Psyllid ID: psy1232

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60-------
Protein Sequence
MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRKPA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccHHHHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLgenkystlrkpa
Flexible Loop (DISEMBL)
MRRLSLEIEKERVEYlekskhlqdqLRDLRTEIEVLkvgekqseldllheeqvrlgenkystlrkpa
Low Complexity Region (SEG)
MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRKPA
Disordered region (IsUnstruct)
*******************************************************************
Disordered Region (DISOPRED)
***************************D***********************************R***
Disordered Region (DISEMBL)
MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRKPA
Disordered Region (DISPRO)
**RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRL************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRRLSLEIEKExxxxxxxxxxxxxxxxxxxxxIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRKPA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	67	2.2.26 [Sep-21-2011]
Q63648	586	Merlin (Fragment) OS=Ratt	yes	N/A	0.985	0.112	0.582	8e-15
P35240	595	Merlin OS=Homo sapiens GN	no	N/A	0.970	0.109	0.590	1e-14
P59750	595	Merlin OS=Papio anubis GN	N/A	N/A	0.970	0.109	0.590	1e-14
P46662	596	Merlin OS=Mus musculus GN	yes	N/A	0.970	0.109	0.567	2e-13
Q24564	635	Moesin/ezrin/radixin homo	yes	N/A	0.970	0.102	0.492	8e-11

>sp|Q63648|MERL_RAT Merlin (Fragment) OS=Rattus norvegicus GN=Nf2 PE=1 SV=1

 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 56/67 (83%), Gaps = 1/67 (1%)

Query: 1   MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLG-ENK 59
           M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G  +K
Sbjct: 510 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHSEHSDSGTSSK 569

Query: 60  YSTLRKP 66
           ++T++KP
Sbjct: 570 HNTIKKP 576

Probable regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in tumor suppression by restricting proliferation and promoting apoptosis. Along with WWC1 can synergistically induce the phosphorylation of LATS1 and LATS2 and can probably function in the regulation of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway. May act as a membrane stabilizing protein. May inhibit PI3 kinase by binding to AGAP2 and impairing its stimulating activity. Suppresses cell proliferation and tumorigenesis by inhibiting the CUL4A-RBX1-DDB1-VprBP/DCAF1 E3 ubiquitin-protein ligase complex Plays a role in lens development and is required for complete fiber cell terminal differentiation, maintenance of cell polarity and separation of the lens vesicle from the corneal epithelium.
Rattus norvegicus (taxid: 10116)

>sp|P35240|MERL_HUMAN Merlin OS=Homo sapiens GN=NF2 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 56/66 (84%), Gaps = 1/66 (1%)

Query: 1   MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQV-RLGENK 59
           M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E   R G +K
Sbjct: 514 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGSSK 573

Query: 60  YSTLRK 65
           ++T++K
Sbjct: 574 HNTIKK 579

Probable regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in tumor suppression by restricting proliferation and promoting apoptosis. Along with WWC1 can synergistically induce the phosphorylation of LATS1 and LATS2 and can probably function in the regulation of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway. May act as a membrane stabilizing protein. May inhibit PI3 kinase by binding to AGAP2 and impairing its stimulating activity. Suppresses cell proliferation and tumorigenesis by inhibiting the CUL4A-RBX1-DDB1-VprBP/DCAF1 E3 ubiquitin-protein ligase complex.

Homo sapiens (taxid: 9606)

>sp|P59750|MERL_PAPAN Merlin OS=Papio anubis GN=NF2 PE=3 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 56/66 (84%), Gaps = 1/66 (1%)

Query: 1   MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQV-RLGENK 59
           M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E   R G +K
Sbjct: 514 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGSSK 573

Query: 60  YSTLRK 65
           ++T++K
Sbjct: 574 HNTIKK 579

Probable regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in tumor suppression by restricting proliferation and promoting apoptosis. Along with WWC1 can synergistically induce the phosphorylation of LATS1 and LATS2 and can probably function in the regulation of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway. May act as a membrane stabilizing protein. May inhibit PI3 kinase by binding to AGAP2 and impairing its stimulating activity. Suppresses cell proliferation and tumorigenesis by inhibiting the CUL4A-RBX1-DDB1-VprBP/DCAF1 E3 ubiquitin-protein ligase complex.

