Psyllid ID: psy12461

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
Protein Sequence
MLQFQDVWIDRIRHDLEFHSGVHMDNIVSSAKNYMEDSTELKTKVMELKGELMIDLTEKDDDLESCVMSSEHNRPVGDTGESLVQSESYMQSILGGASLCYKKRQGGSSGHSSSTGPNIGERPALVFSGTQNVVPGRVNGEASNGAGVVGHELHGLRSAHVPHANAIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ
Secondary Structure (PSIPRED)
cccccHHHHHHHHccccccccccccHHHHHHHHHccHHHHHHHHHEEEccEEEEEEcccccccEEEEEEccccccccccccccccHHHHHHHccccccEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHcccEEEEcccccccccccccEEEEEEccccccEEEEEcccccEEEEEcccccEEEEEccccccEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHccHHcccccHHHHHHHHHHHHHcccccHcEEEEEccEEEEEccccccccHHccEccccccccccccccccccHHHHHHHHccccHEEEcccccccccccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHccccHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHccHcccccccccccccEEEEEEccccccEEEEcccccEEEEEEccccEEEEEEccccccEEEEEEcccccc
Coil and Loop (DISEMBL)
MLQFQDVWIDRIRHDlefhsgvhmDNIVSSAKNYMEDSTELKTKVMELKGELMIdltekdddlescvmssehnrpvgdtgeslVQSESYMQSILGGASLcykkrqggssghssstgpnigerpalvfsgtqnvvpgrvngeasngagvvghelhglrsahvphANAIAaeaagtpnqpveqiGISEEVQAKLQDKATILTQErkkrsraapedlstadNLRAFRNVssqaglhsasvpgilAMDIQVEDtskiltggndcqatvfNKDTEQVVAILKGHRKKVTRVVYHPSELQ
Flexible Loop (DISEMBL)
MLQFQDVWIDRIRHDLEFHSGVHMDNIVSSAKNYMEDSTELKTKVMELKGELMIDLTEKDDDLESCVMSsehnrpvgdtgeSLVQSESYMQSILGGASLCYKKRQGGssghssstgpnIGERPALVFSGTQNVVPGRVNGEASNGAGVVGHELHGLRSAHVPHANAIAAEAAGTPNQPVEQIGISEEVQAKLQDKAtiltqerkkrsraapedlstadnLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILkghrkkvtrvvyhpselq
Low Complexity Region (SEG)
MLQFQDVWIDRIRHDLEFHSGVHMDNIVSSAKNYMEDSTELKTKVMELKGELMIDLTEKDDDLESCVMSSEHNRPVGDTGESLVQSESYMQSILGGASLCYKKRQggssghssstgPNIGERPALVFSGTQNVVPGRVNGEASNGAGVVGHELHGLRSAHVPHANAIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ
Disordered region (IsUnstruct)
***FQDVWIDRIRHDLEFHSGVHMDNIVSS*********************LM***************************************ILGGASLCY*********************************************GVVGHELHGLR*****************************************************************************ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVY******
Disordered Region (DISOPRED)
**QFQDVWIDRIRHDLEFHSGVHMDNIVSSAKNYMEDSTELKTKVMELKGELMIDLTEKDDDLESCVMSSEHNRPVG***********Y*QSILGGA***************************LVFSGTQNVVPGRVNGE**********************************************VQAKLQD*******************LSTADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS***
Disordered Region (DISEMBL)
MLQFQDVWIDRIRHDLEFHSGVHMDNIVSSAKNYMEDSTELKTKVMELKGELMIDLTEKDDDLESCVMSSEHNRPVGDTGESLVQSESYMQSILGGASLCYK**************PNIGERPALVFSGTQNVVPGRVNGEASNGAGVVGHELHGLRSAHVPHANAIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILT**************STADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ
Disordered Region (DISPRO)
MLQFQDVWIDRIRHDLEFHSGVHMDNIVSSAKNYMEDSTELKTKVMELKGELMIDLTEKDDDLESCVM***************V***SYMQSILGGASLCYKK*************PNIGERPALVFSGTQNVVPGRVNGEASNGAGVVGHELHG****************************ISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLQFQDVWIDRIRHDLEFHSGVHMDNIVSSxxxxxxxxxxxxxxxxxxxxxLMIDLTEKDDDLESCVMSSEHNRPVGDTGESLVQSESYMQSILGGASLCYKKRQGGSSGHSSSTGPNIGERPALVFSGTQNVVPGRVNGEASNGAGVVGHELHGLRSAHVPHANAIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	294	2.2.26 [Sep-21-2011]
Q9JMJ4	504	Pre-mRNA-processing facto	yes	N/A	0.411	0.240	0.561	7e-33
Q99KP6	504	Pre-mRNA-processing facto	no	N/A	0.411	0.240	0.561	7e-33
Q9UMS4	504	Pre-mRNA-processing facto	yes	N/A	0.411	0.240	0.553	2e-32
Q08E38	504	Pre-mRNA-processing facto	yes	N/A	0.411	0.240	0.553	2e-32
Q5ZMA2	505	Pre-mRNA-processing facto	yes	N/A	0.384	0.223	0.535	6e-26
Q10051	492	Pre-mRNA-processing facto	yes	N/A	0.377	0.225	0.394	7e-17
Q94BR4	523	Pre-mRNA-processing facto	yes	N/A	0.374	0.210	0.394	2e-13
O22785	525	Pre-mRNA-processing facto	no	N/A	0.346	0.194	0.405	4e-12
Q9AV81	527	U-box domain-containing p	yes	N/A	0.360	0.201	0.345	2e-09

>sp|Q9JMJ4|PRP19_RAT Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2 SV=2

 Score =  141 bits (355), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/121 (56%), Positives = 87/121 (71%)

Query: 172 AGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAG 231
           AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L  +R V+S  G
Sbjct: 156 AGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVG 215

Query: 232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
           LHSAS+PGILA+D+   DT+KILTGG D    VF+K TEQ++A LKGH KKVT VV+HPS
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPS 275

Query: 292 E 292
           +
Sbjct: 276 Q 276

Plays a role in DNA double-strand break (DSB) repair. Binds double-stranded DNA in a sequence-nonspecific manner. Acts as a structural component of the nuclear framework. May also serve as a support for spliceosome binding and activity. Essential for spliceosome assembly in a oligomerization-dependent manner and might also be important for spliceosome stability. May have E3 ubiquitin ligase activity. The PSO4 complex is required in the DNA interstrand cross-links (ICLs) repair process.
Rattus norvegicus (taxid: 10116)

>sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1

 Score =  141 bits (355), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/121 (56%), Positives = 87/121 (71%)

Query: 172 AGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAG 231
           AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L  +R V+S  G
Sbjct: 156 AGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVG 215

Query: 232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
           LHSAS+PGILA+D+   DT+KILTGG D    VF+K TEQ++A LKGH KKVT VV+HPS
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPS 275

Query: 292 E 292
           +
Sbjct: 276 Q 276

Plays a role in DNA double-strand break (DSB) repair. Binds double-stranded DNA in a sequence-nonspecific manner. Acts as a structural component of the nuclear framework. May also serve as a support for spliceosome binding and activity. Essential for spliceosome assembly in a oligomerization-dependent manner and might also be important for spliceosome stability. May have E3 ubiquitin ligase activity. The PSO4 complex is required in the DNA interstrand cross-links (ICLs) repair process.

Mus musculus (taxid: 10090)

>sp|Q9UMS4|PRP19_HUMAN Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1

 Score =  139 bits (351), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 87/121 (71%)

Query: 172 AGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAG 231
           AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L  +R V+S  G
Sbjct: 156 AGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVG 215

Query: 232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
           LHSAS+PGILA+D+   DT+KILTGG D    VF+K +EQ++A LKGH KKVT VV+HPS
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPS 275

Query: 292 E 292
           +
Sbjct: 276 Q 276

Plays a role in DNA double-strand break (DSB) repair and pre-mRNA splicing reaction. Binds double-stranded DNA in a sequence-nonspecific manner. Acts as a structural component of the nuclear framework. May also serve as a support for spliceosome binding and activity. Essential for spliceosome assembly in a oligomerization-dependent manner and might also be important for spliceosome stability. May have E3 ubiquitin ligase activity. The PSO4 complex is required in the DNA interstrand cross-links (ICLs) repair process. Overexpression of PRPF19 might extend the cellular life span by increasing the resistance to stress or by improving the DNA repair capacity of the cells.

Homo sapiens (taxid: 9606)

>sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1

 Score =  139 bits (351), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 87/121 (71%)

Query: 172 AGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAG 231
           AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L  +R V+S  G
Sbjct: 156 AGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVG 215

Query: 232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
           LHSAS+PGILA+D+   DT+KILTGG D    VF+K +EQ++A LKGH KKVT VV+HPS
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPS 275

Query: 292 E 292
           +
Sbjct: 276 Q 276

Plays a role in DNA double-strand break (DSB) repair. Binds double-stranded DNA in a sequence-nonspecific manner. Acts as a structural component of the nuclear framework. May also serve as a support for spliceosome binding and activity. Essential for spliceosome assembly in a oligomerization-dependent manner and might also be important for spliceosome stability. May have E3 ubiquitin ligase activity. The PSO4 complex is required in the DNA interstrand cross-links (ICLs) repair process.

Bos taurus (taxid: 9913)

>sp|Q5ZMA2|PRP19_CHICK Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1

 Score =  118 bits (295), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/114 (53%), Positives = 79/114 (69%), Gaps = 1/114 (0%)

Query: 180 EQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQA-GLHSASVP 238
           E  G++ E+  K QDKAT+LT ERKKR +  PE+L  A   +     S +  GLHSAS+P
Sbjct: 164 ELAGMTPEIIQKPQDKATVLTTERKKRGKTVPEELVEARGAQQVPGRSPRMWGLHSASIP 223

Query: 239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292
           GILA+D+   DT+KILTGG D    VF+K +EQ++A LKGH KKVT VV+HPS+
Sbjct: 224 GILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQ 277

Plays a role in DNA double-strand break (DSB) repair. Binds double-stranded DNA in a sequence-nonspecific manner. Acts as a structural component of the nuclear framework. May also serve as a support for spliceosome binding and activity.

Gallus gallus (taxid: 9031)

>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans GN=T10F2.4 PE=3 SV=2

 Score = 88.2 bits (217), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 3/114 (2%)

Query: 180 EQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAGLHSASVPG 239
           +Q G+SE + AKL++K+  LT ERK+R +  PE L+  + L   +  +S  G+HS   PG
Sbjct: 154 DQQGLSEAILAKLEEKSKSLTAERKQRGKNLPEGLAKTEELAELKQTASHTGIHSTGTPG 213

Query: 240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL 293
           I A+DI+   +   LTGG D    +++ + EQV+   KGH KK+  VV HP  +
Sbjct: 214 ITALDIKGNLS---LTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNI 264

Plays a role in DNA double-strand break (DSB) repair. Binds double-stranded DNA in a sequence-nonspecific manner. Acts as a structural component of the nuclear framework. May also serve as a support for spliceosome binding and activity.

Caenorhabditis elegans (taxid: 6239)

>sp|Q94BR4|PR19A_ARATH Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana GN=PRP19A PE=1 SV=1

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 4/114 (3%)

Query: 175 PNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAGLHS 234
           PN    ++GIS EV  +L D    L+Q+RKKR    P+ L++ D L  F  +SS   LH 
Sbjct: 163 PNAKKMRLGISAEVITELTDCNAALSQQRKKRQ--IPKTLASVDALEKFTQLSSHP-LHK 219

Query: 235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVY 288
            + PGI +MDI +     I TGG D  A +F++ + Q+++ L GH KKVT + +
Sbjct: 220 TNKPGIFSMDI-LHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKF 272

Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Functions as U-box E3 ubiquitin-protein ligase (By similarity). May also serve as a support for spliceosome binding and activity.

Arabidopsis thaliana (taxid: 3702)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|O22785|PR19B_ARATH Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana GN=PRP19B PE=1 SV=3

 Score = 72.0 bits (175), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 4/106 (3%)

Query: 183 GISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAGLHSASVPGILA 242
           GIS E+  +L D    L+Q+RKKR    P+ L++ D L  F  +SS   LH  + PGI +
Sbjct: 171 GISAEIITELTDCNAALSQKRKKRQ--IPQTLASIDTLERFTQLSSHP-LHKTNKPGICS 227

Query: 243 MDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVY 288
           MDI +     I TGG D  A +F++ + Q+++ L GH KKVT V +
Sbjct: 228 MDI-LHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKF 272

Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immnunity. Functions as U-box E3 ubiquitin-protein ligase. May also serve as a support for spliceosome binding and activity.

Arabidopsis thaliana (taxid: 3702)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q9AV81|PUB72_ORYSJ U-box domain-containing protein 72 OS=Oryza sativa subsp. japonica GN=PUB72 PE=2 SV=1

 Score = 63.2 bits (152), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 183 GISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAGLHSASVPGILA 242
           GI+  +  +L +  T+L+  RKKR    P  L++ D +  +  +SS   LH  + PGIL+
Sbjct: 170 GINPVMIDELTECNTMLSAHRKKRQ--VPPTLASIDAIERYTQISSHP-LHKTNKPGILS 226

Query: 243 MDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE 292
           MDI       I TGG D  A +F++ + Q++  L GH KK+T + + P +
Sbjct: 227 MDIH-PSKDIIATGGIDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRD 275

Possesses E3 ubiquitin-protein ligase in vitro.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
242002940	458	pre-mRNA-splicing factor, putative [Pedi	0.445	0.286	0.684	3e-45
91090784	500	PREDICTED: similar to wd-repeat protein	0.431	0.254	0.708	4e-45
328723776	513	PREDICTED: pre-mRNA-processing factor 19	0.431	0.247	0.677	7e-45
332024009	503	Pre-mRNA-processing factor 19 [Acromyrme	0.465	0.272	0.652	7e-44
239791755	353	ACYPI005525 [Acyrthosiphon pisum]	0.418	0.348	0.674	1e-43
307178212	504	Pre-mRNA-processing factor 19 [Camponotu	0.462	0.269	0.649	1e-43
340711277	504	PREDICTED: pre-mRNA-processing factor 19	0.431	0.251	0.692	2e-43
66513511	504	PREDICTED: pre-mRNA-processing factor 19	0.431	0.251	0.692	2e-43
380030253	504	PREDICTED: pre-mRNA-processing factor 19	0.431	0.251	0.692	2e-43
383852262	504	PREDICTED: pre-mRNA-processing factor 19	0.431	0.251	0.692	2e-43

>gi|242002940|ref|XP_002422550.1| pre-mRNA-splicing factor, putative [Pediculus humanus corporis] gi|212505340|gb|EEB09812.1| pre-mRNA-splicing factor, putative [Pediculus humanus corporis]

 Score =  187 bits (476), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 91/133 (68%), Positives = 107/133 (80%), Gaps = 2/133 (1%)

Query: 161 VPHANAIAAEAA-GTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADN 219
           +PH  A+ AEA  G PNQP E+ G++E+V  KLQDKATILTQERKK+ R  PEDL  AD+
Sbjct: 97  IPHP-AVGAEAGPGLPNQPTEEAGMTEDVIQKLQDKATILTQERKKKGRTIPEDLVPADS 155

Query: 220 LRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH 279
           +R FR +SS  GLHSAS+PGIL++D+   DTSKILTGGND  AT+FNKDTEQVVAILKGH
Sbjct: 156 IRNFRTLSSHPGLHSASIPGILSLDVHAADTSKILTGGNDKNATIFNKDTEQVVAILKGH 215

Query: 280 RKKVTRVVYHPSE 292
            KKVTRV+YHP E
Sbjct: 216 TKKVTRVIYHPEE 228

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090784|ref|XP_970005.1| PREDICTED: similar to wd-repeat protein [Tribolium castaneum] gi|270013971|gb|EFA10419.1| hypothetical protein TcasGA2_TC012659 [Tribolium castaneum]

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 90/127 (70%), Positives = 105/127 (82%)

Query: 166 AIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRN 225
           A+AAEA G  NQP EQ G+++EV  KLQDKAT+LTQERKKRS+  PE++ST + LR F+ 
Sbjct: 147 AVAAEAGGIANQPTEQCGLTDEVIEKLQDKATVLTQERKKRSKTVPEEVSTPEQLRGFKT 206

Query: 226 VSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR 285
           ++S  GLHSASVPGILA+D+   DTSKILTGGND  ATVFNKDTEQVVAILKGH KKVT+
Sbjct: 207 LASHPGLHSASVPGILALDVHNSDTSKILTGGNDRNATVFNKDTEQVVAILKGHTKKVTK 266

Query: 286 VVYHPSE 292
           VVYHP E
Sbjct: 267 VVYHPDE 273

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723776|ref|XP_003247938.1| PREDICTED: pre-mRNA-processing factor 19-like [Acyrthosiphon pisum]

 Score =  186 bits (473), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 86/127 (67%), Positives = 106/127 (83%)

Query: 166 AIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRN 225
           AIA EAAG PNQP E+ GI++++  KLQ+KAT+LTQERKKR R  PEDL   ++L+ F+ 
Sbjct: 158 AIAMEAAGVPNQPTEEAGITDDIIRKLQEKATVLTQERKKRGRTVPEDLMDQESLKGFKT 217

Query: 226 VSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR 285
           ++S  GLHSASVPGIL++DI  EDTSKILTGGND  ATVFNKDTEQ++A+LKGH KKVTR
Sbjct: 218 LASHPGLHSASVPGILSLDIHSEDTSKILTGGNDKNATVFNKDTEQIIAVLKGHTKKVTR 277

Query: 286 VVYHPSE 292
           V+YHP+E
Sbjct: 278 VIYHPNE 284

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024009|gb|EGI64227.1| Pre-mRNA-processing factor 19 [Acromyrmex echinatior]

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 90/138 (65%), Positives = 109/138 (78%), Gaps = 1/138 (0%)

Query: 155 GLRSAHVPHANAIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDL 214
           G+  A +P   A+A EA GT  QP+EQ GI+E+V  KLQ++AT+LTQERK+R R+ PEDL
Sbjct: 139 GIVQATIPQP-AVAVEAGGTATQPMEQAGITEDVIQKLQERATVLTQERKRRGRSVPEDL 197

Query: 215 STADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA 274
              D++R+F+ ++S  GLHSASVPGILA+DI   DTSKILTGG D  ATVFNKDTEQVVA
Sbjct: 198 MPQDSIRSFQTLASHPGLHSASVPGILALDIHNADTSKILTGGADKNATVFNKDTEQVVA 257

Query: 275 ILKGHRKKVTRVVYHPSE 292
           ILKGH KKVTRV+YHP E
Sbjct: 258 ILKGHTKKVTRVIYHPEE 275

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239791755|dbj|BAH72302.1| ACYPI005525 [Acyrthosiphon pisum]

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 83/123 (67%), Positives = 103/123 (83%)

Query: 170 EAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQ 229
           EAAG PNQP E+ GI++++  KLQ+KAT+LTQERKKR R  PEDL   ++L+ F+ ++S 
Sbjct: 2   EAAGVPNQPTEEAGITDDIIRKLQEKATVLTQERKKRGRTVPEDLMDQESLKGFKTLASH 61

Query: 230 AGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYH 289
            GLHSASVPGIL++DI  EDTSKILTGGND  ATVFNKDTEQ++A+LKGH KKVTRV+YH
Sbjct: 62  PGLHSASVPGILSLDIHSEDTSKILTGGNDKNATVFNKDTEQIIAVLKGHTKKVTRVIYH 121

Query: 290 PSE 292
           P+E
Sbjct: 122 PNE 124

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307178212|gb|EFN66997.1| Pre-mRNA-processing factor 19 [Camponotus floridanus]

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/137 (64%), Positives = 110/137 (80%), Gaps = 1/137 (0%)

Query: 156 LRSAHVPHANAIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLS 215
           +++A +P   A+A EA GT  QP+EQ GI+E+V  KLQ++AT+LTQERK+R R+ PEDL 
Sbjct: 141 VQAATIPQP-AVAVEAGGTAAQPMEQAGITEDVIQKLQERATVLTQERKRRGRSVPEDLM 199

Query: 216 TADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAI 275
             D++R+F+ ++S  GLHSASVPGILA+DI   DTSKILTGG D  ATVFNKDTEQVVAI
Sbjct: 200 PQDSIRSFQTLASHPGLHSASVPGILALDIHSADTSKILTGGADKNATVFNKDTEQVVAI 259

Query: 276 LKGHRKKVTRVVYHPSE 292
           LKGH KKVTRV+YHP E
Sbjct: 260 LKGHTKKVTRVIYHPEE 276

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711277|ref|XP_003394205.1| PREDICTED: pre-mRNA-processing factor 19-like [Bombus terrestris] gi|350411998|ref|XP_003489512.1| PREDICTED: pre-mRNA-processing factor 19-like [Bombus impatiens]

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/127 (69%), Positives = 104/127 (81%)

Query: 166 AIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRN 225
           A+A EA GT  QP+EQ GI+E+V  KLQ++AT+LTQERK+R R+ PEDL   D++RAF+ 
Sbjct: 150 ALAVEAGGTAAQPMEQAGITEDVIQKLQERATVLTQERKRRGRSVPEDLLPQDSIRAFQT 209

Query: 226 VSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR 285
           ++S  GLHSASVPGILA+DI   DTSKILTGG D  ATVFNKDTEQVVAILKGH KKVTR
Sbjct: 210 LASHPGLHSASVPGILALDIHSADTSKILTGGADKNATVFNKDTEQVVAILKGHTKKVTR 269

Query: 286 VVYHPSE 292
           V+YHP E
Sbjct: 270 VIYHPEE 276

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66513511|ref|XP_392284.2| PREDICTED: pre-mRNA-processing factor 19 [Apis mellifera]

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/127 (69%), Positives = 104/127 (81%)

Query: 166 AIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRN 225
           A+A EA GT  QP+EQ GI+E+V  KLQ++AT+LTQERK+R R+ PEDL   D++RAF+ 
Sbjct: 150 ALAVEAGGTAAQPMEQAGITEDVIQKLQERATVLTQERKRRGRSVPEDLLPQDSIRAFQT 209

Query: 226 VSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR 285
           ++S  GLHSASVPGILA+DI   DTSKILTGG D  ATVFNKDTEQVVAILKGH KKVTR
Sbjct: 210 LASHPGLHSASVPGILALDIHSADTSKILTGGADKNATVFNKDTEQVVAILKGHTKKVTR 269

Query: 286 VVYHPSE 292
           V+YHP E
Sbjct: 270 VIYHPEE 276

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030253|ref|XP_003698766.1| PREDICTED: pre-mRNA-processing factor 19 [Apis florea]

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/127 (69%), Positives = 104/127 (81%)

Query: 166 AIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRN 225
           A+A EA GT  QP+EQ GI+E+V  KLQ++AT+LTQERK+R R+ PEDL   D++RAF+ 
Sbjct: 150 ALAVEAGGTAAQPMEQAGITEDVIQKLQERATVLTQERKRRGRSVPEDLLPQDSIRAFQT 209

Query: 226 VSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR 285
           ++S  GLHSASVPGILA+DI   DTSKILTGG D  ATVFNKDTEQVVAILKGH KKVTR
Sbjct: 210 LASHPGLHSASVPGILALDIHSADTSKILTGGADKNATVFNKDTEQVVAILKGHTKKVTR 269

Query: 286 VVYHPSE 292
           V+YHP E
Sbjct: 270 VIYHPEE 276

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383852262|ref|XP_003701647.1| PREDICTED: pre-mRNA-processing factor 19 [Megachile rotundata]

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/127 (69%), Positives = 104/127 (81%)

Query: 166 AIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRN 225
           A+A EA GT  QP+EQ GI+E+V  KLQ++AT+LTQERK+R R+ PEDL   D++RAF+ 
Sbjct: 150 ALAVEAGGTAAQPMEQAGITEDVIQKLQERATVLTQERKRRGRSVPEDLLPQDSIRAFQT 209

Query: 226 VSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR 285
           ++S  GLHSASVPGILA+DI   DTSKILTGG D  ATVFNKDTEQVVAILKGH KKVTR
Sbjct: 210 LASHPGLHSASVPGILALDIHSADTSKILTGGADKNATVFNKDTEQVVAILKGHTKKVTR 269

Query: 286 VVYHPSE 292
           V+YHP E
Sbjct: 270 VIYHPEE 276

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
FB|FBgn0261119	505	Prp19 "Prp19" [Drosophila mela	0.431	0.251	0.677	4.6e-41
ZFIN|ZDB-GENE-030131-263	505	prp19 "PRP19/PSO4 homolog (S.	0.445	0.259	0.519	6e-32
MGI|MGI:106247	504	Prpf19 "PRP19/PSO4 pre-mRNA pr	0.411	0.240	0.561	9.8e-32
RGD|708496	504	Prpf19 "PRP19/PSO4 pre-mRNA pr	0.411	0.240	0.561	9.8e-32
UNIPROTKB|Q9JMJ4	504	Prpf19 "Pre-mRNA-processing fa	0.411	0.240	0.561	9.8e-32
UNIPROTKB|E2R8L3	513	PRPF19 "Uncharacterized protei	0.445	0.255	0.530	2.1e-31
UNIPROTKB|Q08E38	504	PRPF19 "Pre-mRNA-processing fa	0.411	0.240	0.553	2.9e-31
UNIPROTKB|Q9UMS4	504	PRPF19 "Pre-mRNA-processing fa	0.411	0.240	0.553	2.9e-31
UNIPROTKB|B2CCY7	504	PRPF19 "Nuclear matrix protein	0.411	0.240	0.553	2.9e-31
UNIPROTKB|Q5ZMA2	505	PRPF19 "Pre-mRNA-processing fa	0.445	0.259	0.496	1.3e-25

FB|FBgn0261119 Prp19 "Prp19" [Drosophila melanogaster (taxid:7227)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 86/127 (67%), Positives = 100/127 (78%)

Query:   166 AIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRN 225
             A+A+EA G    P+EQ G+S EV  KLQDKAT+LTQERKKR R  PEDL T D ++ F  
Sbjct:   151 ALASEAGGAAAHPMEQAGMSAEVIQKLQDKATVLTQERKKRGRTVPEDLVTTDQVKNFLT 210

Query:   226 VSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR 285
             V+S  GLHSASVPGILA+DI   D SKILTGGND  ATVFNKDTEQ+VAILKGH KK+T+
Sbjct:   211 VASHPGLHSASVPGILALDINSADHSKILTGGNDKNATVFNKDTEQMVAILKGHTKKITK 270

Query:   286 VVYHPSE 292
             V+YHP+E
Sbjct:   271 VIYHPNE 277

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS

GO:0005681 "spliceosomal complex" evidence=ISS;TAS

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

ZFIN|ZDB-GENE-030131-263 prp19 "PRP19/PSO4 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 68/131 (51%), Positives = 92/131 (70%)

Query:   162 PHANAIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLR 221
             P +   A  A G   +  EQ+G++ E+  KLQDKAT+LT ERKKR +  PE+L  A++L 
Sbjct:   147 PASQPAAVGAGGEAMEVSEQVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVRAEDLS 206

Query:   222 AFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRK 281
              +R V S AGLHSASVPGIL++D+   DT+K+LTGG D    VF++  EQ+VA LKGH K
Sbjct:   207 KYRQVGSHAGLHSASVPGILSLDLCPTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTK 266

Query:   282 KVTRVVYHPSE 292
             KV+ V+YHP++
Sbjct:   267 KVSSVIYHPAQ 277

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0043518 "negative regulation of DNA damage response, signal transduction by p53 class mediator" evidence=IGI;IMP

MGI|MGI:106247 Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 68/121 (56%), Positives = 87/121 (71%)

Query:   172 AGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAG 231
             AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L  +R V+S  G
Sbjct:   156 AGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVG 215

Query:   232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
             LHSAS+PGILA+D+   DT+KILTGG D    VF+K TEQ++A LKGH KKVT VV+HPS
Sbjct:   216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPS 275

Query:   292 E 292
             +
Sbjct:   276 Q 276

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=ISO

GO:0000245 "spliceosomal complex assembly" evidence=ISO

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISO

GO:0000974 "Prp19 complex" evidence=ISO

GO:0001833 "inner cell mass cell proliferation" evidence=IMP

GO:0003677 "DNA binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;ISA;IDA

GO:0005681 "spliceosomal complex" evidence=ISA;IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005811 "lipid particle" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IDA

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0016607 "nuclear speck" evidence=ISO

GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0045665 "negative regulation of neuron differentiation" evidence=IDA

GO:0045666 "positive regulation of neuron differentiation" evidence=ISA

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IMP

GO:0048711 "positive regulation of astrocyte differentiation" evidence=IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=ISO

RGD|708496 Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 68/121 (56%), Positives = 87/121 (71%)

Query:   172 AGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAG 231
             AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L  +R V+S  G
Sbjct:   156 AGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVG 215

Query:   232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
             LHSAS+PGILA+D+   DT+KILTGG D    VF+K TEQ++A LKGH KKVT VV+HPS
Sbjct:   216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPS 275

Query:   292 E 292
             +
Sbjct:   276 Q 276

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA;ISO

GO:0000245 "spliceosomal complex assembly" evidence=IEA;ISO

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISO;ISS

GO:0000974 "Prp19 complex" evidence=IEA;ISO;ISS

GO:0001833 "inner cell mass cell proliferation" evidence=IEA;ISO

GO:0003677 "DNA binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO

GO:0005634 "nucleus" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=ISO

GO:0005811 "lipid particle" evidence=IEA;ISO

GO:0005819 "spindle" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA;ISO

GO:0016607 "nuclear speck" evidence=IEA;ISO

GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO

GO:0042802 "identical protein binding" evidence=IEA;ISO

GO:0045665 "negative regulation of neuron differentiation" evidence=IEA;ISO

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA;ISO

GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA;ISO

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO

GO:0005681 "spliceosomal complex" evidence=ISO

UNIPROTKB|Q9JMJ4 Prpf19 "Pre-mRNA-processing factor 19" [Rattus norvegicus (taxid:10116)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 68/121 (56%), Positives = 87/121 (71%)

Query:   172 AGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAG 231
             AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L  +R V+S  G
Sbjct:   156 AGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVG 215

Query:   232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
             LHSAS+PGILA+D+   DT+KILTGG D    VF+K TEQ++A LKGH KKVT VV+HPS
Sbjct:   216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPS 275

Query:   292 E 292
             +
Sbjct:   276 Q 276

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0000245 "spliceosomal complex assembly" evidence=IEA

GO:0001833 "inner cell mass cell proliferation" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0045665 "negative regulation of neuron differentiation" evidence=IEA

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA

GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

UNIPROTKB|E2R8L3 PRPF19 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 346 (126.9 bits), Expect = 2.1e-31, P = 2.1e-31
 Identities = 70/132 (53%), Positives = 91/132 (68%)

Query:   161 VPHANAIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNL 220
             VP +    A  AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L
Sbjct:   155 VPSSQPSVA-GAGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEEL 213

Query:   221 RAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHR 280
               +R V+S  GLHSAS+PGILA+D+   DT+KILTGG D    VF+K +EQ++A LKGH 
Sbjct:   214 SKYRQVASHVGLHSASIPGILALDLCPADTNKILTGGADKNVVVFDKSSEQILATLKGHT 273

Query:   281 KKVTRVVYHPSE 292
             KKVT VV+HPS+
Sbjct:   274 KKVTSVVFHPSQ 285

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|Q08E38 PRPF19 "Pre-mRNA-processing factor 19" [Bos taurus (taxid:9913)]

 Score = 344 (126.2 bits), Expect = 2.9e-31, P = 2.9e-31
 Identities = 67/121 (55%), Positives = 87/121 (71%)

Query:   172 AGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAG 231
             AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L  +R V+S  G
Sbjct:   156 AGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVG 215

Query:   232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
             LHSAS+PGILA+D+   DT+KILTGG D    VF+K +EQ++A LKGH KKVT VV+HPS
Sbjct:   216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPS 275

Query:   292 E 292
             +
Sbjct:   276 Q 276

GO:0000974 "Prp19 complex" evidence=ISS

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005819 "spindle" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA

GO:0045665 "negative regulation of neuron differentiation" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0001833 "inner cell mass cell proliferation" evidence=IEA

GO:0000245 "spliceosomal complex assembly" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|Q9UMS4 PRPF19 "Pre-mRNA-processing factor 19" [Homo sapiens (taxid:9606)]

 Score = 344 (126.2 bits), Expect = 2.9e-31, P = 2.9e-31
 Identities = 67/121 (55%), Positives = 87/121 (71%)

Query:   172 AGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAG 231
             AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L  +R V+S  G
Sbjct:   156 AGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVG 215

Query:   232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
             LHSAS+PGILA+D+   DT+KILTGG D    VF+K +EQ++A LKGH KKVT VV+HPS
Sbjct:   216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPS 275

Query:   292 E 292
             +
Sbjct:   276 Q 276

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0001833 "inner cell mass cell proliferation" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0045665 "negative regulation of neuron differentiation" evidence=IEA

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA

GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0000974 "Prp19 complex" evidence=IDA

GO:0000209 "protein polyubiquitination" evidence=IDA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IDA

GO:0016607 "nuclear speck" evidence=IDA

GO:0000245 "spliceosomal complex assembly" evidence=IMP

GO:0042802 "identical protein binding" evidence=IPI

UNIPROTKB|B2CCY7 PRPF19 "Nuclear matrix protein 200" [Sus scrofa (taxid:9823)]

 Score = 344 (126.2 bits), Expect = 2.9e-31, P = 2.9e-31
 Identities = 67/121 (55%), Positives = 87/121 (71%)

Query:   172 AGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAG 231
             AG P    E +G++ E+  KLQDKAT+LT ERKKR +  PE+L   + L  +R V+S  G
Sbjct:   156 AGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVG 215

Query:   232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
             LHSAS+PGILA+D+   DT+KILTGG D    VF+K +EQ++A LKGH KKVT VV+HPS
Sbjct:   216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPS 275

Query:   292 E 292
             +
Sbjct:   276 Q 276

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA

GO:0045665 "negative regulation of neuron differentiation" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0001833 "inner cell mass cell proliferation" evidence=IEA

GO:0000974 "Prp19 complex" evidence=IEA

GO:0000245 "spliceosomal complex assembly" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|Q5ZMA2 PRPF19 "Pre-mRNA-processing factor 19" [Gallus gallus (taxid:9031)]

 Score = 295 (108.9 bits), Expect = 1.3e-25, P = 1.3e-25
 Identities = 66/133 (49%), Positives = 85/133 (63%)

Query:   161 VPHANAIAAEAAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNL 220
             VP +    A  AG      E  G++ E+  K QDKAT+LT ERKKR +  PE+L  A   
Sbjct:   146 VPSSQPNVA-GAGESMDLGELAGMTPEIIQKPQDKATVLTTERKKRGKTVPEELVEARGA 204

Query:   221 RAFRNVSSQA-GLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH 279
             +     S +  GLHSAS+PGILA+D+   DT+KILTGG D    VF+K +EQ++A LKGH
Sbjct:   205 QQVPGRSPRMWGLHSASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGH 264

Query:   280 RKKVTRVVYHPSE 292
              KKVT VV+HPS+
Sbjct:   265 SKKVTSVVFHPSQ 277

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0005819 "spindle" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q08E38	PRP19_BOVIN	No assigned EC number	0.5537	0.4115	0.2400	yes	N/A
Q9UMS4	PRP19_HUMAN	No assigned EC number	0.5537	0.4115	0.2400	yes	N/A
Q9JMJ4	PRP19_RAT	No assigned EC number	0.5619	0.4115	0.2400	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	294
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.001
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.002
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.004

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 233 HSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
           H+  V  + A      D + + +G +D    +++ +T + V  L GH   V+ V + P 
Sbjct: 50  HTGPVRDVAASA----DGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPD 104

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 248 EDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
            D  K+L+  +D    +++  T + +  L+GH   V  V + P 
Sbjct: 187 PDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPD 230

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 219 NLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGG-NDCQATVFNKDTEQVVAILK 277
           ++   + +++  G H+  V       +        +     D    +++  T + VA L 
Sbjct: 121 DVETGKCLTTLRG-HTDWV-----NSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLT 174

Query: 278 GHRKKVTRVVYHPSE 292
           GH  +V  V + P  
Sbjct: 175 GHTGEVNSVAFSPDG 189

Length = 289

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	294
KOG0289|consensus	506		99.77
KOG0272|consensus	459		98.88
KOG0271|consensus	480		98.87
KOG0263|consensus	707		98.73
KOG0286|consensus	343		98.71
KOG0276|consensus	794		98.68
KOG0266|consensus	456		98.68
KOG0279|consensus	315		98.6
KOG0264|consensus	422		98.57
KOG0270|consensus	463		98.54
KOG0266|consensus	456		98.49
PTZ00421	493	coronin; Provisional	98.45
KOG0271|consensus	480		98.39
KOG0279|consensus	315		98.38
PTZ00421	493	coronin; Provisional	98.36
KOG0285|consensus	460		98.35
KOG0263|consensus	707		98.34
KOG0275|consensus	508		98.28
PTZ00420	568	coronin; Provisional	98.28
KOG0319|consensus	775		98.27
KOG0319|consensus	775		98.24
KOG0291|consensus	893		98.22
KOG0272|consensus	459		98.21
KOG0302|consensus	440		98.21
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	98.19
KOG0285|consensus	460		98.17
KOG0318|consensus	603		98.06
KOG0284|consensus	464		98.05
KOG0284|consensus	464		98.04
KOG0282|consensus	503		98.01
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	98.0
PTZ00420	568	coronin; Provisional	97.99
KOG0322|consensus	323		97.99
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	97.98
KOG0283|consensus	712		97.98
KOG1007|consensus	370		97.96
KOG0650|consensus	733		97.95
KOG0276|consensus	794		97.95
PLN00181	793	protein SPA1-RELATED; Provisional	97.94
KOG0316|consensus	307		97.94
KOG2394|consensus	636		97.94
KOG0299|consensus	479		97.93
KOG0267|consensus	825		97.93
KOG0645|consensus	312		97.92
KOG0295|consensus	406		97.91
KOG0289|consensus	506		97.91
KOG0315|consensus	311		97.91
KOG0295|consensus	406		97.9
KOG0283|consensus	712		97.9
KOG0277|consensus	311		97.88
KOG0288|consensus	459		97.87
KOG0286|consensus	343		97.81
KOG0293|consensus	519		97.81
KOG1034|consensus	385		97.8
KOG0277|consensus	311		97.8
KOG0273|consensus	524		97.79
KOG1273|consensus	405		97.76
KOG0282|consensus	503		97.74
KOG0269|consensus	839		97.73
KOG0292|consensus	1202		97.72
KOG0267|consensus	825		97.72
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	97.71
KOG0313|consensus	423		97.71
KOG0315|consensus	311		97.68
KOG1445|consensus	1012		97.68
KOG0294|consensus	362		97.68
PLN00181	793	protein SPA1-RELATED; Provisional	97.68
KOG0273|consensus	524		97.66
KOG0281|consensus	499		97.66
KOG0293|consensus	519		97.66
KOG0294|consensus	362		97.65
KOG0973|consensus	942		97.65
KOG1407|consensus	313		97.65
KOG0292|consensus	1202		97.64
KOG0305|consensus	484		97.62
KOG0300|consensus	481		97.62
KOG0296|consensus	399		97.61
KOG0313|consensus	423		97.6
KOG0265|consensus	338		97.6
KOG0269|consensus	839		97.6
KOG0318|consensus	603		97.59
KOG0296|consensus	399		97.58
KOG0316|consensus	307		97.58
KOG0643|consensus	327		97.57
KOG0645|consensus	312		97.56
KOG0281|consensus	499		97.55
KOG4283|consensus	397		97.55
KOG0274|consensus	537		97.54
KOG0303|consensus	472		97.52
KOG0288|consensus	459		97.52
KOG0265|consensus	338		97.5
KOG0306|consensus	888		97.48
KOG1273|consensus	405		97.45
KOG0647|consensus	347		97.45
KOG0302|consensus	440		97.44
KOG0275|consensus	508		97.43
KOG4328|consensus	498		97.4
KOG0310|consensus	487		97.4
KOG0973|consensus	942		97.39
KOG0640|consensus	430		97.38
KOG0291|consensus	893		97.37
KOG0310|consensus	487		97.36
KOG1539|consensus	910		97.34
KOG0639|consensus	705		97.33
KOG0278|consensus	334		97.31
KOG0646|consensus	476		97.3
COG2319	466	FOG: WD40 repeat [General function prediction only	97.29
KOG1332|consensus	299		97.28
KOG0647|consensus	347		97.23
KOG0268|consensus	433		97.23
KOG1310|consensus	758		97.23
KOG0308|consensus	735		97.21
KOG0308|consensus	735		97.2
KOG0640|consensus	430		97.14
KOG0264|consensus	422		97.13
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	97.13
KOG0303|consensus	472		97.13
KOG0274|consensus	537		97.12
KOG1446|consensus	311		97.11
KOG0268|consensus	433		97.09
KOG0772|consensus	641		97.07
KOG2394|consensus	636		97.06
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.04
KOG0771|consensus	398		97.03
KOG2110|consensus	391		97.01
KOG0307|consensus	1049		96.98
KOG2111|consensus	346		96.97
KOG1274|consensus	933		96.95
KOG0641|consensus	350		96.93
KOG1408|consensus	1080		96.87
KOG1524|consensus	737		96.86
KOG0771|consensus	398		96.77
KOG0649|consensus	325		96.75
KOG0642|consensus	577		96.73
KOG1036|consensus	323		96.71
KOG0290|consensus	364		96.71
KOG1009|consensus	434		96.69
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	96.65
KOG1332|consensus	299		96.65
KOG0305|consensus	484		96.52
KOG1407|consensus	313		96.51
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	96.48
KOG0306|consensus	888		96.46
KOG4328|consensus	498		96.45
KOG1009|consensus	434		96.45
KOG0772|consensus	641		96.44
KOG0278|consensus	334		96.43
KOG1538|consensus	1081		96.4
KOG4283|consensus	397		96.38
KOG1188|consensus	376		96.31
KOG4714|consensus	319		96.29
KOG0643|consensus	327		96.28
KOG2445|consensus	361		96.28
KOG1408|consensus	1080		96.25
KOG0290|consensus	364		96.2
KOG1063|consensus	764		96.19
KOG0641|consensus	350		96.18
COG2319	466	FOG: WD40 repeat [General function prediction only	96.1
KOG4547|consensus	541		95.94
KOG0300|consensus	481		95.94
KOG0644|consensus	1113		95.93
KOG2096|consensus	420		95.92
KOG0301|consensus	745		95.9
KOG1445|consensus	1012		95.89
KOG0646|consensus	476		95.85
KOG0974|consensus	967		95.78
KOG0321|consensus	720		95.78
KOG1240|consensus	1431		95.73
KOG1274|consensus	933		95.63
KOG0307|consensus	1049		95.61
KOG1036|consensus	323		95.58
KOG1272|consensus	545		95.5
KOG0642|consensus	577		95.46
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	95.44
KOG0301|consensus	745		95.4
KOG1538|consensus	1081		95.32
KOG1446|consensus	311		95.22
KOG2055|consensus	514		95.1
KOG0299|consensus	479		95.03
KOG2919|consensus	406		95.02
KOG1587|consensus	555		94.98
KOG2110|consensus	391		94.9
KOG1063|consensus	764		94.75
PRK01742	429	tolB translocation protein TolB; Provisional	94.69
KOG0650|consensus	733		94.62
KOG2919|consensus	406		94.62
KOG0644|consensus	1113		94.62
KOG1539|consensus	910		94.61
KOG4378|consensus	673		94.49
KOG0270|consensus	463		94.4
KOG1587|consensus	555		94.26
KOG2106|consensus	626		94.26
KOG0649|consensus	325		94.24
KOG1334|consensus	559		94.21
KOG0639|consensus	705		94.2
KOG4378|consensus	673		94.1
KOG1523|consensus	361		94.04
KOG3914|consensus	390		93.94
PRK05137	435	tolB translocation protein TolB; Provisional	93.9
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	93.9
PRK01742	429	tolB translocation protein TolB; Provisional	93.62
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	93.46
KOG2055|consensus	514		93.36
KOG2048|consensus	691		93.35
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	93.08
KOG2096|consensus	420		92.88
KOG1523|consensus	361		92.83
KOG2139|consensus	445		92.59
KOG1188|consensus	376		92.47
KOG2079|consensus	1206		92.2
KOG1963|consensus	792		92.1
KOG1524|consensus	737		91.86
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	91.8
KOG2321|consensus	703		91.78
PRK02889	427	tolB translocation protein TolB; Provisional	91.54
KOG0280|consensus	339		91.53
KOG0322|consensus	323		91.15
KOG2445|consensus	361		90.69
KOG2041|consensus	1189		90.62
KOG2106|consensus	626		90.54
KOG1034|consensus	385		90.38
KOG1645|consensus	463		90.06
KOG1064|consensus	2439		89.47
PRK04922	433	tolB translocation protein TolB; Provisional	89.35
KOG2315|consensus	566		89.18
PRK03629	429	tolB translocation protein TolB; Provisional	89.09
KOG2139|consensus	445		89.06
KOG0321|consensus	720		88.96
KOG4532|consensus	344		88.87
PRK02889	427	tolB translocation protein TolB; Provisional	88.87
PRK00178	430	tolB translocation protein TolB; Provisional	88.46
KOG1963|consensus	792		88.19
KOG4547|consensus	541		88.11
KOG4227|consensus	609		87.88
PRK04922	433	tolB translocation protein TolB; Provisional	87.69
PRK05137	435	tolB translocation protein TolB; Provisional	87.17
PRK11028	330	6-phosphogluconolactonase; Provisional	86.92
PRK00178	430	tolB translocation protein TolB; Provisional	86.86
KOG1272|consensus	545		86.69
KOG1310|consensus	758		86.62
PRK11028	330	6-phosphogluconolactonase; Provisional	86.12
KOG3881|consensus	412		86.11
PRK03629	429	tolB translocation protein TolB; Provisional	85.23
PRK01029	428	tolB translocation protein TolB; Provisional	84.5
KOG3881|consensus	412		83.92
KOG2048|consensus	691		83.64
KOG1007|consensus	370		83.63
KOG2695|consensus	425		83.61
PRK04792	448	tolB translocation protein TolB; Provisional	83.46
KOG2314|consensus	698		83.42
KOG1334|consensus	559		83.18
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	83.06
KOG2066|consensus	846		82.6
KOG0280|consensus	339		81.69
KOG1832|consensus	1516		81.24
KOG4190|consensus	1034		80.77
KOG1409|consensus	404		80.75

>KOG0289|consensus

Probab=99.77  E-value=5.5e-19  Score=173.59  Aligned_cols=118  Identities=51%  Similarity=0.765  Sum_probs=110.8

Q ss_pred             cCCCCCCcccCCCCCHHHHHHHHHHHHHHhhhhcccCCCCCCCCCChhhhccccccccccCCcCCCCCCEEEEEeccCCC
Q psy12461        171 AAGTPNQPVEQIGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDT  250 (294)
Q Consensus       171 ~~g~aMev~ee~GLPeeVI~kL~etak~LSs~RKKRgK~vPe~LAS~E~Iksyk~tsS~p~lHSas~pGIlSLdfSpsDg  250 (294)
                      ++|+.|+   ..||.++++++++++++.|++.||||||+.|++|++.+++..|.+.++++++|++..++|++++..++ .
T Consensus       156 a~ge~~d---~~g~s~~i~~~l~~~aq~ls~~rKkrg~k~p~~la~~d~~~~~~q~ash~gLH~t~~pgi~ald~~~s-~  231 (506)
T KOG0289|consen  156 AAGESED---QPGLSPEIIQKLEDKAQVLSQERKKRGKKLPEKLATTDELSCLLQVASHTGLHSTSTPGITALDIIPS-S  231 (506)
T ss_pred             hcCCccc---cccCCHHHHHHHHHHHHHHHHHhhhccccCCcccccHHHHHHHHhcCCCcceeccCCCCeeEEeecCC-C
Confidence            3455554   57999999999999999999999999999999999999999999999999999999999999999985 7


Q ss_pred             CEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        251 SKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       251 nlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +.++|||.|+++.|||..+++++.+|+||+++|++|.|||+.
T Consensus       232 ~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~  273 (506)
T KOG0289|consen  232 SKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDL  273 (506)
T ss_pred             CcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccch
Confidence            899999999999999999999999999999999999999975

>KOG0272|consensus

Probab=98.88  E-value=1.6e-09  Score=106.99  Aligned_cols=102  Identities=24%  Similarity=0.354  Sum_probs=81.8

Q ss_pred             HHHHHHHHHHHHHHhhhhcccCCCCCCC--CCChh---hhccccccccccCC-cCCCCCCEEEEEeccCCCCEEEEecCC
Q psy12461        186 EEVQAKLQDKATILTQERKKRSRAAPED--LSTAD---NLRAFRNVSSQAGL-HSASVPGILAMDIQVEDTSKILTGGND  259 (294)
Q Consensus       186 eeVI~kL~etak~LSs~RKKRgK~vPe~--LAS~E---~Iksyk~tsS~p~l-HSas~pGIlSLdfSpsDgnlLATGG~D  259 (294)
                      ++.|+.++.+-..+++.+     +-|.+  |+|+.   +.+-|+..+....+ ...+..+|.+++|++ ||++++|||.|
T Consensus       251 e~~l~~l~gH~~RVs~Va-----fHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~-DGSL~~tGGlD  324 (459)
T KOG0272|consen  251 ETPLQDLEGHLARVSRVA-----FHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQP-DGSLAATGGLD  324 (459)
T ss_pred             Ccchhhhhcchhhheeee-----ecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecC-CCceeeccCcc
Confidence            477888998888887765     66776  66665   44555555432222 233567899999998 89999999999


Q ss_pred             CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        260 CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       260 GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...+|||+++++++..|.||.+.|.+|.|+|++-
T Consensus       325 ~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy  358 (459)
T KOG0272|consen  325 SLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGY  358 (459)
T ss_pred             chhheeecccCcEEEEecccccceeeEeECCCce
Confidence            9999999999999999999999999999999874

>KOG0271|consensus

Probab=98.87  E-value=4.3e-09  Score=103.61  Aligned_cols=73  Identities=27%  Similarity=0.376  Sum_probs=60.9

Q ss_pred             Chhhhcccccc----ccccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        216 TADNLRAFRNV----SSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       216 S~E~Iksyk~t----sS~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .++++..-+..    ++++ .|   ...|.|++|+| ++..||||+.|.|+++||+.|+..+.|.+||...|.||+|+||
T Consensus        94 qpqavfrvrpvtrCssS~~-GH---~e~Vl~~~fsp-~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPD  168 (480)
T KOG0271|consen   94 QPQAVFRVRPVTRCSSSIA-GH---GEAVLSVQFSP-TGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPD  168 (480)
T ss_pred             ccchhhcccccceeccccC-CC---CCcEEEEEecC-CCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCC
Confidence            45555554433    3332 44   45699999999 7999999999999999999999999999999999999999999


