+ QC  CG+ F  K  L  H+RIHTGE+    
Sbjct: 5  SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 8/34 (23%), Positives = 15/34 (44%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +     +  K H C  C + F ++S + +H   H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CG+ F   + L  H R+H G KP G 
Sbjct: 15 CHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 64.0 bits (155), Expect = 4e-14
 Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 6/110 (5%)

Query: 11  SSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYH----KASLHSDVKAFQCEYCGKDF 66
           S ++ K++  +  G   + C+ C   +    +L  H          + +           
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 67  ARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNH--RRIHTGEKPHF 114
            RK SL+        ++  +C +C  +F +   L  H  +  H  +    
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 58.2 bits (140), Expect = 7e-12
 Identities = 15/99 (15%), Positives = 25/99 (25%), Gaps = 6/99 (6%)

Query: 43  LKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRI-----HTGERNYQCEFCHKAFRAS 97
            K +  S+ +    F+C+ C   +     L VH                      +    
Sbjct: 7   GKLYG-SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 98  SYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHN 136
             L         +K   C  C   F    D+  H+    
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 97  SSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLN 133
            S  + +  I TG     C  C+  +    ++  H+N
Sbjct: 4   GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 61.8 bits (151), Expect = 5e-14
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
                 GE+ Y+CE C   F   ++L+ H  IHTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.9 bits (102), Expect = 9e-07
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                 GEKP+ C  C   F   + ++ H+  H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.7 bits (99), Expect = 2e-06
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNY 85
              K ++CE CG  F +   L  H  IHTG    
Sbjct: 6  SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPY 28
          C+TCG  F     L+ H  +H G  P 
Sbjct: 14 CETCGARFVQVAHLRAHVLIHTGSGPS 40

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 62.4 bits (152), Expect = 5e-14
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 71  SLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPHFC--PVCNKMFRVRS 126
                +   +  R++ C    C K +  SS+L+ H R HTGEKP  C    C + F    
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63

Query: 127 DMKRHLNTH 135
           ++ RH  TH
Sbjct: 64  ELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 55.9 bits (135), Expect = 2e-11
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 51  HSDVKAFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRI 106
            S +++  C +  CGK + +   L  H R HTGE+ + C +  C + F  S  L  HRR 
Sbjct: 12  SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71

Query: 107 H 107
           H
Sbjct: 72  H 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 42.4 bits (100), Expect = 3e-06
 Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 27/75 (36%)

Query: 5  CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGK 64
          CGK++F S+ LK H R H G KP+ C                             + C +
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSW---------------------------KGCER 57

Query: 65 DFARKYSLVVHRRIH 79
           FAR   L  HRR H
Sbjct: 58 RFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)

Query: 96  ASSYLQNHRRIHTGEKPHFCPV--CNKMFRVRSDMKRHLNTH 135
            SS     +   +  + H C    C K +   S +K H  TH
Sbjct: 1   GSSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH 42

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 61.8 bits (151), Expect = 5e-14
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
                 GE+ Y+C+ C KAF     L  H R+HTG  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.6 bits (109), Expect = 8e-08
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNY 85
              K ++C+ CGK F++K SL+VH R+HTG    
Sbjct: 6  SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                 GEKP+ C  C K F  +  +  H+  H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.9 bits (89), Expect = 5e-05
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPY 28
          CD CGK+F    +L VH RVH G  P 
Sbjct: 14 CDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 61.4 bits (150), Expect = 7e-14
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE  Y+C  C K F     L +H++ H+G+     
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.3 bits (116), Expect = 7e-09
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S  +    ++C  CGK F+RK  LV H++ H+G+     
Sbjct: 5  SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 7e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGE P+ C  C K+F  +  +  H  TH
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 10/29 (34%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK F     L  H + H G      
Sbjct: 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 61.4 bits (150), Expect = 8e-14
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNH-RRIHTGEKPHFCP 116
                TG++ Y+C  C KAF  ++ L  H R  HTGEKP    
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVH-RRIHTGERNYQC 87
           +  K ++C  CGK F +  SL+ H R  HTGE+    
Sbjct: 7  GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRH 131
           +     TG+KP+ C  C K F   + + RH
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 2  CDTCGKSFFSSTALKVHNR-VHLGLKPYGC 30
          C  CGK+F  +T+L  H R  H G KP G 
Sbjct: 15 CIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.1 bits (149), Expect = 9e-14
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ +QC+ C   F  S  L  H R H    P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S  +  K FQC+ CG +F+   SL  H R H        
Sbjct: 5  SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 7e-07
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP  C  C   F     + +HL +H
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CG +F  S +L  H R H    P G 
Sbjct: 15 CKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 61.0 bits (149), Expect = 9e-14
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 GE+ ++C  C   F  +S L+ H+ +H GEKP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S     K ++C  C   F++  SL +H+ +H GE+    
Sbjct: 5  SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  C   F  +++L++H  VH+G KP G 
Sbjct: 15 CRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 10/33 (30%), Positives = 13/33 (39%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                 GEK   C  C+  F   S ++ H N H
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 60.6 bits (148), Expect = 1e-13
 Identities = 14/40 (35%), Positives = 18/40 (45%)

Query: 76  RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
               +GE  Y+C  C KAF     L +H+R H GE     
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 50.6 bits (122), Expect = 1e-09
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S  S    ++C  CGK F RK  L+ H+R H GE     
Sbjct: 3  SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 38.6 bits (91), Expect = 3e-05
 Identities = 10/29 (34%), Positives = 11/29 (37%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F     L  H R H G      
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 104 RRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
               +GE P+ C  C K F  +  +  H  TH
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTH 33

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.3 bits (147), Expect = 2e-13
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+  +C  C KAF   S L  H+R H  +K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 8e-09
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S  +  K  +C  CGK F  K  L++H+R H  +++   
Sbjct: 5  SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  CGK+F   + L +H R H+  K  G 
Sbjct: 15 CTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                TGEKP  C  C K F  +S +  H  TH
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.3 bits (147), Expect = 2e-13
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                +GE+++ C+ C K F   S L+ H+R+H GEK    
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.7 bits (109), Expect = 7e-08
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE 88
          S  S  K+  C+ CGK+F    +L +H+R+H GE+     
Sbjct: 5  SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
          CD CGK+F   +AL++H RVH+G K  G  
Sbjct: 15 CDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                +GEK H C  C K F   S ++ H   H
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 59.9 bits (146), Expect = 3e-13
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
                 G   Y+C  C K+F     L  H+R+HT EKP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S  + V  ++C  C K F+ K  L+VH+R+HT E+    
Sbjct: 5  SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 13/29 (44%), Positives = 14/29 (48%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  C KSF     L VH R+H   KP G 
Sbjct: 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 8/33 (24%), Positives = 11/33 (33%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                 G  P+ C  C K F  +  +  H   H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 60.8 bits (147), Expect = 4e-13
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 9/75 (12%)

Query: 50  LHSDVKAFQCEYCGKDFARKYSLVVH-RRIHTGERNYQCEFCH--------KAFRASSYL 100
           +     +   + C + F+  + LV H    H G        C+        K+F+A   L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 101 QNHRRIHTGEKPHFC 115
            NH R+HTGEK    
Sbjct: 79  VNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 54.2 bits (130), Expect = 1e-10
 Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 22/87 (25%)

Query: 2  CDTCGKSFFSSTALKVH-NRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCE 60
            +C ++F +   L  H    H+G       VC      W +                C 
Sbjct: 28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-----YWEE----------------CP 66

Query: 61 YCGKDFARKYSLVVHRRIHTGERNYQC 87
            GK F  KY LV H R+HTGE++   
Sbjct: 67 REGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.7 bits (108), Expect = 2e-07
 Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 9/67 (13%)

Query: 78  IHTGERNYQCEFCHKAFRASSYLQNH-RRIHTGEKPHF--------CPVCNKMFRVRSDM 128
           I   + +   + C + F     L  H    H G             CP   K F+ +  +
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 129 KRHLNTH 135
             H+  H
Sbjct: 79  VNHIRVH 85

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 59.2 bits (144), Expect = 6e-13
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 75  HRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPHFC 115
                TGE+ + C +  C   F  S  L  HRR H+G KP   
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 43.1 bits (102), Expect = 7e-07
 Identities = 14/71 (19%), Positives = 18/71 (25%), Gaps = 27/71 (38%)

Query: 18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRR 77
                G KP+ C                               CG  F+R   L  HRR
Sbjct: 3  SGSSGTGEKPFACTW---------------------------PGCGWRFSRSDELSRHRR 35

Query: 78 IHTGERNYQCE 88
           H+G +     
Sbjct: 36 SHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 42.3 bits (100), Expect = 2e-06
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 102 NHRRIHTGEKPHFC--PVCNKMFRVRSDMKRHLNTH 135
           +     TGEKP  C  P C   F    ++ RH  +H
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 35.0 bits (81), Expect = 9e-04
 Identities = 12/27 (44%), Positives = 13/27 (48%)

Query: 5  CGKSFFSSTALKVHNRVHLGLKPYGCE 31
          CG  F  S  L  H R H G+KP G  
Sbjct: 20 CGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 58.7 bits (143), Expect = 8e-13
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 77  RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
              +GE+ + C  C KAF + SYL  H++ H  EKP   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 49 SLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          S  S  K F C  C K F+ K  L+VH++ H  E+    
Sbjct: 3  SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGC 30
          C  C K+F S + L VH + H   KP G 
Sbjct: 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 105 RIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
              +GEKP  C  C K F  +S +  H  TH
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 57.2 bits (139), Expect = 3e-12
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 77  RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
              +G+R Y+C+ C K+FR    L  H RIHTG  P 
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 45.6 bits (109), Expect = 8e-08
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 48 ASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNY 85
          +S  S  + ++C+ CGK F +K SL +H RIHTG    
Sbjct: 2  SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 37.2 bits (87), Expect = 9e-05
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPY 28
          C  CGKSF    +L +H R+H G  P 
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 57.7 bits (139), Expect = 3e-12
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 11 SSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKY 70
          SS +     ++HLG +   C  CG  F +         S  S  K   CE C KD  ++ 
Sbjct: 2  SSGSSGKRQKIHLGDRSQKCSKCGIIFIR--------RSTLSRRKTPMCEKCRKDSCQEA 53

Query: 71 SLVVHRRIHTGERNY 85
          +L       +G++  
Sbjct: 54 ALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 52.4 bits (125), Expect = 5e-10
 Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 8/73 (10%)

Query: 41  GDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYL 100
           G     +  +H   ++ +C  CG  F R+ +        +  +   CE C K     + L
Sbjct: 4   GSSGKRQ-KIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAAL 55

Query: 101 QNHRRIHTGEKPH 113
                  +G+K  
Sbjct: 56  NKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 47.7 bits (113), Expect = 3e-08
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 7/65 (10%)

Query: 71  SLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKR 130
           S    ++IH G+R+ +C  C   F   S         +  K   C  C K     + + +
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNK 57

Query: 131 HLNTH 135
                
Sbjct: 58  DEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 35.8 bits (82), Expect = 6e-04
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 96  ASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRH 131
           +S      ++IH G++   C  C  +F  RS + R 
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR 37

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.4 bits (137), Expect = 6e-12
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKP 112
                T  ++Y C  C KAF    +L  H++IHT +  
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG 40

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
           +D K++ C  CGK F R + L  H++IHT +     
Sbjct: 7  GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.3 bits (95), Expect = 7e-06
 Identities = 9/33 (27%), Positives = 11/33 (33%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                T  K + C  C K F     + RH   H
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 55.1 bits (132), Expect = 3e-11
 Identities = 17/55 (30%), Positives = 24/55 (43%)

Query: 57  FQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEK 111
           + CE CG    +   L  H R HT  R Y C +C+ +F+    L  H +     K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.4 bits (112), Expect = 3e-08
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 85  YQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           Y CE C    +  S L+ H R HT  +P+ C  CN  F+ + ++ +H+ + 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 44.7 bits (105), Expect = 3e-07
 Identities = 17/49 (34%), Positives = 24/49 (48%)

Query: 1  MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKAS 49
          +C+ CG      + LK H R H  ++PY C  C   F+  G+L  H  S
Sbjct: 3  ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.0 bits (98), Expect = 2e-06
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 28 YGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGER 83
          Y CE CG   ++   LK H  + H+DV+ + C YC   F  K +L  H +     +
Sbjct: 2  YICEECGIRXKKPSMLKKHIRT-HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 52.7 bits (127), Expect = 1e-10
 Identities = 11/39 (28%), Positives = 14/39 (35%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
                 GE  Y C  C K+F     L  H+R  +   P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 43.0 bits (102), Expect = 8e-07
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGER 83
                + C  CGK F ++ SL VH+R  +   
Sbjct: 6  SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 12/27 (44%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPY 28
          C  CGKSF    +L VH R      P 
Sbjct: 14 CGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.1 bits (84), Expect = 3e-04
 Identities = 9/34 (26%), Positives = 13/34 (38%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHN 136
                 GE P+ C  C K F  R  +  H  + +
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 50.0 bits (120), Expect = 2e-09
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 77  RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC 115
              +GE+ Y C  C + F  ++ L  H+++HT +     
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.9 bits (104), Expect = 3e-07
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 48 ASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC 87
          +S  S  K + C  C + F+    LV H+++HT +     
Sbjct: 2  SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 49.6 bits (118), Expect = 3e-09
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 77  RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN 119
                 +   CE C K FR   +L  H+  H+GEKP+     +
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.9 bits (106), Expect = 2e-07
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 48 ASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC 90
           S     K   CE CGK F   Y L  H+  H+GE+ Y     
Sbjct: 4  GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.2 bits (86), Expect = 1e-04
 Identities = 12/32 (37%), Positives = 13/32 (40%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVC 33
          C+ CGK F     L  H   H G KPY     
Sbjct: 15 CEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 49.1 bits (116), Expect = 2e-08
 Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 3/91 (3%)

Query: 41  GDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYL 100
           G      AS   + + +QC  C    +       H R+        C +C   F +    
Sbjct: 1   GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELK 58

Query: 101 QNHRRIHTGEKPHFCPVCNKMFRVRSDMKRH 131
           Q H       K   C  C + F+    + RH
Sbjct: 59  QEHES-KCEYKKLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.0 bits (95), Expect = 2e-05
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 4/81 (4%)

Query: 24  GLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGER 83
             + Y C +C        +   H+    +   A  C YC   F     L          +
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRN---AAVCPYCSLRFFSP-ELKQEHESKCEYK 68

Query: 84  NYQCEFCHKAFRASSYLQNHR 104
              C  C + F++S  +  H+
Sbjct: 69  KLTCLECMRTFKSSFSIWRHQ 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 38.7 bits (89), Expect = 1e-04
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 4/75 (5%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY 61
          C  C     S      H R+        C  C   F      + H++    + K   C  
Sbjct: 19 CRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHES--KCEYKKLTCLE 74

Query: 62 CGKDFARKYSLVVHR 76
          C + F   +S+  H+
Sbjct: 75 CMRTFKSSFSIWRHQ 89

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 47.5 bits (113), Expect = 2e-08
 Identities = 10/39 (25%), Positives = 15/39 (38%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
                 GE  ++C  C + F   +YL  H R H  +   
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.1 bits (91), Expect = 2e-05
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGER 83
           +    F+C  C + F ++  LV H R H  + 
Sbjct: 7  GAGENPFKCSKCDRVFTQRNYLVQHERTHARKS 39

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 48.8 bits (115), Expect = 4e-08
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 8/126 (6%)

Query: 13  TALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSL 72
           +  K +   H G+      V     +++  L   +  L   +              + S 
Sbjct: 8   SGSKKYLSNHKGI---FIHVTLEELKRYHQLTPEQKRLIRAIVKTLI--HNPQLLDESSY 62

Query: 73  VVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHL 132
           +           + C  C   F +S  L+ H R     K   CPVC K F        H+
Sbjct: 63  LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTDSALDHV 120

Query: 133 -NTHNV 137
              HN+
Sbjct: 121 CKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 40.3 bits (93), Expect = 5e-05
 Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 4/78 (5%)

Query: 5   CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGK 64
                   ++          +  + C +C   F     LK H   +        C  C K
Sbjct: 52  HNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQH---IRYTEHTKVCPVCKK 108

Query: 65  DFARKYSLVVH-RRIHTG 81
           +F    S + H  + H  
Sbjct: 109 EFTSTDSALDHVCKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 37.6 bits (86), Expect = 4e-04
 Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 1   MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHS 52
           +C  C   F SS +LK H R         C VC + F        H    H+
Sbjct: 76  VCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN 125

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 43.5 bits (103), Expect = 4e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIH 107
             R  TG + +QC  C ++F  S +L  HR+ H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 4/33 (12%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
             R  TG KP  CP C++ F  RSD   HL  H
Sbjct: 2   STRGSTGIKPFQCPDCDRSF-SRSD---HLALH 30

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 36

 Score = 39.4 bits (91), Expect = 2e-05
 Identities = 18/32 (56%), Positives = 20/32 (62%)

Query: 52 SDVKAFQCEYCGKDFARKYSLVVHRRIHTGER 83
          S  K F CEYC K F  K+SL  H RIHT E+
Sbjct: 5  SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 36

 Score = 34.8 bits (79), Expect = 7e-04
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 83  RNYQCEFCHKAFRASSYLQNHRRIHTGEK 111
           + + CE+C+K F+    LQ H RIHT EK
Sbjct: 8   KIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 40.1 bits (93), Expect = 3e-05
 Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 4/81 (4%)

Query: 11 SSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKA---FQCEYCGKDFA 67
          +      + +       Y C+ C           +H  S H +V     + C  C     
Sbjct: 2  AHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTK 61

Query: 68 RKYSLVVH-RRIHTGERNYQC 87
          R  +L  H  + H GE N++ 
Sbjct: 62 RYDALSEHNLKYHPGEENFKL 82

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 41.8 bits (97), Expect = 4e-05
 Identities = 9/54 (16%), Positives = 15/54 (27%)

Query: 54  VKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIH 107
           +     E      ++  + V      +    YQC  C     +   L  H   H
Sbjct: 150 MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 105 RIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYLTVTGSQT 150
              +    + C VC+ +     D+  H+ +H +     LT +  Q 
Sbjct: 173 PTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTSSEIQR 218

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 83  RNYQC--EFCHKAFRASSYLQNHRRIHTGEK 111
           R + C   +C K F  S  LQ H+R HTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 35.7 bits (83), Expect = 3e-04
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 55 KAFQC--EYCGKDFARKYSLVVHRRIHTGER 83
          + F C   YCGK F R   L  H+R HTGE+
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 80  TGERNYQCEF--CHKAFRASSYLQNHRRIHTGEK 111
             ++ + C    C K +  +S+L+ H R HTGE+
Sbjct: 4   GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 34.6 bits (80), Expect = 8e-04
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 83  RNYQCEFCHKAFRASSYLQNHRRIHTGEK 111
           R++ CE C +AF    +L+ H R HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	171
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.94
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.94
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.93
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.89
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.87
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.86
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.85
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.85
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.85
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.85
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.83
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.83
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.8
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.79
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.79
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.79
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.78
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.76
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.74
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.73
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.73
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.7
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.7
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.69
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.66
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.65
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.65
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.65
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.65
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.64
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.64
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.64
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.62
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.62
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.61
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.6
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.6
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.6
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.6
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.6
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.59
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.58
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.57
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.56
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.55
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.54
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.54
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.53
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.53
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.5
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.5
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.47
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.47
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.46
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.44
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.43
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.42
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.4
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.39
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.37
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.33
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.32
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.31
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.31
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.31
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.28
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.27
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.26
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.26
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.22
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.21
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.2
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.18
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.18
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.17
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.16
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.16
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.14
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.13
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.12
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.1
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.1
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.1
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.09
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.08
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.03
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.03
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.02
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.02
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.0
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.99
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.98
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.98
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.96
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.94
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.94
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.9
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.9
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.87
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.84
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.84
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.81
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.78
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.76
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.75
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.74
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.69
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.69
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.66
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.66
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.63
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.63
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.62
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.57
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.56
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.54
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.52
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.52
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.51
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.51
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.51
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.51
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.5
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.5
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.49
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.47
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.47
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.46
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.45
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.82
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.43
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.42
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.76
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.38
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.73
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.34
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.29
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.29
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.28
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.28
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.27
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.24
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.23
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.23
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.23
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.23
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.22
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.2
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.18
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.17
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.16
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.16
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.45
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.15
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.13
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.4
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.07
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.26
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.0
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.99
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.88
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.75
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.33
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.04
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.76
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.56
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.29
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.91
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.91
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.57
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.47
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.07
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.31
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	90.55
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.48
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	88.67
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	88.62
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.1
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	87.0
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	86.54
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	86.2
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	85.51
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	84.7
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	84.38
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	83.93
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	83.43
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	81.94

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=9.4e-34  Score=190.09  Aligned_cols=136  Identities=43%  Similarity=0.842  Sum_probs=66.1

Q ss_pred             CCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcC
Q psy12258          2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTG   81 (171)
Q Consensus         2 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~   81 (171)
                      |+.|+..|.....|..|++.|.++++|.|+.|++.|.....|..|++ .|.++++|.|..|++.|.+...|..|+..|++
T Consensus        24 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  102 (190)
T 2i13_A           24 CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTG  102 (190)
T ss_dssp             -------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHH-hcCCCCCccCcccCCccCCHHHHHHHHHhcCC
Confidence            45555555555555555555555555555555555555555555554 34444455555555555555555555555555


Q ss_pred             CCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258         82 ERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus        82 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +++|.|+.|++.|.....|..|++.|+++++|.|++|++.|.+.+.|..|+++|+++
T Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  159 (190)
T 2i13_A          103 EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE  159 (190)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCC
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            555555555555555555555555555555555555555555555555555555443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=1.1e-32  Score=184.81  Aligned_cols=138  Identities=42%  Similarity=0.824  Sum_probs=130.7

Q ss_pred             CCCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhc
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHT   80 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~   80 (171)
                      +|+.|+..|.+...|..|++.|.++++|.|+.|++.|.....|..|++ .|.++++|.|..|++.|.+...|..|++.|+
T Consensus        51 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  129 (190)
T 2i13_A           51 KCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAHQRTHT  129 (190)
T ss_dssp             ECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-HHHTCCCEECTTTCCEESSHHHHHHHHHHHH
T ss_pred             cCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhC
Confidence            489999999999999999999999999999999999999999999998 5888899999999999999999999999999


Q ss_pred             CCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccCc
Q psy12258         81 GERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDA  139 (171)
Q Consensus        81 ~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  139 (171)
                      ++++|.|+.|++.|.....|..|++.|+++++|.|++|++.|.....|..|+++|+++.
T Consensus       130 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          130 GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC----
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999999999998653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.96  E-value=1e-30  Score=169.87  Aligned_cols=136  Identities=34%  Similarity=0.582  Sum_probs=127.0

Q ss_pred             CCCccccccCChhhHHHHHH---HcCCCCCeeCCcc-----chhccCcccHHHhhhhcCCCCCcccccc--hhhhccChH
Q psy12258          1 MCDTCGKSFFSSTALKVHNR---VHLGLKPYGCEVC-----GRHFRQWGDLKYHKASLHSDVKAFQCEY--CGKDFARKY   70 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~~~~~~   70 (171)
                      +|+.|+..|.+...|..|++   +|.++++|.|++|     ++.|.+...|..|++ .|.++++|.|..  |++.|....
T Consensus         5 ~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~   83 (155)
T 2gli_A            5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLE   83 (155)
T ss_dssp             CBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTH-HHHCCCCCCCCSTTCCCCCSSHH
T ss_pred             CcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHH-hcCCCCCccCCCCCCCCcccCHH
Confidence            58999999999999999998   6888899998753     499999999999998 588899999985  999999999


Q ss_pred             HHHHHHhhhcCCCCccCcc--chhhcCCHHHHHHHH-HHhcCCCCccCcc--cccccCCchhHHHHHHHhcc
Q psy12258         71 SLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHR-RIHTGEKPHFCPV--CNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus        71 ~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  137 (171)
                      .|..|++.|+++++|.|+.  |++.|.....|..|+ ..|.++++|.|++  |++.|.+.+.|..|++.|++
T Consensus        84 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           84 NLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999999999999999998  999999999999998 7899999999988  99999999999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=4.2e-30  Score=172.31  Aligned_cols=134  Identities=34%  Similarity=0.610  Sum_probs=126.0

Q ss_pred             CccccccCChhhHHHHHHHcCCCCCeeC--CccchhccCcccHHHhhhhcCCCCCccccc--chhhhccChHHHHHHH-h
Q psy12258          3 DTCGKSFFSSTALKVHNRVHLGLKPYGC--EVCGRHFRQWGDLKYHKASLHSDVKAFQCE--YCGKDFARKYSLVVHR-R   77 (171)
Q Consensus         3 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~~~~~~~l~~h~-~   77 (171)
                      +.|+..|.+...|..|++.|.++++|.|  +.|++.|.....|..|++ .|.++++|.|.  .|++.|.+...|..|+ .
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   96 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNR   96 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHT-TTTTCCCEECCSSSCCCEESCHHHHHHHHHT
T ss_pred             CCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHH-HccCCCceeCCCCCCCCccCCHHHHHHHHHH
Confidence            7899999999999999999999999999  889999999999999998 68889999999  8999999999999999 5


Q ss_pred             hh-cCCCCccC--ccchhhcCCHHHHHHHHHHhcCCCCccCcc--cccccCCchhHHHHHHHhcc
Q psy12258         78 IH-TGERNYQC--EFCHKAFRASSYLQNHRRIHTGEKPHFCPV--CNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus        78 ~~-~~~~~~~C--~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  137 (171)
                      .| .+.++|.|  +.|++.|.....|..|+++|+++++|.|++  |++.|.+.+.|..|+++|++
T Consensus        97 ~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           97 FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             TSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             hcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            55 36789999  889999999999999999999999999988  99999999999999999876

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=9e-30  Score=170.68  Aligned_cols=135  Identities=30%  Similarity=0.599  Sum_probs=126.5

Q ss_pred             CC--CccccccCChhhHHHHHHHcCCCCCeeCC--ccchhccCcccHHHhhhhcC-CCCCcccc--cchhhhccChHHHH
Q psy12258          1 MC--DTCGKSFFSSTALKVHNRVHLGLKPYGCE--VCGRHFRQWGDLKYHKASLH-SDVKAFQC--EYCGKDFARKYSLV   73 (171)
Q Consensus         1 ~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h-~~~~~~~C--~~C~~~~~~~~~l~   73 (171)
                      +|  +.|+..|.+...|..|+++|.++++|.|+  .|++.|.+...|..|++..| .+..+|.|  ..|++.|.....|.
T Consensus        44 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~  123 (190)
T 1tf6_A           44 PCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLK  123 (190)
T ss_dssp             CCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHH
T ss_pred             cCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHH
Confidence            47  88999999999999999999999999999  89999999999999996577 57889999  88999999999999


Q ss_pred             HHHhhhcCCCCccCcc--chhhcCCHHHHHHHHHHhcCCCCccCcc---cccccCCchhHHHHHHHhccC
Q psy12258         74 VHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPHFCPV---CNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus        74 ~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      .|++.|+++++|.|+.  |++.|.....|..|+++|++   |.|..   |++.|.....|..|+++|+++
T Consensus       124 ~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          124 VHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            9999999999999988  99999999999999999988   89999   999999999999999998863

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=3.9e-27  Score=147.44  Aligned_cols=115  Identities=30%  Similarity=0.574  Sum_probs=104.6