Papio anubis (taxid: 9555)

>sp|P46662|MERL_MOUSE Merlin OS=Mus musculus GN=Nf2 PE=1 SV=2

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 55/67 (82%), Gaps = 2/67 (2%)

Query: 1   MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLG--EN 58
           M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G   +
Sbjct: 514 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDVLHSESSDRGGPSS 573

Query: 59  KYSTLRK 65
           K++T++K
Sbjct: 574 KHNTIKK 580

Probable regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in tumor suppression by restricting proliferation and promoting apoptosis. Along with WWC1 can synergistically induce the phosphorylation of LATS1 and LATS2 and can probably function in the regulation of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway. May act as a membrane stabilizing protein. May inhibit PI3 kinase by binding to AGAP2 and impairing its stimulating activity. Suppresses cell proliferation and tumorigenesis by inhibiting the CUL4A-RBX1-DDB1-VprBP/DCAF1 E3 ubiquitin-protein ligase complex (By similarity). Plays a role in lens development and is required for complete fiber cell terminal differentiation, maintenance of cell polarity and separation of the lens vesicle from the corneal epithelium.

Mus musculus (taxid: 10090)

>sp|Q24564|MERH_DROME Moesin/ezrin/radixin homolog 2 OS=Drosophila melanogaster GN=Mer PE=1 SV=1

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 47/65 (72%)

Query: 1   MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKY 60
           M +++ E+E+  ++YL  SK +Q QL+ LR+EI   K+ E QS LD+L E Q++ GENKY
Sbjct: 555 MEQITNEMERNHLDYLRNSKQVQSQLQTLRSEIAPHKIEENQSNLDILSEAQIKAGENKY 614

Query: 61  STLRK 65
           STL+K
Sbjct: 615 STLKK 619

Regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. Mer acts synergistically along with Ex and Kibra to regulate the Hippo signaling pathway.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
328721873	619	PREDICTED: merlin-like [Acyrthosiphon pi	0.970	0.105	0.830	2e-22
345484366	643	PREDICTED: merlin-like [Nasonia vitripen	0.940	0.097	0.873	3e-22
340729719	641	PREDICTED: LOW QUALITY PROTEIN: merlin-l	0.940	0.098	0.857	1e-21
380017225	641	PREDICTED: LOW QUALITY PROTEIN: merlin-l	0.940	0.098	0.857	1e-21
383853948	641	PREDICTED: merlin [Megachile rotundata]	0.940	0.098	0.857	1e-21
350411405	641	PREDICTED: merlin-like [Bombus impatiens	0.940	0.098	0.857	1e-21
328778643	641	PREDICTED: merlin-like [Apis mellifera]	0.940	0.098	0.857	1e-21
307178403	605	Merlin [Camponotus floridanus]	0.940	0.104	0.873	2e-21
307200017	564	Merlin [Harpegnathos saltator]	0.940	0.111	0.841	3e-21
242013593	610	Merlin, putative [Pediculus humanus corp	0.970	0.106	0.815	3e-20

>gi|328721873|ref|XP_001949236.2| PREDICTED: merlin-like [Acyrthosiphon pisum]

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/65 (83%), Positives = 61/65 (93%)

Query: 1   MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKY 60
           M  L+LEIEKER++YLEKSKHLQDQLRDL+TEIEVLKV EKQ ELD+LH+EQVRLGENKY
Sbjct: 539 MEELTLEIEKERIQYLEKSKHLQDQLRDLKTEIEVLKVDEKQCELDMLHDEQVRLGENKY 598

Query: 61  STLRK 65
           STL+K
Sbjct: 599 STLKK 603

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345484366|ref|XP_001601599.2| PREDICTED: merlin-like [Nasonia vitripennis]

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/63 (87%), Positives = 60/63 (95%)

Query: 3   RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYST 62
           +LSLEIEKER++YLEKSKHLQ+QLRDLRTEI VLKVGEKQ ELD LHEEQVRLGENKYST
Sbjct: 565 QLSLEIEKERIDYLEKSKHLQEQLRDLRTEIAVLKVGEKQCELDQLHEEQVRLGENKYST 624

Query: 63  LRK 65
           L+K
Sbjct: 625 LKK 627

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729719|ref|XP_003403144.1| PREDICTED: LOW QUALITY PROTEIN: merlin-like [Bombus terrestris]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/63 (85%), Positives = 60/63 (95%)

Query: 3   RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYST 62
           +LSLEIEKERV+Y EKSKHLQ+QLR+LRTEIEV+KVGEKQ ELD LHEEQVRLGENKYST
Sbjct: 563 QLSLEIEKERVDYWEKSKHLQEQLRELRTEIEVMKVGEKQCELDQLHEEQVRLGENKYST 622

Query: 63  LRK 65
           L+K
Sbjct: 623 LKK 625

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017225|ref|XP_003692560.1| PREDICTED: LOW QUALITY PROTEIN: merlin-like [Apis florea]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/63 (85%), Positives = 60/63 (95%)

