Psyllid ID: psy12378


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
MAEGYVIFDIKIGEGQYNWKGKYFVVPQQGLGIFTSETFLDTKTENQNKAHENLWFVWFFDRGGDDNEGDYQKDIHNSSPQIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYFRFDIVDVVGTVVDRNRAICVQPFLMAEGYVIFDIKIGEGQYNWKGKYFVETPATATERIYFETDAVHERYPEEIKITWDKYNLTSNLNTPVSISLKE
ccccEEEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHcEEEEEccccccccccccccccccccccEEEEEEEcccccEEEEEEEEEEEEEEEccccccccccccccccccccccccccEEEEEcccccccccccccccccccEEEEEEEEEEEEEEEEccccEEEEcccEEEccEEEEEEEEccccccEEEEEEEEccccccEEEEEccccccccccccEEEEEEEccccccccccEEEEEcc
cccEEEEEEEEEccccccccccEEEEccccEEEEEccccccccHHHHHHHHHHHHEEEEEcccccccccccHHHHHcccHHHHHcccccccEEEEEEEEEEEccccEEEEcccccccccccccccccccccccccEHHEEHcccEEEEEcccccccccccEEEEEEEEEEEEEEEcccEEEEEccEEEEEEEEEEEEEEcccccccccEEEEEcccccccEEEEcccHHHcccccHEEEEEccccccccccccEEEEEcc
MAEGYVIFDIKigegqynwkgkyfvvpqqglgiftsetfldtKTENQNKAHENLWFVWFFdrggddnegdyqkdihnsspqihknfnfqlpffgfrfnytrvsrhgylefsdppdhftyplsfpnkdwpkkndpsfigifyskcrigsirttdidqrtpgvyfrfdIVDVVGtvvdrnraicvqpflmaegYVIFDIKigegqynwkgkyfvetpatateriyfetdavherypeeIKITWDkynltsnlntpvsislke
MAEGYVIFDIKIGEGQYNWKGKYFVVPQQGLGIFTSETFLDTKTENQNKAHENLWFVWFFDRGGDDNEGDYQKDIHNSSPQIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKcrigsirttdidqrtpgvyFRFDIVDVVGTVVDRNRAICVQPFLMAEGYVIFDIKIGEGQYNWKGKYFVETPATATERIYFETDAVHERYPEEIKitwdkynltsnlntpvsislke
MAEGYVIFDIKIGEGQYNWKGKYFVVPQQGLGIFTSETFLDTKTENQNKAHENLWFVWFFDRGGDDNEGDYQKDIHNSSPQIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYFRFDIVDVVGTVVDRNRAICVQPFLMAEGYVIFDIKIGEGQYNWKGKYFVETPATATERIYFETDAVHERYPEEIKITWDKYNLTSNLNTPVSISLKE
***GYVIFDIKIGEGQYNWKGKYFVVPQQGLGIFTSETFLDTKTENQNKAHENLWFVWFFDRGG****************QIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYFRFDIVDVVGTVVDRNRAICVQPFLMAEGYVIFDIKIGEGQYNWKGKYFVETPATATERIYFETDAVHERYPEEIKITWDKYNLTSNL**********
***GYVIFDIKIGEGQYNWK****************ETFLDTKTENQNKAHENLWFVWFFDRGGDDNEG***********QIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYFRFDIVDVVGTVVDRNRAICVQPFLMAEGYVIFDIKIGEGQYNWKGKYFVETPATATERIYFETDAVHERYPEEIKITWDKYNLTSNLNTPVSISL**
MAEGYVIFDIKIGEGQYNWKGKYFVVPQQGLGIFTSETFLDTKTENQNKAHENLWFVWFFDRGGDDNEGDYQKDIHNSSPQIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYFRFDIVDVVGTVVDRNRAICVQPFLMAEGYVIFDIKIGEGQYNWKGKYFVETPATATERIYFETDAVHERYPEEIKITWDKYNLTSNLNTPVSISLKE
*AEGYVIFDIKIGEGQYNWKGKYFVVPQQGLGIFTSETFLDTKTENQNKAHENLWFVWFFDRGGDDNEGDYQKDIHNSSPQIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYFRFDIVDVVGTVVDRNRAICVQPFLMAEGYVIFDIKIGEGQYNWKGKYFVETPATATERIYFETDAVHERYPEEIKITWDKYNLTSNLNTPVSISLK*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAEGYVIFDIKIGEGQYNWKGKYFVVPQQGLGIFTSETFLDTKTENQNKAHENLWFVWFFDRGGDDNEGDYQKDIHNSSPQIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYFRFDIVDVVGTVVDRNRAICVQPFLMAEGYVIFDIKIGEGQYNWKGKYFVETPATATERIYFETDAVHERYPEEIKITWDKYNLTSNLNTPVSISLKE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query260 2.2.26 [Sep-21-2011]
Q0KHY3 1431 Extracellular domains-con yes N/A 0.438 0.079 0.669 2e-41
P34501 1385 Uncharacterized protein K yes N/A 0.303 0.057 0.428 2e-09
>sp|Q0KHY3|Y1004_DROME Extracellular domains-containing protein CG31004 OS=Drosophila melanogaster GN=CG31004 PE=1 SV=1 Back     alignment and function desciption
 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/115 (66%), Positives = 92/115 (80%), Gaps = 1/115 (0%)

