Psyllid ID: psy12488

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-
Protein Sequence
MYRSHNKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLAVIEKDS
Secondary Structure (PSIPRED)
ccccccEEEEEEEcccEEEEcccccccccEEEEEEEcccccccccEEEccccccccEEEcccccccEEEEccEEEEEEEcccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEccccEEEcccccccccccEEEEEccccccccccEEEEEEEcccEEEEEEccccEEEEcccEEEEEEHHHHEEEEEccc
Coil and Loop (DISEMBL)
myrshnklsiyllfpggvlipekaqqeVNNAVVVAvgpgartpngeyikpvvnvgdkvllpkfggtkieVEGQELHLFKEADLLAVIEKDS
Flexible Loop (DISEMBL)
myrshnklSIYLLFPGGVLIPEKAQQEVNNAVVVAVGpgartpngeyikpvvnVGDKVLLPKFGGTKIEvegqelhlfkeadllaviekds
Low Complexity Region (SEG)
MYRSHNKLSIYLLFPGGVLIPEKAQQEvnnavvvavGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLAVIEKDS
Disordered region (IsUnstruct)
*******LSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLAVI****
Disordered Region (DISOPRED)
****HNKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLAVIEK**
Disordered Region (DISEMBL)
MYRSHNKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLAVIEKDS
Disordered Region (DISPRO)
***SHNKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLAVIEKD*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYRSHNKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLAVIEKDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	91	2.2.26 [Sep-21-2011]
Q5DC69	102	10 kDa heat shock protein	N/A	N/A	0.813	0.725	0.513	2e-14
Q5LV16	95	10 kDa chaperonin OS=Rueg	yes	N/A	0.802	0.768	0.452	4e-13
A7HQQ1	105	10 kDa chaperonin OS=Parv	yes	N/A	0.802	0.695	0.438	4e-13
Q9W6X3	99	10 kDa heat shock protein	N/A	N/A	0.769	0.707	0.5	6e-13
P0CAU0	96	10 kDa chaperonin OS=Caul	yes	N/A	0.802	0.760	0.438	2e-12
B8H164	96	10 kDa chaperonin OS=Caul	yes	N/A	0.802	0.760	0.438	2e-12
A5G9I1	96	10 kDa chaperonin OS=Geob	yes	N/A	0.813	0.770	0.5	2e-12
B3DZP6	99	10 kDa chaperonin OS=Meth	yes	N/A	0.802	0.737	0.438	2e-12
Q96539	98	10 kDa chaperonin OS=Bras	N/A	N/A	0.802	0.744	0.445	3e-12
Q9Z463	95	10 kDa chaperonin OS=Para	yes	N/A	0.791	0.757	0.430	3e-12

>sp|Q5DC69|CH10_SCHJA 10 kDa heat shock protein, mitochondrial OS=Schistosoma japonicum GN=SJCHGC01960 PE=3 SV=2

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 52/74 (70%)

Query: 16  GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
           GG+++PEKA+ +V  A VVA GPG +   GE +   V VGDKV LP++GGTK+ +E  E 
Sbjct: 29  GGIMLPEKAKGKVLEATVVAHGPGVKNEKGEVVPVCVTVGDKVFLPEYGGTKVVLEDTEY 88

Query: 76  HLFKEADLLAVIEK 89
            LF+E+D+LA  EK
Sbjct: 89  FLFRESDILAKFEK 102

Eukaryotic CPN10 homolog which is essential for mitochondrial protein biogenesis, together with CPN60. Binds to CPN60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
Schistosoma japonicum (taxid: 6182)

>sp|Q5LV16|CH10_RUEPO 10 kDa chaperonin OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=groS PE=3 SV=1

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 52/73 (71%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IP+ A+++ +  VVVA G GAR  +GE I   V  GD+VL  K+ GT++ V+G+EL
Sbjct: 23 GGLIIPDSAKEKPSEGVVVACGEGARKDSGELIAMAVKSGDRVLFGKWSGTEVTVDGEEL 82

Query: 76 HLFKEADLLAVIE 88
           + KE+D++ +IE
Sbjct: 83 LMMKESDIMGIIE 95

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Silicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (taxid: 246200)

>sp|A7HQQ1|CH10_PARL1 10 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groS PE=3 SV=1

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 55/73 (75%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IP+ AQ++ +   VVAVGPGAR  +G+ +   V VGD+V+  K+ GT+++++G+EL
Sbjct: 23 GGIIIPDSAQEKPSQGEVVAVGPGARGDDGKLVALDVKVGDRVIFGKWSGTEVKIDGEEL 82

Query: 76 HLFKEADLLAVIE 88
           + KE+D++ V+E
Sbjct: 83 LIMKESDIMGVLE 95

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) (taxid: 402881)

>sp|Q9W6X3|CH10_ORYLA 10 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 51/70 (72%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG+++PEK+Q +V  A VVAVGPG+    GE     V VG+KVLLP++GGTK+ +E ++ 
Sbjct: 26 GGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVKVGEKVLLPQYGGTKVVLEDKDY 85

Query: 76 HLFKEADLLA 85
           LF++AD+L 
Sbjct: 86 FLFRDADILG 95

Eukaryotic cpn10 homolog which is essential for mitochondrial protein biogenesis, together with cpn60. Binds to cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Oryzias latipes (taxid: 8090)

>sp|P0CAU0|CH10_CAUCR 10 kDa chaperonin OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=groS PE=3 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 52/73 (71%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IP+ A+++     VVAVGPGAR   G+ +   V  GD++L  K+ GT+++V+GQ+L
Sbjct: 23 GGIIIPDTAKEKPQEGEVVAVGPGARNDKGDVVALDVKAGDRILFGKWSGTEVKVDGQDL 82

Query: 76 HLFKEADLLAVIE 88
           + KE+D+L V+E
Sbjct: 83 LIMKESDVLGVVE 95

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Caulobacter crescentus (strain ATCC 19089 / CB15) (taxid: 190650)

>sp|B8H164|CH10_CAUCN 10 kDa chaperonin OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=groS PE=2 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 52/73 (71%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IP+ A+++     VVAVGPGAR   G+ +   V  GD++L  K+ GT+++V+GQ+L
Sbjct: 23 GGIIIPDTAKEKPQEGEVVAVGPGARNDKGDVVALDVKAGDRILFGKWSGTEVKVDGQDL 82

Query: 76 HLFKEADLLAVIE 88
           + KE+D+L V+E
Sbjct: 83 LIMKESDVLGVVE 95

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Caulobacter crescentus (strain NA1000 / CB15N) (taxid: 565050)

>sp|A5G9I1|CH10_GEOUR 10 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groS PE=3 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 51/74 (68%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG+ IPE A+++     VVAVG G RT +G+ +   V VGDKVL  K+ GT+I+VEGQ+ 
Sbjct: 23 GGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIKVEGQDF 82

Query: 76 HLFKEADLLAVIEK 89
           + +E D+L VIEK
Sbjct: 83 LIMREDDILGVIEK 96

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Geobacter uraniireducens (strain Rf4) (taxid: 351605)

>sp|B3DZP6|CH10_METI4 10 kDa chaperonin OS=Methylacidiphilum infernorum (isolate V4) GN=groS PE=3 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 52/73 (71%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IP+ A+++   A V+AVGPG    NG+ I   V  GDKVL+ K+GGT+++++G+  
Sbjct: 26 GGIIIPDTAKEKPQEATVIAVGPGKLDENGKRIPIEVKKGDKVLISKYGGTEVKIDGESF 85

Query: 76 HLFKEADLLAVIE 88
           + +E D+LA+IE
Sbjct: 86 QILREDDILAIIE 98

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Methylacidiphilum infernorum (isolate V4) (taxid: 481448)

>sp|Q96539|CH10_BRANA 10 kDa chaperonin OS=Brassica napus PE=3 SV=1

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 54/74 (72%), Gaps = 1/74 (1%)

Query: 17 GVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELH 76
          G+L+PEKA + +N+  V+AVGPG+R  +G+ I   V  GD VLLP++GGT++++  +E H
Sbjct: 26 GILLPEKASK-LNSGKVIAVGPGSRDKDGKLIPVSVKEGDTVLLPEYGGTQVKLGEKEYH 84

Query: 77 LFKEADLLAVIEKD 90
          LF++ D+L  + +D
Sbjct: 85 LFRDEDVLGTLHED 98

Seems to function only as a co-chaperone, along with cpn60, and in certain cases is essential for the discharge of biologically active proteins from cpn60.

Brassica napus (taxid: 3708)

>sp|Q9Z463|CH10_PARDE 10 kDa chaperonin OS=Paracoccus denitrificans GN=groS PE=3 SV=1

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 50/72 (69%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IP+ A+++     + +VG GAR  +GE I P V  GD+VL  K+ GT++ V+G+EL
Sbjct: 23 GGLIIPDSAKEKPAEGEITSVGEGARKDSGELIAPAVKAGDRVLFGKWSGTEVTVDGEEL 82

Query: 76 HLFKEADLLAVI 87
           + KE+D+L +I
Sbjct: 83 LIMKESDILGII 94

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Paracoccus denitrificans (taxid: 266)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
321473721	101	hypothetical protein DAPPUDRAFT_209506 [	0.813	0.732	0.608	4e-18
242016119	109	10 kDa heat shock protein, putative [Ped	0.802	0.669	0.608	4e-17
357612773	103	putative 10 kDa heat shock protein [Dana	0.802	0.708	0.6	2e-16
241998156	101	heat shock protein [Ixodes scapularis] g	0.758	0.683	0.550	4e-16
390339575	103	PREDICTED: 10 kDa heat shock protein, mi	0.824	0.728	0.56	5e-16
91083979	103	PREDICTED: similar to AGAP001502-PA [Tri	0.769	0.679	0.619	7e-16
156541992	104	PREDICTED: 10 kDa heat shock protein, mi	0.802	0.701	0.567	7e-16
427786059	101	Putative mitochondrial chaperonin [Rhipi	0.769	0.693	0.557	1e-15
156405900	102	predicted protein [Nematostella vectensi	0.802	0.715	0.547	2e-15
423292354	105	10 kDa heat shock protein [Lygus hesperu	0.802	0.695	0.554	3e-15

>gi|321473721|gb|EFX84688.1| hypothetical protein DAPPUDRAFT_209506 [Daphnia pulex]

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 59/74 (79%)

Query: 16  GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
           GG++IPEKAQQ+V    VVAVGPG+RT  G+ +   V VGD VLLP++GGTK+E+E +E 
Sbjct: 28  GGIVIPEKAQQKVLKGTVVAVGPGSRTDKGDLVPLAVKVGDNVLLPEYGGTKVEIEDKEY 87

Query: 76  HLFKEADLLAVIEK 89
           HLF+E+DLLA IE+
Sbjct: 88  HLFRESDLLAKIEQ 101

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242016119|ref|XP_002428683.1| 10 kDa heat shock protein, putative [Pediculus humanus corporis] gi|212513354|gb|EEB15945.1| 10 kDa heat shock protein, putative [Pediculus humanus corporis]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 16  GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEV-EGQE 74
           GG++IPEKAQ +V +  VVAVGPG+R  NGE+I   V VGDKVLLP++GGTK+E+ E +E
Sbjct: 36  GGIVIPEKAQSKVLHGTVVAVGPGSRNQNGEFIPLAVKVGDKVLLPEYGGTKVELEENKE 95

Query: 75  LHLFKEADLLAVIE 88
            HLF+E+D+LA +E
Sbjct: 96  FHLFRESDILAKVE 109

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357612773|gb|EHJ68162.1| putative 10 kDa heat shock protein [Danaus plexippus]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 61/75 (81%), Gaps = 2/75 (2%)

Query: 16  GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--Q 73
           GG++IPEKAQ +V +  VVAVGPG+R  NGE+I  +V+VGDKVLLP++GGTK+ +E   +
Sbjct: 28  GGIVIPEKAQSKVLHGEVVAVGPGSRKENGEFIPVLVSVGDKVLLPEYGGTKVSLENDEK 87

Query: 74  ELHLFKEADLLAVIE 88
           E HLF+E+D+LA IE
Sbjct: 88  EYHLFRESDILAKIE 102

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241998156|ref|XP_002433721.1| heat shock protein [Ixodes scapularis] gi|51011554|gb|AAT92186.1| heat shock protein 10 [Ixodes pacificus] gi|215495480|gb|EEC05121.1| heat shock protein [Ixodes scapularis]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 56/69 (81%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IPEKAQ +V +A V+AVG GART  G+ I P V  GDKVLLP++GGTK+E++ +E 
Sbjct: 28 GGIMIPEKAQAKVQSATVIAVGTGARTEAGQTIPPAVKAGDKVLLPEYGGTKVEIDNKEF 87

Query: 76 HLFKEADLL 84
          ++F+++D+L
Sbjct: 88 YIFRDSDVL 96

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390339575|ref|XP_003725038.1| PREDICTED: 10 kDa heat shock protein, mitochondrial-like isoform 2 [Strongylocentrotus purpuratus] gi|390339577|ref|XP_001198018.2| PREDICTED: 10 kDa heat shock protein, mitochondrial-like isoform 1 [Strongylocentrotus purpuratus]

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 57/75 (76%)

Query: 16  GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
           GG++IPEKAQQ+VN A VVAVG G+R  +G   K  V+VGDKVLLP+FGGTK+  E +E 
Sbjct: 28  GGIMIPEKAQQKVNQATVVAVGAGSRDSSGSVHKVAVDVGDKVLLPEFGGTKVAFEEKEY 87

Query: 76  HLFKEADLLAVIEKD 90
            +F+E D+L V+ ++
Sbjct: 88  FIFREGDILGVLNEE 102

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|91083979|ref|XP_975179.1| PREDICTED: similar to AGAP001502-PA [Tribolium castaneum] gi|270006714|gb|EFA03162.1| hypothetical protein TcasGA2_TC013081 [Tribolium castaneum]

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 55/71 (77%), Gaps = 1/71 (1%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEV-EGQE 74
          GG++IPEKAQ +V    VVAVGPGAR  NGE +   V VGD VLLP++GGTK+E+ E QE
Sbjct: 29 GGIVIPEKAQAKVLQGTVVAVGPGARNNNGETVPLTVKVGDNVLLPEYGGTKVELEENQE 88

Query: 75 LHLFKEADLLA 85
           HLF+E+D+LA
Sbjct: 89 YHLFRESDILA 99

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156541992|ref|XP_001599992.1| PREDICTED: 10 kDa heat shock protein, mitochondrial-like [Nasonia vitripennis]

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 58/74 (78%), Gaps = 1/74 (1%)

Query: 16  GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEV-EGQE 74
           GG++IPEKAQ +V    VVA+GPG+R   GE+I P + VGD VLLP++GGTK+E+ E +E
Sbjct: 30  GGIVIPEKAQGKVLRGTVVAIGPGSRNDKGEHIPPSIKVGDVVLLPEYGGTKVELEENKE 89

Query: 75  LHLFKEADLLAVIE 88
            HLF+E+D+LA +E
Sbjct: 90  FHLFRESDILAKLE 103

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427786059|gb|JAA58481.1| Putative mitochondrial chaperonin [Rhipicephalus pulchellus]

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 57/70 (81%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IPEKAQ +V++A VVAVGPG RT +G+ I   V  GDKVLLP++GGTK+E+E +E 
Sbjct: 28 GGIMIPEKAQAKVHSATVVAVGPGGRTESGQTIPIAVKEGDKVLLPEYGGTKVEIENKEF 87

Query: 76 HLFKEADLLA 85
          ++F+++D+L 
Sbjct: 88 YIFRDSDVLG 97

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156405900|ref|XP_001640969.1| predicted protein [Nematostella vectensis] gi|156228106|gb|EDO48906.1| predicted protein [Nematostella vectensis]

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 55/73 (75%)