Query: 3   RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYST 62
           +LSLEIEKERV+Y EKSKHLQ+QLR+LRTEIEV+KVGEKQ ELD LHEEQVRLGENKYST
Sbjct: 563 QLSLEIEKERVDYWEKSKHLQEQLRELRTEIEVMKVGEKQCELDQLHEEQVRLGENKYST 622

Query: 63  LRK 65
           L+K
Sbjct: 623 LKK 625

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853948|ref|XP_003702484.1| PREDICTED: merlin [Megachile rotundata]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/63 (85%), Positives = 60/63 (95%)

Query: 3   RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYST 62
           +LSLEIEKERV+Y EKSKHLQ+QLR+LRTEIEV+KVGEKQ ELD LHEEQVRLGENKYST
Sbjct: 563 QLSLEIEKERVDYWEKSKHLQEQLRELRTEIEVMKVGEKQCELDQLHEEQVRLGENKYST 622

Query: 63  LRK 65
           L+K
Sbjct: 623 LKK 625

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411405|ref|XP_003489338.1| PREDICTED: merlin-like [Bombus impatiens]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/63 (85%), Positives = 60/63 (95%)

Query: 3   RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYST 62
           +LSLEIEKERV+Y EKSKHLQ+QLR+LRTEIEV+KVGEKQ ELD LHEEQVRLGENKYST
Sbjct: 563 QLSLEIEKERVDYWEKSKHLQEQLRELRTEIEVMKVGEKQCELDQLHEEQVRLGENKYST 622

Query: 63  LRK 65
           L+K
Sbjct: 623 LKK 625

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778643|ref|XP_003249526.1| PREDICTED: merlin-like [Apis mellifera]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/63 (85%), Positives = 60/63 (95%)

Query: 3   RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYST 62
           +LSLEIEKERV+Y EKSKHLQ+QLR+LRTEIEV+KVGEKQ ELD LHEEQVRLGENKYST
Sbjct: 563 QLSLEIEKERVDYWEKSKHLQEQLRELRTEIEVMKVGEKQCELDQLHEEQVRLGENKYST 622

Query: 63  LRK 65
           L+K
Sbjct: 623 LKK 625

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307178403|gb|EFN67134.1| Merlin [Camponotus floridanus]

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/63 (87%), Positives = 59/63 (93%)

Query: 3   RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYST 62
           +LSLEIEKER EY EKSK+LQ+QLRDLRTEIEVLKVGEKQ ELD LHEEQVRLGENKYST
Sbjct: 527 QLSLEIEKERTEYWEKSKNLQEQLRDLRTEIEVLKVGEKQCELDQLHEEQVRLGENKYST 586

Query: 63  LRK 65
           L+K
Sbjct: 587 LKK 589

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200017|gb|EFN80363.1| Merlin [Harpegnathos saltator]

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/63 (84%), Positives = 60/63 (95%)

Query: 3   RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYST 62
           +LSLEIEKERV+Y EKSKHLQ+QLR+LR+EIEV+KVGEKQ ELD LHEEQVRLGENKYST
Sbjct: 486 QLSLEIEKERVDYWEKSKHLQEQLRELRSEIEVMKVGEKQCELDQLHEEQVRLGENKYST 545

Query: 63  LRK 65
           L+K
Sbjct: 546 LKK 548

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013593|ref|XP_002427487.1| Merlin, putative [Pediculus humanus corporis] gi|212511882|gb|EEB14749.1| Merlin, putative [Pediculus humanus corporis]

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/65 (81%), Positives = 61/65 (93%)

Query: 1   MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKY 60
           +++LSLEIEKERVEYLEKSK +Q+QLRDLR+EIE LKVGEK +ELD LH+EQVRLGENKY
Sbjct: 530 VQQLSLEIEKERVEYLEKSKQVQEQLRDLRSEIEELKVGEKTTELDNLHDEQVRLGENKY 589

Query: 61  STLRK 65
           STLRK
Sbjct: 590 STLRK 594

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
UNIPROTKB|F1ND75	552	NF2 "Uncharacterized protein"	0.970	0.117	0.584	2e-16
UNIPROTKB|F1P1K6	558	NF2 "Uncharacterized protein"	0.970	0.116	0.584	2e-16
UNIPROTKB|F1P0P9	599	NF2 "Uncharacterized protein"	0.970	0.108	0.584	2.4e-16
UNIPROTKB|K7N7E1	403	NF2 "Uncharacterized protein"	0.985	0.163	0.573	5.2e-16
RGD|3169	586	Nf2 "neurofibromin 2 (merlin)"	0.985	0.112	0.582	7.8e-16
UNIPROTKB|E2RTM1	591	NF2 "Uncharacterized protein"	0.985	0.111	0.573	1.3e-15
UNIPROTKB|G3V717	591	Nf2 "Neurofibromatosis 2, isof	0.985	0.111	0.573	1.3e-15
UNIPROTKB|P35240	595	NF2 "Merlin" [Homo sapiens (ta	0.970	0.109	0.590	1.3e-15
ZFIN|ZDB-GENE-080722-7	593	nf2a "neurofibromin 2a (merlin	0.970	0.109	0.584	2.2e-15
UNIPROTKB|E2QZZ2	596	NF2 "Uncharacterized protein"	0.970	0.109	0.567	7.5e-15