Query: 58  WFFDRGGDDNEGDYQKDIHNSSPQIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHF 117
           W+FD+      GDYQ DIH S  Q+HKN NFQLPF+GFRFNYTR+S +GYLEFSDPP++ 
Sbjct: 168 WYFDKDMYGGRGDYQFDIHASMTQLHKNLNFQLPFYGFRFNYTRLSLNGYLEFSDPPEYL 227

Query: 118 TYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYFRFDIVDVVG 172
           TYPL FP KDWP K DPSF+GIF+SKCR+G I  +DIDQRTPGVYFR +  D++G
Sbjct: 228 TYPLVFPIKDWPAKRDPSFMGIFFSKCRVGRIYPSDIDQRTPGVYFRVE-RDLMG 281





Drosophila melanogaster (taxid: 7227)
>sp|P34501|YMS5_CAEEL Uncharacterized protein K03H1.5 OS=Caenorhabditis elegans GN=K03H1.5 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query260
380020283 1377 PREDICTED: extracellular domains-contain 0.465 0.087 0.747 3e-49
328788914 1265 PREDICTED: extracellular domains-contain 0.465 0.095 0.731 2e-48
350417175 1267 PREDICTED: extracellular domains-contain 0.465 0.095 0.715 6e-48
340715043 1267 PREDICTED: extracellular domains-contain 0.465 0.095 0.723 8e-48
242006815 1461 sushi domain containing protein, putativ 0.419 0.074 0.779 6e-47
157109933 1405 hypothetical protein AaeL_AAEL005432 [Ae 0.415 0.076 0.777 6e-46
357623997 1477 hypothetical protein KGM_05469 [Danaus p 0.511 0.090 0.606 6e-46
157109935 1427 hypothetical protein AaeL_AAEL005432 [Ae 0.415 0.075 0.777 6e-46
170064239 1271 conserved hypothetical protein [Culex qu 0.415 0.084 0.768 5e-45
345482776 1358 PREDICTED: extracellular domains-contain 0.473 0.090 0.685 5e-45
>gi|380020283|ref|XP_003694019.1| PREDICTED: extracellular domains-containing protein CG31004-like [Apis florea] Back     alignment and taxonomy information
 Score =  201 bits (510), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 92/123 (74%), Positives = 104/123 (84%)

Query: 44  TENQNKAHENLWFVWFFDRGGDDNEGDYQKDIHNSSPQIHKNFNFQLPFFGFRFNYTRVS 103
           TE + K   + +  WFFD+GGD+NEGDYQK+I  S+PQ HKNFNFQLPFFGFRFNYTRVS
Sbjct: 136 TETRLKEIRSKFMYWFFDKGGDNNEGDYQKEIQASTPQTHKNFNFQLPFFGFRFNYTRVS 195