Query: 16  GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
           GGVL+PEK Q +V    VVA+GPGAR  +G+++   VNVGDKVLLP++GGTKI V+ +E 
Sbjct: 28  GGVLLPEKGQSKVLEGTVVAIGPGARDKDGKHVPMSVNVGDKVLLPEYGGTKINVDDKEY 87

Query: 76  HLFKEADLLAVIE 88
           H++++ DLL   E
Sbjct: 88  HIYRDGDLLGKFE 100

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|423292354|gb|AFX84557.1| 10 kDa heat shock protein [Lygus hesperus]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/74 (55%), Positives = 58/74 (78%), Gaps = 1/74 (1%)

Query: 16  GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEV-EGQE 74
           GG++IPEK+Q +V +  VVAVGPG+R   G+ + P V+VGD VLLP++GGTK+E+ E +E
Sbjct: 31  GGIVIPEKSQGKVLHGTVVAVGPGSRNTKGDLVPPQVSVGDHVLLPEYGGTKVEIEENKE 90

Query: 75  LHLFKEADLLAVIE 88
            HLF+E D+LA +E
Sbjct: 91  YHLFRETDILAKLE 104

Source: Lygus hesperus

Species: Lygus hesperus

Genus: Lygus

Family: Miridae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
ZFIN|ZDB-GENE-000906-2	100	hspe1 "heat shock 10 protein 1	0.758	0.69	0.449	7.1e-13
UNIPROTKB|F1NGP9	101	HSPE1 "Uncharacterized protein	0.747	0.673	0.5	1.2e-12
UNIPROTKB|O42283	102	HSPE1 "Uncharacterized protein	0.747	0.666	0.5	1.2e-12
WB|WBGene00021248	108	Y22D7AL.10 [Caenorhabditis ele	0.780	0.657	0.436	1.5e-12
FB|FBgn0036334	103	CG11267 [Drosophila melanogast	0.802	0.708	0.460	2.4e-12
FB|FBgn0038200	102	CG9920 [Drosophila melanogaste	0.802	0.715	0.426	1.7e-11
UNIPROTKB|J9P3C8	102	HSPE1 "Uncharacterized protein	0.747	0.666	0.428	2.2e-11
MGI|MGI:104680	102	Hspe1 "heat shock protein 1 (c	0.747	0.666	0.428	2.2e-11
UNIPROTKB|P61603	102	HSPE1 "10 kDa heat shock prote	0.747	0.666	0.428	2.8e-11
UNIPROTKB|E2QUS9	102	COQ10B "Uncharacterized protei	0.747	0.666	0.428	2.8e-11

ZFIN|ZDB-GENE-000906-2 hspe1 "heat shock 10 protein 1 (chaperonin 10)" [Danio rerio (taxid:7955)]

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 31/69 (44%), Positives = 47/69 (68%)

Query:    16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
             GG++IPEK+Q +         GPG+   +G+ I   V VGDKVLLP++GGTK+ +E ++ 
Sbjct:    27 GGIMIPEKSQAKVLQATVVAVGPGSTNKDGKVIPVCVKVGDKVLLPEYGGTKVMLEDKDY 86

Query:    76 HLFKEADLL 84
              LF++AD+L
Sbjct:    87 FLFRDADIL 95

GO:0005737 "cytoplasm" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

UNIPROTKB|F1NGP9 HSPE1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 35/70 (50%), Positives = 49/70 (70%)

Query:    16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPV-VNVGDKVLLPKFGGTKIEVEGQE 74
             GG++IPEKAQ +         G GAR  +GE I PV V VG+KVLLP++GGTKI +E ++
Sbjct:    28 GGIMIPEKAQGKVLQATVVAVGSGARGKDGE-IHPVSVKVGEKVLLPEYGGTKIVLEDKD 86

Query:    75 LHLFKEADLL 84
              +LF++ D+L
Sbjct:    87 YYLFRDGDIL 96

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

UNIPROTKB|O42283 HSPE1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 35/70 (50%), Positives = 49/70 (70%)

Query:    16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPV-VNVGDKVLLPKFGGTKIEVEGQE 74
             GG++IPEKAQ +         G GAR  +GE I PV V VG+KVLLP++GGTKI +E ++
Sbjct:    29 GGIMIPEKAQGKVLQATVVAVGSGARGKDGE-IHPVSVKVGEKVLLPEYGGTKIVLEDKD 87

Query:    75 LHLFKEADLL 84
              +LF++ D+L
Sbjct:    88 YYLFRDGDIL 97

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISS

WB|WBGene00021248 Y22D7AL.10 [Caenorhabditis elegans (taxid:6239)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 31/71 (43%), Positives = 45/71 (63%)

Query:    16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
             GG+++PEK+Q +         G G R   GE +   V  GD+VLLP++GGTK+ VE +E 
Sbjct:    36 GGIMLPEKSQGKVLEATVVSAGAGLRNEKGELVALTVKPGDRVLLPEYGGTKVVVEDKEY 95

Query:    76 HLFKEADLLAV 86
              +F+E+DLL V
Sbjct:    96 SIFRESDLLGV 106

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

FB|FBgn0036334 CG11267 [Drosophila melanogaster (taxid:7227)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 35/76 (46%), Positives = 50/76 (65%)

Query:    16 GGVLIPEKAQQEXXXXXXXXXGPGARTPN-GEYIKPVVNVGDKVLLPKFGGTKIEVEG-- 72
             GG+++PEKA  +         GPG R  + G +I   V  GD+VLLP+FGGTK+ +EG  
Sbjct:    28 GGIVLPEKAVGKVLEGTVLAVGPGTRNASTGNHIPIGVKEGDRVLLPEFGGTKVNLEGDQ 87

Query:    73 QELHLFKEADLLAVIE 88
             +EL LF+E+D+LA +E
Sbjct:    88 KELFLFRESDILAKLE 103

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006458 "'de novo' protein folding" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0005811 "lipid particle" evidence=IDA

FB|FBgn0038200 CG9920 [Drosophila melanogaster (taxid:7227)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 32/75 (42%), Positives = 50/75 (66%)

Query:    16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGE-YIKPVVNVGDKVLLPKFGGTKIEVEGQ- 73
             GG+L+PE++  +         GPGAR P G  ++   V  GD+VLLPK+GGTK++++ + 
Sbjct:    28 GGILLPEESVPKEMQGVVVAVGPGARNPAGAGHLSVGVKEGDRVLLPKYGGTKVDMDDKR 87

Query:    74 ELHLFKEADLLAVIE 88
             E  LF+E+D+LA +E
Sbjct:    88 EYVLFRESDILAKLE 102

GO:0006457 "protein folding" evidence=ISS

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0006458 "'de novo' protein folding" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

UNIPROTKB|J9P3C8 HSPE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/70 (42%), Positives = 48/70 (68%)

Query:    16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPV-VNVGDKVLLPKFGGTKIEVEGQE 74
             GG+++PEK+Q +         G G++   GE I+PV V VGDKVLLP++GGTK+ ++ ++
Sbjct:    29 GGIMLPEKSQGKVSQATVVAVGSGSKGKGGE-IQPVSVKVGDKVLLPEYGGTKVVLDDKD 87

Query:    75 LHLFKEADLL 84
               LF++ D+L
Sbjct:    88 YFLFRDGDIL 97

GO:0006457 "protein folding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

MGI|MGI:104680 Hspe1 "heat shock protein 1 (chaperonin 10)" [Mus musculus (taxid:10090)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/70 (42%), Positives = 49/70 (70%)

Query:    16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPV-VNVGDKVLLPKFGGTKIEVEGQE 74
             GG+++PEK+Q +         G G +  +GE I+PV V VGDKVLLP++GGTK+ ++ ++
Sbjct:    29 GGIMLPEKSQGKVLQATVVAVGSGGKGKSGE-IEPVSVKVGDKVLLPEYGGTKVVLDDKD 87

Query:    75 LHLFKEADLL 84
               LF+++D+L
Sbjct:    88 YFLFRDSDIL 97

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005759 "mitochondrial matrix" evidence=ISO

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0051087 "chaperone binding" evidence=ISO

UNIPROTKB|P61603 HSPE1 "10 kDa heat shock protein, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 30/70 (42%), Positives = 48/70 (68%)

Query:    16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPV-VNVGDKVLLPKFGGTKIEVEGQE 74
             GG+++PEK+Q +         G G++   GE I+PV V VGDKVLLP++GGTK+ ++ ++
Sbjct:    29 GGIMLPEKSQGKVLQATVVAVGSGSKGKGGE-IQPVSVKVGDKVLLPEYGGTKVVLDDKD 87

Query:    75 LHLFKEADLL 84
               LF++ D+L
Sbjct:    88 YFLFRDGDIL 97

GO:0051087 "chaperone binding" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2QUS9 COQ10B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 30/70 (42%), Positives = 48/70 (68%)

Query:    16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPV-VNVGDKVLLPKFGGTKIEVEGQE 74
             GG+++PEK+Q +         G G++   GE I+PV V VGDKVLLP++GGTK+ ++ ++
Sbjct:    29 GGIMLPEKSQGKVLQATVVAVGSGSKGKGGE-IQPVSVKVGDKVLLPEYGGTKVVLDDKD 87

Query:    75 LHLFKEADLL 84
               LF++ D+L
Sbjct:    88 YFLFRDGDIL 97

GO:0006457 "protein folding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P35864	CH103_BRAJA	No assigned EC number	0.3888	0.7912	0.6923	yes	N/A
Q98IV4	CH101_RHILO	No assigned EC number	0.4189	0.8131	0.7115	yes	N/A
P34893	CH10_ARATH	No assigned EC number	0.4324	0.8021	0.7448	yes	N/A
Q5LV16	CH10_RUEPO	No assigned EC number	0.4520	0.8021	0.7684	yes	N/A
P0CAU0	CH10_CAUCR	No assigned EC number	0.4383	0.8021	0.7604	yes	N/A
C5CPP9	CH10_VARPS	No assigned EC number	0.4520	0.8021	0.7604	yes	N/A
B1ZAU6	CH10_METPB	No assigned EC number	0.4166	0.7912	0.75	yes	N/A
Q031S9	CH10_LACLS	No assigned EC number	0.4109	0.8021	0.7765	yes	N/A
A5G9I1	CH10_GEOUR	No assigned EC number	0.5	0.8131	0.7708	yes	N/A
B6IU97	CH10_RHOCS	No assigned EC number	0.3947	0.8351	0.7378	yes	N/A
Q2GCC7	CH10_NOVAD	No assigned EC number	0.4305	0.7912	0.7578	yes	N/A
Q747C8	CH10_GEOSL	No assigned EC number	0.4520	0.8021	0.7684	yes	N/A
B1LVA1	CH10_METRJ	No assigned EC number	0.4166	0.7912	0.75	yes	N/A
P60367	CH102_RHOPA	No assigned EC number	0.4166	0.7912	0.6923	yes	N/A
Q9Z463	CH10_PARDE	No assigned EC number	0.4305	0.7912	0.7578	yes	N/A
P30780	CH10_AGRT5	No assigned EC number	0.4027	0.7912	0.7346	yes	N/A
Q1GJ37	CH10_RUEST	No assigned EC number	0.4444	0.7912	0.7578	yes	N/A
A4WUL6	CH10_RHOS5	No assigned EC number	0.4166	0.7912	0.7578	yes	N/A
A8LJQ0	CH10_DINSH	No assigned EC number	0.4166	0.7912	0.6990	yes	N/A
B9LZ36	CH10_GEOSF	No assigned EC number	0.4864	0.8131	0.7708	yes	N/A
B8ER19	CH10_METSB	No assigned EC number	0.4027	0.7912	0.7578	yes	N/A
B5ZRD7	CH10_RHILW	No assigned EC number	0.375	0.7912	0.7346	yes	N/A
P37283	CH10_LACLA	No assigned EC number	0.4109	0.8021	0.7765	yes	N/A
B2ICU3	CH10_BEII9	No assigned EC number	0.4027	0.7912	0.7578	yes	N/A
P35474	CH105_RHIME	No assigned EC number	0.4324	0.7912	0.6923	yes	N/A
B2A5V2	CH10_NATTJ	No assigned EC number	0.4305	0.7912	0.7578	yes	N/A
P38910	CH10_YEAST	No assigned EC number	0.4736	0.8241	0.7075	yes	N/A
Q4FPA6	CH10_PELUB	No assigned EC number	0.3908	0.9010	0.8541	yes	N/A
A5G1G3	CH10_ACICJ	No assigned EC number	0.3972	0.8021	0.7019	yes	N/A
B3DZP6	CH10_METI4	No assigned EC number	0.4383	0.8021	0.7373	yes	N/A
A2SCV0	CH10_METPP	No assigned EC number	0.4246	0.8021	0.7604	yes	N/A
B0SXR3	CH10_CAUSK	No assigned EC number	0.4109	0.8021	0.7604	yes	N/A
A1TKQ6	CH10_ACIAC	No assigned EC number	0.4520	0.8021	0.7604	yes	N/A
A7HQQ1	CH10_PARL1	No assigned EC number	0.4383	0.8021	0.6952	yes	N/A
Q9AEP8	CH10_LACLM	No assigned EC number	0.4109	0.8021	0.7765	yes	N/A
P95677	CH10_RHOCA	No assigned EC number	0.4305	0.7912	0.7578	yes	N/A
Q39ZP6	CH10_GEOMG	No assigned EC number	0.4383	0.8021	0.7684	yes	N/A
Q28LY6	CH10_JANSC	No assigned EC number	0.4166	0.7912	0.7578	yes	N/A
B8H164	CH10_CAUCN	No assigned EC number	0.4383	0.8021	0.7604	yes	N/A
A9BXL2	CH10_DELAS	No assigned EC number	0.4657	0.8021	0.7604	yes	N/A
A1W3W9	CH10_ACISJ	No assigned EC number	0.4520	0.8021	0.7604	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	91
smart00883	93	smart00883, Cpn10, Chaperonin 10 Kd subunit	6e-26
cd00320	93	cd00320, cpn10, Chaperonin 10 Kd subunit (cpn10 or	2e-25
PRK00364	95	PRK00364, groES, co-chaperonin GroES; Reviewed	9e-22
COG0234	96	COG0234, GroS, Co-chaperonin GroES (HSP10) [Posttr	3e-21
pfam00166	91	pfam00166, Cpn10, Chaperonin 10 Kd subunit	1e-19
PTZ00414	100	PTZ00414, PTZ00414, 10 kDa heat shock protein; Pro	4e-15
PRK14533	91	PRK14533, groES, co-chaperonin GroES; Provisional	2e-06

>gnl|CDD|197951 smart00883, Cpn10, Chaperonin 10 Kd subunit

 Score = 91.3 bits (228), Expect = 6e-26
 Identities = 34/72 (47%), Positives = 52/72 (72%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IP+ A+++     VVAVGPG R  NGE +   V VGDKVL  K+ GT+++++G+E 
Sbjct: 22 GGIVIPDTAKEKPQEGEVVAVGPGKRLENGERVPLDVKVGDKVLFGKYAGTEVKLDGEEY 81

Query: 76 HLFKEADLLAVI 87
           + +E+D+LAVI
Sbjct: 82 LILRESDILAVI 93

The chaperonins are 'helper' molecules required for correct folding and subsequent assembly of some proteins. These are required for normal cell growth, and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions. Type I chaperonins present in eubacteria, mitochondria and chloroplasts require the concerted action of 2 proteins, chaperonin 60 (cpn60) and chaperonin 10 (cpn10). The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between six to eight identical subunits, while the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The central cavity of the cylindrical cpn60 tetradecamer provides as isolated environment for protein folding whilst cpn-10 binds to cpn-60 and synchronizes the release of the folded protein in an Mg2+-ATP dependent manner. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. Length = 93

>gnl|CDD|238197 cd00320, cpn10, Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts

 Score = 89.9 bits (224), Expect = 2e-25
 Identities = 34/72 (47%), Positives = 53/72 (73%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG+++P+ A+++     VVAVGPG R  NGE +   V VGDKVL PK+ GT+++++G+E 
Sbjct: 22 GGIILPDSAKEKPQEGKVVAVGPGRRNENGERVPLSVKVGDKVLFPKYAGTEVKLDGEEY 81