Q ss_pred             CCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhh---hcCCCCccCccchhhcCCHHH
Q psy12258         23 LGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRI---HTGERNYQCEFCHKAFRASSY   99 (171)
Q Consensus        23 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~---~~~~~~~~C~~C~~~~~~~~~   99 (171)
                      .++++|.|++|++.|.....|..|++ .|.++++|.|..|++.|.....|..|+..   +.++++|.|+.|++.|.....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHH-HHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHH-hCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            45788999999999999999999998 57788899999999999999999999885   567889999999999999999


Q ss_pred             HHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        100 LQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       100 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      |..|++.|+++++|.|++|++.|.+...|..|++.+|..
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            999999999999999999999999999999999866544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.94  E-value=3.1e-27  Score=146.90  Aligned_cols=112  Identities=37%  Similarity=0.782  Sum_probs=106.3

Q ss_pred             CCCCCeeCCc--cchhccCcccHHHhhhhcCCCCCccccc--chhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHH
Q psy12258         23 LGLKPYGCEV--CGRHFRQWGDLKYHKASLHSDVKAFQCE--YCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASS   98 (171)
Q Consensus        23 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~   98 (171)
                      .++++|.|++  |++.|.+...|..|++ .|.++++|.|.  .|++.|.....|..|++.|+++++|.|+.|++.|....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHH-hhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            4678999997  9999999999999998 68888999999  79999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCccC--cccccccCCchhHHHHHHHh
Q psy12258         99 YLQNHRRIHTGEKPHFC--PVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus        99 ~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  135 (171)
                      .|..|++.|+++++|.|  +.|++.|.+.+.|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999  89999999999999999876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.93  E-value=4.1e-26  Score=142.86  Aligned_cols=113  Identities=36%  Similarity=0.733  Sum_probs=101.8

Q ss_pred             CCCeeCC--ccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCcc--chhhcCCHHHH
Q psy12258         25 LKPYGCE--VCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYL  100 (171)
Q Consensus        25 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l  100 (171)
                      +++|.|+  .|++.|.+...|..|++ .| +.++|.|..|++.|.....|..|+..|+++++|.|+.  |++.|.....|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLH-TH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHG-GG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHH-Hc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            5689999  89999999999999998 56 7889999999999999999999999999999999986  99999999999


Q ss_pred             HHHHHHhcCCCCccCc--ccccccCCchhHHHHHHHhccCc
Q psy12258        101 QNHRRIHTGEKPHFCP--VCNKMFRVRSDMKRHLNTHNVDA  139 (171)
Q Consensus       101 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  139 (171)
                      ..|++.|+++++|.|+  .|++.|.+.+.|..|+++|+++.
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            9999999999999996  59999999999999999998653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=4.8e-27  Score=148.44  Aligned_cols=108  Identities=28%  Similarity=0.424  Sum_probs=94.4

Q ss_pred             HHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCC
Q psy12258         17 VHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRA   96 (171)
Q Consensus        17 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~   96 (171)
                      .|..+|.|+++|.|++|++.|.....|..|++ .|.++++|.|..|++.|.....|..|+..|+++++|.|++|++.|..
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFN-IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHH-HHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHH-HcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            34557788899999999999999999999988 68889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCC------CccCcccccccCCc
Q psy12258         97 SSYLQNHRRIHTGEK------PHFCPVCNKMFRVR  125 (171)
Q Consensus        97 ~~~l~~H~~~h~~~~------~~~C~~C~~~f~~~  125 (171)
                      ...|..|++.|++++      +|+|.+|++.|...
T Consensus        91 ~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            999999999887654      58899999887643

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=8.4e-26  Score=146.66  Aligned_cols=118  Identities=37%  Similarity=0.640  Sum_probs=106.1

Q ss_pred             CCCCCeeCCccchhccCcccHHHhhhhcCCCCCc--------ccccchhhhccChHHHHHHHhhhcCCCCccCcc--chh
Q psy12258         23 LGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKA--------FQCEYCGKDFARKYSLVVHRRIHTGERNYQCEF--CHK   92 (171)
Q Consensus        23 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~--------~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~   92 (171)
                      ..+.+|.|+.|++.|.....|..|++..|.+..+        |.|..|++.|.....|..|++.|+++++|.|..  |++
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC
Confidence            3456789999999999999999999865776654        789999999999999999999999999999988  999


Q ss_pred             hcCCHHHHHHHHHHhcCCCCccCcc--cccccCCchhHHHHHHHhccCcc
Q psy12258         93 AFRASSYLQNHRRIHTGEKPHFCPV--CNKMFRVRSDMKRHLNTHNVDAR  140 (171)
Q Consensus        93 ~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~  140 (171)
                      .|.....|..|++.|+++++|.|.+  |++.|...+.|..|+++|+++..
T Consensus       101 ~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~  150 (155)
T 2rpc_A          101 IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS  150 (155)
T ss_dssp             EESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCC
T ss_pred             ccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999997  99999999999999999887643

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.7e-25  Score=139.03  Aligned_cols=110  Identities=38%  Similarity=0.708  Sum_probs=103.3

Q ss_pred             CCCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhc--CCCCCcccccchhhhccChHHHHHHHhh
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASL--HSDVKAFQCEYCGKDFARKYSLVVHRRI   78 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~--h~~~~~~~C~~C~~~~~~~~~l~~h~~~   78 (171)
                      +|++|+..|.+...|..|++.|.++++|.|++|++.|.....|..|+...  +.+..+|.|..|++.|.....|..|++.
T Consensus         9 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~   88 (124)
T 2dlq_A            9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVS   88 (124)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            59999999999999999999999999999999999999999999999853  5678899999999999999999999999


Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHH-hcCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRI-HTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~-h~~~  110 (171)
                      |+++++|.|+.|++.|.....|..|+.. |.++
T Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           89 HTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             cCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            9999999999999999999999999985 5543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=1.1e-25  Score=146.07  Aligned_cols=115  Identities=34%  Similarity=0.646  Sum_probs=107.8

Q ss_pred             CCCccccccCChhhHHHHHHH-cCCCCC--------eeCCccchhccCcccHHHhhhhcCCCCCcccccc--hhhhccCh
Q psy12258          1 MCDTCGKSFFSSTALKVHNRV-HLGLKP--------YGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY--CGKDFARK   69 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~~~~~   69 (171)
                      +|+.|++.|.+...|..|++. |.+..+        |.|++|++.|.....|..|++ .|.++++|.|..  |++.|...
T Consensus        27 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~  105 (155)
T 2rpc_A           27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARS  105 (155)
T ss_dssp             SCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTH-HHHCCCSEECSCTTTCCEESCH
T ss_pred             ccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHH-hcCCCCcccCCcCCCCCccCCH
Confidence            488999999999999999998 666554        789999999999999999998 688899999998  99999999


Q ss_pred             HHHHHHHhhhcCCCCccCcc--chhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         70 YSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        70 ~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      ..|..|++.|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus       106 ~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          106 ENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             HHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999999997  999999999999999999999999985

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=4.6e-25  Score=138.05  Aligned_cols=111  Identities=38%  Similarity=0.745  Sum_probs=100.9

Q ss_pred             CCC--ccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccc--hhhhccChHHHHHHH
Q psy12258          1 MCD--TCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEY--CGKDFARKYSLVVHR   76 (171)
Q Consensus         1 ~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~   76 (171)
                      +|+  .|+..|.+...|..|+++| ++++|.|++|++.|.....|..|++ .|.++++|.|..  |++.|.....|..|+
T Consensus         7 ~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   84 (124)
T 1ubd_C            7 ACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHV   84 (124)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGG-GTSCCCCEECCSTTCCCEESCHHHHHHHH
T ss_pred             cCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCeeCCCCCCcCccCCHHHHHHHH
Confidence            377  8999999999999999999 8899999999999999999999998 688999999986  999999999999999


Q ss_pred             hhhcCCCCccCc--cchhhcCCHHHHHHHHHHhcCCCCc
Q psy12258         77 RIHTGERNYQCE--FCHKAFRASSYLQNHRRIHTGEKPH  113 (171)
Q Consensus        77 ~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~  113 (171)
                      +.|+++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        85 ~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           85 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            999999999996  5999999999999999999998765

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=1.5e-24  Score=134.75  Aligned_cols=106  Identities=42%  Similarity=0.849  Sum_probs=101.0

Q ss_pred             CCCc--cccccCChhhHHHHHHHcCCCCCeeCC--ccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHH
Q psy12258          1 MCDT--CGKSFFSSTALKVHNRVHLGLKPYGCE--VCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHR   76 (171)
Q Consensus         1 ~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~   76 (171)
                      +|++  |+..|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++ .|.++++|.|..|++.|.....|..|+
T Consensus         8 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~   86 (119)
T 2jp9_A            8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTHT   86 (119)
T ss_dssp             CCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred             eCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHH-HcCCCCCccCCccCchhCCHHHHHHHH
Confidence            4776  999999999999999999999999999  79999999999999998 588899999999999999999999999


Q ss_pred             hhhcCCCCccC--ccchhhcCCHHHHHHHHHHh
Q psy12258         77 RIHTGERNYQC--EFCHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        77 ~~~~~~~~~~C--~~C~~~~~~~~~l~~H~~~h  107 (171)
                      +.|+++++|.|  +.|++.|.....|..|+++|
T Consensus        87 ~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           87 RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999  89999999999999999875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=9.6e-25  Score=137.88  Aligned_cols=95  Identities=27%  Similarity=0.496  Sum_probs=89.4

Q ss_pred             HhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCC
Q psy12258         45 YHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRV  124 (171)
Q Consensus        45 ~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  124 (171)
                      .|...+|.|+++|.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+.+|++++||.|++||+.|..
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            34445788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHhccCc
Q psy12258        125 RSDMKRHLNTHNVDA  139 (171)
Q Consensus       125 ~~~l~~H~~~h~~~~  139 (171)
                      .+.|..|++.||++.
T Consensus        91 ~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQD  105 (133)
T ss_dssp             HHHHHHHHHHHTCCC
T ss_pred             HHHHHHHhHHhcCCC
Confidence            999999999998654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=2.2e-23  Score=135.17  Aligned_cols=115  Identities=37%  Similarity=0.655  Sum_probs=104.2

Q ss_pred             CCCeeCCccchhccCcccHHHhhhh--cCCCCCcccccch-----hhhccChHHHHHHHhhhcCCCCccCcc--chhhcC
Q psy12258         25 LKPYGCEVCGRHFRQWGDLKYHKAS--LHSDVKAFQCEYC-----GKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFR   95 (171)
Q Consensus        25 ~~~~~C~~C~~~f~~~~~l~~H~~~--~h~~~~~~~C~~C-----~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~   95 (171)
                      |.++.|+.|++.|.+...|..|++.  .|.+.++|.|.+|     ++.|.....|..|++.|+++++|.|+.  |++.|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            3578999999999999999999985  5778889988753     499999999999999999999999985  999999


Q ss_pred             CHHHHHHHHHHhcCCCCccCcc--cccccCCchhHHHHH-HHhccCc
Q psy12258         96 ASSYLQNHRRIHTGEKPHFCPV--CNKMFRVRSDMKRHL-NTHNVDA  139 (171)
Q Consensus        96 ~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~  139 (171)
                      ....|..|++.|+++++|.|++  |++.|.+.+.|..|+ ++|.++.
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~  127 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK  127 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCC
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            9999999999999999999998  999999999999999 6676543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=2.8e-22  Score=119.88  Aligned_cols=91  Identities=38%  Similarity=0.673  Sum_probs=80.4

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHH
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKR  130 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  130 (171)
                      +.++++|.|..|++.|.....|..|++.|+++++|.|+.|++.|.....|..|+..|+++++|.|++|++.|.....|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            45677888999999999888899999888888999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccCccc
Q psy12258        131 HLNTHNVDARQ  141 (171)
Q Consensus       131 H~~~h~~~~~~  141 (171)
                      |+++|+++..+
T Consensus        83 H~~~h~~~~~p   93 (96)
T 2dmd_A           83 HLRSHTGDSGP   93 (96)
T ss_dssp             HHTTCCSCCCC
T ss_pred             HHHHhcCCCCC
Confidence            99998876543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.86  E-value=2.7e-22  Score=122.89  Aligned_cols=92  Identities=35%  Similarity=0.610  Sum_probs=86.0

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHH
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMK  129 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  129 (171)
                      .|.++++|.| .|++.|.....|..|++.|+++++|.|+.|++.|.....|..|++.|+++++|.|++|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            5788899999 899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCcccc
Q psy12258        130 RHLNTHNVDARQY  142 (171)
Q Consensus       130 ~H~~~h~~~~~~~  142 (171)
                      .|++.|+......
T Consensus        83 ~H~~~~~~~~~~~   95 (110)
T 2csh_A           83 RHVTSCTKSYEAA   95 (110)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHccccccch
Confidence            9999998765543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.85  E-value=7.4e-22  Score=114.58  Aligned_cols=82  Identities=43%  Similarity=0.852  Sum_probs=74.6

Q ss_pred             cccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHh
Q psy12258         56 AFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  135 (171)
                      ||.|..|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+..|+++++|.|++|++.|.+.+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            57888999999999999999999989999999999999999999999999999999999999999999999999999988


Q ss_pred             cc
Q psy12258        136 NV  137 (171)
Q Consensus       136 ~~  137 (171)
                      ++
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            63

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=7.8e-23  Score=126.26  Aligned_cols=100  Identities=17%  Similarity=0.239  Sum_probs=82.2

Q ss_pred             cccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhh--hcCCCCc-cCccchhhc--CCHHHHHHHHHHhcCCCCcc
Q psy12258         40 WGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRI--HTGERNY-QCEFCHKAF--RASSYLQNHRRIHTGEKPHF  114 (171)
Q Consensus        40 ~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~--~~~~~~~-~C~~C~~~~--~~~~~l~~H~~~h~~~~~~~  114 (171)
                      ...|..|++ .|.++++|.|..|++.|.....|..|++.  +.+.+++ .|+.|++.|  .....|..|+++|++++||.
T Consensus         4 ~~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            4 GSSGKLYGS-IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCC-CCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             chhhhhhee-eeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            456777776 67778888888888888888888888887  6556654 499999888  88889999999999999999


Q ss_pred             CcccccccCCchhHHHHHHHhccCcc
Q psy12258        115 CPVCNKMFRVRSDMKRHLNTHNVDAR  140 (171)
Q Consensus       115 C~~C~~~f~~~~~l~~H~~~h~~~~~  140 (171)
                      |++|++.|...+.|..|++.|+....
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCccc
Confidence            99999999999999999998875544

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.85  E-value=3e-21  Score=117.42  Aligned_cols=89  Identities=40%  Similarity=0.840  Sum_probs=76.6

Q ss_pred             CCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHH
Q psy12258         52 SDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRH  131 (171)
Q Consensus        52 ~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  131 (171)
                      ..+++|.|..|++.|.....|..|++.|+++++|.|+.|++.|.....|..|+..|+++++|.|.+|++.|.....|..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            45677888888888888888888888888888899999999999999999998888888889999999999999999999


Q ss_pred             HHHhccCcc
Q psy12258        132 LNTHNVDAR  140 (171)
Q Consensus       132 ~~~h~~~~~  140 (171)
                      +++|++...
T Consensus        93 ~~~H~~~~~  101 (106)
T 2ee8_A           93 KTLHMQTSS  101 (106)
T ss_dssp             HHHTTSCCC
T ss_pred             HHHhCCCCC
Confidence            988876543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.85  E-value=1.2e-21  Score=115.71  Aligned_cols=85  Identities=38%  Similarity=0.771  Sum_probs=74.4

Q ss_pred             CCccccc--chhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHH
Q psy12258         54 VKAFQCE--YCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRH  131 (171)
Q Consensus        54 ~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  131 (171)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+..|+++++|.|+.|++.|.+.+.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            5678887  58888888888888988888888999999999999999999999999999999999999999999999999


Q ss_pred             HHHhccC
Q psy12258        132 LNTHNVD  138 (171)
Q Consensus       132 ~~~h~~~  138 (171)
                      +++|+++
T Consensus        82 ~~~H~~~   88 (90)
T 1a1h_A           82 TKIHLRQ   88 (90)
T ss_dssp             HGGGGC-
T ss_pred             HHHhccc
Confidence            9988764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=5.9e-21  Score=116.09  Aligned_cols=92  Identities=33%  Similarity=0.641  Sum_probs=85.0

Q ss_pred             CCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHH
Q psy12258         23 LGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQN  102 (171)
Q Consensus        23 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~  102 (171)
                      ..+++|.|++|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHH-HHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            45678999999999999999999998 58888999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCccC
Q psy12258        103 HRRIHTGEKPHFC  115 (171)
Q Consensus       103 H~~~h~~~~~~~C  115 (171)
                      |+++|+++++|.+
T Consensus        92 H~~~H~~~~~~~~  104 (106)
T 2ee8_A           92 HKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHTTSCCCCCC
T ss_pred             HHHHhCCCCCCcC
Confidence            9999999988864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=9.5e-21  Score=112.90  Aligned_cols=85  Identities=34%  Similarity=0.709  Sum_probs=69.1

Q ss_pred             CCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCC--CCccCcccccccCCchhHH
Q psy12258         52 SDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE--KPHFCPVCNKMFRVRSDMK  129 (171)
Q Consensus        52 ~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~  129 (171)
                      .++++|.|..|++.|.....|..|++.|+++++|.|+.|++.|.....|..|++.|+++  ++|.|++|++.|.....|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            34667778888888887777888888777788888888888888888888888888876  8889999999999988999


Q ss_pred             HHHH-Hhc
Q psy12258        130 RHLN-THN  136 (171)
Q Consensus       130 ~H~~-~h~  136 (171)
                      .|++ +|.
T Consensus        83 ~H~~~~H~   90 (95)
T 2yt9_A           83 GHIKQVHS   90 (95)
T ss_dssp             HHHHHTSC
T ss_pred             HHHHHhcC
Confidence            9986 444

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=8.2e-21  Score=113.40  Aligned_cols=91  Identities=40%  Similarity=0.647  Sum_probs=83.9

Q ss_pred             cCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHH
Q psy12258         22 HLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQ  101 (171)
Q Consensus        22 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~  101 (171)
                      ..++++|.|++|++.|.....|..|++ .|.++++|.|..|++.|.....|..|+..|+++++|.|+.|++.|.....|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGG-GCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHH-hcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            356789999999999999999999998 6888899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCc
Q psy12258        102 NHRRIHTGEKPH  113 (171)
Q Consensus       102 ~H~~~h~~~~~~  113 (171)
                      .|++.|+++++.
T Consensus        82 ~H~~~h~~~~~p   93 (96)
T 2dmd_A           82 VHLRSHTGDSGP   93 (96)
T ss_dssp             HHHTTCCSCCCC
T ss_pred             HHHHHhcCCCCC
Confidence            999999887643

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=3.9e-22  Score=123.09  Aligned_cols=105  Identities=17%  Similarity=0.260  Sum_probs=91.8

Q ss_pred             hhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhc-CCCCCc-ccccchhhhc--cChHHHHHHHhhhcCCCCccC
Q psy12258         12 STALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASL-HSDVKA-FQCEYCGKDF--ARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        12 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~-h~~~~~-~~C~~C~~~~--~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      ...|..|+++|.++++|.|++|++.|.....|..|++.. |.+.++ +.|..|++.|  .....|..|++.|+++++|.|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            356788999999999999999999999999999999840 444554 4599999999  888999999999999999999


Q ss_pred             ccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         88 EFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        88 ~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      ++|++.|.....|..|++.|+.......+
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             CCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            99999999999999999998877655544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=1.5e-20  Score=114.51  Aligned_cols=85  Identities=19%  Similarity=0.372  Sum_probs=70.4

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHH
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMK  129 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  129 (171)
                      .|.++++|.|..|++.|.....|..|++.|  .++|.|+.|++.|.....|..|+. |.++++|.|.+|++.|.....|.
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~   86 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIW   86 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHH
Confidence            567778888888888888888888888877  368888889888888888888885 88888899999999999888999


Q ss_pred             HHHHHhcc
Q psy12258        130 RHLNTHNV  137 (171)
Q Consensus       130 ~H~~~h~~  137 (171)
                      .|++.+|.
T Consensus        87 ~H~~~~H~   94 (107)
T 1wjp_A           87 RHQVEVHN   94 (107)
T ss_dssp             HHHHHTSC
T ss_pred             HHHHHHcC
Confidence            99874443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=3.9e-21  Score=117.14  Aligned_cols=95  Identities=17%  Similarity=0.286  Sum_probs=87.7

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCH
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRAS   97 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~   97 (171)
                      +++.|.++++|.|++|++.|.....|..|++. |  .++|.|..|++.|.....|..|+. |+++++|.|.+|++.|...
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERL-C--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHH-H--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHH-C--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            45678899999999999999999999999985 6  468999999999999999999996 9999999999999999999


Q ss_pred             HHHHHHHH-HhcCCCCccCc
Q psy12258         98 SYLQNHRR-IHTGEKPHFCP  116 (171)
Q Consensus        98 ~~l~~H~~-~h~~~~~~~C~  116 (171)
                      ..|..|++ .|.++++|.+.
T Consensus        83 ~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCCC
Confidence            99999997 89999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.81  E-value=1.4e-20  Score=110.99  Aligned_cols=87  Identities=38%  Similarity=0.787  Sum_probs=76.7

Q ss_pred             CCCCeeCC--ccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHH
Q psy12258         24 GLKPYGCE--VCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQ  101 (171)
Q Consensus        24 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~  101 (171)
                      ++++|.|+  .|++.|.....|..|++ .|.+.++|.|..|++.|.....|..|+..|+++++|.|+.|++.|.....|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence            35789998  59999999999999988 5778889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCC
Q psy12258        102 NHRRIHTGEK  111 (171)
Q Consensus       102 ~H~~~h~~~~  111 (171)
                      .|+++|++++
T Consensus        80 ~H~~~H~~~k   89 (90)
T 1a1h_A           80 RHTKIHLRQK   89 (90)
T ss_dssp             HHHGGGGC--
T ss_pred             HHHHHhcccC
Confidence            9999998765

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=2.4e-20  Score=108.12  Aligned_cols=82  Identities=43%  Similarity=0.897  Sum_probs=64.8

Q ss_pred             CeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHH
Q psy12258         27 PYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRI  106 (171)
Q Consensus        27 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~  106 (171)
                      ||.|++|++.|.....|..|++ .|.++++|.|..|++.|.....|..|+..|+++++|.|+.|++.|.....|..|++.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-HHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHH-HcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            4678888888888888888877 466777788888888888888888888888888888888888888888888888887


Q ss_pred             hcC
Q psy12258        107 HTG  109 (171)
Q Consensus       107 h~~  109 (171)
                      |++
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            753

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.80  E-value=1.7e-19  Score=108.41  Aligned_cols=84  Identities=37%  Similarity=0.729  Sum_probs=77.2

Q ss_pred             CCCcccccc--hhhhccChHHHHHHHhhhcCCCCccCc--cchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhH
Q psy12258         53 DVKAFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCE--FCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDM  128 (171)
Q Consensus        53 ~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  128 (171)
                      ..++|.|..  |++.|.....|..|++.|+++++|.|+  .|++.|.....|..|++.|+++++|.|++|++.|.....|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            456788986  999999999999999999999999996  5999999999999999999999999999999999999999


Q ss_pred             HHHHHHhc
Q psy12258        129 KRHLNTHN  136 (171)
Q Consensus       129 ~~H~~~h~  136 (171)
                      ..|+++|.
T Consensus        92 ~~H~~~H~   99 (100)
T 2ebt_A           92 ALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99999886

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.79  E-value=3.9e-20  Score=100.35  Aligned_cols=57  Identities=46%  Similarity=0.919  Sum_probs=52.7

Q ss_pred             CCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258         82 ERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus        82 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      ++||.|.+|++.|.....|..|+++|++++||.|++||+.|...+.|..|+++|.+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            689999999999999999999999999999999999999999999999999998764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=2e-19  Score=107.13  Aligned_cols=87  Identities=37%  Similarity=0.728  Sum_probs=79.6

Q ss_pred             CCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCC--CCccCccchhhcCCHHHH
Q psy12258         23 LGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGE--RNYQCEFCHKAFRASSYL  100 (171)
Q Consensus        23 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~--~~~~C~~C~~~~~~~~~l  100 (171)
                      .++++|.|++|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|+++  ++|.|+.|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHH-HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            46788999999999999999999998 688899999999999999999999999999987  899999999999999999


Q ss_pred             HHHHH-HhcCC
Q psy12258        101 QNHRR-IHTGE  110 (171)
Q Consensus       101 ~~H~~-~h~~~  110 (171)
                      ..|++ .|.++
T Consensus        82 ~~H~~~~H~~~   92 (95)
T 2yt9_A           82 NGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHTSCCC
T ss_pred             HHHHHHhcCCC
Confidence            99986 56554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.79  E-value=8.9e-20  Score=107.34  Aligned_cols=82  Identities=35%  Similarity=0.777  Sum_probs=68.7

Q ss_pred             CCcccccc--hhhhccChHHHHHHHhhhcCCCCccCc--cchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHH
Q psy12258         54 VKAFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCE--FCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMK  129 (171)
Q Consensus        54 ~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  129 (171)
                      ..+|.|..  |++.|.....|..|+..|.++++|.|+  .|++.|.....|..|+..|+++++|.|+.|++.|...+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            45677877  888888888888888888888888886  58888888888888888888888888888888888888888


Q ss_pred             HHHHHh
Q psy12258        130 RHLNTH  135 (171)
Q Consensus       130 ~H~~~h  135 (171)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            888876

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=1.5e-19  Score=110.54  Aligned_cols=87  Identities=33%  Similarity=0.639  Sum_probs=81.5

Q ss_pred             HcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHH
Q psy12258         21 VHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYL  100 (171)
Q Consensus        21 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l  100 (171)
                      .|.++++|.| .|++.|.....|..|++ .|.+.++|.|..|++.|.....|..|++.|+++++|.|+.|++.|.....|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHH-HcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            4778999999 99999999999999998 588889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcC
Q psy12258        101 QNHRRIHTG  109 (171)
Q Consensus       101 ~~H~~~h~~  109 (171)
                      ..|++.|+.
T Consensus        82 ~~H~~~~~~   90 (110)
T 2csh_A           82 HRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHccc
Confidence            999988754

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.76  E-value=5.4e-20  Score=108.17  Aligned_cols=83  Identities=27%  Similarity=0.549  Sum_probs=70.9

Q ss_pred             CCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHH
Q psy12258         54 VKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      +++|.|..|++.|.....|..|++.|+++++|.|+.|++.|.....|..|+..|++ .+|.|+.|++.|.....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            35788888888888888888888888888889999999999999999999888874 77889999999999999999987


Q ss_pred             Hhcc
Q psy12258        134 THNV  137 (171)
Q Consensus       134 ~h~~  137 (171)
                      .+|.
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7664

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.74  E-value=1.5e-18  Score=101.13  Aligned_cols=78  Identities=31%  Similarity=0.633  Sum_probs=70.7

Q ss_pred             cccc--cchhhhccChHHHHHHHhhhcCCCCccCcc--chhhcCCHHHHHHHHHHhcCCCCccCcc---cccccCCchhH
Q psy12258         56 AFQC--EYCGKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPHFCPV---CNKMFRVRSDM  128 (171)
Q Consensus        56 ~~~C--~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  128 (171)
                      ||.|  ..|++.|.....|..|++.|.++++|.|+.  |++.|.....|..|++.|++   |.|..   |++.|...+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5788  889999999999999999999999999988  99999999999999999888   99999   99999999999