Q ss_pred             CC
Q psy12461        292 EL  293 (294)
Q Consensus       292 ~~  293 (294)
                      ++
T Consensus       169 gk  170 (480)
T KOG0271|consen  169 GK  170 (480)
T ss_pred             cc
Confidence            85

>KOG0263|consensus

Probab=98.73  E-value=1.3e-08  Score=105.51  Aligned_cols=58  Identities=19%  Similarity=0.385  Sum_probs=54.2

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +...|.|++||| +.+|+||||.|.+|++||+.+|..++.|.||+.+|++|+|+|++++
T Consensus       534 hlsDV~cv~FHP-Ns~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~  591 (707)
T KOG0263|consen  534 HLSDVDCVSFHP-NSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRY  591 (707)
T ss_pred             cccccceEEECC-cccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCce
Confidence            346799999999 5999999999999999999999999999999999999999999874

>KOG0286|consensus

Probab=98.71  E-value=2.6e-08  Score=95.47  Aligned_cols=57  Identities=21%  Similarity=0.459  Sum_probs=54.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+|+++|++++.++|||.|++++|||++.+.++++|.||...|++|.|+|++.
T Consensus       186 ~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~  242 (343)
T KOG0286|consen  186 TGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGD  242 (343)
T ss_pred             cccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCC
Confidence            567999999998899999999999999999999999999999999999999999863

>KOG0276|consensus

Probab=98.68  E-value=1.2e-08  Score=105.06  Aligned_cols=81  Identities=22%  Similarity=0.457  Sum_probs=68.4

Q ss_pred             CCCCCChh---hhccccccccccCC-cCCCCCCEEEEEeccC-CCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEE
Q psy12461        211 PEDLSTAD---NLRAFRNVSSQAGL-HSASVPGILAMDIQVE-DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR  285 (294)
Q Consensus       211 Pe~LAS~E---~Iksyk~tsS~p~l-HSas~pGIlSLdfSps-DgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtS  285 (294)
                      +..+|++.   +|+-|..-++.+.+ -.++..||+|+++-+. |..|++||+.|.+|+|||++|.+|++||+||+..|..
T Consensus       153 ~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~  232 (794)
T KOG0276|consen  153 PNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSF  232 (794)
T ss_pred             ccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceE
Confidence            56688775   88889888776543 2356889999998862 3349999999999999999999999999999999999


Q ss_pred             EEECCC
Q psy12461        286 VVYHPS  291 (294)
Q Consensus       286 VaFhPd  291 (294)
                      +.|||.
T Consensus       233 v~fhp~  238 (794)
T KOG0276|consen  233 VFFHPE  238 (794)
T ss_pred             EEecCC
Confidence            999995

>KOG0266|consensus

Probab=98.68  E-value=5.3e-08  Score=95.16  Aligned_cols=73  Identities=18%  Similarity=0.337  Sum_probs=60.3

Q ss_pred             hhccccccccc---cCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        219 NLRAFRNVSSQ---AGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       219 ~Iksyk~tsS~---p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .|+.|+.....   ..+ ..|...|++++|+| +++++++|+.|++|+|||+.+++++.+|++|+..|++++|+++++
T Consensus       226 tiriwd~~~~~~~~~~l-~gH~~~v~~~~f~p-~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~  301 (456)
T KOG0266|consen  226 TLRIWDLKDDGRNLKTL-KGHSTYVTSVAFSP-DGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGN  301 (456)
T ss_pred             eEEEeeccCCCeEEEEe-cCCCCceEEEEecC-CCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCC
Confidence            56666662221   112 13467899999999 579999999999999999999999999999999999999999876

>KOG0279|consensus

Probab=98.60  E-value=5.1e-08  Score=92.84  Aligned_cols=56  Identities=18%  Similarity=0.198  Sum_probs=53.4

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..|..+++++ |+++.+|++.|+++++||+.+++..+.|.||++.|.+|+|+||++|
T Consensus        64 H~v~dv~~s~-dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~q  119 (315)
T KOG0279|consen   64 HFVSDVVLSS-DGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQ  119 (315)
T ss_pred             eEecceEEcc-CCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCce
Confidence            4699999998 8999999999999999999999999999999999999999999987

>KOG0264|consensus

Probab=98.57  E-value=1.2e-07  Score=93.91  Aligned_cols=57  Identities=14%  Similarity=0.281  Sum_probs=52.5

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +...|+|++|+|.+..+|||||.|++|+|||+++ .+++.+|++|...|.+|.|+|..
T Consensus       271 h~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~  328 (422)
T KOG0264|consen  271 HSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHN  328 (422)
T ss_pred             cCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCC
Confidence            3568999999998888999999999999999998 46899999999999999999975

>KOG0270|consensus

Probab=98.54  E-value=4.8e-08  Score=97.05  Aligned_cols=57  Identities=23%  Similarity=0.349  Sum_probs=52.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+....++|||||.|+||++||+.++++..+++.|+++|.++.|||..-
T Consensus       243 Tdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p  299 (463)
T KOG0270|consen  243 TDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEP  299 (463)
T ss_pred             hHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCc
Confidence            567899999976788999999999999999999999999999999999999999753

>KOG0266|consensus

Probab=98.49  E-value=3.3e-07  Score=89.64  Aligned_cols=56  Identities=27%  Similarity=0.468  Sum_probs=52.4

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeC-CCcceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNK-DTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDl-eTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +..+|.+++|+| ++.++++|+.|++++|||+ ..+.++++|+||+..|++++|+|++
T Consensus       202 h~~~v~~~~fs~-d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g  258 (456)
T KOG0266|consen  202 HTRGVSDVAFSP-DGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG  258 (456)
T ss_pred             cccceeeeEECC-CCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCC
Confidence            467899999999 7999999999999999999 5669999999999999999999987

>PTZ00421 coronin; Provisional

Probab=98.45  E-value=5.4e-07  Score=90.12  Aligned_cols=57  Identities=12%  Similarity=0.265  Sum_probs=52.5

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+|+|+|...++|+||+.|++|+|||+++++.+.++++|...|++++|+|+++
T Consensus       125 ~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~  181 (493)
T PTZ00421        125 TKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGS  181 (493)
T ss_pred             CCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCC
Confidence            457999999995457999999999999999999999999999999999999999875

>KOG0271|consensus

Probab=98.39  E-value=4.8e-07  Score=89.45  Aligned_cols=83  Identities=16%  Similarity=0.215  Sum_probs=66.9

Q ss_pred             CCCCCCChh---hhccccccccccCC--cCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEE
Q psy12461        210 APEDLSTAD---NLRAFRNVSSQAGL--HSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVT  284 (294)
Q Consensus       210 vPe~LAS~E---~Iksyk~tsS~p~l--HSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVt  284 (294)
                      .+|.++++.   ++.-|.+..+...+  -..+..-|+.+.|+| |+.||||++-|+.|++||-++||.+.+|.||-.+|.
T Consensus       335 ~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSP-d~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VY  413 (480)
T KOG0271|consen  335 SGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSP-DGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVY  413 (480)
T ss_pred             CcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECC-CccEEEEeecccceeeeeCCCcchhhhhhhccceeE
Confidence            468888776   45556655543111  012356799999999 899999999999999999999999999999999999


Q ss_pred             EEEECCCCC
Q psy12461        285 RVVYHPSEL  293 (294)
Q Consensus       285 SVaFhPd~~  293 (294)
                      .|+|+.|.+
T Consensus       414 qvawsaDsR  422 (480)
T KOG0271|consen  414 QVAWSADSR  422 (480)
T ss_pred             EEEeccCcc
Confidence            999999854

>KOG0279|consensus

Probab=98.38  E-value=5.8e-07  Score=85.76  Aligned_cols=57  Identities=18%  Similarity=0.197  Sum_probs=52.9

Q ss_pred             CCCEEEEEeccCC-CCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVED-TSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsD-gnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..-|+|+.|+|+. ..+|+++|.|++|+|||+++.++.+++-||++-|+.|+++||+.
T Consensus       148 ~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGs  205 (315)
T KOG0279|consen  148 REWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGS  205 (315)
T ss_pred             cCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCC
Confidence            5679999999963 56899999999999999999999999999999999999999975

>PTZ00421 coronin; Provisional

Probab=98.36  E-value=1.3e-06  Score=87.49  Aligned_cols=56  Identities=29%  Similarity=0.396  Sum_probs=49.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-------ceEEEeccCCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-------QVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-------KvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ...|++++|+|.++++|+||+.|++|+|||+.++       +.+.+|.+|+++|.+|+|+|+.
T Consensus        75 ~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~  137 (493)
T PTZ00421         75 EGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSA  137 (493)
T ss_pred             CCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCC
Confidence            4579999999966789999999999999999765       3578899999999999999975

>KOG0285|consensus

Probab=98.35  E-value=6.8e-07  Score=87.92  Aligned_cols=74  Identities=23%  Similarity=0.460  Sum_probs=61.0

Q ss_pred             hhcccccccc--ccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        219 NLRAFRNVSS--QAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       219 ~Iksyk~tsS--~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .|+.|++...  +..+| .+-.+|.||+++|+ -+.|+|||.|.+++|||+++..-+.+|.||+.+|++|.+.|.+-|
T Consensus       216 ~VKCwDLe~nkvIR~Yh-GHlS~V~~L~lhPT-ldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpq  291 (460)
T KOG0285|consen  216 QVKCWDLEYNKVIRHYH-GHLSGVYCLDLHPT-LDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQ  291 (460)
T ss_pred             eeEEEechhhhhHHHhc-cccceeEEEecccc-ceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCc
Confidence            5677776543  22233 34679999999995 679999999999999999999999999999999999999876543

>KOG0263|consensus

Probab=98.34  E-value=6.3e-07  Score=93.34  Aligned_cols=56  Identities=14%  Similarity=0.217  Sum_probs=53.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+|+|+| +|.+||||+.|+.|+|||+.+++.+.+|.+|+..|+++.|+.++.
T Consensus       577 ~~~V~al~~Sp-~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~  632 (707)
T KOG0263|consen  577 KGPVTALAFSP-CGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGN  632 (707)
T ss_pred             CCceEEEEEcC-CCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCC
Confidence            56799999999 799999999999999999999999999999999999999999874

>KOG0275|consensus

Probab=98.28  E-value=2.9e-07  Score=89.94  Aligned_cols=57  Identities=21%  Similarity=0.344  Sum_probs=53.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-cCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-GHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-GHTkkVtSVaFhPd~~Q  294 (294)
                      ...|+|++|+. |..++|||+.||.|+||-+++|+|++.|. .|++-|+|+.|+.|++|
T Consensus       263 d~aVlci~FSR-DsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~Sq  320 (508)
T KOG0275|consen  263 DDAVLCISFSR-DSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQ  320 (508)
T ss_pred             ccceEEEeecc-cHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcch
Confidence            45799999997 89999999999999999999999999998 89999999999999886

>PTZ00420 coronin; Provisional

Probab=98.28  E-value=2.6e-06  Score=87.19  Aligned_cols=57  Identities=23%  Similarity=0.404  Sum_probs=49.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--------eEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--------VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--------vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++++|+|.++++|||||.|++|+|||+.++.        ++.+|.+|..+|++|+|||++.
T Consensus        74 ~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~  138 (568)
T PTZ00420         74 TSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNY  138 (568)
T ss_pred             CCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCC
Confidence            56799999999557899999999999999997642        4567899999999999999764

>KOG0319|consensus

Probab=98.27  E-value=1.1e-06  Score=91.63  Aligned_cols=56  Identities=21%  Similarity=0.360  Sum_probs=52.1

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      |...|+||+++| +..+|||||.|++++||+++..+++.+|.||+..|+||.|+|..
T Consensus       462 HdKdIN~Vaia~-ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~d  517 (775)
T KOG0319|consen  462 HDKDINCVAIAP-NDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKND  517 (775)
T ss_pred             hcccccceEecC-CCceEEecccccceeeecccCceEEEEeeCCccceEEEEecccc
Confidence            456899999999 47899999999999999999999999999999999999999864

>KOG0319|consensus

Probab=98.24  E-value=1.9e-06  Score=90.02  Aligned_cols=60  Identities=17%  Similarity=0.258  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        234 SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       234 Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +.|..||-||.|++. ..++||+|.|+||+||.+++..|+.||+||+..|..+.|-.+++|
T Consensus       502 sGH~RGvw~V~Fs~~-dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~q  561 (775)
T KOG0319|consen  502 SGHTRGVWCVSFSKN-DQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQ  561 (775)
T ss_pred             eCCccceEEEEeccc-cceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcE
Confidence            456899999999984 679999999999999999999999999999999999999887765

>KOG0291|consensus

Probab=98.22  E-value=2.5e-06  Score=89.61  Aligned_cols=57  Identities=21%  Similarity=0.261  Sum_probs=53.3

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      |.+.|+|++++| |+.+||||+.||.|+|||..++-|..||..|+..|+.|.|+..++
T Consensus       349 H~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~  405 (893)
T KOG0291|consen  349 HSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGN  405 (893)
T ss_pred             cccceeeEEECC-CCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCC
Confidence            457899999999 899999999999999999999999999999999999999987654

>KOG0272|consensus

Probab=98.21  E-value=3.8e-06  Score=83.59  Aligned_cols=93  Identities=18%  Similarity=0.297  Sum_probs=66.9

Q ss_pred             HHHhhhhcccCCCCCCCCC-ChhhhccccccccccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEE
Q psy12461        197 TILTQERKKRSRAAPEDLS-TADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAI  275 (294)
Q Consensus       197 k~LSs~RKKRgK~vPe~LA-S~E~Iksyk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~T  275 (294)
                      ..|.+.|..+.++.++... ..+.++........ +........|..+.|+. |++.||||+.+|.++||+..+...+++
T Consensus       135 ~Rl~k~re~~e~p~~~~~~~~~~~~k~~~~~~l~-~SQ~gd~rPis~~~fS~-ds~~laT~swsG~~kvW~~~~~~~~~~  212 (459)
T KOG0272|consen  135 LRLQKARERREIPDTEKALSRKEALKHLQSLELV-CSQVGDTRPISGCSFSR-DSKHLATGSWSGLVKVWSVPQCNLLQT  212 (459)
T ss_pred             HHHHHHHHhhcCCcchhhhHHHHHHHHhhhhhhh-hhhccCCCcceeeEeec-CCCeEEEeecCCceeEeecCCcceeEE
Confidence            4466666555333333322 33344443332211 12234456799999997 799999999999999999999999999


Q ss_pred             eccCCCcEEEEEECCC
Q psy12461        276 LKGHRKKVTRVVYHPS  291 (294)
Q Consensus       276 LkGHTkkVtSVaFhPd  291 (294)
                      |.||+..|.++.|||.
T Consensus       213 l~gH~~~v~~~~fhP~  228 (459)
T KOG0272|consen  213 LRGHTSRVGAAVFHPV  228 (459)
T ss_pred             EeccccceeeEEEccC
Confidence            9999999999999997

>KOG0302|consensus

Probab=98.21  E-value=2.3e-06  Score=84.41  Aligned_cols=56  Identities=21%  Similarity=0.394  Sum_probs=50.1

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC---cceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDT---EQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT---gKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +..-|+-|+|+. +-.+||+|+.||+++|||+++   ++++++|+-|..+|++|.|||..
T Consensus       301 h~sDVNVISWnr-~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e  359 (440)
T KOG0302|consen  301 HNSDVNVISWNR-REPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHE  359 (440)
T ss_pred             cCCceeeEEccC-CcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEecccc
Confidence            456799999997 466999999999999999985   67999999999999999999864

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=98.19  E-value=7e-06  Score=66.74  Aligned_cols=56  Identities=23%  Similarity=0.354  Sum_probs=51.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|+.+++||+.+++.+..+.+|...++++.|+|+++
T Consensus         9 ~~~i~~~~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   64 (289)
T cd00200           9 TGGVTCVAFSP-DGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGT   64 (289)
T ss_pred             CCCEEEEEEcC-CCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCC
Confidence            45799999998 689999999999999999999999999999999999999999863

>KOG0285|consensus

Probab=98.17  E-value=3.6e-06  Score=82.96  Aligned_cols=74  Identities=15%  Similarity=0.176  Sum_probs=58.3

Q ss_pred             CCCCChhhhccccccccccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        212 EDLSTADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       212 e~LAS~E~Iksyk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ..+..|+==.-|++.... ..|   ..-|.||++.|. ..+|+||+.|++++|||+.++++..+|.||-.-|..|++++
T Consensus       130 ~~~~rPeWHapwKl~rVi-~gH---lgWVr~vavdP~-n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~  203 (460)
T KOG0285|consen  130 SRMPRPEWHAPWKLYRVI-SGH---LGWVRSVAVDPG-NEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSK  203 (460)
T ss_pred             ccCCCccccCcceehhhh-hhc---cceEEEEeeCCC-ceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecc
Confidence            334444433335544433 234   678999999994 78999999999999999999999999999999999999976

>KOG0318|consensus

Probab=98.06  E-value=1.1e-05  Score=82.27  Aligned_cols=57  Identities=19%  Similarity=0.317  Sum_probs=53.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec---cCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK---GHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk---GHTkkVtSVaFhPd~~Q  294 (294)
                      ..-|+|+.|+| |++++||.|.||+|.|||=.+++.+..|.   +|.+.|.+++|+||+.|
T Consensus       190 skFV~~VRysP-DG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~  249 (603)
T KOG0318|consen  190 SKFVNCVRYSP-DGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQ  249 (603)
T ss_pred             ccceeeEEECC-CCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCce
Confidence            45799999999 79999999999999999999999999998   99999999999999876

>KOG0284|consensus

Probab=98.05  E-value=3.3e-06  Score=83.92  Aligned_cols=84  Identities=17%  Similarity=0.297  Sum_probs=63.8

Q ss_pred             CCCCC--CCChh---hhccccccccccC-CcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCc
Q psy12461        209 AAPED--LSTAD---NLRAFRNVSSQAG-LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKK  282 (294)
Q Consensus       209 ~vPe~--LAS~E---~Iksyk~tsS~p~-lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkk  282 (294)
                      +.|.+  +++..   .|+.|...-..+. .-+++---|.|++|+|+ ..+|||||.|..|++||.++++|+.+|-+|..-
T Consensus       188 fSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~-kgLiasgskDnlVKlWDprSg~cl~tlh~HKnt  266 (464)
T KOG0284|consen  188 FSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPT-KGLIASGSKDNLVKLWDPRSGSCLATLHGHKNT  266 (464)
T ss_pred             cCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCc-cceeEEccCCceeEeecCCCcchhhhhhhccce
Confidence            44544  55543   5666655443220 01222345999999995 779999999999999999999999999999999


Q ss_pred             EEEEEECCCCC
Q psy12461        283 VTRVVYHPSEL  293 (294)
Q Consensus       283 VtSVaFhPd~~  293 (294)
                      |.+|.|.|++.
T Consensus       267 Vl~~~f~~n~N  277 (464)
T KOG0284|consen  267 VLAVKFNPNGN  277 (464)
T ss_pred             EEEEEEcCCCC
Confidence            99999999864

>KOG0284|consensus

Probab=98.04  E-value=2.1e-06  Score=85.30  Aligned_cols=71  Identities=28%  Similarity=0.450  Sum_probs=59.3

Q ss_pred             hhccccccccc--cCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        219 NLRAFRNVSSQ--AGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       219 ~Iksyk~tsS~--p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      -|+-|++.+..  -++| .++..|+.+.|++ ++++|+|+|.|.+++|||+++.+.+.++++|.+.|+++.|||-
T Consensus       245 lVKlWDprSg~cl~tlh-~HKntVl~~~f~~-n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~  317 (464)
T KOG0284|consen  245 LVKLWDPRSGSCLATLH-GHKNTVLAVKFNP-NGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPL  317 (464)
T ss_pred             eeEeecCCCcchhhhhh-hccceEEEEEEcC-CCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccc
Confidence            45666666542  1233 2467899999999 5899999999999999999999999999999999999999994

>KOG0282|consensus

Probab=98.01  E-value=1.9e-06  Score=86.52  Aligned_cols=59  Identities=22%  Similarity=0.360  Sum_probs=54.3

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCCCcEEEEEECCCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+..+|+++.|.|..+.+|+|||.|+.|+|||+.. +++++||.||+++|.++.|++++.
T Consensus       212 gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~  271 (503)
T KOG0282|consen  212 GHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGT  271 (503)
T ss_pred             CCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCC
Confidence            45789999999996689999999999999999976 899999999999999999999875

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=98.00  E-value=2.9e-05  Score=63.10  Aligned_cols=56  Identities=23%  Similarity=0.388  Sum_probs=50.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|++ ++.++++++.|+.+++||+.+++.+..+.+|...|+++.|+|+++
T Consensus       219 ~~~i~~~~~~~-~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  274 (289)
T cd00200         219 ENGVNSVAFSP-DGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGK  274 (289)
T ss_pred             CCceEEEEEcC-CCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCC
Confidence            45799999998 588899998899999999999999999999999999999999854

>PTZ00420 coronin; Provisional

Probab=97.99  E-value=1.9e-05  Score=80.87  Aligned_cols=56  Identities=13%  Similarity=0.148  Sum_probs=48.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+|+|+|....+|+|||.|++|+|||+++++.+.++. |...|++++|+|+++
T Consensus       125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~  180 (568)
T PTZ00420        125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGN  180 (568)
T ss_pred             CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCC
Confidence            45799999999533456899999999999999999888887 568899999999875

>KOG0322|consensus

Probab=97.99  E-value=7.1e-06  Score=78.36  Aligned_cols=59  Identities=27%  Similarity=0.373  Sum_probs=55.0

Q ss_pred             CcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       232 lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .|....|||..+.+-| |++++||+|.|+.|+||.+++.+.++.|+-|++.|++|+|+|+
T Consensus       246 e~~lknpGv~gvrIRp-D~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd  304 (323)
T KOG0322|consen  246 EITLKNPGVSGVRIRP-DGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPD  304 (323)
T ss_pred             eEEecCCCccceEEcc-CCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCC
Confidence            3455678999999998 8999999999999999999999999999999999999999998

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=97.98  E-value=1.4e-05  Score=51.62  Aligned_cols=29  Identities=17%  Similarity=0.275  Sum_probs=26.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEe
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFN  266 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWD  266 (294)
                      ...|.+|+|+| ++++|+||+.|++|+|||
T Consensus        11 ~~~i~~i~~~~-~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen   11 SSSINSIAWSP-DGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             SSSEEEEEEET-TSSEEEEEETTSEEEEEE
T ss_pred             CCcEEEEEEec-ccccceeeCCCCEEEEEC
Confidence            46799999999 689999999999999998

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG0283|consensus

Probab=97.98  E-value=8.5e-06  Score=85.34  Aligned_cols=53  Identities=17%  Similarity=0.339  Sum_probs=49.2

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      |...|+.|+|+.  .++|+|++.|+||+||++...+|+++|. |..-||||+|||-
T Consensus       368 Ht~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPv  420 (712)
T KOG0283|consen  368 HTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPV  420 (712)
T ss_pred             cchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEeccc
Confidence            466899999996  6899999999999999999999999998 9999999999994

>KOG1007|consensus

Probab=97.96  E-value=8.4e-06  Score=78.74  Aligned_cols=76  Identities=18%  Similarity=0.264  Sum_probs=58.6

Q ss_pred             hhccccccccc--cCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCCCcEEEEEECCCCCC
Q psy12461        219 NLRAFRNVSSQ--AGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       219 ~Iksyk~tsS~--p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ++..|.+.+-.  ..+-.++..-|..|+|+|+...+|+|||.|+.|+|||.+. ...+.+|.+|+..|++|.|+|.-.|
T Consensus       194 tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdq  272 (370)
T KOG1007|consen  194 TLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQ  272 (370)
T ss_pred             cEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccce
Confidence            55555554321  1223444566999999997677899999999999999985 5689999999999999999996443

>KOG0650|consensus

Probab=97.95  E-value=2e-05  Score=81.52  Aligned_cols=76  Identities=14%  Similarity=0.251  Sum_probs=62.9

Q ss_pred             CCCChhhhccccccccc-cCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        213 DLSTADNLRAFRNVSSQ-AGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       213 ~LAS~E~Iksyk~tsS~-p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .|.++.+++-|-..-.. ..+|   ..-|.||+.+| .+.+||+||.||+|+||.+.|+.|+.++.-. ..|.||+|+|.
T Consensus       378 kLPsp~dLrPFPt~~~lvyrGH---tg~Vr~iSvdp-~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-~~I~~vaw~P~  452 (733)
T KOG0650|consen  378 KLPSPKDLRPFPTRCALVYRGH---TGLVRSISVDP-SGEWLASGSDDGTVRIWEIATGRCVRTVQFD-SEIRSVAWNPL  452 (733)
T ss_pred             cCCChhhcCCCcceeeeeEecc---CCeEEEEEecC-CcceeeecCCCCcEEEEEeecceEEEEEeec-ceeEEEEecCC
Confidence            47789999888765442 2245   56799999999 5999999999999999999999999988754 47999999997


Q ss_pred             CC
Q psy12461        292 EL  293 (294)
Q Consensus       292 ~~  293 (294)
                      .+
T Consensus       453 ~~  454 (733)
T KOG0650|consen  453 SD  454 (733)
T ss_pred             CC
Confidence            54

>KOG0276|consensus

Probab=97.95  E-value=1.3e-05  Score=83.10  Aligned_cols=66  Identities=17%  Similarity=0.189  Sum_probs=56.6

Q ss_pred             ccccccccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        223 FRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       223 yk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      |.+.... ..|   ..-|++++|+|.|.+.+||++-|+||+||.+.+..+..||+||.+-|+||.|-+-+
T Consensus       130 wa~~qtf-eGH---~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~g  195 (794)
T KOG0276|consen  130 WACEQTF-EGH---EHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGG  195 (794)
T ss_pred             eeeeeEE-cCc---ceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCC
Confidence            4444433 245   45799999999999999999999999999999999999999999999999997654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=97.94  E-value=2.3e-05  Score=81.10  Aligned_cols=54  Identities=17%  Similarity=0.217  Sum_probs=49.6

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ..|.+++|++.++++||||+.|++|+|||+.+++.+.++++|++.|++++|+|.
T Consensus       533 ~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~  586 (793)
T PLN00181        533 SKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSA  586 (793)
T ss_pred             CceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCC
Confidence            468899998756789999999999999999999999999999999999999973

>KOG0316|consensus

Probab=97.94  E-value=1.1e-05  Score=76.42  Aligned_cols=75  Identities=19%  Similarity=0.319  Sum_probs=61.6

Q ss_pred             ChhhhccccccccccCCcC--CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        216 TADNLRAFRNVSSQAGLHS--ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       216 S~E~Iksyk~tsS~p~lHS--as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +..+|+-|.+.... .+|.  .+-..|+.++.+. |+..|++||.|+.|.+||+.||++++.|.||.+.|+.|.|+.+.
T Consensus        37 sdrtvrLWNp~rg~-liktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNees  113 (307)
T KOG0316|consen   37 SDRTVRLWNPLRGA-LIKTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEES  113 (307)
T ss_pred             CCceEEeecccccc-eeeeecCCCceeeeccccc-cccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcc
Confidence            33477888877653 2332  2445799999886 78899999999999999999999999999999999999998764

>KOG2394|consensus

Probab=97.94  E-value=1.6e-05  Score=81.24  Aligned_cols=53  Identities=34%  Similarity=0.493  Sum_probs=51.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ..|.+||+|+| |++||+|||.|-.|.||.....++|+.=.||..+|+.|+|.|
T Consensus       332 FGGLLCvcWSP-DGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  332 FGGLLCVCWSP-DGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             ccceEEEEEcC-CccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence            47899999999 899999999999999999999999999999999999999986

>KOG0299|consensus

Probab=97.93  E-value=2.1e-05  Score=78.85  Aligned_cols=54  Identities=30%  Similarity=0.543  Sum_probs=50.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|+++++++ |+.||||||.|..|.|||.++.+.+++|+||.++|.+++|.-.
T Consensus       202 ~keil~~avS~-Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~g  255 (479)
T KOG0299|consen  202 VKEILTLAVSS-DGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKG  255 (479)
T ss_pred             cceeEEEEEcC-CCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecC
Confidence            56799999998 8999999999999999999999999999999999999999653

>KOG0267|consensus

Probab=97.93  E-value=4.1e-06  Score=87.66  Aligned_cols=56  Identities=20%  Similarity=0.344  Sum_probs=51.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+|-||.|++ +..+|+.|.+||+|++||+++++++++|.||...+++|.|||-+.
T Consensus        70 espIeSl~f~~-~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~  125 (825)
T KOG0267|consen   70 ESPIESLTFDT-SERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGE  125 (825)
T ss_pred             CCcceeeecCc-chhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceE
Confidence            55799999997 578999999999999999999999999999999999999999653

>KOG0645|consensus

Probab=97.92  E-value=2.5e-05  Score=74.68  Aligned_cols=59  Identities=17%  Similarity=0.265  Sum_probs=52.9

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc--ceEEEeccCCCcEEEEEECCCCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE--QVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg--KvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +++..|.+++|+| .++|||+|+-|.++.||--..+  +++.+|+||...|-+|+|++++++
T Consensus        59 ~hkrsVRsvAwsp-~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~  119 (312)
T KOG0645|consen   59 GHKRSVRSVAWSP-HGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNY  119 (312)
T ss_pred             cchheeeeeeecC-CCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCE
Confidence            3477899999999 6999999999999999988654  689999999999999999999863

>KOG0295|consensus

Probab=97.91  E-value=1.2e-05  Score=78.95  Aligned_cols=57  Identities=16%  Similarity=0.310  Sum_probs=51.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|+.+-|+| +-.++++++.|++|++||+.|++++++|+||++.|.+|+|+..+++
T Consensus       108 r~~vt~v~~hp-~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~  164 (406)
T KOG0295|consen  108 RSSVTRVIFHP-SEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKY  164 (406)
T ss_pred             ccceeeeeecc-CceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccE
Confidence            34699999999 5778999999999999999999999999999999999999988764

>KOG0289|consensus

Probab=97.91  E-value=1.6e-05  Score=79.61  Aligned_cols=54  Identities=17%  Similarity=0.212  Sum_probs=50.8

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      -++++.+||| |+.+|.+|..|+.++|||+.++..+..|.||+++|.+++|+.+|
T Consensus       348 v~~ts~~fHp-DgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENG  401 (506)
T KOG0289|consen  348 VEYTSAAFHP-DGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENG  401 (506)
T ss_pred             ceeEEeeEcC-CceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCc
Confidence            3589999999 89999999999999999999999999999999999999999765

>KOG0315|consensus

Probab=97.91  E-value=2.9e-05  Score=73.80  Aligned_cols=57  Identities=19%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-ceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-QVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-KvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..-|+.+-+|| |.+||||+|.|++++||+.++. +....++||...|++++|+.|+.+
T Consensus       215 ~~~il~C~lSP-d~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~Y  272 (311)
T KOG0315|consen  215 NGHILRCLLSP-DVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEY  272 (311)
T ss_pred             cceEEEEEECC-CCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccE
Confidence            34599999999 8999999999999999999998 888899999999999999998764

>KOG0295|consensus

Probab=97.90  E-value=2.2e-05  Score=77.23  Aligned_cols=55  Identities=18%  Similarity=0.222  Sum_probs=52.0

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      +...|..++|+| .|.||+|+..|++++|||+.+.+++.+++.|...|+++.||.+
T Consensus       333 hdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~  387 (406)
T KOG0295|consen  333 HDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKT  387 (406)
T ss_pred             ccceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCC
Confidence            367899999999 6999999999999999999999999999999999999999875

>KOG0283|consensus

Probab=97.90  E-value=1.6e-05  Score=83.38  Aligned_cols=73  Identities=15%  Similarity=0.182  Sum_probs=57.3

Q ss_pred             hhccccccccccCCcCC-CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        219 NLRAFRNVSSQAGLHSA-SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       219 ~Iksyk~tsS~p~lHSa-s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +++-|.+... .+|+-. |..-|+||+|+|.|.+||+||+.|+.|+||++...+++.-..-+ +-|++|+|.|+|+
T Consensus       391 TVRLWh~~~~-~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~-~lITAvcy~PdGk  464 (712)
T KOG0283|consen  391 TVRLWHPGRK-ECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR-DLITAVCYSPDGK  464 (712)
T ss_pred             cEEeecCCCc-ceeeEEecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhh-hhheeEEeccCCc
Confidence            5555555432 233221 35779999999999999999999999999999999987755544 8899999999976

>KOG0277|consensus

Probab=97.88  E-value=1.9e-05  Score=75.15  Aligned_cols=55  Identities=24%  Similarity=0.291  Sum_probs=50.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-ceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-QVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-KvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|+|++|+..+.++++|||.|+.|++||+++- ..+..|.||.-.|..|+|+|.
T Consensus       190 ~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph  245 (311)
T KOG0277|consen  190 NSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPH  245 (311)
T ss_pred             cceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcc
Confidence            3579999999888899999999999999999985 578899999999999999995

>KOG0288|consensus

Probab=97.87  E-value=2.6e-05  Score=77.64  Aligned_cols=54  Identities=17%  Similarity=0.214  Sum_probs=49.0

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCc--EEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKK--VTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkk--VtSVaFhPd~~  293 (294)
                      ..+.+.||| ++.|+|+||.||.|+||++.++++...++.-+..  |++++|+|.++
T Consensus       389 DwtrvvfSp-d~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~  444 (459)
T KOG0288|consen  389 DWTRVVFSP-DGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGS  444 (459)
T ss_pred             ccceeEECC-CCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCc
Confidence            478899999 7999999999999999999999999999876655  99999999875

>KOG0286|consensus

Probab=97.81  E-value=0.0001  Score=71.16  Aligned_cols=57  Identities=25%  Similarity=0.299  Sum_probs=52.1

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +...|.+++|++ |.+.|+|++.||.+.|||.-|...++-++--+.+|..++|+|+++
T Consensus        54 H~~Ki~~~~ws~-Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~  110 (343)
T KOG0286|consen   54 HLNKIYAMDWST-DSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGN  110 (343)
T ss_pred             cccceeeeEecC-CcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCC
Confidence            367799999998 899999999999999999988887888888899999999999875

>KOG0293|consensus

Probab=97.81  E-value=3.7e-05  Score=76.98  Aligned_cols=53  Identities=23%  Similarity=0.453  Sum_probs=46.0

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      |..-+|-..+..+||||+.|+.|+||+..+++++..|.||++.|++|+|+|..
T Consensus       442 iIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~  494 (519)
T KOG0293|consen  442 IIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPAD  494 (519)
T ss_pred             EEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCC
Confidence            44444554456899999999999999999999999999999999999999964

>KOG1034|consensus

Probab=97.80  E-value=3.6e-05  Score=75.16  Aligned_cols=57  Identities=21%  Similarity=0.339  Sum_probs=52.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe---ccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL---KGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL---kGHTkkVtSVaFhPd~~  293 (294)
                      -..|+.|.++|.++++|+|++.|.+|++||++++.++..|   +||...|.+|.|++++.
T Consensus       135 G~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd  194 (385)
T KOG1034|consen  135 GGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGD  194 (385)
T ss_pred             CccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCC
Confidence            4569999999988889999999999999999999998876   78999999999999875

>KOG0277|consensus

Probab=97.80  E-value=2.8e-05  Score=74.03  Aligned_cols=56  Identities=14%  Similarity=0.280  Sum_probs=52.2

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      +...|.+++|++.++..+++++.|+||||||..-.+-++||+||..-|..++|+|.
T Consensus       103 H~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~  158 (311)
T KOG0277|consen  103 HKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPH  158 (311)
T ss_pred             hhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCC
Confidence            35789999999987888999999999999999999999999999999999999995

>KOG0273|consensus

Probab=97.79  E-value=2.9e-05  Score=78.35  Aligned_cols=75  Identities=13%  Similarity=0.211  Sum_probs=59.3

Q ss_pred             hhccccccccccCCcCC--CCCCEEEEEeccC--------CCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEE
Q psy12461        219 NLRAFRNVSSQAGLHSA--SVPGILAMDIQVE--------DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVY  288 (294)
Q Consensus       219 ~Iksyk~tsS~p~lHSa--s~pGIlSLdfSps--------DgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaF  288 (294)
                      +++.|....+. ..|..  +...|..+.|+|.        .+..+|+++.|.+|++||+..+.++++|..|+.+|.+|+|
T Consensus       382 TlkiWs~~~~~-~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvaf  460 (524)
T KOG0273|consen  382 TLKIWSMGQSN-SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAF  460 (524)
T ss_pred             eeEeeecCCCc-chhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEe
Confidence            77777755432 23332  3456777777763        4568999999999999999999999999999999999999


Q ss_pred             CCCCCC
Q psy12461        289 HPSELQ  294 (294)
Q Consensus       289 hPd~~Q  294 (294)
                      +|++++
T Consensus       461 S~~g~y  466 (524)
T KOG0273|consen  461 SPNGRY  466 (524)
T ss_pred             cCCCcE
Confidence            999864

>KOG1273|consensus

Probab=97.76  E-value=3.2e-05  Score=75.47  Aligned_cols=54  Identities=11%  Similarity=0.168  Sum_probs=51.1

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      -.+|+.|++ .|.++|.|-.||.|.|||..|-.+-+.|.+|..+|++++|+++++
T Consensus        25 ~a~~~~Fs~-~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr   78 (405)
T KOG1273|consen   25 LAECCQFSR-WGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGR   78 (405)
T ss_pred             ccceEEecc-CcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCC
Confidence            378999998 699999999999999999999999999999999999999999986

>KOG0282|consensus

Probab=97.74  E-value=3.5e-05  Score=77.68  Aligned_cols=52  Identities=25%  Similarity=0.420  Sum_probs=49.2

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      -..|+||| |+.+|++|..||.+.+||..+-+++.+|+.|+++|+.+.|||..
T Consensus       435 s~~v~fSp-DG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e  486 (503)
T KOG0282|consen  435 SCQVDFSP-DGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVE  486 (503)
T ss_pred             eeeEEEcC-CCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCC
Confidence            56789999 89999999999999999999999999999999999999999964

>KOG0269|consensus

Probab=97.73  E-value=4.8e-05  Score=80.20  Aligned_cols=57  Identities=18%  Similarity=0.283  Sum_probs=46.5

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ++...|.|++|+| ++.+|||||-|+.|+|||..+.+  .+.++.. ..+|.+|.|.|..+
T Consensus       218 AH~GpV~c~nwhP-nr~~lATGGRDK~vkiWd~t~~~~~~~~tInT-iapv~rVkWRP~~~  276 (839)
T KOG0269|consen  218 AHNGPVLCLNWHP-NREWLATGGRDKMVKIWDMTDSRAKPKHTINT-IAPVGRVKWRPARS  276 (839)
T ss_pred             cccCceEEEeecC-CCceeeecCCCccEEEEeccCCCccceeEEee-cceeeeeeeccCcc
Confidence            3466799999999 79999999999999999998654  3444432 47999999999864

>KOG0292|consensus

Probab=97.72  E-value=5.8e-05  Score=81.00  Aligned_cols=56  Identities=21%  Similarity=0.370  Sum_probs=52.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      -.-|..+.||+ .-.+|+|+|.|.||+||++++.++++.|.||..-|.|.+|||.+.
T Consensus        93 lDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptED  148 (1202)
T KOG0292|consen   93 LDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTED  148 (1202)
T ss_pred             cceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccc
Confidence            57799999998 478999999999999999999999999999999999999999653

>KOG0267|consensus

Probab=97.72  E-value=3.1e-05  Score=81.29  Aligned_cols=78  Identities=18%  Similarity=0.276  Sum_probs=62.0

Q ss_pred             CCChhhhccccccc-cccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        214 LSTADNLRAFRNVS-SQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       214 LAS~E~Iksyk~ts-S~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      |.+.-+++.|+... .....-.++..+|.++.|+| ++.++++|+.|.+++|||+..|+++..|++|+.+|.++.|||.+
T Consensus       130 gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP-~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e  208 (825)
T KOG0267|consen  130 GSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSP-DGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLE  208 (825)
T ss_pred             ccccccceehhhhccCceeeecCCcceeEEEeecC-CCceeeccCCcceeeeecccccccccccccccccccccccCchh
Confidence            44555677776652 11001122467899999999 79999999999999999999999999999999999999999953

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=97.71  E-value=0.00011  Score=64.66  Aligned_cols=55  Identities=9%  Similarity=0.125  Sum_probs=46.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGND---CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...++.+.|+| ++++||+||.+   |.+.+||.++.+.+.+++.  ..++.+.|+|++++
T Consensus       100 ~~~~n~i~wsP-~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~--~~~t~~~WsPdGr~  157 (194)
T PF08662_consen  100 TQPRNTISWSP-DGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEH--SDATDVEWSPDGRY  157 (194)
T ss_pred             CCCceEEEECC-CCCEEEEEEccCCCcEEEEEECCCCEEeecccc--CcEEEEEEcCCCCE
Confidence            34688999999 69999998754   5699999999999988764  35899999999974

>KOG0313|consensus

Probab=97.71  E-value=3.8e-05  Score=75.94  Aligned_cols=74  Identities=14%  Similarity=0.228  Sum_probs=56.8

Q ss_pred             hhccccccccccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc---eEEEeccCCCcEEEEEECCCCC
Q psy12461        219 NLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ---VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       219 ~Iksyk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK---vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +|+.|++...---.--.....++|++.+| ..++||+|+.|..++|||.+++.   +.++|-||+..|.+|.|+|.+-
T Consensus       282 TIk~WDletg~~~~~~~~~ksl~~i~~~~-~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~  358 (423)
T KOG0313|consen  282 TIKVWDLETGGLKSTLTTNKSLNCISYSP-LSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNE  358 (423)
T ss_pred             eEEEEEeecccceeeeecCcceeEeeccc-ccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCc
Confidence            56667665432100011335689999998 68999999999999999999864   5669999999999999999754

>KOG0315|consensus

Probab=97.68  E-value=7.4e-05  Score=71.17  Aligned_cols=72  Identities=19%  Similarity=0.337  Sum_probs=55.3

Q ss_pred             hhccccccccccC-C--cCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        219 NLRAFRNVSSQAG-L--HSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       219 ~Iksyk~tsS~p~-l--HSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      -|+-|+..+..+. .  -..+...|+++.|.. ++.++.|||.||+++|||++.-.+-+.|+ |..+|++|..||..
T Consensus        62 hvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQ  136 (311)
T KOG0315|consen   62 HVRLYDLNSNNPNPVATFEGHTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQ  136 (311)
T ss_pred             eeEEEEccCCCCCceeEEeccCCceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCc
Confidence            4666666554431 0  122356899999997 79999999999999999999977666665 66999999999964

>KOG1445|consensus

Probab=97.68  E-value=2.2e-05  Score=82.01  Aligned_cols=58  Identities=10%  Similarity=0.232  Sum_probs=53.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|.+|.|+|--.++||+++.|-||+|||+++++.-..|.||++-|.+++|+|++++
T Consensus       677 ~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~  734 (1012)
T KOG1445|consen  677 GEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRR  734 (1012)
T ss_pred             cceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcc
Confidence            4569999999965789999999999999999999999999999999999999999985

>KOG0294|consensus

Probab=97.68  E-value=7.3e-05  Score=72.72  Aligned_cols=57  Identities=19%  Similarity=0.344  Sum_probs=51.2

Q ss_pred             cCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        233 HSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       233 HSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ++++...|++|+++   +.|+||||.|-+|+|||+++.+-+.+|-.|++.|+++.|.+.-
T Consensus        39 ~~aH~~sitavAVs---~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~   95 (362)
T KOG0294|consen   39 FSAHAGSITALAVS---GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPL   95 (362)
T ss_pred             ccccccceeEEEec---ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCc
Confidence            34556789999998   5799999999999999999999999999999999999998753

>PLN00181 protein SPA1-RELATED; Provisional

Probab=97.68  E-value=0.00015  Score=75.15  Aligned_cols=54  Identities=11%  Similarity=0.275  Sum_probs=48.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|.+|+|+|.++++|+|||.|++|+|||+.+++++.++..| ..|+++.|++.
T Consensus       575 ~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~  628 (793)
T PLN00181        575 EKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSE  628 (793)
T ss_pred             CCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCC
Confidence            5679999999767889999999999999999999999999876 68999999653

>KOG0273|consensus

Probab=97.66  E-value=7.1e-05  Score=75.60  Aligned_cols=56  Identities=14%  Similarity=0.230  Sum_probs=52.3

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      |...|++|.|+|+ +.+|+|++.|+|++||......+...|.+|++.|..+.|+|.+
T Consensus       358 H~g~V~alk~n~t-g~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g  413 (524)
T KOG0273|consen  358 HHGEVNALKWNPT-GSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTG  413 (524)
T ss_pred             ccCceEEEEECCC-CceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCC
Confidence            3567999999994 9999999999999999999999999999999999999999976

>KOG0281|consensus

Probab=97.66  E-value=1.5e-05  Score=78.77  Aligned_cols=68  Identities=13%  Similarity=0.378  Sum_probs=57.6

Q ss_pred             hhccccccccc--cCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        219 NLRAFRNVSSQ--AGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       219 ~Iksyk~tsS~--p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      +|+.|...+..  ..+| +++.||-|+.+.   +.++++|+.|.+|+|||++.|.+++.|+||..-|.++.|..
T Consensus       341 TikvW~~st~efvRtl~-gHkRGIAClQYr---~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd~  410 (499)
T KOG0281|consen  341 TIKVWSTSTCEFVRTLN-GHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN  410 (499)
T ss_pred             eEEEEeccceeeehhhh-cccccceehhcc---CeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeecC
Confidence            78888776643  1233 457899999986   58999999999999999999999999999999999999975

>KOG0293|consensus

Probab=97.66  E-value=0.00011  Score=73.74  Aligned_cols=58  Identities=12%  Similarity=0.270  Sum_probs=52.0

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc---ceEEEeccCCCcEEEEEECCCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE---QVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg---KvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +...|--+.||+ +|.|+||++.|.|+.||++...   ++.+||.||..+|..+.|+||.+|
T Consensus       223 htdEVWfl~FS~-nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdry  283 (519)
T KOG0293|consen  223 HTDEVWFLQFSH-NGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRY  283 (519)
T ss_pred             CCCcEEEEEEcC-CCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCe
Confidence            357899999998 6999999999999999998643   568899999999999999999875

>KOG0294|consensus

Probab=97.65  E-value=9.9e-05  Score=71.81  Aligned_cols=76  Identities=20%  Similarity=0.354  Sum_probs=58.3

Q ss_pred             hhhhcccccccccc-CCcCCCCCCEEEEEeccCCCC--EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        217 ADNLRAFRNVSSQA-GLHSASVPGILAMDIQVEDTS--KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       217 ~E~Iksyk~tsS~p-~lHSas~pGIlSLdfSpsDgn--lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .|+|..|+...... +.-..+...|++|.|.+ ..+  .|++|+.||.|.+||...=.++.+|++|++.|+.++.||.++
T Consensus        62 DetI~IYDm~k~~qlg~ll~HagsitaL~F~~-~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~K  140 (362)
T KOG0294|consen   62 DETIHIYDMRKRKQLGILLSHAGSITALKFYP-PLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGK  140 (362)
T ss_pred             CCcEEEEeccchhhhcceeccccceEEEEecC-CcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCc
Confidence            35666666554311 11111345799999997 233  799999999999999999999999999999999999999875

>KOG0973|consensus

Probab=97.65  E-value=5.7e-05  Score=81.18  Aligned_cols=58  Identities=21%  Similarity=0.339  Sum_probs=54.3

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      |...|..|.|+| ++.++||+|.|++|.|||..+.+.+.+|+||...|-.|.|.|-+++
T Consensus       128 H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky  185 (942)
T KOG0973|consen  128 HDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKY  185 (942)
T ss_pred             CCCccceeccCC-CccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCe
Confidence            356799999999 7999999999999999999999999999999999999999998875

>KOG1407|consensus

Probab=97.65  E-value=6.7e-05  Score=71.66  Aligned_cols=58  Identities=12%  Similarity=0.158  Sum_probs=53.9

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ++..+..|+.|+| ++.|+|+|++|..+-|||++.--|++.+.-|.-+|..+.|+-+++
T Consensus       187 AH~snCicI~f~p-~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~  244 (313)
T KOG1407|consen  187 AHPSNCICIEFDP-DGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGR  244 (313)
T ss_pred             cCCcceEEEEECC-CCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcc
Confidence            3467899999999 799999999999999999999999999999999999999999876

>KOG0292|consensus

Probab=97.64  E-value=5.5e-05  Score=81.16  Aligned_cols=55  Identities=24%  Similarity=0.393  Sum_probs=51.3

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      +...|..++||| ...+++|||.|..|+||++.+.+|+.||.||-+-|..+.||+.
T Consensus        50 HdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHhe  104 (1202)
T KOG0292|consen   50 HDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHE  104 (1202)
T ss_pred             cCCccceeeecC-CCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCC
Confidence            456799999999 5889999999999999999999999999999999999999974

>KOG0305|consensus

Probab=97.62  E-value=7.8e-05  Score=75.48  Aligned_cols=56  Identities=14%  Similarity=0.265  Sum_probs=52.1

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +...|..|.|++ |+.++|+||+|+.+.|||......+.++..|++.|-+++|+|..
T Consensus       300 H~qeVCgLkws~-d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q  355 (484)
T KOG0305|consen  300 HRQEVCGLKWSP-DGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQ  355 (484)
T ss_pred             ccceeeeeEECC-CCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCc
Confidence            356899999998 89999999999999999999889999999999999999999964

>KOG0300|consensus

Probab=97.62  E-value=0.00017  Score=70.86  Aligned_cols=56  Identities=20%  Similarity=0.292  Sum_probs=51.5

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +..||--++.... ..++.|++.|.+++||.+++++|+.++.||++.|+++.||+++
T Consensus       147 HkDGiW~Vaa~~t-qpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~  202 (481)
T KOG0300|consen  147 HKDGIWHVAADST-QPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSG  202 (481)
T ss_pred             cccceeeehhhcC-CcceeecccccceeEEeeccccceeeecccccceeeEEecccc
Confidence            3789999998864 5699999999999999999999999999999999999999975

>KOG0296|consensus

Probab=97.61  E-value=0.00012  Score=72.18  Aligned_cols=72  Identities=15%  Similarity=0.217  Sum_probs=59.8

