Psyllid ID: psy12533

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------
Protein Sequence
MAEILNQIPEITDQAVSSDSDEDMIRNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFTTMAEILNQIPEITDQAVSSDSDEDMIRNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFSQFVYWREPICETLPEDTI
Secondary Structure (PSIPRED)
cccccccccccccccccccccHHHHHHcccccccccccccccHHHHHcccccccccEEEEEEEEccccEEEEEEEEEEEEcccEEEEEEccccEEEcccccccccccccccccccHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHccccccccccccEEcccccHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHcccccccEEEEcccccccccccccccccHHcHHHHHcccccccccccccccccccHHHcccccccccccccccccHHHHHccccccccccccccccHHHHHcccccccccEEEEEEEEccccEEEEEEEEEEEEcccEEEEEEccccEEEcccccccccccccccccccHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHccccccccccccEEcccccHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccEEccccccccHHHHHHcccccccEEEEcccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHccccccccccccccccccHccccccccccEEEEEcccHHHHHHccccccccEEEEEEEEEEccEEEEEEEEEEEEcccEEEEEEccccEcHcHHHHHHHHHccccHHHHHHHHHHHHHHHcccEEEEEEHHHHHHHHHHHHHHHHHcccccccccccEEEcccHHHHHHHHHHHHccccEEEHHHHHHHHHHcccccccEEEEccccccHHHHHHHccccccEEEEEccccHEHHEccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccHHHHHHccccccccEEEEEEEEEEccEEEEEEEEEEEEcccEEEEEEccccEcHcHHHHHHHHHccccHHHHHHHHHHHHHHHcccEEEEEEHHHHHHHHHHHHHHHHHcccccccccccEEEcccHHHHHHHHHHHHccccEEEHHHHHHHHHHcccccccEEEEccccccHHHHHHHccccccEEEEEccccHEHHEcccccccHHHHHHHHHHHccccccccccccccccccEccccccccccHccc
Coil and Loop (DISEMBL)
MAEILNqipeitdqavssdsdedmirnkrglnanhkkTLRLTSEQIAGLELrsgmneveFSVTTAYQGTTRCKCYLfkwrwndkivisdidgtitksdvlghvlpimgkdwaqnGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVkqedltlpegpmllnptslLNAFHTEVIEKKPQEFKISCLRDimalfppntqpfyagygnkvnDVWSYqavgiplsriftinsrgevKHEMTQTFQSTYSNMSYLVDqmfpsslegtssedFTTMAEILNQipeitdqavssdsdedmirnkrglnanhkkTLRLTSEQIAGLELrsgmneveFSVTTAYQGTTRCKCYLfkwrwndkivisdidgtitksdvlghvlpimgkdwaqnGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVkqedltlpegpmllnptslLNAFHTEVIEKKPQEFKISCLRDimalfppntqpfyagygnkvnDVWSYqavgiplsriftinsrgevKHEMTQTFQSTYSNMSYLVDqmfpsslegtssedfsqfvywrepicetlpedti
Flexible Loop (DISEMBL)
maeilnqipeitdqavssdsdeDMIRNKrglnanhkktlrLTSEQIAGLELRSGMNEVEFSvttayqgttrCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFTTMAEILNQIPEITDQAVSSDSDEDMIRNKrglnanhkktlrLTSEQIAGLELRSGMNEVEFSvttayqgttrCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFSQFVYWREPICETLPEDTI
Low Complexity Region (SEG)
MAEILNQIPEITDQAVSSDSDEDMIRNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFTTMAEILNQIPEITDQAVSSDSDEDMIRNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFSQFVYWREPICETLPEDTI
Disordered region (IsUnstruct)
*********************************************IAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQ*************************************************************IAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMF**********DFSQFVYWREPICE*******
Disordered Region (DISOPRED)
*******************************************EQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFTTMAEILN**************************************QIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFSQFVYWREPICET*P****
Disordered Region (DISEMBL)
MAEILNQIPEITD*********DMIRNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFTTMAEILNQIPEITD*********DMIRNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFSQFVYWREPICETLPEDTI
Disordered Region (DISPRO)
********************************ANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFTTMAEILNQI************************ANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFSQFVYWREPICETL*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEILNQIPEITDQAVSSDSDEDMIRNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFTTMAEILNQIPEITDQAVSSDSDEDMIRNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFSQFVYWREPICETLPEDTI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	567	2.2.26 [Sep-21-2011]
Q9BQK8	851	Phosphatidate phosphatase	yes	N/A	0.439	0.292	0.549	1e-82
Q92539	896	Phosphatidate phosphatase	no	N/A	0.453	0.286	0.544	2e-81
Q99PI5	893	Phosphatidate phosphatase	yes	N/A	0.442	0.281	0.552	2e-81
Q99PI4	848	Phosphatidate phosphatase	no	N/A	0.447	0.299	0.534	1e-80
Q7TNN8	847	Phosphatidate phosphatase	N/A	N/A	0.447	0.299	0.534	1e-80
Q14693	890	Phosphatidate phosphatase	no	N/A	0.444	0.283	0.533	4e-76
Q91ZP3	924	Phosphatidate phosphatase	no	N/A	0.439	0.269	0.535	1e-75
Q9UUJ6	656	Nuclear elongation and de	yes	N/A	0.552	0.477	0.396	1e-65
P32567	862	Phosphatidic acid phospho	yes	N/A	0.393	0.258	0.478	5e-60

>sp|Q9BQK8|LPIN3_HUMAN Phosphatidate phosphatase LPIN3 OS=Homo sapiens GN=LPIN3 PE=1 SV=3

 Score =  307 bits (787), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 139/253 (54%), Positives = 189/253 (74%), Gaps = 4/253 (1%)

Query: 310 HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
           +KK+LRL+S+QI  L L+ G N+V FSVTT YQGT RCK  ++ W+W+DK+VISDIDGTI
Sbjct: 590 YKKSLRLSSDQIRRLNLQEGANDVVFSVTTQYQGTCRCKATIYLWKWDDKVVISDIDGTI 649

Query: 370 TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
           TKSD LGH+LP +GKDW   G+T L+ KI+ NGYK LY SARAIG + +T+ YLQ V + 
Sbjct: 650 TKSDALGHILPQLGKDWTHQGITSLYHKIQLNGYKFLYCSARAIGMADLTKGYLQWVSEG 709

Query: 430 DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
             +LP+GP+LL+P+SL +A H EVIEKKP+ FK++CL DI  LF P+ QPFYA +GN+ N
Sbjct: 710 GCSLPKGPILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPHGQPFYAAFGNRPN 769

Query: 490 DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSE--- 546
           DV++Y+ VG+P SRIFT+N RGE+  E+ +  +STY  +  +V+ +FP    G S++   
Sbjct: 770 DVFAYRQVGLPESRIFTVNPRGELIQELIKNHKSTYERLGEVVELLFPPVARGPSTDLAN 829

Query: 547 -DFSQFVYWREPI 558
            ++S F YWREP+
Sbjct: 830 PEYSNFCYWREPL 842

Regulates fatty acid metabolism. Magnesium-dependent phosphatidate phosphatase enzyme which catalyzes the conversion of phosphatidic acid to diacylglycerol during triglyceride, phosphatidylcholine and phosphatidylethanolamine biosynthesis.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4

>sp|Q92539|LPIN2_HUMAN Phosphatidate phosphatase LPIN2 OS=Homo sapiens GN=LPIN2 PE=1 SV=1

 Score =  303 bits (777), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/261 (54%), Positives = 186/261 (71%), Gaps = 4/261 (1%)

Query: 304 RGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVIS 363
            G   ++KK+LRL+S+QIA L+L  G N+V FS+TT YQGT RC   ++ W WNDKI+IS
Sbjct: 629 HGSTTSYKKSLRLSSDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKIIIS 688

Query: 364 DIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL 423
           DIDGTITKSD LG +LP +GKDW   G+ +L+  I ENGYK LY SARAIG + +TR YL
Sbjct: 689 DIDGTITKSDALGQILPQLGKDWTHQGIAKLYHSINENGYKFLYCSARAIGMADMTRGYL 748

Query: 424 QSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAG 483
             V  +   LP GP++L+P+SL +AFH EVIEKKP++FKI CL DI  LF P+ QPFYA 
Sbjct: 749 HWVNDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAA 808

Query: 484 YGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFP-SSLEG 542
           +GN+ NDV++Y  VG+P  RIFT+N +GE+  E T+  +S+Y  +S LV+ +FP  S E 
Sbjct: 809 FGNRPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQ 868

Query: 543 TSS---EDFSQFVYWREPICE 560
            S+    +FS F YWR+PI E
Sbjct: 869 NSAFPCPEFSSFCYWRDPIPE 889

Plays important roles in controlling the metabolism of fatty acids at differents levels. Acts as a magnesium-dependent phosphatidate phosphatase enzyme which catalyzes the conversion of phosphatidic acid to diacylglycerol during triglyceride, phosphatidylcholine and phosphatidylethanolamine biosynthesis in the reticulum endoplasmic membrane. Acts also as a nuclear transcriptional coactivator for PPARGC1A to modulate lipid metabolism.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

>sp|Q99PI5|LPIN2_MOUSE Phosphatidate phosphatase LPIN2 OS=Mus musculus GN=Lpin2 PE=1 SV=2

 Score =  303 bits (777), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 141/255 (55%), Positives = 185/255 (72%), Gaps = 4/255 (1%)

Query: 308 ANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDG 367
           A++KK+LRL+S+QIA L+L  G N+V FS+TT YQGT RC   ++ W WNDK++ISDIDG
Sbjct: 630 ASYKKSLRLSSDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKVIISDIDG 689

Query: 368 TITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVK 427
           TITKSD LG +LP +GKDW   G+ RL+  I ENGYK LY SARAIG + +TR YL  V 
Sbjct: 690 TITKSDALGQILPQLGKDWTHQGIARLYHSINENGYKFLYCSARAIGMADMTRGYLHWVN 749