UNIPROTKB|F1ND75 NF2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 212 (79.7 bits), Expect = 2.0e-16, P = 2.0e-16
 Identities = 38/65 (58%), Positives = 55/65 (84%)

Query:     1 MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKY 60
             M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G +K+
Sbjct:   478 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENASRGNSKH 537

Query:    61 STLRK 65
             +T++K
Sbjct:   538 NTIKK 542

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0008092 "cytoskeletal protein binding" evidence=IEA

GO:0019898 "extrinsic to membrane" evidence=IEA

UNIPROTKB|F1P1K6 NF2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 212 (79.7 bits), Expect = 2.0e-16, P = 2.0e-16
 Identities = 38/65 (58%), Positives = 55/65 (84%)

Query:     1 MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKY 60
             M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G +K+
Sbjct:   478 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENASRGNSKH 537

Query:    61 STLRK 65
             +T++K
Sbjct:   538 NTIKK 542

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0008092 "cytoskeletal protein binding" evidence=IEA

GO:0019898 "extrinsic to membrane" evidence=IEA

UNIPROTKB|F1P0P9 NF2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 212 (79.7 bits), Expect = 2.4e-16, P = 2.4e-16
 Identities = 38/65 (58%), Positives = 55/65 (84%)

Query:     1 MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKY 60
             M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G +K+
Sbjct:   519 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENASRGNSKH 578

Query:    61 STLRK 65
             +T++K
Sbjct:   579 NTIKK 583

GO:0008092 "cytoskeletal protein binding" evidence=IEA

GO:0019898 "extrinsic to membrane" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

GO:0006469 "negative regulation of protein kinase activity" evidence=IEA

GO:0007398 "ectoderm development" evidence=IEA

GO:0008156 "negative regulation of DNA replication" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0014010 "Schwann cell proliferation" evidence=IEA

GO:0022408 "negative regulation of cell-cell adhesion" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0035330 "regulation of hippo signaling cascade" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0042518 "negative regulation of tyrosine phosphorylation of Stat3 protein" evidence=IEA

GO:0042524 "negative regulation of tyrosine phosphorylation of Stat5 protein" evidence=IEA

GO:0043409 "negative regulation of MAPK cascade" evidence=IEA

GO:0045216 "cell-cell junction organization" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0051496 "positive regulation of stress fiber assembly" evidence=IEA

GO:0070306 "lens fiber cell differentiation" evidence=IEA

GO:0001707 "mesoderm formation" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|K7N7E1 NF2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 205 (77.2 bits), Expect = 5.2e-16, P = 5.2e-16
 Identities = 39/68 (57%), Positives = 56/68 (82%)

Query:     1 MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLG--EN 58
             M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G   +
Sbjct:   322 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGTSS 381

Query:    59 KYSTLRKP 66
             K++T++KP
Sbjct:   382 KHNTIKKP 389

GO:0019898 "extrinsic to membrane" evidence=IEA

GO:0008092 "cytoskeletal protein binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

RGD|3169 Nf2 "neurofibromin 2 (merlin)" [Rattus norvegicus (taxid:10116)]

 Score = 207 (77.9 bits), Expect = 7.8e-16, P = 7.8e-16
 Identities = 39/67 (58%), Positives = 56/67 (83%)

Query:     1 MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLG-ENK 59
             M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G  +K
Sbjct:   510 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHSEHSDSGTSSK 569

Query:    60 YSTLRKP 66
             ++T++KP
Sbjct:   570 HNTIKKP 576

GO:0001707 "mesoderm formation" evidence=ISO

GO:0001726 "ruffle" evidence=ISO

GO:0005178 "integrin binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005769 "early endosome" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005912 "adherens junction" evidence=ISO

GO:0006469 "negative regulation of protein kinase activity" evidence=ISO

GO:0007398 "ectoderm development" evidence=ISO

GO:0008013 "beta-catenin binding" evidence=IPI

GO:0008092 "cytoskeletal protein binding" evidence=IEA

GO:0008156 "negative regulation of DNA replication" evidence=ISO

GO:0008285 "negative regulation of cell proliferation" evidence=ISO

GO:0014010 "Schwann cell proliferation" evidence=ISO

GO:0019898 "extrinsic to membrane" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IPI