Q ss_pred             HHHHHHhc
Q psy12258        129 KRHLNTHN  136 (171)
Q Consensus       129 ~~H~~~h~  136 (171)
                      ..|+++||
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99998875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.73  E-value=5.1e-19  Score=111.18  Aligned_cols=115  Identities=22%  Similarity=0.279  Sum_probs=88.8

Q ss_pred             HHcCCCCCeeCCccchhccCcccHHHhhhh--cCCCCCcccccchhhhcc------ChHHHHHHHhhhcCCCCccCccch
Q psy12258         20 RVHLGLKPYGCEVCGRHFRQWGDLKYHKAS--LHSDVKAFQCEYCGKDFA------RKYSLVVHRRIHTGERNYQCEFCH   91 (171)
Q Consensus        20 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--~h~~~~~~~C~~C~~~~~------~~~~l~~h~~~~~~~~~~~C~~C~   91 (171)
                      ..+.+.++|.|...+....  ..+..+.+.  .....+.+.|.+|.+.|.      ....|..|+ .|+++++|.|..|+
T Consensus         5 ~~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~   81 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCL   81 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTC
T ss_pred             hhcccccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCC
Confidence            3567788898877554432  233333221  122345678888887776      456666666 68889999999999


Q ss_pred             hhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccCc
Q psy12258         92 KAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDA  139 (171)
Q Consensus        92 ~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  139 (171)
                      +.|.....|..|+++|  ++||.|+.|++.|...+.|..|++.|+++.
T Consensus        82 k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             CEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             cccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            9999999999999998  899999999999999999999999998763

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.73  E-value=3.5e-18  Score=100.44  Aligned_cols=82  Identities=37%  Similarity=0.703  Sum_probs=75.4

Q ss_pred             CCCeeCCc--cchhccCcccHHHhhhhcCCCCCccccc--chhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHH
Q psy12258         25 LKPYGCEV--CGRHFRQWGDLKYHKASLHSDVKAFQCE--YCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYL  100 (171)
Q Consensus        25 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l  100 (171)
                      .++|.|+.  |++.|.....|..|++ .|.++++|.|.  .|++.|.....|..|+..|+++++|.|+.|++.|.....|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHT-TSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHH-hcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            56799999  9999999999999998 68888999997  5999999999999999999999999999999999999999


Q ss_pred             HHHHHHh
Q psy12258        101 QNHRRIH  107 (171)
Q Consensus       101 ~~H~~~h  107 (171)
                      ..|++.|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            9998877

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=6.4e-18  Score=101.42  Aligned_cols=85  Identities=31%  Similarity=0.579  Sum_probs=77.3

Q ss_pred             CCCCeeCCc--cchhccCcccHHHhhhhcCCCCCccccc--chhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHH
Q psy12258         24 GLKPYGCEV--CGRHFRQWGDLKYHKASLHSDVKAFQCE--YCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSY   99 (171)
Q Consensus        24 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~   99 (171)
                      ..++|.|+.  |++.|.....|..|++ .|.++++|.|.  .|++.|.....|..|++.|+++++|.|+.|++.|.....
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHH-HHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHH-HhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            356799996  9999999999999998 58888999996  599999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcC
Q psy12258        100 LQNHRRIHTG  109 (171)
Q Consensus       100 l~~H~~~h~~  109 (171)
                      |..|++.|.+
T Consensus        91 l~~H~~~H~~  100 (100)
T 2ebt_A           91 LALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhCC
Confidence            9999998864

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.1e-17  Score=96.10  Aligned_cols=72  Identities=22%  Similarity=0.583  Sum_probs=59.1

Q ss_pred             CCCCcccccc--hhhhccChHHHHHHHh-hhcCCCCccCcc--chhhcCCHHHHHHHHHHhcCCCCccCcccccccC
Q psy12258         52 SDVKAFQCEY--CGKDFARKYSLVVHRR-IHTGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFR  123 (171)
Q Consensus        52 ~~~~~~~C~~--C~~~~~~~~~l~~h~~-~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  123 (171)
                      +++++|.|..  |++.|.....|..|++ .|.++++|.|+.  |++.|.....|..|+++|+++++|.|.+|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            3466777776  8888888888888887 688888888887  8888888888888888888888888888888873

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=6.2e-18  Score=91.63  Aligned_cols=57  Identities=35%  Similarity=0.731  Sum_probs=36.6

Q ss_pred             CCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         54 VKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ++||.|..|++.|.....|..|++.|++++||.|.+|++.|.....|..|+++|+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            456666666666666666666666666666666666666666666666666666554

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.2e-17  Score=97.42  Aligned_cols=79  Identities=19%  Similarity=0.275  Sum_probs=50.9

Q ss_pred             HHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCC----CCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         43 LKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGE----RNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        43 l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~----~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |..|++ +|.++++|.|..|++.|.....|..|+..++..    ++|.|..|++.|.....|..|+..|++++++.|..|
T Consensus         3 ~~~H~~-~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            3 SGSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTCCST-TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             cccccc-eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            344555 455566666666666666666666666555443    567777777777777777777777777777777777


Q ss_pred             cccc
Q psy12258        119 NKMF  122 (171)
Q Consensus       119 ~~~f  122 (171)
                      +.+|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            6654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=4.3e-18  Score=101.98  Aligned_cols=75  Identities=15%  Similarity=0.217  Sum_probs=66.2

Q ss_pred             ccChHHHHHHHhhhcCCCCccCccchhhcC-CHHHHHHHHHHhcC-CCCccCcccccccCCchhHHHHHHHhccCcc
Q psy12258         66 FARKYSLVVHRRIHTGERNYQCEFCHKAFR-ASSYLQNHRRIHTG-EKPHFCPVCNKMFRVRSDMKRHLNTHNVDAR  140 (171)
Q Consensus        66 ~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  140 (171)
                      +.....+..|++.|.++++|.|..|++.|. ....|..|++.|++ +++|.|.+|++.|.....|..|++.|+++..
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            334455678889999999999999999999 99999999999998 8999999999999999999999999987654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=6.3e-18  Score=98.69  Aligned_cols=81  Identities=31%  Similarity=0.522  Sum_probs=73.6

Q ss_pred             hHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCC---CcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         14 ALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDV---KAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        14 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~---~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      +|..|+++|.++++|.|++|++.|.....|..|++..|...   ++|.|..|++.|.....|..|++.|++++++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            45679999999999999999999999999999998656553   789999999999999999999999999999999999


Q ss_pred             hhhc
Q psy12258         91 HKAF   94 (171)
Q Consensus        91 ~~~~   94 (171)
                      +..+
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=1.3e-18  Score=102.21  Aligned_cols=82  Identities=27%  Similarity=0.474  Sum_probs=65.4

Q ss_pred             CCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHH
Q psy12258         25 LKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHR  104 (171)
Q Consensus        25 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~  104 (171)
                      +++|.|++|++.|.....|..|++ .|.++++|.|..|++.|.....|..|+..+++ .+|.|+.|++.|.....|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHH-HcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            467888888888888888888877 47777888888888888888888888887764 6788888888888888888888


Q ss_pred             HHhc
Q psy12258        105 RIHT  108 (171)
Q Consensus       105 ~~h~  108 (171)
                      +.++
T Consensus        79 ~~~h   82 (88)
T 1llm_C           79 ARLK   82 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=5.9e-17  Score=93.06  Aligned_cols=73  Identities=36%  Similarity=0.645  Sum_probs=66.8

Q ss_pred             CCCCCeeCCc--cchhccCcccHHHhhhhcCCCCCcccccc--hhhhccChHHHHHHHhhhcCCCCccCccchhhcC
Q psy12258         23 LGLKPYGCEV--CGRHFRQWGDLKYHKASLHSDVKAFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFR   95 (171)
Q Consensus        23 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~   95 (171)
                      .++++|.|+.  |++.|.....|..|++..|.++++|.|..  |++.|.....|..|++.|+++++|.|..|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4678899987  99999999999999985688899999998  9999999999999999999999999999998873

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1e-16  Score=90.50  Aligned_cols=63  Identities=44%  Similarity=0.760  Sum_probs=55.8

Q ss_pred             hhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccCc
Q psy12258         77 RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDA  139 (171)
Q Consensus        77 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  139 (171)
                      +.|.++++|.|+.|++.|.....|..|++.|.++++|+|++|++.|.....|..|+++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            467788899999999999999999999999999999999999999999999999999887654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.65  E-value=1.1e-16  Score=86.12  Aligned_cols=57  Identities=37%  Similarity=0.757  Sum_probs=49.3

Q ss_pred             CCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhcc
Q psy12258         81 GERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus        81 ~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      ++++|.|+.|++.|.....|..|++.|++++||.|++|++.|...+.|..|++.||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            357899999999999999999999999999999999999999999999999998874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.65  E-value=6.7e-17  Score=93.99  Aligned_cols=78  Identities=28%  Similarity=0.597  Sum_probs=57.0

Q ss_pred             CeeC--CccchhccCcccHHHhhhhcCCCCCcccccc--hhhhccChHHHHHHHhhhcCCCCccCcc---chhhcCCHHH
Q psy12258         27 PYGC--EVCGRHFRQWGDLKYHKASLHSDVKAFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCEF---CHKAFRASSY   99 (171)
Q Consensus        27 ~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~---C~~~~~~~~~   99 (171)
                      ||.|  +.|++.|.....|..|++ .|.++++|.|..  |++.|.....|..|++.|++   |.|+.   |++.|.....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-HhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            4667  677777777777777776 466677777766  77777777777777777766   77777   7777777777


Q ss_pred             HHHHHHHhc
Q psy12258        100 LQNHRRIHT  108 (171)
Q Consensus       100 l~~H~~~h~  108 (171)
                      |..|++.|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            777777653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.6e-17  Score=94.16  Aligned_cols=69  Identities=29%  Similarity=0.576  Sum_probs=58.0

Q ss_pred             HHHHhhhcCCCCccCccchhhcCCHHHHHHHHH-HhcCC-CCccCcccccccCCchhHHHHHHHhccCccc
Q psy12258         73 VVHRRIHTGERNYQCEFCHKAFRASSYLQNHRR-IHTGE-KPHFCPVCNKMFRVRSDMKRHLNTHNVDARQ  141 (171)
Q Consensus        73 ~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  141 (171)
                      ..|++.|.++++|.|+.|++.|.....|..|+. .|.++ ++|.|++|++.|.....|..|++.+|....+
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            357778888889999999999999999999987 56654 7899999999999999999999988876554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.4e-16  Score=93.86  Aligned_cols=72  Identities=19%  Similarity=0.241  Sum_probs=64.2

Q ss_pred             hccChHHHHHHHhhhcCCCCccCccchhhc-CCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHH-HHHhcc
Q psy12258         65 DFARKYSLVVHRRIHTGERNYQCEFCHKAF-RASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRH-LNTHNV  137 (171)
Q Consensus        65 ~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  137 (171)
                      .+.....|..|+..+.++++|.|+.|++.| .....|..|+++| ++++|.|.+|++.|...+.|..| +++|.+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            445667788888889999999999999999 9999999999999 99999999999999999999999 777753

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.7e-16  Score=89.01  Aligned_cols=63  Identities=21%  Similarity=0.426  Sum_probs=54.1

Q ss_pred             hhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccCcc
Q psy12258         78 IHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDAR  140 (171)
Q Consensus        78 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  140 (171)
                      .+.++++|.|..|++.|.....|..|++.|+++++|.|++|++.|.....|..|++.|+++..
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            356778899999999999999999999888888999999999999999999999988886543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.9e-16  Score=90.56  Aligned_cols=65  Identities=42%  Similarity=0.825  Sum_probs=41.9

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      +.++++|.|..|++.|.....|..|++.|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34455666666666666666666666666666666666666666666666666666666666655

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=3.3e-16  Score=89.72  Aligned_cols=64  Identities=23%  Similarity=0.392  Sum_probs=56.5

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcC---CCCccCcccccccCCchhHHHHHHHhccCcccc
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTG---EKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQY  142 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  142 (171)
                      |+++++|.|.+|++.|.....|..|++.|++   +++|.|.+|++.|.....|..|++.+|....+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999985   899999999999999999999998777665543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=7.6e-16  Score=87.31  Aligned_cols=61  Identities=31%  Similarity=0.753  Sum_probs=46.9

Q ss_pred             hhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258         78 IHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus        78 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      .+.++++|.|..|++.|.....|..|++.|.++++|+|.+|++.|...+.|..|+++|+++
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            4456677788888888888888888887777777888888888888888888888777654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=2.7e-16  Score=87.19  Aligned_cols=61  Identities=26%  Similarity=0.529  Sum_probs=53.1

Q ss_pred             hhhcCCCCccCccchhhcCCHHHHHHHHHH-h-cCCCCccCcccccccCCchhHHHHHHHhcc
Q psy12258         77 RIHTGERNYQCEFCHKAFRASSYLQNHRRI-H-TGEKPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus        77 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      ..|.++++|.|+.|++.|.....|..|+.. | .++++|.|+.|++.|...+.|..|++.||+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            457788899999999999999999999887 6 478899999999999999999999988874

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=1.4e-15  Score=86.25  Aligned_cols=64  Identities=38%  Similarity=0.826  Sum_probs=52.5

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPH  113 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~  113 (171)
                      .+.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4566778888888888888888888888888888888888888888888888888888887765

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=4.2e-16  Score=93.22  Aligned_cols=77  Identities=17%  Similarity=0.242  Sum_probs=56.2

Q ss_pred             ccCcccHHHhhhhcCCCCCcccccchhhhcc-ChHHHHHHHhhhcC-CCCccCccchhhcCCHHHHHHHHHHhcCCCCcc
Q psy12258         37 FRQWGDLKYHKASLHSDVKAFQCEYCGKDFA-RKYSLVVHRRIHTG-ERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHF  114 (171)
Q Consensus        37 f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~-~~~~l~~h~~~~~~-~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~  114 (171)
                      +.....+..|++ .|.++++|.|..|++.|. ....|..|++.|++ +++|.|.+|++.|.....|..|++.|++++|+.
T Consensus         6 ~~~~~~~~~h~~-~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            6 SGPGGPEEQWQR-AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCSCSHHHH-TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCcHHHHHH-HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            344455566666 577777777777777777 77777777777776 777888888888888888888887777777654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=3.9e-16  Score=93.59  Aligned_cols=68  Identities=19%  Similarity=0.348  Sum_probs=45.6

Q ss_pred             CCCCcccccchhhhccChHHHHHHHh-hh---cCCCCccCccchhhcCCHHHHHHH-HHHhcCCCCccCcccc
Q psy12258         52 SDVKAFQCEYCGKDFARKYSLVVHRR-IH---TGERNYQCEFCHKAFRASSYLQNH-RRIHTGEKPHFCPVCN  119 (171)
Q Consensus        52 ~~~~~~~C~~C~~~~~~~~~l~~h~~-~~---~~~~~~~C~~C~~~~~~~~~l~~H-~~~h~~~~~~~C~~C~  119 (171)
                      +++++|.|..|++.|.....|..|++ .|   .++++|.|..|++.|.....|..| +++|++++||.|.++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            45666777777777777666777765 35   345667777777777777777777 5667777777776533

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=4.3e-16  Score=90.29  Aligned_cols=60  Identities=18%  Similarity=0.427  Sum_probs=49.0

Q ss_pred             hhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhc
Q psy12258         77 RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus        77 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      ..+...++|.|++|++.|.....|..|+++|++++||.|.+|++.|...+.|.+|++..|
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence            345566778888888888888888888888888888888888888888888888875433

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=9.2e-16  Score=87.63  Aligned_cols=66  Identities=32%  Similarity=0.702  Sum_probs=61.3

Q ss_pred             HcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccC
Q psy12258         21 VHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        21 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      .+.++++|.|++|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHH-HcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4567889999999999999999999998 68889999999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=5.2e-16  Score=93.05  Aligned_cols=71  Identities=21%  Similarity=0.319  Sum_probs=63.9

Q ss_pred             HcCCCCCeeCCccchhccCcccHHHhhhhcC---CCCCcccccchhhhccChHHHHHH-HhhhcCCCCccCccch
Q psy12258         21 VHLGLKPYGCEVCGRHFRQWGDLKYHKASLH---SDVKAFQCEYCGKDFARKYSLVVH-RRIHTGERNYQCEFCH   91 (171)
Q Consensus        21 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h---~~~~~~~C~~C~~~~~~~~~l~~h-~~~~~~~~~~~C~~C~   91 (171)
                      ...+++||.|+.|++.|.....|..|++..|   .++++|.|..|++.|.....|..| ++.|++++||.|.++.
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            3467899999999999999999999997558   568899999999999999999999 8999999999998743

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.58  E-value=1.3e-15  Score=81.79  Aligned_cols=55  Identities=29%  Similarity=0.670  Sum_probs=48.4

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      ||.|+.|++.|.....|..|++.|+++++|.|+.|++.|...+.|..|+++|+.+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            5788899999999999999998888889999999999999999999998888765

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.7e-15  Score=90.12  Aligned_cols=71  Identities=15%  Similarity=0.172  Sum_probs=39.5

Q ss_pred             ccCcccHHHhhhhcCCCCCcccccchhhhc-cChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHH-HHHhcC
Q psy12258         37 FRQWGDLKYHKASLHSDVKAFQCEYCGKDF-ARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNH-RRIHTG  109 (171)
Q Consensus        37 f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~-~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H-~~~h~~  109 (171)
                      |.....+..|++ .+.++++|.|..|++.| .....|..|++.| ++++|.|.+|++.|.....|..| +.+|++
T Consensus        16 ~~~~~~~~~~~~-~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           16 YAAGSLEEQWYL-EIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SCTTCHHHHHHH-HHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCchHHHHHHH-HhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            344444444544 34445555555555555 5555555565555 55566666666666666666666 555543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=4.1e-15  Score=83.31  Aligned_cols=62  Identities=26%  Similarity=0.539  Sum_probs=40.0

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCC
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKP  112 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~  112 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|++|++.|.....|..|++.|++++|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            45556666666666666666666666666666666666666666666666666666666554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=4.5e-15  Score=80.58  Aligned_cols=56  Identities=39%  Similarity=0.750  Sum_probs=49.0

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHH-HHhccC
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHL-NTHNVD  138 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  138 (171)
                      ++|.|+.|++.|.....|..|++.|+++++|.|+.|++.|.+.+.|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47899999999999999999999999999999999999999999999997 455543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=7.2e-16  Score=88.07  Aligned_cols=63  Identities=24%  Similarity=0.442  Sum_probs=33.7

Q ss_pred             HhhhhcCCCCCcccccchhhhccChHHHHHHHh-hhcCC-CCccCccchhhcCCHHHHHHHHHHhc
Q psy12258         45 YHKASLHSDVKAFQCEYCGKDFARKYSLVVHRR-IHTGE-RNYQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        45 ~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~-~~~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      .|++ .|.++++|.|..|++.|.....|..|+. .|.++ ++|.|+.|++.|.....|..|++.++
T Consensus         5 ~H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            5 SSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCC-CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             cccc-ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            3444 4555555555555555555555555554 33332 45556566666655556666655543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=4e-17  Score=92.26  Aligned_cols=70  Identities=23%  Similarity=0.349  Sum_probs=38.0

Q ss_pred             hhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         13 TALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        13 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      ..|..|+++|.++++|.|++|++.|.....|..        +++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            345556666666666666666666666655443        3344555555555544444445444444444444443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=5.1e-15  Score=85.74  Aligned_cols=62  Identities=27%  Similarity=0.486  Sum_probs=52.0

Q ss_pred             HHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHh-hhcCC
Q psy12258         20 RVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRR-IHTGE   82 (171)
Q Consensus        20 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~   82 (171)
                      ..+...++|.|++|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++ .|.++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLR-LLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHH-TTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhh-hccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            34566778999999999999999999988 6888899999999999999999999974 56554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=9.3e-15  Score=82.31  Aligned_cols=61  Identities=51%  Similarity=0.881  Sum_probs=45.0

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +|.++++|.|..|++.|.....|..|++.|+++++|.|++|++.|.....|..|+++|+++
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            4666777777777777777777777777777777777777777777777777777777654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.1e-16  Score=90.50  Aligned_cols=72  Identities=21%  Similarity=0.314  Sum_probs=65.0

Q ss_pred             CcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         39 QWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        39 ~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      +...|..|++ .|.++++|.|..|++.|.....|..       +++|.|+.|++.|.....|..|++.|+++++|.|++|
T Consensus         2 ~~~~l~~H~~-~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSCCCCCC-CCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             cchhHHHHHH-HhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3467888987 7999999999999999999877765       7899999999999999999999999999999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=9.8e-15  Score=82.38  Aligned_cols=58  Identities=36%  Similarity=0.740  Sum_probs=42.0

Q ss_pred             hhcCCCCccCc--cchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHh
Q psy12258         78 IHTGERNYQCE--FCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus        78 ~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  135 (171)
                      .+.++++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|...+.|..|+++|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            34556677776  47777777777777777777777777777777777777777777665

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.50  E-value=1.7e-14  Score=77.42  Aligned_cols=55  Identities=42%  Similarity=0.806  Sum_probs=41.2

Q ss_pred             CCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhc
Q psy12258         54 VKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      +++|.|..|++.|.....|..|++.|+++++|.|+.|++.|.....|..|++.|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4567777788877777777778777777778888888888888888888877765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.8e-14  Score=79.69  Aligned_cols=58  Identities=21%  Similarity=0.552  Sum_probs=31.8

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhh-h-cCCCCccCccchhhcCCHHHHHHHHHHhc
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRI-H-TGERNYQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~-~-~~~~~~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      |.++++|.|..|++.|.....|..|+.. | .++++|.|+.|++.|.....|..|++.++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            4445555555555555555555555554 3 24555555555555555555555555544

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.47  E-value=4.1e-14  Score=75.85  Aligned_cols=55  Identities=29%  Similarity=0.629  Sum_probs=37.1

Q ss_pred             cccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         56 AFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ||.|..|++.|.....|..|++.|+++++|.|+.|++.|.....|..|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            3566666666666666666666666666677777777777777777776666554

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=3.1e-14  Score=80.28  Aligned_cols=67  Identities=31%  Similarity=0.659  Sum_probs=56.6

Q ss_pred             cHHHhhhhcCCCCCccccc--chhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhc
Q psy12258         42 DLKYHKASLHSDVKAFQCE--YCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        42 ~l~~H~~~~h~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      .|..|....+.++++|.|.  .|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            4555666678888999997  599999999999999999999999999999999999999999988763

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.44  E-value=1.5e-14  Score=90.64  Aligned_cols=82  Identities=20%  Similarity=0.247  Sum_probs=71.0

Q ss_pred             CCCeeCCccchhcc------CcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHH
Q psy12258         25 LKPYGCEVCGRHFR------QWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASS   98 (171)
Q Consensus        25 ~~~~~C~~C~~~f~------~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~   98 (171)
                      ++.+.|++|...|.      ....|..|+  .|.++++|.|..|++.|.....|..|++.|  +++|.|+.|++.|....
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~  114 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTD  114 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHH
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH--HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHH
Confidence            45678998888776      445566666  377789999999999999999999999998  88999999999999999


Q ss_pred             HHHHHHHHhcCC
Q psy12258         99 YLQNHRRIHTGE  110 (171)
Q Consensus        99 ~l~~H~~~h~~~  110 (171)
                      .|..|++.|++.
T Consensus       115 ~l~~H~~~h~~~  126 (129)
T 2wbt_A          115 SALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHHCCc
Confidence            999999999875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1.3e-13  Score=78.74  Aligned_cols=64  Identities=33%  Similarity=0.535  Sum_probs=44.8

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcC---CCCccCccchhhcCCHHHHHHHHH-HhcCCCCcc
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTG---ERNYQCEFCHKAFRASSYLQNHRR-IHTGEKPHF  114 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~---~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~~~~~  114 (171)
                      |+++++|.|..|++.|.....|..|++.|++   +++|.|..|++.|.....|..|++ .|.+..+..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            5566777777777777777777777777764   677777777777777777777774 354554443

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=5.7e-14  Score=77.69  Aligned_cols=57  Identities=28%  Similarity=0.536  Sum_probs=49.0

Q ss_pred             cCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc-ccccccCCchhHHHHHHHhccC
Q psy12258         80 TGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP-VCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus        80 ~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      -+.++|.|..|++.|. ...|..|+++ ++++||.|+ .|++.|...+.|..|+++|...
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            3567889999999999 8899999888 888999999 9999999999999999887644

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=3.3e-13  Score=79.87  Aligned_cols=60  Identities=33%  Similarity=0.487  Sum_probs=42.2

Q ss_pred             ccccchhhhccChHHHHHHHhh-hcCCCC--------ccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         57 FQCEYCGKDFARKYSLVVHRRI-HTGERN--------YQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        57 ~~C~~C~~~~~~~~~l~~h~~~-~~~~~~--------~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      +.|..|++.|.....|..|++. |.++++        |.|..|++.|.....|..|+++|++++||.|.
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4566666666666666666665 555555        77777777777777777777777777777775

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=3e-13  Score=73.21  Aligned_cols=51  Identities=37%  Similarity=0.737  Sum_probs=25.3

Q ss_pred             CCccccccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCC
Q psy12258          2 CDTCGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHS   52 (171)
Q Consensus         2 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~   52 (171)
                      |+.|+..|.....|..|+++|.++++|.|+.|++.|.....|..|++..|.
T Consensus         5 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            5 CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            445555555555555555555555555555555555555555555433343

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.37  E-value=4.9e-13  Score=79.12  Aligned_cols=62  Identities=32%  Similarity=0.464  Sum_probs=55.9

Q ss_pred             CeeCCccchhccCcccHHHhhhhcCCCCCc--------ccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         27 PYGCEVCGRHFRQWGDLKYHKASLHSDVKA--------FQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        27 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~--------~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .+.|+.|++.|.....|..|++..|.+.++        |.|..|++.|.....|..|++.|+++++|.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            467999999999999999999855888777        89999999999999999999999999999986

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.33  E-value=5e-13  Score=75.05  Aligned_cols=56  Identities=39%  Similarity=0.717  Sum_probs=45.0

Q ss_pred             cCCCCccCcc--chhhcCCHHHHHHHHHHhcCCCCccCcc--cccccCCchhHHHHHHHh
Q psy12258         80 TGERNYQCEF--CHKAFRASSYLQNHRRIHTGEKPHFCPV--CNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus        80 ~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  135 (171)
                      ...++|.|..  |++.|.....|..|++.|+++++|.|.+  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4456788877  8888888888888888888888888864  888888888888887754

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.33  E-value=3.6e-13  Score=68.91  Aligned_cols=44  Identities=41%  Similarity=0.665  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5e-13  Score=68.32  Aligned_cols=44  Identities=36%  Similarity=0.616  Sum_probs=31.2

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.8e-13  Score=68.11  Aligned_cols=44  Identities=34%  Similarity=0.577  Sum_probs=32.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+.+|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.7e-13  Score=68.43  Aligned_cols=44  Identities=34%  Similarity=0.497  Sum_probs=31.1

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.7e-13  Score=68.45  Aligned_cols=44  Identities=43%  Similarity=0.584  Sum_probs=30.6

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666777777777777777777777777777777777665

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.4e-13  Score=68.56  Aligned_cols=44  Identities=41%  Similarity=0.625  Sum_probs=29.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.6e-13  Score=68.91  Aligned_cols=44  Identities=39%  Similarity=0.638  Sum_probs=28.6

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5e-13  Score=68.34  Aligned_cols=44  Identities=43%  Similarity=0.646  Sum_probs=29.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.31  E-value=5e-13  Score=68.38  Aligned_cols=44  Identities=36%  Similarity=0.569  Sum_probs=29.8