Query: 428 QEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNK 487
            +   LP GP++L+P+SL +AFH EVIEKKP++FKI CL DI  LF P+ QPFYA +GN+
Sbjct: 750 DKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSRQPFYAAFGNR 809

Query: 488 VNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFP-SSLEGTSS- 545
            NDV++Y  VG+P  RIFT+N +GE+  E T+  +S+Y  +S LV+ +FP  S E  S+ 
Sbjct: 810 PNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQNSAF 869

Query: 546 --EDFSQFVYWREPI 558
              +FS F YWR+PI
Sbjct: 870 PCPEFSSFCYWRDPI 884

Plays important roles in controlling the metabolism of fatty acids at differents levels. Acts as a magnesium-dependent phosphatidate phosphatase enzyme which catalyzes the conversion of phosphatidic acid to diacylglycerol during triglyceride, phosphatidylcholine and phosphatidylethanolamine biosynthesis in the reticulum endoplasmic membrane. Acts also as a nuclear transcriptional coactivator for PPARGC1A to modulate lipid metabolism.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

>sp|Q99PI4|LPIN3_MOUSE Phosphatidate phosphatase LPIN3 OS=Mus musculus GN=Lpin3 PE=1 SV=1

 Score =  301 bits (770), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 138/258 (53%), Positives = 185/258 (71%), Gaps = 4/258 (1%)

Query: 305 GLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISD 364
           G    +KK+LRL+S+QI  L L  G N+V FSVTT YQGT RCK  ++ W W+DK+VISD
Sbjct: 582 GYVPTYKKSLRLSSDQIRCLNLNEGANDVVFSVTTQYQGTCRCKATIYLWNWDDKVVISD 641

Query: 365 IDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ 424
           IDGTITKSD LGH+LP +GKDW   G+T L+ KI  NGYK LY SARAIG + +T+ YLQ
Sbjct: 642 IDGTITKSDALGHILPQLGKDWTHQGITSLYHKIHLNGYKFLYCSARAIGMADLTKGYLQ 701

Query: 425 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGY 484
            V +    LP+GP+LL+P+SL +A H EVIEKKP+ FK++CL DI  LF P  QPF+A +
Sbjct: 702 WVSEHGCGLPKGPILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPQRQPFHAAF 761

Query: 485 GNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTS 544
           GN+ NDV++Y+ VG+P SRIFT+N RGE+  E+ ++ +STY  +  +V+ +FP  + G S
Sbjct: 762 GNRPNDVFAYRQVGLPESRIFTVNPRGELIQELIKSHKSTYQRLGEVVELLFPPVVRGPS 821

Query: 545 ----SEDFSQFVYWREPI 558
               S ++S   YWR+P+
Sbjct: 822 TDLASPEYSNLSYWRKPL 839

Regulates fatty acid metabolism. Magnesium-dependent phosphatidate phosphatase enzyme which catalyzes the conversion of phosphatidic acid to diacylglycerol during triglyceride, phosphatidylcholine and phosphatidylethanolamine biosynthesis.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

>sp|Q7TNN8|LPIN3_MUSSP Phosphatidate phosphatase LPIN3 OS=Mus spretus GN=Lpin3 PE=2 SV=1

 Score =  301 bits (770), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 138/258 (53%), Positives = 185/258 (71%), Gaps = 4/258 (1%)

Query: 305 GLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISD 364
           G    +KK+LRL+S+QI  L L  G N+V FSVTT YQGT RCK  ++ W W+DK+VISD
Sbjct: 581 GYVPTYKKSLRLSSDQIRCLNLNEGANDVVFSVTTQYQGTCRCKATIYLWNWDDKVVISD 640

Query: 365 IDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ 424
           IDGTITKSD LGH+LP +GKDW   G+T L+ KI  NGYK LY SARAIG + +T+ YLQ
Sbjct: 641 IDGTITKSDALGHILPQLGKDWTHQGITSLYHKIHLNGYKFLYCSARAIGMADLTKGYLQ 700

Query: 425 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGY 484
            V +    LP+GP+LL+P+SL +A H EVIEKKP+ FK++CL DI  LF P  QPF+A +
Sbjct: 701 WVSEHGCGLPKGPILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPQRQPFHAAF 760

Query: 485 GNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTS 544
           GN+ NDV++Y+ VG+P SRIFT+N RGE+  E+ ++ +STY  +  +V+ +FP  + G S
Sbjct: 761 GNRPNDVFAYRQVGLPESRIFTVNPRGELIQELIKSHKSTYQRLGEVVELLFPPVVRGPS 820

Query: 545 ----SEDFSQFVYWREPI 558
               S ++S   YWR+P+
Sbjct: 821 TDLASPEYSNLSYWRKPL 838

Regulates fatty acid metabolism. Magnesium-dependent phosphatidate phosphatase enzyme which catalyzes the conversion of phosphatidic acid to diacylglycerol during triglyceride, phosphatidylcholine and phosphatidylethanolamine biosynthesis.

Mus spretus (taxid: 10096)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

>sp|Q14693|LPIN1_HUMAN Phosphatidate phosphatase LPIN1 OS=Homo sapiens GN=LPIN1 PE=1 SV=2

 Score =  286 bits (731), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 137/257 (53%), Positives = 188/257 (73%), Gaps = 5/257 (1%)

Query: 307 NANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDID 366
           N ++KKTLRLTSEQ+  L+L++G N+V FSVTT YQGT RC+  ++ W W+DK++ISDID
Sbjct: 621 NVSYKKTLRLTSEQLKSLKLKNGPNDVVFSVTTQYQGTCRCEGTIYLWNWDDKVIISDID 680

Query: 367 GTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSV 426
           GTIT+SD LGH+LP +GKDW   G+ +L+ K+ +NGYK LY SARAIG + +TR YL  V
Sbjct: 681 GTITRSDTLGHILPTLGKDWTHQGIAKLYHKVSQNGYKFLYCSARAIGMADMTRGYLHWV 740

Query: 427 KQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGN 486
            +    LP+GP+LL+P+SL +A H EVIEKKP++FK+ CL DI  LF PNT+PFYA +GN
Sbjct: 741 NERGTVLPQGPLLLSPSSLFSALHREVIEKKPEKFKVQCLTDIKNLFFPNTEPFYAAFGN 800

Query: 487 KVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFP-----SSLE 541
           +  DV+SY+ VG+ L+RIFT+N +GE+  E  +T  S+Y  +  +VD +FP      S +
Sbjct: 801 RPADVYSYKQVGVSLNRIFTVNPKGELVQEHAKTNISSYVRLCEVVDHVFPLLKRSHSSD 860

Query: 542 GTSSEDFSQFVYWREPI 558
              S+ FS F +WREP+
Sbjct: 861 FPCSDTFSNFTFWREPL 877

Plays important roles in controlling the metabolism of fatty acids at differents levels. Acts as a magnesium-dependent phosphatidate phosphatase enzyme which catalyzes the conversion of phosphatidic acid to diacylglycerol during triglyceride, phosphatidylcholine and phosphatidylethanolamine biosynthesis in the reticulum endoplasmic membrane. Acts also as a nuclear transcriptional coactivator for PPARGC1A/PPARA to modulate lipid metabolism gene expression (By similarity). Is involved in adipocyte differentiation. May also be involved in mitochondrial fission by converting phosphatidic acid to diacylglycerol.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

>sp|Q91ZP3|LPIN1_MOUSE Phosphatidate phosphatase LPIN1 OS=Mus musculus GN=Lpin1 PE=1 SV=1

 Score =  284 bits (727), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 136/254 (53%), Positives = 186/254 (73%), Gaps = 5/254 (1%)

Query: 310 HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
           +KKTLRLTSEQ+  L+L++G N+V FSVTT YQGT RC+  ++ W W+DK++ISDIDGTI
Sbjct: 658 YKKTLRLTSEQLKSLKLKNGPNDVVFSVTTQYQGTCRCEGTIYLWNWDDKVIISDIDGTI 717

Query: 370 TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
           T+SD LGH+LP +GKDW   G+ +L+ K+ +NGYK LY SARAIG + +TR YL  V + 
Sbjct: 718 TRSDTLGHILPTLGKDWTHQGIAKLYHKVSQNGYKFLYCSARAIGMADMTRGYLHWVNER 777

Query: 430 DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
              LP+GP+LL+P+SL +A H EVIEKKP++FK+ CL DI  LF PNT+PFYA +GN+  
Sbjct: 778 GTVLPQGPLLLSPSSLFSALHREVIEKKPEKFKVQCLTDIKNLFFPNTEPFYAAFGNRPA 837

Query: 490 DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFP-----SSLEGTS 544
           DV+SY+ VG+ L+RIFT+N +GE+  E  +T  S+Y  +  +VD +FP      S +   
Sbjct: 838 DVYSYKQVGVSLNRIFTVNPKGELVQEHAKTNISSYVRLCEVVDHVFPLLKRSHSCDFPC 897

Query: 545 SEDFSQFVYWREPI 558
           S+ FS F +WREP+
Sbjct: 898 SDTFSNFTFWREPL 911

Plays important roles in controlling the metabolism of fatty acids at differents levels. Acts as a magnesium-dependent phosphatidate phosphatase enzyme which catalyzes the conversion of phosphatidic acid to diacylglycerol during triglyceride, phosphatidylcholine and phosphatidylethanolamine biosynthesis. Acts also as nuclear transcriptional coactivator for PPARGC1A/PPARA regulatory pathway to modulate lipid metabolism gene expression. Is involved in adipocyte differentiation. Isoform 1 is recruited at the mitochondrion outer membrane and is involved in mitochondrial fission by converting phosphatidic acid to diacylglycerol.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

>sp|Q9UUJ6|NED1_SCHPO Nuclear elongation and deformation protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ned1 PE=1 SV=1

 Score =  251 bits (640), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 136/343 (39%), Positives = 199/343 (58%), Gaps = 30/343 (8%)