GO:0022408 "negative regulation of cell-cell adhesion" evidence=ISO

GO:0030027 "lamellipodium" evidence=ISO

GO:0030036 "actin cytoskeleton organization" evidence=ISO

GO:0030175 "filopodium" evidence=ISO

GO:0030308 "negative regulation of cell growth" evidence=NAS;IDA

GO:0030864 "cortical actin cytoskeleton" evidence=ISO

GO:0032154 "cleavage furrow" evidence=ISO

GO:0035330 "regulation of hippo signaling cascade" evidence=ISO

GO:0042127 "regulation of cell proliferation" evidence=ISO

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=ISO

GO:0042518 "negative regulation of tyrosine phosphorylation of Stat3 protein" evidence=ISO

GO:0042524 "negative regulation of tyrosine phosphorylation of Stat5 protein" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0043234 "protein complex" evidence=IDA

GO:0043409 "negative regulation of MAPK cascade" evidence=ISO

GO:0045121 "membrane raft" evidence=IDA

GO:0045202 "synapse" evidence=IDA

GO:0045216 "cell-cell junction organization" evidence=ISO

GO:0046426 "negative regulation of JAK-STAT cascade" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;IDA

GO:0051496 "positive regulation of stress fiber assembly" evidence=ISO

GO:0070306 "lens fiber cell differentiation" evidence=ISO

UNIPROTKB|E2RTM1 NF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 205 (77.2 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 39/68 (57%), Positives = 56/68 (82%)

Query:     1 MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLG--EN 58
             M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G   +
Sbjct:   514 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGTSS 573

Query:    59 KYSTLRKP 66
             K++T++KP
Sbjct:   574 KHNTIKKP 581

GO:0019898 "extrinsic to membrane" evidence=IEA

GO:0008092 "cytoskeletal protein binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|G3V717 Nf2 "Neurofibromatosis 2, isoform CRA_b" [Rattus norvegicus (taxid:10116)]

 Score = 205 (77.2 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 39/68 (57%), Positives = 56/68 (82%)

Query:     1 MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLG--EN 58
             M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G   +
Sbjct:   514 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHSEHSDRGGTSS 573

Query:    59 KYSTLRKP 66
             K++T++KP
Sbjct:   574 KHNTIKKP 581

GO:0001707 "mesoderm formation" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

GO:0006469 "negative regulation of protein kinase activity" evidence=IEA

GO:0007398 "ectoderm development" evidence=IEA

GO:0008092 "cytoskeletal protein binding" evidence=IEA

GO:0008156 "negative regulation of DNA replication" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0014010 "Schwann cell proliferation" evidence=IEA

GO:0019898 "extrinsic to membrane" evidence=IEA

GO:0022408 "negative regulation of cell-cell adhesion" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0035330 "regulation of hippo signaling cascade" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0042518 "negative regulation of tyrosine phosphorylation of Stat3 protein" evidence=IEA

GO:0042524 "negative regulation of tyrosine phosphorylation of Stat5 protein" evidence=IEA

GO:0043409 "negative regulation of MAPK cascade" evidence=IEA

GO:0045216 "cell-cell junction organization" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0051496 "positive regulation of stress fiber assembly" evidence=IEA

GO:0070306 "lens fiber cell differentiation" evidence=IEA

UNIPROTKB|P35240 NF2 "Merlin" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 39/66 (59%), Positives = 56/66 (84%)

Query:     1 MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQV-RLGENK 59
             M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E   R G +K
Sbjct:   514 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGSSK 573

Query:    60 YSTLRK 65
             ++T++K
Sbjct:   574 HNTIKK 579

GO:0008092 "cytoskeletal protein binding" evidence=IEA

GO:0019898 "extrinsic to membrane" evidence=IEA

GO:0001707 "mesoderm formation" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

GO:0006469 "negative regulation of protein kinase activity" evidence=IEA

GO:0007398 "ectoderm development" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0043409 "negative regulation of MAPK cascade" evidence=IEA

GO:0045216 "cell-cell junction organization" evidence=IEA

GO:0070306 "lens fiber cell differentiation" evidence=IEA

GO:0031527 "filopodium membrane" evidence=IEA

GO:0032587 "ruffle membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0008285 "negative regulation of cell proliferation" evidence=IMP;IDA

GO:0035330 "regulation of hippo signaling cascade" evidence=IMP

GO:0005856 "cytoskeleton" evidence=TAS

GO:0014010 "Schwann cell proliferation" evidence=IMP

GO:0005769 "early endosome" evidence=IDA

GO:0042524 "negative regulation of tyrosine phosphorylation of Stat5 protein" evidence=IDA