Q ss_pred             hhccccccccccCCcCC-CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        219 NLRAFRNVSSQAGLHSA-SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       219 ~Iksyk~tsS~p~lHSa-s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .|..|...++.+ -|.. +..+|+.|-|-+  ..+|+|+..||+|++||.++|+++.++.||+..|.+.+++|+.+
T Consensus       309 ~i~iyD~a~~~~-R~~c~he~~V~~l~w~~--t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~  381 (399)
T KOG0296|consen  309 TIAIYDLAASTL-RHICEHEDGVTKLKWLN--TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKR  381 (399)
T ss_pred             eEEEEecccchh-heeccCCCceEEEEEcC--cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCc
Confidence            566676665432 2222 467899999986  57999999999999999999999999999999999999999865

>KOG0313|consensus

Probab=97.60  E-value=7.1e-05  Score=74.03  Aligned_cols=56  Identities=13%  Similarity=0.232  Sum_probs=50.9

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc-eEEEeccCCCcEEEEEECCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ-VVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK-vV~TLkGHTkkVtSVaFhPd  291 (294)
                      |..-|.+|.|+|.+..+|++|+-|+++++||+++.+ .+.++.+|..+|.+|.|...
T Consensus       344 H~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~  400 (423)
T KOG0313|consen  344 HKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG  400 (423)
T ss_pred             chhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC
Confidence            345699999999888889999999999999999887 99999999999999999864

>KOG0265|consensus

Probab=97.60  E-value=0.00015  Score=70.18  Aligned_cols=57  Identities=21%  Similarity=0.243  Sum_probs=51.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeC-CCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNK-DTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDl-eTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|..+.|+| ++.+|||||.|..|.||+. ...+-..+++||+.+|..|.|.+|+++
T Consensus        47 ~geI~~~~F~P-~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~  104 (338)
T KOG0265|consen   47 KGEIYTIKFHP-DGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSH  104 (338)
T ss_pred             cceEEEEEECC-CCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCE
Confidence            56799999999 7999999999999999995 456677789999999999999998864

>KOG0269|consensus

Probab=97.60  E-value=5.9e-05  Score=79.53  Aligned_cols=56  Identities=9%  Similarity=0.306  Sum_probs=52.6

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      +...|++|+|++..+++|+|||.|++|++||++..+-..++.+.+..|.+|+|+|.
T Consensus       132 H~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~  187 (839)
T KOG0269|consen  132 HERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPG  187 (839)
T ss_pred             hccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccC
Confidence            36789999999988999999999999999999999999999999999999999985

>KOG0318|consensus

Probab=97.59  E-value=0.00013  Score=74.74  Aligned_cols=56  Identities=14%  Similarity=0.239  Sum_probs=49.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEE-eccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAI-LKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~T-LkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+++| |+.|||+|...+.|.+||+++.+.... +.-|+.+|++++|+|++.
T Consensus       487 ~a~iT~vaySp-d~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~  543 (603)
T KOG0318|consen  487 RAAITDVAYSP-DGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNK  543 (603)
T ss_pred             cCCceEEEECC-CCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCce
Confidence            56799999999 899999999999999999999887443 344999999999999874

>KOG0296|consensus

Probab=97.58  E-value=0.00018  Score=70.91  Aligned_cols=56  Identities=21%  Similarity=0.379  Sum_probs=52.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|-+++++| +.+++||||.|-.+.|||+.++..+..+.||...|+++.|+-++.
T Consensus        64 ~~svFavsl~P-~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fshdgt  119 (399)
T KOG0296|consen   64 TDSVFAVSLHP-NNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGT  119 (399)
T ss_pred             CCceEEEEeCC-CCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCce
Confidence            45699999999 689999999999999999999999999999999999999998763

>KOG0316|consensus

Probab=97.58  E-value=0.00016  Score=68.69  Aligned_cols=57  Identities=19%  Similarity=0.262  Sum_probs=52.3

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+..|.++.|+- +++|++|+|.|++|++|+.-.+.+++++.||...|.+++.+-|+.
T Consensus        16 ~qgaV~avryN~-dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dns   72 (307)
T KOG0316|consen   16 AQGAVRAVRYNV-DGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNS   72 (307)
T ss_pred             cccceEEEEEcc-CCCEEEEcCCCceEEeecccccceeeeecCCCceeeecccccccc
Confidence            356799999997 899999999999999999999999999999999999998877664

>KOG0643|consensus

Probab=97.57  E-value=0.00019  Score=68.94  Aligned_cols=55  Identities=24%  Similarity=0.346  Sum_probs=49.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|-|++++- +.+.++||++|.+++|||+.+|+++++++-. .+|..|.|++++.
T Consensus        52 tGavW~~Did~-~s~~liTGSAD~t~kLWDv~tGk~la~~k~~-~~Vk~~~F~~~gn  106 (327)
T KOG0643|consen   52 TGAVWCCDIDW-DSKHLITGSADQTAKLWDVETGKQLATWKTN-SPVKRVDFSFGGN  106 (327)
T ss_pred             CceEEEEEecC-CcceeeeccccceeEEEEcCCCcEEEEeecC-CeeEEEeeccCCc
Confidence            56799999986 6899999999999999999999999999964 7899999999875

>KOG0645|consensus

Probab=97.56  E-value=0.00022  Score=68.39  Aligned_cols=57  Identities=19%  Similarity=0.391  Sum_probs=50.9

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc---ceEEEeccCCCcEEEEEECCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE---QVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg---KvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      .+...|.|++|++ +++||||++-|+.|=||.+..+   .++..|++|+..|--|.|||..
T Consensus       103 GHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~  162 (312)
T KOG0645|consen  103 GHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTE  162 (312)
T ss_pred             ccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCc
Confidence            3467899999998 6999999999999999999743   5899999999999999999953

>KOG0281|consensus

Probab=97.55  E-value=6.7e-05  Score=74.19  Aligned_cols=51  Identities=18%  Similarity=0.330  Sum_probs=47.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ...|+||+|..   .+|+||+.|.||+|||+++++++.+|-+|...|..+.|+.
T Consensus       237 tGSVLCLqyd~---rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~n  287 (499)
T KOG0281|consen  237 TGSVLCLQYDE---RVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN  287 (499)
T ss_pred             CCcEEeeeccc---eEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeC
Confidence            45699999984   5999999999999999999999999999999999999975

>KOG4283|consensus

Probab=97.55  E-value=0.00016  Score=70.29  Aligned_cols=61  Identities=18%  Similarity=0.263  Sum_probs=47.4

Q ss_pred             CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-ceEEEe--------------ccCCCcEEEEEECCCCCC
Q psy12461        234 SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-QVVAIL--------------KGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       234 Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-KvV~TL--------------kGHTkkVtSVaFhPd~~Q  294 (294)
                      +.+..+|++++|+|...=+|+|||.|+.|++||++.. .+..+|              ..|..+|+.++|.-+++|
T Consensus       185 sGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~  260 (397)
T KOG4283|consen  185 SGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARY  260 (397)
T ss_pred             ccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchh
Confidence            4468899999999953335789999999999999764 344444              356678999999988765

>KOG0274|consensus

Probab=97.54  E-value=0.00016  Score=73.67  Aligned_cols=52  Identities=15%  Similarity=0.330  Sum_probs=47.4

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      +...|.|+.++   ++++++|+.|++|+|||+.+++++++|+||+.+|.++.+.+
T Consensus       330 h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~  381 (537)
T KOG0274|consen  330 HTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDS  381 (537)
T ss_pred             ccccEEEEEec---CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecC
Confidence            45679999997   57999999999999999999999999999999999998876

>KOG0303|consensus

Probab=97.52  E-value=0.00011  Score=73.15  Aligned_cols=55  Identities=25%  Similarity=0.424  Sum_probs=48.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-------ceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-------QVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-------KvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|+.++|+|-+.+.|||||.|.+|.||++-.+       +.+..|.||+++|--|+|||.
T Consensus        81 t~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPt  142 (472)
T KOG0303|consen   81 TAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPT  142 (472)
T ss_pred             cccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeeccc
Confidence            4569999999988889999999999999998654       357789999999999999995

>KOG0288|consensus

Probab=97.52  E-value=7.5e-05  Score=74.49  Aligned_cols=106  Identities=20%  Similarity=0.287  Sum_probs=75.0

Q ss_pred             CCCCHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCh---hhhccccccccccCCcCC---CCCCEEEEEeccCCCCEEEE
Q psy12461        182 IGISEEVQAKLQDKATILTQERKKRSRAAPEDLSTA---DNLRAFRNVSSQAGLHSA---SVPGILAMDIQVEDTSKILT  255 (294)
Q Consensus       182 ~GLPeeVI~kL~etak~LSs~RKKRgK~vPe~LAS~---E~Iksyk~tsS~p~lHSa---s~pGIlSLdfSpsDgnlLAT  255 (294)
                      +-||......++.+--+.-..+=-+   ..+.|+++   +.|+.|.....-..+|++   ...+|++++|.+ ++..+++
T Consensus       161 ~~lpS~~~~~ld~h~gev~~v~~l~---~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~-~~~~~iA  236 (459)
T KOG0288|consen  161 DTLPSRALFVLDAHEGEVHDVEFLR---NSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDS-DNKHVIA  236 (459)
T ss_pred             cccchhhhhhhhccccccceeEEcc---CcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecC-CCceEEe
Confidence            3477777776665543332222111   12345544   367777766543334543   345699999998 6888999


Q ss_pred             ecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        256 GGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       256 GG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .++|+++++|++.+.++..||.||+.+|+++.|.-.
T Consensus       237 as~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~  272 (459)
T KOG0288|consen  237 ASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLS  272 (459)
T ss_pred             ecCCCceeeeeccchhhhhhhcccccceeeehhhcc
Confidence            999999999999999999999999999999988654

>KOG0265|consensus

Probab=97.50  E-value=0.00021  Score=69.23  Aligned_cols=56  Identities=16%  Similarity=0.261  Sum_probs=51.8

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      -.++++.|.. .++.+.+||.|+.|++||++.+.++++++||.++|+.+..+|++.+
T Consensus       175 yqltAv~f~d-~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~  230 (338)
T KOG0265|consen  175 YQLTAVGFKD-TSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSF  230 (338)
T ss_pred             eeEEEEEecc-cccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCc
Confidence            4689999997 5889999999999999999999999999999999999999998753

>KOG0306|consensus

Probab=97.48  E-value=0.00014  Score=76.94  Aligned_cols=53  Identities=26%  Similarity=0.391  Sum_probs=50.5

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      =+|.|++++| |+++|+|||+|++|+||-++=|.|-++|=+|.+.|.+|.|-|.
T Consensus       551 LPV~smDIS~-DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~  603 (888)
T KOG0306|consen  551 LPVLSMDISP-DSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPK  603 (888)
T ss_pred             cceeEEeccC-CcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEccc
Confidence            3599999999 8999999999999999999999999999999999999999995

>KOG1273|consensus

Probab=97.45  E-value=0.00023  Score=69.65  Aligned_cols=57  Identities=21%  Similarity=0.231  Sum_probs=51.1

Q ss_pred             CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        234 SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       234 Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +++...|.||+||+ |+.+|+|++.|..|++||+..|.+++.+.- ..+|+.+.|||-.
T Consensus        62 saH~~pi~sl~WS~-dgr~LltsS~D~si~lwDl~~gs~l~rirf-~spv~~~q~hp~k  118 (405)
T KOG1273|consen   62 SAHVRPITSLCWSR-DGRKLLTSSRDWSIKLWDLLKGSPLKRIRF-DSPVWGAQWHPRK  118 (405)
T ss_pred             hccccceeEEEecC-CCCEeeeecCCceeEEEeccCCCceeEEEc-cCccceeeecccc
Confidence            55578899999998 899999999999999999999999998774 4899999999964

>KOG0647|consensus

Probab=97.45  E-value=0.00018  Score=69.81  Aligned_cols=60  Identities=15%  Similarity=0.214  Sum_probs=49.2

Q ss_pred             CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEE-EeccCCCcEEEEEECCCCC
Q psy12461        234 SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVA-ILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       234 Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~-TLkGHTkkVtSVaFhPd~~  293 (294)
                      +.+...|.+|+|||....+++.|+.|++|++|+++. ++.+- ....|.++|.+|+|+.|+.
T Consensus        24 ~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsddgs   85 (347)
T KOG0647|consen   24 NPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGS   85 (347)
T ss_pred             CCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCc
Confidence            334567999999996677888999999999999986 45443 4667999999999998864

>KOG0302|consensus

Probab=97.44  E-value=0.00018  Score=71.43  Aligned_cols=54  Identities=9%  Similarity=0.193  Sum_probs=47.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc---ceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE---QVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg---KvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|-.|+|||+..++|||||.|++|+|||++.+   .++.+ +.|...|+-|.|+..
T Consensus       257 ~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sDVNVISWnr~  313 (440)
T KOG0302|consen  257 TKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSDVNVISWNRR  313 (440)
T ss_pred             ccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCCceeeEEccCC
Confidence            4568899999988899999999999999999988   45555 999999999999864

>KOG0275|consensus

Probab=97.43  E-value=4.9e-05  Score=74.72  Aligned_cols=58  Identities=17%  Similarity=0.320  Sum_probs=54.4

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ++..||+||.|+. |++.|+++|.|.+|+|--+.+|+++..|+||+..|+.+.|.+++.
T Consensus       304 AHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~  361 (508)
T KOG0275|consen  304 AHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGH  361 (508)
T ss_pred             hhccCeeEEEEcc-CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCC
Confidence            4467999999997 899999999999999999999999999999999999999999875

>KOG4328|consensus

Probab=97.40  E-value=0.00016  Score=72.82  Aligned_cols=55  Identities=16%  Similarity=0.199  Sum_probs=46.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc--c---eEEEeccCCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE--Q---VVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg--K---vV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ...|.+|+++|..+.+|||+|.|++++|||++.-  +   ++.+ -.|+..|+++.|+|++
T Consensus       322 ~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst-~~HrrsV~sAyFSPs~  381 (498)
T KOG4328|consen  322 KKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLST-LPHRRSVNSAYFSPSG  381 (498)
T ss_pred             hcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceec-ccccceeeeeEEcCCC
Confidence            4479999999988889999999999999999863  2   2444 4599999999999985

>KOG0310|consensus

Probab=97.40  E-value=0.00035  Score=70.62  Aligned_cols=58  Identities=21%  Similarity=0.233  Sum_probs=50.8

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-ceEEEeccCCCcEEEEEECCCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ++...|.|.+|+|.++.+++|||-||+|++||.++. ..+.+|. |..+|-+|.|-|.++
T Consensus       151 ~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs  209 (487)
T KOG0310|consen  151 GHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGS  209 (487)
T ss_pred             CCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEEEcCCCC
Confidence            447789999999987889999999999999999887 6777776 788999999999865

>KOG0973|consensus

Probab=97.39  E-value=0.00028  Score=76.00  Aligned_cols=57  Identities=23%  Similarity=0.417  Sum_probs=50.4

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-------c-----------ceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-------E-----------QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-------g-----------KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +...|+|+-|++ |+.|||+||.|+.|.||++..       +           +++.+|.+|...|.+|.|+|+++
T Consensus        68 h~~sv~CVR~S~-dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~  142 (942)
T KOG0973|consen   68 HDGSVNCVRFSP-DGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS  142 (942)
T ss_pred             ccCceeEEEECC-CCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc
Confidence            355699999999 799999999999999999983       1           27889999999999999999865

>KOG0640|consensus

Probab=97.38  E-value=0.00024  Score=69.61  Aligned_cols=56  Identities=23%  Similarity=0.357  Sum_probs=49.4

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC------------------cceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDT------------------EQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT------------------gKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ++..+.+-+|++ ||.++||||.|..|+|+|.+.                  --+++||-.|...|+++.|||-.
T Consensus       111 HK~~cR~aafs~-DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre  184 (430)
T KOG0640|consen  111 HKSPCRAAAFSP-DGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE  184 (430)
T ss_pred             cccceeeeeeCC-CCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence            456789999998 899999999999999999871                  13799999999999999999954

>KOG0291|consensus

Probab=97.37  E-value=0.00031  Score=74.38  Aligned_cols=78  Identities=21%  Similarity=0.334  Sum_probs=62.3

Q ss_pred             CCCCChhhhccccccccccCCcCCCCCCEEEEEeccCCCCEEEEecCC-CcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        212 EDLSTADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGND-CQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       212 e~LAS~E~Iksyk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG~D-GTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ++-+.+.++++|..-.+..   ...+-.-.||+..|+ +.+++.|+.| -.|.||+++||+++-.|.||.+||.++.|+|
T Consensus       413 DGtVRAwDlkRYrNfRTft---~P~p~QfscvavD~s-GelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~  488 (893)
T KOG0291|consen  413 DGTVRAWDLKRYRNFRTFT---SPEPIQFSCVAVDPS-GELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSP  488 (893)
T ss_pred             CCeEEeeeecccceeeeec---CCCceeeeEEEEcCC-CCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEcc
Confidence            4455666777776655432   333446789999994 8888889888 5899999999999999999999999999999


Q ss_pred             CCC
Q psy12461        291 SEL  293 (294)
Q Consensus       291 d~~  293 (294)
                      +++
T Consensus       489 ~~~  491 (893)
T KOG0291|consen  489 DGS  491 (893)
T ss_pred             ccC
Confidence            864

>KOG0310|consensus

Probab=97.36  E-value=0.00043  Score=69.95  Aligned_cols=58  Identities=19%  Similarity=0.234  Sum_probs=52.7

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ++..|..+-|+|.++..+++|+.|+.+++||+.+..+...+.||++.|.|.+|+|.+.
T Consensus       109 h~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~  166 (487)
T KOG0310|consen  109 HQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPAND  166 (487)
T ss_pred             ccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCC
Confidence            3557999999998888999999999999999999998779999999999999999754

>KOG1539|consensus

Probab=97.34  E-value=0.00044  Score=73.70  Aligned_cols=56  Identities=14%  Similarity=0.134  Sum_probs=50.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|++++||| |+.+|++++.|++|++||+-+++++-.|-- ..+++++.|+|.+++
T Consensus       576 ~nritd~~FS~-DgrWlisasmD~tIr~wDlpt~~lID~~~v-d~~~~sls~SPngD~  631 (910)
T KOG1539|consen  576 GNRITDMTFSP-DGRWLISASMDSTIRTWDLPTGTLIDGLLV-DSPCTSLSFSPNGDF  631 (910)
T ss_pred             ccceeeeEeCC-CCcEEEEeecCCcEEEEeccCcceeeeEec-CCcceeeEECCCCCE
Confidence            46799999999 899999999999999999999999887754 378999999998763

>KOG0639|consensus

Probab=97.33  E-value=0.00024  Score=72.89  Aligned_cols=73  Identities=15%  Similarity=0.269  Sum_probs=57.9

Q ss_pred             hhccccccccccCCcC---CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        219 NLRAFRNVSSQAGLHS---ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       219 ~Iksyk~tsS~p~lHS---as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ++..|++.+..+.+..   +.-+...+|+++| |.++++++-.||+|.|||+.+..+++.|+||++-+.|+..++++
T Consensus       488 tlsiWDLAapTprikaeltssapaCyALa~sp-DakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dG  563 (705)
T KOG0639|consen  488 TLSIWDLAAPTPRIKAELTSSAPACYALAISP-DAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDG  563 (705)
T ss_pred             eeeeeeccCCCcchhhhcCCcchhhhhhhcCC-ccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCC
Confidence            5566776664433221   1124567799999 78998888899999999999999999999999999999998875

>KOG0278|consensus

Probab=97.31  E-value=0.00043  Score=66.28  Aligned_cols=55  Identities=20%  Similarity=0.321  Sum_probs=49.8

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe-ccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL-KGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL-kGHTkkVtSVaFhPd~~  293 (294)
                      -.|.+.+++| +..++++||.|..++.||+.|+..+..+ +||-.+|.||.|+|++.
T Consensus       225 ~nV~SASL~P-~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE  280 (334)
T KOG0278|consen  225 CNVESASLHP-KKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGE  280 (334)
T ss_pred             cccccccccC-CCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCc
Confidence            3688999999 4689999999999999999999988886 99999999999999863

>KOG0646|consensus

Probab=97.30  E-value=0.00017  Score=72.60  Aligned_cols=52  Identities=23%  Similarity=0.417  Sum_probs=46.9

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ..|+||+++- |+++|++|+.||+|+|||+.+.|+++++.--.++|+.+.+.|
T Consensus       278 ~~ITcLais~-DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~  329 (476)
T KOG0646|consen  278 SAITCLAIST-DGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINP  329 (476)
T ss_pred             cceeEEEEec-CccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeec
Confidence            4799999996 899999999999999999999999999886667899988854

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=97.29  E-value=0.0013  Score=55.19  Aligned_cols=56  Identities=16%  Similarity=0.344  Sum_probs=49.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecC-CCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGN-DCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~-DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++.++++++. |+++++||..++..+.++.+|...|.+++|+|++.
T Consensus       155 ~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  211 (466)
T COG2319         155 SESVTSLAFSP-DGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGG  211 (466)
T ss_pred             cccEEEEEECC-CCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcc
Confidence            45688999998 5778888885 99999999999999999999999999999998764

>KOG1332|consensus

Probab=97.28  E-value=0.00013  Score=69.31  Aligned_cols=59  Identities=22%  Similarity=0.393  Sum_probs=49.2

Q ss_pred             CCCCCCEEEEEeccCC--C-----------CEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCCC
Q psy12461        234 SASVPGILAMDIQVED--T-----------SKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       234 Sas~pGIlSLdfSpsD--g-----------nlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd~  292 (294)
                      .++..||++++|.|..  +           ..|+|||.|.+|+||+..+++  ..++|++|++.|.+|+|.|..
T Consensus       146 ~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~  219 (299)
T KOG1332|consen  146 FAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSV  219 (299)
T ss_pred             hccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhcccc
Confidence            3457899999999841  2           459999999999999998863  566799999999999999964

>KOG0647|consensus

Probab=97.23  E-value=0.00078  Score=65.45  Aligned_cols=71  Identities=23%  Similarity=0.313  Sum_probs=55.2

Q ss_pred             hhcccccccc---ccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        219 NLRAFRNVSS---QAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       219 ~Iksyk~tsS---~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      +|+.|....+   .+.....+...|++++|+. |++.+++|+.|+.+++||+.++| +..+..|..+|.++.|-+.
T Consensus        51 tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd~pvkt~~wv~~  124 (347)
T KOG0647|consen   51 TVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKLWDLASGQ-VSQVAAHDAPVKTCHWVPG  124 (347)
T ss_pred             ceEEEEEecCCcccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEEEEccCCC-eeeeeecccceeEEEEecC
Confidence            6777776553   1111112356799999997 89999999999999999999997 5667889999999999653

>KOG0268|consensus

Probab=97.23  E-value=0.00015  Score=71.73  Aligned_cols=57  Identities=14%  Similarity=0.277  Sum_probs=51.0

Q ss_pred             CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        234 SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       234 Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      +.+..||.||+=+|..-+.+|||+.||.|+|||+.+..+..+|+.|.+.|..+.++.
T Consensus        63 ~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~  119 (433)
T KOG0268|consen   63 DGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ  119 (433)
T ss_pred             cccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc
Confidence            344889999999995447899999999999999999999999999999999998764

>KOG1310|consensus

Probab=97.23  E-value=0.0005  Score=71.14  Aligned_cols=67  Identities=16%  Similarity=0.276  Sum_probs=54.6

Q ss_pred             hccccccccccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe-ccCCCcEEEEEECCC
Q psy12461        220 LRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL-KGHRKKVTRVVYHPS  291 (294)
Q Consensus       220 Iksyk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL-kGHTkkVtSVaFhPd  291 (294)
                      |....+.+.. ..|   ..-|+||+|+. +|.+|+||+.|..+.|||+-.-|+++.+ .||+.-|.++.|-|.
T Consensus        37 lrrL~lE~eL-~GH---~GCVN~LeWn~-dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~  104 (758)
T KOG1310|consen   37 LRRLDLEAEL-TGH---TGCVNCLEWNA-DGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPY  104 (758)
T ss_pred             Hhhcchhhhh-ccc---cceecceeecC-CCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeecc
Confidence            3344444433 245   45699999997 8999999999999999999988888876 599999999999885

>KOG0308|consensus

Probab=97.21  E-value=0.00075  Score=70.56  Aligned_cols=72  Identities=14%  Similarity=0.244  Sum_probs=58.1

Q ss_pred             hhccccccccccCC-cCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        219 NLRAFRNVSSQAGL-HSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       219 ~Iksyk~tsS~p~l-HSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      +|.-|.+.+...-+ -.+|...|.+|-+++ ||+.++|+|.|++|+|||+...+|++|+..|++.|+++.-+|+
T Consensus       194 ~lr~wDprt~~kimkLrGHTdNVr~ll~~d-DGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~s  266 (735)
T KOG0308|consen  194 DLRLWDPRTCKKIMKLRGHTDNVRVLLVND-DGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPS  266 (735)
T ss_pred             ceEEeccccccceeeeeccccceEEEEEcC-CCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCC
Confidence            55556665532111 113467899999997 8999999999999999999999999999999999999987765

>KOG0308|consensus

Probab=97.20  E-value=0.00088  Score=70.05  Aligned_cols=60  Identities=17%  Similarity=0.334  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        234 SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       234 Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +++..+|.+||.++ .+.+|++||..+.+++||.++++.+..|.||+.-|.++..+.|+.|
T Consensus       168 sG~k~siYSLA~N~-t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~  227 (735)
T KOG0308|consen  168 SGPKDSIYSLAMNQ-TGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTR  227 (735)
T ss_pred             CCCccceeeeecCC-cceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCe
Confidence            35577899999998 4889999999999999999999999999999999999999998854

>KOG0640|consensus

Probab=97.14  E-value=0.00028  Score=69.09  Aligned_cols=57  Identities=18%  Similarity=0.317  Sum_probs=46.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc--CCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG--HRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG--HTkkVtSVaFhPd~~Q  294 (294)
                      ...|++|+|+| ...+|++|+.|++|++||+..-..-+.||.  .+.+|.++.|||.+.+
T Consensus       172 ~devn~l~FHP-re~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGef  230 (430)
T KOG0640|consen  172 VDEVNDLDFHP-RETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEF  230 (430)
T ss_pred             cCcccceeecc-hhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCce
Confidence            57899999999 478999999999999999986543333332  4579999999998753

>KOG0264|consensus

Probab=97.13  E-value=0.00053  Score=68.50  Aligned_cols=57  Identities=14%  Similarity=0.171  Sum_probs=51.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCC--CcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKD--TEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle--TgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|..++|++.+.++|++.+.|+.+.|||.+  +.++.++.++|+++|+||+|+|.+.
T Consensus       227 ~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~  285 (422)
T KOG0264|consen  227 EDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNE  285 (422)
T ss_pred             CcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCC
Confidence            45699999999888999999999999999999  6788889999999999999999753

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=97.13  E-value=0.0014  Score=56.32  Aligned_cols=51  Identities=20%  Similarity=0.242  Sum_probs=43.5

Q ss_pred             CCEEEEEeccCCCCEEEEe-cCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        238 PGILAMDIQVEDTSKILTG-GNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATG-G~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ..+.+++|+| ++.+|+++ +.+++|+|||+++++++.+++.+ +..++++|+|
T Consensus       249 ~~~~~~~~~~-~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~  300 (300)
T TIGR03866       249 QRVWQLAFTP-DEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP  300 (300)
T ss_pred             CCcceEEECC-CCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence            3588999999 68887765 67999999999999999999876 6669999986

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0303|consensus

Probab=97.13  E-value=0.00048  Score=68.81  Aligned_cols=57  Identities=14%  Similarity=0.228  Sum_probs=52.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|-.++|||+-.+.|+|+|.|.+|.|||+.|++.+-+|+ |..-|.++.|+-++++
T Consensus       131 ~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~  187 (472)
T KOG0303|consen  131 QRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSL  187 (472)
T ss_pred             ceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCce
Confidence            56799999999878999999999999999999999999999 9999999999998864

>KOG0274|consensus

Probab=97.12  E-value=0.0013  Score=67.29  Aligned_cols=54  Identities=20%  Similarity=0.396  Sum_probs=48.7

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      +..+|-+++|.. .++++++|+.|++++|||+.+++|+++|.||+..|.++...+
T Consensus       248 H~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~  301 (537)
T KOG0274|consen  248 HFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP  301 (537)
T ss_pred             CCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC
Confidence            367899999985 578999999999999999999999999999999999987654

>KOG1446|consensus

Probab=97.11  E-value=0.0009  Score=64.63  Aligned_cols=50  Identities=30%  Similarity=0.517  Sum_probs=46.4

Q ss_pred             EEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc-CCCcEEEEEECCC
Q psy12461        241 LAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG-HRKKVTRVVYHPS  291 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG-HTkkVtSVaFhPd  291 (294)
                      .+..|.| |+++|++|+.||+|.+|+++++..+..++| |..++.++.|+|.
T Consensus       236 ~~a~ftP-ds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~  286 (311)
T KOG1446|consen  236 LSATFTP-DSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPR  286 (311)
T ss_pred             eeEEECC-CCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCc
Confidence            4667889 899999999999999999999999999999 8999999999995

>KOG0268|consensus

Probab=97.09  E-value=0.00092  Score=66.29  Aligned_cols=62  Identities=10%  Similarity=0.175  Sum_probs=45.5

Q ss_pred             CCCCCh-hhhccccccccccCCc--CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE
Q psy12461        212 EDLSTA-DNLRAFRNVSSQAGLH--SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA  274 (294)
Q Consensus       212 e~LAS~-E~Iksyk~tsS~p~lH--Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~  274 (294)
                      ..+||. |.|..|+.....| +.  +...+.|.|+.|+|...++|++|+.|+.|.|||++++++++
T Consensus       160 ~~FaTcGe~i~IWD~~R~~P-v~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~  224 (433)
T KOG0268|consen  160 SVFATCGEQIDIWDEQRDNP-VSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLK  224 (433)
T ss_pred             ccccccCceeeecccccCCc-cceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccc
Confidence            345544 5777777655443 11  22356799999999878899999999999999999887654

>KOG0772|consensus

Probab=97.07  E-value=0.00036  Score=71.59  Aligned_cols=74  Identities=16%  Similarity=0.292  Sum_probs=54.4

Q ss_pred             hhcccccccc--ccCC--cCCCCC--CEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccC--CCcEEEEEEC
Q psy12461        219 NLRAFRNVSS--QAGL--HSASVP--GILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGH--RKKVTRVVYH  289 (294)
Q Consensus       219 ~Iksyk~tsS--~p~l--HSas~p--GIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGH--TkkVtSVaFh  289 (294)
                      .|..|+..+-  .+.+  -.+|.+  .|+||.||+ |+++|+|-|.|.+++|||+++ .+++.++.|=  -.+-+.++|+
T Consensus       340 SIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~-dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FS  418 (641)
T KOG0772|consen  340 SIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSY-DGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFS  418 (641)
T ss_pred             ceeeeecCCcccccceEeeeccCCCCceeEEEecc-ccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccC
Confidence            5666764321  1222  234455  899999998 899999999999999999987 4677766653  3567899999


Q ss_pred             CCCC
Q psy12461        290 PSEL  293 (294)
Q Consensus       290 Pd~~  293 (294)
                      |+.+
T Consensus       419 Pd~k  422 (641)
T KOG0772|consen  419 PDDK  422 (641)
T ss_pred             CCce
Confidence            9864

>KOG2394|consensus

Probab=97.06  E-value=0.00042  Score=71.27  Aligned_cols=56  Identities=18%  Similarity=0.224  Sum_probs=51.5

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..|+..+|+| |+.+||+-+.||.++|||..+.+++..++.-=+-..||+|+||+++
T Consensus       291 g~in~f~FS~-DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKy  346 (636)
T KOG2394|consen  291 GSINEFAFSP-DGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKY  346 (636)
T ss_pred             ccccceeEcC-CCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccE
Confidence            4789999999 8999999999999999999999999888876678999999999975

>smart00320 WD40 WD40 repeats

Probab=97.04  E-value=0.0014  Score=37.68  Aligned_cols=29  Identities=7%  Similarity=0.207  Sum_probs=25.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEe
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFN  266 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWD  266 (294)
                      ...|.+++|++ +.+++++|+.|+.+++||
T Consensus        12 ~~~i~~~~~~~-~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320       12 TGPVTSVAFSP-DGKYLASASDDGTIKLWD   40 (40)
T ss_pred             CCceeEEEECC-CCCEEEEecCCCeEEEcC
Confidence            45799999998 468999999999999997

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG0771|consensus

Probab=97.03  E-value=0.00052  Score=68.12  Aligned_cols=52  Identities=21%  Similarity=0.270  Sum_probs=48.4

Q ss_pred             EEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        241 LAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+++|+. ++..++|||.||+++||++.+...+..+..|.+.|.++.|+||++
T Consensus       148 k~vaf~~-~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk  199 (398)
T KOG0771|consen  148 KVVAFNG-DGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGK  199 (398)
T ss_pred             eEEEEcC-CCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCc
Confidence            7889997 689999999999999999988888888999999999999999985

>KOG2110|consensus

Probab=97.01  E-value=0.0021  Score=63.51  Aligned_cols=58  Identities=14%  Similarity=0.169  Sum_probs=50.3

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCc-EEEEeCCCcceEEEeccCCC--cEEEEEECCCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQ-ATVFNKDTEQVVAILKGHRK--KVTRVVYHPSEL  293 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGT-VkVWDleTgKvV~TLkGHTk--kVtSVaFhPd~~  293 (294)
                      +|...+-||+|++ +|.+|||++..|| |+||++.+|+.+..|.-.+.  .|.+++|+|+.+
T Consensus       171 aH~~~lAalafs~-~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~  231 (391)
T KOG2110|consen  171 AHKGPLAALAFSP-DGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQ  231 (391)
T ss_pred             ecCCceeEEEECC-CCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCC
Confidence            4567899999998 7999999999887 58999999999999986664  567899999875

>KOG0307|consensus

Probab=96.98  E-value=0.00085  Score=73.01  Aligned_cols=57  Identities=23%  Similarity=0.358  Sum_probs=53.5

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      |..||++++|++.|..+++|+|.|+.|.+|+.+|++++..|..-..+++.|.|.|.+
T Consensus       252 H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~  308 (1049)
T KOG0307|consen  252 HQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRN  308 (1049)
T ss_pred             cccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCC
Confidence            478999999999888999999999999999999999999999988999999999853

>KOG2111|consensus

Probab=96.97  E-value=0.0026  Score=62.07  Aligned_cols=58  Identities=10%  Similarity=0.251  Sum_probs=49.8

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCc-EEEEeCCCcceEEEeccCC--CcEEEEEECCCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQ-ATVFNKDTEQVVAILKGHR--KKVTRVVYHPSEL  293 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGT-VkVWDleTgKvV~TLkGHT--kkVtSVaFhPd~~  293 (294)
                      +|...|.|++++. +|.+|||+|..|| |+|||.++|..+..|.-.+  ..|.+++|+|+.+
T Consensus       179 AH~s~Iacv~Ln~-~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s  239 (346)
T KOG2111|consen  179 AHDSDIACVALNL-QGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSS  239 (346)
T ss_pred             cccCceeEEEEcC-CccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCcc
Confidence            3466899999997 7999999999876 7999999999999987433  6799999999864

>KOG1274|consensus

Probab=96.95  E-value=0.0013  Score=70.62  Aligned_cols=57  Identities=14%  Similarity=0.247  Sum_probs=48.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccC--------CCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH--------RKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGH--------TkkVtSVaFhPd~~Q  294 (294)
                      ...|++|+|+| ++++||+.+.||+|+|||++++.+..+|.+=        +..++.++|||++.+
T Consensus       138 ~apVl~l~~~p-~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~  202 (933)
T KOG1274|consen  138 DAPVLQLSYDP-KGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGT  202 (933)
T ss_pred             CCceeeeeEcC-CCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCe
Confidence            45699999999 6999999999999999999999988887652        456788999999754

>KOG0641|consensus

Probab=96.93  E-value=0.0021  Score=61.12  Aligned_cols=53  Identities=11%  Similarity=0.308  Sum_probs=50.3

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ..|.++++.|+ +.+++||-.|..+.+||++-++.++.|--|+..|.+|.|+|.
T Consensus       232 savaav~vdps-grll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~  284 (350)
T KOG0641|consen  232 SAVAAVAVDPS-GRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPG  284 (350)
T ss_pred             ceeEEEEECCC-cceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCC
Confidence            46999999994 999999999999999999999999999999999999999995

>KOG1408|consensus

Probab=96.87  E-value=0.0013  Score=69.89  Aligned_cols=58  Identities=21%  Similarity=0.245  Sum_probs=52.1

Q ss_pred             CCCCEEEEEeccCCCCEEEEec--CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGG--NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG--~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +...++||+|++ +|.|+|||-  .--.++||++..-.+++.|..|.-.|+||+|+|.+++
T Consensus        77 sRk~~t~vAfS~-~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~~ky  136 (1080)
T KOG1408|consen   77 SRKPLTCVAFSQ-NGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPGNKY  136 (1080)
T ss_pred             cCcceeEEEEcC-CCcEEEecccCCCccceeeeeccccchhhhhhccccceeeeecCCCcE
Confidence            345799999998 799999975  6778999999998899999999999999999998764

>KOG1524|consensus

Probab=96.86  E-value=0.0012  Score=68.24  Aligned_cols=54  Identities=15%  Similarity=0.301  Sum_probs=47.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ..=|+|++|++ ..++|+|||.|-.-+|||- -|+.+.+-..|.-+|++|+|+|+.
T Consensus       186 DGiiL~~~W~~-~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~npd~  239 (737)
T KOG1524|consen  186 DGLVLSLSWST-QSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAFNPEK  239 (737)
T ss_pred             CcEEEEeecCc-cccceeecCCceeEEeecc-cCcccccCChhccceeeeeecccc
Confidence            34489999998 5899999999999999997 467788888899999999999984

>KOG0771|consensus

Probab=96.77  E-value=0.0031  Score=62.74  Aligned_cols=55  Identities=18%  Similarity=0.285  Sum_probs=50.8

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-cCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-GHTkkVtSVaFhPd~~  293 (294)
                      .+|+|++++. +++++|-|+.||.|-||+..+.++++.++ .|...||.|.|+|+.+
T Consensus       282 ~siSsl~VS~-dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr  337 (398)
T KOG0771|consen  282 KSISSLAVSD-DGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSR  337 (398)
T ss_pred             CcceeEEEcC-CCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcC
Confidence            4799999998 79999999999999999999999888775 7999999999999875

>KOG0649|consensus

Probab=96.75  E-value=0.0038  Score=59.75  Aligned_cols=54  Identities=26%  Similarity=0.292  Sum_probs=46.4

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ..|.|+++-+.|. .+-|+++|.|+.++-||+++|++-++|+||++-|.+|.-..
T Consensus       113 evPeINam~ldP~-enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~  166 (325)
T KOG0649|consen  113 EVPEINAMWLDPS-ENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRN  166 (325)
T ss_pred             cCCccceeEeccC-CCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecc
Confidence            4689999999996 44455666799999999999999999999999999998743

>KOG0642|consensus

Probab=96.73  E-value=0.0031  Score=65.00  Aligned_cols=58  Identities=16%  Similarity=0.207  Sum_probs=47.3

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCC------C----cceEEEeccCCCcEEEEEECCCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKD------T----EQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle------T----gKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +...|+|+++.+ ++..+.|||.||+|+.|++-      .    .-+..+|.||+..|+.++||+...|
T Consensus       343 H~gPVl~v~v~~-n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~  410 (577)
T KOG0642|consen  343 HEGPVLCVVVPS-NGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDR  410 (577)
T ss_pred             ccCceEEEEecC-CceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccc
Confidence            456799999998 58999999999999999432      1    1255689999999999999986543

>KOG1036|consensus

Probab=96.71  E-value=0.0017  Score=62.84  Aligned_cols=54  Identities=11%  Similarity=0.170  Sum_probs=48.5

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .|++|+|+|. ...|||||.||.|.+||+.+.|-+..|..-...|.+++|+-++.
T Consensus       234 PVNai~Fhp~-~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~  287 (323)
T KOG1036|consen  234 PVNAIAFHPI-HGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGS  287 (323)
T ss_pred             EeceeEeccc-cceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCC
Confidence            5999999995 66799999999999999999998888888777899999998875

>KOG0290|consensus

Probab=96.71  E-value=0.0025  Score=62.04  Aligned_cols=56  Identities=21%  Similarity=0.249  Sum_probs=49.6

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc---eEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ---VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK---vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+++.+|+..+.++|.|.+.|.|+.|||++++.   +-..|-.|.+.|.+|+|...+.
T Consensus       151 aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~  209 (364)
T KOG0290|consen  151 APLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSR  209 (364)
T ss_pred             CcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCcc
Confidence            4699999998889999999999999999999874   4567889999999999988554

>KOG1009|consensus

Probab=96.69  E-value=0.0014  Score=65.38  Aligned_cols=56  Identities=21%  Similarity=0.367  Sum_probs=52.4

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|..|+|+| +++++++|+.|.++++||+..|++++.+.+|..-|+-|+|.|-++
T Consensus       123 ~~diydL~Ws~-d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~q  178 (434)
T KOG1009|consen  123 RDDIYDLAWSP-DSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQ  178 (434)
T ss_pred             ccchhhhhccC-CCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhh
Confidence            45799999998 799999999999999999999999999999999999999999764

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=96.65  E-value=0.0057  Score=53.79  Aligned_cols=52  Identities=8%  Similarity=0.170  Sum_probs=41.8

Q ss_pred             CEEEEEeccCCCCEE--EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKI--LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlL--ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .|.+++|+| +++.|  ++|..++.|.|||++ ++.+.+|.  +..++.|.|+|++++
T Consensus        61 ~I~~~~WsP-~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~  114 (194)
T PF08662_consen   61 PIHDVAWSP-NGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRF  114 (194)
T ss_pred             ceEEEEECc-CCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCE
Confidence            499999999 56664  346678899999996 77777775  468899999999863

>KOG1332|consensus

Probab=96.65  E-value=0.0023  Score=61.05  Aligned_cols=40  Identities=23%  Similarity=0.396  Sum_probs=36.5

Q ss_pred             CCEEEEecCCCcEEEEeCCCc---ceEEEeccCCCcEEEEEEC
Q psy12461        250 TSKILTGGNDCQATVFNKDTE---QVVAILKGHRKKVTRVVYH  289 (294)
Q Consensus       250 gnlLATGG~DGTVkVWDleTg---KvV~TLkGHTkkVtSVaFh  289 (294)
                      +..|||++.|++|+||..+++   +++.+|.||++||+.|+|.
T Consensus        23 gkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wa   65 (299)
T KOG1332|consen   23 GKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWA   65 (299)
T ss_pred             cceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeec
Confidence            689999999999999999863   5899999999999999993

>KOG0305|consensus

Probab=96.52  E-value=0.0044  Score=63.10  Aligned_cols=72  Identities=15%  Similarity=0.277  Sum_probs=57.8

Q ss_pred             hhhccccccccc-cCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc-CCCcEEEEEECC
Q psy12461        218 DNLRAFRNVSSQ-AGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG-HRKKVTRVVYHP  290 (294)
Q Consensus       218 E~Iksyk~tsS~-p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG-HTkkVtSVaFhP  290 (294)
                      ..+..|...... ..+++.....|++|.|++ ++++||.|-.+|+|.|||..+.+.+.++.+ |...|-+++|..
T Consensus       197 ~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~-~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~  270 (484)
T KOG0305|consen  197 QSVYLWSASSGSVTELCSFGEELVTSVKWSP-DGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNS  270 (484)
T ss_pred             ceEEEEecCCCceEEeEecCCCceEEEEECC-CCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccC
Confidence            345555544432 123333356899999998 799999999999999999999999999999 999999999985

>KOG1407|consensus

Probab=96.51  E-value=0.0053  Score=59.03  Aligned_cols=56  Identities=7%  Similarity=0.119  Sum_probs=46.5

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..|--+.|+|..++++++++.|++|++||++.++++.....- +.=.-+.|+|++.|
T Consensus        65 ~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~-~eni~i~wsp~g~~  120 (313)
T KOG1407|consen   65 DSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETK-GENINITWSPDGEY  120 (313)
T ss_pred             cchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeecc-CcceEEEEcCCCCE
Confidence            457888999988999999999999999999999999877643 33456789998764

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=96.48  E-value=0.0094  Score=51.20  Aligned_cols=53  Identities=13%  Similarity=0.175  Sum_probs=43.0

Q ss_pred             CEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+.+++|+| ++.++ ++++.|+.|++||..+++.+..+..+.. +..+.|+|+++
T Consensus        32 ~~~~l~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~   85 (300)
T TIGR03866        32 RPRGITLSK-DGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGK   85 (300)
T ss_pred             CCCceEECC-CCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCC
Confidence            356799998 57755 7888999999999999999888876644 57789999875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0306|consensus

Probab=96.46  E-value=0.0042  Score=66.12  Aligned_cols=58  Identities=16%  Similarity=0.247  Sum_probs=53.6

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      |...|++|.|-| +..++.|+|.|+.|+-||-+.-+.+++|.||...|+|++-.|+|++
T Consensus       591 HdDSvm~V~F~P-~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~  648 (888)
T KOG0306|consen  591 HDDSVMSVQFLP-KTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSF  648 (888)
T ss_pred             ccCceeEEEEcc-cceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCe
Confidence            567899999999 6788999999999999999999999999999999999999999753

>KOG4328|consensus

Probab=96.45  E-value=0.0068  Score=61.47  Aligned_cols=56  Identities=16%  Similarity=0.282  Sum_probs=48.0

Q ss_pred             CCCEEEEEeccCCC-CEEEEecCCCcEEEEeCCCc----ceEEEeccCCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVEDT-SKILTGGNDCQATVFNKDTE----QVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDg-nlLATGG~DGTVkVWDleTg----KvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ...|.|++|+|+.. ++||+|..-|+|-+||+.++    .-+..|..|+.+|+++.|+|.+
T Consensus       186 ~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n  246 (498)
T KOG4328|consen  186 DRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPAN  246 (498)
T ss_pred             ccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCC
Confidence            46799999999766 79999999999999999643    2467789999999999999964

>KOG1009|consensus

Probab=96.45  E-value=0.0058  Score=61.15  Aligned_cols=56  Identities=20%  Similarity=0.368  Sum_probs=47.2

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc---------ceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTE---------QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg---------KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..|.+++|+++..+.+||||.|..|+||-+..+         +.+..|..|+..|+.|.|+|++.
T Consensus        14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~ge   78 (434)
T KOG1009|consen   14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGE   78 (434)
T ss_pred             CceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcC
Confidence            479999999876669999999999999977542         14668999999999999999863

>KOG0772|consensus

Probab=96.44  E-value=0.0037  Score=64.37  Aligned_cols=55  Identities=15%  Similarity=0.210  Sum_probs=45.7

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc---eEEEeccCCC--cEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ---VVAILKGHRK--KVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK---vV~TLkGHTk--kVtSVaFhPd~~Q  294 (294)
                      .+++++|++ |+++||+|-.||.|++||+....   ....=+.|..  .|+||.|++++++
T Consensus       319 ~~tsC~~nr-dg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~  378 (641)
T KOG0772|consen  319 PVTSCAWNR-DGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNY  378 (641)
T ss_pred             CceeeecCC-CcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccch
Confidence            488999999 89999999999999999985432   2333467988  9999999999875

>KOG0278|consensus

Probab=96.43  E-value=0.0075  Score=58.01  Aligned_cols=55  Identities=20%  Similarity=0.157  Sum_probs=47.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+|..+-|... .+.|+|...|++|++||.++++.+++|.-. .+|+++..+++++
T Consensus       143 tg~Ir~v~wc~e-D~~iLSSadd~tVRLWD~rTgt~v~sL~~~-s~VtSlEvs~dG~  197 (334)
T KOG0278|consen  143 TGGIRTVLWCHE-DKCILSSADDKTVRLWDHRTGTEVQSLEFN-SPVTSLEVSQDGR  197 (334)
T ss_pred             CCcceeEEEecc-CceEEeeccCCceEEEEeccCcEEEEEecC-CCCcceeeccCCC
Confidence            568999999874 567888899999999999999999998753 6899999999876

>KOG1538|consensus

Probab=96.40  E-value=0.006  Score=64.72  Aligned_cols=53  Identities=19%  Similarity=0.335  Sum_probs=46.3

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .|..++|-| ||+.++.+ +|..+.|||...|..+.+|+||.+-|.+|+|+.+++
T Consensus        14 ci~d~afkP-DGsqL~lA-Ag~rlliyD~ndG~llqtLKgHKDtVycVAys~dGk   66 (1081)
T KOG1538|consen   14 CINDIAFKP-DGTQLILA-AGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGK   66 (1081)
T ss_pred             chheeEECC-CCceEEEe-cCCEEEEEeCCCcccccccccccceEEEEEEccCCc
Confidence            588999999 67766655 356789999999999999999999999999999875

>KOG4283|consensus

Probab=96.38  E-value=0.0073  Score=59.12  Aligned_cols=42  Identities=29%  Similarity=0.388  Sum_probs=30.6

Q ss_pred             EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        252 KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       252 lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +||+|-.|-.|++-|+.+|.+-++|.||+..|.+|.|+|...
T Consensus       160 LiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e  201 (397)
T KOG4283|consen  160 LIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSE  201 (397)
T ss_pred             EEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCce
Confidence            455555555555556666666788899999999999999653

>KOG1188|consensus

Probab=96.31  E-value=0.0042  Score=61.14  Aligned_cols=58  Identities=10%  Similarity=0.313  Sum_probs=45.7

Q ss_pred             CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc----ceEEEeccCCCcEEEEEECCCC
Q psy12461        234 SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE----QVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       234 Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg----KvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      .+|..-|++|.|+|+++++|+||+.||.|.|||+...    .++.++ .|...|-++.|+..+
T Consensus       162 eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~vi-N~~sSI~~igw~~~~  223 (376)
T KOG1188|consen  162 ESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVI-NHGSSIHLIGWLSKK  223 (376)
T ss_pred             hhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhh-cccceeeeeeeecCC
Confidence            4456789999999999999999999999999999642    233343 366778888887654

>KOG4714|consensus

Probab=96.29  E-value=0.0019  Score=62.00  Aligned_cols=55  Identities=18%  Similarity=0.350  Sum_probs=49.1

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc-eEEEeccCCCcEEEEEECCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ-VVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK-vV~TLkGHTkkVtSVaFhPd~  292 (294)
                      .+|.+++-+|...+++++|+.||.+-|||.++.. ++..|+.|.++|+.|-|||.+
T Consensus       180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~  235 (319)
T KOG4714|consen  180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKN  235 (319)
T ss_pred             ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCC
Confidence            3599999999878899999999999999999874 566899999999999999964