Query: 244 QTFQSTYSNMSYLVDQMFPSSLEGTSSEDFTTMAEILNQIPEITDQ--AVSSDSDEDMIR 301
           +TF+  +  +  L+ +    +L   +SED    AE+    P  +      S  SD  ++ 
Sbjct: 247 ETFKDEFPMIEKLLREDEEGNLWFHASEDAKKFAEVYGHSPPASPSRTPASPKSDSALMD 306

Query: 302 NKRGLNANHK-----------------KTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGT 344
               L+  H                  KTLRLTS+Q+  L L+ G NE+ F V     G 
Sbjct: 307 EDSDLSRRHSLSEQSLSPVSESYPQYAKTLRLTSDQLRSLNLKPGKNELSFGVNG---GK 363

Query: 345 TRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYK 404
             C   LF W+ ND +VISDIDGTITKSD LGH+  ++GKDW   GV +L+T I  NGYK
Sbjct: 364 AICTANLFFWKHNDPVVISDIDGTITKSDALGHMFTLIGKDWTHAGVAKLYTDITNNGYK 423

Query: 405 LLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKIS 464
           ++YL++R++GQ+  TR YL++++Q   +LP+GP++L+P   + A H EVI +KP+ FK++
Sbjct: 424 IMYLTSRSVGQADSTRHYLRNIEQNGYSLPDGPVILSPDRTMAALHREVILRKPEVFKMA 483

Query: 465 CLRDIMALF--PPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQT-- 520
           CLRD+  +F  P    PFYAG+GN++ D  SY  V +P +RIFTINS GEV  E+ Q   
Sbjct: 484 CLRDLCNIFALPVPRTPFYAGFGNRITDAISYNHVRVPPTRIFTINSAGEVHIELLQRSG 543

Query: 521 FQSTYSNMSYLVDQMFPSSLEGTSSEDFSQFV---YWREPICE 560
            +S+Y  M+ LVD  FP  +E ++ ++ S F    +WR P+ E
Sbjct: 544 HRSSYVYMNELVDHFFP-PIEVSTRDEVSSFTDVNFWRSPLLE 585

May have a role in the maintenance of the nuclear envelope structure and in minichromosome stability.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P32567|PAH1_YEAST Phosphatidic acid phosphohydrolase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAH1 PE=1 SV=1

 Score =  232 bits (592), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 114/238 (47%), Positives = 158/238 (66%), Gaps = 15/238 (6%)

Query: 37  KTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITK 96
           +T+RLT++Q+  L L  G N+++FSV     G       LF WRW+  IVISDIDGTITK
Sbjct: 349 RTIRLTNDQLKCLNLTYGENDLKFSVD---HGKAIVTSKLFVWRWDVPIVISDIDGTITK 405

Query: 97  SDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL 156
           SD LGHVL ++GKDW   GV +LF++I  NGY +LYL+AR+ GQ+  TR YL+S++Q   
Sbjct: 406 SDALGHVLAMIGKDWTHLGVAKLFSEISRNGYNILYLTARSAGQADSTRSYLRSIEQNGS 465

Query: 157 TLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALF----------PPNTQPFY 206
            LP GP++L+P   + A   EVI KKP+ FKI+CL DI +L+             + PF+
Sbjct: 466 KLPNGPVILSPDRTMAALRREVILKKPEVFKIACLNDIRSLYFEDSDNEVDTEEKSTPFF 525

Query: 207 AGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQ--TFQSTYSNMSYLVDQMFP 262
           AG+GN++ D  SY+ VGIP SRIFTIN+ GEV  E+ +   ++S+Y +++ LVD  FP
Sbjct: 526 AGFGNRITDALSYRTVGIPSSRIFTINTEGEVHMELLELAGYRSSYIHINELVDHFFP 583

Mg(2+)-dependent phosphatidate (PA) phosphatase which catalyzes the dephosphorylation of PA to yield diacylglycerol. Required for de novo lipid synthesis and formation of lipid droplets. Controles transcription of phospholipid biosynthetic genes and nuclear structure by regulating the amount of membrane present at the nuclear envelope. Involved in plasmid maintenance, in respiration and in cell proliferation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	567
345479646	1222	PREDICTED: hypothetical protein LOC10011	0.446	0.207	0.748	1e-117
383862900	1110	PREDICTED: phosphatidate phosphatase LPI	0.446	0.227	0.740	1e-115
307204225	1116	Lipin-2 [Harpegnathos saltator]	0.440	0.224	0.745	1e-114
350423404	1109	PREDICTED: phosphatidate phosphatase LPI	0.440	0.225	0.741	1e-114
340720234	1109	PREDICTED: phosphatidate phosphatase LPI	0.440	0.225	0.741	1e-113
332021524	1060	Lipin-2 [Acromyrmex echinatior]	0.440	0.235	0.741	1e-113
328786485	1093	PREDICTED: phosphatidate phosphatase LPI	0.440	0.228	0.737	1e-113
380017732	1092	PREDICTED: phosphatidate phosphatase LPI	0.440	0.228	0.737	1e-113
189239526	898	PREDICTED: similar to CG8709 CG8709-PB [	0.453	0.286	0.712	1e-113
307186413	1081	Lipin-2 [Camponotus floridanus]	0.440	0.231	0.737	1e-112

>gi|345479646|ref|XP_001600171.2| PREDICTED: hypothetical protein LOC100115448 [Nasonia vitripennis]

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 190/254 (74%), Positives = 231/254 (90%), Gaps = 1/254 (0%)

Query: 309  NHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGT 368
            N++KTLRL+SEQIA L L+ G+NEV FSVTTAYQGTTRCKC++++WRW+DKIVISDIDGT
Sbjct: 961  NYRKTLRLSSEQIASLNLKEGVNEVVFSVTTAYQGTTRCKCFIYQWRWDDKIVISDIDGT 1020

Query: 369  ITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQ 428
            ITKSDVLGH+LPI+GKDWAQ+GV +LFTKIK NGYKLLYLSARAIGQ+RVTREYL+S++Q
Sbjct: 1021 ITKSDVLGHILPIVGKDWAQSGVAQLFTKIKNNGYKLLYLSARAIGQARVTREYLKSIRQ 1080

Query: 429  EDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKV 488
             DL+LP+GP+LLNPTSL++AFH EVIEKKP+EFKISCL DI ALFP  +QPFYAGYGN++
Sbjct: 1081 GDLSLPDGPLLLNPTSLISAFHREVIEKKPEEFKISCLSDIKALFPEGSQPFYAGYGNRI 1140

Query: 489  NDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDF 548
            NDVW+Y+AVGIP +RIFTIN RGE+KHE+TQTFQS+YSNMSY+VD +FP +L   ++++F
Sbjct: 1141 NDVWAYRAVGIPTTRIFTINHRGELKHELTQTFQSSYSNMSYIVDHLFP-ALREDAADEF 1199

Query: 549  SQFVYWREPICETL 562
            S F YWREPI + L
Sbjct: 1200 SNFSYWREPIQDLL 1213

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862900|ref|XP_003706921.1| PREDICTED: phosphatidate phosphatase LPIN1-like [Megachile rotundata]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 188/254 (74%), Positives = 225/254 (88%), Gaps = 1/254 (0%)

Query: 310  HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
            ++KTLRL+S QIA L L+ G NEV FSVTTAYQGTTRCKC+++KWRW+DKIVISDIDGTI
Sbjct: 847  YRKTLRLSSTQIASLNLKDGANEVVFSVTTAYQGTTRCKCHIYKWRWDDKIVISDIDGTI 906

Query: 370  TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
            TKSDVLGH+LPI+GKDWAQ+GV +LFTKIK NGYKLLYLSARAIGQ++VTREYL+S++Q 
Sbjct: 907  TKSDVLGHILPIVGKDWAQSGVAQLFTKIKNNGYKLLYLSARAIGQAKVTREYLKSIRQG 966

Query: 430  DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
            DL+LPEGP+LLNPTSL++AFH EVIEKKP+EFKISCL DI ALFP  ++PFYAGYGN++N
Sbjct: 967  DLSLPEGPLLLNPTSLISAFHREVIEKKPEEFKISCLSDIQALFPEGSKPFYAGYGNRIN 1026

Query: 490  DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFS 549
            DVW+Y+AVGIP  RIFTIN RGE+KHE+TQTFQS+YSNMS++VD +FP+  E  + E FS
Sbjct: 1027 DVWAYRAVGIPTMRIFTINHRGELKHELTQTFQSSYSNMSFIVDHLFPAWREDAADE-FS 1085

Query: 550  QFVYWREPICETLP 563
             F YWR+PI E  P
Sbjct: 1086 HFAYWRDPIPEVPP 1099

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204225|gb|EFN83032.1| Lipin-2 [Harpegnathos saltator]

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 187/251 (74%), Positives = 225/251 (89%), Gaps = 1/251 (0%)

Query: 310  HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
            ++KTLRL+SEQI  L L+ G NEV FSVTTAYQGTTRCKC+++KW+W+DKIVISDIDGTI
Sbjct: 853  YRKTLRLSSEQIVSLGLKDGPNEVVFSVTTAYQGTTRCKCHIYKWKWDDKIVISDIDGTI 912

Query: 370  TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
            TKSDVLGH+LPI+GKDWAQ+GV +LFTKIK NGYKLLYLSARAIGQ++VTREYL+S++Q 
Sbjct: 913  TKSDVLGHILPIVGKDWAQSGVAQLFTKIKNNGYKLLYLSARAIGQAKVTREYLKSIRQG 972

Query: 430  DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
            DL+LPEGP+LLNPTSL++AFH EVIEKKP+EFKISCL DI ALFP  ++PFYAGYGN++N
Sbjct: 973  DLSLPEGPLLLNPTSLISAFHREVIEKKPEEFKISCLSDIQALFPEGSKPFYAGYGNRIN 1032