GO:0046426 "negative regulation of JAK-STAT cascade" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0030036 "actin cytoskeleton organization" evidence=IMP

GO:0001953 "negative regulation of cell-matrix adhesion" evidence=TAS

GO:0008156 "negative regulation of DNA replication" evidence=IMP

GO:0022408 "negative regulation of cell-cell adhesion" evidence=IDA

GO:0030336 "negative regulation of cell migration" evidence=TAS

GO:0042518 "negative regulation of tyrosine phosphorylation of Stat3 protein" evidence=IDA

GO:0051496 "positive regulation of stress fiber assembly" evidence=IMP

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

ZFIN|ZDB-GENE-080722-7 nf2a "neurofibromin 2a (merlin)" [Danio rerio (taxid:7955)]

 Score = 203 (76.5 bits), Expect = 2.2e-15, P = 2.2e-15
 Identities = 38/65 (58%), Positives = 52/65 (80%)

Query:     1 MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKY 60
             M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G +K 
Sbjct:   513 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIESLKLKERETPLDILHNENTEKGTSKQ 572

Query:    61 STLRK 65
             S  +K
Sbjct:   573 SNFKK 577

GO:0019898 "extrinsic to membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0008092 "cytoskeletal protein binding" evidence=IEA

UNIPROTKB|E2QZZ2 NF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 198 (74.8 bits), Expect = 7.5e-15, P = 7.5e-15
 Identities = 38/67 (56%), Positives = 55/67 (82%)

Query:     1 MRRLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLG--EN 58
             M+RLS+EIEKE+VEY+EKSKHLQ+QL +L+TEIE LK+ E+++ LD+LH E    G   +
Sbjct:   514 MKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGTSS 573

Query:    59 KYSTLRK 65
             K++T++K
Sbjct:   574 KHNTIKK 580

GO:0070306 "lens fiber cell differentiation" evidence=IEA

GO:0051496 "positive regulation of stress fiber assembly" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0045216 "cell-cell junction organization" evidence=IEA

GO:0043409 "negative regulation of MAPK cascade" evidence=IEA

GO:0042524 "negative regulation of tyrosine phosphorylation of Stat5 protein" evidence=IEA

GO:0042518 "negative regulation of tyrosine phosphorylation of Stat3 protein" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0035330 "regulation of hippo signaling cascade" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0022408 "negative regulation of cell-cell adhesion" evidence=IEA

GO:0014010 "Schwann cell proliferation" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0008156 "negative regulation of DNA replication" evidence=IEA

GO:0007398 "ectoderm development" evidence=IEA

GO:0006469 "negative regulation of protein kinase activity" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0001707 "mesoderm formation" evidence=IEA

GO:0019898 "extrinsic to membrane" evidence=IEA

GO:0008092 "cytoskeletal protein binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q63648	MERL_RAT	No assigned EC number	0.5820	0.9850	0.1126	yes	N/A
P46662	MERL_MOUSE	No assigned EC number	0.5671	0.9701	0.1090	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	67
pfam00769	244	pfam00769, ERM, Ezrin/radixin/moesin family	9e-07

>gnl|CDD|216108 pfam00769, ERM, Ezrin/radixin/moesin family

 Score = 43.2 bits (102), Expect = 9e-07
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 9   EKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRK 65
           E+ERV Y EK++ LQ QL+ L++E+   +   K++  D+LHEE VR G +KY TLR+
Sbjct: 172 EEERVTYAEKNERLQTQLQALKSELAAARDESKETANDILHEENVRAGRDKYKTLRQ 228

This family of proteins contain a band 4.1 domain (pfam00373), at their amino terminus. This family represents the rest of these proteins. Length = 244

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	67
PF00769	246	ERM: Ezrin/radixin/moesin family; InterPro: IPR011	99.93
KOG3529|consensus	596		99.43
KOG3436|consensus	123		84.39

>PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin []

Probab=99.93  E-value=4.2e-27  Score=167.01  Aligned_cols=58  Identities=55%  Similarity=0.866  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHcccchhhhhccC
Q psy1232           9 EKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRKP   66 (67)
Q Consensus         9 E~eR~~~~eksk~Lq~qL~~L~~El~~lk~e~k~t~~D~lH~eNvr~G~dKykTLr~i   66 (67)
                      |++|++|++||++||+||++|++||+++||++|+|++|+||++||++|+|||+|||+|
T Consensus       174 EeeR~t~~EKnk~lq~QL~~L~~EL~~~kde~k~T~~D~~h~en~~~g~~ky~tl~~i  231 (246)
T PF00769_consen  174 EEERVTYAEKNKRLQEQLKELKSELEQLKDEEKQTQLDIIHAENVRAGRDKYKTLRQI  231 (246)
T ss_dssp             GGC---HHHH-HHHHHHHHHHHHHHHTTB-CCG--HHHHHHHHHHHTT--HHHHHHHH
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHHHhchhHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999999987