Query: 76 HLFKEADLLAVI 87
           + +E+D+LAVI
Sbjct: 82 LILRESDILAVI 93

It forms heptameric rings with a dome-like structure, forming a lid to the large cavity of the tetradecameric cpn60 cylinder and thereby tightly regulating release and binding of proteins to the cpn60 surface. Length = 93

>gnl|CDD|178988 PRK00364, groES, co-chaperonin GroES; Reviewed

 Score = 80.9 bits (201), Expect = 9e-22
 Identities = 32/73 (43%), Positives = 53/73 (72%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG+++P+ A+++     VVAVGPG R  NGE +   V VGDKVL  K+ GT+++++G+E 
Sbjct: 23 GGIVLPDSAKEKPQEGEVVAVGPGRRLDNGERVPLDVKVGDKVLFGKYAGTEVKIDGEEY 82

Query: 76 HLFKEADLLAVIE 88
           + +E+D+LA++E
Sbjct: 83 LILRESDILAIVE 95

Length = 95

>gnl|CDD|223312 COG0234, GroS, Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones]

 Score = 79.5 bits (197), Expect = 3e-21
 Identities = 32/75 (42%), Positives = 53/75 (70%)

Query: 15 PGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQE 74
           GG+++P+ A+++     VVAVGPG R  NGE +   V VGD+VL  K+ GT+++++G+E
Sbjct: 22 AGGIVLPDSAKEKPQEGEVVAVGPGRRDENGELVPLDVKVGDRVLFGKYAGTEVKIDGEE 81

Query: 75 LHLFKEADLLAVIEK 89
            +  E+D+LA++EK
Sbjct: 82 YLILSESDILAIVEK 96

Length = 96

>gnl|CDD|201050 pfam00166, Cpn10, Chaperonin 10 Kd subunit

 Score = 75.7 bits (187), Expect = 1e-19
 Identities = 37/73 (50%), Positives = 54/73 (73%), Gaps = 1/73 (1%)

Query: 15 PGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQE 74
           GG+++P+ A+++ N   VVAVGPGAR  NGE +   V VGDKVL PK+ GT+++++G+E
Sbjct: 20 KGGIILPDSAKEKPNQGEVVAVGPGARN-NGEDVPLEVKVGDKVLFPKYAGTEVKIDGEE 78

Query: 75 LHLFKEADLLAVI 87
            + KE D+LAVI
Sbjct: 79 YLILKEKDILAVI 91

This family contains GroES and Gp31-like chaperonins. Gp31 is a functional co-chaperonin that is required for the folding and assembly of Gp23, a major capsid protein, during phage morphogenesis. Length = 91

>gnl|CDD|173604 PTZ00414, PTZ00414, 10 kDa heat shock protein; Provisional

 Score = 64.2 bits (156), Expect = 4e-15
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 5/72 (6%)

Query: 17 GVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELH 76
          GVLIPE+   +VN   VVAV    +        P V VGD VLLP+FGG+ ++VEG+E  
Sbjct: 33 GVLIPEQVAGKVNEGTVVAVAAATKD-----WTPTVKVGDTVLLPEFGGSSVKVEGEEFF 87

Query: 77 LFKEADLLAVIE 88
          L+ E  LL V++
Sbjct: 88 LYNEDSLLGVLQ 99

Length = 100

>gnl|CDD|184730 PRK14533, groES, co-chaperonin GroES; Provisional

 Score = 41.8 bits (98), Expect = 2e-06
 Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 5/73 (6%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG+++P+ A+++   A VVAVG   +  + E     + VGDKV+  K+ GT+I+++ ++ 
Sbjct: 23 GGIVLPDSAKEKPMKAEVVAVG---KLDDEEDFD--IKVGDKVIFSKYAGTEIKIDDEDY 77

Query: 76 HLFKEADLLAVIE 88
           +    D+LA IE
Sbjct: 78 IIIDVNDILAKIE 90

Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	91
COG0234	96	GroS Co-chaperonin GroES (HSP10) [Posttranslationa	100.0
PRK00364	95	groES co-chaperonin GroES; Reviewed	99.98
cd00320	93	cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); C	99.97
PTZ00414	100	10 kDa heat shock protein; Provisional	99.97
PRK14533	91	groES co-chaperonin GroES; Provisional	99.97
PF00166	93	Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR0208	99.96
KOG1641|consensus	104		99.93
KOG1197|consensus	336		93.78
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	93.52
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	91.68
PF08140	40	Cuticle_1: Crustacean cuticle protein repeat; Inte	91.03
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	89.6
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	88.32
KOG0025|consensus	354		87.06
COG4384	203	Mu-like prophage protein gp45 [Function unknown]	86.39
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	86.2
PF06890	162	Phage_Mu_Gp45: Bacteriophage Mu Gp45 protein; Inte	84.41
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	83.1
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	83.08
KOG0022|consensus	375		81.9
PLN02586	360	probable cinnamyl alcohol dehydrogenase	80.59

>COG0234 GroS Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=4.8e-34  Score=187.13  Aligned_cols=84  Identities=38%  Similarity=0.727  Sum_probs=81.0

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA   85 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla   85 (91)
                      +++++|++|+|||+||++|++|++.|+|||||+|..+.+|+++|++||+||+|+|++|+|+++++||++|++++++||||
T Consensus        13 k~~e~EekT~gGIvlpdsakeK~~~g~VvAVG~G~~~~~g~~~~~~VkvGD~Vlf~ky~G~evk~dgeeylil~e~DILA   92 (96)
T COG0234          13 KRVEEEEKTAGGIVLPDSAKEKPQEGEVVAVGPGRRDENGELVPLDVKVGDRVLFGKYAGTEVKIDGEEYLILSESDILA   92 (96)
T ss_pred             EEchhhccccCcEEecCccccCCcceEEEEEccceecCCCCEeccccccCCEEEECccCCcEEEECCEEEEEechHHeeE
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Eeec
Q psy12488         86 VIEK   89 (91)
Q Consensus        86 vi~~   89 (91)
                      ++++
T Consensus        93 iv~~   96 (96)
T COG0234          93 IVEK   96 (96)
T ss_pred             EecC
Confidence            9874

>PRK00364 groES co-chaperonin GroES; Reviewed

Probab=99.98  E-value=3.4e-32  Score=177.99  Aligned_cols=83  Identities=40%  Similarity=0.731  Sum_probs=79.7

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA   85 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla   85 (91)
                      ++.+.+++|+|||+||+++++|++.|+|+|||||+.+.+|+++|++||+||+|+|++|+|++|++++++|+|+|++||||
T Consensus        13 ~~~~~e~~T~gGI~Lp~~a~~k~~~G~VvaVG~G~~~~~G~~~~~~vk~GD~Vlf~~~~g~ev~~~~~~y~iv~~~DIla   92 (95)
T PRK00364         13 KRLEEEEKTAGGIVLPDSAKEKPQEGEVVAVGPGRRLDNGERVPLDVKVGDKVLFGKYAGTEVKIDGEEYLILRESDILA   92 (95)
T ss_pred             EEcccCccccceEEcCccccCCcceEEEEEECCCeECCCCCEeecccCCCCEEEEcCCCCeEEEECCEEEEEEEHHHEEE
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Eee
Q psy12488         86 VIE   88 (91)
Q Consensus        86 vi~   88 (91)
                      +++
T Consensus        93 vi~   95 (95)
T PRK00364         93 IVE   95 (95)
T ss_pred             EeC
Confidence            985

>cd00320 cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts

Probab=99.97  E-value=3e-31  Score=172.82  Aligned_cols=82  Identities=41%  Similarity=0.782  Sum_probs=79.0

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA   85 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla   85 (91)
                      ++.+.+++|+|||+||++++++++.|+|+|||||+.+.+|++.|++|++||+|+|++|+|++|+++|++|+|+|++||||
T Consensus        12 ~~~~~e~~T~~GI~Lp~~~~~k~~~g~VvAVG~g~~~~~g~~~~~~vk~GD~Vl~~~~~g~~v~~~~~~y~i~~~~DIla   91 (93)
T cd00320          12 KRIEAEEKTKGGIILPDSAKEKPQEGKVVAVGPGRRNENGERVPLSVKVGDKVLFPKYAGTEVKLDGEEYLILRESDILA   91 (93)
T ss_pred             EEccccceecceEEeCCCcCCCceEEEEEEECCCeECCCCCCccccccCCCEEEECCCCceEEEECCEEEEEEEHHHEEE
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Ee
Q psy12488         86 VI   87 (91)
Q Consensus        86 vi   87 (91)
                      ++
T Consensus        92 ~i   93 (93)
T cd00320          92 VI   93 (93)
T ss_pred             EC
Confidence            85

It forms heptameric rings with a dome-like structure, forming a lid to the large cavity of the tetradecameric cpn60 cylinder and thereby tightly regulating release and binding of proteins to the cpn60 surface.

>PTZ00414 10 kDa heat shock protein; Provisional

Probab=99.97  E-value=1.8e-30  Score=171.76  Aligned_cols=78  Identities=42%  Similarity=0.726  Sum_probs=73.2

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA   85 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla   85 (91)
                      ++.+++++|+|||+||+++++|+++|+|+|||+|..+     .|++||+||+|+|++|+|++|+++|++|++++++||||
T Consensus        22 k~~~~e~kT~gGIiLP~sakekp~~g~VvAVG~G~~~-----~~~~Vk~GD~Vl~~~y~Gtevk~dg~ey~i~~e~DILa   96 (100)
T PTZ00414         22 KRTLAAKQTKAGVLIPEQVAGKVNEGTVVAVAAATKD-----WTPTVKVGDTVLLPEFGGSSVKVEGEEFFLYNEDSLLG   96 (100)
T ss_pred             EEcccccccccCEEcccccccCCceeEEEEECCCCcc-----ccceecCCCEEEEcCCCCcEEEECCEEEEEEEhHHEEE
Confidence            4567899999999999999999999999999999754     48899999999999999999999999999999999999


Q ss_pred             Eee
Q psy12488         86 VIE   88 (91)
Q Consensus        86 vi~   88 (91)
                      +++
T Consensus        97 vi~   99 (100)
T PTZ00414         97 VLQ   99 (100)
T ss_pred             Eec
Confidence            986

>PRK14533 groES co-chaperonin GroES; Provisional

Probab=99.97  E-value=2.7e-30  Score=168.32  Aligned_cols=79  Identities=30%  Similarity=0.482  Sum_probs=73.7

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA   85 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla   85 (91)
                      ++.+++++|+|||+||+++++|++.|+|+|||+|..     ..|++||+||+|+|++|+|++|+++|++|+|++++||||
T Consensus        13 k~~~~e~~T~gGI~Lp~~a~ek~~~G~VvavG~g~~-----~~~~~Vk~GD~Vl~~~y~g~ev~~~~~~y~iv~e~DILa   87 (91)
T PRK14533         13 KPIKEEKKTEGGIVLPDSAKEKPMKAEVVAVGKLDD-----EEDFDIKVGDKVIFSKYAGTEIKIDDEDYIIIDVNDILA   87 (91)
T ss_pred             EEccccceecccEEecccccCCcceEEEEEECCCCc-----cccccccCCCEEEEccCCCeEEEECCEEEEEEEhHhEEE
Confidence            456788999999999999999999999999999863     568999999999999999999999999999999999999


Q ss_pred             Eeec
Q psy12488         86 VIEK   89 (91)
Q Consensus        86 vi~~   89 (91)
                      +++|
T Consensus        88 ~i~~   91 (91)
T PRK14533         88 KIEE   91 (91)
T ss_pred             EeeC
Confidence            9975

>PF00166 Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR020818 The chaperonins are `helper' molecules required for correct folding and subsequent assembly of some proteins []

Probab=99.96  E-value=1.9e-29  Score=163.83  Aligned_cols=81  Identities=42%  Similarity=0.715  Sum_probs=75.0

Q ss_pred             ccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEEE
Q psy12488          7 KLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLAV   86 (91)
Q Consensus         7 k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIlav   86 (91)
                      +.+++++|+|||+||+++++++++|+|||||+|+.+.+|+.+|+.|++||+|+|++|+|++++++|++|+++|++||||+
T Consensus        13 ~~~~e~~T~~GiiLp~~~~~~~~~G~VvaVG~G~~~~~g~~~~~~vk~GD~Vl~~~~~g~~v~~~~~~~~~~~~~dIlav   92 (93)
T PF00166_consen   13 KIEAEEKTASGIILPESAKEKPNQGKVVAVGPGRYNENGEEVPMDVKVGDKVLFPKYAGTEVKFDGEKYLIVREDDILAV   92 (93)
T ss_dssp             ECSCTCTCTTSCCE-CCSSSSEEEEEEEEE-SEEETTTSSEEETSS-TTSEEEEETTTSEEEEETTEEEEEEEGGGEEEE
T ss_pred             EccccceecceEEeccccccccceeEEEEcCCccccCCCcEeeeeeeeccEEeccccCceEEEECCEEEEEEEHHHeEEE
Confidence            45779999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             e
Q psy12488         87 I   87 (91)
Q Consensus        87 i   87 (91)
                      +
T Consensus        93 i   93 (93)
T PF00166_consen   93 I   93 (93)
T ss_dssp             E
T ss_pred             C
Confidence            6

These are required for normal cell growth [], and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions. Type I chaperonins present in eubacteria, mitochondria and chloroplasts require the concerted action of 2 proteins, chaperonin 60 (cpn60) and chaperonin 10 (cpn10) []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between six to eight identical subunits, while the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The central cavity of the cylindrical cpn60 tetradecamer provides as isolated environment for protein folding whilst cpn-10 binds to cpn-60 and synchronizes the release of the folded protein in an Mg2+-ATP dependent manner []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. Escherichia coli GroES has also been shown to bind ATP cooperatively, and with an affinity comparable to that of GroEL []. Each GroEL subunit contains three structurally distinct domains: an apical, an intermediate and an equatorial domain. The apical domain contains the binding sites for both GroES and the unfolded protein substrate. The equatorial domain contains the ATP-binding site and most of the oligomeric contacts. The intermediate domain links the apical and equatorial domains and transfers allosteric information between them. The GroEL oligomer is a tetradecamer, cylindrically shaped, that is organised in two heptameric rings stacked back to back. Each GroEL ring contains a central cavity, known as the `Anfinsen cage', that provides an isolated environment for protein folding. The identical 10 kDa subunits of GroES form a dome-like heptameric oligomer in solution. ATP binding to GroES may be important in charging the seven subunits of the interacting GroEL ring with ATP, to facilitate cooperative ATP binding and hydrolysis for substrate protein release.; GO: 0006457 protein folding, 0005737 cytoplasm; PDB: 1PF9_Q 1AON_P 1SX4_T 1SVT_R 2C7D_P 1PCQ_O 2C7C_Q 1GRU_Q 1WNR_F 1P3H_I ....