Query: 490  DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFS 549
            DVW+Y+AVGIP+ RIFTIN RGE+KHE+TQTFQS+YSNMS++VD +FP+  E  + E FS
Sbjct: 1033 DVWAYRAVGIPIMRIFTINHRGELKHELTQTFQSSYSNMSFIVDHLFPAWREDAADE-FS 1091

Query: 550  QFVYWREPICE 560
             F YWREPI E
Sbjct: 1092 NFAYWREPIPE 1102

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350423404|ref|XP_003493471.1| PREDICTED: phosphatidate phosphatase LPIN1-like [Bombus impatiens]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 186/251 (74%), Positives = 224/251 (89%), Gaps = 1/251 (0%)

Query: 310  HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
            ++KTLRL+S QIA L L+ G NEV FSVTTAYQGTTRCKC+++KWRW+DKIVISDIDGTI
Sbjct: 846  YRKTLRLSSAQIASLNLKDGANEVVFSVTTAYQGTTRCKCHIYKWRWDDKIVISDIDGTI 905

Query: 370  TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
            TKSDVLGH+LPI+GKDWAQ+GV +LFTKIK NGYKLLYLSARAIGQ++VTREYL+S++Q 
Sbjct: 906  TKSDVLGHILPIVGKDWAQSGVAQLFTKIKNNGYKLLYLSARAIGQAKVTREYLKSIRQG 965

Query: 430  DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
            DL+LPEGP+LLNPTSL++AFH EVIE+KP+EFKISCL DI ALFP  ++PFYAGYGN++N
Sbjct: 966  DLSLPEGPLLLNPTSLISAFHREVIERKPEEFKISCLSDIQALFPEGSKPFYAGYGNRIN 1025

Query: 490  DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFS 549
            DVW+Y+AVGIP  RIFTIN RGE+KHE+TQTFQS+YSNMS++VD +FP+  E  + E FS
Sbjct: 1026 DVWAYRAVGIPTMRIFTINHRGELKHELTQTFQSSYSNMSFIVDHLFPAWREEAADE-FS 1084

Query: 550  QFVYWREPICE 560
             F YWR+PI E
Sbjct: 1085 NFAYWRDPIPE 1095

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720234|ref|XP_003398546.1| PREDICTED: phosphatidate phosphatase LPIN2-like [Bombus terrestris]

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 186/251 (74%), Positives = 224/251 (89%), Gaps = 1/251 (0%)

Query: 310  HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
            ++KTLRL+S QIA L L+ G NEV FSVTTAYQGTTRCKC+++KWRW+DKIVISDIDGTI
Sbjct: 846  YRKTLRLSSTQIASLNLKDGANEVVFSVTTAYQGTTRCKCHIYKWRWDDKIVISDIDGTI 905

Query: 370  TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
            TKSDVLGH+LPI+GKDWAQ+GV +LFTKIK NGYKLLYLSARAIGQ++VTREYL+S++Q 
Sbjct: 906  TKSDVLGHILPIVGKDWAQSGVAQLFTKIKNNGYKLLYLSARAIGQAKVTREYLKSIRQG 965

Query: 430  DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
            DL+LPEGP+LLNPTSL++AFH EVIE+KP+EFKISCL DI ALFP  ++PFYAGYGN++N
Sbjct: 966  DLSLPEGPLLLNPTSLISAFHREVIERKPEEFKISCLSDIQALFPEGSKPFYAGYGNRIN 1025

Query: 490  DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFS 549
            DVW+Y+AVGIP  RIFTIN RGE+KHE+TQTFQS+YSNMS++VD +FP+  E  + E FS
Sbjct: 1026 DVWAYRAVGIPTMRIFTINHRGELKHELTQTFQSSYSNMSFIVDHLFPAWREEAADE-FS 1084

Query: 550  QFVYWREPICE 560
             F YWR+PI E
Sbjct: 1085 NFAYWRDPIPE 1095

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021524|gb|EGI61889.1| Lipin-2 [Acromyrmex echinatior]

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 186/251 (74%), Positives = 225/251 (89%), Gaps = 1/251 (0%)

Query: 310  HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
            ++KTLRL+SEQIA L+L+ G NEV FSVTTAYQGT RCKC+++KW+W+DKIVISDIDGTI
Sbjct: 797  YRKTLRLSSEQIASLDLKDGANEVVFSVTTAYQGTKRCKCHIYKWKWDDKIVISDIDGTI 856

Query: 370  TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
            TKSDVLGH+LPI+GKDWAQ+GV +LFTKIK NGYKLLYLSARAIGQ+  TREYL++++Q 
Sbjct: 857  TKSDVLGHILPIVGKDWAQSGVAQLFTKIKNNGYKLLYLSARAIGQAGGTREYLRNLRQG 916

Query: 430  DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
            DLTLPEGP+LLNPTSL+ AFH EVIEKKP+EFKISCL+DI ALFP  ++PFYAGYGN++N
Sbjct: 917  DLTLPEGPLLLNPTSLILAFHREVIEKKPEEFKISCLKDIQALFPEGSEPFYAGYGNRIN 976

Query: 490  DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFS 549
            DVW+Y+AVGIP+ RIFTIN RGE+KHE+TQTFQS+YSNMS++VDQ+FP+  E  + E FS
Sbjct: 977  DVWAYRAVGIPIMRIFTINHRGELKHELTQTFQSSYSNMSFIVDQVFPARREDATDE-FS 1035

Query: 550  QFVYWREPICE 560
             F YWR+PI E
Sbjct: 1036 NFAYWRDPIPE 1046

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786485|ref|XP_393684.4| PREDICTED: phosphatidate phosphatase LPIN1-like [Apis mellifera]

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 185/251 (73%), Positives = 225/251 (89%), Gaps = 1/251 (0%)

Query: 310  HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
            ++KTLRL+S QIA L L+ G NEV FSVTTAYQGTTRCKC+++KW+W+DKIVISDIDGTI
Sbjct: 830  YRKTLRLSSVQIASLNLKDGANEVVFSVTTAYQGTTRCKCHIYKWKWDDKIVISDIDGTI 889

Query: 370  TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
            TKSDVLGH+LPI+GKDWAQ+GV +LFTKIK NGYKLLYLSARAIGQ++VTREYL+S++Q 
Sbjct: 890  TKSDVLGHILPIVGKDWAQSGVAQLFTKIKNNGYKLLYLSARAIGQAKVTREYLKSIRQG 949

Query: 430  DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
            DL+LP+GP+LLNPTSL++AFH EVIE+KP+EFKISCL DI ALFP  ++PFYAGYGN++N
Sbjct: 950  DLSLPDGPLLLNPTSLISAFHREVIERKPEEFKISCLSDIQALFPEGSKPFYAGYGNRIN 1009

Query: 490  DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFS 549
            DVW+Y+AVGIP  RIFTIN RGE+KHE+TQTFQS+YSNMS++VD +FP+  E  + E FS
Sbjct: 1010 DVWAYRAVGIPTMRIFTINHRGELKHELTQTFQSSYSNMSFIVDHLFPAWREDAADE-FS 1068

Query: 550  QFVYWREPICE 560
             FVYWR+PI E
Sbjct: 1069 NFVYWRDPIPE 1079

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017732|ref|XP_003692801.1| PREDICTED: phosphatidate phosphatase LPIN2-like [Apis florea]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 185/251 (73%), Positives = 225/251 (89%), Gaps = 1/251 (0%)

Query: 310  HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
            ++KTLRL+S QIA L L+ G NEV FSVTTAYQGTTRCKC+++KW+W+DKIVISDIDGTI
Sbjct: 829  YRKTLRLSSVQIASLNLKDGANEVVFSVTTAYQGTTRCKCHIYKWKWDDKIVISDIDGTI 888

Query: 370  TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
            TKSDVLGH+LPI+GKDWAQ+GV +LFTKIK NGYKLLYLSARAIGQ++VTREYL+S++Q 
Sbjct: 889  TKSDVLGHILPIVGKDWAQSGVAQLFTKIKNNGYKLLYLSARAIGQAKVTREYLKSIRQG 948

Query: 430  DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
            DL+LP+GP+LLNPTSL++AFH EVIE+KP+EFKISCL DI ALFP  ++PFYAGYGN++N
Sbjct: 949  DLSLPDGPLLLNPTSLISAFHREVIERKPEEFKISCLSDIQALFPEGSKPFYAGYGNRIN 1008

Query: 490  DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFS 549
            DVW+Y+AVGIP  RIFTIN RGE+KHE+TQTFQS+YSNMS++VD +FP+  E  + E FS
Sbjct: 1009 DVWAYRAVGIPTMRIFTINHRGELKHELTQTFQSSYSNMSFIVDHLFPAWREDAADE-FS 1067

Query: 550  QFVYWREPICE 560
             FVYWR+PI E
Sbjct: 1068 NFVYWRDPIPE 1078

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239526|ref|XP_975581.2| PREDICTED: similar to CG8709 CG8709-PB [Tribolium castaneum]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 186/261 (71%), Positives = 228/261 (87%), Gaps = 4/261 (1%)

Query: 306 LNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDI 365
           L+   +KTLRL+S+QIA L LR GMNE+ FSVTTAYQGTTRC C+L+KW+W+DKIVISDI
Sbjct: 638 LSEKCRKTLRLSSKQIASLNLRDGMNEIVFSVTTAYQGTTRCTCHLYKWKWDDKIVISDI 697

Query: 366 DGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425
           DGTITKSDVLGH+LPI+GKDWAQ+GV +LF KIK NGYKLLYLSARAIGQ+R+TREYL+S
Sbjct: 698 DGTITKSDVLGHILPIVGKDWAQSGVAQLFNKIKGNGYKLLYLSARAIGQARITREYLRS 757

Query: 426 VKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYG 485
           +KQ +LT+P+GP+LLNPTSL+ AFH EVIEKKP++FKISC+ DI ALFP  + PFYAGYG
Sbjct: 758 IKQGNLTMPDGPILLNPTSLITAFHREVIEKKPEQFKISCMSDIKALFPSESNPFYAGYG 817