Query: 104 RHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYF 163
            +G+LEFSDPP H+TYPL FP KDWPKKNDPSFIGIF+SKCRIG IR TDIDQR PGVYF
Sbjct: 196 MNGFLEFSDPPVHYTYPLVFPVKDWPKKNDPSFIGIFFSKCRIGEIRPTDIDQRKPGVYF 255

Query: 164 RFD 166
           R +
Sbjct: 256 RME 258




Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788914|ref|XP_392408.3| PREDICTED: extracellular domains-containing protein CG31004-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|350417175|ref|XP_003491293.1| PREDICTED: extracellular domains-containing protein CG31004-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340715043|ref|XP_003396030.1| PREDICTED: extracellular domains-containing protein CG31004-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|242006815|ref|XP_002424240.1| sushi domain containing protein, putative [Pediculus humanus corporis] gi|212507609|gb|EEB11502.1| sushi domain containing protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|157109933|ref|XP_001650885.1| hypothetical protein AaeL_AAEL005432 [Aedes aegypti] gi|108878860|gb|EAT43085.1| AAEL005432-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|357623997|gb|EHJ74925.1| hypothetical protein KGM_05469 [Danaus plexippus] Back     alignment and taxonomy information
>gi|157109935|ref|XP_001650886.1| hypothetical protein AaeL_AAEL005432 [Aedes aegypti] gi|108878861|gb|EAT43086.1| AAEL005432-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|170064239|ref|XP_001867442.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167881704|gb|EDS45087.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|345482776|ref|XP_001600000.2| PREDICTED: extracellular domains-containing protein CG31004-like [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query260
FB|FBgn0051004 1431 mesh "mesh" [Drosophila melano 0.630 0.114 0.514 1.7e-71
WB|WBGene00010540 1385 K03H1.5 [Caenorhabditis elegan 0.288 0.054 0.45 7.9e-14
FB|FBgn0051004 mesh "mesh" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 440 (159.9 bits), Expect = 1.7e-71, Sum P(2) = 1.7e-71
 Identities = 88/171 (51%), Positives = 109/171 (63%)

Query:     7 IFDIKIGEGQYNWKGKYFVVPQQGLGIFTSETFLDTKTENQNKAHENLWFVWFFDRGGDD 66
             ++D+    G YNW     V P       T+            +   N  + W+FD+    
Sbjct:   122 LYDVD-NSG-YNWDPNNNVAPPTTYS--TAAGGYTITAARLAELRSNFMY-WYFDKDMYG 176

Query:    67 NEGDYQKDIHNSSPQIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNK 126
               GDYQ DIH S  Q+HKN NFQLPF+GFRFNYTR+S +GYLEFSDPP++ TYPL FP K
Sbjct:   177 GRGDYQFDIHASMTQLHKNLNFQLPFYGFRFNYTRLSLNGYLEFSDPPEYLTYPLVFPIK 236

Query:   127 DWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYFRFDIVDVVGTVVDR 177
             DWP K DPSF+GIF+SKCR+G I  +DIDQRTPGVYFR +  D++G   DR
Sbjct:   237 DWPAKRDPSFMGIFFSKCRVGRIYPSDIDQRTPGVYFRVER-DLMGRT-DR 285


GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
GO:0007160 "cell-matrix adhesion" evidence=IEA
GO:0019991 "septate junction assembly" evidence=IMP
GO:0005920 "smooth septate junction" evidence=IDA
GO:0007156 "homophilic cell adhesion" evidence=IMP
GO:0061028 "establishment of endothelial barrier" evidence=IMP
WB|WBGene00010540 K03H1.5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0KHY3Y1004_DROMENo assigned EC number0.66950.43840.0796yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 260
KOG4291|consensus 1043 99.67
KOG4291|consensus 1043 97.51
>KOG4291|consensus Back     alignment and domain information
Probab=99.67  E-value=7.8e-17  Score=167.43  Aligned_cols=233  Identities=20%  Similarity=0.136  Sum_probs=198.1