Ezrin was first identified as a constituent of microvilli [], radixin as a barbed, end-capping actin-modulating protein from isolated junctional fractions [], and moesin as a heparin binding protein []. A tumour suppressor molecule responsible for neurofibromatosis type 2 (NF2) is highly similar to ERM proteins and has been designated merlin (moesin-ezrin-radixin-like protein). ERM molecules contain 3 domains, an N-terminal globular domain; an extended alpha-helical domain; and a charged C-terminal domain []. Ezrin, radixin and merlin also contain a polyproline region between the helical and C-terminal domains. The N-terminal domain is highly conserved, and is also found in merlin, band 4.1 proteins and members of the band 4.1 superfamily. ERM proteins crosslink actin filaments with plasma membranes. They co-localise with CD44 at actin filament-plasma membrane interaction sites, associating with CD44 via their N-terminal domains and with actin filaments via their C-terminal domains [].; GO: 0008092 cytoskeletal protein binding, 0005737 cytoplasm, 0019898 extrinsic to membrane; PDB: 2I1J_A 2I1K_A 1E5W_A 1EF1_C.

>KOG3529|consensus

Probab=99.43  E-value=3.3e-14  Score=111.95  Aligned_cols=64  Identities=42%  Similarity=0.580  Sum_probs=61.2

Q ss_pred             hhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHcccchhhhhccC
Q psy1232           3 RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRKP   66 (67)
Q Consensus         3 ~ls~eiE~eR~~~~eksk~Lq~qL~~L~~El~~lk~e~k~t~~D~lH~eNvr~G~dKykTLr~i   66 (67)
                      ....++|++|++|.+||.++++||.+|+.+++.+|++++++.+|++|++|+++|+|||+|||+|
T Consensus       518 ~~~~~~eker~te~ek~~~~k~qL~aL~~e~~~~k~~~~~t~~d~~h~~n~r~G~dk~~tLr~i  581 (596)
T KOG3529|consen  518 LGLPRLEKERVTEAEKNERVRDQLDALRSELAPAKDEERPTAHDILHAENVRAGRDKYKTLRQS  581 (596)
T ss_pred             ccccchhHHHHHHHhhhHHHHHHHHhcccccccCCCcccccccchhhhhhcccCCCcceehhhh
Confidence            3457899999999999999999999999999999999999999999999999999999999987

>KOG3436|consensus

Probab=84.39  E-value=1.2  Score=29.69  Aligned_cols=23  Identities=35%  Similarity=0.580  Sum_probs=20.1

Q ss_pred             HhHHHHHHHHHHHHHHHHhhhhh
Q psy1232          18 KSKHLQDQLRDLRTEIEVLKVGE   40 (67)
Q Consensus        18 ksk~Lq~qL~~L~~El~~lk~e~   40 (67)
                      +-+.|+.||.+|+.||++||+..
T Consensus        13 ~ke~L~~ql~dLK~ELa~LRv~K   35 (123)
T KOG3436|consen   13 SKEQLLKQLDDLKVELAQLRVAK   35 (123)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            33799999999999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	67
1ef1_C	90	Moesin; membrane, FERM domain, tail domain, membra	2e-13
2i1j_A	575	Moesin; FERM, coiled-coil, C-ermad, ERM, radixin,	9e-11

>1ef1_C Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.137.5.1 Length = 90

 Score = 58.1 bits (140), Expect = 2e-13
 Identities = 21/59 (35%), Positives = 36/59 (61%)

Query: 7  EIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRK 65
            E+ER    EK++ +Q  L+ L +E+   +   K++  D++H E +RLG +KY TLR+
Sbjct: 16 RSEEERTTEAEKNERVQKHLKALTSELANARDESKKTANDMIHAENMRLGRDKYKTLRQ 74

>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A Length = 575

 Score = 54.2 bits (129), Expect = 9e-11
 Identities = 18/63 (28%), Positives = 35/63 (55%)

Query: 3   RLSLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYST 62
              ++   +R    E+++ L +QL+ L+ ++       K++ +D +H E VR G +KY T
Sbjct: 497 DDLVDPVADRRTLAERNERLHNQLKALKQDLARSCDETKETAMDKIHRENVRQGRDKYKT 556