Query: 486 NKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSS 545
           N++NDVW+Y+AVGIP+ RIFTIN +GE+KHE+TQTFQSTYS M+Y VDQ+FP  +E  ++
Sbjct: 818 NRINDVWAYRAVGIPIVRIFTINPKGELKHELTQTFQSTYSTMTYYVDQLFPPLIE--AA 875

Query: 546 EDFSQFVYWRE--PICETLPE 564
            D+SQF YWR+  P+ E LPE
Sbjct: 876 NDYSQFAYWRDPLPVVEELPE 896

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307186413|gb|EFN72047.1| Lipin-2 [Camponotus floridanus]

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/251 (73%), Positives = 226/251 (90%), Gaps = 1/251 (0%)

Query: 310  HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
            ++KTLRL+SEQIA L+L+ G NEV FSVTTAYQGT RCKC+++KW+W+DKIVISDIDGTI
Sbjct: 818  YRKTLRLSSEQIASLDLKDGANEVVFSVTTAYQGTKRCKCHIYKWKWDDKIVISDIDGTI 877

Query: 370  TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
            TKSDVLGH+LPI+GKDWAQ+GV +LFTKIK N YKLLYLSARAIGQ+  TREYL++++Q 
Sbjct: 878  TKSDVLGHILPIVGKDWAQSGVAQLFTKIKNNSYKLLYLSARAIGQAGGTREYLRNLRQG 937

Query: 430  DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
            DLTLPEGP+LLNPTSL+ AFH EVIEKKP+EFKISCL+DI ALFP  ++PFYAGYGN++N
Sbjct: 938  DLTLPEGPLLLNPTSLILAFHREVIEKKPEEFKISCLKDIQALFPEGSEPFYAGYGNRIN 997

Query: 490  DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFS 549
            DVW+Y+AVGIP+ RIFTIN RGE+KHE+TQTFQS+YSNMS++VD +FP+  E  ++E+FS
Sbjct: 998  DVWAYRAVGIPIMRIFTINHRGELKHELTQTFQSSYSNMSFIVDHVFPAWRED-ATEEFS 1056

Query: 550  QFVYWREPICE 560
             FVYWR+PI E
Sbjct: 1057 NFVYWRDPIPE 1067

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	567
FB|FBgn0263593	1089	Lpin "Lipin" [Drosophila melan	0.504	0.262	0.609	3e-92
ZFIN|ZDB-GENE-060503-153	905	lipin2 "lipin 2" [Danio rerio	0.532	0.333	0.487	6.6e-79
UNIPROTKB|Q92539	896	LPIN2 "Phosphatidate phosphata	0.460	0.291	0.539	7.5e-78
RGD|1588534	844	Lpin3 "lipin 3" [Rattus norveg	0.493	0.331	0.498	1.8e-76
UNIPROTKB|F1LMI0	854	Lpin3 "Protein Lpin3" [Rattus	0.493	0.327	0.498	1.8e-76
RGD|1304588	894	Lpin2 "lipin 2" [Rattus norveg	0.442	0.280	0.549	2.9e-76
UNIPROTKB|F1SDV4	859	LPIN3 "Uncharacterized protein	0.439	0.289	0.561	3.1e-76
UNIPROTKB|E1BWY2	902	LPIN1 "Uncharacterized protein	0.513	0.322	0.492	1e-75
UNIPROTKB|Q9BQK8	851	LPIN3 "Phosphatidate phosphata	0.439	0.292	0.549	1.7e-75
RGD|1307646	924	Lpin1 "lipin 1" [Rattus norveg	0.444	0.272	0.533	4.5e-75

FB|FBgn0263593 Lpin "Lipin" [Drosophila melanogaster (taxid:7227)]

 Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
 Identities = 178/292 (60%), Positives = 227/292 (77%)

Query:    10 EITDQAVSSDSDEDMIRNKRGL-NANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQG 68
             E T   V +  +  M  NK       +KK+LRL+S  I  L L+ GMNE+EFSVTTAYQG
Sbjct:   732 ENTSALVDNLEELTMASNKSDEPKERYKKSLRLSSAAIKKLNLKEGMNEIEFSVTTAYQG 791

Query:    69 TTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGY 128
             TTRCKCYLF+W+ NDK+VISDIDGTITKSDVLGH+LP++GKDWAQ GV +LF+KI++NGY
Sbjct:   792 TTRCKCYLFRWKHNDKVVISDIDGTITKSDVLGHILPMVGKDWAQLGVAQLFSKIEQNGY 851

Query:   129 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKI 188
             KLLYLSARAIGQSRVTREYL+S++Q ++ LP+GP+LLNPTSL++AFH EVIEKKP++FKI
Sbjct:   852 KLLYLSARAIGQSRVTREYLRSIRQGNVMLPDGPLLLNPTSLISAFHREVIEKKPEQFKI 911

Query:   189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQS 248
             +CL DI  LFP + +PFYAGYGN++NDVW+Y+AVGIP+ RIFTIN++GE+KHE+TQTFQS
Sbjct:   912 ACLSDIRDLFP-DKEPFYAGYGNRINDVWAYRAVGIPIMRIFTINTKGELKHELTQTFQS 970

Query:   249 T-YSNMSYLVDQMFPSSLEGTSSEDFTTMAEILNQIPEITDQAVSSDSDEDM 299
             + Y N S  VD+ FP     T+ ++F    +I +      +   S D D D+
Sbjct:   971 SGYINQSLEVDEYFPLL---TNQDEFDYRTDIFDDEESEEELQFSDDYDVDV 1019

GO:0035183 "female germline ring canal inner rim" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0008195 "phosphatidate phosphatase activity" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0019217 "regulation of fatty acid metabolic process" evidence=IMP

GO:0010565 "regulation of cellular ketone metabolic process" evidence=IMP

GO:0042594 "response to starvation" evidence=IMP

GO:0055088 "lipid homeostasis" evidence=IMP

GO:0019432 "triglyceride biosynthetic process" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0030514 "negative regulation of BMP signaling pathway" evidence=IGI;IMP

GO:0007474 "imaginal disc-derived wing vein specification" evidence=IMP

ZFIN|ZDB-GENE-060503-153 lipin2 "lipin 2" [Danio rerio (taxid:7955)]

 Score = 770 (276.1 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
 Identities = 153/314 (48%), Positives = 214/314 (68%)

Query:   266 EGTSSEDFTTMAEILNQIPEITDQ-----AVSSDSDEDMIRNK-RGLNANH--KKTLRLT 317
             EG+SS    + A  ++     +D+     + ++ S E  I+++  G  + H  +K+LRL+
Sbjct:   591 EGSSSLSMESHARKVDTRDSSSDEEGKEVSAAASSMERKIQSEPHGHTSTHSYRKSLRLS 650

Query:   318 SEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGH 377
             S QIA L+L+ G N+V FS+TT YQGT RC+  ++ W W+DK++ISDIDGTITKSDV G 
Sbjct:   651 SSQIASLKLKEGPNDVMFSITTQYQGTCRCEGTIYLWNWDDKVIISDIDGTITKSDVFGQ 710

Query:   378 VLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 437
             +LP  GKDW   G+ +L+  + ENGYK LY SARAIG + +TR YLQ V    + LP GP
Sbjct:   711 ILPQFGKDWTHQGIAKLYHSVAENGYKFLYCSARAIGMADMTRGYLQWVNDGGIILPRGP 770

Query:   438 MLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV 497
             ++L+P+SL +AFH EVIEKKP+ FKI CL DI  LF PN  PFYA +GN+ NDV++Y+ V
Sbjct:   771 LMLSPSSLFSAFHREVIEKKPEIFKIECLTDIKNLFLPNKHPFYAAFGNRTNDVFAYKEV 830

Query:   498 GIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPS-SLEGTSS---EDFSQFVY 553
             G+P+ RIFT+N +GE+  E T+  +S+YS +S LVD +FP  S E +S+    +FS F +
Sbjct:   831 GVPVCRIFTVNPKGELIQEQTKGNKSSYSRLSELVDHVFPLLSKEQSSAFSFPEFSTFCF 890

Query:   554 WREPICETLPEDTI 567
             WR+PI E  PED +
Sbjct:   891 WRQPIPEIRPEDLL 904

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008195 "phosphatidate phosphatase activity" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IEA

UNIPROTKB|Q92539 LPIN2 "Phosphatidate phosphatase LPIN2" [Homo sapiens (taxid:9606)]

 Score = 751 (269.4 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
 Identities = 143/265 (53%), Positives = 188/265 (70%)

Query:   305 GLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISD 364
             G   ++KK+LRL+S+QIA L+L  G N+V FS+TT YQGT RC   ++ W WNDKI+ISD
Sbjct:   630 GSTTSYKKSLRLSSDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKIIISD 689

Query:   365 IDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ 424
             IDGTITKSD LG +LP +GKDW   G+ +L+  I ENGYK LY SARAIG + +TR YL 
Sbjct:   690 IDGTITKSDALGQILPQLGKDWTHQGIAKLYHSINENGYKFLYCSARAIGMADMTRGYLH 749

Query:   425 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGY 484
              V  +   LP GP++L+P+SL +AFH EVIEKKP++FKI CL DI  LF P+ QPFYA +
Sbjct:   750 WVNDKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSKQPFYAAF 809

Query:   485 GNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPS-SLEGT 543
             GN+ NDV++Y  VG+P  RIFT+N +GE+  E T+  +S+Y  +S LV+ +FP  S E  
Sbjct:   810 GNRPNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLSKEQN 869

Query:   544 SS---EDFSQFVYWREPICETLPED 565
             S+    +FS F YWR+PI E   +D
Sbjct:   870 SAFPCPEFSSFCYWRDPIPEVDLDD 894

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0006629 "lipid metabolic process" evidence=ISS

GO:0008195 "phosphatidate phosphatase activity" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=TAS

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=TAS

GO:0019432 "triglyceride biosynthetic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046474 "glycerophospholipid biosynthetic process" evidence=TAS