>KOG1641|consensus

Probab=99.93  E-value=1.3e-26  Score=153.43  Aligned_cols=82  Identities=43%  Similarity=0.766  Sum_probs=77.7

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC-EEEEEEecCcEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG-QELHLFKEADLL   84 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg-~~y~ii~~~DIl   84 (91)
                      +|.+++++|+|||+||++++.|.++|+|+|||||.++..|+.+|.+|++||+|||++|+|++|++++ ++|+++|.+|+|
T Consensus        21 qr~~a~~KT~gGilLPEks~~K~~~g~VvavGpG~~~~~G~~v~~~Vk~Gd~VLlpeygGt~V~l~~~~~~~~fr~e~~l  100 (104)
T KOG1641|consen   21 QRIEAPTKTAGGILLPEKSVGKLLQGTVVAVGPGSRDKGGEIVPVSVKVGDRVLLPEYGGTKVKLGDEDEYHLFRDEDDL  100 (104)
T ss_pred             eeeeccccccceeEeccccccccceEEEEEEcCccccCCCCCcCccccCCCEEEeeccCCcEEeccCCceeEEecchhhh
Confidence            5678899999999999999999999999999999999999999999999999999999999999985 699999999999


Q ss_pred             EEe
Q psy12488         85 AVI   87 (91)
Q Consensus        85 avi   87 (91)
                      +.+
T Consensus       101 ~~~  103 (104)
T KOG1641|consen  101 LAI  103 (104)
T ss_pred             hhh
Confidence            875

>KOG1197|consensus

Probab=93.78  E-value=0.06  Score=41.97  Aligned_cols=27  Identities=41%  Similarity=0.478  Sum_probs=23.4

Q ss_pred             cceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         27 EVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        27 k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      +...|.|+|||.|..         +.++||+|.|-.
T Consensus        70 mEaaGvVvAvG~gvt---------drkvGDrVayl~   96 (336)
T KOG1197|consen   70 MEAAGVVVAVGEGVT---------DRKVGDRVAYLN   96 (336)
T ss_pred             cccceEEEEecCCcc---------ccccccEEEEec
Confidence            567899999999986         589999999854

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=93.52  E-value=0.078  Score=33.82  Aligned_cols=26  Identities=46%  Similarity=0.714  Sum_probs=21.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|....
T Consensus        38 E~~G~V~~vG~~v~---------~~~~Gd~V~~~~   63 (109)
T PF08240_consen   38 EGVGVVVAVGPGVT---------DFKVGDRVVVSP   63 (109)
T ss_dssp             EEEEEEEEESTTTT---------SSGTT-EEEEES
T ss_pred             ceeeeeeeeccccc---------cccccceeeeec
Confidence            47899999999875         599999999844

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=91.68  E-value=0.15  Score=40.62  Aligned_cols=23  Identities=43%  Similarity=0.683  Sum_probs=20.7

Q ss_pred             eeEEEEEEcCCeeCCCCeEecCcccCCCEEEc
Q psy12488         29 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL   60 (91)
Q Consensus        29 ~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf   60 (91)
                      -.|.|.+||+|..         +||+||+|+.
T Consensus        63 gAGiVe~VG~gVt---------~vkpGDhVI~   85 (366)
T COG1062          63 GAGIVEAVGEGVT---------SVKPGDHVIL   85 (366)
T ss_pred             cccEEEEecCCcc---------ccCCCCEEEE
Confidence            4799999999987         7999999985

>PF08140 Cuticle_1: Crustacean cuticle protein repeat; InterPro: IPR012539 This family consists of the cuticle proteins from the Cancer pagurus (Rock crab) and the Homarus americanus (American lobster)

Probab=91.03  E-value=0.27  Score=27.64  Aligned_cols=34  Identities=29%  Similarity=0.640  Sum_probs=23.3

Q ss_pred             ceeEEecCCccc--cceeEEEEEEcC-CeeCCCCeEe
Q psy12488         15 PGGVLIPEKAQQ--EVNNAVVVAVGP-GARTPNGEYI   48 (91)
Q Consensus        15 ~~GI~LP~~~~~--k~~~G~VVAVG~-G~~~~~G~~~   48 (91)
                      .|||+.|+...-  ..-.+.|+.+|| |....||+.+
T Consensus         2 ~SGii~~dG~~~q~~~~~a~ivl~GpSG~v~sdG~nv   38 (40)
T PF08140_consen    2 PSGIITPDGTNVQFPHGVANIVLIGPSGAVLSDGKNV   38 (40)
T ss_pred             CCceECCCCCEEECCcccceEEEECCceEEeeCCcEe
Confidence            489999998643  223337999999 6666666543

These proteins are isolated from the calcified regions of the crustacean and they contain two copies of an 18 residue sequence motif, which thus far has been found only in crustacean calcified exoskeletons [].; GO: 0042302 structural constituent of cuticle

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=89.60  E-value=0.49  Score=36.29  Aligned_cols=43  Identities=35%  Similarity=0.431  Sum_probs=30.2

Q ss_pred             cceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC-CCceEEEECC--EEEEEEecCcE
Q psy12488         27 EVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-FGGTKIEVEG--QELHLFKEADL   83 (91)
Q Consensus        27 k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~-y~g~ev~~dg--~~y~ii~~~DI   83 (91)
                      .-..|+|+|||++..         ..++||+|++.. ..     .+|  -+|..+.++.+
T Consensus        63 ~d~aG~V~avG~~V~---------~~~~GdrV~~~~~~~-----~~G~~AEy~~v~a~~~  108 (326)
T COG0604          63 SEAAGVVVAVGSGVT---------GFKVGDRVAALGGVG-----RDGGYAEYVVVPADWL  108 (326)
T ss_pred             ceeEEEEEEeCCCCC---------CcCCCCEEEEccCCC-----CCCcceeEEEecHHHc
Confidence            357899999999886         359999999984 21     122  56666666443

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=88.32  E-value=0.56  Score=34.27  Aligned_cols=30  Identities=23%  Similarity=0.312  Sum_probs=21.6

Q ss_pred             eeEEEEEEcCCeeC-CCCeEecCcccCCCEEEcCC
Q psy12488         29 NNAVVVAVGPGART-PNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        29 ~~G~VVAVG~G~~~-~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ..|+|+++|++... ..|.    .+++||+|....
T Consensus         6 ~~G~V~~vG~~v~~~~~~~----~~~~GdrV~~~~   36 (280)
T TIGR03366         6 IVGEVVALRGGFTPADDGV----PLRLGQRVVWSV   36 (280)
T ss_pred             cceEEEEeCCCccccccCC----CCCCCCEEEEcC
Confidence            57999999998641 1121    489999998754

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>KOG0025|consensus

Probab=87.06  E-value=1.5  Score=34.80  Aligned_cols=43  Identities=26%  Similarity=0.202  Sum_probs=29.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC-CCce---EEEECCEEEEEEe
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-FGGT---KIEVEGQELHLFK   79 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~-y~g~---ev~~dg~~y~ii~   79 (91)
                      .-.|+||+||++..         .+|+||+|+-.. --|+   +..+++.+++-+.
T Consensus        84 EGv~eVv~vGs~vk---------gfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd  130 (354)
T KOG0025|consen   84 EGVGEVVAVGSNVK---------GFKPGDWVIPLSANLGTWRTEAVFSESDLIKVD  130 (354)
T ss_pred             cceEEEEEecCCcC---------ccCCCCeEeecCCCCccceeeEeecccceEEcC
Confidence            46899999999765         499999999765 3354   3344555444443

>COG4384 Mu-like prophage protein gp45 [Function unknown]

Probab=86.39  E-value=2.7  Score=31.03  Aligned_cols=50  Identities=22%  Similarity=0.369  Sum_probs=35.1

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCC-------ceEEEECCEEEEEEecCcE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFG-------GTKIEVEGQELHLFKEADL   83 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~-------g~ev~~dg~~y~ii~~~DI   83 (91)
                      ...|.||++=      ++.+.|+-++.||+|+|..++       |..|.++-+.|.+....++
T Consensus        78 rShgviv~~~------~~syR~~GL~aGeT~iY~~eG~~i~Lteg~~Ie~~ck~~~v~a~~~v  134 (203)
T COG4384          78 RSHGVIVVSQ------HGSYRITGLKAGETVIYNHEGAKIVLTEGGIIEADCKTLTVNAATGV  134 (203)
T ss_pred             cceeEEEEec------CCccccccccCCceEEEeccCcEEEEccCcEEEEeccEEEEecCCce
Confidence            4455555554      566688899999999999876       4556677777776555443

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=86.20  E-value=0.86  Score=35.52  Aligned_cols=25  Identities=24%  Similarity=0.434  Sum_probs=21.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|.+.
T Consensus        68 E~~G~V~~vG~~V~---------~~~vGdrV~~~   92 (393)
T TIGR02819        68 EITGEVIEKGRDVE---------FIKIGDIVSVP   92 (393)
T ss_pred             eeEEEEEEEcCccc---------cccCCCEEEEe
Confidence            36999999999875         59999999875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PF06890 Phage_Mu_Gp45: Bacteriophage Mu Gp45 protein; InterPro: IPR014462 This entry is represented by the Bacteriophage Mu, Gp45

Probab=84.41  E-value=6.7  Score=27.88  Aligned_cols=40  Identities=23%  Similarity=0.265  Sum_probs=26.5

Q ss_pred             eEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCC
Q psy12488         17 GVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFG   64 (91)
Q Consensus        17 GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~   64 (91)
                      +|+||-.  -+...+.|+|+..++      +.|-.+++|+.++|.+.+
T Consensus        48 ~vvl~lG--G~rs~~Vvia~~d~~------yR~~~L~~GEvalY~~~G   87 (162)
T PF06890_consen   48 AVVLFLG--GDRSHGVVIAVEDRR------YRPKGLKPGEVALYDDEG   87 (162)
T ss_pred             EEEEEec--cCCcceEEEEeCCcc------ccccCCCCCcEEEEcCCC
Confidence            3555533  234567777776544      455679999999999765

The characteristics of the protein distribution suggest prophage matches.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=83.10  E-value=1.2  Score=33.50  Aligned_cols=24  Identities=33%  Similarity=0.358  Sum_probs=19.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++ .         .+++||+|+..
T Consensus        64 e~~G~V~~vG~~-~---------~~~vGdrV~~~   87 (355)
T cd08230          64 EALGVVEEVGDG-S---------GLSPGDLVVPT   87 (355)
T ss_pred             ccceEEEEecCC-C---------CCCCCCEEEec
Confidence            357999999997 4         58999999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=83.08  E-value=1.2  Score=35.11  Aligned_cols=25  Identities=36%  Similarity=0.432  Sum_probs=21.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|++||++..         .+|+||+|-..
T Consensus        64 EivG~V~~vG~~V~---------~~k~GDrVgV~   88 (339)
T COG1064          64 EIVGTVVEVGEGVT---------GLKVGDRVGVG   88 (339)
T ss_pred             ceEEEEEEecCCCc---------cCCCCCEEEec
Confidence            57899999999886         59999999983

>KOG0022|consensus

Probab=81.90  E-value=1.4  Score=35.24  Aligned_cols=23  Identities=35%  Similarity=0.583  Sum_probs=20.5

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVL   59 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vl   59 (91)
                      ...|.|.+||+|..         .|++||+|+
T Consensus        68 EaaGIVESvGegV~---------~vk~GD~Vi   90 (375)
T KOG0022|consen   68 EAAGIVESVGEGVT---------TVKPGDHVI   90 (375)
T ss_pred             cceeEEEEecCCcc---------ccCCCCEEe
Confidence            35899999999986         699999998

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=80.59  E-value=1.9  Score=32.88  Aligned_cols=24  Identities=21%  Similarity=0.318  Sum_probs=20.0

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEc
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL   60 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf   60 (91)
                      ...|+|+++|++..         .+++||+|++
T Consensus        73 E~~G~V~~vG~~v~---------~~~vGdrV~~   96 (360)
T PLN02586         73 EIVGIVTKLGKNVK---------KFKEGDRVGV   96 (360)
T ss_pred             ceeEEEEEECCCCC---------ccCCCCEEEE
Confidence            36899999999764         5899999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	91
3nx6_A	95	Crystal Structure Of Co-Chaperonin, Groes (Xoo4289)		4e-08
1wnr_A	94	Crystal Structure Of The Cpn10 From Thermus Thermop		2e-07
1we3_O	100	Crystal Structure Of The Chaperonin Complex Cpn60CP		2e-07
1lep_A	99	Three-Dimensional Structure Of The Immunodominant H		7e-07
1hx5_A	99	Crystal Structure Of M. Tuberculosis Chaperonin-10		8e-06

>pdb|3NX6|A Chain A, Crystal Structure Of Co-Chaperonin, Groes (Xoo4289) From Xanthomonas Oryzae Pv. Oryzae Kacc10331 Length = 95

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IP+ A+++         G G    NG    PVV VGDKV+  ++ G+  + EG E 
Sbjct: 23 GGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEY 82
Query: 76 HLFKEADLLAVI 87
           + +E D+LAVI
Sbjct: 83 KVLREDDILAVI 94

>pdb|1WNR|A Chain A, Crystal Structure Of The Cpn10 From Thermus Thermophilus Hb8 Length = 94

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 16 GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG+++P+ A+++         G G    NG+ +   V  GD V+  K+GGT+IE++G+E 
Sbjct: 22 GGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEY 81
Query: 76 HLFKEADLLAVIE 88
           +  E DLLAV++
Sbjct: 82 VILSERDLLAVLQ 94

>pdb|1WE3|O Chain O, Crystal Structure Of The Chaperonin Complex Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS Length = 100

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 16  GGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
           GG+++P+ A+++         G G    NG+ +   V  GD V+  K+GGT+IE++G+E 
Sbjct: 28  GGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEY 87
Query: 76  HLFKEADLLAVIE 88
            +  E DLLAV++
Sbjct: 88  VILSERDLLAVLQ 100

>pdb|1LEP|A Chain A, Three-Dimensional Structure Of The Immunodominant Heat- Shock Protein Chaperonin-10 Of Mycobacterium Leprae Length = 99

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 13 LFPGGVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPV-VNVGDKVLLPKFGGTKIEVE 71
          + P G++IPE A+++         GPG    +G    PV V+ GD V+  K+GGT+I+  
Sbjct: 22 MTPSGLVIPENAKEKPQEGTVVAVGPGRWDEDGAKRIPVDVSEGDIVIYSKYGGTEIKYN 81
Query: 72 GQELHLFKEADLLAVIEK 89
          G+E  +    D+LAV+ K
Sbjct: 82 GEEYLILSARDVLAVVSK 99

>pdb|1HX5|A Chain A, Crystal Structure Of M. Tuberculosis Chaperonin-10 Length = 99

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 17 GVLIPEKAQQEXXXXXXXXXGPGARTPNGEYIKPV-VNVGDKVLLPKFGGTKIEVEGQEL 75
          G++IP+ A+++         GPG    +GE   P+ V  GD V+  K+GGT+I+  G+E 
Sbjct: 26 GLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEY 85
Query: 76 HLFKEADLLAVIEK 89
           +    D+LAV+ K
Sbjct: 86 LILSARDVLAVVSK 99

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	91
1we3_O	100	CPN10(groes); chaperonin, chaperone, groel, HSP60,	4e-21
1p3h_A	99	10 kDa chaperonin; beta barrel, acidic cluster, fl	2e-20
3nx6_A	95	10KDA chaperonin; bacterial blight, XOO4289, groes	3e-20
1pcq_O	97	Groes protein; chaperone; HET: ADP; 2.81A {Escheri	7e-19

>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A Length = 100

 Score = 78.7 bits (195), Expect = 4e-21
 Identities = 29/73 (39%), Positives = 48/73 (65%)

Query: 16  GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
           GG+++P+ A+++     V+AVG G    NG+ +   V  GD V+  K+GGT+IE++G+E 
Sbjct: 28  GGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEY 87

Query: 76  HLFKEADLLAVIE 88
            +  E DLLAV++
Sbjct: 88  VILSERDLLAVLQ 100

>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A Length = 99

 Score = 76.8 bits (190), Expect = 2e-20
 Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPV-VNVGDKVLLPKFGGTKIEVEGQE 74
           G++IP+ A+++     VVAVGPG    +GE   P+ V  GD V+  K+GGT+I+  G+E
Sbjct: 25 SGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEE 84

Query: 75 LHLFKEADLLAVIEK 89
            +    D+LAV+ K
Sbjct: 85 YLILSARDVLAVVSK 99

>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} Length = 95

 Score = 76.4 bits (189), Expect = 3e-20
 Identities = 30/72 (41%), Positives = 45/72 (62%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG++IP+ A+++     VVA+G G    NG    PVV VGDKV+  ++ G+  + EG E 
Sbjct: 23 GGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEY 82

