Psyllid ID: psy12386


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-
MMFCEASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPVALTYYIFFQAVVMCVLFGNFYYQTYTKKHNKQAKATE
ccEEHHHHHHHHHHHHHHHHHHHHHEEcccccEEEEHHHHHHHHHHHHHHHcEEEcccccHHHHHccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcc
cHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEHccHHHHHHEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
MMFCEASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPVALTYYIFFQAVVMCVLFGNFYYQTYTKKHNKQAKATE
MMFCEASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPVALTYYIFFQAVVMCVLFGNFYYQTYTKKHNKQAKATE
MMFCEASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPVALTYYIFFQAVVMCVLFGNFYYQTYTKKHNKQAKATE
**FCEASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPVALTYYIFFQAVVMCVLFGNFYYQTYT***********
MMFCEASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPVALTYYIFFQAVVMCVLFGNFYY***************
MMFCEASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPVALTYYIFFQAVVMCVLFGNFYYQTYT***********
MMFCEASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPVALTYYIFFQAVVMCVLFGNFYYQTYTKK*********
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MMFCEASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPVALTYYIFFQAVVMCVLFGNFYYQTYTKKHNKQAKATE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query161 2.2.26 [Sep-21-2011]
A0JNC4281 Elongation of very long c yes N/A 0.925 0.530 0.503 5e-33
Q9D2Y9281 Elongation of very long c yes N/A 0.950 0.544 0.496 1e-32
A1L3X0281 Elongation of very long c yes N/A 0.645 0.370 0.634 6e-32
Q9JLJ4292 Elongation of very long c no N/A 0.919 0.506 0.483 9e-32
Q9NXB9296 Elongation of very long c no N/A 0.919 0.5 0.483 1e-31
Q9GZR5314 Elongation of very long c no N/A 0.975 0.5 0.420 1e-31
D4ADY9281 Elongation of very long c no N/A 0.950 0.544 0.484 1e-31
Q3S8M4314 Elongation of very long c no N/A 0.975 0.5 0.414 1e-31
Q95K73314 Elongation of very long c N/A N/A 0.975 0.5 0.414 1e-31
Q9EQC4312 Elongation of very long c no N/A 0.968 0.5 0.417 3e-31
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1 Back     alignment and function desciption
 Score =  139 bits (351), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 77/153 (50%), Positives = 95/153 (62%), Gaps = 4/153 (2%)

Query: 5   EASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIG 64
              +LYY SK I+LLDTIFF+LRKKNS +TFLHV+HH +M  T W  +++  G  G F  
Sbjct: 115 RTCWLYYFSKFIELLDTIFFILRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHA 174

Query: 65  LLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVL-SC--D 121
            LN+ VHVVMYSYY L ALGP+ QKYLWWKKY+T  QL QF L  IH      +  C   
Sbjct: 175 FLNTAVHVVMYSYYGLCALGPDYQKYLWWKKYLTSLQLIQFVLITIHISQFFFMEDCKYQ 234

Query: 122 MPVALTYYIFFQAVVMCVLFGNFYYQTYTKKHN 154
            PV   Y I     +  +LF +F+Y+ YTK   
Sbjct: 235 FPV-FQYIIMSYGCIFLLLFLHFWYRAYTKGQR 266




Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.
Bos taurus (taxid: 9913)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1 Back     alignment and function description
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1 Back     alignment and function description
>sp|Q9JLJ4|ELOV2_MOUSE Elongation of very long chain fatty acids protein 2 OS=Mus musculus GN=Elovl2 PE=2 SV=1 Back     alignment and function description
>sp|Q9NXB9|ELOV2_HUMAN Elongation of very long chain fatty acids protein 2 OS=Homo sapiens GN=ELOVL2 PE=2 SV=2 Back     alignment and function description
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1 Back     alignment and function description
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1 Back     alignment and function description
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1 Back     alignment and function description
>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1 Back     alignment and function description
>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query161
195390598 327 GJ24166 [Drosophila virilis] gi|19415204 0.962 0.474 0.516 4e-43
350416658 266 PREDICTED: elongation of very long chain 0.925 0.560 0.530 5e-43
195037635 323 GH18330 [Drosophila grimshawi] gi|193894 0.962 0.479 0.509 1e-42
340722457 266 PREDICTED: elongation of very long chain 0.925 0.560 0.523 1e-42
195108861 326 GI23310 [Drosophila mojavensis] gi|19391 0.968 0.478 0.512 1e-42
195158469 323 GL13809 [Drosophila persimilis] gi|19411 0.962 0.479 0.516 1e-42
125773197 321 GA19958 [Drosophila pseudoobscura pseudo 0.919 0.461 0.540 2e-42
195331061 322 GM26443 [Drosophila sechellia] gi|194121 0.913 0.456 0.537 3e-42
195572918 322 GD20962 [Drosophila simulans] gi|1942003 0.913 0.456 0.537 3e-42
24649055 322 james bond, isoform A [Drosophila melano 0.913 0.456 0.537 4e-42
>gi|195390598|ref|XP_002053955.1| GJ24166 [Drosophila virilis] gi|194152041|gb|EDW67475.1| GJ24166 [Drosophila virilis] Back     alignment and taxonomy information
 Score =  179 bits (453), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 108/155 (69%)

Query: 5   EASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIG 64
             ++ Y+ SKIIDLLDT FFVLRKKN+ ++FLHVYHH + VL +W +L+Y  GEQG+ IG
Sbjct: 113 SGAWFYFFSKIIDLLDTTFFVLRKKNNQVSFLHVYHHTITVLFSWGYLKYAPGEQGVIIG 172

Query: 65  LLNSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPV 124
           +LNS VH++MY YY +AA+GP+ QKYLWWKKY+T  QL QF L   + L++    C+MP 
Sbjct: 173 ILNSGVHIIMYFYYMVAAMGPQYQKYLWWKKYMTSIQLIQFVLILGYMLTVGAKGCNMPK 232

Query: 125 ALTYYIFFQAVVMCVLFGNFYYQTYTKKHNKQAKA 159
            LT++     ++   LFGNFY +TY K  +  A  
Sbjct: 233 TLTFFFVGNTIIFLYLFGNFYRKTYNKNKSVDANG 267




Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350416658|ref|XP_003491040.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|195037635|ref|XP_001990266.1| GH18330 [Drosophila grimshawi] gi|193894462|gb|EDV93328.1| GH18330 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|340722457|ref|XP_003399622.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|195108861|ref|XP_001999011.1| GI23310 [Drosophila mojavensis] gi|193915605|gb|EDW14472.1| GI23310 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195158469|ref|XP_002020108.1| GL13809 [Drosophila persimilis] gi|194116877|gb|EDW38920.1| GL13809 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|125773197|ref|XP_001357857.1| GA19958 [Drosophila pseudoobscura pseudoobscura] gi|54637590|gb|EAL26992.1| GA19958 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195331061|ref|XP_002032221.1| GM26443 [Drosophila sechellia] gi|194121164|gb|EDW43207.1| GM26443 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|195572918|ref|XP_002104442.1| GD20962 [Drosophila simulans] gi|194200369|gb|EDX13945.1| GD20962 [Drosophila simulans] Back     alignment and taxonomy information
>gi|24649055|ref|NP_732761.1| james bond, isoform A [Drosophila melanogaster] gi|24649057|ref|NP_732762.1| james bond, isoform C [Drosophila melanogaster] gi|28571825|ref|NP_651062.3| james bond, isoform B [Drosophila melanogaster] gi|7300877|gb|AAF56018.1| james bond, isoform A [Drosophila melanogaster] gi|16769022|gb|AAL28730.1| LD14839p [Drosophila melanogaster] gi|23171974|gb|AAN13911.1| james bond, isoform C [Drosophila melanogaster] gi|28381423|gb|AAN13910.2| james bond, isoform B [Drosophila melanogaster] gi|220942986|gb|ACL84036.1| CG6921-PA [synthetic construct] gi|220953142|gb|ACL89114.1| CG6921-PA [synthetic construct] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query161
FB|FBgn0260942322 bond "james bond" [Drosophila 0.900 0.450 0.544 2.8e-43
ZFIN|ZDB-GENE-050522-453264 zgc:112263 "zgc:112263" [Danio 0.975 0.594 0.490 1.9e-42
ZFIN|ZDB-GENE-060929-240268 zgc:153394 "zgc:153394" [Danio 0.975 0.585 0.496 1.4e-41
FB|FBgn0038986295 CG5278 [Drosophila melanogaste 0.937 0.511 0.512 2e-40
FB|FBgn0038983277 CG5326 [Drosophila melanogaste 0.981 0.570 0.452 4.3e-38
ZFIN|ZDB-GENE-030131-5485282 elovl7b "ELOVL family member 7 0.888 0.507 0.517 8e-37
FB|FBgn0051522365 CG31522 [Drosophila melanogast 0.937 0.413 0.450 1.3e-36
UNIPROTKB|A0JNC4281 ELOVL7 "Elongation of very lon 0.888 0.508 0.523 1.3e-36
UNIPROTKB|G5E592260 ELOVL7 "Elongation of very lon 0.888 0.55 0.523 1.3e-36
UNIPROTKB|Q1HRV8358 AAEL008004 "Elongation of very 0.968 0.435 0.429 1.7e-36
FB|FBgn0260942 bond "james bond" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 79/145 (54%), Positives = 106/145 (73%)