RGD|1588534 Lpin3 "lipin 3" [Rattus norvegicus (taxid:10116)]

 Score = 750 (269.1 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
 Identities = 142/285 (49%), Positives = 195/285 (68%)

Query:   278 EILNQIPEITDQAVSSDSDEDMIRNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSV 337
             E+L+   ++ D  V  +    +  +  G    +KK+LRL+S QI  L L  G N+V FSV
Sbjct:   552 EVLSSDDDVPDSPVILEVPP-LPSSTPGYVPTYKKSLRLSSNQIRCLNLNEGANDVVFSV 610

Query:   338 TTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTK 397
             TT YQGT RCK  ++ W W+DK+VISDIDGTITKSD LGH+LP +GKDW   G+T L+ K
Sbjct:   611 TTQYQGTCRCKATIYLWNWDDKVVISDIDGTITKSDALGHILPQLGKDWTHQGITSLYHK 670

Query:   398 IKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK 457
             I  NGYK LY SARAIG + +T+ YLQ V +    LP+GP+LL+P+SL +A H EVIEKK
Sbjct:   671 IHLNGYKFLYCSARAIGMAHLTKGYLQWVSEHGCGLPKGPILLSPSSLFSALHREVIEKK 730

Query:   458 PQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEM 517
             P+ FK++CL DI  LF P  QPFYA +GN+ NDV++Y+ VG+P SRIFT+N RGE+  E+
Sbjct:   731 PEVFKVACLSDIQQLFLPQRQPFYAAFGNRPNDVFAYRQVGLPESRIFTVNPRGELIQEL 790

Query:   518 TQTFQSTYSNMSYLVDQMFPSSLEGTSSE----DFSQFVYWREPI 558
              +  +STY  +  +V+ +FP  + G S++    ++S   YWR+P+
Sbjct:   791 IKNHKSTYQRLGEVVELLFPPVVRGPSTDLANPEYSNLCYWRKPL 835

GO:0008195 "phosphatidate phosphatase activity" evidence=ISO

GO:0016311 "dephosphorylation" evidence=ISO

UNIPROTKB|F1LMI0 Lpin3 "Protein Lpin3" [Rattus norvegicus (taxid:10116)]

 Score = 750 (269.1 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
 Identities = 142/285 (49%), Positives = 195/285 (68%)

Query:   278 EILNQIPEITDQAVSSDSDEDMIRNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSV 337
             E+L+   ++ D  V  +    +  +  G    +KK+LRL+S QI  L L  G N+V FSV
Sbjct:   562 EVLSSDDDVPDSPVILEVPP-LPSSTPGYVPTYKKSLRLSSNQIRCLNLNEGANDVVFSV 620

Query:   338 TTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTK 397
             TT YQGT RCK  ++ W W+DK+VISDIDGTITKSD LGH+LP +GKDW   G+T L+ K
Sbjct:   621 TTQYQGTCRCKATIYLWNWDDKVVISDIDGTITKSDALGHILPQLGKDWTHQGITSLYHK 680

Query:   398 IKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK 457
             I  NGYK LY SARAIG + +T+ YLQ V +    LP+GP+LL+P+SL +A H EVIEKK
Sbjct:   681 IHLNGYKFLYCSARAIGMAHLTKGYLQWVSEHGCGLPKGPILLSPSSLFSALHREVIEKK 740

Query:   458 PQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEM 517
             P+ FK++CL DI  LF P  QPFYA +GN+ NDV++Y+ VG+P SRIFT+N RGE+  E+
Sbjct:   741 PEVFKVACLSDIQQLFLPQRQPFYAAFGNRPNDVFAYRQVGLPESRIFTVNPRGELIQEL 800

Query:   518 TQTFQSTYSNMSYLVDQMFPSSLEGTSSE----DFSQFVYWREPI 558
              +  +STY  +  +V+ +FP  + G S++    ++S   YWR+P+
Sbjct:   801 IKNHKSTYQRLGEVVELLFPPVVRGPSTDLANPEYSNLCYWRKPL 845

GO:0008195 "phosphatidate phosphatase activity" evidence=IEA

RGD|1304588 Lpin2 "lipin 2" [Rattus norvegicus (taxid:10116)]

 Score = 747 (268.0 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
 Identities = 140/255 (54%), Positives = 185/255 (72%)

Query:   308 ANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDG 367
             A++KK+LRL+S+QIA L+L  G N+V FS+TT YQGT RC   ++ W WNDK++ISDIDG
Sbjct:   631 ASYKKSLRLSSDQIAKLKLHDGPNDVVFSITTQYQGTCRCAGTIYLWNWNDKVIISDIDG 690

Query:   368 TITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVK 427
             TITKSD LG +LP +GKDW   G+ RL+  I ENGYK LY SARAIG + +TR YL  V 
Sbjct:   691 TITKSDALGQILPQLGKDWTHQGIARLYHSINENGYKFLYCSARAIGMADMTRGYLHWVN 750

Query:   428 QEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNK 487
              +   LP GP++L+P+SL +AFH EVIEKKP++FKI CL DI  LF P+ QPFYA +GN+
Sbjct:   751 DKGTILPRGPLMLSPSSLFSAFHREVIEKKPEKFKIECLNDIKNLFAPSRQPFYAAFGNR 810

Query:   488 VNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPS-SLEGTSS- 545
              NDV++Y  VG+P  RIFT+N +GE+  E T+  +S+Y  +S LV+ +FP  + E  S+ 
Sbjct:   811 PNDVYAYTQVGVPDCRIFTVNPKGELIQERTKGNKSSYHRLSELVEHVFPLLNKEQNSAF 870

Query:   546 --EDFSQFVYWREPI 558
                +FS F YWR+PI
Sbjct:   871 PCPEFSSFCYWRDPI 885

GO:0003713 "transcription coactivator activity" evidence=IEA;ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISO

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0006629 "lipid metabolic process" evidence=IEA;ISO

GO:0008195 "phosphatidate phosphatase activity" evidence=IEA;ISO

GO:0016311 "dephosphorylation" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

UNIPROTKB|F1SDV4 LPIN3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
 Identities = 142/253 (56%), Positives = 186/253 (73%)

Query:   310 HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
             +KK+LRL+S QI  L L+ G NEV FSVTT YQGT RC+  ++ W+W+DK+VISDIDGTI
Sbjct:   598 YKKSLRLSSSQIRRLNLQEGANEVVFSVTTQYQGTCRCRATIYLWKWDDKVVISDIDGTI 657

Query:   370 TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
             TKSD LGH+LP +GKDW   G+T LF KI  NGYK LY SARAIG + +T+ YLQ V + 
Sbjct:   658 TKSDALGHILPQLGKDWTHQGITSLFHKIHLNGYKFLYCSARAIGMADLTKGYLQWVSER 717

Query:   430 DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
               +LPEGP+LL+P+SL +A H EVIEKKP+ FKI+CL DI  LF P  QPFYA +GN+ N
Sbjct:   718 GCSLPEGPILLSPSSLFSALHREVIEKKPEVFKIACLSDIQQLFLPQEQPFYAAFGNRPN 777

Query:   490 DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSE--- 546
             DV +Y+ VG+P SRIFT+N RGE+  E+ +  +STY  +S +V+ +FP    G S++   
Sbjct:   778 DVTAYRQVGLPTSRIFTVNPRGELSQELLKNHKSTYERLSDVVELLFPPVARGPSADLAN 837

Query:   547 -DFSQFVYWREPI 558
              ++S F YWR+P+
Sbjct:   838 PEYSNFCYWRKPL 850

GO:0008195 "phosphatidate phosphatase activity" evidence=IEA

UNIPROTKB|E1BWY2 LPIN1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
 Identities = 156/317 (49%), Positives = 210/317 (66%)

Query:   260 MFPSSLEGTSSEDFTTMAEILNQIPEITDQAVSSDSDEDMIRNKRG-LNAN--------- 309
             M  S L+G  S   T MA        I D++ SSD D    +   G L AN         
Sbjct:   581 MSGSRLKGEDSSQMT-MAN------RIKDESSSSDEDPRAAKQNLGSLQANSSHLSLLSG 633

Query:   310 --HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDG 367
               +KKTLRLTS+Q+  L+L++G N+V FSVTT YQGT RC+  ++ W W+DK++ISDIDG
Sbjct:   634 VSYKKTLRLTSDQLKSLKLKNGPNDVTFSVTTQYQGTCRCEGTIYLWNWDDKVIISDIDG 693

Query:   368 TITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVK 427
             TIT+SD LGH+LP +GKDW   G+ +L+ K+ +NGYK LY SARAIG + +TR YL  V 
Sbjct:   694 TITRSDTLGHILPTLGKDWTHQGIAKLYHKVSQNGYKFLYCSARAIGMADMTRGYLHWVN 753

Query:   428 QEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNK 487
             +    LP+GP+LL+P+SL +A H EVIEKKP++FK+ CL DI  LF PNT+PFYA +GN+
Sbjct:   754 ERGTVLPQGPVLLSPSSLFSALHREVIEKKPEKFKVQCLTDIKNLFYPNTEPFYAAFGNR 813

Query:   488 VNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSED 547
               DV+SY+ VG+ L+RIFT+N +GE+  E  +T  S+Y  +  +VD +FP  L+ + S D
Sbjct:   814 PADVYSYKQVGVSLNRIFTVNPKGELIQEHAKTNISSYVRLCEVVDHIFPL-LKRSHSSD 872

Query:   548 F------SQFVYWREPI 558
             F      SQF YWREP+
Sbjct:   873 FPCSDTYSQFTYWREPL 889

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000266 "mitochondrial fission" evidence=IEA

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006642 "triglyceride mobilization" evidence=IEA

GO:0008195 "phosphatidate phosphatase activity" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=IEA

GO:0031065 "positive regulation of histone deacetylation" evidence=IEA

GO:0031529 "ruffle organization" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0032869 "cellular response to insulin stimulus" evidence=IEA