>KOG0643|consensus

Probab=96.28  E-value=0.013  Score=56.60  Aligned_cols=55  Identities=11%  Similarity=0.094  Sum_probs=50.0

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      +...|+-|.++. ++++|.|++.|.++.||=..+|+.+.+++||+..|+|+.-.-+
T Consensus         9 HERplTqiKyN~-eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~   63 (327)
T KOG0643|consen    9 HERPLTQIKYNR-EGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWD   63 (327)
T ss_pred             CccccceEEecC-CCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCC
Confidence            367899999997 7999999999999999999999999999999999999876544

>KOG2445|consensus

Probab=96.28  E-value=0.013  Score=57.34  Aligned_cols=53  Identities=13%  Similarity=0.210  Sum_probs=45.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC--c--ceEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT--E--QVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT--g--KvV~TLkGHTkkVtSVaFhP  290 (294)
                      ..=|.|+.|++ -|..+|||+.|++++|||.+.  +  .+....+.|...|..|.|.+
T Consensus        13 ~DlihdVs~D~-~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAh   69 (361)
T KOG2445|consen   13 KDLIHDVSFDF-YGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAH   69 (361)
T ss_pred             cceeeeeeecc-cCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecC
Confidence            45599999998 589999999999999999643  3  37778999999999999943

>KOG1408|consensus

Probab=96.25  E-value=0.0062  Score=64.95  Aligned_cols=56  Identities=16%  Similarity=0.140  Sum_probs=51.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ......|.+.|+ +.||||.-.|+++.+||..++++++++.||+..|+.+.|.+|-+
T Consensus       641 eG~lIKv~lDPS-giY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCk  696 (1080)
T KOG1408|consen  641 EGDLIKVILDPS-GIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCK  696 (1080)
T ss_pred             CCceEEEEECCC-ccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccch
Confidence            345778899994 99999999999999999999999999999999999999999865

>KOG0290|consensus

Probab=96.20  E-value=0.01  Score=57.91  Aligned_cols=58  Identities=16%  Similarity=0.250  Sum_probs=47.0

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--------------------------------------------
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--------------------------------------------  271 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--------------------------------------------  271 (294)
                      +...|-.++|.....++|||.|.||.|++||++.-.                                            
T Consensus       195 HDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR  274 (364)
T KOG0290|consen  195 HDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIR  274 (364)
T ss_pred             cCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEec
Confidence            356899999997445789999999999999987521                                            


Q ss_pred             ----eEEEeccCCCcEEEEEECCCCC
Q psy12461        272 ----VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       272 ----vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                          .+..|.+|.+.|+.++|.|..+
T Consensus       275 ~P~tpva~L~~H~a~VNgIaWaPhS~  300 (364)
T KOG0290|consen  275 VPCTPVARLRNHQASVNGIAWAPHSS  300 (364)
T ss_pred             CCCcceehhhcCcccccceEecCCCC
Confidence                2567899999999999999643

>KOG1063|consensus

Probab=96.19  E-value=0.0062  Score=64.26  Aligned_cols=69  Identities=17%  Similarity=0.257  Sum_probs=53.5

Q ss_pred             ccccccccccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-ce---EEEeccCCCcEEEEEECCCCCC
Q psy12461        221 RAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-QV---VAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       221 ksyk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-Kv---V~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .+|.+..... .|+.   .|+-|+||| |+.||++.+-|.++.||..... ..   ...++.|+.-|+++.|+|++.|
T Consensus       560 ~~W~~~~~L~-~HsL---TVT~l~FSp-dg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~  632 (764)
T KOG1063|consen  560 ANWLQVQELE-GHSL---TVTRLAFSP-DGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKY  632 (764)
T ss_pred             cchhhhheec-ccce---EEEEEEECC-CCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccce
Confidence            4444444332 5765   499999999 7999999999999999988543 22   2347899999999999999874

>KOG0641|consensus

Probab=96.18  E-value=0.0091  Score=56.95  Aligned_cols=54  Identities=20%  Similarity=0.186  Sum_probs=43.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEE--eCCCcceE---EEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVF--NKDTEQVV---AILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVW--DleTgKvV---~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|.|.+|+| ++.+||||++|++|++.  +.++.+.+   ..|.-|...|.+++|-.+
T Consensus        89 kgsiyc~~ws~-~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~  147 (350)
T KOG0641|consen   89 KGSIYCTAWSP-CGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDD  147 (350)
T ss_pred             CccEEEEEecC-ccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecC
Confidence            45699999999 79999999999999994  55555433   247789999999999543

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=96.10  E-value=0.031  Score=46.94  Aligned_cols=55  Identities=18%  Similarity=0.350  Sum_probs=45.7

Q ss_pred             CCCCEEEEEeccCCCC-EEEEecCCCcEEEEeCCCcceEE-EeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQVVA-ILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKvV~-TLkGHTkkVtSVaFhPd~  292 (294)
                      +...|.+++|+| ++. ++++++.|++|++||..++.++. .+.+|...+ -..|+|++
T Consensus       197 ~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~  253 (466)
T COG2319         197 HTDPVSSLAFSP-DGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDG  253 (466)
T ss_pred             CCCceEEEEEcC-CcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCC
Confidence            356899999997 566 66666999999999999899888 799998886 44788875

>KOG4547|consensus

Probab=95.94  E-value=0.017  Score=59.61  Aligned_cols=51  Identities=25%  Similarity=0.378  Sum_probs=45.5

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      +.+.++.++| |+.++++|+  ++|++||+++.+++.+|.||..+|.++.|..+
T Consensus       145 ~~~~sl~is~-D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~  195 (541)
T KOG4547|consen  145 PLVSSLCISP-DGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTL  195 (541)
T ss_pred             CccceEEEcC-CCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEe
Confidence            4578899998 788999885  69999999999999999999999999999654

>KOG0300|consensus

Probab=95.94  E-value=0.0062  Score=60.20  Aligned_cols=56  Identities=27%  Similarity=0.394  Sum_probs=50.5

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..-|.+.+|-. .+..++|++.|.++.|||++++.++..|.||....+-+.-||..+
T Consensus       272 ~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQr  327 (481)
T KOG0300|consen  272 RAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQR  327 (481)
T ss_pred             ccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcce
Confidence            45688999986 589999999999999999999999999999999999998888654

>KOG0644|consensus

Probab=95.93  E-value=0.0023  Score=68.83  Aligned_cols=167  Identities=19%  Similarity=0.192  Sum_probs=94.4

Q ss_pred             CCCCCCeeEeeccccccCcccccccCCCCccccccCCCCCccCCCCchhhccccCCCCCC--cc------cCCCCCHHHH
Q psy12461        118 NIGERPALVFSGTQNVVPGRVNGEASNGAGVVGHELHGLRSAHVPHANAIAAEAAGTPNQ--PV------EQIGISEEVQ  189 (294)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~aMe--v~------ee~GLPeeVI  189 (294)
                      +|..-|.|+=+|+|-++----+=+.+--+|.----+|--+++..+-  ..+..++|-+.-  +.      -...-|-.++
T Consensus       100 ~~a~vpTlLgtg~qsLl~r~k~~~~~~~~~s~~~~~h~~~~~~~~~--sl~s~~~~~~~h~~a~~i~~at~~~akPgtmv  177 (1113)
T KOG0644|consen  100 TIARVPTLLGTGRQSLLRRAKDIRHTVWKGSAFRWPHMHADQVRGV--SLRSIGGGFEIHHRAPSIGCATFSIAKPGTMV  177 (1113)
T ss_pred             eeecccchhcchhHHHHhhhhhcccccccccccccccccCcccccc--eeccCCcchhhhhcCcccccceeeecCcHHHH
Confidence            6777899999999977643222222211111111122222222221  112222222211  00      1234577888


Q ss_pred             HHHHHHHHHHhhhh-------ccc-CCCCCCC----CCChhhhccccccccccCCcCCCCCCEEEEEeccCCCCEEEEec
Q psy12461        190 AKLQDKATILTQER-------KKR-SRAAPED----LSTADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGG  257 (294)
Q Consensus       190 ~kL~etak~LSs~R-------KKR-gK~vPe~----LAS~E~Iksyk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG  257 (294)
                      ++|+.....| -.|       +-| |.-+..+    ++..+...+-.+.++.+ .|+   ..|+.++.+. +..++|+++
T Consensus       178 qkmk~ikrLl-gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~r-Ghs---~ditdlavs~-~n~~iaaaS  251 (1113)
T KOG0644|consen  178 QKMKNIKRLL-GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCR-GHS---GDITDLAVSS-NNTMIAAAS  251 (1113)
T ss_pred             HHHHHHHHHH-hhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCC-CCc---cccchhccch-hhhhhhhcc
Confidence            8888776644 222       222 1111111    11111122222333332 454   4699999987 477899999


Q ss_pred             CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        258 NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       258 ~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +|..|+||-+.++.++..|.||++.||+++|+|-.
T Consensus       252 ~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~  286 (1113)
T KOG0644|consen  252 NDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA  286 (1113)
T ss_pred             cCceEEEEecCCCchHHHHhccccceeeeccCccc
Confidence            99999999999999999999999999999999953

>KOG2096|consensus

Probab=95.92  E-value=0.015  Score=57.50  Aligned_cols=54  Identities=17%  Similarity=0.196  Sum_probs=41.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-----ceEE-EeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-----QVVA-ILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-----KvV~-TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++++|+. ||.+|||++.|++|+|||++.-     ++++ +++-  +--+.|.|.||-+
T Consensus        86 ~~~vt~~~FsS-dGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~--dhpT~V~FapDc~  145 (420)
T KOG2096|consen   86 KKEVTDVAFSS-DGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEY--DHPTRVVFAPDCK  145 (420)
T ss_pred             CCceeeeEEcC-CCceeEEEeCCceEEEEecchhhhhhhhHhhccccC--CCceEEEECCCcc
Confidence            56799999996 8999999999999999999752     2222 2331  2467889999853

>KOG0301|consensus

Probab=95.90  E-value=0.016  Score=61.28  Aligned_cols=96  Identities=16%  Similarity=0.219  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHHHHHhhhhcccCCCCCCC-CCChh---hhccccccccccCCcCCCCCCEEEEEeccCCCCEEEEecCCCc
Q psy12461        186 EEVQAKLQDKATILTQERKKRSRAAPED-LSTAD---NLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQ  261 (294)
Q Consensus       186 eeVI~kL~etak~LSs~RKKRgK~vPe~-LAS~E---~Iksyk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGT  261 (294)
                      .+....++.+.+...+..     ..|++ ++|+.   .|+-|+-......+ +.|..-|..|++=+  ..-|+|+++||.
T Consensus       130 ~~l~~~l~gH~asVWAv~-----~l~e~~~vTgsaDKtIklWk~~~~l~tf-~gHtD~VRgL~vl~--~~~flScsNDg~  201 (745)
T KOG0301|consen  130 GELVYSLQGHTASVWAVA-----SLPENTYVTGSADKTIKLWKGGTLLKTF-SGHTDCVRGLAVLD--DSHFLSCSNDGS  201 (745)
T ss_pred             hhhhcccCCcchheeeee-----ecCCCcEEeccCcceeeeccCCchhhhh-ccchhheeeeEEec--CCCeEeecCCce
Confidence            344444666666555442     24555 44443   67777654433222 23466789999876  456899999999


Q ss_pred             EEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        262 ATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       262 VkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      |++||+ ++.++..+.||+.-|.++...+
T Consensus       202 Ir~w~~-~ge~l~~~~ghtn~vYsis~~~  229 (745)
T KOG0301|consen  202 IRLWDL-DGEVLLEMHGHTNFVYSISMAL  229 (745)
T ss_pred             EEEEec-cCceeeeeeccceEEEEEEecC
Confidence            999999 8999999999999999999433

>KOG1445|consensus

Probab=95.89  E-value=0.01  Score=62.81  Aligned_cols=54  Identities=13%  Similarity=0.185  Sum_probs=47.3

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      -|-||.|+|+-..++++| .-|+++|||+.+++.+..+.+|+..|.+..|+.|++
T Consensus       130 ~vE~l~fHpTaDgil~s~-a~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~  183 (1012)
T KOG1445|consen  130 IVECLRFHPTADGILASG-AHGSVYITDISTQKTAVELSGHTDKVQSADWSEDGK  183 (1012)
T ss_pred             EEEEeecccCcCceEEec-cCceEEEEEcccCceeecccCCchhhhccccccCCc
Confidence            477999999755566665 689999999999999999999999999999999875

>KOG0646|consensus

Probab=95.85  E-value=0.0088  Score=60.58  Aligned_cols=55  Identities=11%  Similarity=0.127  Sum_probs=50.5

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..|.||+-+| +|.|++.|+.-+++++|.+.+|.++..+.+|=..|+++.|+.|++
T Consensus        82 g~v~al~s~n-~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs  136 (476)
T KOG0646|consen   82 GPVHALASSN-LGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGS  136 (476)
T ss_pred             cceeeeecCC-CceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCc
Confidence            4588999998 688888888999999999999999999999999999999999875

>KOG0974|consensus

Probab=95.78  E-value=0.018  Score=62.60  Aligned_cols=54  Identities=19%  Similarity=0.282  Sum_probs=49.4

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-EeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-ILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-TLkGHTkkVtSVaFhPd  291 (294)
                      ...|-++.++- |+.+++|.+.|.++++|++++.+.+. +.=||+.+|+++.|+|.
T Consensus       175 eG~iF~i~~s~-dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n  229 (967)
T KOG0974|consen  175 EGSIFSIVTSL-DGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN  229 (967)
T ss_pred             CCceEEEEEcc-CCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc
Confidence            55699999986 79999999999999999999988777 88899999999999986

>KOG0321|consensus

Probab=95.78  E-value=0.01  Score=62.28  Aligned_cols=56  Identities=16%  Similarity=0.251  Sum_probs=51.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEE--eccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAI--LKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~T--LkGHTkkVtSVaFhPd~~  293 (294)
                      .+.|..|.|-| ...+|++++.|.+|++||+.+.+++..  +.||+..|.+++|+|.+.
T Consensus       100 ~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~  157 (720)
T KOG0321|consen  100 KNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNP  157 (720)
T ss_pred             cceeEeeccCC-CceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCC
Confidence            67899999998 577899999999999999999999988  999999999999999753

>KOG1240|consensus

Probab=95.73  E-value=0.046  Score=61.05  Aligned_cols=106  Identities=21%  Similarity=0.219  Sum_probs=59.9

Q ss_pred             CHHHHHHHHHHHHHHhhhhcccCCCCCCCCCChh-------------hhccccccccc-cCCcCCCCCCEEEEEeccCCC
Q psy12461        185 SEEVQAKLQDKATILTQERKKRSRAAPEDLSTAD-------------NLRAFRNVSSQ-AGLHSASVPGILAMDIQVEDT  250 (294)
Q Consensus       185 PeeVI~kL~etak~LSs~RKKRgK~vPe~LAS~E-------------~Iksyk~tsS~-p~lHSas~pGIlSLdfSpsDg  250 (294)
                      ++..+...+++.. |+..++||  ...+....+-             -...|.+.... ..+|.. .+.|..++.++.++
T Consensus       986 ~~r~~~~~~dL~~-~~~~~~~~--~ss~~~s~p~~~~~ep~~~~~~~p~~gW~p~G~lVAhL~Eh-s~~v~k~a~s~~~~ 1061 (1431)
T KOG1240|consen  986 VERSLTCLNDLEM-LTVSIPKR--PSSESISHPCLLNSEPSAWSVGSPPPGWNPRGILVAHLHEH-SSAVIKLAVSSEHT 1061 (1431)
T ss_pred             hhHHHHHHHhhhh-hhhhcccc--cchhhccchhhhccCCchhhcCCCCCCCCccceEeehhhhc-cccccceeecCCCC
Confidence            4555666666655 44455555  4333322221             12234443321 123432 45677888887566


Q ss_pred             CEEEEecCCCcEEEEeCCCc-------ceEEEeccCCCcEEEEEECCCCCC
Q psy12461        251 SKILTGGNDCQATVFNKDTE-------QVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       251 nlLATGG~DGTVkVWDleTg-------KvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ++++|||.||+|+|||.+.-       +...|+.--..++.+|.+.+.+.|
T Consensus      1062 s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1062 SLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred             ceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence            99999999999999998641       123333323456777766665543

>KOG1274|consensus

Probab=95.63  E-value=0.022  Score=61.56  Aligned_cols=54  Identities=22%  Similarity=0.382  Sum_probs=50.5

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+.+++|+- +++++|.||.|-.|+|-+..+.....+|+||.++|.+|.|+|.+.
T Consensus        98 p~r~~~v~g-~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~  151 (933)
T KOG1274|consen   98 PIRDLAVSG-SGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGN  151 (933)
T ss_pred             cceEEEEec-CCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCC
Confidence            588999997 699999999999999999999999999999999999999999875

>KOG0307|consensus

Probab=95.61  E-value=0.0091  Score=65.31  Aligned_cols=79  Identities=9%  Similarity=0.211  Sum_probs=61.3

Q ss_pred             CCChh---hhccccccccccCCcCC---CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCC--cEEE
Q psy12461        214 LSTAD---NLRAFRNVSSQAGLHSA---SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRK--KVTR  285 (294)
Q Consensus       214 LAS~E---~Iksyk~tsS~p~lHSa---s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTk--kVtS  285 (294)
                      +|+..   +|..|++.....-+|..   ....|.||+|+.....+||+|+.++.+.|||++..+.+-.|.-|..  .+..
T Consensus       132 LASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~  211 (1049)
T KOG0307|consen  132 LASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSV  211 (1049)
T ss_pred             eeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceee
Confidence            55543   78888877643334432   3467999999986678999999999999999999988888877755  4788


Q ss_pred             EEECCCC
Q psy12461        286 VVYHPSE  292 (294)
Q Consensus       286 VaFhPd~  292 (294)
                      |+|||+.
T Consensus       212 l~WhP~~  218 (1049)
T KOG0307|consen  212 LAWHPDH  218 (1049)
T ss_pred             eeeCCCC
Confidence            9999985

>KOG1036|consensus

Probab=95.58  E-value=0.022  Score=55.43  Aligned_cols=55  Identities=13%  Similarity=0.230  Sum_probs=45.2

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .+..+|.+|.|+|+ ++.|+.+++||++++||..+......|+ |..++.+++|.++
T Consensus        11 pP~d~IS~v~f~~~-~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~   65 (323)
T KOG1036|consen   11 PPEDGISSVKFSPS-SSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFADE   65 (323)
T ss_pred             CChhceeeEEEcCc-CCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccCC
Confidence            34678999999985 6667777799999999999887666665 8899999999884

>KOG1272|consensus

Probab=95.50  E-value=0.016  Score=59.17  Aligned_cols=73  Identities=5%  Similarity=0.069  Sum_probs=49.8

Q ss_pred             ChhhhccccccccccCCc-CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        216 TADNLRAFRNVSSQAGLH-SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       216 S~E~Iksyk~tsS~p~lH-Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      +-.+|.-|.+.+..|... -.+...|.+|++++ +|.|+||.|.|..++|||+++-.-+.++.. .-+...++|+.
T Consensus       271 snGtVSlWSP~skePLvKiLcH~g~V~siAv~~-~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sq  344 (545)
T KOG1272|consen  271 SNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDR-GGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQ  344 (545)
T ss_pred             CCceEEecCCCCcchHHHHHhcCCCcceEEECC-CCcEEeecccccceeEeeeccccccceeec-CCCcccccccc
Confidence            334677777766544210 11256799999998 699999999999999999998665555443 23455555543

>KOG0642|consensus

Probab=95.46  E-value=0.012  Score=60.91  Aligned_cols=56  Identities=16%  Similarity=0.188  Sum_probs=48.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC--------cceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT--------EQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT--------gKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+|..++|++. ...|++++.|+++++|+++.        -+.+.+|.+|..+|.||+..+.+.
T Consensus       294 ~d~ir~l~~~~s-ep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~  357 (577)
T KOG0642|consen  294 DDCIRALAFHPS-EPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGE  357 (577)
T ss_pred             hhhhhhhhcCCC-CCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCce
Confidence            678999999985 66899999999999999932        237889999999999999887654

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=95.44  E-value=0.015  Score=37.36  Aligned_cols=24  Identities=17%  Similarity=0.487  Sum_probs=21.6

Q ss_pred             cceEEEeccCCCcEEEEEECCCCC
Q psy12461        270 EQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       270 gKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ++++++|++|+..|++++|+|++.
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~   24 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGN   24 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSS
T ss_pred             CeEEEEEcCCCCcEEEEEEecccc
Confidence            467999999999999999999864

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG0301|consensus

Probab=95.40  E-value=0.017  Score=61.07  Aligned_cols=52  Identities=25%  Similarity=0.397  Sum_probs=37.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ...|.||+... ++. ++||+.|.|++||-+  +++...++||+..|++|++-|++
T Consensus       101 ~snVC~ls~~~-~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~  152 (745)
T KOG0301|consen  101 KSNVCSLSIGE-DGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN  152 (745)
T ss_pred             ccceeeeecCC-cCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCCC
Confidence            45677777653 343 778888888888844  66667788888888888777764

>KOG1538|consensus

Probab=95.32  E-value=0.022  Score=60.69  Aligned_cols=77  Identities=10%  Similarity=0.230  Sum_probs=53.4

Q ss_pred             CCChhhhcccccccccc-CCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        214 LSTADNLRAFRNVSSQA-GLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       214 LAS~E~Iksyk~tsS~p-~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +|..+.+--|+.....- ..-.++..-|.|++|+. ||..+|||+.|+.|.||+..-+-+++  -.|++.|.|..|+|-+
T Consensus        29 lAAg~rlliyD~ndG~llqtLKgHKDtVycVAys~-dGkrFASG~aDK~VI~W~~klEG~Lk--YSH~D~IQCMsFNP~~  105 (1081)
T KOG1538|consen   29 LAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAK-DGKRFASGSADKSVIIWTSKLEGILK--YSHNDAIQCMSFNPIT  105 (1081)
T ss_pred             EecCCEEEEEeCCCcccccccccccceEEEEEEcc-CCceeccCCCceeEEEecccccceee--eccCCeeeEeecCchH
Confidence            33444455555443210 00123467899999997 89999999999999999775444333  2699999999999964


Q ss_pred             C
Q psy12461        293 L  293 (294)
Q Consensus       293 ~  293 (294)
                      .
T Consensus       106 h  106 (1081)
T KOG1538|consen  106 H  106 (1081)
T ss_pred             H
Confidence            3

>KOG1446|consensus

Probab=95.22  E-value=0.068  Score=51.99  Aligned_cols=51  Identities=14%  Similarity=0.219  Sum_probs=44.5

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEEC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYH  289 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFh  289 (294)
                      ..|++|+|++ +|.++++++.|-+++|||..+++.++++.-+.--|..+.|.
T Consensus        15 ~~i~sl~fs~-~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Ft   65 (311)
T KOG1446|consen   15 GKINSLDFSD-DGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFT   65 (311)
T ss_pred             CceeEEEecC-CCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEe
Confidence            4699999998 79999999999999999999999999998776667777663

>KOG2055|consensus

Probab=95.10  E-value=0.046  Score=55.79  Aligned_cols=56  Identities=14%  Similarity=0.273  Sum_probs=47.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCC--CcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKD--TEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle--TgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+|+||.|||+ ..+++++|.|++++||-++  ++..++.+.--.-+|.+..|+|++.
T Consensus       213 ~~~I~sv~FHp~-~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~  270 (514)
T KOG2055|consen  213 HGGITSVQFHPT-APLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGH  270 (514)
T ss_pred             cCCceEEEecCC-CceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCc
Confidence            478999999994 7899999999999999775  4567776655567999999999886

>KOG0299|consensus

Probab=95.03  E-value=0.052  Score=55.16  Aligned_cols=53  Identities=9%  Similarity=0.098  Sum_probs=45.5

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCc----ceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTE----QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTg----KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .|++|+..| ..+++|||+.+|.|+||-++.+    .++..+. =...|++++|+++++
T Consensus       382 Witsla~i~-~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk  438 (479)
T KOG0299|consen  382 WITSLAVIP-GSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGK  438 (479)
T ss_pred             ceeeeEecc-cCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCC
Confidence            699999998 5899999999999999999887    4666665 357899999999875

>KOG2919|consensus

Probab=95.02  E-value=0.024  Score=56.05  Aligned_cols=51  Identities=16%  Similarity=0.261  Sum_probs=44.5

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCCCcEEEEEECCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      =.-.++.| ++++|++|+.||.|++||+.+ +..+..+..|+.-|+.|++||.
T Consensus       300 RI~FDld~-~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~  351 (406)
T KOG2919|consen  300 RILFDLDP-KGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPI  351 (406)
T ss_pred             eEEEecCC-CCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcc
Confidence            34467777 689999999999999999988 7778888899999999999994

>KOG1587|consensus

Probab=94.98  E-value=0.062  Score=55.64  Aligned_cols=56  Identities=16%  Similarity=0.137  Sum_probs=46.4

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcce--EEE----eccCCCcEEEEEECCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQV--VAI----LKGHRKKVTRVVYHPS  291 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKv--V~T----LkGHTkkVtSVaFhPd  291 (294)
                      ....|+|+.|+|.++++||.|..+|.|.+||++.++-  ...    .-.|+.+|+++.|-.+
T Consensus       241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~  302 (555)
T KOG1587|consen  241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQN  302 (555)
T ss_pred             cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEecc
Confidence            3568999999999999999999999999999987654  222    2368899999999664

>KOG2110|consensus

Probab=94.90  E-value=0.067  Score=53.25  Aligned_cols=56  Identities=14%  Similarity=0.276  Sum_probs=46.4

Q ss_pred             CCCEEEEEeccCCCCEEEE-ec-CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILT-GG-NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLAT-GG-~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..|+.+++++. .+.|+|- ++ .-|.|.|||..+-+.+.++..|...+.+++|+++|.
T Consensus       129 ~~gl~AlS~n~-~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~  186 (391)
T KOG2110|consen  129 PKGLCALSPNN-ANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGT  186 (391)
T ss_pred             ccceEeeccCC-CCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCC
Confidence            35688888876 4667773 33 358999999999999999999999999999999974

>KOG1063|consensus

Probab=94.75  E-value=0.042  Score=58.20  Aligned_cols=57  Identities=21%  Similarity=0.247  Sum_probs=49.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCC-----CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGND-----CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~D-----GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      --.|.||+.+| +++++||+-.-     ..|+||+..+-..++.|++|+-.|+.++|+||+++
T Consensus       525 GyEv~~l~~s~-~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~  586 (764)
T KOG1063|consen  525 GYEVYALAISP-TGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRY  586 (764)
T ss_pred             ceeEEEEEecC-CCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcE
Confidence            34699999999 69999987543     35789999998888899999999999999999874

>PRK01742 tolB translocation protein TolB; Provisional

Probab=94.69  E-value=0.057  Score=52.36  Aligned_cols=53  Identities=21%  Similarity=0.270  Sum_probs=41.1

Q ss_pred             CCEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcc--eEEEeccCCCcEEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGND---CQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..+.+.+|+| |++.|+..+.+   ..|++||+.+++  .+..+++|.   .+++|+||+++
T Consensus       204 ~~v~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~---~~~~wSPDG~~  261 (429)
T PRK01742        204 QPLMSPAWSP-DGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHN---GAPAFSPDGSR  261 (429)
T ss_pred             CccccceEcC-CCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCcc---CceeECCCCCE
Confidence            4588999999 79988877644   479999998875  466677764   46899999863

>KOG0650|consensus

Probab=94.62  E-value=0.019  Score=60.23  Aligned_cols=75  Identities=21%  Similarity=0.317  Sum_probs=56.3

Q ss_pred             CChhhhcccccccccc--CCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCC-CcceEEEeccCCCcEEEEEECCC
Q psy12461        215 STADNLRAFRNVSSQA--GLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKD-TEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       215 AS~E~Iksyk~tsS~p--~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle-TgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ||.-.|..|.+....-  .+-. ...-|.+++++| .|+-|+.|+.|+.++.||++ +.++.++|+-|.+.|++|+||+.
T Consensus       584 aTq~~vRiYdL~kqelvKkL~t-g~kwiS~msihp-~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~r  661 (733)
T KOG0650|consen  584 ATQRSVRIYDLSKQELVKKLLT-GSKWISSMSIHP-NGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKR  661 (733)
T ss_pred             EeccceEEEehhHHHHHHHHhc-CCeeeeeeeecC-CCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccc
Confidence            4555666666554310  0110 113588999999 58889999999999999997 45789999999999999999973

>KOG2919|consensus

Probab=94.62  E-value=0.078  Score=52.54  Aligned_cols=55  Identities=18%  Similarity=0.287  Sum_probs=51.3

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      -|.|++|+|.+...+|.|+--..+-||.-..+.++..|-||..-||.+.|++++.
T Consensus       209 iisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn  263 (406)
T KOG2919|consen  209 IISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGN  263 (406)
T ss_pred             eeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcC
Confidence            3679999998888999999999999999999999999999999999999999875

>KOG0644|consensus

Probab=94.62  E-value=0.023  Score=61.44  Aligned_cols=52  Identities=17%  Similarity=0.302  Sum_probs=47.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEEC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYH  289 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFh  289 (294)
                      ...|.|+.|..+ +.+|+||++|..++||..+++.+++++.||+..|+.++-+
T Consensus       190 ~naVyca~fDrt-g~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs  241 (1113)
T KOG0644|consen  190 RNAVYCAIFDRT-GRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVS  241 (1113)
T ss_pred             hhheeeeeeccc-cceEeecCccceeeeeeccchhhhccCCCCccccchhccc
Confidence            567999999984 8999999999999999999999999999999999987654

>KOG1539|consensus

Probab=94.61  E-value=0.017  Score=62.09  Aligned_cols=53  Identities=19%  Similarity=0.255  Sum_probs=45.7

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +.++-.+. ...++|.+-.|-.|.|+|..|.++++.|.||+.+|++..|+||++
T Consensus       537 ~~~iv~hr-~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~Dgr  589 (910)
T KOG1539|consen  537 ITGIVYHR-VSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGR  589 (910)
T ss_pred             cceeeeee-hhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCc
Confidence            44444554 456788888999999999999999999999999999999999987

>KOG4378|consensus

Probab=94.49  E-value=0.068  Score=55.37  Aligned_cols=52  Identities=19%  Similarity=0.340  Sum_probs=47.4

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCCCcEEEEEECCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...+|+|.+ +|.+|+.|...|.|+-||++. .+++.++..|...|++|+|-|.
T Consensus       252 Plstvaf~~-~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s  304 (673)
T KOG4378|consen  252 PLSTVAFSE-CGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPS  304 (673)
T ss_pred             CcceeeecC-CceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeec
Confidence            578999998 799999999999999999985 6799999999999999999775

>KOG0270|consensus

Probab=94.40  E-value=0.096  Score=53.12  Aligned_cols=54  Identities=11%  Similarity=0.155  Sum_probs=48.3

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCCCcEEEEEECCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ..|-.++|++...+.++++..||+++-||+++ ++++.+++.|...|.++.+++.
T Consensus       330 g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~  384 (463)
T KOG0270|consen  330 GEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQ  384 (463)
T ss_pred             cceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCC
Confidence            45778999987778899999999999999987 5999999999999999999875

>KOG1587|consensus

Probab=94.26  E-value=0.058  Score=55.85  Aligned_cols=56  Identities=18%  Similarity=0.278  Sum_probs=48.6

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCC-CcceEEEeccCCCcEEEEEECCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKD-TEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle-TgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .+...|.++.++|-...+|+|+| |-+|+||.-. ....+..++-+.+.|++|+|+|.
T Consensus       396 ~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSpt  452 (555)
T KOG1587|consen  396 THIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPT  452 (555)
T ss_pred             ccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCc
Confidence            34567999999987667788888 9999999998 78889999999999999999995

>KOG2106|consensus

Probab=94.26  E-value=0.13  Score=53.32  Aligned_cols=61  Identities=8%  Similarity=0.154  Sum_probs=47.0

Q ss_pred             CcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-ceEEEec-cCCCcEEEEEECCCCCC
Q psy12461        232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-QVVAILK-GHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       232 lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-KvV~TLk-GHTkkVtSVaFhPd~~Q  294 (294)
                      +|.- ...++++.|+| ++.+||.|+.|+.|+||-++.+ .....+. -|..+|+.+.|++|+++
T Consensus       443 ~~~d-~~~ls~v~ysp-~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~  505 (626)
T KOG2106|consen  443 IHTD-NEQLSVVRYSP-DGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQF  505 (626)
T ss_pred             EEec-CCceEEEEEcC-CCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCce
Confidence            3433 46799999999 7999999999999999998653 3333332 23389999999999864

>KOG0649|consensus

Probab=94.24  E-value=0.075  Score=51.18  Aligned_cols=41  Identities=17%  Similarity=0.296  Sum_probs=33.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG  278 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG  278 (294)
                      ..-|.|+..-. ....|+||+.||+++|||..|+|++.+++.
T Consensus       156 tDYvH~vv~R~-~~~qilsG~EDGtvRvWd~kt~k~v~~ie~  196 (325)
T KOG0649|consen  156 TDYVHSVVGRN-ANGQILSGAEDGTVRVWDTKTQKHVSMIEP  196 (325)
T ss_pred             cceeeeeeecc-cCcceeecCCCccEEEEeccccceeEEecc
Confidence            56688888732 246799999999999999999999988753

>KOG1334|consensus

Probab=94.21  E-value=0.037  Score=56.84  Aligned_cols=69  Identities=14%  Similarity=0.172  Sum_probs=54.7

Q ss_pred             hhhccccccccccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-cCCCcEEEEEECCC
Q psy12461        218 DNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-GHRKKVTRVVYHPS  291 (294)
Q Consensus       218 E~Iksyk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-GHTkkVtSVaFhPd  291 (294)
                      ..+..+.+.... .-|   ...|+.|-|+. .++.++|||.|..|.+||+..++....|. ||..-|....|-|.
T Consensus       127 ~~vqr~~l~~kL-~~H---~GcVntV~FN~-~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~  196 (559)
T KOG1334|consen  127 LFVQRLRLQKKL-NKH---KGCVNTVHFNQ-RGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPF  196 (559)
T ss_pred             HHHHHhhhhhcc-cCC---CCccceeeecc-cCceeeccCccceEEeehhhccCcccccccccccchhhhhccCC
Confidence            355566555433 134   56699999997 69999999999999999999998777665 89999999888885

>KOG0639|consensus

Probab=94.20  E-value=0.025  Score=58.50  Aligned_cols=56  Identities=20%  Similarity=0.305  Sum_probs=45.1

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +..|+.||++++ |+..|-|||-|.+|+.||+++++.+.... -+.-|.++-+.|.+.
T Consensus       550 htDGascIdis~-dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg~cP~~d  605 (705)
T KOG0639|consen  550 HTDGASCIDISK-DGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLGYCPTGD  605 (705)
T ss_pred             CCCCceeEEecC-CCceeecCCCccceeehhhhhhhhhhhhh-hhhhheecccCCCcc
Confidence            578999999997 89999999999999999999987554322 135688888888653

>KOG4378|consensus

Probab=94.10  E-value=0.055  Score=56.05  Aligned_cols=54  Identities=7%  Similarity=0.153  Sum_probs=45.2

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      .....|+|+|.+..+|+|-|.|+.|.+||+...+...+|.- ..+.++|+|.+++
T Consensus       209 AP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y-~~Plstvaf~~~G  262 (673)
T KOG4378|consen  209 APCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTY-SHPLSTVAFSECG  262 (673)
T ss_pred             CCcCcceecCCccceEEEecccceEEEeecccccccceeee-cCCcceeeecCCc
Confidence            34566789998788999999999999999998887777653 3689999999986

>KOG1523|consensus

Probab=94.04  E-value=0.089  Score=51.82  Aligned_cols=56  Identities=20%  Similarity=0.224  Sum_probs=45.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeC-CCcc--eEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNK-DTEQ--VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDl-eTgK--vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+| ..+.|+||+.|.+.+||.. ..++  ..-.|.-|...+++|.|+|.+.
T Consensus        55 d~~vtgvdWap-~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~en  113 (361)
T KOG1523|consen   55 DKIVTGVDWAP-KSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKEN  113 (361)
T ss_pred             CcceeEEeecC-CCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCc
Confidence            45699999999 5889999999999999998 4443  4445667889999999999753

>KOG3914|consensus

Probab=93.94  E-value=0.05  Score=54.25  Aligned_cols=39  Identities=8%  Similarity=0.166  Sum_probs=33.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK  277 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk  277 (294)
                      ..-|..+++-+  +..|+|||.|+++++||+.+|+.+.++.
T Consensus       194 ~eFVS~isl~~--~~~LlS~sGD~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  194 KEFVSTISLTD--NYLLLSGSGDKTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             Hhheeeeeecc--CceeeecCCCCcEEEEecccCCcccccc
Confidence            45688899885  4568999999999999999999987764

>PRK05137 tolB translocation protein TolB; Provisional

Probab=93.90  E-value=0.16  Score=49.24  Aligned_cols=55  Identities=9%  Similarity=0.078  Sum_probs=42.9

Q ss_pred             CCEEEEEeccCCCCEEEEec---CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGG---NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG---~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..+.+.+|+| |++.|+..+   .+..|.+||+.+++. ..+..+...+.+..|+||+++
T Consensus       202 ~~v~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~g~~~~~~~SPDG~~  259 (435)
T PRK05137        202 SLVLTPRFSP-NRQEITYMSYANGRPRVYLLDLETGQR-ELVGNFPGMTFAPRFSPDGRK  259 (435)
T ss_pred             CCeEeeEECC-CCCEEEEEEecCCCCEEEEEECCCCcE-EEeecCCCcccCcEECCCCCE
Confidence            4689999999 788887654   357899999998875 345555667889999999863

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=93.90  E-value=0.13  Score=53.35  Aligned_cols=54  Identities=13%  Similarity=0.226  Sum_probs=42.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.|.+++| +.+.++.|-.||+|.+||...+...  +.-+.=..+.++|||++.
T Consensus       259 ~s~v~~ca~sp-~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~ga  312 (545)
T PF11768_consen  259 PSQVICCARSP-SEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGA  312 (545)
T ss_pred             CCcceEEecCc-ccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCc
Confidence            35799999999 5788999999999999999777433  333345678999999863

>PRK01742 tolB translocation protein TolB; Provisional

Probab=93.62  E-value=0.065  Score=51.96  Aligned_cols=51  Identities=16%  Similarity=0.126  Sum_probs=44.5

Q ss_pred             EEEEeccCCCCEEEEecCCCcEEEEeC--CCcceEEEeccCCCcEEEEEECCCC
Q psy12461        241 LAMDIQVEDTSKILTGGNDCQATVFNK--DTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~DGTVkVWDl--eTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      .+++|+| ++.+|++++.|+.+.+|++  .+++.+++|.+|...|..++|+|--
T Consensus       375 ~~~~~sP-dG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~~  427 (429)
T PRK01742        375 ESPSISP-NGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPYL  427 (429)
T ss_pred             CCceECC-CCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCCC
Confidence            4578999 7999999999999999987  3688999999999999999999853

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=93.46  E-value=0.2  Score=35.85  Aligned_cols=32  Identities=19%  Similarity=0.150  Sum_probs=28.2

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ  271 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK  271 (294)
                      ..|.+++|+| ..++||.|..||.|.||-+ +++
T Consensus        12 ~~v~~~~w~P-~mdLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen   12 SRVSCMSWCP-TMDLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CcEEEEEECC-CCCEEEEEECCCeEEEEEC-CCc
Confidence            4699999999 5899999999999999988 544

>KOG2055|consensus

Probab=93.36  E-value=0.078  Score=54.19  Aligned_cols=52  Identities=10%  Similarity=0.268  Sum_probs=43.6

Q ss_pred             EEEEeccCCCCEEEEecCCCcEEEEeCCC------cceEEEeccCCCcEEEEEECCCCC
Q psy12461        241 LAMDIQVEDTSKILTGGNDCQATVFNKDT------EQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~DGTVkVWDleT------gKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ++++.++ ++.|||||+.-|.|.|||..+      -+++.++..=+..|++++|+|+..
T Consensus       391 ts~~~S~-ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~q  448 (514)
T KOG2055|consen  391 TSLCISL-NGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQ  448 (514)
T ss_pred             eeeeecC-CCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchh
Confidence            5666666 588999999999999999754      368888888889999999999853

>KOG2048|consensus

Probab=93.35  E-value=0.19  Score=53.18  Aligned_cols=36  Identities=17%  Similarity=0.278  Sum_probs=32.6

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA  274 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~  274 (294)
                      ..|+||+|+| ++..|++|+.||.|++||..+++.+.
T Consensus       155 sRvLslsw~~-~~~~i~~Gs~Dg~Iriwd~~~~~t~~  190 (691)
T KOG2048|consen  155 SRVLSLSWNP-TGTKIAGGSIDGVIRIWDVKSGQTLH  190 (691)
T ss_pred             ceEEEEEecC-CccEEEecccCceEEEEEcCCCceEE
Confidence            5799999999 57779999999999999999998776

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=93.08  E-value=0.27  Score=47.83  Aligned_cols=52  Identities=17%  Similarity=0.201  Sum_probs=40.0

Q ss_pred             EEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        241 LAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..+.|+| |+.++.+.+.|+.|.++|+.+.+++++++... ...++++++|+++
T Consensus        40 ~~~~~s~-Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG~~   91 (369)
T PF02239_consen   40 AGLKFSP-DGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIAVSPDGKY   91 (369)
T ss_dssp             EEEE-TT--SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEEE--TTTE
T ss_pred             eEEEecC-CCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEEEcCCCCE
Confidence            4467888 79988888899999999999999999998764 4678999999873

...

>KOG2096|consensus

Probab=92.88  E-value=0.25  Score=49.08  Aligned_cols=53  Identities=11%  Similarity=0.207  Sum_probs=41.6

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      |..+-+.. ++.||+|++.|.+|.|||+. |+++.++......-+..+.+|++++
T Consensus       190 ~i~iGiA~-~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRF  242 (420)
T KOG2096|consen  190 IINIGIAG-NAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRF  242 (420)
T ss_pred             eEEEeecC-CceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcE
Confidence            34444443 47899999999999999998 9999998877666777777887764

>KOG1523|consensus

Probab=92.83  E-value=0.25  Score=48.73  Aligned_cols=54  Identities=20%  Similarity=0.247  Sum_probs=49.1

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc---eEEEeccCCCcEEEEEECCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ---VVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK---vV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ..|+|.+|++ |...+|.+-+.+.|.||.....+   ..++|+.|.+.|+.|.|.|..
T Consensus        11 ~pitchAwn~-drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~s   67 (361)
T KOG1523|consen   11 EPITCHAWNS-DRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKS   67 (361)
T ss_pred             CceeeeeecC-CCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCC
Confidence            5699999998 89999999999999999998765   788999999999999999864

>KOG2139|consensus

Probab=92.59  E-value=0.28  Score=49.35  Aligned_cols=55  Identities=13%  Similarity=0.207  Sum_probs=43.8

Q ss_pred             CCEEEEEeccCCCCEEEEecC-CCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGN-DCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~-DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..|+++.|++ |+..++|++- |..|.|||.++++.+--..-.-.-++-+.|+||+.
T Consensus       196 ~pVtsmqwn~-dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd  251 (445)
T KOG2139|consen  196 NPVTSMQWNE-DGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGD  251 (445)
T ss_pred             ceeeEEEEcC-CCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCC
Confidence            3599999998 7999988775 58899999999886654423346788999999975

>KOG1188|consensus

Probab=92.47  E-value=0.16  Score=50.38  Aligned_cols=53  Identities=23%  Similarity=0.475  Sum_probs=42.6

Q ss_pred             CEEEEEeccCCCCEEEEe----cCCCcEEEEeCCCcce-EEE-eccCCCcEEEEEECCCC
Q psy12461        239 GILAMDIQVEDTSKILTG----GNDCQATVFNKDTEQV-VAI-LKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATG----G~DGTVkVWDleTgKv-V~T-LkGHTkkVtSVaFhPd~  292 (294)
                      .-.|++.+- +.+++++|    ..|-.+.+||++..+. ++. .+.|...||+|.|||++
T Consensus       119 ~f~~ld~nc-k~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~  177 (376)
T KOG1188|consen  119 PFICLDLNC-KKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSD  177 (376)
T ss_pred             cceEeeccC-cCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCC
Confidence            467888875 47788887    4678899999997654 665 46899999999999974

>KOG2079|consensus

Probab=92.20  E-value=0.21  Score=55.36  Aligned_cols=53  Identities=21%  Similarity=0.354  Sum_probs=48.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ..+|+|++|+. ++.+++.|=.+|.|.+||..++++++-+.-|..++++|.++.
T Consensus       130 ~~~Vtsvafn~-dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~  182 (1206)
T KOG2079|consen  130 QGPVTSVAFNQ-DGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVG  182 (1206)
T ss_pred             CCcceeeEecC-CCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEE
Confidence            46899999996 799999999999999999999999999999999999887754

>KOG1963|consensus

Probab=92.10  E-value=0.27  Score=52.92  Aligned_cols=54  Identities=15%  Similarity=0.282  Sum_probs=47.3

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..|++|+|++ +|.+|+|||..+...+|-+.|++ -+-|.-=..+|..+.|+||+.
T Consensus       252 ~~V~~L~fS~-~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~  305 (792)
T KOG1963|consen  252 DEVNSLSFSS-DGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSD  305 (792)
T ss_pred             cccceeEEec-CCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCC
Confidence            5799999998 79999999999999999999988 445565668999999999874

>KOG1524|consensus

Probab=91.86  E-value=0.1  Score=54.59  Aligned_cols=57  Identities=14%  Similarity=0.238  Sum_probs=46.2

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ++-..|+|-.|+| ||.-++|.|.||.|++|.. +|-+..++--...+|.|++|.|+..
T Consensus       102 AH~~A~~~gRW~~-dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~  158 (737)
T KOG1524|consen  102 AHAAAISSGRWSP-DGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSN  158 (737)
T ss_pred             hhhhhhhhcccCC-CCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCC
Confidence            3456788999998 8999999999999999986 4555556655668999999999753

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=91.80  E-value=0.36  Score=45.26  Aligned_cols=53  Identities=15%  Similarity=0.029  Sum_probs=39.8

Q ss_pred             CEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGND---CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+.+.+|+| |+++|+....+   ..|++||+.+++... +..+...+.++.|+|+++
T Consensus       191 ~~~~p~~Sp-dg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~  246 (417)
T TIGR02800       191 PILSPAWSP-DGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGS  246 (417)
T ss_pred             ceecccCCC-CCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCC
Confidence            478889999 78888876543   589999999886533 334455677899999975

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2321|consensus

Probab=91.78  E-value=0.29  Score=51.50  Aligned_cols=75  Identities=11%  Similarity=0.177  Sum_probs=53.5

Q ss_pred             ChhhhccccccccccCCc--CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCC-----------c
Q psy12461        216 TADNLRAFRNVSSQAGLH--SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRK-----------K  282 (294)
Q Consensus       216 S~E~Iksyk~tsS~p~lH--Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTk-----------k  282 (294)
                      +..+|..+.+....+ +.  ....++++++++++ -..+|++|+.||.|..||.++.+.+.+|..-+.           .
T Consensus       153 sg~evYRlNLEqGrf-L~P~~~~~~~lN~v~in~-~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~s  230 (703)
T KOG2321|consen  153 SGSEVYRLNLEQGRF-LNPFETDSGELNVVSINE-EHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPS  230 (703)
T ss_pred             cCcceEEEEcccccc-ccccccccccceeeeecC-ccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCc
Confidence            444565555544321 11  12347899999998 467999999999999999999887777753322           4


Q ss_pred             EEEEEECCCC
Q psy12461        283 VTRVVYHPSE  292 (294)
Q Consensus       283 VtSVaFhPd~  292 (294)
                      |+++.|+.++
T Consensus       231 vTal~F~d~g  240 (703)
T KOG2321|consen  231 VTALKFRDDG  240 (703)
T ss_pred             ceEEEecCCc
Confidence            9999998764

>PRK02889 tolB translocation protein TolB; Provisional

Probab=91.54  E-value=0.47  Score=46.17  Aligned_cols=54  Identities=11%  Similarity=0.063  Sum_probs=39.0

Q ss_pred             CCEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGND---CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+.+|+| |++.|+..+.+   ..|.+||+.+++... +......+.+..|+||++
T Consensus       196 ~~v~~p~wSP-DG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~  252 (427)
T PRK02889        196 EPIISPAWSP-DGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGR  252 (427)
T ss_pred             CCcccceEcC-CCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCC
Confidence            4588999999 78888766543   459999999887533 222223467899999986

>KOG0280|consensus

Probab=91.53  E-value=0.36  Score=47.34  Aligned_cols=54  Identities=20%  Similarity=0.220  Sum_probs=44.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ..||.|+.-+|.++.+|+||+-|-+|++||.++ ++.+..-+. .+-|+.+.+||.
T Consensus       210 ~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v-~GGVWRi~~~p~  264 (339)
T KOG0280|consen  210 TSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKV-GGGVWRIKHHPE  264 (339)
T ss_pred             ecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCcc-ccceEEEEecch
Confidence            569999999987888999999999999999995 676654332 267999999985

>KOG0322|consensus

Probab=91.15  E-value=0.15  Score=49.54  Aligned_cols=30  Identities=13%  Similarity=0.296  Sum_probs=27.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNK  267 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDl  267 (294)
                      ..+|++|+|+| +.+++|.+|.|+.|-+|++
T Consensus       293 sagvn~vAfsp-d~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  293 SAGVNAVAFSP-DCELMAAASKDARISLWKL  322 (323)
T ss_pred             hcceeEEEeCC-CCchhhhccCCceEEeeec
Confidence            46899999999 6899999999999999986

>KOG2445|consensus

Probab=90.69  E-value=0.77  Score=45.37  Aligned_cols=55  Identities=18%  Similarity=0.155  Sum_probs=43.7

Q ss_pred             CCCEEEEEec-cCCCCEEEEecCCCcEEEEeCCC------c---ceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQ-VEDTSKILTGGNDCQATVFNKDT------E---QVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfS-psDgnlLATGG~DGTVkVWDleT------g---KvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|-.|.|- |.-|..+||++-|+++.||.-+.      +   ....+|..-...|++|.|.|.
T Consensus        59 ~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~  123 (361)
T KOG2445|consen   59 DGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPK  123 (361)
T ss_pred             CCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecch
Confidence            4569999985 54578899999999999996521      1   146688888899999999985