Q ss_pred             EEEEEEeccceecccCCccccCCCCCcceeccccccccchhHHHh-ccccceEEEEecCCCCCCCCcccccccCccceec
Q psy12378          6 VIFDIKIGEGQYNWKGKYFVVPQQGLGIFTSETFLDTKTENQNKA-HENLWFVWFFDRGGDDNEGDYQKDIHNSSPQIHK   84 (260)
Q Consensus         6 ~~~~~~~~d~~YNW~~~~~~~~P~~~p~~~~e~~~y~~~~~~l~~-~r~~~my~~~d~~g~~~~gdy~~~i~~s~~q~~~   84 (260)
                      |.+|-+.-+..++||.++.+..|-....+   ...+.|+-.+|.. .+...++|++.....-+-.++..+++.++.+.++
T Consensus        83 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~L~~~~t~~~~p~~~~~~~~~~~~~~~~~a~~s~~~lk~  159 (1043)
T KOG4291|consen   83 VLVDPEDVQAGGTIDENNQVHCPFYGGLS---NYGTPIIVSFLNFLVTFPAAPTWLPDPPYTGDDREEFDAMISSYKLKQ  159 (1043)
T ss_pred             EEecHHHccccceecCCCccccceeeecc---ccceEeeeeeecceeecccCceeecCCCCCCCccccchhhhhHHHHhc
Confidence            45555555778888887777766555333   3467888888887 7999999999999999999999999999999888


Q ss_pred             ceeEeccccceeeeeEEEeeceeeeccCCCCCCcCCccCCCCCCCCcCCCceEEeeeeeecccccccCCCCCCCCceEEE
Q psy12378         85 NFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDIDQRTPGVYFR  164 (260)
Q Consensus        85 ~l~f~~PFyGfryNYT~lS~NGYl~Fsd~~~~~t~P~~fp~~dWP~~~DPsfIa~flsk~ri~~~~~~d~~~r~~GVyyR  164 (260)
                      .+.  .+|||+++ +|..+.|+++     .+...+|-+|+...||...|+||+|||++|++          ++.|||+||
T Consensus       160 ~ip--~~f~~v~~-~~vy~~~~g~-----~~~~~~~s~~~~~~~~~~~~~~f~~~f~~~~~----------~~~pG~i~~  221 (1043)
T KOG4291|consen  160 GIP--VFFFGVDR-DTVYLRNNGL-----QEVGGPPSQFNTNSGSYTYSTAFFAPFWSKVC----------PGTPGVIYY  221 (1043)
T ss_pred             CCc--cccccccc-ceEEEecCcc-----hhhcCcCCcccccCCccccCcccccccccccc----------CCCCceEEe
Confidence            777  78999999 8888888876     45566778899999999999999999999999          478999999


Q ss_pred             -EE------------------------------E----------------------------------------------
Q psy12378        165 -FD------------------------------I----------------------------------------------  167 (260)
Q Consensus       165 -l~------------------------------i----------------------------------------------  167 (260)
                       -+                              |                                              
T Consensus       222 ~~d~~~~~~l~~~~~dire~~~~a~tF~a~~a~IvTW~~a~~~~~~s~~~~~nTfQ~vlvsD~~~Tfa~F~y~~l~wts~  301 (1043)
T KOG4291|consen  222 RCDSDDDGVLDRITRDIREGVAGAATFRAFHALIVTWYRAASFRGNSDAENPNTFQAVLVSDRIYTFAIFNYYYLNWTSG  301 (1043)
T ss_pred             ecccccHHHHHHHHHHHHHhhccccccCcceEEEEEhhhhhhhccccccCCCCcceeEEEecCcceeEEEeecCcccCCC
Confidence             43                              0                                              


Q ss_pred             --------------------------------------------------------------------------------
Q psy12378        168 --------------------------------------------------------------------------------  167 (260)
Q Consensus       168 --------------------------------------------------------------------------------  167 (260)
                                                                                                      