GO:0042826 "histone deacetylase binding" evidence=IEA

GO:0042975 "peroxisome proliferator activated receptor binding" evidence=IEA

GO:0045598 "regulation of fat cell differentiation" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

UNIPROTKB|Q9BQK8 LPIN3 "Phosphatidate phosphatase LPIN3" [Homo sapiens (taxid:9606)]

 Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
 Identities = 139/253 (54%), Positives = 189/253 (74%)

Query:   310 HKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTI 369
             +KK+LRL+S+QI  L L+ G N+V FSVTT YQGT RCK  ++ W+W+DK+VISDIDGTI
Sbjct:   590 YKKSLRLSSDQIRRLNLQEGANDVVFSVTTQYQGTCRCKATIYLWKWDDKVVISDIDGTI 649

Query:   370 TKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 429
             TKSD LGH+LP +GKDW   G+T L+ KI+ NGYK LY SARAIG + +T+ YLQ V + 
Sbjct:   650 TKSDALGHILPQLGKDWTHQGITSLYHKIQLNGYKFLYCSARAIGMADLTKGYLQWVSEG 709

Query:   430 DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVN 489
               +LP+GP+LL+P+SL +A H EVIEKKP+ FK++CL DI  LF P+ QPFYA +GN+ N
Sbjct:   710 GCSLPKGPILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPHGQPFYAAFGNRPN 769

Query:   490 DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSE--- 546
             DV++Y+ VG+P SRIFT+N RGE+  E+ +  +STY  +  +V+ +FP    G S++   
Sbjct:   770 DVFAYRQVGLPESRIFTVNPRGELIQELIKNHKSTYERLGEVVELLFPPVARGPSTDLAN 829

Query:   547 -DFSQFVYWREPI 558
              ++S F YWREP+
Sbjct:   830 PEYSNFCYWREPL 842

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0008195 "phosphatidate phosphatase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=TAS

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046474 "glycerophospholipid biosynthetic process" evidence=TAS

RGD|1307646 Lpin1 "lipin 1" [Rattus norvegicus (taxid:10116)]

 Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
 Identities = 137/257 (53%), Positives = 188/257 (73%)

Query:   307 NANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDID 366
             N ++KKTLRLTSEQ+  L+L++G N+V FSVTT YQGT RC+  ++ W W+DK++ISDID
Sbjct:   655 NVSYKKTLRLTSEQLKSLKLKNGPNDVVFSVTTQYQGTCRCEGTIYLWNWDDKVIISDID 714

Query:   367 GTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSV 426
             GTIT+SD LGH+LP +GKDW   G+ +L+ K+ +NGYK LY SARAIG + +TR YL  V
Sbjct:   715 GTITRSDTLGHILPTLGKDWTHQGIAKLYHKVSQNGYKFLYCSARAIGMADMTRGYLHWV 774

Query:   427 KQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGN 486
              +    LP+GP+LL+P+SL +A H EVIEKKP++FK+ CL DI  LF PNT+PFYA +GN
Sbjct:   775 NERGTVLPQGPLLLSPSSLFSALHREVIEKKPEKFKVQCLTDIKNLFFPNTEPFYAAFGN 834

Query:   487 KVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFP-----SSLE 541
             +  DV+SY+ VG+ L+RIFT+N +GE+  E  +T  S+Y  +  +VD +FP      S +
Sbjct:   835 RPADVYSYKQVGVSLNRIFTVNPKGELVQEHAKTNISSYVRLCEVVDHVFPLLKRSHSCD 894

Query:   542 GTSSEDFSQFVYWREPI 558
                S+ FS F +WREP+
Sbjct:   895 FPCSDTFSNFTFWREPL 911

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0000266 "mitochondrial fission" evidence=IEA;ISO

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0003713 "transcription coactivator activity" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=ISO

GO:0005667 "transcription factor complex" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005741 "mitochondrial outer membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=ISO

GO:0006642 "triglyceride mobilization" evidence=IEA;ISO

GO:0008195 "phosphatidate phosphatase activity" evidence=IEA;ISO

GO:0009062 "fatty acid catabolic process" evidence=IEA;ISO

GO:0016311 "dephosphorylation" evidence=ISO

GO:0031065 "positive regulation of histone deacetylation" evidence=IEA;ISO

GO:0031100 "organ regeneration" evidence=IEP

GO:0031529 "ruffle organization" evidence=IEA;ISO

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA;ISO

GO:0031965 "nuclear membrane" evidence=ISO

GO:0032869 "cellular response to insulin stimulus" evidence=ISO;IDA

GO:0042826 "histone deacetylase binding" evidence=IEA;ISO

GO:0042975 "peroxisome proliferator activated receptor binding" evidence=IEA;ISO

GO:0045598 "regulation of fat cell differentiation" evidence=IEA;ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q99PI5	LPIN2_MOUSE	3, ., 1, ., 3, ., 4	0.5529	0.4426	0.2810	yes	N/A
Q9BQK8	LPIN3_HUMAN	3, ., 1, ., 3, ., 4	0.5494	0.4391	0.2925	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3.4	LOW CONFIDENCE prediction!
3rd Layer	3.1.3	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	567
smart00775	157	smart00775, LNS2, This domain is found in Saccharo	1e-88
smart00775	157	smart00775, LNS2, This domain is found in Saccharo	1e-88
pfam08235	156	pfam08235, LNS2, LNS2 (Lipin/Ned1/Smp2)	2e-82
pfam08235	156	pfam08235, LNS2, LNS2 (Lipin/Ned1/Smp2)	2e-82
COG5083	580	COG5083, SMP2, Uncharacterized protein involved in	1e-76
COG5083	580	COG5083, SMP2, Uncharacterized protein involved in	1e-76
TIGR01662	132	TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase,	0.004
TIGR01662	132	TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase,	0.004

>gnl|CDD|197870 smart00775, LNS2, This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins

 Score =  269 bits (691), Expect = 1e-88
 Identities = 102/157 (64%), Positives = 120/157 (76%)

Query: 85  IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVT 144
           IVISDIDGTITKSDVLGHV+PI+GKDW   GV +L+  I+ NGYK+LYL+AR IGQ+  T
Sbjct: 1   IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRT 60

Query: 145 REYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQP 204
           R YL  +KQ+   LP GP+LL+P  L  A H EVI KKP+ FKI+CLRDI  LFPP   P
Sbjct: 61  RSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKNLFPPQGNP 120

Query: 205 FYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE 241
           FYAG+GN++ DV SY AVGIP SRIFTIN +GEV  E
Sbjct: 121 FYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVHQE 157

SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. Length = 157

>gnl|CDD|197870 smart00775, LNS2, This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins

 Score =  269 bits (691), Expect = 1e-88
 Identities = 102/157 (64%), Positives = 120/157 (76%)

Query: 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVT 419
           IVISDIDGTITKSDVLGHV+PI+GKDW   GV +L+  I+ NGYK+LYL+AR IGQ+  T
Sbjct: 1   IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRT 60

Query: 420 REYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQP 479
           R YL  +KQ+   LP GP+LL+P  L  A H EVI KKP+ FKI+CLRDI  LFPP   P
Sbjct: 61  RSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKNLFPPQGNP 120

Query: 480 FYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE 516
           FYAG+GN++ DV SY AVGIP SRIFTIN +GEV  E
Sbjct: 121 FYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVHQE 157

SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. Length = 157

>gnl|CDD|149348 pfam08235, LNS2, LNS2 (Lipin/Ned1/Smp2)

 Score =  253 bits (649), Expect = 2e-82
 Identities = 93/157 (59%), Positives = 113/157 (71%), Gaps = 1/157 (0%)

Query: 85  IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVT 144
           +VISDIDGTIT SD LGH+L IMGKDW   GV  L  KI+ENGY ++YL+AR  GQ+  T
Sbjct: 1   VVISDIDGTITASDALGHILSIMGKDWVHAGVVDLVRKIQENGYLIIYLTARPDGQADRT 60

Query: 145 REYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQP 204
           R YL   KQ+   LP GP++L+P  L  A H EVI KKP  FKI+CLRDI  LF PN  P
Sbjct: 61  RAYLSQHKQDGYNLPHGPVILSPDRLFAALHREVILKKPLVFKIACLRDIRQLF-PNRNP 119

Query: 205 FYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE 241
           FYAG+GN++ DV  Y++VG+P SRIFT+N +GEV  E
Sbjct: 120 FYAGFGNRIKDVIVYRSVGVPPSRIFTVNPKGEVHQE 156

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain (Pfam: PF04571) and phosphatidylinositol transfer proteins. SMP2 (also known as PAH1) is involved in plasmid maintenance and respiration, and has been identified as a Mg2+-dependent phosphatidate phosphatase (EC:3.1.3.4) that contains a haloacid dehalogenase (HAD)-like domain. Lipin proteins are involved in adipose tissue development and insulin resistance. Length = 156

>gnl|CDD|149348 pfam08235, LNS2, LNS2 (Lipin/Ned1/Smp2)

 Score =  253 bits (649), Expect = 2e-82
 Identities = 93/157 (59%), Positives = 113/157 (71%), Gaps = 1/157 (0%)

Query: 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVT 419
           +VISDIDGTIT SD LGH+L IMGKDW   GV  L  KI+ENGY ++YL+AR  GQ+  T
Sbjct: 1   VVISDIDGTITASDALGHILSIMGKDWVHAGVVDLVRKIQENGYLIIYLTARPDGQADRT 60

Query: 420 REYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQP 479
           R YL   KQ+   LP GP++L+P  L  A H EVI KKP  FKI+CLRDI  LF PN  P
Sbjct: 61  RAYLSQHKQDGYNLPHGPVILSPDRLFAALHREVILKKPLVFKIACLRDIRQLF-PNRNP 119

Query: 480 FYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE 516
           FYAG+GN++ DV  Y++VG+P SRIFT+N +GEV  E
Sbjct: 120 FYAGFGNRIKDVIVYRSVGVPPSRIFTVNPKGEVHQE 156