Query:     7 SYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLL 66
             ++ Y+ SKIIDLLDT FFVLRKK++ ++FLHVYHH + VL +W +L+Y  GEQG+ IG+L
Sbjct:   115 AWFYFFSKIIDLLDTTFFVLRKKDNQVSFLHVYHHTITVLFSWGYLKYAPGEQGVIIGIL 174

Query:    67 NSLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVLSCDMPVAL 126
             NS VH++MY YY +AA+GP+ QKYLWWKKY+T  QL QF L   + L++    C+MP  L
Sbjct:   175 NSGVHIIMYFYYMVAAMGPQYQKYLWWKKYMTSIQLIQFVLILGYMLTVGAKGCNMPKTL 234

Query:   127 TYYIFFQAVVMCVLFGNFYYQTYTK 151
             T++     V+   LFGNFY +TY K
Sbjct:   235 TFFFVGNTVIFLYLFGNFYRKTYKK 259




GO:0016021 "integral to membrane" evidence=IEA
GO:0000915 "cytokinesis, actomyosin contractile ring assembly" evidence=IMP
GO:0051225 "spindle assembly" evidence=IMP
GO:0007111 "cytokinesis after meiosis II" evidence=IMP
GO:0007110 "cytokinesis after meiosis I" evidence=IMP
GO:0007112 "male meiosis cytokinesis" evidence=IMP
GO:0000212 "meiotic spindle organization" evidence=IMP
ZFIN|ZDB-GENE-050522-453 zgc:112263 "zgc:112263" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060929-240 zgc:153394 "zgc:153394" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0038986 CG5278 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0038983 CG5326 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5485 elovl7b "ELOVL family member 7, elongation of long chain fatty acids (yeast) b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|A0JNC4 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|G5E592 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q1HRV8 AAEL008004 "Elongation of very long chain fatty acids protein AAEL008004" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A0JNC4ELOV7_BOVIN2, ., 3, ., 1, ., n, 80.50320.92540.5302yesN/A
A1L3X0ELOV7_HUMAN2, ., 3, ., 1, ., n, 80.63460.64590.3701yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query161
pfam01151244 pfam01151, ELO, GNS1/SUR4 family 4e-47
PTZ00251272 PTZ00251, PTZ00251, fatty acid elongase; Provision 1e-05
>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family Back     alignment and domain information
 Score =  152 bits (387), Expect = 4e-47
 Identities = 68/150 (45%), Positives = 85/150 (56%), Gaps = 6/150 (4%)

Query: 8   YLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLN 67
           Y  ++SK ++LLDT+F VLRKK   ++FLHVYHHA M+L +W  L+Y  G    FI LLN
Sbjct: 91  YWLFLSKFLELLDTVFLVLRKKQRQLSFLHVYHHATMLLYSWLGLKYGPGGHFWFIALLN 150

Query: 68  SLVHVVMYSYYFLAALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSLIVL----SCDMP 123
           S VHV+MY YYFLAALG      +WWKKYIT+ Q+ QF L   H    +       C  P
Sbjct: 151 SFVHVIMYFYYFLAALGAR-GLPVWWKKYITQLQIIQFVLGLAHVGYALYNYTKGGCGGP 209

Query: 124 VAL-TYYIFFQAVVMCVLFGNFYYQTYTKK 152
                       V    LF NFY ++Y K 
Sbjct: 210 FPKAVRLGLVYYVSYLFLFLNFYIKSYKKP 239


Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

>gnl|CDD|140278 PTZ00251, PTZ00251, fatty acid elongase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 161
KOG3071|consensus274 100.0
PF01151250 ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr 100.0
PTZ00251272 fatty acid elongase; Provisional 100.0
KOG3072|consensus282 100.0
>KOG3071|consensus Back     alignment and domain information
Probab=100.00  E-value=2.9e-55  Score=365.69  Aligned_cols=160  Identities=48%  Similarity=0.894  Sum_probs=151.0

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEeeeehhhhHHHHhhhhhhccccchhHHHHHHHHHHHHHHHHHHHH
Q psy12386          1 MMFCEASYLYYISKIIDLLDTIFFVLRKKNSHITFLHVYHHAMMVLTTWAFLRYFKGEQGIFIGLLNSLVHVVMYSYYFL   80 (161)
Q Consensus         1 ~~~~~~~~~f~lsK~~El~DTvf~VLrKk~~qlsfLHvyHH~~~~~~~w~~~~~~~~~~~~~~~~~Ns~VH~iMY~YY~l   80 (161)
                      +|+++++|+||+||+.|++||+|+|||||+||+||||+|||++|++.+|.++++.++|+.++.+.+|++||++||+||++
T Consensus       107 ~r~~~~~~~yylsKflel~DTvFfVLRKk~rqlsFLHvyHH~~m~~~~~~~l~~~~~g~~~~~~~lNs~VHviMY~YYfl  186 (274)
T KOG3071|consen  107 LRERFWSYLYYLSKFLELLDTVFFVLRKKDRQLSFLHVYHHGVMAFLSYLWLKFYGGGHGFFAILLNSFVHVIMYGYYFL  186 (274)
T ss_pred             eeehHHHHHHHHHHHHHHHhheeeEEEccCCceEEEEEEecchHHHhhhheeEEeCCceeeeeeehhhhHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999998899999999999999999999999


Q ss_pred             HHhCCCccchhhhhhhhccccchhhHHHHhhhhhh-ccc-CCCCcHH-HHHHHHHHHHHHHHHHHHHhHhhccCCCcccc
Q psy12386         81 AALGPEVQKYLWWKKYITKFQLTQFALFCIHQLSL-IVL-SCDMPVA-LTYYIFFQAVVMCVLFGNFYYQTYTKKHNKQA  157 (161)
Q Consensus        81 ~a~g~~~~~~~~~k~~iT~~QivQF~~~~~~~~~~-~~~-~C~~~~~-~~~~~~~~~~~~l~LF~~Fy~~~Y~~~~~~~~  157 (161)
                      +|+||++++.+|||+++|.+|++||++..+|..+. ++. ||++|.+ +.+.+.+.+++|++||+|||+|+|.|++++++
T Consensus       187 sa~G~~v~~~lWWkky~t~vQlvqf~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~l~LF~nFY~~tY~k~~~~~~  266 (274)
T KOG3071|consen  187 SAFGPRVQWYLWWKKYITIVQLVQFLILFVHTLYVHLFKPGCCFGIGAWAFNGSVINVSFLLLFSNFYIKTYKKPKKKKA  266 (274)
T ss_pred             HhhCcCccccchHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence            99999999999999999999999999999999988 554 8999988 78888889999999999999999999877776


Q ss_pred             ccc
Q psy12386        158 KAT  160 (161)
Q Consensus       158 k~~  160 (161)
                      |++
T Consensus       267 ~~~  269 (274)
T KOG3071|consen  267 KKK  269 (274)
T ss_pred             hhh
Confidence            554



>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established Back     alignment and domain information
>PTZ00251 fatty acid elongase; Provisional Back     alignment and domain information
>KOG3072|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00