Psyllid ID: psy12387


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
MAQVITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAFGVYIVSPGIKLCPHGTS
cHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
cHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEcccccc
MAQVITGVVNITNYLietdhtdprtrdwfwtgslwrPFLLMCFYYYFVKFlgpwfmknrqpynldtVLKVYNVFQILYSAFGVyivspgiklcphgts
MAQVITGVVNITNylietdhtdprtrdWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAFGVYIVSPGIKLCPHGTS
MAQVITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAFGVYIVSPGIKLCPHGTS
***VITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAFGVYIVSPGIKLC*****
MAQVITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAFGVYIVSPGIKLCPHG**
MAQVITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAFGVYIVSPGIKLCPHGTS
MAQVITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAFGVYIVSPGIKLCP****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooo
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooo
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooo
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooo
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MAQVITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAFGVYIVSPGIKLCPHGTS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query98 2.2.26 [Sep-21-2011]
Q1HRV8 358 Elongation of very long c N/A N/A 0.846 0.231 0.367 2e-07
A1L3X0 281 Elongation of very long c yes N/A 0.653 0.227 0.406 3e-07
A0JNC4 281 Elongation of very long c yes N/A 0.653 0.227 0.390 3e-06
D4ADY9 281 Elongation of very long c yes N/A 0.653 0.227 0.359 1e-05
Q9D2Y9 281 Elongation of very long c yes N/A 0.653 0.227 0.359 2e-05
Q9JLJ5 279 Elongation of very long c no N/A 0.795 0.279 0.337 0.0002
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2 Back     alignment and function desciption
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)

Query: 1  MAQVITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCF-YYYFVKFLGPWFMKNR 59
          MA ++  + ++ +Y+    + DPRT+DW    S + P L +C  Y Y VK LGP  M+NR
Sbjct: 1  MALIMKYIDSMHHYM--DKYGDPRTKDWPLMSSPF-PTLALCLGYVYLVKVLGPRLMENR 57

Query: 60 QPYNLDTVLKVYNVFQILYSAFGVYIV 86
          +P+ L   L +YN  Q+++SA+  Y +
Sbjct: 58 KPFQLRNTLILYNFVQVVFSAWLFYEI 84




Could be implicated in synthesis of very long chain fatty acids.
Aedes aegypti (taxid: 7159)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1 Back     alignment and function description
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1 Back     alignment and function description
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1 Back     alignment and function description
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1 Back     alignment and function description
>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus GN=Elovl1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query98
156553608 285 PREDICTED: elongation of very long chain 0.846 0.291 0.404 4e-10
380014484 262 PREDICTED: elongation of very long chain 0.642 0.240 0.507 1e-09
322800873 347 hypothetical protein SINV_08585 [Solenop 0.846 0.239 0.392 1e-09
307194399 273 Elongation of very long chain fatty acid 0.653 0.234 0.468 2e-09
307203069174 Elongation of very long chain fatty acid 0.714 0.402 0.457 2e-09
332016755 268 Elongation of very long chain fatty acid 0.673 0.246 0.469 5e-09
307194400 266 Elongation of very long chain fatty acid 0.653 0.240 0.468 5e-09
195572129 265 GD20752 [Drosophila simulans] gi|1941999 0.602 0.222 0.437 1e-08
380014490 319 PREDICTED: elongation of very long chain 0.795 0.244 0.379 1e-08
66535318 309 PREDICTED: elongation of very long chain 0.806 0.255 0.387 1e-08
>gi|156553608|ref|XP_001599867.1| PREDICTED: elongation of very long chain fatty acids protein 7-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)

Query: 1  MAQVITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQ 60
          MA +I  ++    Y+ E +  DPRT+DWF  GS W    L+ FY +F+  LGP  M NR 
Sbjct: 1  MATIIREIMRGYRYMNE-EIADPRTKDWFLIGSPWPGLALLGFYLHFIYRLGPSLMANRP 59