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666667777777777777777777766766677776665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.2e-13  Score=68.65  Aligned_cols=44  Identities=39%  Similarity=0.640  Sum_probs=30.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666677777777777777777777777777777777665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=4.9e-13  Score=67.70  Aligned_cols=43  Identities=35%  Similarity=0.594  Sum_probs=28.8

Q ss_pred             HhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         76 RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      ++.|.++++|.|..|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4456666666676677777777777777666666666766655

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.31  E-value=3.9e-13  Score=68.79  Aligned_cols=44  Identities=41%  Similarity=0.662  Sum_probs=28.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.8e-13  Score=67.83  Aligned_cols=44  Identities=39%  Similarity=0.543  Sum_probs=31.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|..|++.|.....|..|+.+|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55566677777777777777777777777777777777777665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.31  E-value=5.1e-13  Score=68.33  Aligned_cols=44  Identities=30%  Similarity=0.532  Sum_probs=29.5

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            45556666666676677777776777777666666666766655

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.2e-13  Score=67.99  Aligned_cols=44  Identities=43%  Similarity=0.603  Sum_probs=29.8

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666667777777777777777777766766677776665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7.1e-13  Score=67.79  Aligned_cols=44  Identities=36%  Similarity=0.588  Sum_probs=31.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.1e-13  Score=68.31  Aligned_cols=44  Identities=43%  Similarity=0.705  Sum_probs=29.8

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666667777777777777777777766766677776665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.6e-13  Score=68.45  Aligned_cols=44  Identities=39%  Similarity=0.529  Sum_probs=29.5

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666676677777666677777666666666766655

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5e-13  Score=68.34  Aligned_cols=44  Identities=43%  Similarity=0.659  Sum_probs=30.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|++.|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            45556666677777777777777777777777777777777665

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.2e-13  Score=67.98  Aligned_cols=44  Identities=45%  Similarity=0.684  Sum_probs=31.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.3e-13  Score=68.24  Aligned_cols=44  Identities=39%  Similarity=0.565  Sum_probs=29.7

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666667777777777777777777766766677776665

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.7e-13  Score=67.88  Aligned_cols=44  Identities=41%  Similarity=0.617  Sum_probs=31.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.2e-13  Score=68.28  Aligned_cols=44  Identities=41%  Similarity=0.554  Sum_probs=29.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.7e-13  Score=68.46  Aligned_cols=44  Identities=48%  Similarity=0.773  Sum_probs=28.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.1e-13  Score=68.01  Aligned_cols=44  Identities=41%  Similarity=0.666  Sum_probs=29.2

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.1e-13  Score=68.32  Aligned_cols=44  Identities=45%  Similarity=0.664  Sum_probs=28.5

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=1.5e-12  Score=68.96  Aligned_cols=47  Identities=30%  Similarity=0.526  Sum_probs=37.4

Q ss_pred             hhcCCCCccCccchhhcCCHHHHHHHHH-HhcCCCCccCcccccccCC
Q psy12258         78 IHTGERNYQCEFCHKAFRASSYLQNHRR-IHTGEKPHFCPVCNKMFRV  124 (171)
Q Consensus        78 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  124 (171)
                      .+.++++|.|+.|++.|.....|..|++ +|.++++|.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3556778888888888888888888876 7888888888888888864

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.5e-13  Score=67.94  Aligned_cols=44  Identities=30%  Similarity=0.452  Sum_probs=28.2

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666655

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.3e-13  Score=68.26  Aligned_cols=44  Identities=43%  Similarity=0.640  Sum_probs=28.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.7e-13  Score=68.46  Aligned_cols=44  Identities=39%  Similarity=0.597  Sum_probs=28.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.8e-13  Score=68.83  Aligned_cols=44  Identities=34%  Similarity=0.518  Sum_probs=28.4

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.29  E-value=4.7e-13  Score=68.43  Aligned_cols=44  Identities=36%  Similarity=0.487  Sum_probs=27.2

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555566666666666666666666666666666666666554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6e-13  Score=68.07  Aligned_cols=44  Identities=32%  Similarity=0.383  Sum_probs=27.4

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|..|++.|.....|..|+.+|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44555566666666666666666666666666666666666554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=6.2e-13  Score=68.00  Aligned_cols=44  Identities=39%  Similarity=0.571  Sum_probs=27.8

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666655

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.28  E-value=6.7e-13  Score=67.84  Aligned_cols=44  Identities=41%  Similarity=0.670  Sum_probs=26.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44555556666666666666666666666666666666666554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.7e-13  Score=67.64  Aligned_cols=44  Identities=39%  Similarity=0.661  Sum_probs=25.6

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+.+|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555556666666666666666666655655566665554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=5.4e-13  Score=68.20  Aligned_cols=44  Identities=32%  Similarity=0.419  Sum_probs=27.6

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555566666666666666666666666666666666666655

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=8.9e-13  Score=67.38  Aligned_cols=44  Identities=34%  Similarity=0.555  Sum_probs=29.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666677777777777777777777777777777777665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.8e-13  Score=67.61  Aligned_cols=44  Identities=39%  Similarity=0.608  Sum_probs=28.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666655

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.2e-13  Score=67.99  Aligned_cols=44  Identities=34%  Similarity=0.615  Sum_probs=28.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666655

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=9.5e-13  Score=67.28  Aligned_cols=44  Identities=23%  Similarity=0.283  Sum_probs=28.5

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.3e-13  Score=67.71  Aligned_cols=44  Identities=32%  Similarity=0.359  Sum_probs=28.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+.+|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666655

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.2e-13  Score=68.27  Aligned_cols=44  Identities=41%  Similarity=0.646  Sum_probs=26.1

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34455555666666666666666666666666666666666554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.27  E-value=1.2e-12  Score=66.90  Aligned_cols=44  Identities=32%  Similarity=0.485  Sum_probs=29.2

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34556666666666666666666666667666666666666655

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=67.14  Aligned_cols=44  Identities=32%  Similarity=0.496  Sum_probs=28.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34556666666666666666666666666666666666666655

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.9e-13  Score=68.75  Aligned_cols=44  Identities=34%  Similarity=0.591  Sum_probs=26.2

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555666666666666666666666666666666666554

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=8.2e-13  Score=67.52  Aligned_cols=44  Identities=43%  Similarity=0.637  Sum_probs=28.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666543

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.5e-12  Score=66.75  Aligned_cols=44  Identities=39%  Similarity=0.544  Sum_probs=30.5

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHH-HhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRR-IHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|..|++.|.....|..|++ +|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4556666677777777777777777777776 6777777777665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.4e-12  Score=71.99  Aligned_cols=56  Identities=20%  Similarity=0.323  Sum_probs=32.1

Q ss_pred             CCCcccccchhhhccChHHHHHHHhhhcCCCCccCc-cchhhcCCHHHHHHHHHHhcCC
Q psy12258         53 DVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE-FCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        53 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~-~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +.++|.|..|++.|. ...|..|++. .++++|.|+ .|++.|.....|..|+++|...
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            345555555555555 5555555555 555566666 5666665555666665555443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.1e-12  Score=65.97  Aligned_cols=44  Identities=41%  Similarity=0.637  Sum_probs=29.4

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      |++.|.++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666667777777777777777777766766677766653

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.22  E-value=5.3e-12  Score=64.12  Aligned_cols=42  Identities=26%  Similarity=0.509  Sum_probs=29.4

Q ss_pred             hhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccc
Q psy12258         78 IHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCN  119 (171)
Q Consensus        78 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~  119 (171)
                      .|+++++|.|..|++.|.....|..|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            355666777777777777777777777777777777777665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.21  E-value=1.7e-13  Score=74.79  Aligned_cols=52  Identities=15%  Similarity=0.316  Sum_probs=40.7

Q ss_pred             HHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhH
Q psy12258         74 VHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDM  128 (171)
Q Consensus        74 ~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  128 (171)
                      .|++.|.++++|.|+.|++.|.....|.   .+|++++||.|+.||+.|....++
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            4667778888888888888888777775   678888888888888888766543

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=5.8e-12  Score=64.92  Aligned_cols=42  Identities=31%  Similarity=0.513  Sum_probs=29.0

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccccc
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNK  120 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~  120 (171)
                      +.++++|.|.+|++.|.....|..|+++|++++||.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            445566777777777777777777777777777777777764

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.20  E-value=4.5e-12  Score=63.39  Aligned_cols=40  Identities=35%  Similarity=0.590  Sum_probs=24.4

Q ss_pred             HhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         76 RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      ++.|+++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            3445556666666666666666666666666666666655

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.4e-12  Score=62.77  Aligned_cols=40  Identities=25%  Similarity=0.512  Sum_probs=26.3

Q ss_pred             HhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         76 RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      ++.|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3455666666666666666666666666666666666665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.4e-12  Score=65.19  Aligned_cols=40  Identities=40%  Similarity=0.679  Sum_probs=19.3

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4444444444444444444444444444444444544443

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.5e-12  Score=65.09  Aligned_cols=40  Identities=35%  Similarity=0.564  Sum_probs=19.3

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            4444444444444444444444444444444444444443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.18  E-value=5.4e-12  Score=64.40  Aligned_cols=42  Identities=45%  Similarity=0.709  Sum_probs=25.7

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555566666666666666666666666666666666664

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.7e-12  Score=64.32  Aligned_cols=42  Identities=38%  Similarity=0.508  Sum_probs=27.9

Q ss_pred             hhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         77 RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        77 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      +.|.++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345566666666666666666666666666666666666665

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=4.9e-12  Score=64.57  Aligned_cols=42  Identities=48%  Similarity=0.683  Sum_probs=25.6

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            445555566666666666666666666666666666666654

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.9e-12  Score=64.92  Aligned_cols=44  Identities=25%  Similarity=0.437  Sum_probs=24.3

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccch
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYC   62 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   62 (171)
                      |+++|.++++|.|++|++.|.....|..|++ .|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQR-VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGG-GGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            4445555555555555555555555555554 4555555555544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.2e-12  Score=64.45  Aligned_cols=44  Identities=27%  Similarity=0.339  Sum_probs=23.2

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccch
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYC   62 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   62 (171)
                      |+++|.++++|.|++|++.|.....|..|++ .|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHH-HCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            4444555555555555555555555555554 3555555555443

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.1e-11  Score=63.19  Aligned_cols=41  Identities=34%  Similarity=0.643  Sum_probs=24.0

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            45555556666666666666566666666655666666554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.3e-11  Score=62.97  Aligned_cols=44  Identities=30%  Similarity=0.545  Sum_probs=26.5

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGS-SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             Ccc-cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            444 45556666666666666666666666666666666666554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.4e-12  Score=64.10  Aligned_cols=42  Identities=40%  Similarity=0.716  Sum_probs=25.6

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555566666666666666666666666666666666654

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5e-12  Score=64.53  Aligned_cols=42  Identities=50%  Similarity=0.818  Sum_probs=27.3

Q ss_pred             hhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         77 RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        77 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      +.|+++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            445566666666666666666666666666666666666655

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.3e-12  Score=64.44  Aligned_cols=42  Identities=43%  Similarity=0.721  Sum_probs=25.1

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            444555556666666666666666666666666666666654

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.3e-11  Score=62.90  Aligned_cols=44  Identities=30%  Similarity=0.489  Sum_probs=28.4

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGS-SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSS-CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCC-CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 46666666666666666666666666666666666666655

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.4e-12  Score=64.11  Aligned_cols=42  Identities=45%  Similarity=0.687  Sum_probs=26.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            445555666666666666666666666666666666666664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.4e-12  Score=63.63  Aligned_cols=42  Identities=43%  Similarity=0.667  Sum_probs=27.4

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445566666666666666666666666666666666666664

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7e-12  Score=63.95  Aligned_cols=42  Identities=45%  Similarity=0.708  Sum_probs=26.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445566666666666666666666666666666666666664

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.4e-12  Score=63.67  Aligned_cols=42  Identities=31%  Similarity=0.612  Sum_probs=27.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445566666666666666666666666666666666666664

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.3e-11  Score=62.99  Aligned_cols=41  Identities=34%  Similarity=0.554  Sum_probs=22.7

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            6 SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            35555555555555555555555555555555555555544

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.4e-12  Score=64.40  Aligned_cols=42  Identities=50%  Similarity=0.720  Sum_probs=25.5

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555566666666666666666666666666666666654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.4e-12  Score=63.87  Aligned_cols=42  Identities=36%  Similarity=0.576  Sum_probs=26.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445556666666666666666666666666666666666664

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.17  E-value=1.4e-11  Score=62.88  Aligned_cols=44  Identities=30%  Similarity=0.574  Sum_probs=29.3

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGS-SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCC-ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 46666667777777777777677777767766677776655

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.4e-12  Score=64.08  Aligned_cols=42  Identities=52%  Similarity=0.756  Sum_probs=24.8

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            444555555666666666666666666666666666666554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.6e-12  Score=64.03  Aligned_cols=42  Identities=45%  Similarity=0.677  Sum_probs=25.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            444555566666666666666666666666666666666654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7e-12  Score=63.97  Aligned_cols=42  Identities=45%  Similarity=0.697  Sum_probs=26.5

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            445555666666666666666666666666666666666664

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.3e-11  Score=62.93  Aligned_cols=41  Identities=32%  Similarity=0.563  Sum_probs=25.5

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666654

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.17  E-value=1.4e-11  Score=62.83  Aligned_cols=41  Identities=24%  Similarity=0.408  Sum_probs=23.6

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            6 SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            35555555555555555555555555555555555555544

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.7e-12  Score=63.44  Aligned_cols=42  Identities=40%  Similarity=0.659  Sum_probs=26.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445566666666666666666666666666666666666664

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.17  E-value=1.2e-11  Score=63.05  Aligned_cols=40  Identities=35%  Similarity=0.576  Sum_probs=20.2

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4444555555555555555555555555555555555443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.5e-11  Score=62.71  Aligned_cols=44  Identities=32%  Similarity=0.547  Sum_probs=28.8

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGS-SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCC-CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCC-CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 46666666666666666666666666666666666666655

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.16  E-value=1.4e-11  Score=62.78  Aligned_cols=41  Identities=34%  Similarity=0.578  Sum_probs=24.9

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.3e-11  Score=62.98  Aligned_cols=44  Identities=27%  Similarity=0.546  Sum_probs=30.7

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGS-SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCC-CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444 46667777777777777777777777777777777777665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.6e-11  Score=61.95  Aligned_cols=41  Identities=32%  Similarity=0.453  Sum_probs=25.5

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8e-12  Score=63.75  Aligned_cols=42  Identities=45%  Similarity=0.758  Sum_probs=26.4

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445556666666666666666666666666666666666664

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.3e-11  Score=62.89  Aligned_cols=44  Identities=34%  Similarity=0.511  Sum_probs=30.4

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccc-ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 46666777777777777777777777777777777777665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2e-11  Score=62.22  Aligned_cols=41  Identities=34%  Similarity=0.626  Sum_probs=26.0

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            6 SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.16  E-value=1.7e-11  Score=62.48  Aligned_cols=41  Identities=37%  Similarity=0.638  Sum_probs=21.1

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555444

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9e-12  Score=63.55  Aligned_cols=42  Identities=50%  Similarity=0.742  Sum_probs=26.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|+++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445556666666666666666666666666666666666664

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8e-12  Score=63.73  Aligned_cols=42  Identities=48%  Similarity=0.704  Sum_probs=26.1

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            445555666666666666666666666666666666666664

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.4e-11  Score=62.84  Aligned_cols=41  Identities=34%  Similarity=0.683  Sum_probs=25.7

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            6 SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.6e-11  Score=62.61  Aligned_cols=41  Identities=37%  Similarity=0.574  Sum_probs=22.5

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35555555555555555555555555555555555555544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.16  E-value=2.1e-11  Score=68.32  Aligned_cols=57  Identities=37%  Similarity=0.815  Sum_probs=44.3

Q ss_pred             CCCCCcccccc--hhhhccChHHHHHHHhhhcCCCCccCcc--chhhcCCHHHHHHHHHHh
Q psy12258         51 HSDVKAFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCEF--CHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        51 h~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h  107 (171)
                      ....++|.|..  |++.|.....|..|++.|+++++|.|++  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            44566788877  8888888888888888888888888854  888888888888887654

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2e-11  Score=62.18  Aligned_cols=41  Identities=39%  Similarity=0.588  Sum_probs=22.8

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            35555555555555555555555555555555555555544

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.1e-12  Score=64.22  Aligned_cols=42  Identities=38%  Similarity=0.547  Sum_probs=25.4

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555566666666666666666666666666666666654

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.4e-11  Score=62.85  Aligned_cols=44  Identities=25%  Similarity=0.428  Sum_probs=29.7

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGS-SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCC-CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            444 46666667777777777777777777777777777777655

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.4e-11  Score=62.80  Aligned_cols=44  Identities=34%  Similarity=0.512  Sum_probs=29.0

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGS-SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             Ccc-cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            444 46666666666666666666666666666666666766655

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.4e-12  Score=63.89  Aligned_cols=42  Identities=43%  Similarity=0.752  Sum_probs=26.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            345555666666666666666666666666666666666664

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.7e-11  Score=62.53  Aligned_cols=41  Identities=29%  Similarity=0.500  Sum_probs=24.0

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|+..|+++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35555556666666666666566666555655566665554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.4e-12  Score=63.84  Aligned_cols=42  Identities=43%  Similarity=0.671  Sum_probs=25.4

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555566666666666666666666666666666666654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.7e-11  Score=62.45  Aligned_cols=44  Identities=39%  Similarity=0.539  Sum_probs=27.6

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGS-SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCC-CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             Ccc-ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            444 45566666666666666666666666666666666666654

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.9e-11  Score=62.27  Aligned_cols=41  Identities=39%  Similarity=0.624  Sum_probs=24.1

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|+..|+++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555556666666666666666666666655666666554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.6e-11  Score=62.58  Aligned_cols=41  Identities=34%  Similarity=0.595  Sum_probs=23.6

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.8e-11  Score=62.41  Aligned_cols=41  Identities=41%  Similarity=0.666  Sum_probs=21.4

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.7e-11  Score=62.48  Aligned_cols=41  Identities=37%  Similarity=0.646  Sum_probs=20.9

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|+..|+++++|.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555443

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.4e-11  Score=62.81  Aligned_cols=40  Identities=40%  Similarity=0.594  Sum_probs=19.8

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4444445555555555555555555555555555555443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.6e-11  Score=62.61  Aligned_cols=41  Identities=34%  Similarity=0.529  Sum_probs=21.7

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555544

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.7e-11  Score=62.47  Aligned_cols=40  Identities=28%  Similarity=0.514  Sum_probs=20.6

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |.++++|.|..|++.|.....|..|+..|+++++|.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4445555555555555555555555555555555555443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.6e-12  Score=63.80  Aligned_cols=42  Identities=48%  Similarity=0.706  Sum_probs=24.0

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            344455555555655665665555666665555555555554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.4e-11  Score=61.92  Aligned_cols=44  Identities=30%  Similarity=0.487  Sum_probs=33.9

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         3 h~~-~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGS-SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCC-CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCc-CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444 57777788888888888888888888888888888888766

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.15  E-value=1.8e-11  Score=62.33  Aligned_cols=41  Identities=29%  Similarity=0.555  Sum_probs=21.7

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            6 SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555544

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1e-11  Score=62.66  Aligned_cols=41  Identities=44%  Similarity=0.653  Sum_probs=26.2

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            44555666666666666666666666666666666666665

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2.2e-11  Score=62.08  Aligned_cols=41  Identities=32%  Similarity=0.540  Sum_probs=22.0

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.4e-11  Score=61.95  Aligned_cols=41  Identities=32%  Similarity=0.555  Sum_probs=21.5

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555544

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.8e-12  Score=63.79  Aligned_cols=42  Identities=38%  Similarity=0.543  Sum_probs=25.5

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            444555566666666666666666666666666666666654

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.8e-11  Score=62.40  Aligned_cols=41  Identities=32%  Similarity=0.531  Sum_probs=21.1

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.9e-11  Score=62.26  Aligned_cols=44  Identities=34%  Similarity=0.523  Sum_probs=30.4

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         3 h~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGS-SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSC-CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCC-ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            444 46666777777777777777777777777777777777665

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.1e-11  Score=62.53  Aligned_cols=41  Identities=41%  Similarity=0.657  Sum_probs=23.8

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      |++.|.++++|.|+.|++.|.....|..|+.+|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            34455555556666666666666666666655555555555

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.3e-12  Score=63.46  Aligned_cols=42  Identities=45%  Similarity=0.714  Sum_probs=24.4

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344555555566666666666666666666666556666554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=7.7e-12  Score=63.17  Aligned_cols=41  Identities=24%  Similarity=0.534  Sum_probs=22.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      |++.|.++++|.|+.|++.|.....|..|+.+|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            34445555555555555555555555555555555555554

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.5e-11  Score=62.70  Aligned_cols=41  Identities=32%  Similarity=0.556  Sum_probs=24.8

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.2e-12  Score=62.86  Aligned_cols=41  Identities=29%  Similarity=0.518  Sum_probs=24.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      |++.|.++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            44455555666666666666666666666666666666655

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.1e-11  Score=62.12  Aligned_cols=41  Identities=34%  Similarity=0.670  Sum_probs=23.0

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            35555555555555555555555555555555555555544

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.13  E-value=2.9e-11  Score=63.84  Aligned_cols=45  Identities=33%  Similarity=0.546  Sum_probs=26.1

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHh-hhcCCCCccCccchhhcC
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRR-IHTGERNYQCEFCHKAFR   95 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~~~~~C~~C~~~~~   95 (171)
                      |.++++|.|..|++.|.....|..|++ .|.++++|.|.+|++.|.
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            444555566666666665555666654 555556666666665554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.9e-11  Score=61.60  Aligned_cols=41  Identities=32%  Similarity=0.459  Sum_probs=27.4

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|+|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46666666666666666666666666666666666666655

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3e-11  Score=61.52  Aligned_cols=41  Identities=34%  Similarity=0.506  Sum_probs=21.1

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555444

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=63.06  Aligned_cols=42  Identities=33%  Similarity=0.525  Sum_probs=25.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555666666666666666666666666666666666664

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.12  E-value=3e-11  Score=61.56  Aligned_cols=41  Identities=32%  Similarity=0.566  Sum_probs=22.6

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35555555555555555555555555555555555555544

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-11  Score=61.87  Aligned_cols=41  Identities=37%  Similarity=0.630  Sum_probs=23.6

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      |++.|+++++|.|+.|++.|.....|..|+.+|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34445555556666666666666666666555555555554

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.2e-11  Score=61.45  Aligned_cols=41  Identities=34%  Similarity=0.587  Sum_probs=29.4

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            46667777777777777777777777777777777777665

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=61.60  Aligned_cols=39  Identities=33%  Similarity=0.662  Sum_probs=19.1

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCcc
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEF   89 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~   89 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            444444455555555554444555544444444554443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.6e-11  Score=61.99  Aligned_cols=40  Identities=18%  Similarity=0.398  Sum_probs=21.2

Q ss_pred             HhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         76 RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      ++.|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            4 GSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             ccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            3444455555555555555555555555555555555554

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.6e-11  Score=62.52  Aligned_cols=42  Identities=43%  Similarity=0.685  Sum_probs=25.1

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |++.|.++++|.|+.|++.|.....|..|+..|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555556666666666666666666666666666666654

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.10  E-value=2e-11  Score=60.91  Aligned_cols=39  Identities=28%  Similarity=0.441  Sum_probs=21.5

Q ss_pred             hhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         77 RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        77 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      +.|.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            344555555555555555555555555555555555554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.6e-11  Score=61.35  Aligned_cols=40  Identities=40%  Similarity=0.698  Sum_probs=22.0

Q ss_pred             HhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         76 RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      ++.|.++++|.|..|++.|.....|..|++.|++++||+|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3444555555555555555555555555555555555554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.9e-11  Score=61.00  Aligned_cols=40  Identities=30%  Similarity=0.495  Sum_probs=24.6

Q ss_pred             HhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         76 RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      ++.|.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            4445556666666666666666666666666666666655

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.7e-11  Score=62.54  Aligned_cols=41  Identities=41%  Similarity=0.788  Sum_probs=23.4

Q ss_pred             HhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         76 RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      ++.|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34455555555555555555555555555555555555553

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.10  E-value=1e-11  Score=65.65  Aligned_cols=44  Identities=23%  Similarity=0.529  Sum_probs=21.8

Q ss_pred             cCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhcc
Q psy12258         94 FRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus        94 ~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      |.....|..|++.|.++++|.|..|++.|...+.|..|+++|.+
T Consensus         6 ~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   49 (54)
T 1yui_A            6 AKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             CSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT
T ss_pred             cCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            33444444455555555555555555555555555555555443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.3e-11  Score=60.85  Aligned_cols=41  Identities=34%  Similarity=0.537  Sum_probs=23.6

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHh-hhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRR-IHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++ .|.++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3555555555555555555555555555 5555555655554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.4e-11  Score=62.83  Aligned_cols=41  Identities=34%  Similarity=0.587  Sum_probs=21.6

Q ss_pred             HhhhcCCCCccCccchhhcCCHHHHHHHHHHhcC-CCCccCc
Q psy12258         76 RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTG-EKPHFCP  116 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~-~~~~~C~  116 (171)
                      ++.|.++++|.|..|++.|.....|..|+++|++ ++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444455555555555555555555555555555 5555553

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.4e-11  Score=61.47  Aligned_cols=39  Identities=36%  Similarity=0.596  Sum_probs=19.7

Q ss_pred             hhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         77 RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        77 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      +.|.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            344444555555555555555555555555555555444

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=2.6e-12  Score=72.67  Aligned_cols=66  Identities=18%  Similarity=0.321  Sum_probs=52.7

Q ss_pred             HHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccCc
Q psy12258         71 SLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDA  139 (171)
Q Consensus        71 ~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  139 (171)
                      .|..|+..+.+.+++.|+.|+..| ....|..|+ .+.+++|+.|+.|++.|. ...|..|+++|.+..
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            355677777788888888888888 488888888 788888899999998876 578888888876553

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.1e-11  Score=60.81  Aligned_cols=37  Identities=27%  Similarity=0.530  Sum_probs=18.5

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccC
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4444445555555555555555555555555555444

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-11  Score=62.29  Aligned_cols=41  Identities=29%  Similarity=0.455  Sum_probs=22.8

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      |++.|.++++|.|..|++.|.....|..|+.+|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            34445555555555555555555555555555555555555

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=8.2e-11  Score=59.59  Aligned_cols=42  Identities=29%  Similarity=0.414  Sum_probs=33.0

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccch
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCH   91 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~   91 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            466777788888888888888888888888888888888775

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=8.8e-11  Score=58.90  Aligned_cols=39  Identities=18%  Similarity=0.323  Sum_probs=25.7

Q ss_pred             hhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         78 IHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        78 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      .|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            355566666666666666666666666666666666664

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=6.6e-11  Score=60.26  Aligned_cols=40  Identities=45%  Similarity=0.644  Sum_probs=26.4

Q ss_pred             hhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         77 RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        77 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      +.|+++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4455666666666666666666666666666666666664

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-11  Score=62.69  Aligned_cols=40  Identities=33%  Similarity=0.434  Sum_probs=19.6

Q ss_pred             HhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         76 RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      ++.|+++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444455555555555555555555544544444444

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.3e-11  Score=59.86  Aligned_cols=40  Identities=40%  Similarity=0.627  Sum_probs=24.6

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCcc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEF   89 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~   89 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4555666666666666666666666666666666666654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.9e-11  Score=60.53  Aligned_cols=40  Identities=35%  Similarity=0.522  Sum_probs=20.6

Q ss_pred             HhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         76 RRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        76 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      ++.|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            3444455555555555555555555555555555555544