>KOG2041|consensus

Probab=90.62  E-value=0.43  Score=51.68  Aligned_cols=53  Identities=21%  Similarity=0.340  Sum_probs=44.1

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc---------------eEEEeccCCCcEEEEEECCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ---------------VVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK---------------vV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ...|++|+. ...|||+||.||.++|--+.+..               .-++|+||...|.-|.|+..+
T Consensus        16 kL~c~~WNk-e~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~   83 (1189)
T KOG2041|consen   16 KLHCAEWNK-ESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENN   83 (1189)
T ss_pred             eEEEEEEcc-cCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccc
Confidence            478999997 58899999999999998776532               245789999999999998754

>KOG2106|consensus

Probab=90.54  E-value=0.72  Score=48.06  Aligned_cols=53  Identities=13%  Similarity=0.233  Sum_probs=46.3

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      .-|+|++|.+ +++ ++||..+|+|.||+..+.++.++...|.+-|.++..-.++
T Consensus       247 k~Vl~v~F~e-ngd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~G  299 (626)
T KOG2106|consen  247 KFVLCVTFLE-NGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDG  299 (626)
T ss_pred             eEEEEEEEcC-CCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCc
Confidence            4699999998 454 7999999999999999999999888999999999876554

>KOG1034|consensus

Probab=90.38  E-value=0.18  Score=50.02  Aligned_cols=45  Identities=20%  Similarity=0.320  Sum_probs=41.6

Q ss_pred             CCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        250 TSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       250 gnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..++|.||.-|.|+|.|+.++++...+.||...|+.+.|+|+..|
T Consensus       105 ~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~q  149 (385)
T KOG1034|consen  105 NPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQ  149 (385)
T ss_pred             CeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCc
Confidence            348899999999999999999999999999999999999998754

>KOG1645|consensus

Probab=90.06  E-value=0.33  Score=49.23  Aligned_cols=55  Identities=9%  Similarity=0.033  Sum_probs=48.8

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..|..|+|+|.+..++..++.+.+|+|+|+++..++.++..| +.+++++|.-+++
T Consensus       194 ~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~  248 (463)
T KOG1645|consen  194 SFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDER  248 (463)
T ss_pred             hhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCc
Confidence            358899999965558999999999999999999999999999 9999999987754

>KOG1064|consensus

Probab=89.47  E-value=0.18  Score=58.56  Aligned_cols=46  Identities=13%  Similarity=0.308  Sum_probs=40.6

Q ss_pred             CcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc
Q psy12461        232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG  278 (294)
Q Consensus       232 lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG  278 (294)
                      .|.++..|++++++-| ...+|+|||.+|.|+|||++..+++++++.
T Consensus      2331 v~~~H~~gaT~l~~~P-~~qllisggr~G~v~l~D~rqrql~h~~~~ 2376 (2439)
T KOG1064|consen 2331 VHTCHDGGATVLAYAP-KHQLLISGGRKGEVCLFDIRQRQLRHTFQA 2376 (2439)
T ss_pred             eeeecCCCceEEEEcC-cceEEEecCCcCcEEEeehHHHHHHHHhhh
Confidence            5777788999999999 578999999999999999999888877753

>PRK04922 tolB translocation protein TolB; Provisional

Probab=89.35  E-value=0.67  Score=44.99  Aligned_cols=54  Identities=17%  Similarity=0.057  Sum_probs=39.1

Q ss_pred             CCEEEEEeccCCCCEEEEecC---CCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGN---DCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~---DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+.+|+| |++.|+..+.   +..|++||+.+++.. .+..+.....++.|+|+++
T Consensus       204 ~~v~~p~wSp-Dg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG~  260 (433)
T PRK04922        204 EPILSPAWSP-DGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSPDGR  260 (433)
T ss_pred             CccccccCCC-CCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECCCCC
Confidence            4588999999 7888887663   346999999887643 2333334456789999986

>KOG2315|consensus

Probab=89.18  E-value=0.7  Score=48.17  Aligned_cols=59  Identities=14%  Similarity=0.094  Sum_probs=47.2

Q ss_pred             cCCCCCCEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        233 HSASVPGILAMDIQVEDTSKILTGGND---CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       233 HSas~pGIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +......=+++-|+| .+++|+-+|-+   |.+-|||+.+.+++.+++.  ...+-+.|+||+++
T Consensus       307 ~df~egpRN~~~fnp-~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a--~~tt~~eW~PdGe~  368 (566)
T KOG2315|consen  307 FDFPEGPRNTAFFNP-HGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA--ANTTVFEWSPDGEY  368 (566)
T ss_pred             EeCCCCCccceEECC-CCCEEEEeecCCCCCceEEEeccchhhcccccc--CCceEEEEcCCCcE
Confidence            344455668899999 69998877654   8899999999999999986  45677899999864

>PRK03629 tolB translocation protein TolB; Provisional

Probab=89.09  E-value=0.89  Score=44.46  Aligned_cols=53  Identities=17%  Similarity=0.117  Sum_probs=38.4

Q ss_pred             EEEEEeccCCCCEEEE-ecCCC--cEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        240 ILAMDIQVEDTSKILT-GGNDC--QATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       240 IlSLdfSpsDgnlLAT-GG~DG--TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +.+++|+| |++.|+. ...++  .|++||+.++++.. +..+...+....|+||+++
T Consensus       245 ~~~~~~SP-DG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~  300 (429)
T PRK03629        245 NGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQN  300 (429)
T ss_pred             cCCeEECC-CCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCE
Confidence            44678999 7887764 34454  58899999887654 4444467889999999863

>KOG2139|consensus

Probab=89.06  E-value=0.89  Score=45.86  Aligned_cols=56  Identities=11%  Similarity=0.197  Sum_probs=43.5

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-ceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-QVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-KvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .+|++-|.||| |+++|+.+.-|+..+||..... ...+-.-+ +..|+...|+|+++.
T Consensus       238 lgg~slLkwSP-dgd~lfaAt~davfrlw~e~q~wt~erw~lg-sgrvqtacWspcGsf  294 (445)
T KOG2139|consen  238 LGGFSLLKWSP-DGDVLFAATCDAVFRLWQENQSWTKERWILG-SGRVQTACWSPCGSF  294 (445)
T ss_pred             CCceeeEEEcC-CCCEEEEecccceeeeehhcccceecceecc-CCceeeeeecCCCCE
Confidence            46899999999 7999999999999999966443 23332223 349999999999873

>KOG0321|consensus

Probab=88.96  E-value=0.37  Score=51.05  Aligned_cols=46  Identities=33%  Similarity=0.509  Sum_probs=40.4

Q ss_pred             eccCCCCEEEEecCCCcEEEEeCCCc-ceEEEeccCCCcEEEEEECCC
Q psy12461        245 IQVEDTSKILTGGNDCQATVFNKDTE-QVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       245 fSpsDgnlLATGG~DGTVkVWDleTg-KvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ++| |+.+|++|+.|..+++|.+.+- .....|.||+-.|++|+|.|.
T Consensus       325 lSp-d~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS  371 (720)
T KOG0321|consen  325 LSP-DDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPS  371 (720)
T ss_pred             cCC-CCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccc
Confidence            456 7889999999999999999875 467788999999999999885

>KOG4532|consensus

Probab=88.87  E-value=0.84  Score=44.62  Aligned_cols=54  Identities=4%  Similarity=-0.070  Sum_probs=42.0

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-----EeccCCCcEEEEEECCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-----ILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-----TLkGHTkkVtSVaFhPd~  292 (294)
                      .+--|.+|+. ....+|++..||++.|||++......     +-..|.+.|..+.|++-+
T Consensus       204 D~gF~~S~s~-~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g  262 (344)
T KOG4532|consen  204 DHGFYNSFSE-NDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYG  262 (344)
T ss_pred             CCceeeeecc-CcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCC
Confidence            3456788997 46789999999999999998754332     234688999999999744

>PRK02889 tolB translocation protein TolB; Provisional

Probab=88.87  E-value=0.68  Score=45.08  Aligned_cols=54  Identities=13%  Similarity=0.094  Sum_probs=39.3

Q ss_pred             CEEEEEeccCCCCEEE-EecCCCcEEEEeC--CCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKIL-TGGNDCQATVFNK--DTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLA-TGG~DGTVkVWDl--eTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .+.+.+|+| |++.|+ +.+.|+...||.+  .+++ +..|..|...+.+..|+||+++
T Consensus       241 ~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~  297 (427)
T PRK02889        241 SNSAPAWSP-DGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRS  297 (427)
T ss_pred             CccceEECC-CCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCE
Confidence            356789999 687665 6778888777765  4444 5667767667788999999863

>PRK00178 tolB translocation protein TolB; Provisional

Probab=88.46  E-value=1.2  Score=42.68  Aligned_cols=54  Identities=17%  Similarity=0.067  Sum_probs=37.9

Q ss_pred             CCEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGND---CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+.+|+| |++.|+..+.+   ..|.+||+.+++... +......+.+..|+|+++
T Consensus       199 ~~~~~p~wSp-DG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~  255 (430)
T PRK00178        199 EPILSPRWSP-DGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGS  255 (430)
T ss_pred             CceeeeeECC-CCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCC
Confidence            3578899999 78888765533   468999999886433 222223456789999986

>KOG1963|consensus

Probab=88.19  E-value=0.89  Score=49.16  Aligned_cols=53  Identities=13%  Similarity=0.282  Sum_probs=43.9

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCC--c--ceEEEeccCCCcEEEEEECCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDT--E--QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleT--g--KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ++|.++|| +++++|+|..||.|.||.--.  .  ...+.|.=|..+|++++|++++.
T Consensus       208 ~t~~~~sp-n~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~  264 (792)
T KOG1963|consen  208 ITCVALSP-NERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGA  264 (792)
T ss_pred             ceeEEecc-ccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCc
Confidence            89999999 599999999999999994322  1  23556777999999999999874

>KOG4547|consensus

Probab=88.11  E-value=1.1  Score=46.76  Aligned_cols=58  Identities=12%  Similarity=0.114  Sum_probs=52.5

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +..+|+++.++. +-..|-|+|+|..+.+|+..+++.++.+++-...+.+++.+||+++
T Consensus       101 h~~~v~~~~~~~-~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~  158 (541)
T KOG4547|consen  101 HYGNVNEILDAQ-RLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKI  158 (541)
T ss_pred             CCCcceeeeccc-ccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCE
Confidence            367899999886 5778999999999999999999999999999999999999999753

>KOG4227|consensus

Probab=87.88  E-value=0.75  Score=47.00  Aligned_cols=55  Identities=18%  Similarity=0.388  Sum_probs=43.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC------cceEEEecc-CCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT------EQVVAILKG-HRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT------gKvV~TLkG-HTkkVtSVaFhPd~  292 (294)
                      ...|++|.|+. ++.+||+||.|..+.||.++.      -+++..... |..-|.|++|.-.+
T Consensus        56 ~GCiNAlqFS~-N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N  117 (609)
T KOG4227|consen   56 TGCINALQFSH-NDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLEN  117 (609)
T ss_pred             ccccceeeecc-CCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCC
Confidence            45699999997 588999999999999999864      345554433 45789999997654

>PRK04922 tolB translocation protein TolB; Provisional

Probab=87.69  E-value=1  Score=43.74  Aligned_cols=53  Identities=19%  Similarity=0.139  Sum_probs=39.0

Q ss_pred             EEEEEeccCCCCEEE-EecCCC--cEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        240 ILAMDIQVEDTSKIL-TGGNDC--QATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       240 IlSLdfSpsDgnlLA-TGG~DG--TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..+++|+| |++.|+ +.+.++  .|++||+.++++ ..+..|........|+||+++
T Consensus       250 ~~~~~~Sp-DG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~  305 (433)
T PRK04922        250 NGAPSFSP-DGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKS  305 (433)
T ss_pred             ccCceECC-CCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCE
Confidence            34688999 677654 555555  599999998875 456667666788999999864

>PRK05137 tolB translocation protein TolB; Provisional

Probab=87.17  E-value=1.2  Score=43.18  Aligned_cols=54  Identities=15%  Similarity=0.106  Sum_probs=39.9

Q ss_pred             CEEEEEeccCCCCEE-EEecCCCc--EEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKI-LTGGNDCQ--ATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlL-ATGG~DGT--VkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .+.+.+|+| |++.| ++.+.|+.  |++||+.++++ ..|..|....+...|+||+++
T Consensus       247 ~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~  303 (435)
T PRK05137        247 MTFAPRFSP-DGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQ  303 (435)
T ss_pred             cccCcEECC-CCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCE
Confidence            456788999 67765 46666665  77779988775 557777777888999999863

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=86.92  E-value=1.2  Score=40.95  Aligned_cols=53  Identities=15%  Similarity=0.181  Sum_probs=35.4

Q ss_pred             EEEEeccCCCCEEEEe-cCCCcEEEEeCCCcceEEEeccCC---CcEEEEEECCCCCC
Q psy12461        241 LAMDIQVEDTSKILTG-GNDCQATVFNKDTEQVVAILKGHR---KKVTRVVYHPSELQ  294 (294)
Q Consensus       241 lSLdfSpsDgnlLATG-G~DGTVkVWDleTgKvV~TLkGHT---kkVtSVaFhPd~~Q  294 (294)
                      ..+.|+| ++++++++ ..+++|.+||+++.....++.+|.   .....+.|+|++++
T Consensus       231 ~~i~~~p-dg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~  287 (330)
T PRK11028        231 ADIHITP-DGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKY  287 (330)
T ss_pred             eeEEECC-CCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCE
Confidence            4688999 68877776 458999999996543222333332   24557899998763

>PRK00178 tolB translocation protein TolB; Provisional

Probab=86.86  E-value=1.3  Score=42.51  Aligned_cols=53  Identities=17%  Similarity=0.071  Sum_probs=38.4

Q ss_pred             EEEEEeccCCCCEEE-EecCCC--cEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        240 ILAMDIQVEDTSKIL-TGGNDC--QATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       240 IlSLdfSpsDgnlLA-TGG~DG--TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +.+.+|+| |++.|+ +...++  .|++||+.+++. ..|..+...+....|+|++++
T Consensus       245 ~~~~~~Sp-DG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~~spDg~~  300 (430)
T PRK00178        245 NGAPAWSP-DGSKLAFVLSKDGNPEIYVMDLASRQL-SRVTNHPAIDTEPFWGKDGRT  300 (430)
T ss_pred             cCCeEECC-CCCEEEEEEccCCCceEEEEECCCCCe-EEcccCCCCcCCeEECCCCCE
Confidence            44688999 687665 454454  688889998875 446666667788899999863

>KOG1272|consensus

Probab=86.69  E-value=0.36  Score=49.69  Aligned_cols=78  Identities=10%  Similarity=0.103  Sum_probs=59.4

Q ss_pred             CCCCChhhhccccccccccCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        212 EDLSTADNLRAFRNVSSQAGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       212 e~LAS~E~Iksyk~tsS~p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .+|++-.+|..-++.+++.    +....+..+.-+|. +.++-+|...|+|-+|.......+..+--|..+|.+|+++++
T Consensus       230 ~G~L~Y~DVS~GklVa~~~----t~~G~~~vm~qNP~-NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~  304 (545)
T KOG1272|consen  230 AGFLKYQDVSTGKLVASIR----TGAGRTDVMKQNPY-NAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRG  304 (545)
T ss_pred             CCceEEEeechhhhhHHHH----ccCCccchhhcCCc-cceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCC
Confidence            3455545555555555442    22345777788884 568899999999999999999888888889999999999998


Q ss_pred             CCC
Q psy12461        292 ELQ  294 (294)
Q Consensus       292 ~~Q  294 (294)
                      +++
T Consensus       305 G~Y  307 (545)
T KOG1272|consen  305 GRY  307 (545)
T ss_pred             CcE
Confidence            864

>KOG1310|consensus

Probab=86.62  E-value=0.95  Score=47.79  Aligned_cols=53  Identities=21%  Similarity=0.304  Sum_probs=45.6

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      |.-..|--..+.|+++|+.||.-.||+..++++++.+.|.+..|+|+.-||..
T Consensus       626 IKeanFlGqrgeyiasgSddgr~fiwek~tg~i~av~~gdssivnciqghP~~  678 (758)
T KOG1310|consen  626 IKEANFLGQRGEYIASGSDDGRFFIWEKLTGSILAVIHGDSSIVNCIQGHPRC  678 (758)
T ss_pred             cccccccccCCCeeeEecCCCceEEeecCCcceEEEeeCchhheeeccCCCCC
Confidence            44455544468899999999999999999999999999999999999988863

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=86.12  E-value=1.5  Score=40.25  Aligned_cols=53  Identities=13%  Similarity=0.246  Sum_probs=35.3

Q ss_pred             CEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEE-------EeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVA-------ILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~-------TLkGHTkkVtSVaFhPd~~  293 (294)
                      +..+++|+| +++++ ++...++.|.|||+.+...+.       ++... .....++|+|+++
T Consensus       127 ~~~~~~~~p-~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g-~~p~~~~~~pdg~  187 (330)
T PRK11028        127 GCHSANIDP-DNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEG-AGPRHMVFHPNQQ  187 (330)
T ss_pred             cccEeEeCC-CCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCC-CCCceEEECCCCC
Confidence            356678998 57766 566677999999998743221       12212 2356789999876

>KOG3881|consensus

Probab=86.11  E-value=1.4  Score=44.55  Aligned_cols=54  Identities=20%  Similarity=0.307  Sum_probs=48.4

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEE-eccCCCcEEEEEECCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAI-LKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~T-LkGHTkkVtSVaFhPd~  292 (294)
                      .+|+++..-| ++++|.+|..-+.+..||+++++++.. |+|-++.|+++..||..
T Consensus       248 ~~is~~~l~p-~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~  302 (412)
T KOG3881|consen  248 NPISSTGLTP-SGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTH  302 (412)
T ss_pred             CcceeeeecC-CCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCC
Confidence            4677888778 699999999999999999999998876 99999999999999974

>PRK03629 tolB translocation protein TolB; Provisional

Probab=85.23  E-value=1  Score=44.03  Aligned_cols=49  Identities=10%  Similarity=0.110  Sum_probs=39.4

Q ss_pred             EEEEeccCCCCEEEEecCCCc---EEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        241 LAMDIQVEDTSKILTGGNDCQ---ATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~DGT---VkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .+.+|+| |+.+|+..+.|+.   +.+|++ +++....|.+|...+...+|+|-
T Consensus       377 ~~p~~Sp-DG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp~  428 (429)
T PRK03629        377 ETPSIAP-NGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSPY  428 (429)
T ss_pred             CCceECC-CCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCcccCCC
Confidence            3567998 7999998888875   556666 57777889999999999999983

>PRK01029 tolB translocation protein TolB; Provisional

Probab=84.50  E-value=2.2  Score=41.98  Aligned_cols=53  Identities=15%  Similarity=0.014  Sum_probs=38.5

Q ss_pred             CEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGND---CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+.+.+|+| |++.|+..+.+   ..|.+||+.+++... |......+.+..|+||++
T Consensus       328 ~~~~p~wSP-DG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~  383 (428)
T PRK01029        328 NSSCPAWSP-DGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSL  383 (428)
T ss_pred             CccceeECC-CCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCC
Confidence            456788999 78877755433   479999999987644 433334678899999976

>KOG3881|consensus

Probab=83.92  E-value=1.4  Score=44.42  Aligned_cols=53  Identities=9%  Similarity=0.151  Sum_probs=40.5

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|.+|-.+| ...++|++|-|..++|||+++.++++..-- ....+++.+.++
T Consensus       290 tGsirsih~hp-~~~~las~GLDRyvRIhD~ktrkll~kvYv-Ks~lt~il~~~~  342 (412)
T KOG3881|consen  290 TGSIRSIHCHP-THPVLASCGLDRYVRIHDIKTRKLLHKVYV-KSRLTFILLRDD  342 (412)
T ss_pred             cCCcceEEEcC-CCceEEeeccceeEEEeecccchhhhhhhh-hccccEEEecCC
Confidence            35688899998 478999999999999999999887764321 135677777553

>KOG2048|consensus

Probab=83.64  E-value=3.6  Score=43.98  Aligned_cols=73  Identities=10%  Similarity=0.140  Sum_probs=57.7

Q ss_pred             hhccccccccc---cCCcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        219 NLRAFRNVSSQ---AGLHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       219 ~Iksyk~tsS~---p~lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .|..|.+...+   +-+|-.....|-+|+|++  +..|.|.|.+|.|.=||+.+.+....+.--...|++++-+|.+.
T Consensus        48 ~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e--~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~  123 (691)
T KOG2048|consen   48 NIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE--GGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENT  123 (691)
T ss_pred             cEEEEccCCCceeeEEEecCCCCceeeEEEcc--CCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccc
Confidence            45555555432   124554556799999995  56788888999999999999999999998889999999999765

>KOG1007|consensus

Probab=83.63  E-value=0.95  Score=44.62  Aligned_cols=54  Identities=13%  Similarity=0.231  Sum_probs=44.1

Q ss_pred             CEEEEEecc-CCCCEEEEecCCCcEEEEeCCCcceEEEec-cCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQV-EDTSKILTGGNDCQATVFNKDTEQVVAILK-GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSp-sDgnlLATGG~DGTVkVWDleTgKvV~TLk-GHTkkVtSVaFhPd~~  293 (294)
                      ..++-+|+| -+++.+++.+ |+++..||++|.+....++ .|...|.++.|+|+.+
T Consensus       172 ~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq  227 (370)
T KOG1007|consen  172 SFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQ  227 (370)
T ss_pred             eecccccCCCCccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCce
Confidence            356667887 4688888885 9999999999988777665 6889999999999753

>KOG2695|consensus

Probab=83.61  E-value=0.91  Score=45.57  Aligned_cols=44  Identities=11%  Similarity=0.257  Sum_probs=34.4

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcce---EEEeccCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQV---VAILKGHRK  281 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKv---V~TLkGHTk  281 (294)
                      ..|+||..-..+..+|.+.+.+|+|++||++--|+   +.+.+||..
T Consensus       299 Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN  345 (425)
T KOG2695|consen  299 SSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVN  345 (425)
T ss_pred             cchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccc
Confidence            45777665433456888888999999999998777   999999954

>PRK04792 tolB translocation protein TolB; Provisional

Probab=83.46  E-value=2  Score=42.41  Aligned_cols=53  Identities=13%  Similarity=0.074  Sum_probs=37.1

Q ss_pred             CCEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcce--EEEeccCCCcEEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGND---CQATVFNKDTEQV--VAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgKv--V~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..+.+..|+| |++.|+..+.+   ..|++||+.+++.  +..++++   ..+..|+||+++
T Consensus       218 ~~~~~p~wSP-DG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~---~~~~~wSPDG~~  275 (448)
T PRK04792        218 EPLMSPAWSP-DGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGI---NGAPRFSPDGKK  275 (448)
T ss_pred             CcccCceECC-CCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCC---cCCeeECCCCCE
Confidence            3577899999 78887765432   3688899988764  3344443   457899999863

>KOG2314|consensus

Probab=83.42  E-value=2  Score=45.36  Aligned_cols=56  Identities=11%  Similarity=0.091  Sum_probs=41.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCC-----------CcEEEEeCCCcceEEEecc--CCCcEEE-EEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGND-----------CQATVFNKDTEQVVAILKG--HRKKVTR-VVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~D-----------GTVkVWDleTgKvV~TLkG--HTkkVtS-VaFhPd~~  293 (294)
                      -++|.-++||| ..+||+|-+..           ..++|||+.+|.+.++|..  ....++- ..|+.|++
T Consensus       249 Hp~Vq~idfSP-~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdK  318 (698)
T KOG2314|consen  249 HPGVQFIDFSP-NEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDK  318 (698)
T ss_pred             CCCceeeecCC-ccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCc
Confidence            37899999999 58899987532           6789999999999888875  3333333 36776655

>KOG1334|consensus

Probab=83.18  E-value=0.7  Score=47.85  Aligned_cols=51  Identities=16%  Similarity=0.386  Sum_probs=44.3

Q ss_pred             EEEEEec-cCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        240 ILAMDIQ-VEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       240 IlSLdfS-psDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      |..+-|. | ..+|++||+.=|.|.|||..++++++-++|...-|+|+.-||.
T Consensus       396 VKgVNFfGP-rsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~  447 (559)
T KOG1334|consen  396 VKGVNFFGP-RSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPH  447 (559)
T ss_pred             cceeeeccC-ccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCC
Confidence            6667654 5 5789999999999999999999999999998889999988873

>smart00320 WD40 WD40 repeats

Probab=83.06  E-value=1.9  Score=24.01  Aligned_cols=23  Identities=35%  Similarity=0.621  Sum_probs=18.7

Q ss_pred             cceEEEeccCCCcEEEEEECCCC
Q psy12461        270 EQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       270 gKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      .+++..+..|...|+++.|++..
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~   24 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDG   24 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCC
Confidence            45677888899999999998865

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG2066|consensus

Probab=82.60  E-value=1.7  Score=47.14  Aligned_cols=42  Identities=10%  Similarity=0.196  Sum_probs=36.3

Q ss_pred             CCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        249 DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       249 DgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      +|.|++||+.||+|.|..+-+.+..+++.-+ .++.+|++||+
T Consensus        82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~df~-rpiksial~Pd  123 (846)
T KOG2066|consen   82 EGEYVASCSDDGKVVIGSLFTDDEITQYDFK-RPIKSIALHPD  123 (846)
T ss_pred             CCceEEEecCCCcEEEeeccCCccceeEecC-CcceeEEeccc
Confidence            5899999999999999999888766665544 79999999998

>KOG0280|consensus

Probab=81.69  E-value=2.8  Score=41.36  Aligned_cols=53  Identities=15%  Similarity=0.248  Sum_probs=42.3

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCC-CcceEEE-eccCCCcEEEEEECCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKD-TEQVVAI-LKGHRKKVTRVVYHPS  291 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDle-TgKvV~T-LkGHTkkVtSVaFhPd  291 (294)
                      .+-...|+..+++++.|||.|+.+.-||++ .++.+-+ -+-|+.-|.++.-+|.
T Consensus       167 E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~  221 (339)
T KOG0280|consen  167 EAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPP  221 (339)
T ss_pred             eeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCC
Confidence            345566776678999999999999999998 4555554 6789999999987774

>KOG1832|consensus

Probab=81.24  E-value=2.5  Score=47.07  Aligned_cols=59  Identities=14%  Similarity=0.177  Sum_probs=50.8

Q ss_pred             CcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       232 lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +|.. ..+-+|++|+. +.+.|+.|+-.|.|++|+..+|.-......|..+|+-|.-+.++
T Consensus      1097 frd~-~~~fTc~afs~-~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dg 1155 (1516)
T KOG1832|consen 1097 FRDE-TALFTCIAFSG-GTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDG 1155 (1516)
T ss_pred             hhcc-ccceeeEEeec-CCceEEeeeccceEEEEEccCccccccccccccccccccccCCc
Confidence            4443 36789999997 67899999999999999999999999999999999988766554

>KOG4190|consensus

Probab=80.77  E-value=1.7  Score=46.22  Aligned_cols=44  Identities=9%  Similarity=0.217  Sum_probs=36.2

Q ss_pred             CCEEEEecCCCcEEEEeCCCc-------ceEEEeccCCCcEEEEEECCCCC
Q psy12461        250 TSKILTGGNDCQATVFNKDTE-------QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       250 gnlLATGG~DGTVkVWDleTg-------KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+-+++++.|+||++|.+..+       .|-.|+..|+++|.++.|-.+.+
T Consensus       747 ENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr  797 (1034)
T KOG4190|consen  747 ENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLR  797 (1034)
T ss_pred             ccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccc
Confidence            567899999999999998642       26678999999999998876643

>KOG1409|consensus

Probab=80.75  E-value=1.8  Score=43.39  Aligned_cols=53  Identities=15%  Similarity=0.308  Sum_probs=43.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc-eEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ-VVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK-vV~TLkGHTkkVtSVaFhP  290 (294)
                      ...|.+++|.+. ..++.+|..|..+.+||+--.+ ....+.||.++|..+.+-+
T Consensus       197 ~~~~~~l~Wd~~-~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~  250 (404)
T KOG1409|consen  197 TGEVTCLKWDPG-QRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQ  250 (404)
T ss_pred             ccceEEEEEcCC-CcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhh
Confidence            567999999984 6789999999999999997554 4567899999998876543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	294
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.12
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.02
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	98.96
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	98.96
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	98.91
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	98.88
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	98.87
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	98.81
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	98.8
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	98.8
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	98.8
3ow8_A	321	WD repeat-containing protein 61; structural genomi	98.79
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	98.78
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	98.77
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	98.77
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	98.76
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	98.75
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	98.75
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	98.75
3ow8_A	321	WD repeat-containing protein 61; structural genomi	98.74
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	98.74
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	98.74
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	98.73
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	98.73
2pm7_B	297	Protein transport protein SEC13, protein transport	98.72
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	98.71
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	98.71
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	98.71
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	98.71
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	98.7
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	98.69
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	98.69
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	98.68
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	98.68
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	98.67
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	98.66
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	98.66
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	98.66
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	98.64
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	98.63
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	98.63
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	98.62
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	98.62
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	98.62
3jrp_A	379	Fusion protein of protein transport protein SEC13	98.61
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	98.6
2pm7_B	297	Protein transport protein SEC13, protein transport	98.6
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	98.59
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	98.59
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	98.58
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	98.56
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	98.56
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	98.55
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	98.54
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	98.54
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	98.54
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	98.53
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	98.53
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	98.52
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	98.52
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	98.51
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	98.51
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	98.48
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	98.47
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	98.47
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	98.47
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	98.46
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	98.44
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	98.44
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	98.44
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	98.43
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	98.43
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	98.43
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	98.42
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	98.42
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	98.42
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	98.41
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	98.41
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	98.41
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	98.4
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	98.4
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	98.4
3jrp_A	379	Fusion protein of protein transport protein SEC13	98.39
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	98.39
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	98.39
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	98.38
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	98.38
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	98.38
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	98.35
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	98.34
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	98.32
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	98.32
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	98.31
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	98.31
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	98.31
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	98.31
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	98.28
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	98.28
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	98.26
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	98.26
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	98.26
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	98.25
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	98.25
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	98.24
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	98.23
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	98.23
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	98.22
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	98.22
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	98.21
3jro_A	753	Fusion protein of protein transport protein SEC13	98.19
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	98.16
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	98.14
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	98.12
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	98.12
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	98.08
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	98.03
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	98.01
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	98.01
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	98.0
3jro_A	753	Fusion protein of protein transport protein SEC13	97.99
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	97.99
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	97.96
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	97.94
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	97.88
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	97.87
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	97.7
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	97.66
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	97.48
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	97.46
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	97.43
1k32_A	1045	Tricorn protease; protein degradation, substrate g	97.38
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	97.28
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	97.27
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	97.25
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	97.0
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	96.98
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	96.95
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	96.87
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	96.85
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	96.84
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	96.84
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	96.77
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	96.76
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	96.74
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	96.7
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	96.69
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	96.66
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	96.57
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	96.55
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	96.53
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	96.47
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	96.47
1k32_A	1045	Tricorn protease; protein degradation, substrate g	96.44
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	96.3
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	96.29
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	96.27
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	96.25
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	96.21
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	96.2
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	96.02
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	95.96
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	95.94
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	95.88
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	95.87
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	95.86
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	95.77
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	95.68
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	95.67
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	95.64
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	95.55
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	95.46
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	95.37
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	95.26
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	95.06
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	95.02
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	94.86
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	94.81
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	94.65
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	94.5
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	94.36
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	94.24
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	94.17
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	94.0
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	93.97
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	93.75
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	93.6
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	93.46
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	92.87
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	92.84
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	92.23
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	92.17
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	91.98
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	91.68
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	90.01
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	89.87
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	88.43
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	88.35
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	88.26
2qe8_A	343	Uncharacterized protein; structural genomics, join	87.68
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	87.03
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	86.99
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	86.64
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	86.62
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	86.07
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	85.63
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	84.56
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	83.88
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	82.69
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	82.47
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	82.32
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	81.97
2qe8_A	343	Uncharacterized protein; structural genomics, join	81.55
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	81.35
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	81.18
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	80.95
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	80.33
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	80.13

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.12  E-value=1.3e-10  Score=104.37  Aligned_cols=56  Identities=20%  Similarity=0.296  Sum_probs=52.5

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEE-eccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAI-LKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~T-LkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+| ++++||+|+.|++|+|||+++++++.+ +++|+.+|++|+|+||++
T Consensus       269 ~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~  325 (365)
T 4h5i_A          269 FKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST  325 (365)
T ss_dssp             CSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC
T ss_pred             CCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC
Confidence            46799999999 799999999999999999999999988 589999999999999986

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.02  E-value=8e-10  Score=93.24  Aligned_cols=57  Identities=16%  Similarity=0.177  Sum_probs=50.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc-----eEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ-----VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK-----vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+|.++++|||||.|++|+|||+.+.+     ++.+|++|...|++++|+|+++
T Consensus        38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~   99 (340)
T 4aow_A           38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ   99 (340)
T ss_dssp             SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS
T ss_pred             cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC
Confidence            56799999999557899999999999999997643     6788999999999999999875

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=98.96  E-value=1.2e-09  Score=99.04  Aligned_cols=56  Identities=18%  Similarity=0.253  Sum_probs=53.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++++|+| ++++|+||+.|++|+|||+.+++++.+|++|+..|++++|+|+++
T Consensus       108 ~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~  163 (410)
T 1vyh_C          108 RSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK  163 (410)
T ss_dssp             SSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS
T ss_pred             CCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC
Confidence            56799999999 689999999999999999999999999999999999999999875

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=98.96  E-value=1.1e-09  Score=100.40  Aligned_cols=55  Identities=20%  Similarity=0.378  Sum_probs=51.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|+||+|+| |+++||||+.|++|+|||. +++++++|++|+..|++++|+|+++
T Consensus        16 ~~~V~~~a~sp-dg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~   70 (577)
T 2ymu_A           16 SSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQ   70 (577)
T ss_dssp             SSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSS
T ss_pred             CCcEEEEEECC-CCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCC
Confidence            56799999999 7999999999999999995 7889999999999999999999976

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=98.91  E-value=3.8e-09  Score=95.05  Aligned_cols=56  Identities=16%  Similarity=0.239  Sum_probs=53.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+| ++++|+||+.|++|+|||+++++++.+|.+|+..|++++|+|++.
T Consensus       127 ~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~  182 (344)
T 4gqb_B          127 DDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD  182 (344)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT
T ss_pred             CCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC
Confidence            56799999999 799999999999999999999999999999999999999999874

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=98.88  E-value=4.9e-09  Score=93.29  Aligned_cols=56  Identities=16%  Similarity=0.255  Sum_probs=52.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCc-EEEEeCCCcceEEEec-c-CCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQ-ATVFNKDTEQVVAILK-G-HRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGT-VkVWDleTgKvV~TLk-G-HTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++||||+.|++ |+|||+++++++.+|. | |...|++++|+|+++
T Consensus       195 ~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~  253 (355)
T 3vu4_A          195 TNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGS  253 (355)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSC
T ss_pred             CCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCC
Confidence            56799999999 7999999999999 9999999999999998 6 999999999999875

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=98.87  E-value=5.7e-09  Score=91.44  Aligned_cols=56  Identities=13%  Similarity=0.196  Sum_probs=52.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++.+++||+.|++|+|||+++++++.+|.+|...|++++|+|+++
T Consensus        76 ~~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~  131 (343)
T 2xzm_R           76 NHFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNR  131 (343)
T ss_dssp             SSCEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTT
T ss_pred             CCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCC
Confidence            45799999998 689999999999999999999999999999999999999999875

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=98.81  E-value=1.1e-08  Score=86.35  Aligned_cols=55  Identities=9%  Similarity=0.170  Sum_probs=52.3

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .|.+++|+| ++++|++|+.|++|+|||+.+++++.++.+|..+|++++|+|++++
T Consensus       275 ~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~  329 (368)
T 3mmy_A          275 AVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNI  329 (368)
T ss_dssp             CEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSC
T ss_pred             ceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCe
Confidence            699999999 7899999999999999999999999999999999999999999863

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=98.80  E-value=1.4e-08  Score=85.65  Aligned_cols=56  Identities=11%  Similarity=0.128  Sum_probs=52.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++++|+| ++++|++|+.|++|+|||+.+++.+.++.+|...|++++|+|+++
T Consensus        32 ~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~   87 (369)
T 3zwl_B           32 ERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTK   87 (369)
T ss_dssp             SSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred             eceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCC
Confidence            46799999999 799999999999999999999999999999999999999999865

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=98.80  E-value=4.3e-08  Score=86.01  Aligned_cols=56  Identities=21%  Similarity=0.272  Sum_probs=53.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|+||+.|++|+|||+.+++.+.++..|...|.+++|+|+++
T Consensus        55 ~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~  110 (340)
T 1got_B           55 LAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN  110 (340)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSS
T ss_pred             CCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCC
Confidence            56799999998 799999999999999999999999999999999999999999875

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=98.80  E-value=1.3e-08  Score=88.79  Aligned_cols=56  Identities=14%  Similarity=0.141  Sum_probs=52.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|+||+.|++|+|||+.+++++.+|.+|...|++++|+|+++
T Consensus        65 ~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~  120 (319)
T 3frx_A           65 SHIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS  120 (319)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSC
T ss_pred             cccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCC
Confidence            45799999998 799999999999999999999999999999999999999999865

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=98.79  E-value=1.5e-08  Score=89.16  Aligned_cols=56  Identities=18%  Similarity=0.259  Sum_probs=52.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++.+|+||+.|++|+|||+.+++++.+|.+|...|++++|+|+++
T Consensus       248 ~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~  303 (321)
T 3ow8_A          248 ASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGS  303 (321)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred             CCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence            56799999999 689999999999999999999999999999999999999999875

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=98.78  E-value=1.3e-08  Score=90.96  Aligned_cols=55  Identities=24%  Similarity=0.385  Sum_probs=48.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC-CC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP-SE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP-d~  292 (294)
                      ...|++|+|+|.+..+||||+.|++|+|||+++++++..+ +|+..|++|+|+| ++
T Consensus       269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~  324 (357)
T 4g56_B          269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDH  324 (357)
T ss_dssp             SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSST
T ss_pred             ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCC
Confidence            5679999999954578999999999999999999988765 8999999999999 44

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=98.77  E-value=7.6e-09  Score=92.42  Aligned_cols=56  Identities=20%  Similarity=0.236  Sum_probs=53.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++++|+| ++++|+||+.|++|+|||+.+++.+.++++|...|++++|+|+++
T Consensus        66 ~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~  121 (380)
T 3iz6_a           66 SGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQ  121 (380)
T ss_dssp             SSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSS
T ss_pred             ccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCC
Confidence            56799999999 799999999999999999999999999999999999999999875

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=98.77  E-value=2.5e-08  Score=87.44  Aligned_cols=57  Identities=18%  Similarity=0.324  Sum_probs=53.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..+|.+++|+| ++.+|++|+.|++|+|||+.+++.+.+|.+|..+|++++|+|++++
T Consensus       270 ~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~  326 (340)
T 1got_B          270 ICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA  326 (340)
T ss_dssp             CSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSC
T ss_pred             ccceEEEEECC-CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCE
Confidence            45799999999 7999999999999999999999999999999999999999999753

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=98.76  E-value=2.2e-08  Score=82.82  Aligned_cols=54  Identities=11%  Similarity=0.169  Sum_probs=49.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc----ceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE----QVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg----KvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|++++|+| ++++||+|+.|++|+|||+.++    +++.++.+|...|++++|+|.
T Consensus        11 ~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~   68 (351)
T 3f3f_A           11 DDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP   68 (351)
T ss_dssp             SSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCG
T ss_pred             ccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCC
Confidence            56799999999 7999999999999999999976    578899999999999999993

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=98.75  E-value=2.9e-08  Score=84.58  Aligned_cols=56  Identities=7%  Similarity=0.187  Sum_probs=53.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++++|+| ++++|++|+.|++|+|||+.+++.+.++.+|...|++++|+|+++
T Consensus        23 ~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~   78 (312)
T 4ery_A           23 TKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN   78 (312)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred             CCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCC
Confidence            56799999999 799999999999999999999999999999999999999999875

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=98.75  E-value=1.3e-08  Score=87.94  Aligned_cols=56  Identities=13%  Similarity=0.103  Sum_probs=52.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+|+|+| ++.+|+||+.|++|+|||+++++.+.++.+|..+|++++|+|+++
T Consensus        13 ~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~   68 (304)
T 2ynn_A           13 SDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN   68 (304)
T ss_dssp             CSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT
T ss_pred             CCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCC
Confidence            45799999999 799999999999999999999999999999999999999999865

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=98.75  E-value=1.9e-08  Score=86.97  Aligned_cols=56  Identities=21%  Similarity=0.331  Sum_probs=52.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+.+++++.+|++|...|++++|+|+++
T Consensus        55 ~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  110 (304)
T 2ynn_A           55 ETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP  110 (304)
T ss_dssp             SSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred             CCcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCC
Confidence            45799999998 699999999999999999999999999999999999999999875

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=98.74  E-value=2e-08  Score=88.35  Aligned_cols=56  Identities=18%  Similarity=0.357  Sum_probs=52.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++.+|+||+.|++|+|||+++++++.+|.+|...|++++|+|+++
T Consensus       206 ~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~  261 (321)
T 3ow8_A          206 AMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT  261 (321)
T ss_dssp             SSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred             CCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCC
Confidence            45799999999 799999999999999999999999999999999999999999875

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=98.74  E-value=2.6e-08  Score=87.83  Aligned_cols=56  Identities=18%  Similarity=0.315  Sum_probs=51.4

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc--ceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE--QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg--KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+|+|+| ++++||+|+.|++|+|||+.++  +++.+|++|...|++++|+|+++
T Consensus        61 ~~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~  118 (345)
T 3fm0_A           61 QRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN  118 (345)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS
T ss_pred             CCcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC
Confidence            56799999999 7999999999999999999876  57889999999999999999875

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=98.74  E-value=3.1e-08  Score=88.46  Aligned_cols=56  Identities=18%  Similarity=0.303  Sum_probs=52.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+| ++++|+||+.|++|+|||+++++++..|++|+..|++|+|+|+++
T Consensus       139 ~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~  194 (357)
T 4g56_B          139 DDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKD  194 (357)
T ss_dssp             SSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCS
T ss_pred             CCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence            45799999999 799999999999999999999999999999999999999999864

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=98.73  E-value=1.7e-08  Score=91.54  Aligned_cols=55  Identities=11%  Similarity=0.140  Sum_probs=48.5

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|+||+|+|.++++||+|+.||+|+|||+.+++  .+.++.||+..|++|+|+|.
T Consensus       119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~  175 (435)
T 4e54_B          119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL  175 (435)
T ss_dssp             SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS
T ss_pred             CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC
Confidence            45799999999778899999999999999998765  45567899999999999984

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=98.73  E-value=2.4e-08  Score=91.49  Aligned_cols=56  Identities=20%  Similarity=0.371  Sum_probs=51.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|++|+|+| ++++||||+.|++|+|||+ +++++.+|.+|+..|++|+|+||+++
T Consensus       508 ~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~  563 (577)
T 2ymu_A          508 SSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQT  563 (577)
T ss_dssp             SSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSC
T ss_pred             CCCEEEEEEcC-CCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCE
Confidence            46799999999 7999999999999999996 78899999999999999999999864

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=98.72  E-value=3.3e-08  Score=85.10  Aligned_cols=54  Identities=19%  Similarity=0.233  Sum_probs=49.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC--cceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT--EQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT--gKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|.+++|+| ++++||||+.|++|+|||+.+  .+++.+|++|+.+|++|+|+|+
T Consensus         9 ~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~   64 (297)
T 2pm7_B            9 NEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP   64 (297)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCG
T ss_pred             cCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCC
Confidence            56799999998 799999999999999999974  4788999999999999999763

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=98.71  E-value=2.2e-08  Score=90.85  Aligned_cols=56  Identities=11%  Similarity=0.211  Sum_probs=52.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|+||+.|++|+|||+.+++++.++.+|...|++++|+|+++
T Consensus       150 ~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~  205 (410)
T 1vyh_C          150 TDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD  205 (410)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSS
T ss_pred             CCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCC
Confidence            45799999998 689999999999999999999999999999999999999999875

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=98.71  E-value=2.7e-08  Score=89.50  Aligned_cols=56  Identities=13%  Similarity=0.194  Sum_probs=50.2

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+++++|+|.++.+|++|+.|++|+|||+++++++.+|++|...|++|+|+|++.
T Consensus       215 ~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~  270 (344)
T 4gqb_B          215 YLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSV  270 (344)
T ss_dssp             CCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSS
T ss_pred             ccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence            45899999986678999999999999999999999999999999999999999874

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=98.71  E-value=4.4e-08  Score=83.44  Aligned_cols=56  Identities=18%  Similarity=0.329  Sum_probs=52.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+|.+++|+| ++++|++|+.|++|+|||+++++++.++++|...|+++.|+|+++
T Consensus        65 ~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  120 (312)
T 4ery_A           65 KLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN  120 (312)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred             CCceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence            45799999999 799999999999999999999999999999999999999999864

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=98.71  E-value=2.8e-08  Score=87.06  Aligned_cols=56  Identities=18%  Similarity=0.239  Sum_probs=52.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+++++.+.+|++|...|++++|+|+++
T Consensus       139 ~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  194 (420)
T 3vl1_A          139 VSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGR  194 (420)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTT
T ss_pred             cCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCC
Confidence            46799999999 689999999999999999999999999999999999999999875

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=98.70  E-value=3.4e-08  Score=88.63  Aligned_cols=54  Identities=24%  Similarity=0.396  Sum_probs=51.5

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .|.+++|+| ++++||+|+.|++|+|||+.+++++.++++|...|++++|+|+++
T Consensus       125 ~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~  178 (393)
T 1erj_A          125 YIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD  178 (393)
T ss_dssp             BEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred             eEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC
Confidence            499999999 799999999999999999999999999999999999999999875

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.69  E-value=4.2e-08  Score=85.94  Aligned_cols=56  Identities=21%  Similarity=0.386  Sum_probs=45.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-------cceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-------EQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-------gKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+|+|+| ++++||||+.|++|+|||+.+       .+++.+|++|+..|++|+|+|+++
T Consensus        58 ~~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~  120 (330)
T 2hes_X           58 KKAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY  120 (330)
T ss_dssp             CSCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC
T ss_pred             cCCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC
Confidence            56799999999 699999999999999999953       467889999999999999999875

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=98.69  E-value=5e-08  Score=86.76  Aligned_cols=57  Identities=23%  Similarity=0.363  Sum_probs=53.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..++.+++|+| ++.+|++|+.|++|+|||+.+++.+.+|.+|..+|++++|+|++++
T Consensus       284 ~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~  340 (354)
T 2pbi_B          284 IFGASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTA  340 (354)
T ss_dssp             CSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSC
T ss_pred             ccceeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCE
Confidence            34799999999 6999999999999999999999999999999999999999999863

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.68  E-value=4.6e-08  Score=85.67  Aligned_cols=56  Identities=21%  Similarity=0.361  Sum_probs=49.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC----cceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT----EQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT----gKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+|+|+| ++++||||+.|++|+|||+.+    .+++.+|++|...|++++|+|+++
T Consensus       107 ~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~  166 (330)
T 2hes_X          107 ENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA  166 (330)
T ss_dssp             --CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred             CCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence            45799999999 699999999999999999943    257889999999999999999875

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=98.68  E-value=2.8e-08  Score=86.78  Aligned_cols=55  Identities=11%  Similarity=0.061  Sum_probs=51.3

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceE-EEecc-CCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVV-AILKG-HRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV-~TLkG-HTkkVtSVaFhPd~~  293 (294)
                      ..|.+++|+| ++.+|++|+.|++|+|||+++++.+ .+|++ |..+|++++|+|++.
T Consensus       171 ~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~  227 (343)
T 3lrv_A          171 VEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY  227 (343)
T ss_dssp             CCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS
T ss_pred             CceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC
Confidence            4699999999 7999999999999999999999988 89998 999999999999875

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=98.67  E-value=5.9e-08  Score=81.04  Aligned_cols=57  Identities=19%  Similarity=0.247  Sum_probs=49.3

Q ss_pred             CCCEEEEEeccCCCCEEEE--ecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILT--GGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLAT--GG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...+.++.|++ +++.+++  |+.|++|+|||+++++++.+|+||+.+|++++|+|++++
T Consensus       240 ~~~v~~~~~~~-~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~  298 (318)
T 4ggc_A          240 HSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGAT  298 (318)
T ss_dssp             SSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred             eeeeeeeeecc-cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence            45799999998 4665554  458999999999999999999999999999999999763

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=98.66  E-value=3.3e-08  Score=86.12  Aligned_cols=53  Identities=19%  Similarity=0.268  Sum_probs=47.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhP  290 (294)
                      ...|++++|+| ++++||||+.|++|+|||+.+++  ++.+|++|+.+|++|+|+|
T Consensus        13 ~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~   67 (316)
T 3bg1_A           13 EDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH   67 (316)
T ss_dssp             -CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECC
T ss_pred             cCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCC
Confidence            56799999998 79999999999999999998764  6789999999999999975

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=98.66  E-value=6.3e-08  Score=81.71  Aligned_cols=58  Identities=10%  Similarity=0.107  Sum_probs=50.8

Q ss_pred             CCCCEEEEEeccCC--CCEEEEecCCCcEEEEeCCC-cceE-EEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVED--TSKILTGGNDCQATVFNKDT-EQVV-AILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsD--gnlLATGG~DGTVkVWDleT-gKvV-~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +...|++|+|+|..  +++|++|+.|++|+|||+.+ ++.+ ..+.+|...|++++|+|+++
T Consensus        38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   99 (368)
T 3mmy_A           38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGS   99 (368)
T ss_dssp             CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred             CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCC
Confidence            35689999999932  58999999999999999997 5555 88999999999999999875

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=98.66  E-value=6.1e-08  Score=80.09  Aligned_cols=57  Identities=16%  Similarity=0.175  Sum_probs=51.1

Q ss_pred             CCCEEEEEeccCCC----CEEEEecCCCcEEEEeCCCc------------------------------------------
Q psy12461        237 VPGILAMDIQVEDT----SKILTGGNDCQATVFNKDTE------------------------------------------  270 (294)
Q Consensus       237 ~pGIlSLdfSpsDg----nlLATGG~DGTVkVWDleTg------------------------------------------  270 (294)
                      ...|.+++|+| ++    ++|+||+.|++|+|||++++                                          
T Consensus       214 ~~~i~~~~~~p-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (351)
T 3f3f_A          214 KSLIRSISWAP-SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQS  292 (351)
T ss_dssp             CSCEEEEEECC-CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CC
T ss_pred             CcceeEEEECC-CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecc
Confidence            56799999999 55    79999999999999999875                                          