Query: 76 HLFKEADLLAVI 87
           + +E D+LAVI
Sbjct: 83 KVLREDDILAVI 94

>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O Length = 97

 Score = 72.9 bits (180), Expect = 7e-19
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF-GGTKIEVEGQE 74
          GG+++   A  +     V+AVG G    NGE     V VGD V+     G    +++ +E
Sbjct: 23 GGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEE 82

Query: 75 LHLFKEADLLAVIE 88
          + +  E+D+LA++E
Sbjct: 83 VLIMSESDILAIVE 96

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	91
3nx6_A	95	10KDA chaperonin; bacterial blight, XOO4289, groes	100.0
1p3h_A	99	10 kDa chaperonin; beta barrel, acidic cluster, fl	100.0
1pcq_O	97	Groes protein; chaperone; HET: ADP; 2.81A {Escheri	100.0
1we3_O	100	CPN10(groes); chaperonin, chaperone, groel, HSP60,	100.0
1g31_A	111	GP31; chaperone, CO-chaperonin, groes, in VIVO pro	99.84
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	92.54
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	92.44
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	92.4
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	92.35
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	91.93
3gms_A	340	Putative NADPH:quinone reductase; structural genom	90.42
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	90.36
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	89.69
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	89.59
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	89.41
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	89.35
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	89.29
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	89.29
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	89.24
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	89.15
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	89.08
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	89.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	88.88
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	88.86
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	88.85
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	88.79
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	88.78
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	88.74
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	88.66
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	88.61
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	88.57
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	88.48
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	88.46
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	88.41
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	88.4
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	88.39
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	88.36
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	88.29
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	88.27
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	88.23
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	88.18
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	88.17
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	88.06
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	87.97
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	87.86
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	87.83
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	87.79
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	87.67
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	87.66
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	87.41
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	87.41
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	87.3
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	87.24
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	87.21
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	86.87
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	86.85
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	86.76
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	85.88
3mlq_E	71	Transcription-repair coupling factor; tudor, trans	85.67
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	84.92
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	84.66
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	83.71
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	83.48
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	82.76
4eye_A	342	Probable oxidoreductase; structural genomics, niai	82.45

>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0

Probab=100.00  E-value=1.9e-35  Score=192.96  Aligned_cols=83  Identities=36%  Similarity=0.645  Sum_probs=61.8

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA   85 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla   85 (91)
                      ++.+++++|+|||+||++|++|+++|+|||||||+.+.+|+++|++||+||+|+|++|+|++|++||++|+++|++||||
T Consensus        13 k~~e~e~kT~gGI~LP~~a~eK~~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~dg~ey~i~re~DILa   92 (95)
T 3nx6_A           13 KPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILA   92 (95)
T ss_dssp             EEC-------------------CEEEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEETTEEEEEEEGGGEEE
T ss_pred             EEccccccccceEEeCccccCCccccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEECCEEEEEEEHHHEEE
Confidence            45778899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Eee
Q psy12488         86 VIE   88 (91)
Q Consensus        86 vi~   88 (91)
                      +++
T Consensus        93 vie   95 (95)
T 3nx6_A           93 VIG   95 (95)
T ss_dssp             ECC
T ss_pred             EeC
Confidence            984

>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A

Probab=100.00  E-value=3.4e-35  Score=193.03  Aligned_cols=84  Identities=35%  Similarity=0.577  Sum_probs=80.7

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCC-eEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNG-EYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G-~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ++.+++++|+|||+||+++++|+++|+|||||||+++++| +++|++||+||+|+|++|+|++|++||++|+++|++|||
T Consensus        15 k~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~dgeey~i~re~DIl   94 (99)
T 1p3h_A           15 QANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVL   94 (99)
T ss_dssp             EECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEETTEEEEEEEGGGEE
T ss_pred             EEccccccccceEEeCcccccCCceEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEECCEEEEEEEhHhEE
Confidence            4678899999999999999999999999999999999999 999999999999999999999999999999999999999


Q ss_pred             EEeec
Q psy12488         85 AVIEK   89 (91)
Q Consensus        85 avi~~   89 (91)
                      |++++
T Consensus        95 avi~~   99 (99)
T 1p3h_A           95 AVVSK   99 (99)
T ss_dssp             EEEEC
T ss_pred             EEeeC
Confidence            99874

>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O

Probab=100.00  E-value=7.9e-35  Score=190.67  Aligned_cols=83  Identities=28%  Similarity=0.473  Sum_probs=80.3

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC-CCceEEEECCEEEEEEecCcEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-FGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~-y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ++.+++++|+|||+||+++++|+++|+|||||||+.+++|+++|++||+||+|+|++ |+|++|++||++|+++|++|||
T Consensus        13 k~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~dgeey~i~re~DIl   92 (97)
T 1pcq_O           13 KRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDIL   92 (97)
T ss_dssp             EECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEETTEEEEEEEGGGEE
T ss_pred             EEccccccccceEEeCcccccCCcccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEECCEEEEEEEhHHEE
Confidence            467889999999999999999999999999999999999999999999999999999 9999999999999999999999


Q ss_pred             EEee
Q psy12488         85 AVIE   88 (91)
Q Consensus        85 avi~   88 (91)
                      |+++
T Consensus        93 avv~   96 (97)
T 1pcq_O           93 AIVE   96 (97)
T ss_dssp             EEEE
T ss_pred             EEec
Confidence            9987

>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A

Probab=100.00  E-value=4.6e-35  Score=192.70  Aligned_cols=83  Identities=35%  Similarity=0.638  Sum_probs=80.0

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA   85 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla   85 (91)
                      ++.+.+++|+|||+||+++++|+++|+|||||||+++++|+++|++||+||+|+|++|+|++|++||++|+++|++||||
T Consensus        18 k~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~dgeeyli~re~DIla   97 (100)
T 1we3_O           18 KRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEYVILSERDLLA   97 (100)
T ss_dssp             EECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEECSSCEEEEECTTTEEE
T ss_pred             EEccccccccceEEeCcccccCCcCCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEEEECCEEEEEEEhHHEEE
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Eee
Q psy12488         86 VIE   88 (91)
Q Consensus        86 vi~   88 (91)
                      +++
T Consensus        98 vi~  100 (100)
T 1we3_O           98 VLQ  100 (100)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            985

>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O

Probab=99.84  E-value=6e-23  Score=137.06  Aligned_cols=73  Identities=18%  Similarity=0.177  Sum_probs=65.4

Q ss_pred             ccceecceeEEecCC-ccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC--CC--------ceEEEECC--EEE
Q psy12488          9 SIYLLFPGGVLIPEK-AQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK--FG--------GTKIEVEG--QEL   75 (91)
Q Consensus         9 ~~e~~T~~GI~LP~~-~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~--y~--------g~ev~~dg--~~y   75 (91)
                      ..|++|+|||+||++ +++||+.|+|||||+|+       .|+.||+||+|+|++  |+        +.+++.++  ++|
T Consensus        26 ~~E~kT~sGIilp~~aakekp~~g~VvAVG~g~-------~~~~vKvGD~Vl~~kg~~~nvp~p~vi~g~i~~~~~~e~y   98 (111)
T 1g31_A           26 GDEEVTESGLIIGKRVQGEVPELCVVHSVGPDV-------PEGFCEVGDLTSLPVGQIRNVPHPFVALGLKQPKEIKQKF   98 (111)
T ss_dssp             GGCTTSCTTCCCCHHHHHHSEEEEEEEEECTTS-------CTTSCCTTCEEEEEGGGCEEECCHHHHTTSSCGGGCCCCE
T ss_pred             CcceEcCCcEEeCCCccccCCceEEEEEECCCC-------ccccccCCCEEEECCCccccCCCcceeeeEEccCCcccEE
Confidence            378999999999999 69999999999999997       356899999999944  77        78999998  999


Q ss_pred             EEEecCcEEEEee
Q psy12488         76 HLFKEADLLAVIE   88 (91)
Q Consensus        76 ~ii~~~DIlavi~   88 (91)
                      ++++++||||++.
T Consensus        99 ~i~~~~dIlavy~  111 (111)
T 1g31_A           99 VTCHYKAIPCLYK  111 (111)
T ss_dssp             EEEEGGGCCEECC
T ss_pred             EEEehHHeEEEeC
Confidence            9999999999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=92.54  E-value=0.053  Score=39.60  Aligned_cols=26  Identities=38%  Similarity=0.560  Sum_probs=21.6

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|.+..
T Consensus        64 E~~G~V~~vG~~v~---------~~~vGdrV~~~~   89 (343)
T 2eih_A           64 DGSGVVDAVGPGVE---------GFAPGDEVVINP   89 (343)
T ss_dssp             EEEEEEEEECSSCC---------SCCTTCEEEECC
T ss_pred             ceEEEEEEECCCCC---------CCCCCCEEEECC
Confidence            46899999999864         599999999643

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=92.44  E-value=0.23  Score=36.38  Aligned_cols=42  Identities=33%  Similarity=0.416  Sum_probs=30.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|+.....      +|  .+|++++++.+.
T Consensus        91 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~------~G~~aey~~v~~~~~~  134 (357)
T 1zsy_A           91 EGVAQVVAVGSNVT---------GLKPGDWVIPANAG------LGTWRTEAVFSEEALI  134 (357)
T ss_dssp             CCEEEEEEECTTCC---------SCCTTCEEEESSSC------SCCSBSEEEEEGGGEE
T ss_pred             eEEEEEEEeCCCCC---------CCCCCCEEEEcCCC------CccceeEEecCHHHcE
Confidence            46899999999864         59999999875421      12  467777766543

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=92.40  E-value=0.19  Score=36.39  Aligned_cols=37  Identities=24%  Similarity=0.229  Sum_probs=27.2

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEe
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFK   79 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~   79 (91)
                      ...|+|+++|++..         .+++||+|.+...++      =.+|+.++
T Consensus        70 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~G~------~aey~~v~  106 (334)
T 3qwb_A           70 EASGTVVAKGKGVT---------NFEVGDQVAYISNST------FAQYSKIS  106 (334)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEECSSC------SBSEEEEE
T ss_pred             ceEEEEEEECCCCC---------CCCCCCEEEEeeCCc------ceEEEEec
Confidence            46899999999864         599999998643221      14677777

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=92.35  E-value=0.24  Score=36.62  Aligned_cols=25  Identities=32%  Similarity=0.464  Sum_probs=21.2

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|+..
T Consensus        69 E~~G~V~~vG~~v~---------~~~vGdrV~~~   93 (378)
T 3uko_A           69 EAAGIVESVGEGVT---------EVQAGDHVIPC   93 (378)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             cceEEEEEeCCCCC---------cCCCCCEEEEe
Confidence            46899999999875         59999999854

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=91.93  E-value=0.3  Score=35.66  Aligned_cols=42  Identities=21%  Similarity=0.287  Sum_probs=29.8

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|......      +|  .+|++++++.+.
T Consensus        79 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~------~G~~aey~~v~~~~~~  122 (364)
T 1gu7_A           79 EGLFEVIKVGSNVS---------SLEAGDWVIPSHVN------FGTWRTHALGNDDDFI  122 (364)
T ss_dssp             CCEEEEEEECTTCC---------SCCTTCEEEESSSC------CCCSBSEEEEEGGGEE
T ss_pred             eeEEEEEEeCCCCC---------cCCCCCEEEecCCC------CCcchheEecCHHHeE
Confidence            36899999999874         59999999865311      11  567777766543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=90.42  E-value=0.3  Score=35.47  Aligned_cols=43  Identities=23%  Similarity=0.123  Sum_probs=30.2

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|+.....|.     =.+|++++++.+.
T Consensus        69 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~  111 (340)
T 3gms_A           69 EGVGIVENVGAFVS---------RELIGKRVLPLRGEGT-----WQEYVKTSADFVV  111 (340)
T ss_dssp             CCEEEEEEECTTSC---------GGGTTCEEEECSSSCS-----SBSEEEEEGGGEE
T ss_pred             ceEEEEEEeCCCCC---------CCCCCCEEEecCCCcc-----ceeEEEcCHHHeE
Confidence            46899999999874         6999999984321111     0567777776654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=90.36  E-value=0.3  Score=35.82  Aligned_cols=43  Identities=35%  Similarity=0.436  Sum_probs=30.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|..-...|.     =.+|+.++++.+.
T Consensus        92 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~  134 (353)
T 4dup_A           92 ELSGEIVGVGPGVS---------GYAVGDKVCGLANGGA-----YAEYCLLPAGQIL  134 (353)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred             ccEEEEEEECCCCC---------CCCCCCEEEEecCCCc-----eeeEEEEcHHHcE
Confidence            36899999999875         5999999985322210     1577777776654

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=89.69  E-value=0.27  Score=36.00  Aligned_cols=25  Identities=32%  Similarity=0.585  Sum_probs=21.5

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|++||++..         .+++||+|...
T Consensus        79 E~~G~V~~vG~~v~---------~~~vGdrV~~~  103 (363)
T 3m6i_A           79 ESAGEVIAVHPSVK---------SIKVGDRVAIE  103 (363)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence            46899999999875         59999999974

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=89.59  E-value=0.37  Score=35.15  Aligned_cols=43  Identities=16%  Similarity=0.102  Sum_probs=29.6

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|+.....|.     =.+|++++++.+.
T Consensus        67 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~G~-----~aey~~v~~~~~~  109 (349)
T 4a27_A           67 ECSGIVEALGDSVK---------GYEIGDRVMAFVNYNA-----WAEVVCTPVEFVY  109 (349)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred             eeEEEEEEeCCCCC---------CCCCCCEEEEecCCCc-----ceEEEEecHHHeE
Confidence            46899999999874         5999999985332211     1467777766543

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=89.41  E-value=0.29  Score=35.36  Aligned_cols=42  Identities=31%  Similarity=0.359  Sum_probs=29.4

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCC-CceEEEECCEEEEEEecCcE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF-GGTKIEVEGQELHLFKEADL   83 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y-~g~ev~~dg~~y~ii~~~DI   83 (91)
                      ...|+|+++|++..         .+++||+|.+... .|.     =.+|+.++++.+
T Consensus        67 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~G~-----~aey~~v~~~~~  109 (333)
T 1wly_A           67 EAAAVVEEVGPGVT---------DFTVGERVCTCLPPLGA-----YSQERLYPAEKL  109 (333)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEECSSSCCC-----SBSEEEEEGGGC
T ss_pred             eeEEEEEEECCCCC---------CCCCCCEEEEecCCCCc-----ceeEEEecHHHc
Confidence            46899999999874         5999999976432 110     146777776554

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=89.35  E-value=0.29  Score=35.56  Aligned_cols=25  Identities=52%  Similarity=0.663  Sum_probs=21.5

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        64 E~~G~V~~vG~~v~---------~~~vGdrV~~~   88 (343)
T 2dq4_A           64 EFSGVVEAVGPGVR---------RPQVGDHVSLE   88 (343)
T ss_dssp             EEEEEEEEECTTCC---------SSCTTCEEEEC
T ss_pred             cceEEEEEECCCCC---------cCCCCCEEEEC
Confidence            46899999999874         69999999974

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=89.29  E-value=0.3  Score=35.60  Aligned_cols=25  Identities=24%  Similarity=0.400  Sum_probs=21.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        65 E~~G~V~~vG~~v~---------~~~vGdrV~~~   89 (348)
T 3two_A           65 EIAGIIKEVGKGVK---------KFKIGDVVGVG   89 (348)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             ceeEEEEEECCCCC---------CCCCCCEEEEe
Confidence            47899999999875         59999999763

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=89.29  E-value=0.39  Score=35.68  Aligned_cols=42  Identities=17%  Similarity=0.082  Sum_probs=30.2