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.4e-11  Score=61.36  Aligned_cols=41  Identities=24%  Similarity=0.464  Sum_probs=19.7

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccc
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQC   59 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   59 (171)
                      |+++|.++++|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHT-TTSCCCCCSS
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHH-HhCCCCCCCC
Confidence            3344444445555555555555555555544 3444444444

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.05  E-value=1.8e-11  Score=64.71  Aligned_cols=49  Identities=18%  Similarity=0.167  Sum_probs=25.0

Q ss_pred             ccCChhhHHHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcc
Q psy12258          8 SFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAF   57 (171)
Q Consensus         8 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~   57 (171)
                      .|.....|..|+++|.++++|.|++|++.|.....|..|++ .|.++++|
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE-LRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH-HHTTTSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH-HhccCCCC
Confidence            34444455555555555555555555555555555555554 34444443

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=4.5e-11  Score=60.27  Aligned_cols=41  Identities=24%  Similarity=0.412  Sum_probs=23.0

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccc
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQC   59 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   59 (171)
                      |+++|.++++|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHER-THARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHH-HCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhH-hcCCCCCCCC
Confidence            4445555555555555555555555555554 3555555555

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.1e-11  Score=61.01  Aligned_cols=41  Identities=32%  Similarity=0.538  Sum_probs=20.2

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccc
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQC   59 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   59 (171)
                      |+++|.++++|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~C   43 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRR-IHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGG-GTSSCCSSCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHH-hcCCCCCcCC
Confidence            3444445555555555555555555555544 3444444444

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.2e-11  Score=60.97  Aligned_cols=41  Identities=24%  Similarity=0.428  Sum_probs=20.0

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccc
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQC   59 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   59 (171)
                      |+++|.++++|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQR-THTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHH-TSCSSSSSCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHH-HhCCCCCCCC
Confidence            3344444555555555555555555555544 3444444444

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.5e-11  Score=61.41  Aligned_cols=42  Identities=36%  Similarity=0.512  Sum_probs=27.2

Q ss_pred             hhhcCCCCccCc--cchhhcCCHHHHHHHHHHhcCCCCccCccc
Q psy12258         77 RIHTGERNYQCE--FCHKAFRASSYLQNHRRIHTGEKPHFCPVC  118 (171)
Q Consensus        77 ~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C  118 (171)
                      +.|+++++|.|.  .|++.|.....|..|+++|++++||+|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345566666665  566666666666666666666666666655

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.1e-10  Score=59.99  Aligned_cols=41  Identities=34%  Similarity=0.574  Sum_probs=26.0

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccch
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCH   91 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~   91 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|.+|+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            44555666666666666666666666666666666666665

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.3e-11  Score=60.96  Aligned_cols=38  Identities=34%  Similarity=0.658  Sum_probs=18.8

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            44444455555555555555555555455444555443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.03  E-value=1.4e-10  Score=57.77  Aligned_cols=37  Identities=38%  Similarity=0.739  Sum_probs=18.7

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccC
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            4444455555555555555555555555555555544

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.2e-11  Score=59.72  Aligned_cols=41  Identities=32%  Similarity=0.557  Sum_probs=20.9

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccc
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQC   59 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   59 (171)
                      |+++|.++++|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-VHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGG-GTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHH-HhCCCCCCCC
Confidence            3444555555555555555555555555554 3555555443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.03  E-value=1.3e-10  Score=59.13  Aligned_cols=39  Identities=38%  Similarity=0.668  Sum_probs=23.7

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            6 SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455556666666666666666666666666666666654

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5e-11  Score=60.43  Aligned_cols=39  Identities=44%  Similarity=0.785  Sum_probs=21.4

Q ss_pred             hhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         78 IHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        78 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      .|.++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            344555555555555555555555555555555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.4e-10  Score=58.99  Aligned_cols=39  Identities=38%  Similarity=0.674  Sum_probs=24.8

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            6 SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             ccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455666666666666666666666666666666666664

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=7.1e-11  Score=60.13  Aligned_cols=42  Identities=21%  Similarity=0.309  Sum_probs=24.9

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCC-CCccccc
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSD-VKAFQCE   60 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~~C~   60 (171)
                      |+++|.++++|.|++|++.|.....|..|++ .|.+ +++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            4455556666666666666666666666655 4555 5555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.02  E-value=2.8e-12  Score=69.85  Aligned_cols=51  Identities=16%  Similarity=0.449  Sum_probs=31.2

Q ss_pred             HHHHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhccChH
Q psy12258         16 KVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKY   70 (171)
Q Consensus        16 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~   70 (171)
                      ..|+++|.++++|.|+.|++.|.....|.    ..|.++++|.|..|++.|....
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEECT
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccccCc
Confidence            34556666666677777776666655544    2566666666666666665443

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=58.94  Aligned_cols=42  Identities=29%  Similarity=0.552  Sum_probs=25.2

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         3 H~~-~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGS-SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCC-CCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 455566666666666666666666666666666666654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=58.95  Aligned_cols=39  Identities=38%  Similarity=0.650  Sum_probs=19.8

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            6 SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            344445555555555555555555555555555555543

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.4e-11  Score=59.85  Aligned_cols=41  Identities=32%  Similarity=0.575  Sum_probs=22.3

Q ss_pred             HHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCccccc
Q psy12258         19 NRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCE   60 (171)
Q Consensus        19 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   60 (171)
                      +++|.++++|.|++|++.|.....|..|++ .|.++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQR-VHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGG-GSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            344555555555555555555555555554 45555555553

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.5e-10  Score=58.81  Aligned_cols=39  Identities=31%  Similarity=0.624  Sum_probs=24.2

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            6 SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            455566666666666666666666666666666666664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.8e-10  Score=58.54  Aligned_cols=39  Identities=41%  Similarity=0.697  Sum_probs=22.6

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            6 SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            355555555555665555555555565555555555554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2e-10  Score=58.35  Aligned_cols=42  Identities=36%  Similarity=0.602  Sum_probs=29.1

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         3 H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGS-SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSS-SSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCc-CcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            444 466667777777777777777777777777777777765

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.6e-10  Score=58.71  Aligned_cols=39  Identities=36%  Similarity=0.657  Sum_probs=21.6

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            355555555555555555555555555555555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2e-10  Score=58.43  Aligned_cols=39  Identities=44%  Similarity=0.703  Sum_probs=21.7

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            6 SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            355555555555555555555555555555555555554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2e-10  Score=58.37  Aligned_cols=39  Identities=36%  Similarity=0.580  Sum_probs=22.3

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            6 SGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             SCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            355555555555555555555555555555555555554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=6e-11  Score=59.17  Aligned_cols=39  Identities=36%  Similarity=0.639  Sum_probs=18.8

Q ss_pred             HHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccc
Q psy12258         20 RVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQC   59 (171)
Q Consensus        20 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   59 (171)
                      ++|.++++|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTT-TTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHH-hcCCCCCCCC
Confidence            34444455555555555555555555544 3444444443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=58.53  Aligned_cols=41  Identities=32%  Similarity=0.473  Sum_probs=32.3

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56777778888888888888888888888888888888766

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.2e-10  Score=58.23  Aligned_cols=39  Identities=38%  Similarity=0.695  Sum_probs=20.7

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            6 SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555555555555553

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.6e-10  Score=58.75  Aligned_cols=39  Identities=36%  Similarity=0.622  Sum_probs=21.3

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            345555555555555555555555555555555555554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=58.46  Aligned_cols=39  Identities=33%  Similarity=0.691  Sum_probs=20.6

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            6 SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344555555555555555555555555555555555553

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.2e-10  Score=58.23  Aligned_cols=39  Identities=41%  Similarity=0.663  Sum_probs=26.5

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            466666666777777777666676776666666666665

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.7e-10  Score=57.91  Aligned_cols=41  Identities=37%  Similarity=0.574  Sum_probs=22.9

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555544

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.99  E-value=7.3e-11  Score=58.80  Aligned_cols=37  Identities=27%  Similarity=0.495  Sum_probs=19.1

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccC
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            4444555555555555555555555555555555544

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2e-10  Score=58.41  Aligned_cols=42  Identities=29%  Similarity=0.427  Sum_probs=28.0

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         3 H~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCC-CCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccc-cCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 466666677777777777776777777677666676664

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.6e-11  Score=60.63  Aligned_cols=41  Identities=22%  Similarity=0.433  Sum_probs=20.2

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccc
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQC   59 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   59 (171)
                      |+++|.++++|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQK-IHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHH-HHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHH-HhCCCCCCCC
Confidence            3444445555555555555555555555544 3444444444

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.2e-10  Score=58.22  Aligned_cols=39  Identities=33%  Similarity=0.604  Sum_probs=21.1

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            6 SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             ccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555555555555555555555555555555555553

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.6e-10  Score=57.92  Aligned_cols=39  Identities=33%  Similarity=0.669  Sum_probs=20.0

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            6 SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             SCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            344455555555555555555555555555555555543

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.5e-10  Score=57.33  Aligned_cols=37  Identities=43%  Similarity=0.795  Sum_probs=18.7

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFC  115 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C  115 (171)
                      |.++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3444455555555555555555555555555555544

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.1e-10  Score=58.29  Aligned_cols=39  Identities=38%  Similarity=0.695  Sum_probs=23.6

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            6 SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             ccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            455556666666666666666666666666666666654

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.4e-10  Score=57.44  Aligned_cols=37  Identities=38%  Similarity=0.695  Sum_probs=18.8

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccC
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      |.++++|.|..|++.|.....|..|+..|+++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            4444555555555555555555555555555555544

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.2e-10  Score=58.22  Aligned_cols=38  Identities=42%  Similarity=0.733  Sum_probs=19.0

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44444555555555555555555555555555555443

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.4e-10  Score=57.47  Aligned_cols=37  Identities=38%  Similarity=0.733  Sum_probs=19.1

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccC
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            4444555555555555555555555555555555544

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.7e-10  Score=57.32  Aligned_cols=38  Identities=32%  Similarity=0.622  Sum_probs=20.1

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccC
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            6 SGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             ccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            34455555555555555555555555555555555554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=3.1e-10  Score=57.07  Aligned_cols=37  Identities=19%  Similarity=0.463  Sum_probs=18.7

Q ss_pred             CCCCCcccccchhhhccChHHHHHHHhhhcCCCCccC
Q psy12258         51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        51 h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      |.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            7 GHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            4444455555555555555555555555555555544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.4e-10  Score=58.48  Aligned_cols=41  Identities=29%  Similarity=0.458  Sum_probs=19.4

Q ss_pred             HHHHcCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccc
Q psy12258         18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQC   59 (171)
Q Consensus        18 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   59 (171)
                      |+++|.++++|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHER-THAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHG-GGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHh-HhcCCCCCCC
Confidence            3344444445555555555555555555544 3444444433

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.7e-10  Score=57.91  Aligned_cols=42  Identities=31%  Similarity=0.573  Sum_probs=30.1

Q ss_pred             hhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         46 HKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        46 H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      |++ .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         3 h~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGS-SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCS-CSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCc-CCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444 566777777777777777777777777777777777775

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.94  E-value=2.5e-10  Score=55.11  Aligned_cols=35  Identities=31%  Similarity=0.581  Sum_probs=27.9

Q ss_pred             HHHHhcCCCCccCcccccccCCchhHHHHHHHhcc
Q psy12258        103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       103 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      |++.|.+++||+|+.|++.|...+.|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            55667788888888888888888888888887764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.5e-10  Score=57.43  Aligned_cols=39  Identities=33%  Similarity=0.637  Sum_probs=20.9

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            6 SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555555555555555555555555555555555553

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.8e-10  Score=56.14  Aligned_cols=38  Identities=32%  Similarity=0.519  Sum_probs=25.1

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccC
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45666666666666666666666666666666666655

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=6.5e-10  Score=55.87  Aligned_cols=38  Identities=26%  Similarity=0.487  Sum_probs=25.9

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccC
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQC   87 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C   87 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            45666667777777777776667777777766666666

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.1e-10  Score=57.63  Aligned_cols=39  Identities=31%  Similarity=0.458  Sum_probs=23.7

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            6 SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455556666666666666666666666666666666654

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.90  E-value=1.4e-09  Score=54.42  Aligned_cols=39  Identities=23%  Similarity=0.286  Sum_probs=26.9

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            355666677777777777777777777777777777665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.3e-10  Score=58.06  Aligned_cols=40  Identities=33%  Similarity=0.489  Sum_probs=20.9

Q ss_pred             CCCCCccccc--chhhhccChHHHHHHHhhhcCCCCccCccc
Q psy12258         51 HSDVKAFQCE--YCGKDFARKYSLVVHRRIHTGERNYQCEFC   90 (171)
Q Consensus        51 h~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C   90 (171)
                      |.++++|.|.  .|++.|.....|..|++.|+++++|+|..|
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4445555554  455555555555555555555555555444

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.4e-09  Score=54.91  Aligned_cols=39  Identities=44%  Similarity=0.750  Sum_probs=23.1

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            355555566666666666666666666666666666554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=2.5e-09  Score=54.25  Aligned_cols=39  Identities=33%  Similarity=0.585  Sum_probs=26.9

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCc
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCE   88 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~   88 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            456666677777777777777777777777777777664

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.8e-10  Score=65.07  Aligned_cols=65  Identities=18%  Similarity=0.312  Sum_probs=42.4

Q ss_pred             cHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         42 DLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        42 ~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      .|..|+. .+.+.+++.|..|+..|. ...|..|+ .+.+++++.|+.|++.|. ...|..|+.++++.
T Consensus         4 ~L~~H~~-~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            4 GSSGHEE-TECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCSCCCC-CCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHHhhCc-ccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            4555654 466667777777777763 66667776 666677777777777665 36666777666553

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.1e-09  Score=53.07  Aligned_cols=37  Identities=32%  Similarity=0.678  Sum_probs=17.9

Q ss_pred             cCCCCCeeCCccchhccCcccHHHhhhhcCCCCCcccc
Q psy12258         22 HLGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQC   59 (171)
Q Consensus        22 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   59 (171)
                      |.++++|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHER-IHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGG-GCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHH-HhCCCCCcCC
Confidence            444445555555555555555555544 3444444443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.81  E-value=2.3e-09  Score=52.31  Aligned_cols=34  Identities=29%  Similarity=0.793  Sum_probs=17.5

Q ss_pred             CCCCccCccchhhcCCHHHHHHHHHHhcCCCCcc
Q psy12258         81 GERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHF  114 (171)
Q Consensus        81 ~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~  114 (171)
                      ++++|.|..|++.|.....|..|+++|++++||.
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            3445555555555555555555555555555544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3.3e-09  Score=51.48  Aligned_cols=32  Identities=19%  Similarity=0.333  Sum_probs=25.4

Q ss_pred             hcCCCCccCcc--cccccCCchhHHHHHHHhccC
Q psy12258        107 HTGEKPHFCPV--CNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       107 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +++++||+|+.  |++.|...+.|.+|+++|.+.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56778888875  888888888888888888653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.6e-09  Score=52.21  Aligned_cols=33  Identities=27%  Similarity=0.546  Sum_probs=25.0

Q ss_pred             HhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        106 IHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       106 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +|.++++|.|..|++.|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            466777788888888888888888887777654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.80  E-value=2.6e-09  Score=50.65  Aligned_cols=32  Identities=19%  Similarity=0.418  Sum_probs=24.7

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        107 HTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       107 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      |+++++|.|..|++.|...+.|..|+++|+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            56677888888888888888888888877654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.78  E-value=3e-09  Score=50.51  Aligned_cols=32  Identities=28%  Similarity=0.746  Sum_probs=24.6

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        107 HTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       107 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      |.++++|.|..|++.|...+.|..|+++|.++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            56777888888888888888888888777643

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.76  E-value=2.4e-09  Score=54.86  Aligned_cols=36  Identities=22%  Similarity=0.515  Sum_probs=28.2

Q ss_pred             HhcCCCCccCcccccccCCchhHHHHHH-HhccCccc
Q psy12258        106 IHTGEKPHFCPVCNKMFRVRSDMKRHLN-THNVDARQ  141 (171)
Q Consensus       106 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~  141 (171)
                      +|+++++|.|.+|++.|.....|..|++ +|.++...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            4778899999999999999999999999 78766554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=6.9e-09  Score=56.57  Aligned_cols=36  Identities=31%  Similarity=0.602  Sum_probs=19.1

Q ss_pred             cCCCCccCcc--chhhcCCHHHHHHHH-HHhcCCCCccC
Q psy12258         80 TGERNYQCEF--CHKAFRASSYLQNHR-RIHTGEKPHFC  115 (171)
Q Consensus        80 ~~~~~~~C~~--C~~~~~~~~~l~~H~-~~h~~~~~~~C  115 (171)
                      .+++||+|..  |++.|.....|..|+ ++|++++||.|
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            3455555543  555555555555554 34555555555

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=1.1e-10  Score=67.98  Aligned_cols=58  Identities=17%  Similarity=0.275  Sum_probs=39.2

Q ss_pred             hhhcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258         77 RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus        77 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      ..|+++++|.|+.|++.|.....|..|+++|++++||+|..|.    ....|..|.+.|.+.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccc
Confidence            4566777778888888888888888887777777778776554    344455555554443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.1e-09  Score=51.10  Aligned_cols=34  Identities=24%  Similarity=0.569  Sum_probs=20.5

Q ss_pred             hhcCCCCccCccchhhcCCHHHHHHHHHHhcCCC
Q psy12258         78 IHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEK  111 (171)
Q Consensus        78 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  111 (171)
                      .|.++++|.|..|++.|.....|..|+.+|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            3455566666666666666666666666665554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=9.8e-09  Score=48.94  Aligned_cols=33  Identities=30%  Similarity=0.645  Sum_probs=26.1

Q ss_pred             HhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        106 IHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       106 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      .|.++++|.|.+|++.|...+.|..|+++|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            356778888888888888888888888887653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=6e-09  Score=50.09  Aligned_cols=33  Identities=27%  Similarity=0.514  Sum_probs=27.2

Q ss_pred             HhcCCCCccCcccccccCCc-hhHHHHHHHhccC
Q psy12258        106 IHTGEKPHFCPVCNKMFRVR-SDMKRHLNTHNVD  138 (171)
Q Consensus       106 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  138 (171)
                      +|.+++||.|+.|++.|... +.|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            46778888999999999888 8888998888653

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=7.8e-09  Score=49.30  Aligned_cols=33  Identities=24%  Similarity=0.546  Sum_probs=25.7

Q ss_pred             HhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        106 IHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       106 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      .|.+++||.|..|++.|...+.|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            366778888888888888888888888877643

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.69  E-value=6e-09  Score=50.08  Aligned_cols=35  Identities=34%  Similarity=0.546  Sum_probs=22.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcC
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      |++.|.++++|.|+.|++.|.....|..|++.|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            34556666666666666666666666666666654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.69  E-value=1.3e-08  Score=47.62  Aligned_cols=30  Identities=27%  Similarity=0.442  Sum_probs=13.8

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcCCCCc
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTGEKPH  113 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~  113 (171)
                      ||.|+.|++.|.....|..|+.+|+++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            344444444444444444444444444443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=6.9e-09  Score=49.56  Aligned_cols=32  Identities=31%  Similarity=0.645  Sum_probs=24.9

Q ss_pred             HhcCCCCccCcccccccCCchhHHHHHHHhcc
Q psy12258        106 IHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       106 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      .|.+++||.|.+|++.|...+.|..|+++|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            36677888888888888888888888887764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=1.1e-08  Score=55.77  Aligned_cols=38  Identities=18%  Similarity=0.384  Sum_probs=18.6

Q ss_pred             CCCCCcccccc--hhhhccChHHHHHHH-hhhcCCCCccCc
Q psy12258         51 HSDVKAFQCEY--CGKDFARKYSLVVHR-RIHTGERNYQCE   88 (171)
Q Consensus        51 h~~~~~~~C~~--C~~~~~~~~~l~~h~-~~~~~~~~~~C~   88 (171)
                      .++++||.|..  |++.|.....|..|+ +.|++++|+.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            34445555533  555555555555554 345555555443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.66  E-value=1.6e-08  Score=49.17  Aligned_cols=35  Identities=29%  Similarity=0.452  Sum_probs=18.8

Q ss_pred             CCCCCeeCCccchhccCcccHHHhhhhcCCCCCccc
Q psy12258         23 LGLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQ   58 (171)
Q Consensus        23 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~   58 (171)
                      .++++|.|++|++.|.....|..|++ .|.++++|.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~   36 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMN-VHRRDRARL   36 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHH-TTCCSCTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHH-HcCCCccce
Confidence            34455555555555555555555554 455555543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.66  E-value=1.2e-08  Score=48.30  Aligned_cols=33  Identities=33%  Similarity=0.618  Sum_probs=21.5

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGEK  111 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  111 (171)
                      |.++++|.|..|++.|.....|..|++.|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            445666666666666666666666666666554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=4.1e-09  Score=50.78  Aligned_cols=32  Identities=19%  Similarity=0.406  Sum_probs=25.5

Q ss_pred             HhcCCCCccCcccccccCCchhHHHH-HHHhcc
Q psy12258        106 IHTGEKPHFCPVCNKMFRVRSDMKRH-LNTHNV  137 (171)
Q Consensus       106 ~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  137 (171)
                      +|++++||.|..|++.|...+.|..| ++.|.+
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            46778888888888888888888888 777754

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1e-08  Score=48.94  Aligned_cols=32  Identities=22%  Similarity=0.390  Sum_probs=24.8

Q ss_pred             HhcCCCCccCcccccccCCchhHHHHHHHhcc
Q psy12258        106 IHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       106 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      .|.+++||.|.+|++.|...+.|..|+++|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            35677788888888888888888888877754

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.8e-08  Score=48.07  Aligned_cols=32  Identities=28%  Similarity=0.638  Sum_probs=24.9

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        107 HTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       107 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      |.++++|.|+.|++.|...+.|..|+++|.++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            56677888888888888888888888877643

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.63  E-value=1.5e-08  Score=47.97  Aligned_cols=33  Identities=27%  Similarity=0.640  Sum_probs=20.2

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGEK  111 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  111 (171)
                      |.++++|.|..|++.|.....|..|++.|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            345566666666666666666666666665544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=3.4e-10  Score=65.83  Aligned_cols=56  Identities=18%  Similarity=0.301  Sum_probs=39.3

Q ss_pred             cCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcC
Q psy12258         50 LHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        50 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      .|.++++|.|..|++.|.....|..|++.|+++++|+|..|.    ....|..|.+.|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            467778888888888888888888888888888888886654    33344455555544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=7e-08  Score=52.68  Aligned_cols=35  Identities=23%  Similarity=0.395  Sum_probs=29.9

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhccCccc
Q psy12258        107 HTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDARQ  141 (171)
Q Consensus       107 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  141 (171)
                      +..++||+|..|++.|...+.|.+|+++|......
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~   42 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQ   42 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCccc
Confidence            56688999999999999999999999999876543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.57  E-value=4.6e-08  Score=45.71  Aligned_cols=29  Identities=24%  Similarity=0.541  Sum_probs=26.5

Q ss_pred             CCccCcccccccCCchhHHHHHHHhccCc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNVDA  139 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  139 (171)
                      +||.|++|++.|...+.|..|+++|.++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~   29 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLG   29 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            57999999999999999999999998654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.56  E-value=2.6e-08  Score=44.15  Aligned_cols=27  Identities=44%  Similarity=0.736  Sum_probs=21.4

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhc
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      ++||.|..||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            367888888888888888888887763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.54  E-value=2e-08  Score=44.66  Aligned_cols=26  Identities=27%  Similarity=0.597  Sum_probs=20.7

Q ss_pred             CCCccCcccccccCCchhHHHHHHHh
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~h  135 (171)
                      ++||.|+.||+.|...+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            36788888888888888888888765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=4.4e-08  Score=47.43  Aligned_cols=32  Identities=22%  Similarity=0.318  Sum_probs=22.2

Q ss_pred             hcCCCCccCcc--chhhcCCHHHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEF--CHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +++++||+|+.  |++.|.....|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45667777765  777777777777777777654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.52  E-value=3.2e-08  Score=44.21  Aligned_cols=27  Identities=33%  Similarity=0.767  Sum_probs=21.5

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhc
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      ++||.|+.|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            367888888888888888888887765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.52  E-value=4.6e-08  Score=47.16  Aligned_cols=30  Identities=23%  Similarity=0.634  Sum_probs=15.8

Q ss_pred             cCCCCccCc--ccccccCCchhHHHHHHHhcc
Q psy12258        108 TGEKPHFCP--VCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       108 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      +++++|.|.  .|++.|...+.|.+|+++|.+
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            344555555  355555555555555555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=7.2e-08  Score=43.22  Aligned_cols=28  Identities=43%  Similarity=0.809  Sum_probs=23.1

Q ss_pred             CCccCcccccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4788888888888888888888888754

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.51  E-value=5.7e-08  Score=46.61  Aligned_cols=32  Identities=28%  Similarity=0.631  Sum_probs=24.3

Q ss_pred             hcCCCCccCcc--cccccCCchhHHHHHHHhccC
Q psy12258        107 HTGEKPHFCPV--CNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       107 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      |+++++|.|.+  |++.|...+.|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56677888874  888888888888888877653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.51  E-value=1e-07  Score=43.06  Aligned_cols=28  Identities=25%  Similarity=0.396  Sum_probs=22.8

Q ss_pred             CCccCcccccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      ++|.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccC
Confidence            4688888888888888888888888754

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.51  E-value=8e-08  Score=43.13  Aligned_cols=27  Identities=30%  Similarity=0.751  Sum_probs=21.1

Q ss_pred             CCccCcccccccCCchhHHHHHHHhcc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      +||.|+.|++.|...+.|..|+++|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            367888888888888888888887764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.50  E-value=5.6e-08  Score=43.71  Aligned_cols=28  Identities=25%  Similarity=0.460  Sum_probs=22.5

Q ss_pred             CCccCcccccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +||.|+.|++.|...+.|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4688888888888888888888887643

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=6.6e-08  Score=46.59  Aligned_cols=35  Identities=17%  Similarity=0.371  Sum_probs=32.0

Q ss_pred             hcCCCCccCc--cchhhcCCHHHHHHHHHHhcCCCCc
Q psy12258         79 HTGERNYQCE--FCHKAFRASSYLQNHRRIHTGEKPH  113 (171)
Q Consensus        79 ~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~  113 (171)
                      |+++++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4678999999  5999999999999999999999876

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=6e-08  Score=46.13  Aligned_cols=32  Identities=28%  Similarity=0.583  Sum_probs=20.1

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      |.++++|.|..|++.|.....|..|++.|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            45556666666666666666666666666543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=6.8e-08  Score=45.88  Aligned_cols=32  Identities=34%  Similarity=0.563  Sum_probs=19.1

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      |.++++|.|..|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            44555666666666666666666666665543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.49  E-value=5.8e-08  Score=43.91  Aligned_cols=27  Identities=37%  Similarity=0.709  Sum_probs=20.5

Q ss_pred             CCccCcccccccCCchhHHHHHHHhcc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      +||.|..|++.|.....|..|+++|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            567788888888877778888777664

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=9.7e-08  Score=45.31  Aligned_cols=32  Identities=25%  Similarity=0.673  Sum_probs=20.4

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      |.++++|.|..|++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            44556666666666666666666666666554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.47  E-value=9.6e-09  Score=52.30  Aligned_cols=36  Identities=28%  Similarity=0.472  Sum_probs=28.8