Q ss_pred             ----ceEEEeccCCCcEEEEEECCCCCC
Q psy12461        271 ----QVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       271 ----KvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                          +.+.++.+|...|++++|+|++++
T Consensus       293 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~  320 (351)
T 3f3f_A          293 NLQVELLSEHDDHNGEVWSVSWNLTGTI  320 (351)
T ss_dssp             SEEEEEEEEECTTSSCEEEEEECSSSCC
T ss_pred             cccccEEEEEecccccEEEEEEcCCCCE
Confidence                788899999999999999998763

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=98.64  E-value=3.3e-08  Score=84.38  Aligned_cols=57  Identities=25%  Similarity=0.289  Sum_probs=52.7

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +...|.+++|+| ++++|++|+.|++|+|||+.+++  .+.++.+|...|++++|+|+++
T Consensus         7 ~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~   65 (372)
T 1k8k_C            7 LVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN   65 (372)
T ss_dssp             CSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTT
T ss_pred             cCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCC
Confidence            356799999999 79999999999999999999987  8999999999999999999875

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=98.63  E-value=2.3e-08  Score=90.21  Aligned_cols=57  Identities=18%  Similarity=0.174  Sum_probs=51.1

Q ss_pred             CCCCEEEEEecc-------CCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQV-------EDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSp-------sDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      |...|++|+|+|       .|+.+|||||.|++|+|||+.+++.+.++.+|..+|.+|+|+|++
T Consensus       135 H~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~  198 (393)
T 4gq1_A          135 HHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSN  198 (393)
T ss_dssp             CSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTE
T ss_pred             CCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCC
Confidence            356799999986       257899999999999999999998888899999999999999975

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=98.63  E-value=7.7e-08  Score=92.68  Aligned_cols=58  Identities=17%  Similarity=0.178  Sum_probs=54.0

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +...|.+++|+| ++++|+||+.|++|+|||+.+++++.+|.+|+..|++++|+|++++
T Consensus       429 h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~  486 (694)
T 3dm0_A          429 HSHFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQ  486 (694)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSC
T ss_pred             CCCcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCE
Confidence            356799999998 7999999999999999999999999999999999999999998763

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=98.62  E-value=6.1e-08  Score=84.53  Aligned_cols=57  Identities=12%  Similarity=0.123  Sum_probs=50.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-----cceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-----EQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-----gKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+|.++++|+|||.|++|+|||+.+     +..+.+|++|+..|++++|+|+++
T Consensus        17 ~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~   78 (319)
T 3frx_A           17 NGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA   78 (319)
T ss_dssp             SSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS
T ss_pred             cceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC
Confidence            567999999985568999999999999999864     346889999999999999999875

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=98.62  E-value=9.3e-09  Score=89.11  Aligned_cols=57  Identities=16%  Similarity=0.209  Sum_probs=52.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc--ceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE--QVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg--KvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|++++|+| ++++||+|+.|++|+|||+.++  +++.+|.+|...|++++|+|++++
T Consensus        11 ~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~   69 (377)
T 3dwl_C           11 PKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNR   69 (377)
T ss_dssp             SSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCC
T ss_pred             CCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCE
Confidence            45799999999 7999999999999999999998  889999999999999999998753

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=98.62  E-value=1.2e-07  Score=83.61  Aligned_cols=56  Identities=25%  Similarity=0.371  Sum_probs=50.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc---ceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE---QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg---KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|+||+.|++|+|||+.++   +++..+.+|...|++++|+|+++
T Consensus       105 ~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  163 (345)
T 3fm0_A          105 ENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE  163 (345)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred             CCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence            45799999999 7999999999999999999875   46788999999999999999875

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=98.61  E-value=6.9e-08  Score=82.09  Aligned_cols=54  Identities=20%  Similarity=0.253  Sum_probs=50.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCC--CcceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKD--TEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle--TgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|++++|+| ++++||+|+.|++|+|||+.  +.+++.++.+|...|++++|+|+
T Consensus        11 ~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~   66 (379)
T 3jrp_A           11 NELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP   66 (379)
T ss_dssp             CCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred             cccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCC
Confidence            56799999999 79999999999999999998  67889999999999999999876

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=98.60  E-value=8.4e-08  Score=85.30  Aligned_cols=56  Identities=21%  Similarity=0.219  Sum_probs=52.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|+|++|+| ++.+|+|||.|++|+|||..+++...++..|...|.+++|+|++.
T Consensus        64 ~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~  119 (354)
T 2pbi_B           64 GNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGC  119 (354)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSS
T ss_pred             CCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCC
Confidence            56799999999 789999999999999999999999999999999999999999875

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=98.60  E-value=1.2e-07  Score=81.58  Aligned_cols=56  Identities=21%  Similarity=0.432  Sum_probs=49.0

Q ss_pred             CCCEEEEEeccC------------CCCEEEEecCCCcEEEEeCCCcc----eEEEeccCCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVE------------DTSKILTGGNDCQATVFNKDTEQ----VVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSps------------DgnlLATGG~DGTVkVWDleTgK----vV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ...|.+++|+|.            ++.+||||+.|++|+|||+++++    ++.+|++|+..|++|+|+|++
T Consensus       145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~  216 (297)
T 2pm7_B          145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV  216 (297)
T ss_dssp             SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred             cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC
Confidence            457999999983            14699999999999999998766    778999999999999999984

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=98.59  E-value=1.6e-07  Score=79.41  Aligned_cols=57  Identities=25%  Similarity=0.348  Sum_probs=52.5

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe---ccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL---KGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL---kGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+|.++++|++|+.|++|+|||+++++.+..+   .+|...|++++|+|+++
T Consensus       115 ~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  174 (366)
T 3k26_A          115 GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE  174 (366)
T ss_dssp             CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSS
T ss_pred             CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCC
Confidence            4679999999856899999999999999999999999998   79999999999999875

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=98.59  E-value=1.1e-07  Score=90.89  Aligned_cols=56  Identities=14%  Similarity=0.222  Sum_probs=52.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-------cCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-------GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-------GHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++||||+.|++|+|||+.+++++.+|.       +|...|++|+|+|+++
T Consensus       190 ~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~  252 (611)
T 1nr0_A          190 TKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT  252 (611)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred             cCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC
Confidence            56799999999 79999999999999999999999999985       8999999999999875

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=98.58  E-value=1.2e-07  Score=84.01  Aligned_cols=56  Identities=27%  Similarity=0.499  Sum_probs=51.5

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-------ceEEEeccCCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-------QVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-------KvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ...|++++|+|.++++|++|+.|++|+|||+.++       +.+.++.+|...|++++|+|++
T Consensus        81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  143 (402)
T 2aq5_A           81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTA  143 (402)
T ss_dssp             SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSB
T ss_pred             CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCC
Confidence            4579999999855889999999999999999988       6789999999999999999986

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=98.56  E-value=1.2e-07  Score=84.64  Aligned_cols=58  Identities=17%  Similarity=0.403  Sum_probs=52.3

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCC-CcceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKD-TEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle-TgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +...|.+++|++.++++|+||+.|++|+|||++ +++++.++.+|...|++|+|+|+++
T Consensus       204 h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~  262 (380)
T 3iz6_a          204 HTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ  262 (380)
T ss_dssp             CCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS
T ss_pred             CccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC
Confidence            356799999987678999999999999999998 5688999999999999999999875

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=98.56  E-value=1.6e-07  Score=79.46  Aligned_cols=56  Identities=16%  Similarity=0.233  Sum_probs=51.0

Q ss_pred             CCCEEEEEeccCC----CCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC-CCC
Q psy12461        237 VPGILAMDIQVED----TSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP-SEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsD----gnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP-d~~  293 (294)
                      ...|.+++|+| +    +.+|++|+.|++|+|||+.+++++.++.+|...|++++|+| +++
T Consensus        69 ~~~v~~~~~~~-~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  129 (366)
T 3k26_A           69 DENFYTCAWTY-DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPN  129 (366)
T ss_dssp             TCCEEEEEEEE-CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTT
T ss_pred             CCcEEEEEecc-CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCC
Confidence            45799999998 5    56999999999999999999999999999999999999999 543

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=98.55  E-value=1.2e-07  Score=82.46  Aligned_cols=57  Identities=18%  Similarity=0.351  Sum_probs=53.3

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +...|.+++|+|.++++|++|+.|++|+|||+++++++.++.+|...|++++|+|++
T Consensus       261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~  317 (416)
T 2pm9_A          261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEA  317 (416)
T ss_dssp             CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTC
T ss_pred             ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCC
Confidence            356799999998568999999999999999999999999999999999999999987

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=98.54  E-value=2e-07  Score=83.82  Aligned_cols=54  Identities=7%  Similarity=0.167  Sum_probs=50.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|+||+|+| ++++||+|+.|++|+|||+++++++.++.+|+..|.++.|++.
T Consensus       147 ~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~  200 (420)
T 4gga_A          147 GEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSY  200 (420)
T ss_dssp             TCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred             CCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCC
Confidence            45699999999 7999999999999999999999999999999999999999763

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=98.54  E-value=2.1e-07  Score=81.47  Aligned_cols=57  Identities=14%  Similarity=0.204  Sum_probs=49.8

Q ss_pred             CCCEEEEEe-----ccCCCCEEEEecCCCcEEEEeCCC-------cceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDI-----QVEDTSKILTGGNDCQATVFNKDT-------EQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdf-----SpsDgnlLATGG~DGTVkVWDleT-------gKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|     ++.++.+|+||+.|++|+|||+.+       ++...+|.+|+..|++++|+|++.
T Consensus        21 ~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~   89 (343)
T 2xzm_R           21 SDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC   89 (343)
T ss_dssp             SSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred             hhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence            567999999     654688999999999999999975       356788999999999999999875

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=98.54  E-value=1.5e-07  Score=78.14  Aligned_cols=55  Identities=16%  Similarity=0.213  Sum_probs=51.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++| + ++++|++|+.|++|+|||+.+++.+..+.+|...|++++|+|+++
T Consensus        18 ~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~   72 (313)
T 3odt_A           18 DQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKE   72 (313)
T ss_dssp             SSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTT
T ss_pred             CCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCC
Confidence            567999999 6 688999999999999999999999999999999999999999875

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=98.53  E-value=1.4e-07  Score=81.76  Aligned_cols=56  Identities=21%  Similarity=0.254  Sum_probs=46.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc---eEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ---VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK---vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+.+++   .+..+.+|...|++++|+|+++
T Consensus        55 ~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  113 (377)
T 3dwl_C           55 DKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNED  113 (377)
T ss_dssp             SSCEEEEEECT-TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSS
T ss_pred             CceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCC
Confidence            56799999999 68999999999999999999987   7888999999999999999875

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=98.53  E-value=2.2e-07  Score=88.85  Aligned_cols=56  Identities=20%  Similarity=0.370  Sum_probs=51.7

Q ss_pred             CCCEEEEEeccCCCC-EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++++|+| ++. +|+||+.|++|+|||..+++++.+|.+|+..|++|+|+|+++
T Consensus       147 ~~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~  203 (611)
T 1nr0_A          147 ARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS  203 (611)
T ss_dssp             SSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS
T ss_pred             CCCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC
Confidence            56799999999 454 699999999999999999999999999999999999999975

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=98.52  E-value=3e-07  Score=81.53  Aligned_cols=58  Identities=16%  Similarity=0.152  Sum_probs=52.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe--ccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL--KGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL--kGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|.+++|+|...++|++|+.|++|+|||+++++++.++  .+|...|++++|+|++++
T Consensus       131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  190 (402)
T 2aq5_A          131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL  190 (402)
T ss_dssp             SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC
T ss_pred             CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE
Confidence            4579999999942379999999999999999999999999  899999999999998753

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=98.52  E-value=3.1e-07  Score=76.65  Aligned_cols=53  Identities=8%  Similarity=0.182  Sum_probs=49.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ...|++|+|+| ++++||||+.|++|+|||+++++++.++++|+..+.++.+.+
T Consensus        67 ~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~  119 (318)
T 4ggc_A           67 GEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS  119 (318)
T ss_dssp             TCCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET
T ss_pred             CCeEEEEEECC-CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCC
Confidence            45699999999 799999999999999999999999999999999999888765

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=98.51  E-value=1.6e-07  Score=82.75  Aligned_cols=54  Identities=17%  Similarity=0.406  Sum_probs=48.8

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc-----------eEEEeccCC------------CcEEEEEECCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ-----------VVAILKGHR------------KKVTRVVYHPSE  292 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK-----------vV~TLkGHT------------kkVtSVaFhPd~  292 (294)
                      ..|.+|+|+| ++++||+|+.|++|+|||+.+++           ++.+|++|.            .+|++++|+|++
T Consensus        29 ~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           29 DIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             GSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             CcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            5799999999 79999999999999999999887           688999998            899999999986

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=98.51  E-value=2.4e-07  Score=83.34  Aligned_cols=56  Identities=20%  Similarity=0.264  Sum_probs=49.1

Q ss_pred             CCEEEEEeccCCCCEEEEe--cCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTG--GNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATG--G~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..+.++.|++ +++.++++  ..|++|+|||+.+++++.+|+||+.+|++|+|+|++++
T Consensus       321 ~~v~~~~~~~-~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~  378 (420)
T 4gga_A          321 SQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGAT  378 (420)
T ss_dssp             SCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred             cceeeeeecC-CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence            5799999998 56666654  47999999999999999999999999999999999863

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=98.48  E-value=2.8e-07  Score=80.19  Aligned_cols=55  Identities=11%  Similarity=0.154  Sum_probs=48.9

Q ss_pred             CCCEEEEEecc-CCCCEEEEecCCCcEEEEeCCCc--ceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQV-EDTSKILTGGNDCQATVFNKDTE--QVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSp-sDgnlLATGG~DGTVkVWDleTg--KvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|.+|+|++ .++++|+||+.|++|+|||++++  +.+.++.+|+..|++|+|+|+
T Consensus        57 ~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~  114 (316)
T 3bg1_A           57 EGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH  114 (316)
T ss_dssp             SSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCT
T ss_pred             CccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCC
Confidence            56799999975 24789999999999999999987  467889999999999999997

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=98.47  E-value=4.6e-07  Score=75.69  Aligned_cols=56  Identities=16%  Similarity=0.272  Sum_probs=52.4

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|+.|++||+++++.+.++++|...|++++|+|+++
T Consensus       141 ~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  196 (337)
T 1gxr_A          141 APACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGT  196 (337)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred             CCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCC
Confidence            45799999998 689999999999999999999999999999999999999999874

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=98.47  E-value=2.6e-07  Score=86.18  Aligned_cols=58  Identities=17%  Similarity=0.071  Sum_probs=52.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|.+|+|+|.++++||+|+.|++|+|||+++++.+....+|...|++++|+|++++
T Consensus       149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~  206 (434)
T 2oit_A          149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQ  206 (434)
T ss_dssp             GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSC
T ss_pred             CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCE
Confidence            3469999999955889999999999999999999888888899999999999999764

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=98.47  E-value=4e-07  Score=81.17  Aligned_cols=56  Identities=16%  Similarity=0.270  Sum_probs=52.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+++++.+.++.+|...|++++|+|++.
T Consensus       217 ~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~  272 (401)
T 4aez_A          217 SSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQS  272 (401)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTST
T ss_pred             CCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCC
Confidence            56799999999 799999999999999999999999999999999999999999764

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=98.46  E-value=4.8e-07  Score=75.07  Aligned_cols=55  Identities=9%  Similarity=0.135  Sum_probs=50.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++ .|++|+.|+.|+|||+.+++++.++..|...|++++|+|+++
T Consensus       225 ~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~  279 (313)
T 3odt_A          225 ESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD  279 (313)
T ss_dssp             SSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred             CceEEEEEEec-CC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC
Confidence            46799999998 45 689999999999999999999999999999999999999874

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=98.44  E-value=4.1e-07  Score=92.11  Aligned_cols=57  Identities=18%  Similarity=0.274  Sum_probs=53.7

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +...|++++|+| ++++||||+.|++|+|||+.+++.+.++++|...|++++|+|+++
T Consensus       614 h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~  670 (1249)
T 3sfz_A          614 HTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDS  670 (1249)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred             ccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCC
Confidence            356799999999 799999999999999999999999999999999999999999875

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=98.44  E-value=3.9e-07  Score=77.06  Aligned_cols=58  Identities=7%  Similarity=0.123  Sum_probs=50.8

Q ss_pred             CCCCEEEEEeccCCCC-EEEEecCCCcEEEEeCCCc-------------------ceEEEeccCCCcEEEEEECCCCCC
Q psy12461        236 SVPGILAMDIQVEDTS-KILTGGNDCQATVFNKDTE-------------------QVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       236 s~pGIlSLdfSpsDgn-lLATGG~DGTVkVWDleTg-------------------KvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +...|.+++|+| ++. +|++|+.|+.|+|||++++                   +++.++.+|..+|++++|+|++++
T Consensus       258 ~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  335 (357)
T 3i2n_A          258 HKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRG  335 (357)
T ss_dssp             CSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTT
T ss_pred             CcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCe
Confidence            356799999999 566 8999999999999999754                   478899999999999999999863

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=98.44  E-value=6.1e-07  Score=75.68  Aligned_cols=55  Identities=25%  Similarity=0.329  Sum_probs=51.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++++.|++|+|||+.+++++.++. |...|++++|+|+++
T Consensus        74 ~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~  128 (369)
T 3zwl_B           74 TGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGN  128 (369)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSS
T ss_pred             CCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCC
Confidence            45799999998 78999999999999999999999999998 889999999999875

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=98.43  E-value=3.8e-07  Score=77.82  Aligned_cols=56  Identities=13%  Similarity=0.125  Sum_probs=52.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+++++++.++.+|..+|++++|+|+++
T Consensus       202 ~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~  257 (372)
T 1k8k_C          202 CGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS  257 (372)
T ss_dssp             SSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTE
T ss_pred             CCeEEEEEECC-CCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCC
Confidence            45799999998 689999999999999999999999999999999999999999864

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=98.43  E-value=3.2e-07  Score=82.30  Aligned_cols=55  Identities=5%  Similarity=-0.037  Sum_probs=48.1

Q ss_pred             CCCEEEEEeccCCCCEEE--EecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKIL--TGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLA--TGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...+.+++|+| |++++|  ||+.|++|+|||+.+++++.+++ |...|++|+|+|+++
T Consensus       133 ~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~  189 (365)
T 4h5i_A          133 DDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGK  189 (365)
T ss_dssp             TCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSS
T ss_pred             ccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCc
Confidence            34689999999 788865  66689999999999999999987 778899999999986

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=98.43  E-value=2.7e-07  Score=88.19  Aligned_cols=56  Identities=13%  Similarity=0.111  Sum_probs=52.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++||+|+.|++|+|||+.+++.+.++.+|..+|++++|+|+++
T Consensus        13 ~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~   68 (814)
T 3mkq_A           13 SDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKN   68 (814)
T ss_dssp             CSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT
T ss_pred             CCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCC
Confidence            45799999999 799999999999999999999999999999999999999999875

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=98.42  E-value=5.9e-07  Score=77.84  Aligned_cols=55  Identities=11%  Similarity=0.181  Sum_probs=51.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec------cC---------------CCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK------GH---------------RKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk------GH---------------TkkVtSVaFhPd~  292 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+.+++++.+++      +|               ...|++++|+|++
T Consensus       291 ~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g  366 (397)
T 1sq9_A          291 SSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG  366 (397)
T ss_dssp             SSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred             CCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence            45799999999 68999999999999999999999999999      88               9999999999986

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=98.42  E-value=4.9e-07  Score=79.61  Aligned_cols=56  Identities=7%  Similarity=0.151  Sum_probs=49.6

Q ss_pred             CCCEEEEEeccCCC-CEEEEecCCCcEEEEeCCCcce----EEEeccCCC------------cEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDT-SKILTGGNDCQATVFNKDTEQV----VAILKGHRK------------KVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDg-nlLATGG~DGTVkVWDleTgKv----V~TLkGHTk------------kVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++ ++|++|+.|++|+|||+++++.    +.++++|..            .|++++|+|+++
T Consensus       226 ~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~  298 (447)
T 3dw8_B          226 TEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR  298 (447)
T ss_dssp             CCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS
T ss_pred             CcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC
Confidence            56799999999 56 8999999999999999999987    899999987            999999999875

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=98.42  E-value=4.7e-07  Score=82.63  Aligned_cols=57  Identities=14%  Similarity=0.322  Sum_probs=52.1

Q ss_pred             CCCCEEEEEeccC---------CCCEEEEecCCCcEEEEeCCCc-ceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVE---------DTSKILTGGNDCQATVFNKDTE-QVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSps---------DgnlLATGG~DGTVkVWDleTg-KvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +...|++++|+|.         ++.+||+|+.|++|+|||+.++ +++.++.+|...|++++|+|++
T Consensus       530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~  596 (615)
T 1pgu_A          530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS  596 (615)
T ss_dssp             CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT
T ss_pred             CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCC
Confidence            3567999999982         4899999999999999999998 8999999999999999999986

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=98.41  E-value=6.8e-07  Score=76.89  Aligned_cols=55  Identities=18%  Similarity=0.314  Sum_probs=50.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|++|+||| .+++.+..+.+|...|++++|+|+++
T Consensus       108 ~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~  162 (425)
T 1r5m_A          108 TNQVTCLAWSH-DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGT  162 (425)
T ss_dssp             CBCEEEEEECT-TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSS
T ss_pred             CCceEEEEEcC-CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCC
Confidence            34799999999 799999999999999999 78889999999999999999999875

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=98.41  E-value=5.9e-07  Score=77.10  Aligned_cols=56  Identities=23%  Similarity=0.386  Sum_probs=48.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-------------cCCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-------------GHRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-------------GHTkkVtSVaFhPd~  292 (294)
                      ...|++++|+|.++++|++|+.|++|+|||+.+++....+.             +|...|++++|+|++
T Consensus        43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  111 (408)
T 4a11_B           43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD  111 (408)
T ss_dssp             SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC
T ss_pred             CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC
Confidence            56899999998558999999999999999999987666553             699999999999943

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=98.41  E-value=4.3e-07  Score=76.84  Aligned_cols=57  Identities=14%  Similarity=0.023  Sum_probs=50.4

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc---eEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ---VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK---vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +...|.+++|+| ++++|++|+.|++|+|||+.+++   .+..+.+|...|++++|+|+++
T Consensus        10 h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~   69 (342)
T 1yfq_A           10 PKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTD   69 (342)
T ss_dssp             CSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSS
T ss_pred             CCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCC
Confidence            356799999999 68999999999999999998877   4566779999999999999875

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=98.40  E-value=9.6e-07  Score=77.09  Aligned_cols=55  Identities=18%  Similarity=0.167  Sum_probs=50.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+ +++.+.++.+|...|++++|+|+++
T Consensus       163 ~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~  217 (383)
T 3ei3_B          163 DYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCD  217 (383)
T ss_dssp             SCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCT
T ss_pred             CCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCC
Confidence            45799999999 6899999999999999999 6888999999999999999999875

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=98.40  E-value=6.7e-07  Score=81.64  Aligned_cols=53  Identities=11%  Similarity=0.164  Sum_probs=50.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc-CCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG-HRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG-HTkkVtSVaFhP  290 (294)
                      ...|++++|+| ++.+|++|+.|+.|+|||+.+++++.++.+ |...|++++|+|
T Consensus       488 ~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp  541 (615)
T 1pgu_A          488 RAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKP  541 (615)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECC
T ss_pred             cCceEEEEECC-CCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcC
Confidence            56799999999 799999999999999999999999999999 999999999999

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=98.40  E-value=7.4e-07  Score=80.85  Aligned_cols=58  Identities=10%  Similarity=0.231  Sum_probs=51.2

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +...|++|+|+|....+|++|+.|++|+|||+++ .+++.++.+|...|++++|+|+++
T Consensus       276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~  334 (430)
T 2xyi_A          276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE  334 (430)
T ss_dssp             CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCT
T ss_pred             CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCC
Confidence            3567999999995344799999999999999998 678999999999999999999875

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=98.39  E-value=6.8e-07  Score=75.94  Aligned_cols=55  Identities=13%  Similarity=0.192  Sum_probs=49.8

Q ss_pred             CCCEEEEEeccC-CCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVE-DTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSps-DgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|.+++|++. ++++|++|+.|++|+|||+.+++  .+..+.+|...|++++|+|+
T Consensus        55 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~  112 (379)
T 3jrp_A           55 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPH  112 (379)
T ss_dssp             SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred             CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCC
Confidence            567999999862 27899999999999999999987  88899999999999999998

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=98.39  E-value=8.5e-07  Score=79.51  Aligned_cols=54  Identities=22%  Similarity=0.356  Sum_probs=50.4

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|.+++|++ ++.+|+||+.|++|+|||+.+++++.+|++|...|++++|++.
T Consensus       310 ~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~  363 (393)
T 1erj_A          310 KDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG  363 (393)
T ss_dssp             SSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred             cCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCC
Confidence            45699999998 6899999999999999999999999999999999999999874

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=98.39  E-value=1.2e-06  Score=73.80  Aligned_cols=55  Identities=18%  Similarity=0.329  Sum_probs=50.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+| ++++|+||+.|++|+|||+.+.+.+..+.+| ..|+++.|+|++.
T Consensus       215 ~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~  269 (340)
T 4aow_A          215 TGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRY  269 (340)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSS
T ss_pred             CCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCc
Confidence            45799999999 7999999999999999999999999999876 6899999999753

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=98.38  E-value=6.3e-07  Score=77.91  Aligned_cols=54  Identities=11%  Similarity=0.166  Sum_probs=50.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC----cceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT----EQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT----gKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|.+++|+| ++.+|++|+.|++|+|||+.+    .+.+.++.+|...|++++|+|+
T Consensus        67 ~~~v~~~~~s~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~  124 (416)
T 2pm9_A           67 DSKFNDLDWSH-NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK  124 (416)
T ss_dssp             SSCEEEEEECS-SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS
T ss_pred             CCceEEEEECC-CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC
Confidence            45799999998 799999999999999999988    4689999999999999999998

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=98.38  E-value=6.1e-07  Score=85.80  Aligned_cols=56  Identities=21%  Similarity=0.331  Sum_probs=52.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+.+++.+.++.+|...|++++|+|+++
T Consensus        55 ~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~  110 (814)
T 3mkq_A           55 ETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP  110 (814)
T ss_dssp             SSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred             CCcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCC
Confidence            45799999999 799999999999999999999999999999999999999999875

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=98.38  E-value=7.5e-07  Score=85.81  Aligned_cols=58  Identities=16%  Similarity=0.233  Sum_probs=50.9

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-----ceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-----QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-----KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      |...|++|+|++.++++|+|||.|++|+|||+.+.     .+...|.+|+..|++|+|+|+++
T Consensus       381 H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~  443 (694)
T 3dm0_A          381 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ  443 (694)
T ss_dssp             CSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS
T ss_pred             CCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC
Confidence            46789999999866789999999999999999763     45678999999999999999875

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=98.35  E-value=1.1e-06  Score=76.75  Aligned_cols=54  Identities=7%  Similarity=0.246  Sum_probs=48.8

Q ss_pred             CCCEEEEEeccCCC-CEEEEecCCCcEEEEeCCCcceEEEec--cCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDT-SKILTGGNDCQATVFNKDTEQVVAILK--GHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDg-nlLATGG~DGTVkVWDleTgKvV~TLk--GHTkkVtSVaFhPd  291 (294)
                      ...|.+++|+| ++ ++|++|+.|++|+|||+.+++....++  +|...|++++|+|+
T Consensus        73 ~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~  129 (383)
T 3ei3_B           73 DRRVTSLEWHP-THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF  129 (383)
T ss_dssp             SSCEEEEEECS-SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT
T ss_pred             CCCEEEEEECC-CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC
Confidence            56799999999 56 899999999999999999988887776  79999999999994

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=98.34  E-value=7.1e-07  Score=91.17  Aligned_cols=56  Identities=5%  Similarity=0.082  Sum_probs=50.6

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc---------------------------------------------
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE---------------------------------------------  270 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg---------------------------------------------  270 (294)
                      +...|.+|+|+| ++.+||+|+.|++|+|||+.++                                             
T Consensus       487 h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  565 (902)
T 2oaj_A          487 KELAVDKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF  565 (902)
T ss_dssp             SSCCEEEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred             CCCceeEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence            345799999999 7999999999999999999876                                             


Q ss_pred             ceEEEeccCCCcEEEEEECCCC
Q psy12461        271 QVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       271 KvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +++.+|.+|...|++|+|+|++
T Consensus       566 ~~~~~l~~h~~~V~svafSpdG  587 (902)
T 2oaj_A          566 MPSTAVHANKGKTSAINNSNIG  587 (902)
T ss_dssp             EEEEEECCCSCSEEEEEECBTS
T ss_pred             ceeEEEEcCCCcEEEEEecCCc
Confidence            3578999999999999999987

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=98.32  E-value=1.8e-06  Score=74.11  Aligned_cols=56  Identities=23%  Similarity=0.346  Sum_probs=49.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc----------------------------------------------
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE----------------------------------------------  270 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg----------------------------------------------  270 (294)
                      ...|.+++|+| ++++|++|+.|+.|+|||+.++                                              
T Consensus       245 ~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~  323 (408)
T 4a11_B          245 NGKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYS  323 (408)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTT
T ss_pred             cCceeEEEEcC-CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcC
Confidence            46799999999 6999999999999999998653                                              


Q ss_pred             -ceEEEeccCCCcEEEEEECCCCC
Q psy12461        271 -QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       271 -KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                       +++.++.+|...|++++|+|+++
T Consensus       324 ~~~~~~~~~~~~~v~~~~~s~~~~  347 (408)
T 4a11_B          324 GEQITMLKGHYKTVDCCVFQSNFQ  347 (408)
T ss_dssp             CCEEEEECCCSSCEEEEEEETTTT
T ss_pred             CcceeeeccCCCeEEEEEEcCCCC
Confidence             56778899999999999999875

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=98.32  E-value=9.7e-07  Score=76.49  Aligned_cols=56  Identities=13%  Similarity=0.138  Sum_probs=52.5

Q ss_pred             CCCEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcceEEEecc-------------CCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGND---CQATVFNKDTEQVVAILKG-------------HRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgKvV~TLkG-------------HTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|   +.|+|||+.+++++.++.+             |...|++++|+|+++
T Consensus       233 ~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  304 (397)
T 1sq9_A          233 SNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE  304 (397)
T ss_dssp             CCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS
T ss_pred             CCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC
Confidence            45799999999 69999999999   9999999999999999999             999999999999875

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=98.31  E-value=1.1e-06  Score=74.25  Aligned_cols=53  Identities=13%  Similarity=0.193  Sum_probs=49.2

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccC-CCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH-RKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGH-TkkVtSVaFhPd~~  293 (294)
                      ..|.+++|+| ++++|++|+.|+.|+|||+.+++++.++.+| ..+|++++  |+++
T Consensus       252 ~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~  305 (342)
T 1yfq_A          252 YPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDN  305 (342)
T ss_dssp             CCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSS
T ss_pred             eeEEEEEEcC-CCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCC
Confidence            3799999999 6899999999999999999999999999999 99999999  7764

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=98.31  E-value=5.1e-07  Score=81.83  Aligned_cols=58  Identities=12%  Similarity=0.088  Sum_probs=48.7

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE---EeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA---ILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~---TLkGHTkkVtSVaFhPd~~  293 (294)
                      +...|++|+|+|....+|++|+.|++|+|||+++.+...   ...+|...|++|+|+|+++
T Consensus       249 h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~  309 (435)
T 4e54_B          249 HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA  309 (435)
T ss_dssp             CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS
T ss_pred             ccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC
Confidence            356799999999545689999999999999998876444   3478999999999999875

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=98.31  E-value=1.8e-06  Score=72.15  Aligned_cols=56  Identities=13%  Similarity=0.197  Sum_probs=50.4

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|++|++||+.+++  ....+.+|...|++++|+|+++
T Consensus        97 ~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  154 (337)
T 1gxr_A           97 DNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK  154 (337)
T ss_dssp             TSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS
T ss_pred             CCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC
Confidence            45799999999 78999999999999999999887  7788999999999999999865

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=98.31  E-value=1e-06  Score=75.81  Aligned_cols=56  Identities=16%  Similarity=0.096  Sum_probs=52.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--------------------eEEEeccCCC--cEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--------------------VVAILKGHRK--KVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--------------------vV~TLkGHTk--kVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|+.|+|||+.+++                    ++.++.+|..  .|++++|+|+++
T Consensus       330 ~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  407 (425)
T 1r5m_A          330 GVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN  407 (425)
T ss_dssp             TCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS
T ss_pred             CccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc
Confidence            45799999999 69999999999999999999988                    9999999977  999999999875

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=98.28  E-value=2.4e-06  Score=76.54  Aligned_cols=54  Identities=11%  Similarity=0.207  Sum_probs=50.7

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      +...|.+++|+| ++++|++|+.|++|+|||+++++++.++++|...|+++.|++
T Consensus       309 ~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~  362 (464)
T 3v7d_B          309 HTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD  362 (464)
T ss_dssp             CSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS
T ss_pred             CCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC
Confidence            356799999998 689999999999999999999999999999999999999986

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.28  E-value=9.8e-07  Score=89.13  Aligned_cols=54  Identities=17%  Similarity=0.239  Sum_probs=48.9

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc-------eEEEe----ccCCCcEEEEEECCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ-------VVAIL----KGHRKKVTRVVYHPSE  292 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK-------vV~TL----kGHTkkVtSVaFhPd~  292 (294)
                      ..|.+++||| |+++||+|+.||+|+|||+.+++       .+.++    .||..+|.+|+|+|++
T Consensus       130 ~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg  194 (588)
T 2j04_A          130 RTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV  194 (588)
T ss_dssp             TCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred             ccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc
Confidence            3699999999 89999999999999999999886       37887    7888999999999985

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.26  E-value=7.3e-07  Score=86.28  Aligned_cols=54  Identities=6%  Similarity=-0.016  Sum_probs=50.5

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .|.+|+|+| ++..+++++.|++|+|||+++++++.+|.+|...|++|+|+|+++
T Consensus       357 ~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~  410 (524)
T 2j04_B          357 NLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP  410 (524)
T ss_dssp             SCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC
T ss_pred             cccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCC
Confidence            478999999 688999999999999999999999999999999999999999875

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=98.26  E-value=1.5e-06  Score=78.88  Aligned_cols=55  Identities=18%  Similarity=0.217  Sum_probs=49.9

Q ss_pred             CCCEEEEEeccCC---CCEEEEecCCCcEEEEeCCCcceEEE-eccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVED---TSKILTGGNDCQATVFNKDTEQVVAI-LKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsD---gnlLATGG~DGTVkVWDleTgKvV~T-LkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| +   +.+|++|+.|++|+|||+.+++++.+ +.+|...|++++|+ +++
T Consensus       195 ~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~  253 (450)
T 2vdu_B          195 VSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY  253 (450)
T ss_dssp             SSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT
T ss_pred             cCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC
Confidence            45799999999 6   78999999999999999999998887 67999999999999 764

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=98.26  E-value=1.9e-06  Score=76.61  Aligned_cols=54  Identities=9%  Similarity=0.136  Sum_probs=49.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-cCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-GHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-GHTkkVtSVaFhPd  291 (294)
                      ...|++++|+| ++++|++|+.|++|+|||+++++++.++. +|..+|++++|+|.
T Consensus       214 ~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~  268 (437)
T 3gre_A          214 HGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF  268 (437)
T ss_dssp             GCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred             CCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence            35799999999 69999999999999999999999999997 88899999988774

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=98.25  E-value=2.4e-06  Score=86.54  Aligned_cols=56  Identities=18%  Similarity=0.255  Sum_probs=52.4

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +...|.+++|+| ++++|+||+.|++|+|||+.+++++.++.+|...|+++.|+|++
T Consensus       656 h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~  711 (1249)
T 3sfz_A          656 HEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKS  711 (1249)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred             CCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCC
Confidence            356799999999 79999999999999999999999999999999999999999964

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=98.25  E-value=9.2e-07  Score=74.75  Aligned_cols=53  Identities=15%  Similarity=0.171  Sum_probs=47.4

Q ss_pred             CCCEEEEEeccCC--CCEEEEecCCCcEEEEeCCCcc-eEEEeccCCCcEEEEEEC
Q psy12461        237 VPGILAMDIQVED--TSKILTGGNDCQATVFNKDTEQ-VVAILKGHRKKVTRVVYH  289 (294)
Q Consensus       237 ~pGIlSLdfSpsD--gnlLATGG~DGTVkVWDleTgK-vV~TLkGHTkkVtSVaFh  289 (294)
                      ...|.+++|+|..  +++|++|+.|++|+|||+.+++ .+.++.+|...|+++.|.
T Consensus        65 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~  120 (357)
T 3i2n_A           65 AKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGI  120 (357)
T ss_dssp             SSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEE
T ss_pred             cCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeec
Confidence            4579999999832  6899999999999999999988 999999999999999653

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=98.24  E-value=3.1e-06  Score=76.79  Aligned_cols=57  Identities=9%  Similarity=0.150  Sum_probs=51.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc---ceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE---QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg---KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+|.++.+|++|+.|++|+|||++++   +.+.++.+|...|++++|+|+++
T Consensus       231 ~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~  290 (430)
T 2xyi_A          231 TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSE  290 (430)
T ss_dssp             SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCT
T ss_pred             CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCC
Confidence            4579999999966889999999999999999987   68889999999999999999875

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=98.23  E-value=2.3e-06  Score=74.89  Aligned_cols=54  Identities=15%  Similarity=0.293  Sum_probs=48.1

Q ss_pred             CEEEE-EeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAM-DIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSL-dfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+.++ .|++ ++++|++|+.|++|+|||+.+++++..+.+|...|++++|+|+++
T Consensus        98 ~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~  152 (420)
T 3vl1_A           98 DYTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGE  152 (420)
T ss_dssp             CEEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSS
T ss_pred             CceEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCC
Confidence            45554 5676 789999999999999999999999999999999999999999875

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=98.23  E-value=3.2e-06  Score=75.33  Aligned_cols=53  Identities=11%  Similarity=0.245  Sum_probs=49.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+.+++.+.++.+|...|+++.|++
T Consensus       134 ~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  186 (401)
T 4aez_A          134 STYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR  186 (401)
T ss_dssp             TCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET
T ss_pred             CCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC
Confidence            45799999999 799999999999999999999999999999999999999965

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=98.22  E-value=3e-06  Score=75.89  Aligned_cols=52  Identities=15%  Similarity=0.258  Sum_probs=48.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ...|.+++|++ ++ +|+||+.|++|+|||+++++++.++.+|...|++++|++
T Consensus       162 ~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~  213 (464)
T 3v7d_B          162 DGGVWALKYAH-GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE  213 (464)
T ss_dssp             SSCEEEEEECS-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEE
T ss_pred             CcCEEEEEEcC-CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEec
Confidence            56799999997 34 999999999999999999999999999999999999985

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=98.22  E-value=2.4e-06  Score=77.58  Aligned_cols=56  Identities=18%  Similarity=0.264  Sum_probs=49.9

Q ss_pred             CCCEEEEEeccCCCCEE-EEecCCCcEEEEeCC--CcceEEEec--cCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKI-LTGGNDCQATVFNKD--TEQVVAILK--GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDle--TgKvV~TLk--GHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++| ++|+.|++|+|||+.  +++++..+.  +|...|++++|+|+++
T Consensus       102 ~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~  162 (450)
T 2vdu_B          102 YSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT  162 (450)
T ss_dssp             CCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred             CCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence            35799999999 68885 999999999999999  899999987  6679999999999875

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=98.21  E-value=3e-06  Score=73.93  Aligned_cols=56  Identities=14%  Similarity=0.095  Sum_probs=47.9

Q ss_pred             CCEEEEEeccC-CCCEEEEecCCCcEEEEeCCCcceEEEecc-CCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVE-DTSKILTGGNDCQATVFNKDTEQVVAILKG-HRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSps-DgnlLATGG~DGTVkVWDleTgKvV~TLkG-HTkkVtSVaFhPd~~  293 (294)
                      ..|.+++|+|. ++++|+||+.|++|+|||+++++++..+.. |...|++++|+|+++
T Consensus       126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~  183 (343)
T 3lrv_A          126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL  183 (343)
T ss_dssp             SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC
T ss_pred             CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC
Confidence            46999999981 378999999999999999999999887754 455899999999875

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=98.19  E-value=1.5e-06  Score=85.92  Aligned_cols=54  Identities=20%  Similarity=0.253  Sum_probs=50.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCC--CcceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKD--TEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDle--TgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|++++|+| ++++|++|+.||+|+|||+.  +++++.++.+|..+|++++|+|+
T Consensus         9 ~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~   64 (753)
T 3jro_A            9 NELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP   64 (753)
T ss_dssp             CCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCT
T ss_pred             cceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCC
Confidence            56799999999 68999999999999999998  66889999999999999999987

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=98.16  E-value=1.7e-06  Score=82.66  Aligned_cols=57  Identities=14%  Similarity=0.099  Sum_probs=47.7

Q ss_pred             CCCEEEEEeccC--CCCEEEEecCCCcEEEEeCCCcceEEEeccCC---CcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVE--DTSKILTGGNDCQATVFNKDTEQVVAILKGHR---KKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSps--DgnlLATGG~DGTVkVWDleTgKvV~TLkGHT---kkVtSVaFhPd~~  293 (294)
                      .+.+..++|++.  ++.+||||+.|++|+|||+.+++++++|++|.   ..|.+++|+|+++
T Consensus       178 ~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~  239 (356)
T 2w18_A          178 PPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGL  239 (356)
T ss_dssp             CCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTE
T ss_pred             CCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCC
Confidence            456777777762  56899999999999999999999999999764   4678889999864

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=98.14  E-value=5.2e-06  Score=73.78  Aligned_cols=56  Identities=13%  Similarity=0.150  Sum_probs=50.1

Q ss_pred             CCCEEEEE--eccCCCCEEEEecCCCcEEEEeCCCcceEEEecc--CCCcEEEEEECCCCC
Q psy12461        237 VPGILAMD--IQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG--HRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLd--fSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG--HTkkVtSVaFhPd~~  293 (294)
                      ...+.++.  +++ ++++|++|+.|++|+|||+++++++.++++  |...|++++|+|+++
T Consensus       168 ~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~  227 (437)
T 3gre_A          168 NEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECC  227 (437)
T ss_dssp             CCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSC
T ss_pred             ccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCC
Confidence            45688888  556 688999999999999999999999999999  899999999999865

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=98.12  E-value=2.1e-06  Score=77.29  Aligned_cols=46  Identities=7%  Similarity=-0.033  Sum_probs=41.6

Q ss_pred             CCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        249 DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       249 DgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ++.++++|+.|++|+|||+.+++.+.++.+|..+|++|+|+|++++
T Consensus       328 ~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~  373 (393)
T 4gq1_A          328 MDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSH  373 (393)
T ss_dssp             TTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSE
T ss_pred             CCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCE
Confidence            4457788999999999999999999999999999999999999874

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=98.12  E-value=3.4e-06  Score=86.15  Aligned_cols=55  Identities=5%  Similarity=-0.037  Sum_probs=48.2

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-----Eec-cCCCcEEEEEEC-----CCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-----ILK-GHRKKVTRVVYH-----PSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-----TLk-GHTkkVtSVaFh-----Pd~  292 (294)
                      +...|++|+|+| |+ +||+|+.|++|+|||+++..++.     .|. +|+..|++|+|+     ||+
T Consensus       574 h~~~V~svafSp-dG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg  639 (902)
T 2oaj_A          574 NKGKTSAINNSN-IG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDG  639 (902)
T ss_dssp             CSCSEEEEEECB-TS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSS
T ss_pred             CCCcEEEEEecC-Cc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCC
Confidence            356799999999 78 99999999999999999887764     354 999999999999     875

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=98.08  E-value=5.1e-06  Score=79.34  Aligned_cols=51  Identities=12%  Similarity=0.028  Sum_probs=41.7

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEE-EEEECCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVT-RVVYHPSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVt-SVaFhPd~~  293 (294)
                      +.+.+++   +.++|+|+.|++|+|||+.+++++++|++|...|. +|+|+|+++
T Consensus       288 ~lsg~~s---g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~  339 (356)
T 2w18_A          288 FLEGDVK---DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDS  339 (356)
T ss_dssp             EEEEEEE---TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSS
T ss_pred             eEccccC---CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCC
Confidence            4444444   56899999999999999999999999999988766 589999976

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=98.03  E-value=1.1e-05  Score=81.52  Aligned_cols=54  Identities=13%  Similarity=0.083  Sum_probs=47.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCc-----EEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKK-----VTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkk-----VtSVaFhPd~~Q  294 (294)
                      .+.|.+++|+| ++.+||+++.||+|+|||.++  ++.++. |..+     |.+++|+|+++.
T Consensus        85 ~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~  143 (588)
T 2j04_A           85 VCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESS  143 (588)
T ss_dssp             SCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSC
T ss_pred             CCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCE
Confidence            46799999999 799999999999999999655  888888 7764     999999999864

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=98.01  E-value=1.5e-05  Score=71.87  Aligned_cols=52  Identities=19%  Similarity=0.381  Sum_probs=46.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|.+++|+   +++|++|+.|++|+|||+.+++++.++.+|...|+++.|+++
T Consensus       173 ~~~v~~l~~~---~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~  224 (435)
T 1p22_A          173 TGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG  224 (435)
T ss_dssp             SSCEEEEECC---SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTT
T ss_pred             CCcEEEEEEC---CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC
Confidence            5679999984   679999999999999999999999999999999999999763

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=98.01  E-value=1.3e-05  Score=71.95  Aligned_cols=55  Identities=15%  Similarity=0.261  Sum_probs=49.1

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe-----ccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL-----KGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL-----kGHTkkVtSVaFhPd~~  293 (294)
                      +...|.+++|+   +++|++|+.|++|+|||+.+++.+.++     .+|...|++++|+|++.
T Consensus       361 ~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  420 (445)
T 2ovr_B          361 HQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL  420 (445)
T ss_dssp             CSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE
T ss_pred             CCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEE
Confidence            45679999997   479999999999999999999999988     58899999999999853

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=98.00  E-value=1.7e-05  Score=71.51  Aligned_cols=54  Identities=26%  Similarity=0.448  Sum_probs=48.0

Q ss_pred             CCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        234 SASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       234 Sas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ..+..+|.|++++   +++|++|+.|++|+|||+.+++++.++.+|...|++++|.+
T Consensus       130 ~~~~~~v~~~~~d---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~  183 (435)
T 1p22_A          130 SETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE  183 (435)
T ss_dssp             CSSCCCEEEEECC---SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCS
T ss_pred             cCCCCcEEEEEEC---CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECC
Confidence            3345689999984   68999999999999999999999999999999999999943

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=97.99  E-value=1.1e-05  Score=79.70  Aligned_cols=55  Identities=13%  Similarity=0.192  Sum_probs=50.0

Q ss_pred             CCCEEEEEeccC-CCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVE-DTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSps-DgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...|.+++|++. ++++|+||+.||+|+|||+.+++  .+..+.+|...|++++|+|+
T Consensus        53 ~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~  110 (753)
T 3jro_A           53 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPH  110 (753)
T ss_dssp             SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred             cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCC
Confidence            567999999872 28899999999999999999987  88899999999999999998

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=97.99  E-value=1.2e-05  Score=77.80  Aligned_cols=54  Identities=15%  Similarity=0.100  Sum_probs=46.4

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCc-ceEEEeccCCCcEEEE--EECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTE-QVVAILKGHRKKVTRV--VYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTg-KvV~TLkGHTkkVtSV--aFhPd~  292 (294)
                      ...|+|++|++  +++|++|+.||+|+|||++++ .++.++.+|+..|++|  .|+|++
T Consensus       266 ~~~v~sv~~s~--~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g  322 (524)
T 2j04_B          266 DSLITTFDFLS--PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFE  322 (524)
T ss_dssp             TTCEEEEEESS--SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTS
T ss_pred             CCCEEEEEecC--CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCC
Confidence            45799999997  368999999999999999987 4566799999999999  577765

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=97.96  E-value=1.3e-05  Score=70.69  Aligned_cols=56  Identities=14%  Similarity=0.071  Sum_probs=51.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|++ ++.++++++.|++|++||+++++++.++.+|...+++++|+|+++
T Consensus       169 ~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (433)
T 3bws_A          169 LGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRD  224 (433)
T ss_dssp             CCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTT
T ss_pred             CCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCC
Confidence            45699999988 688999999999999999999999999999999999999999875

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=97.94  E-value=5.8e-06  Score=77.06  Aligned_cols=54  Identities=15%  Similarity=0.173  Sum_probs=46.8

Q ss_pred             CCEEEEEeccCCCCEEE----EecCCCcEEEEeCCCc--------c---eEEEeccCCCcEEEEEECCCC
Q psy12461        238 PGILAMDIQVEDTSKIL----TGGNDCQATVFNKDTE--------Q---VVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLA----TGG~DGTVkVWDleTg--------K---vV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ..|.+++|+| ++++||    +|+.|++|+|||+.++        +   .+..+++|...|++|+|+|+.
T Consensus        93 ~~v~~l~~sp-dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~  161 (434)
T 2oit_A           93 FPIHHLALSC-DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV  161 (434)
T ss_dssp             SCEEEEEECT-TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC
T ss_pred             CcccEEEEcC-CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC
Confidence            4699999999 689998    8999999999999765        2   256788999999999999973

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=97.88  E-value=3.3e-05  Score=69.33  Aligned_cols=51  Identities=24%  Similarity=0.438  Sum_probs=45.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ...|.+++|+   +++|++|+.|++|+|||+.+++++.++.+|...|+++.|++
T Consensus       159 ~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~  209 (445)
T 2ovr_B          159 TGGVWSSQMR---DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE  209 (445)
T ss_dssp             SSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET
T ss_pred             CCCEEEEEec---CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC
Confidence            5679999997   36899999999999999999999999999999999999865

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=97.87  E-value=3.1e-05  Score=67.29  Aligned_cols=54  Identities=15%  Similarity=0.253  Sum_probs=47.9

Q ss_pred             CCEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+++|+| ++++| ++++.|++|++||+.+++++.++..|. .|++++|+|+++
T Consensus        32 ~~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~   86 (391)
T 1l0q_A           32 SNPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGK   86 (391)
T ss_dssp             SSEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSS
T ss_pred             CCcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCC
Confidence            3589999999 67765 788899999999999999999998875 999999999876