Query: 61 PYNLDTVLKVYNVFQILYSAFGVY 84
          P  L+ V+++YN+ QI+ S++  Y
Sbjct: 60 PMKLELVIRIYNIVQIVLSSYLFY 83




Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014484|ref|XP_003691261.1| PREDICTED: elongation of very long chain fatty acids protein 7-like, partial [Apis florea] Back     alignment and taxonomy information
>gi|322800873|gb|EFZ21717.1| hypothetical protein SINV_08585 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307194399|gb|EFN76717.1| Elongation of very long chain fatty acids protein AAEL008004 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307203069|gb|EFN82257.1| Elongation of very long chain fatty acids protein 7 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332016755|gb|EGI57584.1| Elongation of very long chain fatty acids protein 7 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307194400|gb|EFN76718.1| Elongation of very long chain fatty acids protein AAEL008004 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|195572129|ref|XP_002104049.1| GD20752 [Drosophila simulans] gi|194199976|gb|EDX13552.1| GD20752 [Drosophila simulans] Back     alignment and taxonomy information
>gi|380014490|ref|XP_003691264.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Apis florea] Back     alignment and taxonomy information
>gi|66535318|ref|XP_623221.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like, partial [Apis mellifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query98
FB|FBgn0038986 295 CG5278 [Drosophila melanogaste 0.836 0.277 0.458 3.9e-12
FB|FBgn0037764 265 CG9459 [Drosophila melanogaste 0.602 0.222 0.421 1.3e-10
FB|FBgn0051522 365 CG31522 [Drosophila melanogast 0.826 0.221 0.388 4.5e-10
FB|FBgn0034382 263 CG18609 [Drosophila melanogast 0.520 0.193 0.547 2.4e-09
UNIPROTKB|Q1HRV8 358 AAEL008004 "Elongation of very 0.826 0.226 0.376 2.5e-09
ZFIN|ZDB-GENE-030131-6149 289 elovl7a "ELOVL family member 7 0.673 0.228 0.409 3.2e-09
UNIPROTKB|D6RBM2165 ELOVL7 "Elongation of very lon 0.642 0.381 0.412 3.6e-09
UNIPROTKB|D6RBR588 ELOVL7 "Elongation of very lon 0.642 0.715 0.412 3.6e-09
FB|FBgn0038983 277 CG5326 [Drosophila melanogaste 0.765 0.270 0.350 6.1e-09
UNIPROTKB|A1L3X0 281 ELOVL7 "Elongation of very lon 0.642 0.224 0.412 1.1e-08
FB|FBgn0038986 CG5278 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 166 (63.5 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 39/85 (45%), Positives = 50/85 (58%)

Query:     1 MAQVITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFL-LMCFYYYFVKFLGPWFMKNR 59
             MA V    V+  N+L  TD  DPRT DWF   S   P L ++ FY +FV   GP FMK+R
Sbjct:     1 MAAVNATQVDYWNFLF-TDLADPRTNDWFLIKSPL-PLLGILAFYLFFVLSWGPKFMKDR 58

Query:    60 QPYNLDTVLKVYNVFQILYSAFGVY 84
             +P+ L+  L VYN FQ+  S + VY
Sbjct:    59 KPFKLERTLLVYNFFQVALSVWMVY 83




GO:0016021 "integral to membrane" evidence=IEA
FB|FBgn0037764 CG9459 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0034382 CG18609 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q1HRV8 AAEL008004 "Elongation of very long chain fatty acids protein AAEL008004" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-6149 elovl7a "ELOVL family member 7, elongation of long chain fatty acids (yeast) a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|D6RBM2 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|D6RBR5 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0038983 CG5326 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|A1L3X0 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query98
pfam01151 244 pfam01151, ELO, GNS1/SUR4 family 5e-10
>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family Back     alignment and domain information
 Score = 53.4 bits (129), Expect = 5e-10
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 29 FWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAFGVY 84
              S W   L++  Y  FV FLGP  M+NR+P++L  +L V+N+F +L S +G Y
Sbjct: 1  PLLSSPWPVILIIVLYLVFV-FLGPKIMRNRKPFDLKRLLIVHNLFLVLLSLYGFY 55


Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 98
PTZ00251 272 fatty acid elongase; Provisional 99.66
PF01151 250 ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr 99.6
KOG3071|consensus 274 99.53
KOG3072|consensus 282 99.38
>PTZ00251 fatty acid elongase; Provisional Back     alignment and domain information
Probab=99.66  E-value=1e-16  Score=122.18  Aligned_cols=66  Identities=23%  Similarity=0.480  Sum_probs=61.3

Q ss_pred             CCcccccccccCCchHHHHHHHHHHhhhhhhhHhhhcc----CCCcc-cchhHHhHHHHHHHHHHHHHHHHHh
Q psy12387         21 TDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKN----RQPYN-LDTVLKVYNVFQILYSAFGVYIVSP   88 (98)
Q Consensus        21 ~d~r~~~w~l~~s~~~~~~i~~~Yl~~V~~~G~~~Mk~----Rkp~~-Lk~~l~~yN~~lv~lS~~~~~~~~~   88 (98)
                      ..+|+++| +++||++++.++++|+++| +.||++|||    |||++ ||+++.+||++|+++|++++++...
T Consensus        13 ~~~~~~~w-l~~~~~~~~~i~~~Yl~~V-~~Gp~~M~~~~~~Rkp~~~Lr~~l~~yNl~l~v~s~~~~~~~~~   83 (272)
T PTZ00251         13 DGHAVQKW-LASNVDICVYIAAAYLTFV-FKGPQLVDAIFHGNPPVPLIKKCWALWNIGLSVFSMYGVYRVVP   83 (272)
T ss_pred             CcHHHHHH-HHhCCHHHHHHHHHHHHHH-HHHHHHHhhccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            36788999 7999999999999999999 599999975    99999 9999999999999999999998863



>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established Back     alignment and domain information
>KOG3071|consensus Back     alignment and domain information
>KOG3072|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00