Query: 63  LRK 65
           LR+
Sbjct: 557 LRE 559

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	67
1ef1_C	90	Moesin; membrane, FERM domain, tail domain, membra	99.94
2i1j_A	575	Moesin; FERM, coiled-coil, C-ermad, ERM, radixin,	99.9

>1ef1_C Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.137.5.1

Probab=99.94  E-value=1.1e-28  Score=154.65  Aligned_cols=61  Identities=34%  Similarity=0.535  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHcccchhhhhccC
Q psy1232           6 LEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRKP   66 (67)
Q Consensus         6 ~eiE~eR~~~~eksk~Lq~qL~~L~~El~~lk~e~k~t~~D~lH~eNvr~G~dKykTLr~i   66 (67)
                      .+||++|++|++||++||+||++|++||+++|+++|+|++|+||++||++|+|||+|||+|
T Consensus        15 ~~~E~eR~~~~eKsk~lq~QL~~Lk~ELe~lk~~~k~t~~D~lh~eN~~~G~dKykTLr~i   75 (90)
T 1ef1_C           15 DRSEEERTTEAEKNERVQKHLKALTSELANARDESKKTANDMIHAENMRLGRDKYKTLRQI   75 (90)
T ss_dssp             TTGGGGCCCHHHHCHHHHHHHHHHHHHHHTTBCTTCCCHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             CchHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHhcchhHHHHHHHH
Confidence            3689999999999999999999999999999999999999999999999999999999987

>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A

Probab=99.90  E-value=5.9e-25  Score=168.51  Aligned_cols=61  Identities=30%  Similarity=0.494  Sum_probs=59.1

Q ss_pred             hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHcccchhhhhccC
Q psy1232           5 SLEIEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRKP   66 (67)
Q Consensus         5 s~eiE~eR~~~~eksk~Lq~qL~~L~~El~~lk~e~k~t~~D~lH~eNvr~G~dKykTLr~i   66 (67)
                      +.++ ++|++|++||++||+||++|++||+++||++|+|++|+||++||++|+|||+|||+|
T Consensus       500 ~~~~-~eR~~~~ekn~~lq~qL~~L~~el~~~r~~~k~t~~D~lh~en~~~GrdKykTLr~i  560 (575)
T 2i1j_A          500 VDPV-ADRRTLAERNERLHNQLKALKQDLARSCDETKETAMDKIHRENVRQGRDKYKTLREI  560 (575)
T ss_dssp             CCGG-GGCCCHHHHCHHHHHHHHHHHHHHHTTBCGGGCCHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             ccch-HHHHHHHHhhHHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCchHHHHHHHH
Confidence            5678 899999999999999999999999999999999999999999999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	67
d1ef1c_	90	a.137.5.1 (C:) Moesin tail domain {Human (Homo sap	1e-15

>d1ef1c_ a.137.5.1 (C:) Moesin tail domain {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Moesin tail domain
family: Moesin tail domain
domain: Moesin tail domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (153), Expect = 1e-15
 Identities = 21/58 (36%), Positives = 36/58 (62%)

Query: 8  IEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRK 65
           E+ER    EK++ +Q  L+ L +E+   +   K++  D++H E +RLG +KY TLR+
Sbjct: 17 SEEERTTEAEKNERVQKHLKALTSELANARDESKKTANDMIHAENMRLGRDKYKTLRQ 74

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	67
d1ef1c_	90	Moesin tail domain {Human (Homo sapiens) [TaxId: 9	99.95

>d1ef1c_ a.137.5.1 (C:) Moesin tail domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Moesin tail domain
family: Moesin tail domain
domain: Moesin tail domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.6e-29  Score=156.16  Aligned_cols=59  Identities=36%  Similarity=0.574  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhHHHhHHHHHHcccchhhhhccC
Q psy1232           8 IEKERVEYLEKSKHLQDQLRDLRTEIEVLKVGEKQSELDLLHEEQVRLGENKYSTLRKP   66 (67)
Q Consensus         8 iE~eR~~~~eksk~Lq~qL~~L~~El~~lk~e~k~t~~D~lH~eNvr~G~dKykTLr~i   66 (67)
                      +|++|++|++||++||+||++|++||+++||++|+|++|+||++||++|+|||+|||+|
T Consensus        17 ~E~eR~~~~ek~k~lq~qL~~L~~EL~~~kd~~K~T~~D~iH~eNvr~GrdKYkTLrqI   75 (90)
T d1ef1c_          17 SEEERTTEAEKNERVQKHLKALTSELANARDESKKTANDMIHAENMRLGRDKYKTLRQI   75 (90)
T ss_dssp             GGGGCCCHHHHCHHHHHHHHHHHHHHHTTBCTTCCCHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             cHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcccccChHHHHHHHHHHhhhhHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999997