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=97.70  E-value=8.2e-05  Score=68.12  Aligned_cols=55  Identities=9%  Similarity=0.038  Sum_probs=48.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCC---cEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDC---QATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DG---TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++++.|+   +|++||+.++++. .+.+|...+.+++|+|+++
T Consensus       178 ~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~  235 (415)
T 2hqs_A          178 PQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGS  235 (415)
T ss_dssp             SSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSS
T ss_pred             CCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCC
Confidence            35699999999 799999999886   9999999999875 5788889999999999986

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=97.66  E-value=4.8e-05  Score=61.60  Aligned_cols=55  Identities=9%  Similarity=-0.086  Sum_probs=47.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-cceEEEeccCC-CcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDT-EQVVAILKGHR-KKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-gKvV~TLkGHT-kkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++++ ++.|++||+.+ ++....+.+|. ..|.+++|+|+++
T Consensus        41 ~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~   97 (297)
T 2ojh_A           41 PELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA   97 (297)
T ss_dssp             SSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred             CcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence            35699999999 799999987 88999999999 88888887774 7899999999976

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=97.48  E-value=0.0002  Score=63.48  Aligned_cols=50  Identities=10%  Similarity=0.016  Sum_probs=39.5

Q ss_pred             EEEEeccCCCCEEEE--ecCCCcEEEEeCCCcc----------------eEEEeccCCCcEEEEEECCCCC
Q psy12461        241 LAMDIQVEDTSKILT--GGNDCQATVFNKDTEQ----------------VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       241 lSLdfSpsDgnlLAT--GG~DGTVkVWDleTgK----------------vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+++++   +++++  |+.|++|+|||+.+++                ++.++++|..+|++++|+|+++
T Consensus       141 ~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~  208 (355)
T 3vu4_A          141 GVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD  208 (355)
T ss_dssp             EEEEEET---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS
T ss_pred             ceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC
Confidence            3455665   45555  7999999999999876                3789999999999999999875

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=97.46  E-value=0.00031  Score=61.00  Aligned_cols=54  Identities=19%  Similarity=0.271  Sum_probs=47.2

Q ss_pred             CCEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+++|+| ++++| ++++.|+.|++||+.+++++..+..| ..+.+++|+|+++
T Consensus       116 ~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~  170 (391)
T 1l0q_A          116 KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGT  170 (391)
T ss_dssp             SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSS
T ss_pred             CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCC
Confidence            3589999998 67766 79999999999999999999999887 4579999999875

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=97.43  E-value=0.0004  Score=63.56  Aligned_cols=54  Identities=17%  Similarity=0.109  Sum_probs=46.1

Q ss_pred             CCEEEEEeccCCCCEEE-EecCCCc--EEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKIL-TGGNDCQ--ATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLA-TGG~DGT--VkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+++|+| |+++|+ +++.|+.  |++||+.++++ ..+.+|...+++++|+|+++
T Consensus       223 ~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~  279 (415)
T 2hqs_A          223 RHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQ  279 (415)
T ss_dssp             SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSS
T ss_pred             CcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCC
Confidence            4689999999 788777 7777665  99999999886 67889999999999999986

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=97.38  E-value=0.00026  Score=72.18  Aligned_cols=57  Identities=9%  Similarity=0.141  Sum_probs=52.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...+.+++|+| |+++|++++.|++|++||+.++++...+.+|...|.+++|+||+++
T Consensus       378 ~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~  434 (1045)
T 1k32_A          378 LGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRF  434 (1045)
T ss_dssp             CCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCE
T ss_pred             ccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCe
Confidence            35689999999 7999999999999999999999998888899999999999999863

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=97.28  E-value=0.00063  Score=59.88  Aligned_cols=55  Identities=4%  Similarity=-0.147  Sum_probs=46.9

Q ss_pred             CCCEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...+.+++|+| +++++ ++++.|++|++||+++++++.++..+ ..+.+++|+|+++
T Consensus       211 ~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~  266 (433)
T 3bws_A          211 GKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGK  266 (433)
T ss_dssp             SSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSS
T ss_pred             CCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCC
Confidence            35699999998 56666 67778999999999999999999876 4599999999875

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=97.27  E-value=0.00027  Score=67.54  Aligned_cols=56  Identities=11%  Similarity=0.192  Sum_probs=48.0

Q ss_pred             CCEEEEEeccCCCCEEEEecC-CC-----cEEEEeCCCcceEEEeccCCCc------------------------EEEEE
Q psy12461        238 PGILAMDIQVEDTSKILTGGN-DC-----QATVFNKDTEQVVAILKGHRKK------------------------VTRVV  287 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~-DG-----TVkVWDleTgKvV~TLkGHTkk------------------------VtSVa  287 (294)
                      ..|.+++|+| |+++|++++. |+     +|++||+.+++....+..|...                        |.+++
T Consensus        37 ~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           37 PTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            4689999999 7999999998 88     9999999999988877765433                        89999


Q ss_pred             ECCCCCC
Q psy12461        288 YHPSELQ  294 (294)
Q Consensus       288 FhPd~~Q  294 (294)
                      |+||+++
T Consensus       116 ~SpDg~~  122 (741)
T 2ecf_A          116 WSPDAQR  122 (741)
T ss_dssp             ECTTSSE
T ss_pred             ECCCCCE
Confidence            9999863

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=97.25  E-value=0.00059  Score=55.19  Aligned_cols=55  Identities=13%  Similarity=-0.084  Sum_probs=46.6

Q ss_pred             CCEEEEEeccCCCCEEEEec-CCCcEEEEeCC-CcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGG-NDCQATVFNKD-TEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG-~DGTVkVWDle-TgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+++|+| ++++|+.++ .|+.++||++. .+..+..+..|...+.++.|+|+++
T Consensus       173 ~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~  229 (297)
T 2ojh_A          173 GRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGD  229 (297)
T ss_dssp             SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSS
T ss_pred             CccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCC
Confidence            4689999999 688776554 69999999986 5667888999999999999999986

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=97.00  E-value=0.00033  Score=66.60  Aligned_cols=55  Identities=13%  Similarity=0.004  Sum_probs=45.0

Q ss_pred             CEEEEEeccCCCCEEEEecCC---------CcEEEEeCCCcce--EEEeccCCCcEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGND---------CQATVFNKDTEQV--VAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~D---------GTVkVWDleTgKv--V~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .|.+++||| |+++||+++.|         +++.|||+.++++  +....+|...|.+++|+||+++
T Consensus        62 ~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~  127 (723)
T 1xfd_A           62 RAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQ  127 (723)
T ss_dssp             TCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTC
T ss_pred             ccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCE
Confidence            589999999 79999999875         7788999999876  3334566667999999999864

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=96.98  E-value=0.00015  Score=68.85  Aligned_cols=54  Identities=15%  Similarity=0.175  Sum_probs=46.4

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCC---cEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRK---KVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTk---kVtSVaFhPd~~Q  294 (294)
                      .+.+++|+| |++++++ +.|++|++||+.++++...+.+|..   .|.+++|+||+++
T Consensus        18 ~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~   74 (723)
T 1xfd_A           18 HDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREY   74 (723)
T ss_dssp             CCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSE
T ss_pred             cccccEEcC-CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCE
Confidence            356788998 7888777 7899999999999999999988875   4999999999863

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=96.95  E-value=0.00068  Score=63.52  Aligned_cols=52  Identities=8%  Similarity=-0.008  Sum_probs=46.0

Q ss_pred             EEEEeccCCCCEEEEecCC----CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        241 LAMDIQVEDTSKILTGGND----CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~D----GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .+++|+| |+++|++++.|    .+|++||+.++++. .|.+|...+.+++|+||+++
T Consensus       153 ~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~  208 (582)
T 3o4h_A          153 FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKV  208 (582)
T ss_dssp             CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCE
T ss_pred             ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCE
Confidence            6889999 79999988877    88999999998854 78899999999999999863

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=96.87  E-value=0.00063  Score=65.02  Aligned_cols=53  Identities=17%  Similarity=0.157  Sum_probs=45.8

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +|.+++|+| |+++|++++. ++|++||+.+++  .+..+..|...+.+++|+||++
T Consensus       110 ~v~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~  164 (741)
T 2ecf_A          110 GIVDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGG  164 (741)
T ss_dssp             ESCCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSS
T ss_pred             CcceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCC
Confidence            367789999 7999999886 999999999883  4567888999999999999986

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=96.85  E-value=0.0022  Score=53.49  Aligned_cols=52  Identities=4%  Similarity=-0.040  Sum_probs=44.7

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+++|+| ++++++++  |+.|.+||+.+++++..+..+ ..+.+++|+|+++
T Consensus       241 ~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~  292 (337)
T 1pby_B          241 VFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGS  292 (337)
T ss_dssp             SCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSC
T ss_pred             CceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCC
Confidence            3578899999 78888888  799999999999999888754 5688999999976

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=96.84  E-value=0.002  Score=55.40  Aligned_cols=54  Identities=13%  Similarity=0.158  Sum_probs=44.9

Q ss_pred             CEEEEEeccCCCCEE-EEecCCCcEEEEeCCC---cceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKI-LTGGNDCQATVFNKDT---EQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlL-ATGG~DGTVkVWDleT---gKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+..++|+| |+++| ++...+++|.|||+..   .+.+.++..|...+.+++|+|+++
T Consensus       241 ~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~  298 (347)
T 3hfq_A          241 GAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEA  298 (347)
T ss_dssp             EEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSS
T ss_pred             cceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCC
Confidence            488999999 78866 6777799999999973   366778888878899999999986

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=96.84  E-value=0.0023  Score=61.65  Aligned_cols=52  Identities=13%  Similarity=0.105  Sum_probs=47.1

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeC--CCcceEEEeccCCCcEEEEEECC----CCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNK--DTEQVVAILKGHRKKVTRVVYHP----SEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDl--eTgKvV~TLkGHTkkVtSVaFhP----d~~  293 (294)
                      +.+++|+| ++++|++++.|++|.+||+  .+++++.++..+ ..+..++|+|    +++
T Consensus       181 ~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-~~p~~va~sp~~~~dg~  238 (543)
T 1nir_A          181 VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-IEARSVESSKFKGYEDR  238 (543)
T ss_dssp             EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-SEEEEEEECCSTTCTTT
T ss_pred             cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-CCcceEEeCCCcCCCCC
Confidence            78999999 7999999999999999999  899999999954 5689999999    876

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=96.77  E-value=0.001  Score=62.37  Aligned_cols=51  Identities=20%  Similarity=0.186  Sum_probs=42.8

Q ss_pred             CEEEEEeccCCCCEEEEecC-CCcEEEEeCCCcceEEEeccCC-CcEEEEEECCC
Q psy12461        239 GILAMDIQVEDTSKILTGGN-DCQATVFNKDTEQVVAILKGHR-KKVTRVVYHPS  291 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~-DGTVkVWDleTgKvV~TLkGHT-kkVtSVaFhPd  291 (294)
                      .|.+++|+| |+++||+++. |++++||++.+++.. .+..|. ..|.+++|+|+
T Consensus        23 ~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd   75 (582)
T 3o4h_A           23 EKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG   75 (582)
T ss_dssp             CEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS
T ss_pred             chheeecCC-CCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC
Confidence            599999999 8999999887 999999999766654 455554 68999999997

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=96.76  E-value=0.003  Score=53.49  Aligned_cols=53  Identities=4%  Similarity=0.019  Sum_probs=44.9

Q ss_pred             CEEEEEeccCCCC-EEEEecCCCcEEEEeCCCcce---EEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQV---VAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKv---V~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +..+++|+| +++ +++++..++.|.+||+.++++   +.++..+ ..+.+++|+|+++
T Consensus       177 ~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~  233 (331)
T 3u4y_A          177 RPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGS  233 (331)
T ss_dssp             SEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSS
T ss_pred             CccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCC
Confidence            578999999 677 556677899999999999998   8888865 6778999999986

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=96.74  E-value=0.0019  Score=54.08  Aligned_cols=54  Identities=9%  Similarity=0.034  Sum_probs=43.1

Q ss_pred             CCEEEEEeccCCCCEEEEecCC-CcEEEEeCC--Ccc--eEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGND-CQATVFNKD--TEQ--VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~D-GTVkVWDle--TgK--vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+++|+| ++++|++++.+ +.|.+||+.  +++  .+..+..+. .+.+++|+|+++
T Consensus        38 ~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~   96 (343)
T 1ri6_A           38 GQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQ   96 (343)
T ss_dssp             SCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSS
T ss_pred             CCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCC
Confidence            4578899999 68877777776 999999998  554  556676654 889999999976

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=96.70  E-value=0.0023  Score=54.20  Aligned_cols=53  Identities=15%  Similarity=0.151  Sum_probs=44.1

Q ss_pred             CEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcce-EEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQV-VAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKv-V~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+ +++|+| +++++ +++..++.|.+||+.++++ +..+..+..++.+++|+|+++
T Consensus        42 ~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~   96 (331)
T 3u4y_A           42 FV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQ   96 (331)
T ss_dssp             EE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSS
T ss_pred             cc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCC
Confidence            45 999999 67754 5555589999999999998 888888888777799999986

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=96.69  E-value=0.0046  Score=55.74  Aligned_cols=52  Identities=19%  Similarity=0.335  Sum_probs=46.9

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCc--ceEEEeccCCCcEEEEEECCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTE--QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTg--KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+|+|+| |+++|++++. ++|.|||..++  +++.++..+.+.-..++|+|+++
T Consensus       307 p~~ia~sp-dg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          307 ALSMTIDQ-QRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             CCEEEEET-TTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             eeEEEECC-CCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            78899999 7888888776 99999999999  99999987888889999999986

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=96.66  E-value=0.0042  Score=51.98  Aligned_cols=54  Identities=11%  Similarity=0.002  Sum_probs=42.6

Q ss_pred             CCEEEEEeccCCCCEEE-EecCCCcEEEEeCC----CcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKIL-TGGNDCQATVFNKD----TEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLA-TGG~DGTVkVWDle----TgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+++|+| ++++|+ ++..|+.|.+||+.    +.+.+..+..+.. +.+++|+|+++
T Consensus       231 ~~~~~i~~s~-dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~  289 (343)
T 1ri6_A          231 RWAADIHITP-DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGK  289 (343)
T ss_dssp             CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSS
T ss_pred             CCccceEECC-CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCC
Confidence            3577899999 676655 67789999999998    3456777776655 99999999875

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=96.57  E-value=0.0011  Score=63.52  Aligned_cols=52  Identities=8%  Similarity=0.182  Sum_probs=43.3

Q ss_pred             CEEEEEeccCCCCEEEEecC---------CCcEEEEeCCCcceE--EEeccCCCcEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGN---------DCQATVFNKDTEQVV--AILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~---------DGTVkVWDleTgKvV--~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +|.+++||| |+++||+++.         |++|+|||+.+++++  ..+.   ..+.+++|+||+++
T Consensus        61 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~  123 (719)
T 1z68_A           61 NASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWSPVGSK  123 (719)
T ss_dssp             TCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SSBCCEEECSSTTC
T ss_pred             ceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---cccccceECCCCCE
Confidence            478999999 8999998876         799999999999874  3343   56999999999874

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=96.55  E-value=0.0034  Score=53.06  Aligned_cols=54  Identities=6%  Similarity=0.105  Sum_probs=46.3

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc----CCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG----HRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG----HTkkVtSVaFhPd~~  293 (294)
                      .+.+++|+| +++++++++.|+.+.+||..+++++..+..    +...+.+++|+|+++
T Consensus       186 ~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~  243 (353)
T 3vgz_A          186 MSTGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ  243 (353)
T ss_dssp             TCCCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred             ccceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence            367789998 788888888899999999999999888764    566788999999876

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=96.53  E-value=0.004  Score=51.94  Aligned_cols=53  Identities=6%  Similarity=0.176  Sum_probs=44.0

Q ss_pred             EEEEEeccCCCCEEEEec------------CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGG------------NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG------------~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +.+++|+| ++++|++++            .|+.|.+||+.+++++..+.. ...+.+++|+|++++
T Consensus        84 ~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~  148 (337)
T 1pby_B           84 LFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSK  148 (337)
T ss_dssp             TTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSC
T ss_pred             ccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCE
Confidence            45788998 688888775            689999999999999888876 356889999999863

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=96.47  E-value=0.0038  Score=52.78  Aligned_cols=53  Identities=9%  Similarity=0.080  Sum_probs=44.9

Q ss_pred             EEEEEeccCCCCEEEEe--cCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        240 ILAMDIQVEDTSKILTG--GNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATG--G~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +.+++|+| ++++++++  +.++.|.+||..+++++..+..+...+.+++|+|+++
T Consensus       143 ~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~  197 (353)
T 3vgz_A          143 PRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK  197 (353)
T ss_dssp             EEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred             CceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence            78899998 67765554  4689999999999999999987777799999999875

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=96.47  E-value=0.0058  Score=53.02  Aligned_cols=55  Identities=7%  Similarity=0.007  Sum_probs=41.7

Q ss_pred             CCEEEEEeccCCCCEEEEec-CCCcEEEEeCCCcce--EEEe---ccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGG-NDCQATVFNKDTEQV--VAIL---KGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG-~DGTVkVWDleTgKv--V~TL---kGHTkkVtSVaFhPd~~  293 (294)
                      .+...++|+| +++++++++ .+++|.+||+.++++  +..+   ..+...+.+++|+|+++
T Consensus       211 ~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~  271 (361)
T 3scy_A          211 SGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGK  271 (361)
T ss_dssp             CCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSS
T ss_pred             CCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCC
Confidence            4578999999 788765555 799999999987754  3333   44455678999999986

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=96.44  E-value=0.0031  Score=64.34  Aligned_cols=55  Identities=9%  Similarity=0.021  Sum_probs=47.7

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCC----------cEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDC----------QATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DG----------TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| |+++|++++.++          +|+|||+.+++ +..+.+|...+.+++|+|+++
T Consensus       420 ~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~  484 (1045)
T 1k32_A          420 EAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSK  484 (1045)
T ss_dssp             SSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSC
T ss_pred             CCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCC
Confidence            34578899999 799998887654          99999999988 788999999999999999986

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=96.30  E-value=0.0034  Score=59.79  Aligned_cols=53  Identities=13%  Similarity=0.078  Sum_probs=44.2

Q ss_pred             EEEEEeccCCCCEEEEec---------------------------------CCCcEEEEeCCCcceEEEe--ccCCCcEE
Q psy12461        240 ILAMDIQVEDTSKILTGG---------------------------------NDCQATVFNKDTEQVVAIL--KGHRKKVT  284 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG---------------------------------~DGTVkVWDleTgKvV~TL--kGHTkkVt  284 (294)
                      +.+++|+| |+++|++++                                 .+..|++||+.+++.....  ..|...|.
T Consensus       183 ~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~  261 (706)
T 2z3z_A          183 EKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT  261 (706)
T ss_dssp             CCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred             CceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence            57899999 799999887                                 5578999999998865544  25778899


Q ss_pred             EEEECCCCC
Q psy12461        285 RVVYHPSEL  293 (294)
Q Consensus       285 SVaFhPd~~  293 (294)
                      +++|+||++
T Consensus       262 ~~~~spdg~  270 (706)
T 2z3z_A          262 NLSWSPDEN  270 (706)
T ss_dssp             EEEECTTSS
T ss_pred             eEEEECCCC
Confidence            999999986

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=96.29  E-value=0.0053  Score=51.65  Aligned_cols=54  Identities=9%  Similarity=-0.024  Sum_probs=43.1

Q ss_pred             CEEEEEeccCCCCE-EEEecCCCcEEEEeCCCcceEEEeccCC------CcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSK-ILTGGNDCQATVFNKDTEQVVAILKGHR------KKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnl-LATGG~DGTVkVWDleTgKvV~TLkGHT------kkVtSVaFhPd~~  293 (294)
                      .+..++|+| ++++ ++++..++.|.+||+.+++.+..+..+.      ..+.+++|+|+++
T Consensus        44 ~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~  104 (349)
T 1jmx_B           44 GPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK  104 (349)
T ss_dssp             SSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSS
T ss_pred             CCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCC
Confidence            467889998 6764 5677789999999999999988877432      3488999999986

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=96.27  E-value=0.011  Score=49.82  Aligned_cols=53  Identities=6%  Similarity=-0.029  Sum_probs=43.4

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .+.+++|+|.++++++++  ++.|.+||+.+++++.++..+ ..+.+++|+|++++
T Consensus       256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~  308 (349)
T 1jmx_B          256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDK  308 (349)
T ss_dssp             CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSC
T ss_pred             cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCE
Confidence            467888997357888888  899999999999998888754 45789999999763

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=96.25  E-value=0.0058  Score=58.89  Aligned_cols=50  Identities=18%  Similarity=0.161  Sum_probs=42.8

Q ss_pred             eccCCCCEEEEec-CCCcEEEEeCCC-------cceEEEeccCCCcEEEEEECCCCCC
Q psy12461        245 IQVEDTSKILTGG-NDCQATVFNKDT-------EQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       245 fSpsDgnlLATGG-~DGTVkVWDleT-------gKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ++|..+.+++|+. .|++|.|||+.+       .+++++|++|...+..|+|||++++
T Consensus       377 ~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~  434 (543)
T 1nir_A          377 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH  434 (543)
T ss_dssp             EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCE
T ss_pred             CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCc
Confidence            4663467788886 689999999998       8999999999999999999999863

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=96.21  E-value=0.002  Score=61.68  Aligned_cols=51  Identities=14%  Similarity=0.126  Sum_probs=42.3

Q ss_pred             EEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCC---cEEEEEECCCCCC
Q psy12461        242 AMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRK---KVTRVVYHPSELQ  294 (294)
Q Consensus       242 SLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTk---kVtSVaFhPd~~Q  294 (294)
                      +++|+| ++.+++++ .|++|++||+.++++...+.+|..   .|.+++|+||+++
T Consensus        20 ~~~~s~-dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~   73 (719)
T 1z68_A           20 FPNWIS-GQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQF   73 (719)
T ss_dssp             CCEESS-SSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSE
T ss_pred             ccEECC-CCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCe
Confidence            578998 67666655 599999999999998888887755   4999999999863

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=96.20  E-value=0.005  Score=60.32  Aligned_cols=52  Identities=15%  Similarity=0.171  Sum_probs=44.0

Q ss_pred             EEEEeccCCCCEEEEecCC---------CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        241 LAMDIQVEDTSKILTGGND---------CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~D---------GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..++||| |+++|+.++.|         +.+.|||+.++++. .|..|...+..++|+||+++
T Consensus        65 ~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~  125 (740)
T 4a5s_A           65 NDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHK  125 (740)
T ss_dssp             CEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTC
T ss_pred             cceEECC-CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCE
Confidence            4588999 89999999887         45569999999854 57888899999999999874

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=96.02  E-value=0.015  Score=50.00  Aligned_cols=55  Identities=5%  Similarity=0.070  Sum_probs=39.6

Q ss_pred             CCEEEEEeccCCCCEEEEec-CCCcEEEEeCC-Cc--ceEEEecc---------CCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGG-NDCQATVFNKD-TE--QVVAILKG---------HRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG-~DGTVkVWDle-Tg--KvV~TLkG---------HTkkVtSVaFhPd~~  293 (294)
                      ..+..|+|+| ++++|++++ .|++|.+||+. ++  +.+..+..         +...+.+++|+|+++
T Consensus        86 ~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~  153 (347)
T 3hfq_A           86 TPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR  153 (347)
T ss_dssp             CCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred             CCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc
Confidence            3567899999 788777766 78999999996 33  33444432         223588999999975

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=95.96  E-value=0.03  Score=47.74  Aligned_cols=55  Identities=9%  Similarity=0.100  Sum_probs=46.5

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+++|++ ++++++++..++.|.+||..++++...+..+...+.+++|+|+++
T Consensus        45 ~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~   99 (333)
T 2dg1_A           45 LQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR   99 (333)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC
T ss_pred             ccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc
Confidence            4578999998 688888999999999999999887765556678899999999875

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=95.94  E-value=0.016  Score=50.13  Aligned_cols=54  Identities=11%  Similarity=0.106  Sum_probs=41.4

Q ss_pred             CCEEEEEeccCCCCEEEEec-C-CCcEEEEeCC--Ccc--eEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGG-N-DCQATVFNKD--TEQ--VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG-~-DGTVkVWDle--TgK--vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+..+++|+| |+++|+++. . +++|.|||+.  +++  .+..+.. ...+.+++|+|+++
T Consensus       259 ~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~  318 (361)
T 3scy_A          259 QGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGK  318 (361)
T ss_dssp             CCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSC
T ss_pred             CCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCC
Confidence            4578999999 788775544 4 5899999996  455  5666665 56789999999986

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=95.88  E-value=0.0032  Score=59.94  Aligned_cols=55  Identities=5%  Similarity=0.064  Sum_probs=44.1

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCC-----cceEEEeccCCCc--------------EEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDT-----EQVVAILKGHRKK--------------VTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleT-----gKvV~TLkGHTkk--------------VtSVaFhPd~~Q  294 (294)
                      ..+.+++|+| |+++||++ .|++|+|||+.+     ++.......+...              +.++.|+||+++
T Consensus       121 ~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~  194 (706)
T 2z3z_A          121 EETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC  194 (706)
T ss_dssp             TCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE
T ss_pred             ccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE
Confidence            3577889999 79999985 689999999998     8877655555443              489999999863

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=95.87  E-value=0.013  Score=49.94  Aligned_cols=52  Identities=15%  Similarity=0.095  Sum_probs=40.1

Q ss_pred             CEEEEEeccCCCCEEEEecCC---C--cEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGND---C--QATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~D---G--TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+.+++|+| |+++||..+.+   +  .|.+||+.+++.......+ . +.++.|+|+++
T Consensus        60 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~  116 (347)
T 2gop_A           60 NATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSR  116 (347)
T ss_dssp             SCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSS
T ss_pred             cCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCC
Confidence            477899999 79988877654   2  4788899888766655544 3 99999999986

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=95.86  E-value=0.027  Score=49.76  Aligned_cols=55  Identities=15%  Similarity=0.151  Sum_probs=42.4

Q ss_pred             CCEEEEEeccCCCCEEEEec-CCCcEEEEeCC-CcceE--EEec--cCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGG-NDCQATVFNKD-TEQVV--AILK--GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG-~DGTVkVWDle-TgKvV--~TLk--GHTkkVtSVaFhPd~~  293 (294)
                      ..+.+++|+| |+++|+++. .+..|++||+. ++++.  ..+.  .|...+..++|+|+++
T Consensus       145 ~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~  205 (365)
T 1jof_A          145 TGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGN  205 (365)
T ss_dssp             CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSS
T ss_pred             CcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCC
Confidence            4689999999 788777654 46899999998 77653  3454  3456799999999986

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=95.77  E-value=0.0047  Score=60.53  Aligned_cols=53  Identities=11%  Similarity=0.121  Sum_probs=44.0

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcE-----EEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKV-----TRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkV-----tSVaFhPd~~Q  294 (294)
                      ...++.|+| |+.+|+++  |++|++||+.++++...|.+|+..+     .++.|+||+++
T Consensus        18 ~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~   75 (740)
T 4a5s_A           18 KLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQF   75 (740)
T ss_dssp             CCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSE
T ss_pred             cccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCE
Confidence            356789998 78899887  9999999999999988899987542     44788999863

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=95.68  E-value=0.013  Score=55.76  Aligned_cols=53  Identities=8%  Similarity=-0.011  Sum_probs=44.5

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcce--EEEe------c---cCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQV--VAIL------K---GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKv--V~TL------k---GHTkkVtSVaFhPd~~  293 (294)
                      .+|.|++||| ++  ++.|..|+++++|+...+++  .+++      .   +|...|.+|.|.++..
T Consensus       163 ~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~  226 (388)
T 1xip_A          163 QNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD  226 (388)
T ss_dssp             ESEEEEEECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred             CCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe
Confidence            5799999999 46  67888999999999988886  6677      3   5889999999998653

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=95.67  E-value=0.0065  Score=52.60  Aligned_cols=50  Identities=20%  Similarity=0.258  Sum_probs=42.0

Q ss_pred             EEeccCCCCEEEEecC-CCc--EEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        243 MDIQVEDTSKILTGGN-DCQ--ATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       243 LdfSpsDgnlLATGG~-DGT--VkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+|+| |+++|+.++. |++  |.+||+.++++.....+|...+.++.|+|+++
T Consensus        41 ~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~   93 (388)
T 3pe7_A           41 KCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD   93 (388)
T ss_dssp             CCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS
T ss_pred             ccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC
Confidence            67999 7998888877 674  88889999998888888877777889999986

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=95.64  E-value=0.056  Score=47.24  Aligned_cols=56  Identities=4%  Similarity=-0.013  Sum_probs=46.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCC------------------------CcEEEEeCCCcceEEEec-cCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGND------------------------CQATVFNKDTEQVVAILK-GHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~D------------------------GTVkVWDleTgKvV~TLk-GHTkkVtSVaFhPd  291 (294)
                      ...+.+|++++ +++++++...+                        ++|.+||..+++++..+. ++-.....++|+|+
T Consensus        23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~  101 (329)
T 3fvz_A           23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD  101 (329)
T ss_dssp             CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred             cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence            35799999998 68999988877                        479999999999888775 55578999999998


Q ss_pred             CC
Q psy12461        292 EL  293 (294)
Q Consensus       292 ~~  293 (294)
                      ++
T Consensus       102 g~  103 (329)
T 3fvz_A          102 GN  103 (329)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=95.55  E-value=0.015  Score=54.83  Aligned_cols=54  Identities=9%  Similarity=0.092  Sum_probs=43.5

Q ss_pred             CEEEEEeccCCCCEEEEecCC--------CcEEEEeCC-Cc---ceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGND--------CQATVFNKD-TE---QVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~D--------GTVkVWDle-Tg---KvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+.+++|+| |+++|+..+.|        ..|++||+. ++   +......+|...+.++.|+||++
T Consensus       189 ~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~  254 (662)
T 3azo_A          189 FVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS  254 (662)
T ss_dssp             EECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC
T ss_pred             cccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe
Confidence            567789999 79999887755        379999999 57   55555566788999999999975

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=95.46  E-value=0.013  Score=57.04  Aligned_cols=53  Identities=8%  Similarity=0.046  Sum_probs=40.9

Q ss_pred             CEEEEEeccCCCCEEEEecCCC-----cEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDC-----QATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DG-----TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+.+++||| |+++||.+..++     +|+|||+.+++.+.....+ .++.+++|+||++
T Consensus       126 ~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~  183 (710)
T 2xdw_A          126 ALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGK  183 (710)
T ss_dssp             EEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSS
T ss_pred             EEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCC
Confidence            377899999 799988765443     8999999999987643333 2378899999986

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=95.37  E-value=0.01  Score=56.09  Aligned_cols=54  Identities=13%  Similarity=0.027  Sum_probs=44.5

Q ss_pred             CEEEEEeccCCCCEEEEecCC----------CcEEEEeCCC------cceEEEec-cCCCcEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGND----------CQATVFNKDT------EQVVAILK-GHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~D----------GTVkVWDleT------gKvV~TLk-GHTkkVtSVaFhPd~~Q  294 (294)
                      .+.+++|+| |++.|++++.|          .+|++||+.+      +++ ..|. .+...+.+++|+||+++
T Consensus       131 ~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~  201 (662)
T 3azo_A          131 RWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQ  201 (662)
T ss_dssp             EEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSE
T ss_pred             cccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCE
Confidence            478999999 79999988877          6899999988      654 4555 66688999999999873

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=95.26  E-value=0.054  Score=45.33  Aligned_cols=54  Identities=19%  Similarity=0.261  Sum_probs=46.7

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ....+++++ +++++++...++.|.+||..+++.+..+..+...+.+++|+|+++
T Consensus       227 ~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~  280 (314)
T 1pjx_A          227 GADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTK  280 (314)
T ss_dssp             EEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSS
T ss_pred             CCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCC
Confidence            467899998 688888877789999999998888888888888999999999875

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=95.06  E-value=0.054  Score=46.64  Aligned_cols=54  Identities=13%  Similarity=-0.021  Sum_probs=46.3

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEEC-CCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYH-PSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFh-Pd~~  293 (294)
                      ....+++++ ++++.++...++.|.+||.++++++.++..+...+++++|. |+.+
T Consensus       200 ~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~  254 (297)
T 3g4e_A          200 IPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYS  254 (297)
T ss_dssp             EEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGC
T ss_pred             CCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCC
Confidence            367888987 68888888778899999999999999999988899999998 6643

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=95.02  E-value=0.031  Score=50.26  Aligned_cols=48  Identities=13%  Similarity=0.159  Sum_probs=38.3

Q ss_pred             EEeccCCCCEEEEe-c----------CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        243 MDIQVEDTSKILTG-G----------NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       243 LdfSpsDgnlLATG-G----------~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ++|+| +++.+..+ +          .+.+|.+||..+++++.++..|.  +.+++|+|+++
T Consensus       259 ~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~  317 (361)
T 2oiz_A          259 VGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRN  317 (361)
T ss_dssp             EEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTT
T ss_pred             EEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCC
Confidence            57888 55554433 2          13589999999999999999987  99999999986

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=94.86  E-value=0.02  Score=55.68  Aligned_cols=52  Identities=10%  Similarity=0.113  Sum_probs=40.0

Q ss_pred             CEEEEEeccCCCCEEE-----EecCCCcEEEEeCCCcceEEEeccCCCcE--EEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKIL-----TGGNDCQATVFNKDTEQVVAILKGHRKKV--TRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLA-----TGG~DGTVkVWDleTgKvV~TLkGHTkkV--tSVaFhPd~~  293 (294)
                      .+.+++||| |+++||     +|+.+.+|+|||+.+++.+.  ..+...+  .+++|+||++
T Consensus       122 ~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~  180 (695)
T 2bkl_A          122 SLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSK  180 (695)
T ss_dssp             EEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSS
T ss_pred             EEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCC
Confidence            478899999 799998     66667899999999998751  1122223  7899999986

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=94.81  E-value=0.028  Score=47.91  Aligned_cols=50  Identities=18%  Similarity=0.381  Sum_probs=40.1

Q ss_pred             EEEEEeccCCCCEEEEecCC---------------------------CcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGND---------------------------CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~D---------------------------GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      +.+++|+| |++.|+.++.+                           ..|.+||+.+++.+..|.. . .+.++.|+|++
T Consensus       106 ~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg  182 (347)
T 2gop_A          106 IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK  182 (347)
T ss_dssp             EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE
T ss_pred             ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe
Confidence            88999999 78888877632                           6799999999887566665 4 88899999975

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=94.65  E-value=0.055  Score=52.58  Aligned_cols=53  Identities=11%  Similarity=-0.054  Sum_probs=44.5

Q ss_pred             EEEEeccCCCCEEEEecCCCc-------------EEEEeCCCcc----eEEEeccCCCcEEEEEECCCCCC
Q psy12461        241 LAMDIQVEDTSKILTGGNDCQ-------------ATVFNKDTEQ----VVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~DGT-------------VkVWDleTgK----vV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .+++|+| |++.|+.++.|.+             |++|++.+++    ++....+|...+.++.|+||+++
T Consensus       171 ~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~  240 (695)
T 2bkl_A          171 ATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY  240 (695)
T ss_dssp             CCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC
T ss_pred             cceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE
Confidence            4688998 7999999988887             9999999876    55566677788999999999874

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=94.50  E-value=0.08  Score=44.73  Aligned_cols=52  Identities=6%  Similarity=-0.092  Sum_probs=44.8

Q ss_pred             CEEEEEeccCCCC-EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...+++|+| +++ +++++..++.|.+||..++  +..+..+...+.+++|+|+++
T Consensus        29 ~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~   81 (296)
T 3e5z_A           29 WTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGH   81 (296)
T ss_dssp             SEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCC
T ss_pred             cccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCc
Confidence            467899998 577 8889999999999999988  677777888999999999874

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=94.36  E-value=0.037  Score=48.86  Aligned_cols=52  Identities=19%  Similarity=0.261  Sum_probs=39.2

Q ss_pred             EEEEeccCCCC--EEEEec-------------CCCcEEEEeCC-CcceEEEec----cCCCcEEEEEECCCCC
Q psy12461        241 LAMDIQVEDTS--KILTGG-------------NDCQATVFNKD-TEQVVAILK----GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       241 lSLdfSpsDgn--lLATGG-------------~DGTVkVWDle-TgKvV~TLk----GHTkkVtSVaFhPd~~  293 (294)
                      .+++|+| +++  +++++.             .|+++.+|++. ++++...+.    .+...+.+++|+|+++
T Consensus        86 ~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~  157 (365)
T 1jof_A           86 RANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET  157 (365)
T ss_dssp             GGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred             ccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC
Confidence            3477888 687  455664             69999999997 577655554    2567899999999986

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=94.24  E-value=0.13  Score=42.88  Aligned_cols=54  Identities=13%  Similarity=0.220  Sum_probs=42.8

Q ss_pred             CCEEEEEeccCCCCEEEEecCCC-cEEEEeCCCcceEEEeccCCC--cEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDC-QATVFNKDTEQVVAILKGHRK--KVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DG-TVkVWDleTgKvV~TLkGHTk--kVtSVaFhPd~~  293 (294)
                      ..+..|++++ +++++++...++ .|.+||. +++.+.++..+..  .+.+++|+|+++
T Consensus       207 ~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~  263 (286)
T 1q7f_A          207 NYPIGVGINS-NGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGS  263 (286)
T ss_dssp             CSEEEEEECT-TCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTE
T ss_pred             CCCcEEEECC-CCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCc
Confidence            4578999998 688888887776 9999995 5777888876643  478999999863

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=94.17  E-value=0.097  Score=45.19  Aligned_cols=52  Identities=6%  Similarity=-0.063  Sum_probs=41.3

Q ss_pred             EEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEE--CCCCC
Q psy12461        241 LAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVY--HPSEL  293 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaF--hPd~~  293 (294)
                      .++.|+| |++.|+.++.|+.+++||+.+++....+..+...+....|  +|+++
T Consensus        84 ~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~  137 (388)
T 3pe7_A           84 FGGFLSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCT  137 (388)
T ss_dssp             SSCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred             cceEEcC-CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCC
Confidence            3567999 7999999999999999999999887777777666655544  67654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=94.00  E-value=0.16  Score=44.33  Aligned_cols=52  Identities=15%  Similarity=0.226  Sum_probs=44.5

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec--cCCCcEEEEEECC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK--GHRKKVTRVVYHP  290 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk--GHTkkVtSVaFhP  290 (294)
                      ....|+++|..+.++++...++.|++||..+++++.++.  ++...+.+++|+|
T Consensus       197 ~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p  250 (329)
T 3fvz_A          197 VPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP  250 (329)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred             CCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence            368899998337888999999999999999999999884  5667899999998

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=93.97  E-value=0.078  Score=51.52  Aligned_cols=54  Identities=13%  Similarity=-0.009  Sum_probs=43.0

Q ss_pred             EEEEEeccCCCCEEEEecCCCc----------------EEEEeCCCcc----eEEEeccCCCcEEEEEECCCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQ----------------ATVFNKDTEQ----VVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGT----------------VkVWDleTgK----vV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      +.+++|+| |++.|+.++.|+.                |++|++.+++    ++.....|...+.++.|+||+++
T Consensus       173 ~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~  246 (710)
T 2xdw_A          173 FSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY  246 (710)
T ss_dssp             SCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred             cceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCE
Confidence            45689999 7999998888876                9999998876    34444556677899999999863

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=93.75  E-value=0.26  Score=41.93  Aligned_cols=55  Identities=11%  Similarity=0.095  Sum_probs=43.1

Q ss_pred             CCEEEEEeccCCCCEEEEecCC----CcEEEEeCCCcceEEEec--cCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGND----CQATVFNKDTEQVVAILK--GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~D----GTVkVWDleTgKvV~TLk--GHTkkVtSVaFhPd~~  293 (294)
                      ..+.++++++ +++++++...+    +.|.+||..++++...+.  .+...+++++|+|+++
T Consensus        87 ~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~  147 (333)
T 2dg1_A           87 ANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG  147 (333)
T ss_dssp             SSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC
T ss_pred             CCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC
Confidence            4689999998 68888877666    789999999887654443  3456799999999864

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=93.60  E-value=0.24  Score=41.27  Aligned_cols=54  Identities=11%  Similarity=0.027  Sum_probs=43.7

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccC--CCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH--RKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGH--TkkVtSVaFhPd~~  293 (294)
                      ..+.+|++++ +++++++...++.|++||. +++.+.++..+  ...+.+++++|+++
T Consensus       164 ~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~  219 (286)
T 1q7f_A          164 EFPNGVVVND-KQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGE  219 (286)
T ss_dssp             SSEEEEEECS-SSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCC
T ss_pred             CCcEEEEECC-CCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCC
Confidence            3578999998 6888888888999999998 56677777544  46789999999864

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=93.46  E-value=0.1  Score=49.59  Aligned_cols=47  Identities=9%  Similarity=0.057  Sum_probs=37.9

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      .|.++.+.+  ++ +|++..||++.+||+.+++...    +...|+|++|+|++
T Consensus       128 ~v~~i~~~~--p~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG  174 (388)
T 1xip_A          128 PVFQLKNVN--NT-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ  174 (388)
T ss_dssp             CEEEEEECS--SE-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE
T ss_pred             ceeeEEecC--CC-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc
Confidence            477777664  23 8888999999999999888754    44689999999986

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=92.87  E-value=0.16  Score=42.79  Aligned_cols=49  Identities=6%  Similarity=0.079  Sum_probs=40.1

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEE-CCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVY-HPSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaF-hPd~~  293 (294)
                      +.++++++ +++++++.  ++.|.+||.+ ++.+..+..+.. +++++| .|+++
T Consensus       220 p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~  269 (296)
T 3e5z_A          220 TDGLRVDA-GGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGR  269 (296)
T ss_dssp             CCSEEEBT-TSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSC
T ss_pred             CCeEEECC-CCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCC
Confidence            45688998 68877766  8899999996 888889988877 999999 57654

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=92.84  E-value=0.12  Score=44.39  Aligned_cols=42  Identities=12%  Similarity=-0.039  Sum_probs=33.7

Q ss_pred             EEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEE
Q psy12461        243 MDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTR  285 (294)
Q Consensus       243 LdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtS  285 (294)
                      +.|+| |+++|+..+.++.+++||+.+++....+..+......
T Consensus        86 ~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~  127 (396)
T 3c5m_A           86 GFIST-DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGY  127 (396)
T ss_dssp             CEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEE
T ss_pred             ceECC-CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCC
Confidence            57898 7999999999999999999998877666656554444

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=92.23  E-value=0.32  Score=47.81  Aligned_cols=54  Identities=9%  Similarity=0.036  Sum_probs=45.2

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCC--CcceEEEeccCCCcEEEEEEC----CCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKD--TEQVVAILKGHRKKVTRVVYH----PSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDle--TgKvV~TLkGHTkkVtSVaFh----Pd~~Q  294 (294)
                      .+..+.|+| |++++.+++.|+.|.+||+.  +.+++.++..... ...++|+    |++++
T Consensus       198 ~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~  257 (567)
T 1qks_A          198 AVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKY  257 (567)
T ss_dssp             CEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTE
T ss_pred             CccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCE
Confidence            456899999 79999999999999999996  8899999886543 5789999    68763

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=92.17  E-value=0.07  Score=45.76  Aligned_cols=53  Identities=19%  Similarity=0.231  Sum_probs=36.8

Q ss_pred             EEEEEeccCCCCEEEEecC---CCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGN---DCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~---DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +.+++|+| |+++|+....   +..+.+||+.+++......++...+..+.|+|+++
T Consensus        38 ~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~   93 (396)
T 3c5m_A           38 FYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER   93 (396)
T ss_dssp             TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred             eecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC
Confidence            56678999 7888776643   34788889998886554444433334488999986

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=91.98  E-value=0.087  Score=51.71  Aligned_cols=51  Identities=10%  Similarity=-0.013  Sum_probs=37.9

Q ss_pred             CEEEEEeccCCCCEEEEecCC-----CcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        239 GILAMDIQVEDTSKILTGGND-----CQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~D-----GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .+.+++||| |+++||.+..+     .+|+|||+.+++.+.. ..+..++.+++|+||
T Consensus       164 ~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD  219 (741)
T 1yr2_A          164 ALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN  219 (741)
T ss_dssp             EEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT
T ss_pred             EEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC
Confidence            467899999 79998876544     5799999999987653 222233468899998

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=91.68  E-value=0.71  Score=37.69  Aligned_cols=55  Identities=7%  Similarity=-0.017  Sum_probs=42.6

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+|++++ ++.++++...++.|.+||............+-..+.+++|.|+++
T Consensus       192 ~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~  246 (270)
T 1rwi_B          192 TAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT  246 (270)
T ss_dssp             CSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC
T ss_pred             CCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC
Confidence            4578999998 578888888899999999977655443334446789999999864

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=90.01  E-value=0.58  Score=38.99  Aligned_cols=52  Identities=12%  Similarity=0.026  Sum_probs=40.5

Q ss_pred             CEEEEEeccCCCCEEEE-------ecCCCcEEEEeCCCcceEEEec----cCCCcEEEEEECCC
Q psy12461        239 GILAMDIQVEDTSKILT-------GGNDCQATVFNKDTEQVVAILK----GHRKKVTRVVYHPS  291 (294)
Q Consensus       239 GIlSLdfSpsDgnlLAT-------GG~DGTVkVWDleTgKvV~TLk----GHTkkVtSVaFhPd  291 (294)
                      ...+++|++ ++.++++       +..++.|.+||..++++.....    ++...+.+++|+++
T Consensus        19 ~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~   81 (314)
T 1pjx_A           19 GAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD   81 (314)
T ss_dssp             TCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS
T ss_pred             CccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC
Confidence            457899997 6888888       6778999999998888654322    35577999999988

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=89.87  E-value=0.99  Score=39.53  Aligned_cols=52  Identities=8%  Similarity=0.003  Sum_probs=42.3

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEEC-CCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYH-PSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFh-Pd~~  293 (294)
                      ...+++++ ++++.++...++.|.+||. +++.+..+..+...+++++|. |+++
T Consensus       232 p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~  284 (326)
T 2ghs_A          232 MDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDAS  284 (326)
T ss_dssp             EEEEEECT-TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSC
T ss_pred             CCeeEECC-CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCC
Confidence            56788887 6887777666788999999 688888888888889999998 7653

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=88.43  E-value=0.93  Score=36.98  Aligned_cols=53  Identities=4%  Similarity=0.008  Sum_probs=41.7

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      .+.+|++++ +++++++...++.|.+||..+.........+...+.++++.+++
T Consensus       151 ~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g  203 (270)
T 1rwi_B          151 DPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG  203 (270)
T ss_dssp             SCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC
T ss_pred             CceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCC
Confidence            456788998 67888888888999999998877655444555778999999876

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=88.35  E-value=0.25  Score=48.39  Aligned_cols=51  Identities=12%  Similarity=0.205  Sum_probs=36.8

Q ss_pred             CEEEEEeccCCCCEEE-----EecCCCcEEEEeCCCcceEEE-eccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKIL-----TGGNDCQATVFNKDTEQVVAI-LKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLA-----TGG~DGTVkVWDleTgKvV~T-LkGHTkkVtSVaFhPd~~  293 (294)
                      .+..++||| |+++||     .|+.+.+|+|||+.+++.+.. +.+  .+..+++|+ |++
T Consensus       130 ~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~  186 (693)
T 3iuj_A          130 ALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNE  186 (693)
T ss_dssp             EEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTT
T ss_pred             EEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCC
Confidence            477889999 799888     455557999999999986653 322  123567888 765

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=88.26  E-value=0.84  Score=40.00  Aligned_cols=52  Identities=8%  Similarity=-0.093  Sum_probs=40.6

Q ss_pred             EEEEeccCCCCEEEEecCC----------CcEEEEeCCCcceEEEeccC-CCcEEEEEECCCCC
Q psy12461        241 LAMDIQVEDTSKILTGGND----------CQATVFNKDTEQVVAILKGH-RKKVTRVVYHPSEL  293 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~D----------GTVkVWDleTgKvV~TLkGH-TkkVtSVaFhPd~~  293 (294)
                      ..+.+++ ++++++++..+          +.|.+||..+++++.++.-. ....+.++|+|+++
T Consensus       175 ~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~  237 (328)
T 3dsm_A          175 TSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD  237 (328)
T ss_dssp             CCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC
T ss_pred             cceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC
Confidence            4677887 67877776655          79999999999988887643 24789999999875

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=87.68  E-value=1.3  Score=38.99  Aligned_cols=41  Identities=7%  Similarity=0.097  Sum_probs=31.5

Q ss_pred             CEEEEEeccCCCCEEEEec---CCCcEEEEeCCCcceEEEeccC
Q psy12461        239 GILAMDIQVEDTSKILTGG---NDCQATVFNKDTEQVVAILKGH  279 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG---~DGTVkVWDleTgKvV~TLkGH  279 (294)
                      .++.+++++.++.+.++-.   .++.|.+||+.+++..+.+.+|
T Consensus       121 ~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~  164 (343)
T 2qe8_A          121 FVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGY  164 (343)
T ss_dssp             CCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTC
T ss_pred             ccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCC
Confidence            4678899873355556655   6899999999999988888765

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=87.03  E-value=1.2  Score=40.80  Aligned_cols=52  Identities=12%  Similarity=-0.068  Sum_probs=39.1

Q ss_pred             EEEeccCCCCEEEEec----------CCCcEEEEeCCCcceEEEeccC-------CCcEEEEEECCCCCC
Q psy12461        242 AMDIQVEDTSKILTGG----------NDCQATVFNKDTEQVVAILKGH-------RKKVTRVVYHPSELQ  294 (294)
Q Consensus       242 SLdfSpsDgnlLATGG----------~DGTVkVWDleTgKvV~TLkGH-------TkkVtSVaFhPd~~Q  294 (294)
                      .++|+| |++++..+.          .+++|.+||..+.+++.++.--       ...-..+.|+||+++
T Consensus        70 ~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~  138 (373)
T 2mad_H           70 NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD  138 (373)
T ss_pred             CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCE
Confidence            788999 788777664          4788999999999988877532       123357899999874

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=86.99  E-value=1.3  Score=38.48  Aligned_cols=51  Identities=4%  Similarity=-0.020  Sum_probs=41.8

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCC-CcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHR-KKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHT-kkVtSVaFhPd~~  293 (294)
                      .+.++++.| +++++++  .++.|+.||. +++++-+++.+. ..+.++.+.|+++
T Consensus        38 ~~~~~~~~p-dG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~   89 (276)
T 3no2_A           38 ECNSVAATK-AGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN   89 (276)
T ss_dssp             CCCEEEECT-TSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC
T ss_pred             CCcCeEECC-CCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC
Confidence            578889998 6898884  4788999999 899999998753 4788888888764