Q ss_pred             HHHHhcCCCCccCc--ccccccCCchhHHHHHHHhccC
Q psy12258        103 HRRIHTGEKPHFCP--VCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       103 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      |...|++++||.|.  .|++.|...+.|..|+++|.++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            44457888889995  6999999999999998888753

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.47  E-value=4.5e-08  Score=46.74  Aligned_cols=23  Identities=22%  Similarity=0.452  Sum_probs=9.7

Q ss_pred             CCCccCcccccccCCchhHHHHH
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHL  132 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~  132 (171)
                      ++||.|+.||++|.+.+.|.+|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            34444444444444444444443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=5.4e-08  Score=46.29  Aligned_cols=32  Identities=19%  Similarity=0.474  Sum_probs=18.9

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      |.++++|.|..|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            44555666666666666666666666655543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.46  E-value=6.3e-08  Score=42.76  Aligned_cols=26  Identities=27%  Similarity=0.585  Sum_probs=20.4

Q ss_pred             CccCcccccccCCchhHHHHHHHhcc
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      ||.|..|++.|...+.|..|+++|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            57888888888888888888887764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.45  E-value=8.5e-08  Score=43.01  Aligned_cols=28  Identities=36%  Similarity=0.714  Sum_probs=21.2

Q ss_pred             CCccCcccccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +||.|+.|++.|.....|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4677888888888888888888777643

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=5.6e-08  Score=46.55  Aligned_cols=32  Identities=31%  Similarity=0.541  Sum_probs=18.0

Q ss_pred             hcCCCCccCccchhhcCCH-HHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEFCHKAFRAS-SYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~-~~l~~H~~~h~~~  110 (171)
                      |.++++|.|+.|++.|... ..|..|+.+|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            4455555555566555555 5555555555443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=2.3e-08  Score=43.94  Aligned_cols=25  Identities=36%  Similarity=0.733  Sum_probs=20.3

Q ss_pred             CCccCcccccccCCchhHHHHHHHh
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h  135 (171)
                      +||.|+.||+.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4688888888888888888888776

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=4.3e-08  Score=47.06  Aligned_cols=32  Identities=22%  Similarity=0.416  Sum_probs=18.5

Q ss_pred             hhcCCCCccCccchhhcCCHHHHHHH-HHHhcC
Q psy12258         78 IHTGERNYQCEFCHKAFRASSYLQNH-RRIHTG  109 (171)
Q Consensus        78 ~~~~~~~~~C~~C~~~~~~~~~l~~H-~~~h~~  109 (171)
                      .|.+++||.|..|++.|.....|..| +..|++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            34555566666666666666666666 555543

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.43  E-value=1.8e-07  Score=43.06  Aligned_cols=29  Identities=31%  Similarity=0.649  Sum_probs=22.6

Q ss_pred             CCCccCc--ccccccCCchhHHHHHHHhccC
Q psy12258        110 EKPHFCP--VCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       110 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      ++||.|.  .|++.|...+.|..|+++|.++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            3678887  7888888888888888887643

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1.4e-07  Score=44.84  Aligned_cols=32  Identities=41%  Similarity=0.809  Sum_probs=20.1

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +.++++|.|+.|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            34556666666666666666666666666554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.42  E-value=9.7e-08  Score=45.54  Aligned_cols=32  Identities=25%  Similarity=0.510  Sum_probs=28.9

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcc
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPV  117 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~  117 (171)
                      ..+++||.|..|++.|.+.+.|..|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            45789999999999999999999997       888864

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.76  E-value=3.7e-08  Score=44.41  Aligned_cols=27  Identities=33%  Similarity=0.635  Sum_probs=20.4

Q ss_pred             CCccCcccccccCCchhHHHHHHHhcc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      +||.|+.|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            367788888888888888888777754

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.38  E-value=1.7e-07  Score=42.84  Aligned_cols=28  Identities=32%  Similarity=0.775  Sum_probs=20.7

Q ss_pred             CCccCc--ccccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCP--VCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +||.|+  .||+.|...+.|..|+++|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            467776  7888888888888887777643

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.73  E-value=4.4e-08  Score=44.42  Aligned_cols=27  Identities=30%  Similarity=0.641  Sum_probs=20.6

Q ss_pred             CCccCcccccccCCchhHHHHHHHhcc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      +||.|..|++.|...+.|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            567788888888888888888777754

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.34  E-value=1.6e-07  Score=47.91  Aligned_cols=32  Identities=25%  Similarity=0.589  Sum_probs=18.8

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHH-HhcCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRR-IHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~  110 (171)
                      |+++++|.|.+|++.|.....|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            445566666666666666666666666 55544

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.29  E-value=2.1e-08  Score=46.58  Aligned_cols=23  Identities=30%  Similarity=0.712  Sum_probs=9.8

Q ss_pred             ccCcccccccCCchhHHHHHHHh
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h  135 (171)
                      |.|..|++.|...+.|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~H   25 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKTA   25 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTSS
T ss_pred             CCCCCCCcccCCHHHHHHHHHHH
Confidence            44444444444444444444433

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.29  E-value=5.7e-07  Score=40.15  Aligned_cols=28  Identities=43%  Similarity=0.834  Sum_probs=19.8

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ++|.|+.|++.|.....|..|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3567777777777777777777777654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.28  E-value=3.7e-07  Score=43.63  Aligned_cols=32  Identities=34%  Similarity=0.618  Sum_probs=19.2

Q ss_pred             hcCCCCccCcc--chhhcCCHHHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEF--CHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ++++++|.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34556666653  666666666666666666554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.28  E-value=3e-07  Score=41.50  Aligned_cols=27  Identities=33%  Similarity=0.588  Sum_probs=20.8

Q ss_pred             CCccCcccccccCCchhHHHH-HHHhcc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRH-LNTHNV  137 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~  137 (171)
                      +||.|+.|++.|...+.|..| +++|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            468888888888888888888 566654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.27  E-value=4.4e-07  Score=40.84  Aligned_cols=28  Identities=25%  Similarity=0.719  Sum_probs=18.9

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ++|.|..|++.|.....|..|++.|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5666777777777777777777666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.24  E-value=9.2e-08  Score=44.27  Aligned_cols=31  Identities=23%  Similarity=0.370  Sum_probs=21.9

Q ss_pred             CCeeCCccchhccCcccHHHhhhhcCCCCCcc
Q psy12258         26 KPYGCEVCGRHFRQWGDLKYHKASLHSDVKAF   57 (171)
Q Consensus        26 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~   57 (171)
                      +||.|++|++.|.....|..|++ .|.++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIK-TAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTT-SSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHH-HHccCCCC
Confidence            35777777777777777777776 57666654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.23  E-value=7.1e-07  Score=40.09  Aligned_cols=28  Identities=29%  Similarity=0.612  Sum_probs=19.5

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcCCC
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTGEK  111 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~  111 (171)
                      +|.|..|++.|.....|..|+..|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5677777777777777777777766554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.23  E-value=4.3e-07  Score=40.60  Aligned_cols=27  Identities=30%  Similarity=0.540  Sum_probs=17.1

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +|.|+.|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.23  E-value=5.5e-07  Score=40.17  Aligned_cols=27  Identities=44%  Similarity=0.818  Sum_probs=18.4

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +|.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            566777777777777777777666654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.23  E-value=5.9e-08  Score=49.29  Aligned_cols=34  Identities=18%  Similarity=0.464  Sum_probs=18.6

Q ss_pred             hhhcCCCCccCc--cchhhcCCHHHHHHHHHHhcCC
Q psy12258         77 RIHTGERNYQCE--FCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        77 ~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ..|.++++|.|.  .|++.|.....|..|+++|+++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            345555555553  4555555555555555555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=5.6e-07  Score=40.10  Aligned_cols=28  Identities=29%  Similarity=0.689  Sum_probs=19.6

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ++|.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3567777777777777777777776654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.20  E-value=5.4e-07  Score=40.24  Aligned_cols=26  Identities=27%  Similarity=0.570  Sum_probs=21.0

Q ss_pred             CCccCc--ccccccCCchhHHHHHHHhc
Q psy12258        111 KPHFCP--VCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       111 ~~~~C~--~C~~~f~~~~~l~~H~~~h~  136 (171)
                      ++|.|.  .|++.|...+.|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            467888  88888888888888888775

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.18  E-value=7.6e-07  Score=39.15  Aligned_cols=25  Identities=28%  Similarity=0.646  Sum_probs=18.1

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHh
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h  107 (171)
                      ++|.|..|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            5677777777777777777777665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.17  E-value=1.3e-06  Score=40.08  Aligned_cols=28  Identities=36%  Similarity=0.702  Sum_probs=19.9

Q ss_pred             CCccCc--cchhhcCCHHHHHHHHHHhcCC
Q psy12258         83 RNYQCE--FCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        83 ~~~~C~--~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ++|.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567776  6777777777777777777654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.16  E-value=7.3e-07  Score=39.52  Aligned_cols=26  Identities=38%  Similarity=0.841  Sum_probs=17.4

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhc
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      ++|.|..|++.|.....|..|++.|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            46667777777777777777766554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.16  E-value=1.2e-06  Score=39.92  Aligned_cols=28  Identities=50%  Similarity=0.973  Sum_probs=19.6

Q ss_pred             CCccCc--cchhhcCCHHHHHHHHHHhcCC
Q psy12258         83 RNYQCE--FCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        83 ~~~~C~--~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356776  6777777777777777777654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.6e-07  Score=41.46  Aligned_cols=27  Identities=52%  Similarity=0.784  Sum_probs=18.8

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +|.|..|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            567777777777777777777766554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.15  E-value=5.9e-07  Score=39.60  Aligned_cols=25  Identities=28%  Similarity=0.603  Sum_probs=16.9

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHh
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h  107 (171)
                      +||.|..|++.|...+.|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5666777777777777777776654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.13  E-value=1.8e-06  Score=47.06  Aligned_cols=32  Identities=22%  Similarity=0.392  Sum_probs=22.9

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +..++||.|..|++.|.....|..|+++|+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            44567777777777777777777777777664

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.40  E-value=3.4e-07  Score=41.29  Aligned_cols=28  Identities=46%  Similarity=0.893  Sum_probs=19.4

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ++|.|..|++.|.....|..|++.|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4667777777777777777777766553

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.07  E-value=1.5e-06  Score=38.07  Aligned_cols=26  Identities=35%  Similarity=0.882  Sum_probs=16.4

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcC
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      +|.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35666666666666666666666554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.26  E-value=7.8e-07  Score=38.71  Aligned_cols=25  Identities=52%  Similarity=0.798  Sum_probs=17.0

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHh
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h  107 (171)
                      +||.|+.|++.|.....|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3567777777777777777776655

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.00  E-value=2e-06  Score=38.66  Aligned_cols=27  Identities=37%  Similarity=0.936  Sum_probs=17.0

Q ss_pred             CccCccchhhcCCHHHHHHH-HHHhcCC
Q psy12258         84 NYQCEFCHKAFRASSYLQNH-RRIHTGE  110 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H-~~~h~~~  110 (171)
                      +|.|..|++.|.....|..| +.+|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4555543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.99  E-value=1e-05  Score=43.75  Aligned_cols=47  Identities=21%  Similarity=0.363  Sum_probs=34.9

Q ss_pred             chhhcCCHHHHHHHHH-HhcCCC------CccCc--ccccccCCchhHHHHHHHhc
Q psy12258         90 CHKAFRASSYLQNHRR-IHTGEK------PHFCP--VCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus        90 C~~~~~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h~  136 (171)
                      |++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|+++.|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            7777888888888874 565443      68885  78888888888888888754

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.88  E-value=1.8e-05  Score=42.77  Aligned_cols=45  Identities=22%  Similarity=0.257  Sum_probs=23.8

Q ss_pred             ccccccCChhhHHHHHH-HcCCCC------CeeCC--ccchhccCcccHHHhhh
Q psy12258          4 TCGKSFFSSTALKVHNR-VHLGLK------PYGCE--VCGRHFRQWGDLKYHKA   48 (171)
Q Consensus         4 ~C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~   48 (171)
                      .|++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            45666666666666653 454443      45553  45555555555555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.75  E-value=1e-05  Score=35.82  Aligned_cols=25  Identities=36%  Similarity=0.802  Sum_probs=15.7

Q ss_pred             CccCc--cchhhcCCHHHHHHHHHHhc
Q psy12258         84 NYQCE--FCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        84 ~~~C~--~C~~~~~~~~~l~~H~~~h~  108 (171)
                      +|.|.  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45666  66666666666666666554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.33  E-value=0.00011  Score=47.73  Aligned_cols=103  Identities=16%  Similarity=0.169  Sum_probs=68.5

Q ss_pred             eCCccchhccCccc-----HHHhhhhcCCCCCcccc--cchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHH
Q psy12258         29 GCEVCGRHFRQWGD-----LKYHKASLHSDVKAFQC--EYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQ  101 (171)
Q Consensus        29 ~C~~C~~~f~~~~~-----l~~H~~~~h~~~~~~~C--~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~  101 (171)
                      .|+.|...+.....     +..-+.     .....|  ..|+.... ...+..|... =.-.+..|+.|+..+ ....|.
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~-----~l~v~C~n~GC~~~~~-~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~  126 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL-----SLMVKCPNEGCLHKME-LRHLEDHQAH-CEFALMDCPQCQRPF-QKFHIN  126 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH-----TSEEECCSTTCCCEEE-GGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh-----hcccCCCCCCCCceec-HhHHHHHHhc-CCceeeECCCCChHH-HHHHHH
Confidence            89999887665311     111111     233556  35776555 3467777632 233567899999877 666788


Q ss_pred             HHHHHhcCCCCccCcccccccCCchhHHHHHHHhccCcc
Q psy12258        102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVDAR  140 (171)
Q Consensus       102 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  140 (171)
                      .|....-..++..|+.|+..+. ...|..|..++.+...
T Consensus       127 ~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          127 IHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALE  164 (170)
T ss_dssp             HHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC---
T ss_pred             HHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhh
Confidence            9998888888899999998774 5678999887776543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.04  E-value=9.6e-05  Score=45.03  Aligned_cols=30  Identities=23%  Similarity=0.473  Sum_probs=24.9

Q ss_pred             HHhcCCCCccCcccccccCCchhHHHHHHH
Q psy12258        105 RIHTGEKPHFCPVCNKMFRVRSDMKRHLNT  134 (171)
Q Consensus       105 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  134 (171)
                      ..|+++++|.|..|++.|.+.+.|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            457778889999999999999999999854

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.76  E-value=0.0018  Score=31.94  Aligned_cols=27  Identities=30%  Similarity=0.619  Sum_probs=17.8

Q ss_pred             CCccCcccccccCCchhHHHHHHHhcc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      ..|.|+.|+..|.....|+.||+.--+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            456777777777777777777764433

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.56  E-value=0.0022  Score=39.51  Aligned_cols=76  Identities=24%  Similarity=0.430  Sum_probs=48.7

Q ss_pred             CCcccccchhhhccChHHHHHHH--hhhcCC-CCccCc------cchhhcCCHHHHHHHHHHhcCCCCccCcccccccCC
Q psy12258         54 VKAFQCEYCGKDFARKYSLVVHR--RIHTGE-RNYQCE------FCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRV  124 (171)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~l~~h~--~~~~~~-~~~~C~------~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  124 (171)
                      .+++.|..|+..|.+...+..|.  +.|... +.+.+.      .-+..+....    +...+.+...|.|..|++.|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            35688999999999999999997  344211 111110      0011111111    1123455678999999999999


Q ss_pred             chhHHHHHH
Q psy12258        125 RSDMKRHLN  133 (171)
Q Consensus       125 ~~~l~~H~~  133 (171)
                      ...|..|+.
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999983

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.29  E-value=0.0011  Score=42.86  Aligned_cols=83  Identities=20%  Similarity=0.394  Sum_probs=58.3

Q ss_pred             CCeeC--CccchhccCcccHHHhhhhcCCCCCcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHH
Q psy12258         26 KPYGC--EVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNH  103 (171)
Q Consensus        26 ~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H  103 (171)
                      ....|  ..|+..+. ...+..|..  .-...+..|+.|+..+ ....|..|....-..+...|+.|+..+. ...+..|
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~--~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H  155 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQA--HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIH  155 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHT--TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHh--cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhH
Confidence            45677  46777654 456777864  2334567899999887 4567889987776778889999998774 4577899


Q ss_pred             HHHhcCCCCc
Q psy12258        104 RRIHTGEKPH  113 (171)
Q Consensus       104 ~~~h~~~~~~  113 (171)
                      ..++.++.++
T Consensus       156 ~~~~~~~~~~  165 (170)
T 3hcs_A          156 DQNCPLALEH  165 (170)
T ss_dssp             HTTCCC----
T ss_pred             HHhCcChhhh
Confidence            9888776543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.91  E-value=0.001  Score=40.55  Aligned_cols=27  Identities=30%  Similarity=0.315  Sum_probs=15.1

Q ss_pred             cCCCCCeeCCccchhccCcccHHHhhh
Q psy12258         22 HLGLKPYGCEVCGRHFRQWGDLKYHKA   48 (171)
Q Consensus        22 h~~~~~~~C~~C~~~f~~~~~l~~H~~   48 (171)
                      ++++++|.|..|++.|.+...|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            444555555555555555555555544

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.91  E-value=0.0071  Score=37.17  Aligned_cols=77  Identities=18%  Similarity=0.298  Sum_probs=48.9

Q ss_pred             CCCeeCCccchhccCcccHHHhhhh-cCCC-CCcccccc------hhhhccChHHHHHHHhhhcCCCCccCccchhhcCC
Q psy12258         25 LKPYGCEVCGRHFRQWGDLKYHKAS-LHSD-VKAFQCEY------CGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRA   96 (171)
Q Consensus        25 ~~~~~C~~C~~~f~~~~~l~~H~~~-~h~~-~~~~~C~~------C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~   96 (171)
                      .+++.|.+|...|.+...+..|... .|.. .+.+.+..      -+..+...    .+.....+...|-|.+|+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEeCC
Confidence            3678999999999999999999842 2321 11222210      01111110    01123345667899999999999


Q ss_pred             HHHHHHHHH
Q psy12258         97 SSYLQNHRR  105 (171)
Q Consensus        97 ~~~l~~H~~  105 (171)
                      ...+..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999975

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.57  E-value=0.0091  Score=27.48  Aligned_cols=27  Identities=19%  Similarity=0.449  Sum_probs=20.8

Q ss_pred             CccCcccccccCCchhHHHHHHHhccC
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      .|.||.|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            377888888888888888888765543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.47  E-value=0.014  Score=28.78  Aligned_cols=24  Identities=25%  Similarity=0.470  Sum_probs=17.8

Q ss_pred             CCccCccchhhcCCHHHHHHHHHH
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRI  106 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~  106 (171)
                      -.|.|+.|+..|.....|+.|+..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            456777788788777788777763

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.07  E-value=0.01  Score=27.32  Aligned_cols=27  Identities=19%  Similarity=0.384  Sum_probs=21.5

Q ss_pred             CeeCCccchhccCcccHHHhhhhcCCC
Q psy12258         27 PYGCEVCGRHFRQWGDLKYHKASLHSD   53 (171)
Q Consensus        27 ~~~C~~C~~~f~~~~~l~~H~~~~h~~   53 (171)
                      .|.|++|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            488888888888888888888776653

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.31  E-value=0.16  Score=23.47  Aligned_cols=24  Identities=17%  Similarity=0.416  Sum_probs=17.9

Q ss_pred             CCCccCcccccccCCchhHHHHHH
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      ...+.|..|+.+|.+...+..|.+
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhe
Confidence            345678888888888888888765

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.55  E-value=0.094  Score=28.96  Aligned_cols=31  Identities=13%  Similarity=0.360  Sum_probs=22.9

Q ss_pred             CCccCcccccccC-------CchhHHHHHHHhccCccc
Q psy12258        111 KPHFCPVCNKMFR-------VRSDMKRHLNTHNVDARQ  141 (171)
Q Consensus       111 ~~~~C~~C~~~f~-------~~~~l~~H~~~h~~~~~~  141 (171)
                      ....|..|++.+.       ..+.|.+|++..|.+.-.
T Consensus        27 ~~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~   64 (76)
T 2djr_A           27 QYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELE   64 (76)
T ss_dssp             SCEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHH
T ss_pred             CEEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHHHH
Confidence            3467888888876       356899999888866543

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.48  E-value=0.21  Score=22.23  Aligned_cols=25  Identities=16%  Similarity=0.510  Sum_probs=19.8

Q ss_pred             ccCcccccccCCchhHHHHHHHhcc
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      -.|..|.+.+....+|.+|+|..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3588888999888899999876553

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=88.67  E-value=0.018  Score=31.83  Aligned_cols=12  Identities=42%  Similarity=0.932  Sum_probs=9.9

Q ss_pred             CccCcccccccC
Q psy12258        112 PHFCPVCNKMFR  123 (171)
Q Consensus       112 ~~~C~~C~~~f~  123 (171)
                      .|+||.||--|.
T Consensus        51 ~FkCP~CgEEFy   62 (95)
T 2k5c_A           51 VFKCPVCGEEFY   62 (95)
T ss_dssp             EEECTTTCCEEE
T ss_pred             hhcCCCccHHHh
Confidence            489999998875

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=88.62  E-value=0.24  Score=27.99  Aligned_cols=22  Identities=41%  Similarity=0.827  Sum_probs=15.6

Q ss_pred             CccCcccccccCCchhHHHHHHHhc
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      ...|-+||+.|.   .|.+|++.+|
T Consensus        21 ~iiClecGK~fK---~LkRHL~~~h   42 (87)
T 2jsp_A           21 HIVCLECGGSFK---SLKRHLTTHH   42 (87)
T ss_dssp             CEECTBTCCEES---BHHHHHHHTT
T ss_pred             ceEecccchhhH---HHHHHHHHcc
Confidence            356888888777   4668887754

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.10  E-value=0.53  Score=21.70  Aligned_cols=24  Identities=17%  Similarity=0.373  Sum_probs=14.6

Q ss_pred             CccCccchhhcCCHHHHHHHHHHh
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h  107 (171)
                      .+.|..|+-.|.....+..|....
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHHHT
T ss_pred             cCeeccccceehhhHHHhhhheec
Confidence            455666666666666666665543

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=87.00  E-value=0.21  Score=29.22  Aligned_cols=28  Identities=29%  Similarity=0.630  Sum_probs=17.0

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccc
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM  121 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~  121 (171)
                      .+++|..||..|.           ..-.+|-+|+.|+..
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe   93 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSE   93 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCC
Confidence            4677777777771           122456677777644

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=86.54  E-value=0.38  Score=20.93  Aligned_cols=20  Identities=20%  Similarity=0.383  Sum_probs=14.3

Q ss_pred             CCCccccccCChhhHHHHHH
Q psy12258          1 MCDTCGKSFFSSTALKVHNR   20 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~   20 (171)
                      +|++|.....+...|..|.+
T Consensus         5 ~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            5 CCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             ECTTSSCEESSHHHHHHHHH
T ss_pred             cCccccccCcChHHHHHHHH
Confidence            37777777777777777754

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=86.20  E-value=0.34  Score=22.91  Aligned_cols=25  Identities=32%  Similarity=0.606  Sum_probs=17.3

Q ss_pred             CCCccCcccccccCCchhHHHHHHHh
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~h  135 (171)
                      ...+.|+.||+.+.. ..+..|..-|
T Consensus         7 ~~~~~C~~C~~~i~~-~~~~EH~D~H   31 (39)
T 2i5o_A            7 EDQVPCEKCGSLVPV-WDMPEHMDYH   31 (39)
T ss_dssp             CCEEECTTTCCEEEG-GGHHHHHHHH
T ss_pred             CCCcccccccCcCCc-ccccchhhHH
Confidence            345778888888776 5567776555

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=85.51  E-value=0.53  Score=31.25  Aligned_cols=26  Identities=23%  Similarity=0.427  Sum_probs=22.3

Q ss_pred             CCCccCcccccccCC-chhHHHHHHHh
Q psy12258        110 EKPHFCPVCNKMFRV-RSDMKRHLNTH  135 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~-~~~l~~H~~~h  135 (171)
                      ..|.+|..|+..|.+ -..|..|+..|
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHH
Confidence            467899999999986 88999998765

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=84.70  E-value=0.48  Score=23.99  Aligned_cols=21  Identities=19%  Similarity=0.570  Sum_probs=18.7

Q ss_pred             ccCcccccccCCchhHHHHHH
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      -.|..|+..|..+-.|+.|+.
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            589999999999999999983

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=84.38  E-value=0.22  Score=33.07  Aligned_cols=26  Identities=27%  Similarity=0.673  Sum_probs=19.5

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccc
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM  121 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~  121 (171)
                      ..|.|+.||..+.             +..|+.||+||..
T Consensus       170 ~~~~C~~CG~i~~-------------g~~p~~CP~C~~~  195 (202)
T 1yuz_A          170 KFHLCPICGYIHK-------------GEDFEKCPICFRP  195 (202)
T ss_dssp             CEEECSSSCCEEE-------------SSCCSBCTTTCCB
T ss_pred             cEEEECCCCCEEc-------------CcCCCCCCCCCCC
Confidence            4689999997764             2467899999853

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=83.93  E-value=0.35  Score=26.73  Aligned_cols=39  Identities=23%  Similarity=0.444  Sum_probs=15.7

Q ss_pred             cccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcC
Q psy12258         56 AFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFR   95 (171)
Q Consensus        56 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~   95 (171)
                      .|.|..|+.++.-. .+..|+..-.+...|.|..|+..|.
T Consensus        10 ~F~C~~Cgd~lKK~-kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           10 FFTCNACGESVKKI-QVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEEESSSCCEEETT-HHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEEcCCCCCeeecc-cchhHHhhCCCCCcEEecccCCeeC
Confidence            34444444443322 3344433322223344444444443

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=83.43  E-value=1.3  Score=22.42  Aligned_cols=47  Identities=30%  Similarity=0.504  Sum_probs=26.0

Q ss_pred             eeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhc-cChHHHHHHHhh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDF-ARKYSLVVHRRI   78 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~-~~~~~l~~h~~~   78 (171)
                      ..|++|..-......|..|...--.+    +|++|-... .+.+.|+.|.+.
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~g----qCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCING----QCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTTT----BCTTTCCBCCSSHHHHHHHHTT
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCCC----CCCcccCcCCcCHHHHHHHHHH
Confidence            35666666666666777776643222    455554332 334666666553

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=81.94  E-value=0.29  Score=24.10  Aligned_cols=6  Identities=67%  Similarity=1.863  Sum_probs=2.3

Q ss_pred             cCcccc
Q psy12258        114 FCPVCN  119 (171)
Q Consensus       114 ~C~~C~  119 (171)
                      .|++||
T Consensus        32 ~CP~Cg   37 (46)
T 6rxn_A           32 CCPVCG   37 (46)
T ss_dssp             BCTTTC
T ss_pred             cCcCCC
Confidence            333333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	171
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-11
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	7e-10
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-10
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-09
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-08
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	5e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-08
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-07
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	8e-07
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.003
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	2e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	5e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	7e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	7e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	6e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	2e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	4e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-04
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	0.002

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (128), Expect = 4e-11
 Identities = 19/33 (57%), Positives = 23/33 (69%)

Query: 78  IHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
           IH+GE+ Y C  C KAF  SS L  H+R+HTGE
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (107), Expect = 4e-08
 Identities = 17/32 (53%), Positives = 21/32 (65%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGE 82
          HS  K + C  CGK F+R   LV H+R+HTGE
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (101), Expect = 4e-07
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 106 IHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           IH+GEKP+ C  C K F   S + +H   H
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (119), Expect = 7e-10
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
                   R Y+C+ C K+F  SS L  HRR HTGE
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (94), Expect = 3e-06
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
                   + + C  C K F   SD+ +H  TH
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 2e-05
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGE 82
            + + ++C+ CGK F+    L  HRR HTGE
Sbjct: 7  QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (75), Expect = 0.001
 Identities = 8/30 (26%), Positives = 12/30 (40%)