Q ss_pred             ceeEEEEEEcCCe-eCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGA-RTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~-~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++. .         .+++||+|.....++      =.+|++++++.++
T Consensus        97 e~~G~V~~vG~~v~~---------~~~vGdrV~~~~~G~------~aey~~v~~~~~~  139 (379)
T 3iup_A           97 EGAGVVVEAGSSPAA---------QALMGKTVAAIGGAM------YSQYRCIPADQCL  139 (379)
T ss_dssp             CEEEEEEEECSSHHH---------HTTTTCEEEECCSCC------SBSEEEEEGGGEE
T ss_pred             eeEEEEEEeCCCccc---------CCCCCCEEEecCCCc------ceeEEEeCHHHeE
Confidence            4689999999985 3         589999999854321      1577777766543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=89.24  E-value=0.38  Score=35.43  Aligned_cols=42  Identities=24%  Similarity=0.150  Sum_probs=28.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADL   83 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DI   83 (91)
                      ...|+|+++|++...        .+++||+|.....++      =.+|++++++.+
T Consensus        90 E~~G~V~~vG~~V~~--------~~~vGdrV~~~~~G~------~aey~~v~~~~~  131 (362)
T 2c0c_A           90 EGIGEVVALGLSASA--------RYTVGQAVAYMAPGS------FAEYTVVPASIA  131 (362)
T ss_dssp             EEEEEEEEECTTGGG--------TCCTTCEEEEECSCC------SBSEEEEEGGGC
T ss_pred             eeEEEEEEECCCccC--------CCCCCCEEEEccCCc------ceeEEEEcHHHe
Confidence            468999999997631        489999998753211      046777766544

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=89.15  E-value=0.31  Score=35.85  Aligned_cols=25  Identities=32%  Similarity=0.663  Sum_probs=21.4

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        66 E~~G~V~~vG~~v~---------~~~~GdrV~~~   90 (371)
T 1f8f_A           66 EGSGIIEAIGPNVT---------ELQVGDHVVLS   90 (371)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             ccceEEEEeCCCCC---------CCCCCCEEEec
Confidence            46899999999874         59999999964

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=89.08  E-value=0.32  Score=35.14  Aligned_cols=25  Identities=24%  Similarity=0.445  Sum_probs=21.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        61 E~aG~V~~vG~~V~---------~~~~GdrV~~~   85 (348)
T 4eez_A           61 EGIGIVKEIGADVS---------SLQVGDRVSVA   85 (348)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEE
T ss_pred             eEEEEEEEECceee---------ecccCCeEeec
Confidence            46899999999875         69999999864

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=89.00  E-value=0.32  Score=35.42  Aligned_cols=26  Identities=35%  Similarity=0.532  Sum_probs=21.8

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|....
T Consensus        68 E~~G~V~~vG~~v~---------~~~vGdrV~~~~   93 (348)
T 2d8a_A           68 EVAGEVVEIGPGVE---------GIEVGDYVSVET   93 (348)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred             cceEEEEEECCCCC---------cCCCCCEEEEcC
Confidence            46899999999874         599999999753

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=88.88  E-value=0.33  Score=35.83  Aligned_cols=25  Identities=40%  Similarity=0.399  Sum_probs=21.1

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|.+.
T Consensus        77 E~~G~V~~vG~~V~---------~~~vGDrV~~~  101 (366)
T 1yqd_A           77 EIVGEVTEVGSKVK---------KVNVGDKVGVG  101 (366)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             ceEEEEEEECCCCC---------cCCCCCEEEEc
Confidence            46899999999875         59999999853

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=88.86  E-value=0.33  Score=35.71  Aligned_cols=25  Identities=32%  Similarity=0.530  Sum_probs=21.5

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        69 E~~G~V~~vG~~V~---------~~~vGdrV~~~   93 (374)
T 1cdo_A           69 EGAGIVESVGPGVT---------EFQPGEKVIPL   93 (374)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             cceEEEEEECCCCc---------cCCCCCEEEeC
Confidence            46899999999874         59999999875

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=88.85  E-value=0.33  Score=35.62  Aligned_cols=25  Identities=32%  Similarity=0.271  Sum_probs=21.1

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|.+.
T Consensus        70 E~~G~V~~vG~~v~---------~~~vGdrV~~~   94 (357)
T 2cf5_A           70 EVVGEVVEVGSDVS---------KFTVGDIVGVG   94 (357)
T ss_dssp             EEEEEEEEECSSCC---------SCCTTCEEEEC
T ss_pred             ceeEEEEEECCCCC---------CCCCCCEEEEc
Confidence            46899999999874         59999999853

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=88.79  E-value=0.34  Score=35.48  Aligned_cols=25  Identities=24%  Similarity=0.417  Sum_probs=21.4

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        70 E~~G~V~~vG~~V~---------~~~vGdrV~~~   94 (356)
T 1pl8_A           70 EASGTVEKVGSSVK---------HLKPGDRVAIE   94 (356)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence            47899999999874         59999999874

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=88.78  E-value=0.33  Score=36.66  Aligned_cols=26  Identities=35%  Similarity=0.441  Sum_probs=21.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|++||++..         .+++||+|....
T Consensus       116 E~~G~V~~vG~~V~---------~~~vGDrV~~~~  141 (447)
T 4a0s_A          116 DCSGVVVRTGIGVR---------RWKPGDHVIVHP  141 (447)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             ceeEEEEEECCCCC---------CCCCCCEEEEec
Confidence            36899999999875         599999999753

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=88.74  E-value=0.34  Score=35.62  Aligned_cols=26  Identities=35%  Similarity=0.434  Sum_probs=21.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|....
T Consensus        69 E~~G~V~~vG~~v~---------~~~vGdrV~~~~   94 (373)
T 1p0f_A           69 EAVGVVESIGAGVT---------CVKPGDKVIPLF   94 (373)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             CceEEEEEECCCCC---------ccCCCCEEEECC
Confidence            47899999999874         599999998753

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=88.66  E-value=0.35  Score=35.09  Aligned_cols=26  Identities=27%  Similarity=0.335  Sum_probs=21.8

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|....
T Consensus        63 e~~G~V~~vG~~v~---------~~~vGdrV~~~~   88 (345)
T 3jv7_A           63 EGVGTVAELGEGVT---------GFGVGDAVAVYG   88 (345)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred             ccEEEEEEECCCCC---------CCCCCCEEEEec
Confidence            46899999999874         599999998743

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=88.61  E-value=0.36  Score=34.63  Aligned_cols=44  Identities=18%  Similarity=0.274  Sum_probs=30.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|......    ..+|  .+|++++++.+.
T Consensus        65 e~~G~V~~vG~~v~---------~~~vGdrV~~~~~~----~~~G~~aey~~v~~~~~~  110 (315)
T 3goh_A           65 DGAGVIVKVGAKVD---------SKMLGRRVAYHTSL----KRHGSFAEFTVLNTDRVM  110 (315)
T ss_dssp             EEEEEEEEECTTSC---------GGGTTCEEEEECCT----TSCCSSBSEEEEETTSEE
T ss_pred             eeEEEEEEeCCCCC---------CCCCCCEEEEeCCC----CCCcccccEEEEcHHHhc
Confidence            46899999999874         59999999974310    0012  577777777644

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=88.57  E-value=0.36  Score=35.22  Aligned_cols=25  Identities=28%  Similarity=0.462  Sum_probs=21.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        67 E~~G~V~~vG~~v~---------~~~vGdrV~~~   91 (352)
T 1e3j_A           67 EASGTVVKVGKNVK---------HLKKGDRVAVE   91 (352)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             cceEEEEEeCCCCC---------CCCCCCEEEEc
Confidence            46899999999864         59999999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=88.48  E-value=0.36  Score=35.39  Aligned_cols=26  Identities=27%  Similarity=0.463  Sum_probs=21.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|....
T Consensus        67 E~~G~V~~vG~~V~---------~~~vGdrV~~~~   92 (373)
T 2fzw_A           67 LGAGIVESVGEGVT---------KLKAGDTVIPLY   92 (373)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             cccEEEEEECCCCC---------CCCCCCEEEECC
Confidence            47899999999874         599999998753

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=88.46  E-value=0.36  Score=35.50  Aligned_cols=25  Identities=36%  Similarity=0.505  Sum_probs=21.4

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        68 E~~G~V~~vG~~v~---------~~~vGdrV~~~   92 (376)
T 1e3i_A           68 ECAGIVESVGPGVT---------NFKPGDKVIPF   92 (376)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             cccEEEEEECCCCc---------cCCCCCEEEEC
Confidence            47899999999874         59999999874

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=88.41  E-value=0.37  Score=35.76  Aligned_cols=25  Identities=24%  Similarity=0.385  Sum_probs=21.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        68 E~~G~V~~vG~~v~---------~~~vGDrV~~~   92 (398)
T 1kol_A           68 EITGEVIEKGRDVE---------NLQIGDLVSVP   92 (398)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEECC
T ss_pred             ccEEEEEEECCCCC---------cCCCCCEEEEC
Confidence            47899999999874         59999999863

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=88.40  E-value=0.37  Score=35.44  Aligned_cols=26  Identities=31%  Similarity=0.438  Sum_probs=21.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|....
T Consensus        68 E~~G~V~~vG~~v~---------~~~vGdrV~~~~   93 (374)
T 2jhf_A           68 EAAGIVESIGEGVT---------TVRPGDKVIPLF   93 (374)
T ss_dssp             SEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             CceEEEEEECCCCC---------CCCCCCEEEECC
Confidence            46899999999874         599999998753

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=88.39  E-value=0.63  Score=34.05  Aligned_cols=43  Identities=23%  Similarity=0.332  Sum_probs=29.6

Q ss_pred             ceeEEEEEEcCCe-eCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGA-RTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~-~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++. .         .+++||+|......|.     =.+|++++++.+.
T Consensus        86 E~~G~V~~vG~~v~~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~  129 (354)
T 2j8z_A           86 EASGHVAELGPGCQG---------HWKIGDTAMALLPGGG-----QAQYVTVPEGLLM  129 (354)
T ss_dssp             EEEEEEEEECSCC-----------CCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred             eeEEEEEEECCCcCC---------CCCCCCEEEEecCCCc-----ceeEEEeCHHHcE
Confidence            4679999999986 3         5899999986432211     1577777776543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=88.36  E-value=0.38  Score=34.85  Aligned_cols=24  Identities=38%  Similarity=0.452  Sum_probs=20.5

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEc
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL   60 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf   60 (91)
                      ...|+|+++|++..         .+++||+|.+
T Consensus        64 E~~G~V~~vG~~v~---------~~~vGdrV~~   87 (340)
T 3s2e_A           64 EGVGYVSAVGSGVS---------RVKEGDRVGV   87 (340)
T ss_dssp             EEEEEEEEECSSCC---------SCCTTCEEEE
T ss_pred             cceEEEEEECCCCC---------cCCCCCEEEe
Confidence            47899999999875         5999999954

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=88.29  E-value=0.39  Score=34.65  Aligned_cols=43  Identities=35%  Similarity=0.429  Sum_probs=30.6

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC-CCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-FGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~-y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|.+.. ..|.     =.+|+.++++.+.
T Consensus        64 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~G~-----~aey~~v~~~~~~  107 (325)
T 3jyn_A           64 EGAGVVEAVGDEVT---------RFKVGDRVAYGTGPLGA-----YSEVHVLPEANLV  107 (325)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEESSSSSCC-----SBSEEEEEGGGEE
T ss_pred             eeEEEEEEECCCCC---------CCCCCCEEEEecCCCcc-----ccceEEecHHHeE
Confidence            46899999999874         599999998754 1111     1467777776644

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=88.27  E-value=0.38  Score=35.82  Aligned_cols=25  Identities=28%  Similarity=0.477  Sum_probs=21.4

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        67 E~~G~V~~vG~~v~---------~~~vGDrV~~~   91 (398)
T 2dph_A           67 EITGEVVEKGSDVE---------LMDIGDLVSVP   91 (398)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEECC
T ss_pred             ceEEEEEEECCCCC---------CCCCCCEEEEc
Confidence            46899999999874         59999999964

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=88.23  E-value=0.39  Score=34.55  Aligned_cols=44  Identities=23%  Similarity=0.243  Sum_probs=30.6

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC-C---CceEEEECCEEEEEEecCcEEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-F---GGTKIEVEGQELHLFKEADLLA   85 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~-y---~g~ev~~dg~~y~ii~~~DIla   85 (91)
                      ...|+|+++|++..         .+++||+|+... +   .|.     =.+|++++++.++-
T Consensus        74 E~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~~~~G~-----~aey~~v~~~~~~~  121 (321)
T 3tqh_A           74 DFSGEVIELGSDVN---------NVNIGDKVMGIAGFPDHPCC-----YAEYVCASPDTIIQ  121 (321)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEECSTTTCCCC-----SBSEEEECGGGEEE
T ss_pred             eeEEEEEEeCCCCC---------CCCCCCEEEEccCCCCCCCc-----ceEEEEecHHHhcc
Confidence            46899999999874         699999998532 2   121     15677777766543

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=88.18  E-value=0.39  Score=35.46  Aligned_cols=44  Identities=30%  Similarity=0.355  Sum_probs=30.4

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|++....    ..+|  .+|++++++.+.
T Consensus        88 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~----~~~G~~aey~~v~~~~~~  133 (363)
T 4dvj_A           88 DAAGIVSAVGPDVT---------LFRPGDEVFYAGSI----IRPGTNAEFHLVDERIVG  133 (363)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEECCCT----TSCCSCBSEEEEEGGGCE
T ss_pred             eeEEEEEEeCCCCC---------CCCCCCEEEEccCC----CCCccceEEEEeCHHHee
Confidence            46899999999874         59999999974310    0012  577777776543

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=88.17  E-value=0.4  Score=34.92  Aligned_cols=25  Identities=24%  Similarity=0.340  Sum_probs=21.1

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        67 E~~G~V~~vG~~v~---------~~~~GdrV~~~   91 (347)
T 2hcy_A           67 EGAGVVVGMGENVK---------GWKIGDYAGIK   91 (347)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             cceEEEEEECCCCC---------CCcCCCEEEEe
Confidence            46899999999874         59999999863

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=88.06  E-value=0.4  Score=34.94  Aligned_cols=25  Identities=32%  Similarity=0.510  Sum_probs=21.4

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|++||++..         .+++||+|...
T Consensus        60 E~~G~V~~vG~~v~---------~~~vGdrV~~~   84 (352)
T 3fpc_A           60 EAVGEVVEVGSEVK---------DFKPGDRVVVP   84 (352)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             cceEEEEEECCCCC---------cCCCCCEEEEc
Confidence            47899999999874         69999999964

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=87.97  E-value=0.41  Score=35.20  Aligned_cols=25  Identities=32%  Similarity=0.376  Sum_probs=21.5

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        90 E~~G~V~~vG~~v~---------~~~vGDrV~~~  114 (363)
T 3uog_A           90 DMSGVVEAVGKSVT---------RFRPGDRVIST  114 (363)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence            46899999999874         59999999975

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=87.86  E-value=0.39  Score=36.55  Aligned_cols=24  Identities=33%  Similarity=0.558  Sum_probs=20.9

Q ss_pred             eeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         29 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        29 ~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ..|+|+++|++..         .+++||+|+..
T Consensus       125 ~~G~Vv~vG~~v~---------~~~vGdrV~~~  148 (456)
T 3krt_A          125 LAGVVLRTGPGVN---------AWQAGDEVVAH  148 (456)
T ss_dssp             CEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             eEEEEEEECCCCC---------CCCCCCEEEEe
Confidence            6799999999875         59999999974

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=87.83  E-value=0.43  Score=34.80  Aligned_cols=44  Identities=27%  Similarity=0.277  Sum_probs=30.4

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|++.....    .+|  .+|++++++.+.
T Consensus        66 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~----~~G~~aey~~v~~~~~~  111 (346)
T 3fbg_A           66 DAIGVVESVGNEVT---------MFNQGDIVYYSGSPD----QNGSNAEYQLINERLVA  111 (346)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEECCCTT----SCCSSBSEEEEEGGGEE
T ss_pred             ccEEEEEEeCCCCC---------cCCCCCEEEEcCCCC----CCcceeEEEEEChHHeE
Confidence            46899999999874         599999999743210    012  577777766543