T Consensus       302 ~~~~~g~~~~g~~~~~~qagfn~G~~t~~~~~P~s~t~~i~~~~sg~~v~~PGr~~frvd~~~~~~~c~~~~g~~~~~~~  381 (1043)
T KOG4291|consen  302 AVEFGGDGRAGRCGVSAQAGFNAGNGTVDFSLPYSQTPNILALRSGTNVGDPGRWMFRVDEVVRSAGCTNDIGGTYPMTC  381 (1043)
T ss_pred             cccccCCCcccceeeEEeeeecCCCccccccccCCCCceeEeccccccccCCcccceecCCeecccccccCcCCccceee
Confidence                                                                                            


Q ss_pred             ---------------------------------eeeeeeeeeeccceeecceeeeeeeEEEEEEecCcccceeeEEEEeC
Q psy12378        168 ---------------------------------VDVVGTVVDRNRAICVQPFLMAEGYVIFDIKIGEGQYNWKGKYFVET  214 (260)
Q Consensus       168 ---------------------------------~~v~g~~vd~nRA~CiqPf~~~~Gyv~f~isidg~~y~WkGkyyVet  214 (260)
                                                       +....+.++++|++|+||.+++.|+..|+....++.+.|.|++|+++
T Consensus       382 ~p~~~n~~~g~~v~d~~~C~~~~~a~~~~~e~~~~~~ct~~~~~~~~~~~~~~~~~g~~~~~~~~~~q~~~~~G~~~~~~  461 (1043)
T KOG4291|consen  382 APVCGNMLGGRTVNDCRICLDPICAVICGFEQREVATCTDVVRCRARCEQPALTDWGTKARQSDGGNQCFCFRGYIYDVP  461 (1043)
T ss_pred             cCCCCcccCCccccccccccCccccceecccccCCceeEecccceeeeccccccccccceeecCCcccceeccCcccccC
Confidence                                             23336779999999999999999999999555577999999999999


Q ss_pred             cccceeeEEeeccccccCC-------ccceeEEeeccc-------ccccCCCceEEEec
Q psy12378        215 PATATERIYFETDAVHERY-------PEEIKITWDKYN-------LTSNLNTPVSISLK  259 (260)
Q Consensus       215 PatA~e~I~f~dd~~he~~-------P~EI~ItW~~~N-------LT~N~nA~VqISL~  259 (260)
                      |+.+..++.+.++.++.++       ++++.++|+..|       +|.+.+|+|.||+-
T Consensus       462 ~~~~~~~~~~~ns~~~~~n~~~~~~~~~~~~~~~~~~~~~r~~~~v~~~~~~~~~~~~~  520 (1043)
T KOG4291|consen  462 PECEPVSECKTNSDACKKNGRWYCRNFEGFSITWQGDNQVRMFDDVTYGTQARIMISLY  520 (1043)
T ss_pred             cccccccccccchhhccCCceecccccccccccccccccccccccccccccceeEeeec
Confidence            9999999999888777777       999999999999       79999999999974



>KOG4291|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query260
d2cxka182 Calmodulin binding transcription activator 1 {Huma 84.29
>d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: Calmodulin binding transcription activator 1
species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.29  E-value=0.53  Score=31.97  Aligned_cols=34  Identities=15%  Similarity=0.294  Sum_probs=29.4

Q ss_pred             eeeeeeeeeccceeecceeeeeeeEEEEEEecCcc
Q psy12378        169 DVVGTVVDRNRAICVQPFLMAEGYVIFDIKIGEGQ  203 (260)
Q Consensus       169 ~v~g~~vd~nRA~CiqPf~~~~Gyv~f~isidg~~  203 (260)
                      .+-+++++.+..+|+.|- ++.|.|.++|+.|++.
T Consensus        39 ~~~~~~vs~~~i~C~tP~-~~~G~v~v~Vs~ng~~   72 (82)
T d2cxka1          39 SVPASLIQPGVLRCYCPA-HDTGLVTLQVAFNNQI   72 (82)
T ss_dssp             EEECEEEETTEEEEECCC-CCSEEEEEEEEETTEE
T ss_pred             ecceEEEeeeEEEEEcCc-ccceeEEEEEEECCEE
Confidence            456788999999999995 7799999999998864