Query: 18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHK 47
                  + Y C+ CG+ F    DL  H+
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHR 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (118), Expect = 9e-10
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 77  RIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGEK 111
           R HTGE+ Y C  C K FR    L  H + +    
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (103), Expect = 2e-07
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 105 RIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHN 136
           R HTGEKP+ C  C+K FR +  +  H   ++
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 5e-06
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGE 82
          H+  K + C +C K F +K  L +H + +   
Sbjct: 3  HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 4e-04
 Identities = 13/28 (46%), Positives = 14/28 (50%)

Query: 20 RVHLGLKPYGCEVCGRHFRQWGDLKYHK 47
          R H G KPY C  C + FRQ   L  H 
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHF 28

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (116), Expect = 2e-09
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 80  TGERNYQCEFCHKAFRASSYLQNH-RRIHTGEKPHFCPV 117
           +  + Y C+ C K F    +L  H +++HT E+PH C V
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (113), Expect = 7e-09
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 55 KAFQCEYCGKDFARKYSLVVH-RRIHTGERNYQCE 88
          K + C+ CGK F+R   L  H +++HT ER ++C+
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 1e-05
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 26 KPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCE 60
          KPY C+ CG+ F +   L  H   +H+  +  +C+
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 2e-05
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 1  MCDTCGKSFFSSTALKVHNR-VHLGLKPYGCEV 32
          +C +CGK F     L  H + VH   +P+ C+V
Sbjct: 7  ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (112), Expect = 7e-09
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 77  RIHTGERNYQCEFCHKAFRASSYLQNH-RRIHTGE 110
           R H+GE+ Y+C  CH  F  S  ++ H  + HT  
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (99), Expect = 6e-07
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 105 RIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           R H+GEKP+ C +C+  F     MK H+   
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 6e-06
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 20 RVHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSD 53
          R H G KPY C +C   F Q G +K H    H++
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 8e-05
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVH-RRIHTGE 82
          HS  K ++C  C   F +  ++ +H  + HT  
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.6 bits (111), Expect = 1e-08
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 75  HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTG 109
             R  TG + +QC  C ++F  S +L  HR+ H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.8 bits (101), Expect = 3e-07
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
             R  TG KP  CP C++ F     +  H   H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 4e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 18 HNRVHLGLKPYGCEVCGRHFRQWGDLKYHK 47
            R   G+KP+ C  C R F +   L  H+
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.9 bits (78), Expect = 5e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTG 81
           + +K FQC  C + F+R   L +HR+ H  
Sbjct: 6  STGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 1e-08
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 55  KAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIH 107
           K + C+ CGK F  K     H  +H G R Y C  C K F+   +L  H +IH
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 1e-07
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
           ++ Y C+ C K+F   S    H  +H G +P+ C VC K F+++  +  H+  H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 3e-04
 Identities = 20/43 (46%), Positives = 25/43 (58%)

Query: 5  CGKSFFSSTALKVHNRVHLGLKPYGCEVCGRHFRQWGDLKYHK 47
          CGKSF   +    H  +HLGL+PYGC VCG+ F+    L  H 
Sbjct: 8  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 2e-08
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 56 AFQCEY--CGKDFARKYSLVVHRRIHTGERNYQCEF 89
          +F C    CGK F  K  L  H ++H+  R+Y CEF
Sbjct: 1  SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (100), Expect = 3e-07
 Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 84  NYQCE--FCHKAFRASSYLQNHRRIHTGEKPHFC 115
           ++ C    C K+F    +L+ H ++H+  + + C
Sbjct: 1   SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 4e-05
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 2  CDTCGKSFFSSTALKVHNRVHLGLKPYGCE 31
             CGKSF     LK H ++H   + Y CE
Sbjct: 6  EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 43.4 bits (103), Expect = 2e-07
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 83  RNYQCEFCHKAFRASSYLQNHRRIHTGEK 111
           R++ CE C +AF    +L+ H R HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 43.0 bits (102), Expect = 2e-07
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGER 83
          ++F CE C + FAR+  L  H R HT E+
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (98), Expect = 7e-07
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 79  HTGERNYQCEFCHKAFRASSYLQNHRRIHTGE 110
            +G+R + C  C  AF   +    H ++HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (89), Expect = 2e-05
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 51 HSDVKAFQCEYCGKDFARKYSLVVHRRIHTGERN 84
           S  + F C  C   F  K +   H ++HT   +
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 35

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 107 HTGEKPHFCPVCNKMFRVRSDMKRHLNTH 135
            +G++P  C +C   F  +++  RHL  H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 8e-07
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTGER 83
          K F C  C K F R   L  H + H  ++
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 2e-06
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 85  YQCEFCHKAFRASSYLQNHRRIHTGEK 111
           + C  C K F  S +L  H + H  +K
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.1 bits (97), Expect = 1e-06
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 82  ERNYQCEFCHKAFRASSYLQNHRRIHTG 109
           ++ +QC  C + F  S +L  H R HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.9 bits (94), Expect = 3e-06
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHTG 81
          K FQC  C ++F+R   L  H R HTG
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.8 bits (73), Expect = 0.003
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 110 EKPHFCPVCNKMFRVRSDMKRHLNTH 135
           +KP  C +C + F     +  H+ TH
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.7 bits (95), Expect = 2e-06
 Identities = 6/39 (15%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 75  HRRIHTGERNYQCEFC--HKAFRASSYLQNHRRIHTGEK 111
                  ++ ++C F    K F+    +++H + H  ++
Sbjct: 9   KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 1e-05
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHTGER 83
          + F C +  CGK F R   L  H+R HTGE+
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 1e-05
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 83  RNYQC--EFCHKAFRASSYLQNHRRIHTGEK 111
           R + C   +C K F  S  LQ H+R HTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 2e-05
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHTGE 82
          K  +C +  C K ++R  +L  H R HTGE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 4e-05
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 83  RNYQC--EFCHKAFRASSYLQNHRRIHTGE 110
           + ++C  E C K++     L+ H R HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (85), Expect = 5e-05
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 55 KAFQCEYCGKDFARKYSLVVHRRIHT 80
          K ++C  CGK F++   L+ H+RIHT
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (84), Expect = 7e-05
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 85  YQCEFCHKAFRASSYLQNHRRIHT 108
           Y+C  C KAF  +S L NH+RIHT
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIHT 26

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.2 bits (84), Expect = 7e-05
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 82  ERNYQCEF--CHKAFRASSYLQNHRRIHTGE 110
           +R Y C+   C KAF  +  L  H++ H  +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (78), Expect = 6e-04
 Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHTGE 82
          + + C++  C K F R + L+ H++ H  +
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 2e-04
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHTGE 82
          K FQC +  CGK F+  ++L  H RIHTG+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 4e-04
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 83  RNYQCEF--CHKAFRASSYLQNHRRIHTGE 110
           + +QC F  C K F     L+ H RIHTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.6 bits (80), Expect = 2e-04
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 83  RNYQCEF--CHKAFRASSYLQNHRRIHTG 109
           R Y C    C + F  S+ L  H RIHTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.6 bits (80), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 55 KAFQCEY--CGKDFARKYSLVVHRRIHTG 81
          + + C    C + F+R   L  H RIHTG
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (74), Expect = 0.002
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 83  RNYQCEFCHKAFRASSYLQNHRRIHTGEKPH 113
           +   CE C K FR   +L  H+  H+GEKP+
Sbjct: 4   KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	171
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.73
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.59
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.36
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.35
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.35
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.32
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.29
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.29
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.29
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.26
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.22
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.19
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.15
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.12
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.12
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.1
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.05
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.02
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.01
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.98
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.98
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.95
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.94
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.94
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.89
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.85
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.81
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.81
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.76
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.73
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.72
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.69
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.68
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.64
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.6
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.58
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.47
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.41
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.4
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.36
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.32
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.3
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.29
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.23
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.22
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.15
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.11
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.05
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.02
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.01
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.0
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.98
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.94
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.92
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.84
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.83
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.8
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.73
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.72
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.7
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.69
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.59
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.58
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.54
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.53
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.49
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.46
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.4
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.36
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.32
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.27
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.24
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.21
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.16
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.12
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.05
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.04
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.99
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.94
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.93
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.68
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.55
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.55
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.5
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.46
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.45
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.33
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	96.27
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.26
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.13
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.99
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.87
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.5
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.46
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.29
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.27
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.79
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.69
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.64
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.61
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.49
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.19
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.01
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.87
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.61
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.6
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.77
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.12
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.09
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.64
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	90.58
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	89.29
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.57
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	88.15
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	88.14
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	85.32
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.46
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	83.74
d1fu9a_	36	U-shaped transcription factor, different fingers {	82.18

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=8.3e-19  Score=91.47  Aligned_cols=53  Identities=32%  Similarity=0.712  Sum_probs=50.0

Q ss_pred             CCCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccccCCchhHHHHHHHh
Q psy12258         82 ERNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus        82 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  135 (171)
                      ++||.| .||+.|.....|..|+++|++++||.|++||++|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            589999 49999999999999999999999999999999999999999999876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3e-16  Score=81.56  Aligned_cols=52  Identities=38%  Similarity=0.751  Sum_probs=28.8

Q ss_pred             CcccccchhhhccChHHHHHHHhhhcCCCCccCccchhhcCCHHHHHHHHHHh
Q psy12258         55 KAFQCEYCGKDFARKYSLVVHRRIHTGERNYQCEFCHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        55 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h  107 (171)
                      ++|.| .|++.|.....|..|++.|++++||.|..|++.|...+.|..|+++|
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            45555 25555555555555555555555555555555555555555555443

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.4e-13  Score=62.97  Aligned_cols=33  Identities=39%  Similarity=0.642  Sum_probs=28.5

Q ss_pred             HhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        106 IHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       106 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +|++++||+|.+||++|...+.|..|+++|.++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            478899999999999999999999999988764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.8e-13  Score=64.33  Aligned_cols=34  Identities=38%  Similarity=0.686  Sum_probs=29.8

Q ss_pred             HHhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        105 RIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       105 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      ++|++++||+|.+||++|...+.|..|+++|+.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4688999999999999999999999999998764

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=8e-14  Score=66.44  Aligned_cols=37  Identities=24%  Similarity=0.416  Sum_probs=29.6

Q ss_pred             HHHHHhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        102 NHRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       102 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +|+.+|++++||.|++||++|...+.|..|+++|.++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3667788888888888888888888888888888753

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=1.8e-13  Score=64.71  Aligned_cols=34  Identities=32%  Similarity=0.581  Sum_probs=29.7

Q ss_pred             HHHHhcCCCCccCcccccccCCchhHHHHHHHhc
Q psy12258        103 HRRIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       103 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      |.++|++++||+|++|+++|.+++.|.+|+++|-
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            5678899999999999999999999999988875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=7e-13  Score=63.02  Aligned_cols=36  Identities=31%  Similarity=0.695  Sum_probs=27.5

Q ss_pred             CCCeeCCccchhccCcccHHHhhhhcCCCCCccccc
Q psy12258         25 LKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCE   60 (171)
Q Consensus        25 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   60 (171)
                      ++||.|++||+.|....+|..|++.+|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            577778888888888778888776567777777775

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=7e-13  Score=61.44  Aligned_cols=32  Identities=28%  Similarity=0.746  Sum_probs=27.6

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        107 HTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       107 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      |++++||+|.+|++.|.+.+.|.+|+++|...
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            67889999999999999999999999888754

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=7.9e-13  Score=62.83  Aligned_cols=36  Identities=39%  Similarity=0.839  Sum_probs=28.6

Q ss_pred             CCCccCccchhhcCCHHHHHHHHH-HhcCCCCccCcc
Q psy12258         82 ERNYQCEFCHKAFRASSYLQNHRR-IHTGEKPHFCPV  117 (171)
Q Consensus        82 ~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~~~~~C~~  117 (171)
                      ++||+|..||+.|...+.|..|++ +|++++||+|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            578888888888888888888875 688888888863

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1e-12  Score=61.59  Aligned_cols=34  Identities=35%  Similarity=0.688  Sum_probs=28.7

Q ss_pred             HHhcCCCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        105 RIHTGEKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       105 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      ++|++++||+|+.|+++|...++|.+|++.+|.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3688999999999999999999999998766644

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=2.3e-12  Score=56.48  Aligned_cols=28  Identities=29%  Similarity=0.671  Sum_probs=23.5

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhcc
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      ++||+|++|++.|...+.|..|+++|.+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788888888888888888888888864

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1.3e-12  Score=62.14  Aligned_cols=36  Identities=44%  Similarity=0.763  Sum_probs=24.3

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      |+..|++++||.|.+||+.|...+.|..|+++|+++
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            556666667777777777777777777777666654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=7e-12  Score=53.55  Aligned_cols=26  Identities=35%  Similarity=0.597  Sum_probs=22.8

Q ss_pred             CCccCcccccccCCchhHHHHHHHhc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      +||+|.+||+.|...+.|..|+|+|.
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999998874

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.3e-11  Score=56.26  Aligned_cols=32  Identities=56%  Similarity=0.987  Sum_probs=20.8

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      |++++||+|.+|++.|.+.+.|..|+++|+++
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            55666666666666666666666666666653

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.12  E-value=1.4e-11  Score=54.59  Aligned_cols=28  Identities=29%  Similarity=0.756  Sum_probs=20.3

Q ss_pred             CCccCcccccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +||.|++||++|...+.|.+|+++|.++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4677777777777777777777777654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2.7e-11  Score=53.55  Aligned_cols=28  Identities=32%  Similarity=0.669  Sum_probs=21.4

Q ss_pred             CCccCcccccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +||.|++||++|.+.+.|.+|+++|.++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4777888888888888888888877654

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.8e-11  Score=56.63  Aligned_cols=33  Identities=36%  Similarity=0.702  Sum_probs=22.3

Q ss_pred             hhcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         78 IHTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        78 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      .|++++||+|.+|++.|.+.+.|..|+++|+++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            466667777777777777777777777666554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=2.7e-11  Score=57.07  Aligned_cols=34  Identities=35%  Similarity=0.605  Sum_probs=21.9

Q ss_pred             HHhhhcCCCCccCccchhhcCCHHHHHHHHHHhc
Q psy12258         75 HRRIHTGERNYQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        75 h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      |.+.|++++||+|..|++.|.+.+.|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            3456666666666666666666666666666653

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=2.5e-11  Score=56.68  Aligned_cols=33  Identities=39%  Similarity=0.779  Sum_probs=23.5

Q ss_pred             HcCCCCCeeCCccchhccCcccHHHhhhhcCCC
Q psy12258         21 VHLGLKPYGCEVCGRHFRQWGDLKYHKASLHSD   53 (171)
Q Consensus        21 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~   53 (171)
                      +|++++||.|++|++.|....+|..|++..|.+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            567777777777777777777777776655543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=5.3e-11  Score=54.95  Aligned_cols=32  Identities=28%  Similarity=0.681  Sum_probs=24.2

Q ss_pred             hcCCCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         79 HTGERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        79 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ++|++||+|.+|++.|.+.+.|..|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            46777788888888888888888887777654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.01  E-value=8.9e-11  Score=51.94  Aligned_cols=29  Identities=45%  Similarity=0.842  Sum_probs=22.8

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCCC
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGEK  111 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  111 (171)
                      +||.|++|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57788888888888888888888887764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.5e-10  Score=51.10  Aligned_cols=29  Identities=31%  Similarity=0.635  Sum_probs=23.2

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCCC
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGEK  111 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~  111 (171)
                      +||.|++|++.|.+.+.|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=9.1e-11  Score=51.29  Aligned_cols=28  Identities=39%  Similarity=0.842  Sum_probs=21.5

Q ss_pred             CCCccCccchhhcCCHHHHHHHHHHhcC
Q psy12258         82 ERNYQCEFCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        82 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      ++||+|+.|++.|.+.+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4677888888888888888888777764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.95  E-value=1.8e-11  Score=60.70  Aligned_cols=39  Identities=26%  Similarity=0.519  Sum_probs=30.5

Q ss_pred             HHHHHHHHhcCCCCccCcc--cccccCCchhHHHHHHHhccC
Q psy12258         99 YLQNHRRIHTGEKPHFCPV--CNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus        99 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      .+..|+. |.+++||.|.+  |++.|...+.|..|+++|.++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            3445653 88888888876  888888888888888888765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.7e-10  Score=53.65  Aligned_cols=32  Identities=25%  Similarity=0.680  Sum_probs=24.9

Q ss_pred             ccCcc--chhhcCCHHHHHHHHHHhcCCCCccCc
Q psy12258         85 YQCEF--CHKAFRASSYLQNHRRIHTGEKPHFCP  116 (171)
Q Consensus        85 ~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~  116 (171)
                      |.|+.  |++.|.....|.+|+++|++++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56655  888888888888888888888888775

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.6e-10  Score=50.62  Aligned_cols=28  Identities=36%  Similarity=0.778  Sum_probs=21.1

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCPV--CNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +||+|++  |+++|...+.|.+|+|+|.++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4777777  888888888888888777653

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.7e-10  Score=50.22  Aligned_cols=28  Identities=32%  Similarity=0.733  Sum_probs=21.4

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCPV--CNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +||.|++  ||++|...+.|.+|+|+|.++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5778866  888888888888888887653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4.7e-10  Score=52.13  Aligned_cols=27  Identities=44%  Similarity=0.749  Sum_probs=18.2

Q ss_pred             cccccCChhhHHHHHHHcCCCCCeeCC
Q psy12258          5 CGKSFFSSTALKVHNRVHLGLKPYGCE   31 (171)
Q Consensus         5 C~~~f~~~~~l~~H~~~h~~~~~~~C~   31 (171)
                      |++.|.+...|++|+++|++++||.|+
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            666666666666666666666666664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=6.2e-10  Score=47.38  Aligned_cols=26  Identities=54%  Similarity=0.870  Sum_probs=19.8

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhc
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      +||+|.+||+.|.+.+.|..|.++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57778788888888888887777764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.81  E-value=1.9e-09  Score=48.52  Aligned_cols=29  Identities=31%  Similarity=0.663  Sum_probs=24.0

Q ss_pred             CCCccCcc--cccccCCchhHHHHHHHhccC
Q psy12258        110 EKPHFCPV--CNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       110 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      ++||.|++  |+++|...+.|.+|+++|...
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57888877  899999999999998888753

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=2.6e-10  Score=56.41  Aligned_cols=38  Identities=16%  Similarity=0.350  Sum_probs=22.2

Q ss_pred             HHHHHHHcCCCCCeeCCc--cchhccCcccHHHhhhhcCCCC
Q psy12258         15 LKVHNRVHLGLKPYGCEV--CGRHFRQWGDLKYHKASLHSDV   54 (171)
Q Consensus        15 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~   54 (171)
                      |..|+ .|.+++||.|++  |++.|....+|..|++ +|+++
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r-~Htge   46 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLED   46 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHH-HHTTT
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcc-cccCC
Confidence            34444 366666666655  6666666666666665 45554

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=3.6e-09  Score=46.86  Aligned_cols=28  Identities=39%  Similarity=0.813  Sum_probs=22.6

Q ss_pred             CCccCcc--chhhcCCHHHHHHHHHHhcCC
Q psy12258         83 RNYQCEF--CHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        83 ~~~~C~~--C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +||.|++  |++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888774

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.9e-09  Score=46.21  Aligned_cols=26  Identities=42%  Similarity=0.931  Sum_probs=22.3

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhc
Q psy12258        111 KPHFCPV--CNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       111 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  136 (171)
                      +||.|+.  ||++|...+.|.+|+++|.
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5888877  9999999999999998874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.69  E-value=2.4e-09  Score=46.98  Aligned_cols=27  Identities=37%  Similarity=0.897  Sum_probs=20.8

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhcc
Q psy12258        111 KPHFCPV--CNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       111 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  137 (171)
                      +||+|++  |+++|...+.|.+|+++|.+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5778866  88888888888888887753

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4.5e-09  Score=46.98  Aligned_cols=28  Identities=32%  Similarity=0.775  Sum_probs=18.2

Q ss_pred             CCccCc--ccccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCP--VCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +||.|+  .|+++|...+.|.+|+++|.++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            466664  4777777777777777766553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=5.2e-09  Score=46.37  Aligned_cols=28  Identities=46%  Similarity=0.941  Sum_probs=21.0

Q ss_pred             CCccCcc--chhhcCCHHHHHHHHHHhcCC
Q psy12258         83 RNYQCEF--CHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        83 ~~~~C~~--C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +||.|++  |++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4677765  888888888888888777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=8.2e-09  Score=41.73  Aligned_cols=26  Identities=38%  Similarity=0.833  Sum_probs=22.1

Q ss_pred             CccCcccccccCCchhHHHHHHHhcc
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      |.+|++|++.|+.+..|..|+|.|.+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56899999999999999999988753

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.4e-08  Score=45.35  Aligned_cols=29  Identities=52%  Similarity=0.976  Sum_probs=22.2

Q ss_pred             CCccCc--cchhhcCCHHHHHHHHHHhcCCC
Q psy12258         83 RNYQCE--FCHKAFRASSYLQNHRRIHTGEK  111 (171)
Q Consensus        83 ~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~  111 (171)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            477784  48888888888888888887764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=6.2e-08  Score=41.02  Aligned_cols=29  Identities=38%  Similarity=0.784  Sum_probs=20.2

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhccC
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      ++||.|++|+..|..+..+.-|.|+|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46777777777777777777777776554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.41  E-value=7.8e-08  Score=43.07  Aligned_cols=28  Identities=36%  Similarity=0.781  Sum_probs=21.1

Q ss_pred             CCCccCcc--chhhcCCHHHHHHHHHHhcC
Q psy12258         82 ERNYQCEF--CHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        82 ~~~~~C~~--C~~~~~~~~~l~~H~~~h~~  109 (171)
                      ++||.|++  |++.|...+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777766  88888888888888777765

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.40  E-value=3.6e-08  Score=43.12  Aligned_cols=27  Identities=48%  Similarity=0.924  Sum_probs=19.4

Q ss_pred             CCccCcc--chhhcCCHHHHHHHHHHhcC
Q psy12258         83 RNYQCEF--CHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        83 ~~~~C~~--C~~~~~~~~~l~~H~~~h~~  109 (171)
                      +||+|++  |++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4677755  77777777777777777754

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=9.9e-08  Score=39.81  Aligned_cols=27  Identities=37%  Similarity=0.748  Sum_probs=21.6

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhc
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      ++||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478888888888888888888887774

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.3e-07  Score=39.98  Aligned_cols=27  Identities=30%  Similarity=0.666  Sum_probs=21.8

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhcc
Q psy12258        111 KPHFCPV--CNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       111 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  137 (171)
                      +||.|.+  |++++...++|++|++.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788866  88899999999999887663

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.3e-07  Score=39.16  Aligned_cols=27  Identities=30%  Similarity=0.588  Sum_probs=16.9

Q ss_pred             CCccCcccccccCCchhHHHHHHHhcc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      +||+|..|...-...+.|.-|+|.|.+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            566666666666666666666666654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=8e-08  Score=41.52  Aligned_cols=26  Identities=42%  Similarity=0.844  Sum_probs=19.5

Q ss_pred             CCccCcc--chhhcCCHHHHHHHHHHhc
Q psy12258         83 RNYQCEF--CHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        83 ~~~~C~~--C~~~~~~~~~l~~H~~~h~  108 (171)
                      +||.|++  |++.|...+.|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  8888888888888877764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=3.3e-07  Score=38.75  Aligned_cols=29  Identities=31%  Similarity=0.702  Sum_probs=24.5

Q ss_pred             CCCccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         82 ERNYQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        82 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      ++||.|++|+..|..+..+..|+++|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47889999999999999999998888653

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=3.2e-07  Score=36.98  Aligned_cols=24  Identities=46%  Similarity=0.901  Sum_probs=19.0

Q ss_pred             CCCccccccCChhhHHHHHHHcCC
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHLG   24 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~~   24 (171)
                      +|+.|++.|.++..|..|++.|++
T Consensus         3 kc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             ccchhhhHhcchhHHHHHhhccCC
Confidence            578888888888888888887764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=4.3e-07  Score=39.31  Aligned_cols=31  Identities=42%  Similarity=0.785  Sum_probs=22.5

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCCCCc
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGEKPH  113 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~  113 (171)
                      +...|..||+.|...-.|.+|..+|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4456777777777777777777777777776

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=5.9e-07  Score=37.11  Aligned_cols=28  Identities=50%  Similarity=0.795  Sum_probs=23.9

Q ss_pred             CCCccCccchhhcCCHHHHHHHHHHhcC
Q psy12258         82 ERNYQCEFCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        82 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      ++||+|+.|.......+.|..|++.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4788899998888888889999888876

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.3e-06  Score=36.33  Aligned_cols=28  Identities=21%  Similarity=0.510  Sum_probs=24.8

Q ss_pred             CCccCcccccccCCchhHHHHHHHhccC
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      +||+|..|....++.++|.+|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5899999999999999999999887765

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.02  E-value=1.2e-06  Score=36.42  Aligned_cols=26  Identities=31%  Similarity=0.792  Sum_probs=23.0

Q ss_pred             CCCccCccchhhcCCHHHHHHHHHHh
Q psy12258         82 ERNYQCEFCHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        82 ~~~~~C~~C~~~~~~~~~l~~H~~~h  107 (171)
                      ++||.|..||+.|..+....+|..+|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            57899999999999999999998877

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.1e-06  Score=37.98  Aligned_cols=31  Identities=42%  Similarity=0.747  Sum_probs=25.1

Q ss_pred             CCeeCCccchhccCcccHHHhhhhcCCCCCcc
Q psy12258         26 KPYGCEVCGRHFRQWGDLKYHKASLHSDVKAF   57 (171)
Q Consensus        26 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~   57 (171)
                      +...|+.||+.|.....|.+|.. .|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhkl-shs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKL-SHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGG-GSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhc-ccCCCCCC
Confidence            45678888888888888888876 68888886

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.00  E-value=1.2e-06  Score=34.87  Aligned_cols=24  Identities=29%  Similarity=0.649  Sum_probs=21.2

Q ss_pred             ccCcccccccCCchhHHHHHHHhc
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      |+|..|.++|..++.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999998874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.7e-06  Score=35.30  Aligned_cols=26  Identities=27%  Similarity=0.437  Sum_probs=21.6

Q ss_pred             ccCcccccccCCchhHHHHHHHhccC
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTHNVD  138 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h~~~  138 (171)
                      |.|+.||....-.+-|.+|+|.|.++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            77888888888888888888888753

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=2.5e-06  Score=34.91  Aligned_cols=26  Identities=31%  Similarity=0.599  Sum_probs=19.4

Q ss_pred             CCccCcccccccCCchhHHHHHHHhc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      +||+|..|...-...++|.+|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57777777777777777777777764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.9e-06  Score=35.35  Aligned_cols=25  Identities=40%  Similarity=0.684  Sum_probs=16.1

Q ss_pred             ccCcccccccCCchhHHHHHHHhcc
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      ..|.+||++|...+.|.+|+-+|.+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4566667777666666666666553

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=8.3e-06  Score=32.91  Aligned_cols=26  Identities=58%  Similarity=0.859  Sum_probs=22.7

Q ss_pred             CCCccccccCChhhHHHHHHHcCCCC
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHLGLK   26 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~~~~   26 (171)
                      +|+.|.+.|..+..|..|-+.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58999999999999999999888874