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=87.79  E-value=0.43  Score=34.68  Aligned_cols=25  Identities=40%  Similarity=0.705  Sum_probs=21.2

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        62 E~~G~V~~vG~~v~---------~~~vGdrV~~~   86 (339)
T 1rjw_A           62 EGVGIVEEVGPGVT---------HLKVGDRVGIP   86 (339)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             cceEEEEEECCCCC---------cCCCCCEEEEe
Confidence            47899999999864         58999999864

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=87.67  E-value=0.43  Score=35.34  Aligned_cols=25  Identities=32%  Similarity=0.177  Sum_probs=21.2

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        83 E~~G~V~~vG~~V~---------~~~vGDrV~~~  107 (369)
T 1uuf_A           83 EIVGRVVAVGDQVE---------KYAPGDLVGVG  107 (369)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             CceEEEEEECCCCC---------CCCCCCEEEEc
Confidence            47899999999874         59999999863

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=87.66  E-value=0.44  Score=35.13  Aligned_cols=44  Identities=18%  Similarity=0.205  Sum_probs=30.6

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|.......    .+|  .+|++++++.+.
T Consensus       101 E~~G~V~~vG~~V~---------~~~vGDrV~~~~~~~----~~G~~aey~~v~~~~~~  146 (375)
T 2vn8_A          101 DVSGVVMECGLDVK---------YFKPGDEVWAAVPPW----KQGTLSEFVVVSGNEVS  146 (375)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEECCTT----SCCSSBSEEEEEGGGEE
T ss_pred             eeeEEEEEeCCCCC---------CCCCCCEEEEecCCC----CCccceeEEEEcHHHee
Confidence            47899999999874         699999998643110    012  577777776553

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=87.41  E-value=0.47  Score=34.07  Aligned_cols=43  Identities=21%  Similarity=0.334  Sum_probs=29.7

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC-CCCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP-KFGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~-~y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|.+. ...|.     =.+|++++++.+.
T Consensus        64 E~~G~V~~vG~~v~---------~~~~GdrV~~~g~~~G~-----~aey~~v~~~~~~  107 (327)
T 1qor_A           64 EAAGIVSKVGSGVK---------HIKAGDRVVYAQSALGA-----YSSVHNIIADKAA  107 (327)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEESCCSSCC-----SBSEEEEEGGGEE
T ss_pred             eeEEEEEEECCCCC---------CCCCCCEEEECCCCCce-----eeeEEEecHHHcE
Confidence            47899999999874         59999999654 11110     1577777776543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=87.41  E-value=0.47  Score=34.53  Aligned_cols=24  Identities=21%  Similarity=0.135  Sum_probs=20.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEc
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL   60 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf   60 (91)
                      ...|+|+++|++..         .+++||+|+.
T Consensus        69 e~~G~V~~vG~~v~---------~~~vGdrV~~   92 (347)
T 1jvb_A           69 EIAGKIEEVGDEVV---------GYSKGDLVAV   92 (347)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEE
T ss_pred             cceEEEEEECCCCC---------CCCCCCEEEe
Confidence            46899999999874         6999999964

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=87.30  E-value=0.47  Score=34.80  Aligned_cols=25  Identities=28%  Similarity=0.379  Sum_probs=20.7

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|+..
T Consensus        80 E~~G~V~~vG~~v~---------~~~vGdrV~~~  104 (359)
T 1h2b_A           80 ENVGYIEEVAEGVE---------GLEKGDPVILH  104 (359)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             CceEEEEEECCCCC---------CCCCCCEEEeC
Confidence            46899999999874         59999999643

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=87.24  E-value=0.48  Score=35.07  Aligned_cols=25  Identities=20%  Similarity=0.266  Sum_probs=21.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        82 e~~G~V~~vG~~v~---------~~~vGdrV~~~  106 (370)
T 4ej6_A           82 EFCGIVVEAGSAVR---------DIAPGARITGD  106 (370)
T ss_dssp             SEEEEEEEECTTCC---------SSCTTCEEEEC
T ss_pred             ceEEEEEEECCCCC---------CCCCCCEEEEC
Confidence            46899999999874         59999999874

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=87.21  E-value=0.49  Score=34.52  Aligned_cols=46  Identities=28%  Similarity=0.286  Sum_probs=30.6

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|..-.....  ..+|  .+|++++++.+.
T Consensus        70 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~g~~--~~~G~~aey~~v~~~~~~  117 (343)
T 3gaz_A           70 DLAGTVVAVGPEVD---------SFRVGDAVFGLTGGVG--GLQGTHAQFAAVDARLLA  117 (343)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEECCSST--TCCCSSBSEEEEEGGGEE
T ss_pred             ceEEEEEEECCCCC---------CCCCCCEEEEEeCCCC--CCCcceeeEEEecHHHee
Confidence            46899999999874         5999999986321000  0122  577777776544

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=86.87  E-value=0.48  Score=34.80  Aligned_cols=43  Identities=26%  Similarity=0.305  Sum_probs=30.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCC-CceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF-GGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y-~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|..... .|.     =.+|++++++.+.
T Consensus        94 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~-----~aey~~v~~~~~~  137 (351)
T 1yb5_A           94 DVAGVIEAVGDNAS---------AFKKGDRVFTSSTISGG-----YAEYALAADHTVY  137 (351)
T ss_dssp             CEEEEEEEECTTCT---------TCCTTCEEEESCCSSCS-----SBSEEEEEGGGEE
T ss_pred             eeEEEEEEECCCCC---------CCCCCCEEEEeCCCCCc-----ceeEEEECHHHeE
Confidence            46899999999864         5999999987542 111     1577777765543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=86.85  E-value=0.52  Score=35.19  Aligned_cols=30  Identities=27%  Similarity=0.346  Sum_probs=22.0

Q ss_pred             ceeEEEEEEcCCeeCC-CCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTP-NGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~-~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++.... .+    ..+++||+|+..
T Consensus        98 E~~G~V~~vG~~v~~~~~~----~~~~vGdrV~~~  128 (404)
T 3ip1_A           98 EFSGVVVEAGPEAINRRTN----KRFEIGEPVCAE  128 (404)
T ss_dssp             EEEEEEEEECTTCEETTTT----EECCTTCEEEEC
T ss_pred             cceEEEEEECCCccccccC----CCCCCCCEEEEC
Confidence            4689999999987211 11    169999999974

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=86.76  E-value=0.54  Score=34.17  Aligned_cols=24  Identities=33%  Similarity=0.416  Sum_probs=20.0

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++ .         .+++||+|+..
T Consensus        66 E~~G~V~~vG~~-~---------~~~~GdrV~~~   89 (344)
T 2h6e_A           66 ENAGTIVEVGEL-A---------KVKKGDNVVVY   89 (344)
T ss_dssp             CEEEEEEEECTT-C---------CCCTTCEEEEC
T ss_pred             cceEEEEEECCC-C---------CCCCCCEEEEC
Confidence            468999999997 4         59999999653

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=85.88  E-value=0.37  Score=35.12  Aligned_cols=44  Identities=20%  Similarity=0.129  Sum_probs=30.0

Q ss_pred             ceeEEEEEEcCCe-eCCCCeEecCcccCCCEEEcCCCCceEEEECC--EEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGA-RTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~-~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg--~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++. .         .+++||+|......    ..+|  .+|++++++.+.
T Consensus        86 E~~G~V~~vG~~v~~---------~~~vGdrV~~~~g~----~~~G~~aey~~v~~~~~~  132 (349)
T 3pi7_A           86 EGVGTIVAGGDEPYA---------KSLVGKRVAFATGL----SNWGSWAEYAVAEAAACI  132 (349)
T ss_dssp             EEEEEEEEECSSHHH---------HHHTTCEEEEECTT----SSCCSSBSEEEEEGGGEE
T ss_pred             eEEEEEEEECCCccC---------CCCCCCEEEEeccC----CCCccceeeEeechHHeE
Confidence            4689999999986 4         59999999965200    0012  567777766543

>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}

Probab=85.67  E-value=0.7  Score=27.56  Aligned_cols=32  Identities=22%  Similarity=0.317  Sum_probs=11.3

Q ss_pred             cccCCCEEEcCCCCc------eEEEECC--EEEEEEecCc
Q psy12488         51 VVNVGDKVLLPKFGG------TKIEVEG--QELHLFKEAD   82 (91)
Q Consensus        51 ~VkvGD~Vlf~~y~g------~ev~~dg--~~y~ii~~~D   82 (91)
                      .+++||.|+++.++-      .+++++|  .+|+.++..+
T Consensus         2 ~l~~GD~VVh~~hGiG~~~gi~~~~v~g~~~ey~~l~y~~   41 (71)
T 3mlq_E            2 PHMPGDYLIHPEHGVGQYLGLETREVLGVKRDYLVLRYKG   41 (71)
T ss_dssp             --------------CEEEEEEEEEEETTEEEEEEEEEETT
T ss_pred             cCCCCCEEEECCCeeEEEeEEEEEEeCCeeEEEEEEEECC
Confidence            478999999999872      3566777  5888877543

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=84.92  E-value=0.74  Score=33.98  Aligned_cols=48  Identities=21%  Similarity=0.203  Sum_probs=29.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceE-EEECC--EEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTK-IEVEG--QELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~e-v~~dg--~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|...-+.... ...+|  .+|++++.+.+.
T Consensus        69 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~  119 (371)
T 3gqv_A           69 DYAGTVVAVGSDVT---------HIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWA  119 (371)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEE
T ss_pred             ccEEEEEEeCCCCC---------CCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheE
Confidence            47899999999874         59999999754211000 00012  567777665443

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=84.66  E-value=0.8  Score=33.51  Aligned_cols=25  Identities=28%  Similarity=0.399  Sum_probs=19.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEc
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL   60 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf   60 (91)
                      ...|+|+++|++...        .+++||+|.+
T Consensus        69 E~~G~V~~vG~~v~~--------~~~~GdrV~~   93 (360)
T 1piw_A           69 EIVGKVVKLGPKSNS--------GLKVGQRVGV   93 (360)
T ss_dssp             CEEEEEEEECTTCCS--------SCCTTCEEEE
T ss_pred             CceEEEEEeCCCCCC--------CCCCCCEEEE
Confidence            468999999997631        4899999954

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=83.71  E-value=0.8  Score=33.48  Aligned_cols=24  Identities=21%  Similarity=0.098  Sum_probs=20.1

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...| |+++|++ .         .+++||+|....
T Consensus        64 E~~G-V~~vG~~-~---------~~~vGdrV~~~~   87 (357)
T 2b5w_A           64 EAVG-VVVDPND-T---------ELEEGDIVVPTV   87 (357)
T ss_dssp             EEEE-EEEECTT-S---------SCCTTCEEEECS
T ss_pred             eeEE-EEEECCC-C---------CCCCCCEEEECC
Confidence            4689 9999998 3         599999998753

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=83.48  E-value=1.4  Score=36.38  Aligned_cols=42  Identities=24%  Similarity=0.237  Sum_probs=29.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|++||++..         .+++||+|+....++-      -+|.+++.+.+.
T Consensus       271 E~aG~V~~vG~~V~---------~~~vGDrV~~~~~G~~------ae~~~v~~~~~~  312 (795)
T 3slk_A          271 EGAGVVVETGPGVT---------GLAPGDRVMGMIPKAF------GPLAVADHRMVT  312 (795)
T ss_dssp             CEEEEEEEECSSCC---------SSCTTCEEEECCSSCS------SSEEEEETTSEE
T ss_pred             eeEEEEEEeCCCCC---------cCCCCCEEEEEecCCC------cCEEEeehHHEE
Confidence            47899999999875         5999999986432210      356666665543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=82.76  E-value=1.1  Score=32.33  Aligned_cols=26  Identities=27%  Similarity=0.286  Sum_probs=22.1

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|....
T Consensus        60 E~~G~V~~vG~~V~---------~~~~GdrV~~~~   85 (346)
T 4a2c_A           60 EFSGYIDAVGSGVD---------DLHPGDAVACVP   85 (346)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred             EEEEEEEEECCCcc---------cccCCCeEEeee
Confidence            46899999999886         689999998754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=82.45  E-value=1.6  Score=31.76  Aligned_cols=42  Identities=24%  Similarity=0.291  Sum_probs=28.5

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++.          .+++||+|......|.     =.+|+.++++.++
T Consensus        85 E~~G~V~~vG~~v----------~~~vGDrV~~~~~~G~-----~aey~~v~~~~~~  126 (342)
T 4eye_A           85 ETAGVVRSAPEGS----------GIKPGDRVMAFNFIGG-----YAERVAVAPSNIL  126 (342)
T ss_dssp             EEEEEEEECCTTS----------SCCTTCEEEEECSSCC-----SBSEEEECGGGEE
T ss_pred             eEEEEEEEECCCC----------CCCCCCEEEEecCCCc-----ceEEEEEcHHHeE
Confidence            4789999999864          3899999986542221     1456666666543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	91
d1p3ha_	99	b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium	7e-20
d1aono_	97	b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia c	3e-19
d1we3o_	96	b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus therm	1e-18

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 99

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.5 bits (183), Expect = 7e-20
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 14 FPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPV-VNVGDKVLLPKFGGTKIEVEG 72
             G++IP+ A+++     VVAVGPG    +GE   P+ V  GD V+  K+GGT+I+  G
Sbjct: 23 TASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNG 82

Query: 73 QELHLFKEADLLAVIEK 89
          +E  +    D+LAV+ K
Sbjct: 83 EEYLILSARDVLAVVSK 99

>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]} Length = 97

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Escherichia coli [TaxId: 562]

 Score = 72.9 bits (179), Expect = 3e-19
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 14 FPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF-GGTKIEVEG 72
            GG+++   A  +     V+AVG G    NGE     V VGD V+     G    +++ 
Sbjct: 21 SAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDN 80

Query: 73 QELHLFKEADLLAVIE 88
          +E+ +  E+D+LA++E
Sbjct: 81 EEVLIMSESDILAIVE 96

>d1we3o_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus thermophilus [TaxId: 274]} Length = 96

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Thermus thermophilus [TaxId: 274]

 Score = 71.5 bits (175), Expect = 1e-18
 Identities = 29/73 (39%), Positives = 48/73 (65%)

Query: 16 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQEL 75
          GG+++P+ A+++     V+AVG G    NG+ +   V  GD V+  K+GGT+IE++G+E 
Sbjct: 24 GGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEY 83

Query: 76 HLFKEADLLAVIE 88
           +  E DLLAV++
Sbjct: 84 VILSERDLLAVLQ 96

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	91
d1we3o_	96	Chaperonin-10 (GroES) {Thermus thermophilus [TaxId	99.96
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	99.96
d1aono_	97	Chaperonin-10 (GroES) {Escherichia coli [TaxId: 56	99.95
d1g31a_	107	GP31 co-chaperonin {Bacteriophage T4 [TaxId: 10665	95.41
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	93.45
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	93.22
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.15
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	93.09
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	92.99
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	92.72
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	92.63
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	91.36
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	91.34
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	91.07
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	90.94
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	90.47
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	90.23
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	90.02
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	88.63
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	88.22
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	88.21
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	86.65
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	83.73

>d1we3o_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=3.3e-30  Score=165.57  Aligned_cols=83  Identities=35%  Similarity=0.638  Sum_probs=79.7

Q ss_pred             cccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488          6 NKLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA   85 (91)
Q Consensus         6 ~k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla   85 (91)
                      ++.+.+++|+|||+||+++++++..|+|+|+|+|+.+.+|.++|+.+++||+|+|++|+|++|+++|++|++++++||||
T Consensus        14 k~~~~~~kT~gGIiLp~~~~~k~~~g~VvavG~g~~~~~g~~~p~~vkvGD~Vl~~~~~g~~v~~~g~~y~ii~e~dIla   93 (96)
T d1we3o_          14 KRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEYVILSERDLLA   93 (96)
T ss_dssp             EECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEECSSCEEEEECTTTEEE
T ss_pred             EEccccceecccEEecccccccceEEEEeeecceEecCCCCEEEeeEEeCCEEEEccCCCcEEEECCEEEEEEEHHHEEE
Confidence            35678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Eee
Q psy12488         86 VIE   88 (91)
Q Consensus        86 vi~   88 (91)
                      +++
T Consensus        94 vie   96 (96)
T d1we3o_          94 VLQ   96 (96)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            985