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=86.64  E-value=3.4  Score=33.67  Aligned_cols=54  Identities=4%  Similarity=-0.034  Sum_probs=41.7

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-EeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-ILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.++++++ ++++.++...++.|.+||. +++... .+..+...+.++++.++++
T Consensus       183 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~  237 (299)
T 2z2n_A          183 SGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGID  237 (299)
T ss_dssp             CCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred             CcceeEEECC-CCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCC
Confidence            3578999998 6888888777899999999 776543 2455567899999998764

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=86.62  E-value=0.42  Score=44.69  Aligned_cols=52  Identities=13%  Similarity=-0.052  Sum_probs=40.3

Q ss_pred             EEEeccCCCCEEEEec----------CCCcEEEEeCCCcceEEEeccCC-------CcEEEEEECCCCCC
Q psy12461        242 AMDIQVEDTSKILTGG----------NDCQATVFNKDTEQVVAILKGHR-------KKVTRVVYHPSELQ  294 (294)
Q Consensus       242 SLdfSpsDgnlLATGG----------~DGTVkVWDleTgKvV~TLkGHT-------kkVtSVaFhPd~~Q  294 (294)
                      .+.|+| |+.++..+.          .+++|.+||..+++++.++..+.       ..-..++|+||+++
T Consensus        69 ~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~  137 (368)
T 1mda_H           69 LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC  137 (368)
T ss_dssp             EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC
T ss_pred             ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCE
Confidence            589998 677666654          47899999999999999986441       23567899999864

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=86.07  E-value=1.1  Score=43.93  Aligned_cols=52  Identities=10%  Similarity=-0.107  Sum_probs=38.7

Q ss_pred             EEEEeccCCCCEEEEecCCCc--------------EEEEeCCCcc----eEEEeccCCCcEEEEEECCCCCC
Q psy12461        241 LAMDIQVEDTSKILTGGNDCQ--------------ATVFNKDTEQ----VVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       241 lSLdfSpsDgnlLATGG~DGT--------------VkVWDleTgK----vV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .+++|+| | +.|+.++.|..              |++|++.+++    ++.....|...+.++.|+||+++
T Consensus       212 ~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~  281 (741)
T 1yr2_A          212 SGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRW  281 (741)
T ss_dssp             CCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred             ccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCE
Confidence            4678998 7 77877777655              8999998765    44444455557999999999863

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=85.63  E-value=4  Score=33.22  Aligned_cols=54  Identities=13%  Similarity=0.100  Sum_probs=41.6

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-EeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-ILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+|++++ +++++++...++.|.+||.. ++... .+..+...+.++++.++++
T Consensus        15 ~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~   69 (299)
T 2z2n_A           15 TGPYGITVSD-KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE   69 (299)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC
T ss_pred             CCccceEECC-CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC
Confidence            4689999998 68888877778999999998 66443 2334557899999988764

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=84.56  E-value=2.6  Score=38.85  Aligned_cols=53  Identities=9%  Similarity=0.098  Sum_probs=40.8

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .....|+|++ +++++++...++.|++||..++++...+... .... ++|+|+++
T Consensus       131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~  183 (409)
T 3hrp_A          131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQ  183 (409)
T ss_dssp             CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSS
T ss_pred             CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCC
Confidence            4578899998 6888888888899999999988876665553 3333 88888764

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=83.88  E-value=1.9  Score=40.15  Aligned_cols=51  Identities=8%  Similarity=0.016  Sum_probs=39.9

Q ss_pred             CEEEEEeccCCCC-EEEEec-CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        239 GILAMDIQVEDTS-KILTGG-NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       239 GIlSLdfSpsDgn-lLATGG-~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ....|+|+| |++ ++++.. .+++|.|+|..+++++.+++.+ +.-..+++++.
T Consensus       315 ~p~gi~~s~-Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg-~~P~~i~~~~~  367 (368)
T 1mda_H          315 DSDAIIAAQ-DGASDNYANSAGTEVLDIYDAASDQDQSSVELD-KGPESLSVQNE  367 (368)
T ss_dssp             EECEEEECC-SSSCEEEEEETTTTEEEEEESSSCEEEEECCCC-SCCCEEECCCC
T ss_pred             CcceEEECC-CCCEEEEEccCCCCeEEEEECCCCcEEEEEECC-CCCCEEEeecC
Confidence            367899998 666 566776 6999999999999999999976 34556666653

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=82.69  E-value=1.4  Score=41.97  Aligned_cols=51  Identities=8%  Similarity=0.121  Sum_probs=37.5

Q ss_pred             CEEEEEeccCCCC-EE-EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        239 GILAMDIQVEDTS-KI-LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       239 GIlSLdfSpsDgn-lL-ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .+.+|+|++ |++ +| ++.+.+++|.|||..+++++++++.- ..-+.+.+++|
T Consensus       332 ~~~~lavs~-D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d  384 (386)
T 3sjl_D          332 EIDSINVSQ-DEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD  384 (386)
T ss_dssp             EECEEEECS-SSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred             CcceEEECC-CCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence            467899998 665 44 55677999999999999999998743 22345555555

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=82.47  E-value=3.6  Score=37.52  Aligned_cols=54  Identities=9%  Similarity=-0.064  Sum_probs=40.3

Q ss_pred             CCEEEEEeccCCCCEEEEec----------CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGG----------NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG----------~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+...+.+++ +++.+....          .++.|.|+|..+++++.++... ....+++|+||++
T Consensus       267 ~g~~~~~~s~-d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~  330 (373)
T 2mad_H          267 GGWQQVAYLK-SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGG  330 (373)
T ss_pred             CceEeEEECC-CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCCC
Confidence            3455678888 566544432          2468999999999999999753 3689999999986

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=82.32  E-value=3.5  Score=35.16  Aligned_cols=52  Identities=13%  Similarity=-0.031  Sum_probs=40.1

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .-+..|++.++.++++...++.|..||..+++. ..+. ....+.+++|+|+++
T Consensus        15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~   66 (297)
T 3g4e_A           15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGG   66 (297)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSS
T ss_pred             ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCC
Confidence            347788885567888888899999999998875 3333 346799999999875

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=81.97  E-value=1.2  Score=44.36  Aligned_cols=46  Identities=15%  Similarity=0.164  Sum_probs=35.0

Q ss_pred             CCCEEEEecCCCcEEEEeCCCcceEEEeccCCCc-EEEEEECCCCCC
Q psy12461        249 DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKK-VTRVVYHPSELQ  294 (294)
Q Consensus       249 DgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkk-VtSVaFhPd~~Q  294 (294)
                      .+.+|++|+.|+.+++||.+||+++-+++....- .+-+.|..+++|
T Consensus       485 agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~q  531 (689)
T 1yiq_A          485 AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQ  531 (689)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEE
Confidence            3679999999999999999999999988754322 234556666654

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=81.55  E-value=3.6  Score=36.12  Aligned_cols=52  Identities=6%  Similarity=0.008  Sum_probs=39.1

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc-CCCcEEEEEECCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG-HRKKVTRVVYHPSE  292 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG-HTkkVtSVaFhPd~  292 (294)
                      ...+++++ +++++++...++.|.+||..+++....... +-..+++++|.+++
T Consensus       250 pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g  302 (343)
T 2qe8_A          250 CDGISIDK-DHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG  302 (343)
T ss_dssp             CSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS
T ss_pred             CceEEECC-CCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC
Confidence            34578887 689999999999999999966764333322 24678999999875

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=81.35  E-value=2.7  Score=36.45  Aligned_cols=48  Identities=4%  Similarity=-0.046  Sum_probs=37.8

Q ss_pred             EEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        243 MDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       243 LdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +++.+ +++++++...++.|.+||.+ |+.+-++..+ ..+.++.+.++++
T Consensus       130 v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~  177 (276)
T 3no2_A          130 INKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGD  177 (276)
T ss_dssp             CEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSC
T ss_pred             ceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCC
Confidence            34566 68999999999999999998 9999999875 3455666666553

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=81.18  E-value=7.8  Score=31.50  Aligned_cols=54  Identities=9%  Similarity=0.070  Sum_probs=41.5

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-EeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-ILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+|++++ +++++++...++.|.+||.. +++.. .+..+...+.++++.++++
T Consensus        20 ~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~   74 (300)
T 2qc5_A           20 SGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD   74 (300)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC
T ss_pred             CCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC
Confidence            4678999998 68888888788999999998 66544 3444456788999988764

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=80.95  E-value=4  Score=34.87  Aligned_cols=51  Identities=4%  Similarity=-0.121  Sum_probs=40.0

Q ss_pred             EEEEEeccCCCC-EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        240 ILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .-...|++ +++ +++++..++.|..||. +++ +..+..+...++.++|+++++
T Consensus        47 ~egp~~~~-~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~   98 (305)
T 3dr2_A           47 SEGPAWWE-AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQR   98 (305)
T ss_dssp             EEEEEEEG-GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSC
T ss_pred             ccCCeEeC-CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCC
Confidence            46788988 566 7788888999999998 455 455666677899999999875

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=80.33  E-value=0.9  Score=43.22  Aligned_cols=50  Identities=16%  Similarity=-0.043  Sum_probs=38.0

Q ss_pred             EEeccCCCCEEEEec----------CCCcEEEEeCCCcceEEEeccCC-------CcEEEEEECCCCC
Q psy12461        243 MDIQVEDTSKILTGG----------NDCQATVFNKDTEQVVAILKGHR-------KKVTRVVYHPSEL  293 (294)
Q Consensus       243 LdfSpsDgnlLATGG----------~DGTVkVWDleTgKvV~TLkGHT-------kkVtSVaFhPd~~  293 (294)
                      ++++| |++++..+.          .+++|.+||..+.+++.++.-..       ..-..++|+||++
T Consensus        83 va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk  149 (386)
T 3sjl_D           83 PVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK  149 (386)
T ss_dssp             EEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS
T ss_pred             EEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC
Confidence            89999 788665543          46889999999999999885321       2345688999886

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=80.13  E-value=3.8  Score=35.78  Aligned_cols=51  Identities=14%  Similarity=0.046  Sum_probs=40.5

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ....++++.  +.+.++...+++|.+||..+++++.++.. ......++|++++
T Consensus        45 ~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g   95 (328)
T 3dsm_A           45 VAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE   95 (328)
T ss_dssp             CEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT
T ss_pred             cceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC
Confidence            356777763  56777777889999999999999999964 3678889987765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	294
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-05
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-04
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-04
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.001
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	0.001
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	0.001

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 2e-05
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 233 HSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP 290
            S +  G+  +     D  KI++G  D    +++K+T +   IL GH   V  + Y  
Sbjct: 11  RSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.5 bits (93), Expect = 2e-04
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 249 DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
               +L G +D    V++        +L GH  +V+ +     
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD 323

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.9 bits (91), Expect = 2e-04
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 233 HSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
           H  SV   L  +      + ++TG +D    V++   ++ +  L GH   V  + Y   
Sbjct: 11  HMTSVITCLQFE-----DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (90), Expect = 3e-04
 Identities = 9/43 (20%), Positives = 19/43 (44%)

Query: 249 DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
               IL+  +D    V++   ++ +  L  H   VT + +H +
Sbjct: 258 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT 300

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.9 bits (86), Expect = 0.001
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 233 HSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHP 290
           HS  V  I       +D ++I    N+ +  ++ K   +   V  LK H  +VT V + P
Sbjct: 3   HSFLVEPISCHAWN-KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP 61

Query: 291 S 291
            
Sbjct: 62  D 62

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (86), Expect = 0.001
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 5/59 (8%)

Query: 233 HSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
           H   V   L         ++I++G +D    V++  T + +  L GH   V       +
Sbjct: 15  HDDHVITCLQFC-----GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 68

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.5 bits (85), Expect = 0.001
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 249 DTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS 291
           +   IL+G  D     ++K +   + +L+GHR  V  V     
Sbjct: 319 NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG 361

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	294
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.22
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.21
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.08
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.05
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.01
d1tbga_	340	beta1-subunit of the signal-transducing G protein	98.98
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	98.97
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	98.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	98.95
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	98.93
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	98.83
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	98.81
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	98.76
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	98.64
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	98.62
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	98.61
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	98.56
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	98.56
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	98.51
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	98.5
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	98.46
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	98.46
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	98.45
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	98.36
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	98.35
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	98.18
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	98.14
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.01
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	97.96
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	97.83
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	97.8
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	97.62
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	97.53
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	97.51
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	97.5
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	97.49
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	97.46
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	97.33
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	97.26
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	97.2
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	97.12
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	97.03
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	96.99
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	96.76
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	96.2
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	95.93
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	95.57
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	94.99
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	93.05
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	91.2
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	90.33
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	89.43
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	86.04
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	82.32
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	82.16

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.22  E-value=4.3e-11  Score=96.97  Aligned_cols=56  Identities=20%  Similarity=0.259  Sum_probs=53.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+| ++++||||+.||+|+|||+.+++.+.++++|..+|++++|+|+++
T Consensus        55 ~~~I~~l~~s~-~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~  110 (340)
T d1tbga_          55 LAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN  110 (340)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSS
T ss_pred             CCCEEEEEECC-CCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccce
Confidence            56799999999 799999999999999999999999999999999999999999875

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=1.9e-11  Score=96.74  Aligned_cols=56  Identities=18%  Similarity=0.253  Sum_probs=52.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+| ++++|||||.|++|+|||+.+++++.+|++|+..|++++|+|++.
T Consensus        17 ~~~I~~l~~sp-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~   72 (317)
T d1vyhc1          17 RSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK   72 (317)
T ss_dssp             SSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS
T ss_pred             CCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccc
Confidence            56799999999 689999999999999999999999999999999999999999864

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.5e-10  Score=90.66  Aligned_cols=55  Identities=25%  Similarity=0.443  Sum_probs=49.5

Q ss_pred             cCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        233 HSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       233 HSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      |+.+..+|+|++|+   +++||||+.|++|+|||+.+++++++|++|+..|++++|++
T Consensus        11 ~~~~~~~V~c~~~d---~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~~   65 (293)
T d1p22a2          11 RSETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE   65 (293)
T ss_dssp             CCSSCCCEEEEECC---SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCS
T ss_pred             cCCCCCCEEEEEEc---CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeeccc
Confidence            45556799998874   68999999999999999999999999999999999999965

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.05  E-value=2.6e-10  Score=93.14  Aligned_cols=56  Identities=11%  Similarity=0.125  Sum_probs=51.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-cCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-GHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+| ++++|+||+.|++|+|||+++++++.++. +|...|++++|+|+++
T Consensus        12 ~~~V~~l~~s~-dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~   68 (299)
T d1nr0a2          12 NKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD   68 (299)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC
T ss_pred             CCCcEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce
Confidence            56799999999 79999999999999999999999999884 7999999999999864

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=3.2e-10  Score=89.49  Aligned_cols=57  Identities=16%  Similarity=0.188  Sum_probs=53.2

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+.+++++.+|++|+.+|++++|+|++++
T Consensus       247 ~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~  303 (317)
T d1vyhc1         247 DNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY  303 (317)
T ss_dssp             SSCEEEEEECS-SSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSC
T ss_pred             CCCEEEEEECC-CCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence            45799999999 6899999999999999999999999999999999999999998763

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.98  E-value=8.9e-10  Score=89.08  Aligned_cols=57  Identities=18%  Similarity=0.324  Sum_probs=53.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ..+|.+++|+| ++++|++|+.|++|+|||+.+++++.+|++|..+|++|+|+|++++
T Consensus       270 ~~~i~~~~~s~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~  326 (340)
T d1tbga_         270 ICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA  326 (340)
T ss_dssp             CSCEEEEEECS-SSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred             cCceEEEEECC-CCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCE
Confidence            46799999998 6899999999999999999999999999999999999999998753

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.97  E-value=2.8e-10  Score=98.19  Aligned_cols=61  Identities=26%  Similarity=0.302  Sum_probs=55.0

Q ss_pred             CcCCCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEEEeccCCCcEEEEEECCCCC
Q psy12461        232 LHSASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       232 lHSas~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +|+.....|+|++|+| ++++||+|+.|++|+|||+++++  .+.+|++|..+|++++|+|+++
T Consensus         2 ~~~~~~~pIt~~~~s~-dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~   64 (371)
T d1k8kc_           2 YHSFLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN   64 (371)
T ss_dssp             EEESCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTT
T ss_pred             cCCCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCC
Confidence            5666677899999999 79999999999999999998775  6788999999999999999875

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.96  E-value=7.1e-10  Score=89.24  Aligned_cols=50  Identities=20%  Similarity=0.362  Sum_probs=46.2

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      |+|++|+   +++||||+.|++|+|||+.+++++.+|++|+++|++++|+|++
T Consensus        16 itc~~~~---~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~   65 (355)
T d1nexb2          16 ITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG   65 (355)
T ss_dssp             EEEEEEE---TTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTT
T ss_pred             EEEEEEC---CCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCCC
Confidence            6788876   5799999999999999999999999999999999999999864

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.95  E-value=4.2e-10  Score=89.43  Aligned_cols=57  Identities=16%  Similarity=0.067  Sum_probs=47.8

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcce---EEEeccCCCcEEEEEECCCC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQV---VAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKv---V~TLkGHTkkVtSVaFhPd~  292 (294)
                      ++..+|++|+|+| ++++||||+.|++|+|||+++++.   +....+|..+|++++|+|++
T Consensus         9 ~h~d~I~~l~fsp-~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~   68 (342)
T d1yfqa_           9 APKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT   68 (342)
T ss_dssp             CCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS
T ss_pred             CCCCCEEEEEEeC-CCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCC
Confidence            4467899999999 799999999999999999976543   33344799999999999864

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=8e-10  Score=88.46  Aligned_cols=52  Identities=17%  Similarity=0.252  Sum_probs=45.5

Q ss_pred             CCCE-EEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGI-LAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGI-lSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...| .|++++   +++|||||.|++|+|||+.+++++++|++|+..|+++.|+|+
T Consensus        16 ~~~V~s~~~~~---g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~   68 (342)
T d2ovrb2          16 DDHVITCLQFC---GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN   68 (342)
T ss_dssp             TTSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT
T ss_pred             CCceEEEEEEC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC
Confidence            4455 455554   689999999999999999999999999999999999999874

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.83  E-value=1.2e-09  Score=94.83  Aligned_cols=55  Identities=9%  Similarity=0.189  Sum_probs=48.6

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEE----EEEECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVT----RVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVt----SVaFhPd~  292 (294)
                      ...|++|+|+| ++++|+|||.|++|+|||+++++++++|+||...|.    .++|.|++
T Consensus       289 ~~~V~~l~fsp-d~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~  347 (393)
T d1sq9a_         289 SSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHG  347 (393)
T ss_dssp             SSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTS
T ss_pred             cCceeeeccCC-CCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCC
Confidence            56799999999 799999999999999999999999999999988775    35666654

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.81  E-value=3.7e-09  Score=91.67  Aligned_cols=56  Identities=13%  Similarity=0.177  Sum_probs=51.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCc---EEEEeCCCcceEEEec-------------cCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQ---ATVFNKDTEQVVAILK-------------GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGT---VkVWDleTgKvV~TLk-------------GHTkkVtSVaFhPd~~  293 (294)
                      ...|++|+|+| ++++|++|+.|++   |+|||+++++++.+|.             ||++.|++|+|+|+++
T Consensus       231 ~~~V~~l~~sp-dg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~  302 (393)
T d1sq9a_         231 SNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE  302 (393)
T ss_dssp             CCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS
T ss_pred             cceEEEccccc-ccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCC
Confidence            56799999999 7999999999985   8999999999988885             8999999999999875

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.76  E-value=9.4e-09  Score=87.76  Aligned_cols=56  Identities=4%  Similarity=0.011  Sum_probs=50.4

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcce--EEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQV--VAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKv--V~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|+|++|+| ++++||||+.|++|+|||+.+++.  ..++.+|+.+|.+++|+|+++
T Consensus        58 ~~~v~~~~~sp-~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~  115 (311)
T d1nr0a1          58 SHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK  115 (311)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred             CCCEEEEEEeC-CCCeEeccccCceEeeeeeeccccccccccccccCcccccccccccc
Confidence            46799999999 699999999999999999998764  467899999999999999875

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.64  E-value=4.2e-08  Score=77.69  Aligned_cols=53  Identities=11%  Similarity=0.192  Sum_probs=43.5

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc-CCCcEEEEEEC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG-HRKKVTRVVYH  289 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG-HTkkVtSVaFh  289 (294)
                      +...|++|+|+| ++++|||||.||+|+|||+++++.+.++.. |...|.++.++
T Consensus       250 ~~~~v~~l~~sp-~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~  303 (342)
T d1yfqa_         250 LAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACS  303 (342)
T ss_dssp             SCCCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEEC
T ss_pred             ccccceeEEecC-CccEEEEECCCCEEEEEECCCCcEEEEecCCCCCEEEEEEeC
Confidence            355799999999 689999999999999999999999999864 54555554443

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.62  E-value=4.7e-08  Score=81.60  Aligned_cols=53  Identities=23%  Similarity=0.360  Sum_probs=49.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+++++++.+|++|...|++++|.+
T Consensus       308 ~~~v~~~~~s~-~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~  360 (388)
T d1erja_         308 KDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN  360 (388)
T ss_dssp             SSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred             cceEEEEEECC-CCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEec
Confidence            45799999999 689999999999999999999999999999999999998654

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.61  E-value=5.1e-08  Score=79.03  Aligned_cols=56  Identities=14%  Similarity=0.320  Sum_probs=49.1

Q ss_pred             CCCEEEEEeccC---------CCCEEEEecCCCcEEEEeCCC-cceEEEeccCCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVE---------DTSKILTGGNDCQATVFNKDT-EQVVAILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSps---------DgnlLATGG~DGTVkVWDleT-gKvV~TLkGHTkkVtSVaFhPd~  292 (294)
                      ...|++++|+|.         ++.+|+||+.|++|+|||+++ .+.+..+.+|...|++|.|+|++
T Consensus       205 ~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~  270 (287)
T d1pgua2         205 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS  270 (287)
T ss_dssp             SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT
T ss_pred             ccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC
Confidence            457999999863         457899999999999999977 67888999999999999999975

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=5.3e-08  Score=82.05  Aligned_cols=55  Identities=15%  Similarity=0.104  Sum_probs=46.1

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc-----eEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ-----VVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK-----vV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.|++|+| ++.+||||+ |++|+|||+.+..     ......+|+..|++++|+|+++
T Consensus        51 ~~~V~~v~fs~-~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~  110 (337)
T d1gxra_          51 GEVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC  110 (337)
T ss_dssp             SSCCCEEEECS-SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS
T ss_pred             CCcEEEEEECC-CCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCC
Confidence            45799999999 799999998 8999999997653     2334568999999999999975

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=7.9e-08  Score=80.94  Aligned_cols=55  Identities=9%  Similarity=0.054  Sum_probs=50.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++++|+| ++++|+||+.|++|+|||+.+++++.++. |...|++++|+|+++
T Consensus       265 ~~~i~~v~~s~-~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~  319 (337)
T d1gxra_         265 ESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDK  319 (337)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSC
T ss_pred             ccccceEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCC
Confidence            56799999999 78999999999999999999999998876 779999999999875

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=1.3e-07  Score=75.24  Aligned_cols=54  Identities=13%  Similarity=0.226  Sum_probs=47.2

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEec-----cCCCcEEEEEECCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILK-----GHRKKVTRVVYHPSE  292 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLk-----GHTkkVtSVaFhPd~  292 (294)
                      +...+.++++++   +++++|+.||+|+|||+++++++++|.     +|...|++|+|+|++
T Consensus       259 ~~~~~~~~~~~~---~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~  317 (342)
T d2ovrb2         259 HQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK  317 (342)
T ss_dssp             CSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSE
T ss_pred             eeeceeecccCC---CeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCC
Confidence            455788888874   699999999999999999999998874     688899999999975

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.50  E-value=9.2e-08  Score=82.07  Aligned_cols=56  Identities=13%  Similarity=0.125  Sum_probs=52.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++|+.|++|+|||+.+++.+.++++|..+|++++|+|+++
T Consensus       201 ~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~  256 (371)
T d1k8kc_         201 CGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS  256 (371)
T ss_dssp             SSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTE
T ss_pred             cCcEEEEEeec-ccccccccccCCcceEEeeecccceeeeecccccceeeeecCCCC
Confidence            45799999999 689999999999999999999999999999999999999999863

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.46  E-value=2.4e-07  Score=78.84  Aligned_cols=56  Identities=20%  Similarity=0.368  Sum_probs=51.0

Q ss_pred             CCCEEEEEeccCCCC-EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+|. ++ +|+||+.|++|+|||+++++++..+++|+.+|+++.|+|+++
T Consensus       146 ~~~v~~v~~~~~-~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~  202 (311)
T d1nr0a1         146 ARAMNSVDFKPS-RPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS  202 (311)
T ss_dssp             SSCEEEEEECSS-SSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS
T ss_pred             cccccccccccc-ceeeecccccccccccccccccccccccccccccccccccCcccc
Confidence            457999999994 55 589999999999999999999999999999999999999875

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.46  E-value=2.3e-07  Score=77.31  Aligned_cols=56  Identities=23%  Similarity=0.351  Sum_probs=52.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+|+|+| ++++|+||+.|++|++||..+++.+..+.+|...|+++.|++++.
T Consensus       121 ~~~V~~l~~s~-~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  176 (388)
T d1erja_         121 DLYIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD  176 (388)
T ss_dssp             CCBEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred             CCCEEEEEECC-CCCcceecccccccccccccccccccccccccccccccccccccc
Confidence            45699999999 799999999999999999999999999999999999999999764

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.45  E-value=2.6e-07  Score=74.78  Aligned_cols=55  Identities=13%  Similarity=0.176  Sum_probs=49.3

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEE-EeccCCCcEEEEEECCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVA-ILKGHRKKVTRVVYHPSE  292 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~-TLkGHTkkVtSVaFhPd~  292 (294)
                      ...|++++|+| ++.+|++|+.|+.|+|||+.+++.+. .+.+|+.+|++++|+|.+
T Consensus       162 ~~~v~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~  217 (287)
T d1pgua2         162 RAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAE  217 (287)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC
T ss_pred             CCceeEEEecc-Cccccccccccccccceeecccccccccccccccccceeeecccc
Confidence            34699999999 79999999999999999999988765 578999999999999965

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.36  E-value=2.6e-07  Score=78.17  Aligned_cols=55  Identities=9%  Similarity=0.227  Sum_probs=48.1

Q ss_pred             CCCCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEEC
Q psy12461        235 ASVPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYH  289 (294)
Q Consensus       235 as~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFh  289 (294)
                      .+...|.+++|+|..+.+|++|+.|++|+|||+++++++.+|++|..+|.++.|+
T Consensus       203 ~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s  257 (325)
T d1pgua1         203 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA  257 (325)
T ss_dssp             CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEE
T ss_pred             CCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceee
Confidence            3456799999999557899999999999999999999999999999888766665

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.35  E-value=4.2e-07  Score=73.69  Aligned_cols=56  Identities=11%  Similarity=0.153  Sum_probs=49.4

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceE---EEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVV---AILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV---~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|++++|+| ++++|++|+.|+.|++||+.++..+   ..+.+|..+|++++|+|+++
T Consensus       179 ~~~i~~~~~~~-~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~  237 (299)
T d1nr0a2         179 PAEITSVAFSN-NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV  237 (299)
T ss_dssp             SSCEEEEEECT-TSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSS
T ss_pred             ccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            45799999998 6899999999999999999887644   46788999999999999875

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.18  E-value=1.8e-06  Score=70.38  Aligned_cols=56  Identities=9%  Similarity=0.159  Sum_probs=52.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|+| ++++|++++.|+.+++||+.++++...+..|...+.+++|+|+++
T Consensus        85 ~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~  140 (360)
T d1k32a3          85 LGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSR  140 (360)
T ss_dssp             CCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSC
T ss_pred             CceEEeeeecc-cccccceeccccccccccccccceeeeeecccccccchhhcccee
Confidence            45799999999 799999999999999999999999999999999999999999986

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.14  E-value=2.5e-06  Score=69.40  Aligned_cols=56  Identities=11%  Similarity=-0.017  Sum_probs=47.4

Q ss_pred             CCCCEEEEEeccCCCCEEEEecCCC--cEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        236 SVPGILAMDIQVEDTSKILTGGNDC--QATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       236 s~pGIlSLdfSpsDgnlLATGG~DG--TVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      +...|.+++|+| |+++|+++|.|.  .|+|||.+++++. .+.+|...|++++|+|+++
T Consensus        41 ~~~~v~~~~~sp-Dg~~l~~~~~~~g~~v~v~d~~~~~~~-~~~~~~~~v~~~~~spdg~   98 (360)
T d1k32a3          41 EPLRIRYVRRGG-DTKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGK   98 (360)
T ss_dssp             CCSCEEEEEECS-SSEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSS
T ss_pred             CCCCEEEEEECC-CCCEEEEEEcCCCCEEEEEECCCCcEE-EeeCCCceEEeeeeccccc
Confidence            356799999999 798888766553  8999999988754 6788999999999999986

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.01  E-value=1.6e-06  Score=76.17  Aligned_cols=55  Identities=7%  Similarity=0.010  Sum_probs=46.8

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEE-----eccCCCcEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAI-----LKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~T-----LkGHTkkVtSVaFhPd~~Q  294 (294)
                      .+..|+|+| |+++|++++.|++|+|||+.+++...+     ..+|...+.+++|+||+++
T Consensus        63 ~~~~vafSP-DGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~  122 (426)
T d1hzua2          63 AVHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRY  122 (426)
T ss_dssp             SEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTE
T ss_pred             CeeEEEECC-CCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCE
Confidence            588999999 899999999999999999999874433     3478888899999999864

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.96  E-value=1.2e-05  Score=63.91  Aligned_cols=54  Identities=11%  Similarity=0.209  Sum_probs=49.9

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ...+.++.|++ +++++++++.|++|+|||+++++++..+++|+..|+++.|+++
T Consensus       201 ~~~~~~~~~~~-~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~~  254 (355)
T d1nexb2         201 TDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDK  254 (355)
T ss_dssp             SSCEEEEEEET-TTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECSS
T ss_pred             ccccccccccc-cceeeecccccceEEeeeccccccccccccccccccccccccc
Confidence            45688999998 6899999999999999999999999999999999999999874

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.83  E-value=3.3e-05  Score=64.93  Aligned_cols=56  Identities=13%  Similarity=0.204  Sum_probs=49.2

Q ss_pred             CCCEEEEEeccCCCCEEEEec--CCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGG--NDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG--~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ...|.+++|++ ++.+|++++  .|+.+++|++++++++.++++|+..|++++|+|++.
T Consensus       115 ~~~v~~v~~s~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  172 (325)
T d1pgua1         115 AGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRP  172 (325)
T ss_dssp             SSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSS
T ss_pred             cCcEEEEEECC-CCCccceeeccccceEEEEeecccccceeeeeccccccccccccccc
Confidence            45699999998 688877654  578899999999999999999999999999999864

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.80  E-value=4.1e-06  Score=73.50  Aligned_cols=57  Identities=14%  Similarity=0.123  Sum_probs=47.9

Q ss_pred             CCCEEEEEeccCCCCEEE-------EecCCCcEEEEeCCCcceEEEe---------ccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKIL-------TGGNDCQATVFNKDTEQVVAIL---------KGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLA-------TGG~DGTVkVWDleTgKvV~TL---------kGHTkkVtSVaFhPd~~Q  294 (294)
                      ..++.+++|+| |+.+|+       +|+.|++|+|||+.+++++.++         ..|.++|.+++|+||+++
T Consensus       303 ~~~v~~v~~sP-dg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~  375 (426)
T d1hzua2         303 GGGSLFIKTHP-KSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDE  375 (426)
T ss_dssp             SSCCCCEECCT-TCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSE
T ss_pred             CCceeEEEcCC-CCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCE
Confidence            45689999999 788888       5778999999999999877664         356788999999999974

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.62  E-value=1.6e-05  Score=71.45  Aligned_cols=55  Identities=13%  Similarity=0.052  Sum_probs=45.8

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcc--eEE---EeccCCCcEEEEEECCCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQ--VVA---ILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgK--vV~---TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      .+..++|+| |+++|++++.|++|+|||+.+++  .+.   ...+|...+.++.|+||+++
T Consensus        63 ~~~~v~fSp-DG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~  122 (432)
T d1qksa2          63 AVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKY  122 (432)
T ss_dssp             CEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTE
T ss_pred             CeeEEEECC-CCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCE
Confidence            589999999 89999999999999999998876  333   34567778888889999874

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.53  E-value=4.5e-05  Score=61.01  Aligned_cols=54  Identities=6%  Similarity=-0.071  Sum_probs=44.8

Q ss_pred             CEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEeccCCC-----cEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKGHRK-----KVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkGHTk-----kVtSVaFhPd~~  293 (294)
                      .+.+++|+| |++++ ++++.|+.|.+||+.+++++.++..+..     .+..++|+|+++
T Consensus        35 ~~~~i~~sp-Dg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~   94 (337)
T d1pbyb_          35 TPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGK   94 (337)
T ss_dssp             CCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSS
T ss_pred             CccEEEECC-CCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCc
Confidence            467899999 78876 6788899999999999999999887643     445789999875

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.51  E-value=8.8e-05  Score=60.71  Aligned_cols=52  Identities=6%  Similarity=0.033  Sum_probs=42.8

Q ss_pred             CEEEEEeccCCCC--EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        239 GILAMDIQVEDTS--KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       239 GIlSLdfSpsDgn--lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      .+.+++|+| |++  ++++++.|++|.|||.++++++++++++...-..|.+.++
T Consensus       301 ~~~~~a~sp-DG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~  354 (355)
T d2bbkh_         301 EIDSINVSQ-DEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM  354 (355)
T ss_dssp             EECEEEECC-SSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECCCC
T ss_pred             CEEEEEEcC-CCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEeCCC
Confidence            477999999 676  5788999999999999999999999987665566665544

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=97.50  E-value=0.00012  Score=60.64  Aligned_cols=53  Identities=4%  Similarity=-0.063  Sum_probs=45.7

Q ss_pred             CCEEEEEeccCCCC--EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCC
Q psy12461        238 PGILAMDIQVEDTS--KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPS  291 (294)
Q Consensus       238 pGIlSLdfSpsDgn--lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd  291 (294)
                      ..+.+++|+| |++  ++++++.|++|+|||+.+++.++++.+|...-+.+++-++
T Consensus       318 ~~~~~~a~sp-DG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         318 HDVDAISVAQ-DGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             CCeeEEEECC-CCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEecC
Confidence            4688999999 777  5679999999999999999999999988888888776543

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=97.49  E-value=0.00012  Score=57.80  Aligned_cols=53  Identities=15%  Similarity=0.255  Sum_probs=45.7

Q ss_pred             CEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ....++|+| |+++| ++++.|+.|++||+.+++++.++..|. .+..+.|+++++
T Consensus        33 ~p~~va~sp-dG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~~~~~   86 (301)
T d1l0qa2          33 NPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGK   86 (301)
T ss_dssp             SEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSS
T ss_pred             CceEEEEeC-CCCEEEEEECCCCEEEEEECCCCceeeeeeccc-cccccccccccc
Confidence            467899999 78866 688889999999999999999999885 468899998865

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=97.46  E-value=5.7e-05  Score=60.60  Aligned_cols=41  Identities=24%  Similarity=0.246  Sum_probs=37.3

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccC
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGH  279 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGH  279 (294)
                      ..+.+++|+| |+++|++|+.|++|+|||.++++.+.+++.+
T Consensus       292 ~~~~~va~s~-DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p  332 (346)
T d1jmxb_         292 HTYYCVAFDK-KGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  332 (346)
T ss_dssp             SCCCEEEECS-SSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             CCEEEEEEcC-CCCEEEEEeCCCcEEEEECccCCEEEEEECC
Confidence            3588999999 8999999999999999999999999999843

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.33  E-value=0.00014  Score=58.10  Aligned_cols=40  Identities=13%  Similarity=0.212  Sum_probs=36.4

Q ss_pred             CCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEecc
Q psy12461        238 PGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKG  278 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkG  278 (294)
                      ..+.+++|+| |+++|++|+.|++|+|||.++.+.+.+++-
T Consensus       280 ~~~~~~~~s~-dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~  319 (337)
T d1pbyb_         280 HSYYSVNVST-DGSTVWLGGALGDLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             SCCCEEEECT-TSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcEEEEEEC
Confidence            4678999999 799999999999999999999999998863

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=97.26  E-value=0.00021  Score=57.20  Aligned_cols=54  Identities=9%  Similarity=-0.052  Sum_probs=43.8

Q ss_pred             CEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEeccCCC------cEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKGHRK------KVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkGHTk------kVtSVaFhPd~~  293 (294)
                      +..+|+|+| |+.++ +++..|+.|++||+.+++.+.++.....      .+..++|+||++
T Consensus        41 ~p~~l~~sp-DG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~  101 (346)
T d1jmxb_          41 GPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK  101 (346)
T ss_dssp             SSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSS
T ss_pred             CcceEEECC-CCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCC
Confidence            567999999 78875 6777899999999999999988765432      456889999876

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=0.00014  Score=58.59  Aligned_cols=56  Identities=5%  Similarity=0.031  Sum_probs=42.1

Q ss_pred             CCEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEec---cCCCcEEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILK---GHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLk---GHTkkVtSVaFhPd~~Q  294 (294)
                      ..+.+|+|+| |+++| +++..|++|++|++.......++.   .+...+..++|+||+++
T Consensus        37 ~~v~~la~sp-DG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~   96 (333)
T d1ri6a_          37 GQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQF   96 (333)
T ss_dssp             SCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSE
T ss_pred             CCEeEEEEeC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCE
Confidence            5688999999 78877 566679999999998765333333   23456788999999863

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00093  Score=51.20  Aligned_cols=51  Identities=16%  Similarity=0.379  Sum_probs=43.8

Q ss_pred             CCCEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ...|.++.+++   .++++|+.|++|+|||+++.+.+..+.+|...|..+.+.+
T Consensus       178 ~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~  228 (293)
T d1p22a2         178 KRGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN  228 (293)
T ss_dssp             SSCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCS
T ss_pred             ccccccccCCC---CeEEEecCCCEEEEEecccceeeeeecccceeeeeccccc
Confidence            45688888764   6899999999999999999999999999999998776543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.03  E-value=0.00033  Score=61.34  Aligned_cols=56  Identities=16%  Similarity=0.152  Sum_probs=48.0

Q ss_pred             CCCEEEEEeccCCCCEEEEecC---------CCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTGGN---------DCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATGG~---------DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...|.++.||| |+++||.++.         ++.+.|||+.+++ +..+..|.+.+..+.|+||+++
T Consensus        61 ~~~i~~~~~Sp-Dg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~~~~~~~~~~~SPDG~~  125 (470)
T d2bgra1          61 GHSINDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGHK  125 (470)
T ss_dssp             SSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCTTEEEEEECSSTTC
T ss_pred             cCccceeEECC-CCCEEEEEECCcceeeeccCceEEEEECCCCc-ccccccCCccccccccccCcce
Confidence            35699999999 8999998754         5678999999988 5668999999999999999874

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=96.99  E-value=0.00066  Score=53.44  Aligned_cols=40  Identities=15%  Similarity=0.199  Sum_probs=35.1

Q ss_pred             CCEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEecc
Q psy12461        238 PGILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILKG  278 (294)
Q Consensus       238 pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLkG  278 (294)
                      ..+.+|+|+| |+++| ++++.|++|+|||+++++++.+++.
T Consensus       244 ~~~~~va~sp-dg~~l~va~~~~~~i~v~D~~t~~~~~~~~v  284 (301)
T d1l0qa2         244 PDPAGIAVTP-DGKKVYVALSFCNTVSVIDTATNTITATMAV  284 (301)
T ss_dssp             SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             CCEEEEEEeC-CCCEEEEEECCCCeEEEEECCCCeEEEEEeC
Confidence            4689999999 78865 7889999999999999999999874

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=96.76  E-value=0.0009  Score=59.64  Aligned_cols=42  Identities=14%  Similarity=0.018  Sum_probs=38.5

Q ss_pred             EEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        252 KILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       252 lLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ++++.+.|++|.|||.++++++.+|+.| ..+..++|+||+++
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~   75 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRY   75 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCE
Confidence            4699999999999999999999999988 57999999999874

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=96.20  E-value=0.0039  Score=51.26  Aligned_cols=55  Identities=11%  Similarity=-0.030  Sum_probs=43.8

Q ss_pred             CCCEEEEEeccCCCCEEEEe-----cCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCCC
Q psy12461        237 VPGILAMDIQVEDTSKILTG-----GNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       237 ~pGIlSLdfSpsDgnlLATG-----G~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~Q  294 (294)
                      ...+.+++++| |+..++..     +.++.|.|||..+++++.++.++..+  .++|+||+++
T Consensus        20 ~~p~~~~a~sp-dg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~   79 (373)
T d2madh_          20 DGPTNDEAPGA-DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSE   79 (373)
T ss_pred             CCCccccccCC-CCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCE
Confidence            34588899999 78876543     34567999999999999999988655  7999999874

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.93  E-value=0.0022  Score=52.16  Aligned_cols=52  Identities=17%  Similarity=-0.022  Sum_probs=39.9

Q ss_pred             EEEEeccCCCCEEEE----------ecCCCcEEEEeCCCcceEEEeccCCCcE-------EEEEECCCCC
Q psy12461        241 LAMDIQVEDTSKILT----------GGNDCQATVFNKDTEQVVAILKGHRKKV-------TRVVYHPSEL  293 (294)
Q Consensus       241 lSLdfSpsDgnlLAT----------GG~DGTVkVWDleTgKvV~TLkGHTkkV-------tSVaFhPd~~  293 (294)
                      ..++|+| |+++|++          |..|+.|+|||.++++++.++..+..+.       ..++|+|+++
T Consensus        50 ~~~a~Sp-Dg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~  118 (355)
T d2bbkh_          50 PNPVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK  118 (355)
T ss_dssp             CEEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS
T ss_pred             CceEEcC-CCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCC
Confidence            3689999 7887764          3458999999999999999887654433       4568888875

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.57  E-value=0.0086  Score=50.27  Aligned_cols=41  Identities=7%  Similarity=0.050  Sum_probs=35.1

Q ss_pred             CEEEEEeccCCCC--EEEEecCCCcEEEEeCCCcceEEEeccCC
Q psy12461        239 GILAMDIQVEDTS--KILTGGNDCQATVFNKDTEQVVAILKGHR  280 (294)
Q Consensus       239 GIlSLdfSpsDgn--lLATGG~DGTVkVWDleTgKvV~TLkGHT  280 (294)
                      .+.+++|+| |++  ++++++.|++|+|||..+++++.+++...
T Consensus       315 ~~~~~a~sp-DG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~  357 (368)
T d1mdah_         315 DSDAIIAAQ-DGASDNYANSAGTEVLDIYDAASDQDQSSVELDK  357 (368)
T ss_dssp             EECEEEECC-SSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred             ceeEEEECC-CCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCC
Confidence            477899999 675  46788999999999999999999998653

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=94.99  E-value=0.0086  Score=50.27  Aligned_cols=52  Identities=13%  Similarity=-0.081  Sum_probs=40.6

Q ss_pred             EEEeccCCCCEEEEe----------cCCCcEEEEeCCCcceEEEeccCCCc-------EEEEEECCCCCC
Q psy12461        242 AMDIQVEDTSKILTG----------GNDCQATVFNKDTEQVVAILKGHRKK-------VTRVVYHPSELQ  294 (294)
Q Consensus       242 SLdfSpsDgnlLATG----------G~DGTVkVWDleTgKvV~TLkGHTkk-------VtSVaFhPd~~Q  294 (294)
                      .++|+| |+.+|++.          +.|++|.+||..+++++..+..|...       ...++|+||+++
T Consensus        69 ~~a~sp-Dg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~  137 (368)
T d1mdah_          69 LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC  137 (368)
T ss_dssp             EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC
T ss_pred             cceECC-CCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCE
Confidence            478998 78877764          45889999999999999988765433       235899999874

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.05  E-value=0.048  Score=47.12  Aligned_cols=49  Identities=12%  Similarity=0.177  Sum_probs=38.7

Q ss_pred             EEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEe-----ccCCCcEEEEEECCCCC
Q psy12461        242 AMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAIL-----KGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       242 SLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TL-----kGHTkkVtSVaFhPd~~  293 (294)
                      ++.|.+ ++.++...  |+.+.+||+.+++....|     ..|...|.++.|+||++
T Consensus        21 ~~~W~~-d~~~~~~~--~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~   74 (470)
T d2bgra1          21 SLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQ   74 (470)
T ss_dssp             CCEECS-SSEEEEES--SSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSS
T ss_pred             CCEeCC-CCEEEEEc--CCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCC
Confidence            467886 67777654  788999999999876644     44557899999999986

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=91.20  E-value=0.23  Score=42.11  Aligned_cols=53  Identities=17%  Similarity=0.224  Sum_probs=45.0

Q ss_pred             EEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        240 ILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       240 IlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      -..+++.+ ++++.++....+.|.+||.+.++++.++.......++++|.|+++
T Consensus       228 pdGiavD~-~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~  280 (314)
T d1pjxa_         228 ADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTK  280 (314)
T ss_dssp             EEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSS
T ss_pred             ceeeEEec-CCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCC
Confidence            45788886 689888777788999999999998888888778899999999764

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=90.33  E-value=0.17  Score=39.76  Aligned_cols=56  Identities=13%  Similarity=-0.013  Sum_probs=39.6

Q ss_pred             CCEEEEEeccCCCC-EEEEecCCCcEEEEeCCCcceEEEec---cCCCcEEEEEECCCCCC
Q psy12461        238 PGILAMDIQVEDTS-KILTGGNDCQATVFNKDTEQVVAILK---GHRKKVTRVVYHPSELQ  294 (294)
Q Consensus       238 pGIlSLdfSpsDgn-lLATGG~DGTVkVWDleTgKvV~TLk---GHTkkVtSVaFhPd~~Q  294 (294)
                      .....+++++ +++ +++++..++++.+|++........+.   .+...+.+++|+||+++
T Consensus       230 ~~~~~~~~s~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~  289 (333)
T d1ri6a_         230 RWAADIHITP-DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKY  289 (333)
T ss_dssp             CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSE
T ss_pred             ccceeEEEec-ccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCE
Confidence            3567788888 566 45667788999999997654333333   23456789999999873

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=89.43  E-value=0.79  Score=37.59  Aligned_cols=52  Identities=13%  Similarity=0.082  Sum_probs=41.1

Q ss_pred             CEEEEEeccCCCCEEEEecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        239 GILAMDIQVEDTSKILTGGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       239 GIlSLdfSpsDgnlLATGG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      .+-.++++| |+++++|...+++|..||.....  ..+-.....+.+++|.|+++
T Consensus        29 ~~e~iAv~p-dG~l~vt~~~~~~I~~i~p~g~~--~~~~~~~~~~~gla~~~dG~   80 (302)
T d2p4oa1          29 FLENLASAP-DGTIFVTNHEVGEIVSITPDGNQ--QIHATVEGKVSGLAFTSNGD   80 (302)
T ss_dssp             CEEEEEECT-TSCEEEEETTTTEEEEECTTCCE--EEEEECSSEEEEEEECTTSC
T ss_pred             CcCCEEECC-CCCEEEEeCCCCEEEEEeCCCCE--EEEEcCCCCcceEEEcCCCC
Confidence            477899999 79999999999999999976442  23344456899999999875

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.04  E-value=1.7  Score=33.48  Aligned_cols=54  Identities=9%  Similarity=0.058  Sum_probs=38.8

Q ss_pred             CCEEEEEeccCCCCEEEEecCC---CcEEEEeCCCcceEEEeccCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKILTGGND---CQATVFNKDTEQVVAILKGHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlLATGG~D---GTVkVWDleTgKvV~TLkGHTkkVtSVaFhPd~~  293 (294)
                      ..+.+-+||| ||+.||-...+   ..+.+++..++.. ..+..+...+....|+|+++
T Consensus        39 ~~~~sP~wSP-DGk~IAf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~   95 (269)
T d2hqsa1          39 QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGS   95 (269)
T ss_dssp             SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSS
T ss_pred             CceeeeEECC-CCCEEEEEEeeccCcceeeeecccCce-eEEeeeecccccceecCCCC
Confidence            4578899999 89988854333   2466667766653 44555678889999999986

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=82.32  E-value=0.74  Score=42.44  Aligned_cols=55  Identities=11%  Similarity=0.098  Sum_probs=45.4

Q ss_pred             CCEEEEEeccCCCCEE-EEecCCCcEEEEeCCCcceEEEec-cCCCcEEEEEECCCCC
Q psy12461        238 PGILAMDIQVEDTSKI-LTGGNDCQATVFNKDTEQVVAILK-GHRKKVTRVVYHPSEL  293 (294)
Q Consensus       238 pGIlSLdfSpsDgnlL-ATGG~DGTVkVWDleTgKvV~TLk-GHTkkVtSVaFhPd~~  293 (294)
                      |.+.+.+++| |+++| ++.-.+..|.++|++++++...++ .+...+..++|+|+++
T Consensus        72 P~~s~t~gtp-DGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~  128 (441)
T d1qnia2          72 PHISMTDGRY-DGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPK  128 (441)
T ss_dssp             CEEEEETTEE-EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSB
T ss_pred             CCcceecccC-CCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCC
Confidence            5577777888 78876 566788999999999999988776 3667899999999876

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.16  E-value=1.7  Score=33.57  Aligned_cols=50  Identities=12%  Similarity=0.079  Sum_probs=37.4

Q ss_pred             CEEEEEeccCCCCEEEE---ecCCCcEEEEeCCCcceEEEeccCCCcEEEEEECC
Q psy12461        239 GILAMDIQVEDTSKILT---GGNDCQATVFNKDTEQVVAILKGHRKKVTRVVYHP  290 (294)
Q Consensus       239 GIlSLdfSpsDgnlLAT---GG~DGTVkVWDleTgKvV~TLkGHTkkVtSVaFhP  290 (294)
                      ......|+| |++.||-   -+....+.+||+..+.. ..|......+...+|+|
T Consensus       215 ~~~~p~~SP-DG~~i~f~s~~~~~~~l~~~~~dg~~~-~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         215 LDETPSLAP-NGTMVIYSSSQGMGSVLNLVSTDGRFK-ARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             SCEEEEECT-TSSEEEEEEEETTEEEEEEEETTSCCE-EECCCSSSEEEEEEECC
T ss_pred             cccceEECC-CCCEEEEEEcCCCCcEEEEEECCCCCE-EEEeCCCCcEEeEEeCC
Confidence            456778999 7998773   33456789999987664 45666667888999998