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=2.9e-06  Score=35.22  Aligned_cols=23  Identities=26%  Similarity=0.842  Sum_probs=21.2

Q ss_pred             CccCcccccccCCchhHHHHHHH
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNT  134 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~  134 (171)
                      ||.|..|+.+|..+.+|.+||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68999999999999999999975

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=5.6e-06  Score=37.83  Aligned_cols=26  Identities=42%  Similarity=0.783  Sum_probs=23.0

Q ss_pred             cCCCCccCcccccccCCchhHHHHHH
Q psy12258        108 TGEKPHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus       108 ~~~~~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      ++.+||.|..|++.|..+.++.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46789999999999999999999964

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=1.3e-05  Score=33.20  Aligned_cols=26  Identities=38%  Similarity=0.611  Sum_probs=16.7

Q ss_pred             ccCccchhhcCCHHHHHHHHHHhcCC
Q psy12258         85 YQCEFCHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        85 ~~C~~C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      |.|+.|+....-.+-|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            55666666666666666666666654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.72  E-value=1.1e-05  Score=36.65  Aligned_cols=31  Identities=26%  Similarity=0.584  Sum_probs=24.0

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhccCcc
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLNTHNVDAR  140 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  140 (171)
                      .+.|+|.+|++.|.+...|.-|++.|..+..
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            4568888888888888888888888765543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.70  E-value=1.2e-05  Score=33.19  Aligned_cols=25  Identities=44%  Similarity=0.826  Sum_probs=20.6

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHh
Q psy12258        111 KPHFCPV--CNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       111 ~~~~C~~--C~~~f~~~~~l~~H~~~h  135 (171)
                      .||+|+.  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4788865  889999999999988877

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=7.2e-06  Score=33.60  Aligned_cols=23  Identities=52%  Similarity=0.992  Sum_probs=14.1

Q ss_pred             CCccccccCChhhHHHHHHHcCC
Q psy12258          2 CDTCGKSFFSSTALKVHNRVHLG   24 (171)
Q Consensus         2 C~~C~~~f~~~~~l~~H~~~h~~   24 (171)
                      |.+|++.|.....|.+|+.+|++
T Consensus         5 c~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           5 CAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             CTTTCCEESSHHHHHHHGGGTSC
T ss_pred             HHHHhHHHHHHHHHHHHhhcccC
Confidence            55666666666666666666554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.7e-05  Score=33.42  Aligned_cols=26  Identities=27%  Similarity=0.667  Sum_probs=16.8

Q ss_pred             CCccCcc--chhhcCCHHHHHHHHHHhc
Q psy12258         83 RNYQCEF--CHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        83 ~~~~C~~--C~~~~~~~~~l~~H~~~h~  108 (171)
                      +||.|..  |++.++..++|+.|+..++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4566654  6777777777777766544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=2.2e-05  Score=32.62  Aligned_cols=29  Identities=31%  Similarity=0.485  Sum_probs=21.7

Q ss_pred             CCeeCCccchhccCcccHHHhhhhcCCCC
Q psy12258         26 KPYGCEVCGRHFRQWGDLKYHKASLHSDV   54 (171)
Q Consensus        26 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   54 (171)
                      +||.|++|.....+.++|..|++..|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            46788888888888888888877766543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=5.9e-05  Score=31.32  Aligned_cols=27  Identities=26%  Similarity=0.405  Sum_probs=19.9

Q ss_pred             CCccCcccccccCCchhHHHHHHHhcc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      +||.|..|.......++|..|++.-|.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            477788888777777788888776553

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=1.5e-05  Score=33.89  Aligned_cols=26  Identities=42%  Similarity=0.765  Sum_probs=21.5

Q ss_pred             CCccCcc--cccccCCchhHHHHH-HHhc
Q psy12258        111 KPHFCPV--CNKMFRVRSDMKRHL-NTHN  136 (171)
Q Consensus       111 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~  136 (171)
                      +||.|+.  |++.|...++-.+|+ |.|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            5788877  999999999999997 6664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=2.9e-05  Score=31.66  Aligned_cols=26  Identities=42%  Similarity=0.751  Sum_probs=21.9

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhc
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      +||+|..|.......++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            67888888888888888888888874

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.46  E-value=2.6e-05  Score=33.11  Aligned_cols=27  Identities=37%  Similarity=0.760  Sum_probs=19.7

Q ss_pred             CeeCCccchhccCcccHHHhhhhcCCC
Q psy12258         27 PYGCEVCGRHFRQWGDLKYHKASLHSD   53 (171)
Q Consensus        27 ~~~C~~C~~~f~~~~~l~~H~~~~h~~   53 (171)
                      ||.|.+|++.|..+.-|.+|..+.|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            567777777777777777777766665

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.40  E-value=3.4e-05  Score=32.76  Aligned_cols=23  Identities=35%  Similarity=0.690  Sum_probs=17.5

Q ss_pred             CccCcccccccCCchhHHHHHHH
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNT  134 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~  134 (171)
                      ||.|.+|++.|..+..|.+|.+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            57788888888888888788654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=6.5e-05  Score=30.98  Aligned_cols=24  Identities=29%  Similarity=0.636  Sum_probs=21.4

Q ss_pred             CCccccccCChhhHHHHHHHcCCC
Q psy12258          2 CDTCGKSFFSSTALKVHNRVHLGL   25 (171)
Q Consensus         2 C~~C~~~f~~~~~l~~H~~~h~~~   25 (171)
                      |..|..+|.++..|+.||..|+++
T Consensus         7 cs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           7 CSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eHHHHHHHHHHHhheeeeecccCC
Confidence            788999999999999999998864

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.32  E-value=6.5e-05  Score=34.00  Aligned_cols=28  Identities=32%  Similarity=0.623  Sum_probs=18.6

Q ss_pred             CCCeeCCccchhccCcccHHHhhhhcCCC
Q psy12258         25 LKPYGCEVCGRHFRQWGDLKYHKASLHSD   53 (171)
Q Consensus        25 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~   53 (171)
                      .+.|.|.+|++.|.+...|--|++ .|..
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~-~Hr~   30 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMN-VHRR   30 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHH-TTCC
T ss_pred             CCccCCCCCCCccCCcccccchHh-hhcc
Confidence            345777777777777777777766 4543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=7.6e-05  Score=29.53  Aligned_cols=22  Identities=27%  Similarity=0.717  Sum_probs=18.4

Q ss_pred             CccCcccccccCCchhHHHHHH
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      ||+|..|...|..+.+|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6888888888888888888874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.24  E-value=7.5e-05  Score=29.54  Aligned_cols=23  Identities=35%  Similarity=0.918  Sum_probs=12.0

Q ss_pred             ccccchhhhccChHHHHHHHhhh
Q psy12258         57 FQCEYCGKDFARKYSLVVHRRIH   79 (171)
Q Consensus        57 ~~C~~C~~~~~~~~~l~~h~~~~   79 (171)
                      |+|+.|..+|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            34555555555555555555544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00011  Score=29.94  Aligned_cols=26  Identities=19%  Similarity=0.454  Sum_probs=17.1

Q ss_pred             CccCcccccccCCchhHHHHHHHhcc
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~h~~  137 (171)
                      |-+|+.|.++..++..|+-|-|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            34667777777777777777666643

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00011  Score=33.42  Aligned_cols=27  Identities=30%  Similarity=0.618  Sum_probs=22.1

Q ss_pred             cCCCCccCccchhhcCCHHHHHHHHHH
Q psy12258         80 TGERNYQCEFCHKAFRASSYLQNHRRI  106 (171)
Q Consensus        80 ~~~~~~~C~~C~~~~~~~~~l~~H~~~  106 (171)
                      +|-+||.|..|++.|-+..++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            366889999999999999998888653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.12  E-value=0.00021  Score=28.68  Aligned_cols=23  Identities=52%  Similarity=0.989  Sum_probs=9.0

Q ss_pred             CccchhhcCCHHHHHHHHHHhcC
Q psy12258         87 CEFCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        87 C~~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      |+.|.+.|.++-.|..|-+.|++
T Consensus         3 cp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             CcchHHHHHHhHhhhhccccccC
Confidence            33333344443333333333333

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00039  Score=32.77  Aligned_cols=30  Identities=23%  Similarity=0.462  Sum_probs=24.8

Q ss_pred             CCccCcccccccCCchhHHHHHHHhccCcc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNVDAR  140 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  140 (171)
                      ..|.|..|||.|.....|++|...|-...-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~t~l   34 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGVTSL   34 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCcceE
Confidence            358899999999999999999888865433

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00024  Score=30.06  Aligned_cols=28  Identities=39%  Similarity=0.743  Sum_probs=22.1

Q ss_pred             CCeeCCc--cchhccCcccHHHhhhhcCCC
Q psy12258         26 KPYGCEV--CGRHFRQWGDLKYHKASLHSD   53 (171)
Q Consensus        26 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~   53 (171)
                      +||.|++  |.+.|++.++-..|+...|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5788877  999999998888887556654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.99  E-value=0.00021  Score=28.96  Aligned_cols=21  Identities=29%  Similarity=0.706  Sum_probs=18.6

Q ss_pred             CccCcccccccCCchhHHHHH
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHL  132 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~  132 (171)
                      ||+|+.||+.+-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            689999999999999998885

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.94  E-value=0.00017  Score=28.46  Aligned_cols=23  Identities=39%  Similarity=0.800  Sum_probs=14.9

Q ss_pred             CeeCCccchhccCcccHHHhhhh
Q psy12258         27 PYGCEVCGRHFRQWGDLKYHKAS   49 (171)
Q Consensus        27 ~~~C~~C~~~f~~~~~l~~H~~~   49 (171)
                      ||.|..|...|-+..+|+.|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            56666666666666666666643

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00023  Score=29.33  Aligned_cols=20  Identities=35%  Similarity=0.795  Sum_probs=7.9

Q ss_pred             ccccchhhhccChHHHHHHH
Q psy12258         57 FQCEYCGKDFARKYSLVVHR   76 (171)
Q Consensus        57 ~~C~~C~~~~~~~~~l~~h~   76 (171)
                      |.|..|+.+|..+..|..||
T Consensus         2 y~C~~CnF~FKTKGNLTKHm   21 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHM   21 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhh
Confidence            33333444444444443333

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.68  E-value=0.00056  Score=27.05  Aligned_cols=24  Identities=29%  Similarity=0.609  Sum_probs=17.0

Q ss_pred             ccCcccccccCCchhHHHHHHHhc
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      |.|++|=+.|..+.++..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            567777777777777777776543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.55  E-value=0.00059  Score=28.00  Aligned_cols=24  Identities=38%  Similarity=0.894  Sum_probs=15.3

Q ss_pred             CccCcc--chhhcCCHHHHHHHHHHh
Q psy12258         84 NYQCEF--CHKAFRASSYLQNHRRIH  107 (171)
Q Consensus        84 ~~~C~~--C~~~~~~~~~l~~H~~~h  107 (171)
                      ||+|+-  |++.|...+.|.+|..+|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            556643  666677777777666655

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00065  Score=28.04  Aligned_cols=23  Identities=22%  Similarity=0.613  Sum_probs=12.9

Q ss_pred             CccCccchhhcCCHHHHHHHHHH
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRI  106 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~  106 (171)
                      ||+|..|....++.+.|..|+..
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHH
Confidence            45555555555555555555544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00083  Score=27.32  Aligned_cols=25  Identities=28%  Similarity=0.513  Sum_probs=17.9

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhc
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      |.+|+.|.+...+.+.|+.|.++|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4567777777777777777777664

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0011  Score=29.66  Aligned_cols=26  Identities=31%  Similarity=0.774  Sum_probs=14.4

Q ss_pred             CCCccC--cccccccCCchhHHHHHHHh
Q psy12258        110 EKPHFC--PVCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       110 ~~~~~C--~~C~~~f~~~~~l~~H~~~h  135 (171)
                      ++||.|  +-|+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            455555  34555566555555555544

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.45  E-value=0.00057  Score=28.17  Aligned_cols=18  Identities=39%  Similarity=0.610  Sum_probs=8.1

Q ss_pred             cccccCCchhHHHHHHHh
Q psy12258        118 CNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       118 C~~~f~~~~~l~~H~~~h  135 (171)
                      |.+.|.+.-.|.+|.-.|
T Consensus        10 c~kgf~tlhhltrhs~th   27 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTH   27 (30)
T ss_dssp             CCCEESSTTHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhccc
Confidence            444444444444444433

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0012  Score=26.70  Aligned_cols=22  Identities=27%  Similarity=0.504  Sum_probs=18.1

Q ss_pred             CCCccccccCChhhHHHHHHHc
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVH   22 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h   22 (171)
                      +||+|+....++++|..|++.-
T Consensus         4 qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           4 HCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHHHT
T ss_pred             cCCcchhheeehhhhhHHhhhc
Confidence            4888998888999998888753

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.0012  Score=27.21  Aligned_cols=26  Identities=31%  Similarity=0.804  Sum_probs=21.9

Q ss_pred             CeeCCccchhccCcccHHHhhhhcCC
Q psy12258         27 PYGCEVCGRHFRQWGDLKYHKASLHS   52 (171)
Q Consensus        27 ~~~C~~C~~~f~~~~~l~~H~~~~h~   52 (171)
                      .|+|..||+...+...|+.|....|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            47899999999999999999876664

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0012  Score=29.55  Aligned_cols=27  Identities=22%  Similarity=0.550  Sum_probs=19.8

Q ss_pred             CCCccC--ccchhhcCCHHHHHHHHHHhc
Q psy12258         82 ERNYQC--EFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        82 ~~~~~C--~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      ++||.|  +.|+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            577777  558888888888877776663

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.001  Score=28.77  Aligned_cols=25  Identities=32%  Similarity=0.666  Sum_probs=21.1

Q ss_pred             CccCcccccccCCchhHHHHHHHhc
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~h~  136 (171)
                      .|.|.+||+.|..+..+.+|...-.
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            4889999999999999999966443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.99  E-value=0.0029  Score=25.99  Aligned_cols=28  Identities=36%  Similarity=0.720  Sum_probs=24.0

Q ss_pred             CCccCcc--chhhcCCHHHHHHHHHHhcCC
Q psy12258         83 RNYQCEF--CHKAFRASSYLQNHRRIHTGE  110 (171)
Q Consensus        83 ~~~~C~~--C~~~~~~~~~l~~H~~~h~~~  110 (171)
                      +||.|..  |.+.|.+...|.+|...|+++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4677765  999999999999999999874

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.87  E-value=0.0028  Score=25.51  Aligned_cols=23  Identities=22%  Similarity=0.498  Sum_probs=19.2

Q ss_pred             CccCccchhhcCCHHHHHHHHHH
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRI  106 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~  106 (171)
                      ||+|+.||+-+-.+..|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68899999998888888888654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.50  E-value=0.003  Score=26.96  Aligned_cols=22  Identities=23%  Similarity=0.481  Sum_probs=18.9

Q ss_pred             CccCcccccccCCchhHHHHHH
Q psy12258        112 PHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      .|.|+-||..|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4789999999999999998863

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.46  E-value=0.0044  Score=25.01  Aligned_cols=22  Identities=32%  Similarity=0.763  Sum_probs=16.2

Q ss_pred             ccCcccccccCCchhHHHHHHH
Q psy12258        113 HFCPVCNKMFRVRSDMKRHLNT  134 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~  134 (171)
                      |.|+.|+-....+++|+-|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            6677777777777777777764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.29  E-value=0.0031  Score=24.83  Aligned_cols=22  Identities=23%  Similarity=0.555  Sum_probs=11.6

Q ss_pred             eeCCccchhccCcccHHHhhhh
Q psy12258         28 YGCEVCGRHFRQWGDLKYHKAS   49 (171)
Q Consensus        28 ~~C~~C~~~f~~~~~l~~H~~~   49 (171)
                      |.|+.|=+.|....+|..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4455555555555555555443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.0054  Score=28.76  Aligned_cols=26  Identities=27%  Similarity=0.533  Sum_probs=21.7

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcC
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      .|.|..|++.|+....|+.|...|.-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            57888999999999999999888743

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.017  Score=23.64  Aligned_cols=24  Identities=21%  Similarity=0.530  Sum_probs=13.6

Q ss_pred             ccCccchhhcCCHHHHHHHHHHhc
Q psy12258         85 YQCEFCHKAFRASSYLQNHRRIHT  108 (171)
Q Consensus        85 ~~C~~C~~~~~~~~~l~~H~~~h~  108 (171)
                      |.|.-||+.+.+...+..|+...+
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             eechhHHHHHhhccCceEEEeecc
Confidence            455566666666666665554433

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.0083  Score=25.80  Aligned_cols=26  Identities=23%  Similarity=0.535  Sum_probs=20.0

Q ss_pred             CccCccchhhcCCHHHHHHHHHHhcC
Q psy12258         84 NYQCEFCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        84 ~~~C~~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      .|.|..|++.|+....+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888765544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.64  E-value=0.0066  Score=26.43  Aligned_cols=20  Identities=35%  Similarity=0.365  Sum_probs=15.7

Q ss_pred             ccccCChhhHHHHHHHcCCC
Q psy12258          6 GKSFFSSTALKVHNRVHLGL   25 (171)
Q Consensus         6 ~~~f~~~~~l~~H~~~h~~~   25 (171)
                      ++.|.....|..||++|+++
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45688888888888888765

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.61  E-value=0.0075  Score=24.48  Aligned_cols=19  Identities=58%  Similarity=0.992  Sum_probs=15.0

Q ss_pred             ccccccCCchhHHHHHHHh
Q psy12258        117 VCNKMFRVRSDMKRHLNTH  135 (171)
Q Consensus       117 ~C~~~f~~~~~l~~H~~~h  135 (171)
                      -|++.|...+.+++|+..|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3788888888888887766

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.49  E-value=0.016  Score=24.13  Aligned_cols=20  Identities=35%  Similarity=0.818  Sum_probs=9.3

Q ss_pred             hhhhccChHHHHHHHhhhcC
Q psy12258         62 CGKDFARKYSLVVHRRIHTG   81 (171)
Q Consensus        62 C~~~~~~~~~l~~h~~~~~~   81 (171)
                      |+..|...+.|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            44444444444444444443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.19  E-value=0.015  Score=24.17  Aligned_cols=21  Identities=38%  Similarity=0.494  Sum_probs=12.4

Q ss_pred             cchhhcCCHHHHHHHHHHhcC
Q psy12258         89 FCHKAFRASSYLQNHRRIHTG  109 (171)
Q Consensus        89 ~C~~~~~~~~~l~~H~~~h~~  109 (171)
                      .|+..|.-...|..|+..|++
T Consensus        10 dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          10 DCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GGCCEESSHHHHHHHHHHHHC
T ss_pred             CcchhhccchhhhHHhhhhcC
Confidence            355666666666666665554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.01  E-value=0.012  Score=27.50  Aligned_cols=27  Identities=30%  Similarity=0.480  Sum_probs=20.4

Q ss_pred             CCCeeCCccchhccCcccHHHhhhhcC
Q psy12258         25 LKPYGCEVCGRHFRQWGDLKYHKASLH   51 (171)
Q Consensus        25 ~~~~~C~~C~~~f~~~~~l~~H~~~~h   51 (171)
                      +.|..|++|+....+..+|.+|+...|
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            567788888888888888888876544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.015  Score=25.23  Aligned_cols=18  Identities=17%  Similarity=0.333  Sum_probs=8.8

Q ss_pred             cccCCchhHHHHHHHhcc
Q psy12258        120 KMFRVRSDMKRHLNTHNV  137 (171)
Q Consensus       120 ~~f~~~~~l~~H~~~h~~  137 (171)
                      +.|...-.|..|+|+|.+
T Consensus        15 ~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHC
T ss_pred             CcchhHHHHHHHHhhcCC
Confidence            444444455555555543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.61  E-value=0.029  Score=26.11  Aligned_cols=26  Identities=27%  Similarity=0.373  Sum_probs=22.3

Q ss_pred             CCccccccCChhhHHHHHHHcCCCCC
Q psy12258          2 CDTCGKSFFSSTALKVHNRVHLGLKP   27 (171)
Q Consensus         2 C~~C~~~f~~~~~l~~H~~~h~~~~~   27 (171)
                      ||+|+.+..+..+|++|+..-+..+|
T Consensus        27 cpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          27 CPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhccC
Confidence            89999999999999999987665543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.60  E-value=0.036  Score=23.85  Aligned_cols=24  Identities=29%  Similarity=0.570  Sum_probs=14.1

Q ss_pred             CCccCcccccccCCchhHHHHHHH
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNT  134 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~  134 (171)
                      ..|+|.+|.+.+..-+++-+|.-.
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cEEEeehhhHHHHHHHHHHHHHHh
Confidence            345666666666666666666543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.77  E-value=0.082  Score=26.46  Aligned_cols=33  Identities=21%  Similarity=0.476  Sum_probs=26.9

Q ss_pred             CCccCcccccccCCchhHHHHHHHhccCccccc
Q psy12258        111 KPHFCPVCNKMFRVRSDMKRHLNTHNVDARQYL  143 (171)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  143 (171)
                      .-|.|..|...|.+...|..|+..|+.+-....
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hneefqkra   49 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA   49 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccHHHHHHH
Confidence            458999999999999999999999886655433

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.12  E-value=0.071  Score=21.16  Aligned_cols=20  Identities=30%  Similarity=0.599  Sum_probs=15.1

Q ss_pred             ccccccCCchhHHHHHHHhc
Q psy12258        117 VCNKMFRVRSDMKRHLNTHN  136 (171)
Q Consensus       117 ~C~~~f~~~~~l~~H~~~h~  136 (171)
                      -|++.|..-..|.-|+-.|.
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            48888888888888876663

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.018  Score=29.62  Aligned_cols=24  Identities=25%  Similarity=0.569  Sum_probs=19.9

Q ss_pred             CCCccCcccccccCCchhHHHHHH
Q psy12258        110 EKPHFCPVCNKMFRVRSDMKRHLN  133 (171)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~  133 (171)
                      ...|-|..|++.|.+...|..|++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            345789999999999999999984

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.64  E-value=0.06  Score=27.13  Aligned_cols=40  Identities=18%  Similarity=0.581  Sum_probs=27.1

Q ss_pred             CCCCeeCCccchhccCcccHHHhhhhcCCCCCcccccchhhhcc
Q psy12258         24 GLKPYGCEVCGRHFRQWGDLKYHKASLHSDVKAFQCEYCGKDFA   67 (171)
Q Consensus        24 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~   67 (171)
                      ....|.|+.|++.|+....+..    .-.....|.|..|+....
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~~L----~d~~~~~F~C~~C~~el~   50 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEANQL----FDPMTGTFRCTFCHTEVE   50 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHHH----EETTTTEEBCSSSCCBCE
T ss_pred             cCCceECCCCCCCcchhhHHHh----cCcCCCeEEecCCCCEEe
Confidence            3456999999999977665443    222345688999986543

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.58  E-value=0.034  Score=24.95  Aligned_cols=26  Identities=35%  Similarity=0.931  Sum_probs=15.2

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCCCCccCcccccc
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNKM  121 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~  121 (171)
                      +-|.|+.||..+             .++-|-.|++|+..
T Consensus         4 ~~~~C~vCG~i~-------------~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEAPEYCPVCGAP   29 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCCCSBCTTTCCB
T ss_pred             cEEECCCCCCEe-------------cCCCCCcCCCCCCc
Confidence            346677777442             33455677777743

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=89.29  E-value=0.054  Score=24.06  Aligned_cols=25  Identities=32%  Similarity=0.778  Sum_probs=14.1

Q ss_pred             CCccCccchhhcCCHHHHHHHHHHhcCCCCccCccccc
Q psy12258         83 RNYQCEFCHKAFRASSYLQNHRRIHTGEKPHFCPVCNK  120 (171)
Q Consensus        83 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~  120 (171)
                      +.|.|+.||..             +.++-|-+|++|+.
T Consensus         4 ~~~vC~vCGyi-------------~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           4 KFHLCPICGYI-------------HKGEDFEKCPICFR   28 (36)
T ss_dssp             CEEECSSSCCE-------------EESSCCSBCTTTCC
T ss_pred             CEEECCCCCCE-------------eeCCCCCcCCCCCC
Confidence            44667777643             23345556777764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.57  E-value=0.028  Score=28.92  Aligned_cols=22  Identities=32%  Similarity=0.433  Sum_probs=12.6

Q ss_pred             CeeCCccchhccCcccHHHhhh
Q psy12258         27 PYGCEVCGRHFRQWGDLKYHKA   48 (171)
Q Consensus        27 ~~~C~~C~~~f~~~~~l~~H~~   48 (171)
                      .|-|..|++.|.+...|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            3555666666666555555544

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=88.14  E-value=0.054  Score=24.25  Aligned_cols=17  Identities=0%  Similarity=-0.041  Sum_probs=8.0

Q ss_pred             HhcCCCCccCccccccc
Q psy12258        106 IHTGEKPHFCPVCNKMF  122 (171)
Q Consensus       106 ~h~~~~~~~C~~C~~~f  122 (171)
                      ......+-.|..||..+
T Consensus        16 ~~pPk~~g~CD~cg~~L   32 (37)
T d2ak3a2          16 FNPPKTMGIDDLTGEPL   32 (37)
T ss_dssp             TBCCSSTTBCTTTCCBC
T ss_pred             cCCccccCCccCCCCcC
Confidence            33444445555555433

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.32  E-value=0.28  Score=22.88  Aligned_cols=20  Identities=20%  Similarity=0.650  Sum_probs=17.2

Q ss_pred             ccCcccccccCCchhHHHHH
Q psy12258        113 HFCPVCNKMFRVRSDMKRHL  132 (171)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~  132 (171)
                      -.|..|+..++.+.+++.|+
T Consensus         7 ~eC~lC~vKYs~~~SvrdHi   26 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHI   26 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccCcccceeeeeecchHhhh
Confidence            57888998888888888887

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.46  E-value=0.23  Score=24.77  Aligned_cols=23  Identities=26%  Similarity=0.561  Sum_probs=18.6

Q ss_pred             CCCccccccCChhhHHHHHHHcC
Q psy12258          1 MCDTCGKSFFSSTALKVHNRVHL   23 (171)
Q Consensus         1 ~C~~C~~~f~~~~~l~~H~~~h~   23 (171)
                      +|.+|+..|-....|..|+..|.
T Consensus        20 QC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          20 QCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eechhHHHHhhHHHHHHHHHhcc
Confidence            48888888888888888887764

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.74  E-value=0.19  Score=22.52  Aligned_cols=10  Identities=20%  Similarity=0.338  Sum_probs=5.5

Q ss_pred             eeCCccchhc
Q psy12258         28 YGCEVCGRHF   37 (171)
Q Consensus        28 ~~C~~C~~~f   37 (171)
                      ..|+.||..|
T Consensus         3 r~C~~cG~~Y   12 (38)
T d1akya2           3 LIHPASGRSY   12 (38)
T ss_dssp             EECTTTCCEE
T ss_pred             cCCcCccchh
Confidence            3455666555

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=82.18  E-value=0.55  Score=20.28  Aligned_cols=20  Identities=20%  Similarity=0.534  Sum_probs=10.7

Q ss_pred             CccchhhcCCHHHHHHHHHH
Q psy12258         87 CEFCHKAFRASSYLQNHRRI  106 (171)
Q Consensus        87 C~~C~~~~~~~~~l~~H~~~  106 (171)
                      |..|+-.|.+...+..|...
T Consensus        11 C~~CDI~Fn~~~T~~aHKk~   30 (36)
T d1fu9a_          11 CSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             ETTTTEECSSHHHHHHHHHH
T ss_pred             HhhCCceehhHHHHHHHHHh
Confidence            45555555555555555443