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=1.7e-29  Score=163.15  Aligned_cols=83  Identities=35%  Similarity=0.581  Sum_probs=77.8

Q ss_pred             ccccceecceeEEecCCccccceeEEEEEEcCCeeCCCC-eEecCcccCCCEEEcCCCCceEEEECCEEEEEEecCcEEE
Q psy12488          7 KLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNG-EYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLA   85 (91)
Q Consensus         7 k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G-~~~p~~VkvGD~Vlf~~y~g~ev~~dg~~y~ii~~~DIla   85 (91)
                      +.+.+++|+|||+||+++++++..|+|||||||+.+.+| ...|+.||+||+|+|++|+|++|++||++|++++++||||
T Consensus        16 ~~~~~~kT~gGIiLp~~~~~~~~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~~~~g~~v~~dg~~y~ii~e~dIla   95 (99)
T d1p3ha_          16 ANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLA   95 (99)
T ss_dssp             ECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEETTEEEEEEEGGGEEE
T ss_pred             EcchhcccccceEeccccccCceEEEEEEECCceEcCCCCEecCCeeecCCEEEEcccCceEEEECCEEEEEEEHHHEEE
Confidence            567789999999999999999999999999999998665 5789999999999999999999999999999999999999


Q ss_pred             Eeec
Q psy12488         86 VIEK   89 (91)
Q Consensus        86 vi~~   89 (91)
                      ++++
T Consensus        96 vi~~   99 (99)
T d1p3ha_          96 VVSK   99 (99)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9975

>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=3e-29  Score=161.01  Aligned_cols=82  Identities=28%  Similarity=0.430  Sum_probs=77.4

Q ss_pred             ccccceecceeEEecCCccccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCce-EEEECCEEEEEEecCcEEE
Q psy12488          7 KLSIYLLFPGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGT-KIEVEGQELHLFKEADLLA   85 (91)
Q Consensus         7 k~~~e~~T~~GI~LP~~~~~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g~-ev~~dg~~y~ii~~~DIla   85 (91)
                      +.+.+++|+|||+||++++++++.|+|+|||+|....+|+..|+.||+||+|+|++|+|. .+++||++|++++++||||
T Consensus        14 ~~~~e~kT~gGIiLp~~~~~~~~~g~VvavG~g~~~~~g~~~~~~vk~GD~Vl~~~~~g~~~~~~dg~~y~ii~e~dIla   93 (97)
T d1aono_          14 RKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILA   93 (97)
T ss_dssp             ECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSBCCTTSSCCCBCSCCTTCEEEECCCSSCEEEESSSCEEEEEETTTEEE
T ss_pred             EcccccEecceEEECCccccCceeEEEEEEeeeEEccCCcCccccCCCCCEEEEecccCceEEEECCEEEEEEEHHHEEE
Confidence            567889999999999999999999999999999999999999999999999999998775 5789999999999999999


Q ss_pred             Eee
Q psy12488         86 VIE   88 (91)
Q Consensus        86 vi~   88 (91)
                      +++
T Consensus        94 vie   96 (97)
T d1aono_          94 IVE   96 (97)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            996

>d1g31a_ b.35.1.1 (A:) GP31 co-chaperonin {Bacteriophage T4 [TaxId: 10665]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: GP31 co-chaperonin
species: Bacteriophage T4 [TaxId: 10665]

Probab=95.41  E-value=0.002  Score=40.61  Aligned_cols=45  Identities=31%  Similarity=0.456  Sum_probs=35.3

Q ss_pred             ceecceeEEecCCcc-ccceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         11 YLLFPGGVLIPEKAQ-QEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        11 e~~T~~GI~LP~~~~-~k~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      |.+|.+||+|-...+ +-|..|+|++||+....  +     -+|+||.|+++.
T Consensus        24 Ei~S~~Giiig~r~qgeiPl~~~viSVG~dVpe--~-----~~kvG~~vlLP~   69 (107)
T d1g31a_          24 EEVTESGLIIGKRVQGEVPELCVVHSVGPDVPE--G-----FCEVGDLTSLPV   69 (107)
T ss_dssp             CTTSCTTCCCCHHHHHHSEEEEEEEEECTTSCT--T-----SCCTTCEEEEEG
T ss_pred             eeecccceEEEeccCCCCceeEEEEEeCCCCCH--H-----HhccccEEEccC
Confidence            578899999954433 35899999999997642  1     678999999976

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=93.45  E-value=0.031  Score=35.06  Aligned_cols=42  Identities=21%  Similarity=0.438  Sum_probs=28.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC--CCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK--FGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~--y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|++..  +++-      .+|..+..+.++
T Consensus        63 e~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~~------ae~~~v~~~~~~  106 (147)
T d1qora1          63 EAAGIVSKVGSGVK---------HIKAGDRVVYAQSALGAY------SSVHNIIADKAA  106 (147)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEESCCSSCCS------BSEEEEEGGGEE
T ss_pred             ccccceeeeeeecc---------cccccceeeeeccccccc------eeEEEEehHHeE
Confidence            57899999999875         599999998643  3221      355556555543

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.22  E-value=0.064  Score=33.85  Aligned_cols=43  Identities=26%  Similarity=0.330  Sum_probs=29.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC-CCceEEEECCEEEEEEecCcEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-FGGTKIEVEGQELHLFKEADLL   84 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~-y~g~ev~~dg~~y~ii~~~DIl   84 (91)
                      ...|+|+++|++..         .+++||+|+... ..|.     =.+|++++++.++
T Consensus        67 e~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~-----~ae~~~v~~~~~~  110 (150)
T d1yb5a1          67 DVAGVIEAVGDNAS---------AFKKGDRVFTSSTISGG-----YAEYALAADHTVY  110 (150)
T ss_dssp             CEEEEEEEECTTCT---------TCCTTCEEEESCCSSCS-----SBSEEEEEGGGEE
T ss_pred             ceeeeeEeecceee---------ccccCcccccccccccc-----ccccccccccccc
Confidence            57899999999764         699999997543 2221     1456666665543

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.15  E-value=0.037  Score=36.65  Aligned_cols=25  Identities=32%  Similarity=0.663  Sum_probs=21.6

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|++.
T Consensus        63 E~~G~V~~vG~~v~---------~~~vGDrVv~~   87 (194)
T d1f8fa1          63 EGSGIIEAIGPNVT---------ELQVGDHVVLS   87 (194)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             ceEEEeeecCccce---------eEccCceeeee
Confidence            57999999999875         59999999874

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=93.09  E-value=0.041  Score=36.03  Aligned_cols=25  Identities=32%  Similarity=0.523  Sum_probs=21.2

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+|+||+|...
T Consensus        60 E~~G~V~~vG~~v~---------~~~vGdrV~v~   84 (177)
T d1jqba1          60 EAVGEVVEVGSEVK---------DFKPGDRVIVP   84 (177)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             eeeEEeeecccccc---------eecCCCcEEEe
Confidence            46899999999864         69999999854

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=92.99  E-value=0.035  Score=35.73  Aligned_cols=26  Identities=27%  Similarity=0.437  Sum_probs=22.1

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|.+..
T Consensus        64 E~~G~Vv~vG~~v~---------~~~~GdrV~~~~   89 (178)
T d1e3ja1          64 EASGTVVKVGKNVK---------HLKKGDRVAVEP   89 (178)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred             ccceEEEecCcccC---------CCCCCCEEEECc
Confidence            57899999999875         599999998754

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.72  E-value=0.023  Score=36.56  Aligned_cols=53  Identities=17%  Similarity=0.263  Sum_probs=35.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCCCc-----------------eE---EEECC--EEEEEEecCcEEE
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGG-----------------TK---IEVEG--QELHLFKEADLLA   85 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y~g-----------------~e---v~~dg--~~y~ii~~~DIla   85 (91)
                      ...|+|+++|++..         .+++||+|....+.+                 ..   +..+|  .+|+++++.+.+.
T Consensus        69 E~~G~V~~~g~~v~---------~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~  139 (177)
T d1jvba1          69 EIAGKIEEVGDEVV---------GYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMY  139 (177)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEE
T ss_pred             eEEEEEeeeccCcc---------ccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEE
Confidence            57899999999765         589999997654211                 00   11233  5888888887776


Q ss_pred             Eeec
Q psy12488         86 VIEK   89 (91)
Q Consensus        86 vi~~   89 (91)
                      ++.+
T Consensus       140 ~~~~  143 (177)
T d1jvba1         140 KLRR  143 (177)
T ss_dssp             ECSS
T ss_pred             ECCC
Confidence            6553

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.63  E-value=0.04  Score=36.75  Aligned_cols=25  Identities=24%  Similarity=0.385  Sum_probs=21.4

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        67 E~~G~Vv~vG~~V~---------~~~vGdrV~v~   91 (201)
T d1kola1          67 EITGEVIEKGRDVE---------NLQIGDLVSVP   91 (201)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEECC
T ss_pred             eeeeeeeccccccc---------cccccceeEEe
Confidence            46899999999875         59999999865

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.36  E-value=0.081  Score=33.76  Aligned_cols=25  Identities=40%  Similarity=0.563  Sum_probs=21.5

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|.+.
T Consensus        67 E~~G~V~~~G~~v~---------~~~~GdrV~~~   91 (175)
T d1llua1          67 EGVGYVAAVGSGVT---------RVKEGDRVGIP   91 (175)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             cceEEEEEeCCCcc---------ccccCCEEEec
Confidence            57899999999875         58999999865

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.34  E-value=0.085  Score=34.22  Aligned_cols=26  Identities=23%  Similarity=0.394  Sum_probs=21.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|.+..
T Consensus        70 E~~G~V~~vG~~v~---------~~~~GdrV~~~~   95 (185)
T d1pl8a1          70 EASGTVEKVGSSVK---------HLKPGDRVAIEP   95 (185)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             eeeeeEEEecccee---------eecccccceecc
Confidence            47899999999864         599999998753

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=91.07  E-value=0.083  Score=34.46  Aligned_cols=26  Identities=31%  Similarity=0.134  Sum_probs=21.6

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|.+..
T Consensus        61 E~~G~V~~vG~~V~---------~~~vGdrV~v~~   86 (179)
T d1uufa1          61 EIVGRVVAVGDQVE---------KYAPGDLVGVGC   86 (179)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             cccccchhhccccc---------cCCCCCEEEEcc
Confidence            47899999999875         589999997544

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=90.94  E-value=0.11  Score=34.02  Aligned_cols=26  Identities=31%  Similarity=0.438  Sum_probs=22.2

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|....
T Consensus        68 E~~G~Vv~vG~~v~---------~~~vGdrV~v~~   93 (198)
T d2jhfa1          68 EAAGIVESIGEGVT---------TVRPGDKVIPLF   93 (198)
T ss_dssp             SEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             ceeEEEEecCcccc---------CcCCCCEEEEee
Confidence            57899999999865         589999998865

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=90.47  E-value=0.13  Score=33.72  Aligned_cols=32  Identities=28%  Similarity=0.350  Sum_probs=25.3

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF   63 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y   63 (91)
                      ...|+|+++|++..+.++.    .+++||+|.+..+
T Consensus        65 E~~G~V~~vG~~v~~~~~~----~~~~Gd~V~~~~~   96 (184)
T d1vj0a1          65 EGAGRVVEVNGEKRDLNGE----LLKPGDLIVWNRG   96 (184)
T ss_dssp             EEEEEEEEESSCCBCTTSC----BCCTTCEEEECSE
T ss_pred             eeeeeeeEEeccccccccc----cccceeeeEeccc
Confidence            4789999999988755443    6899999998653

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=90.23  E-value=0.15  Score=33.59  Aligned_cols=26  Identities=35%  Similarity=0.434  Sum_probs=21.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|....
T Consensus        68 E~~G~Vv~~G~~v~---------~~~~GdrV~~~~   93 (198)
T d1p0fa1          68 EAVGVVESIGAGVT---------CVKPGDKVIPLF   93 (198)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             eeeeeeeecCcccc---------cCcCCCEEEEEe
Confidence            47899999999775         589999999754

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=90.02  E-value=0.14  Score=32.75  Aligned_cols=26  Identities=27%  Similarity=0.356  Sum_probs=21.7

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|....
T Consensus        64 E~~G~V~~vG~~v~---------~~~~GdrV~~~~   89 (171)
T d1h2ba1          64 ENVGYIEEVAEGVE---------GLEKGDPVILHP   89 (171)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             eeeeeeecccCCCC---------cCCCCCEEEEcC
Confidence            46899999999875         589999998754

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.63  E-value=0.2  Score=31.56  Aligned_cols=25  Identities=40%  Similarity=0.705  Sum_probs=21.1

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++..         .+++||+|...
T Consensus        62 E~~G~Vv~vG~~v~---------~~~vGdrV~~~   86 (171)
T d1rjwa1          62 EGVGIVEEVGPGVT---------HLKVGDRVGIP   86 (171)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred             EEEEEEEEeccccc---------CceeeeEEeec
Confidence            47899999999765         68999999864

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=88.22  E-value=0.25  Score=32.10  Aligned_cols=26  Identities=35%  Similarity=0.443  Sum_probs=22.0

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         .+++||+|+...
T Consensus        68 E~~G~V~~vG~~V~---------~~~~GdrV~~~~   93 (202)
T d1e3ia1          68 ECAGIVESVGPGVT---------NFKPGDKVIPFF   93 (202)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             ccceEEeeecCCce---------eccCCCEEEEEe
Confidence            47899999999875         589999998754

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=88.21  E-value=0.25  Score=32.22  Aligned_cols=27  Identities=30%  Similarity=0.463  Sum_probs=22.5

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF   63 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~y   63 (91)
                      ...|+|+++|++..         .+++||+|....+
T Consensus        69 E~~G~v~~vG~~v~---------~~~~GdrV~~~~~   95 (199)
T d1cdoa1          69 EGAGIVESVGPGVT---------EFQPGEKVIPLFI   95 (199)
T ss_dssp             CEEEEEEEECTTCC---------SCCTTCEEEECSS
T ss_pred             ccceEEEEEcCCCc---------eecCCCEEEEeee
Confidence            47899999999865         5999999987643

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.65  E-value=0.27  Score=32.20  Aligned_cols=26  Identities=27%  Similarity=0.363  Sum_probs=20.6

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP   61 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~   61 (91)
                      ...|+|+++|++...        ..|+||+|.+.
T Consensus        69 E~~G~Vv~vG~~v~~--------~~k~GdrV~~~   94 (192)
T d1piwa1          69 EIVGKVVKLGPKSNS--------GLKVGQRVGVG   94 (192)
T ss_dssp             CEEEEEEEECTTCCS--------SCCTTCEEEEC
T ss_pred             ccccchhhccccccc--------ccCCCCeeeEe
Confidence            378999999997542        57999999643

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=83.73  E-value=0.58  Score=30.47  Aligned_cols=26  Identities=27%  Similarity=0.463  Sum_probs=21.9

Q ss_pred             ceeEEEEEEcCCeeCCCCeEecCcccCCCEEEcCC
Q psy12488         28 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK   62 (91)
Q Consensus        28 ~~~G~VVAVG~G~~~~~G~~~p~~VkvGD~Vlf~~   62 (91)
                      ...|+|+++|++..         ..++||+|....
T Consensus        67 E~~G~V~~vG~~V~---------~~~~GdrV~v~~   92 (197)
T d2fzwa1          67 LGAGIVESVGEGVT---------KLKAGDTVIPLY   92 (197)
T ss_dssp             EEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred             ceeeEEEeecCCce---------ecCCCCEEEEcc
Confidence            47899999999875         689999998653