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain (Pfam: PF04571) and phosphatidylinositol transfer proteins. SMP2 (also known as PAH1) is involved in plasmid maintenance and respiration, and has been identified as a Mg2+-dependent phosphatidate phosphatase (EC:3.1.3.4) that contains a haloacid dehalogenase (HAD)-like domain. Lipin proteins are involved in adipose tissue development and insulin resistance. Length = 156

>gnl|CDD|227415 COG5083, SMP2, Uncharacterized protein involved in plasmid maintenance [General function prediction only]

 Score =  253 bits (647), Expect = 1e-76
 Identities = 110/227 (48%), Positives = 152/227 (66%), Gaps = 5/227 (2%)

Query: 37  KTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITK 96
            T++L S+Q+  L L+ G N ++F V     G      Y+F WR N KIV+SDIDGTITK
Sbjct: 332 GTIKLNSDQLRNLNLKYGKNLLKFYVE---GGKAIATMYIFVWRNNKKIVVSDIDGTITK 388

Query: 97  SDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL 156
           SD LGHV  ++GKDW  NGV +L+T I  NGYK+ YL++R+ GQ+  TR YL++++Q   
Sbjct: 389 SDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGY 448

Query: 157 TLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDV 216
            LP+GP++L+P   + A + E+I +KP+ FKI+ L D+ +LF     PFYAG+GN++ DV
Sbjct: 449 KLPDGPVILSPDRTMAALYRELILRKPEVFKIAYLNDLKSLF-IEFDPFYAGFGNRITDV 507

Query: 217 WSYQAVGIPLSRIFTINSRGEVKHEMTQT-FQSTYSNMSYLVDQMFP 262
            SY  VGIP SRIFTIN  GEV  E+    ++S+Y  M+ LVD  FP
Sbjct: 508 ISYSNVGIPKSRIFTINKNGEVHGELLIVSYRSSYKQMNELVDHFFP 554

Length = 580

>gnl|CDD|227415 COG5083, SMP2, Uncharacterized protein involved in plasmid maintenance [General function prediction only]

 Score =  253 bits (647), Expect = 1e-76
 Identities = 110/227 (48%), Positives = 152/227 (66%), Gaps = 5/227 (2%)

Query: 312 KTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITK 371
            T++L S+Q+  L L+ G N ++F V     G      Y+F WR N KIV+SDIDGTITK
Sbjct: 332 GTIKLNSDQLRNLNLKYGKNLLKFYVE---GGKAIATMYIFVWRNNKKIVVSDIDGTITK 388

Query: 372 SDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL 431
           SD LGHV  ++GKDW  NGV +L+T I  NGYK+ YL++R+ GQ+  TR YL++++Q   
Sbjct: 389 SDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGY 448

Query: 432 TLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDV 491
            LP+GP++L+P   + A + E+I +KP+ FKI+ L D+ +LF     PFYAG+GN++ DV
Sbjct: 449 KLPDGPVILSPDRTMAALYRELILRKPEVFKIAYLNDLKSLF-IEFDPFYAGFGNRITDV 507

Query: 492 WSYQAVGIPLSRIFTINSRGEVKHEMTQT-FQSTYSNMSYLVDQMFP 537
            SY  VGIP SRIFTIN  GEV  E+    ++S+Y  M+ LVD  FP
Sbjct: 508 ISYSNVGIPKSRIFTINKNGEVHGELLIVSYRSSYKQMNELVDHFFP 554

Length = 580

>gnl|CDD|233517 TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, subfamily IIIA

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 11/80 (13%)

Query: 84  KIVISDIDGTITKSDVLGHVLPIMGKDWAQ--NGVTRLFTKIKENGYKLLYLSARAIGQS 141
           K V+ D+DGT+T       V  +  +D       V     ++KE GYK++ ++     QS
Sbjct: 1   KGVVLDLDGTLTDD-----VPYVDDEDERILYPEVPDALAELKEAGYKVVIVT----NQS 51

Query: 142 RVTREYLQSVKQEDLTLPEG 161
            + R    S +        G
Sbjct: 52  GIGRGKFSSGRVARRLEELG 71

This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class III subfamilies are characterized by the lack of any domains located between either between the first and second conserved catalytic motifs (as in the Class I subfamilies, TIGR01493, TIGR01509, TIGR01488 and TIGR01494) or between the second and third conserved catalytic motifs (as in the Class II subfamilies, TIGR01460 and TIGR01484) of the superfamily domain. The IIIA subfamily contains five major clades: histidinol-phosphatase (TIGR01261) and histidinol-phosphatase-related protein (TIGR00213) which together form a subfamily (TIGR01656), DNA 3'-phosphatase (TIGR01663, TIGR01664), YqeG (TIGR01668) and YrbI (TIGR01670). In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme [Unknown function, Enzymes of unknown specificity]. Length = 132

>gnl|CDD|233517 TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, subfamily IIIA

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 11/80 (13%)

Query: 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQ--NGVTRLFTKIKENGYKLLYLSARAIGQS 416
           K V+ D+DGT+T       V  +  +D       V     ++KE GYK++ ++     QS
Sbjct: 1   KGVVLDLDGTLTDD-----VPYVDDEDERILYPEVPDALAELKEAGYKVVIVT----NQS 51

Query: 417 RVTREYLQSVKQEDLTLPEG 436
            + R    S +        G
Sbjct: 52  GIGRGKFSSGRVARRLEELG 71

This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class III subfamilies are characterized by the lack of any domains located between either between the first and second conserved catalytic motifs (as in the Class I subfamilies, TIGR01493, TIGR01509, TIGR01488 and TIGR01494) or between the second and third conserved catalytic motifs (as in the Class II subfamilies, TIGR01460 and TIGR01484) of the superfamily domain. The IIIA subfamily contains five major clades: histidinol-phosphatase (TIGR01261) and histidinol-phosphatase-related protein (TIGR00213) which together form a subfamily (TIGR01656), DNA 3'-phosphatase (TIGR01663, TIGR01664), YqeG (TIGR01668) and YrbI (TIGR01670). In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme [Unknown function, Enzymes of unknown specificity]. Length = 132

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	567
KOG2116|consensus	738		100.0
KOG2116|consensus	738		100.0
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	100.0
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	100.0
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	100.0
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	100.0
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	100.0
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	100.0
PHA02530	300	pseT polynucleotide kinase; Provisional	99.01
PHA02530	300	pseT polynucleotide kinase; Provisional	99.0
COG4850	373	Uncharacterized conserved protein [Function unknow	98.99
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	98.79
PF09949	100	DUF2183: Uncharacterized conserved protein (DUF218	98.74
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	98.72
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.71
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	98.66
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.65
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	98.64
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	98.56
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	98.53
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	98.53
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	98.38
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.34
COG4850	373	Uncharacterized conserved protein [Function unknow	98.3
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.22
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.21
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.18
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.18
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.13
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.1
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	97.96
PF09949	100	DUF2183: Uncharacterized conserved protein (DUF218	97.8
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	97.76
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	97.76
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	97.7
PRK13582	205	thrH phosphoserine phosphatase; Provisional	97.69
PRK10976	266	putative hydrolase; Provisional	97.68
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	97.62
PLN02954	224	phosphoserine phosphatase	97.62
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.58
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	97.56
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	97.56
PRK13582	205	thrH phosphoserine phosphatase; Provisional	97.54
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	97.53
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.52
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.51
PLN02954	224	phosphoserine phosphatase	97.51
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	97.51
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.5
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	97.49
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	97.49
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	97.48
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	97.48
PRK10976	266	putative hydrolase; Provisional	97.47
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	97.47
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	97.46
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	97.45
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	97.4
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	97.39
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	97.38
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.37
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.36
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	97.34
PRK10513	270	sugar phosphate phosphatase; Provisional	97.34
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.29
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.28
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	97.27
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	97.26
PF15017	87	AF1Q: Drug resistance and apoptosis regulator	97.24
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.24
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	97.23
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	97.22
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.21
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	97.18
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.16
PRK10513	270	sugar phosphate phosphatase; Provisional	97.15
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	97.14
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	97.13
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	97.12
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.11
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	97.1
PRK10444	248	UMP phosphatase; Provisional	97.1
PF15017	87	AF1Q: Drug resistance and apoptosis regulator	97.09
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	97.06
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	97.05
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.05
PRK08238	479	hypothetical protein; Validated	97.01
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	96.99
PRK10444	248	UMP phosphatase; Provisional	96.95
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	96.9
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	96.87
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.86
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	96.84
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	96.83
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	96.82
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.81
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	96.81
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	96.79
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	96.78
PLN02887	580	hydrolase family protein	96.73
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	96.73
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	96.73
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.72
PTZ00174	247	phosphomannomutase; Provisional	96.72
PLN02645	311	phosphoglycolate phosphatase	96.7
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	96.61
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	96.61
PRK13222	226	phosphoglycolate phosphatase; Provisional	96.6
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	96.6
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	96.58
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	96.56
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	96.54
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	96.53
PTZ00174	247	phosphomannomutase; Provisional	96.51
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	96.49
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	96.49
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	96.49
PRK13226	229	phosphoglycolate phosphatase; Provisional	96.48
PLN02645	311	phosphoglycolate phosphatase	96.47
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	96.46
PRK08238	479	hypothetical protein; Validated	96.45
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	96.45
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	96.44
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	96.43
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	96.43
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	96.42
PRK11133	322	serB phosphoserine phosphatase; Provisional	96.4
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	96.37
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	96.36
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	96.35
PRK13226	229	phosphoglycolate phosphatase; Provisional	96.35
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	96.35
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	96.28
PRK11133	322	serB phosphoserine phosphatase; Provisional	96.23
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	96.23
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	96.19
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.18
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	96.17
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	96.16
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	96.12
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	96.11
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	96.1
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	96.08
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	96.06
PRK13223	272	phosphoglycolate phosphatase; Provisional	96.05
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	96.04
PLN02887	580	hydrolase family protein	96.02
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	96.01
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.01
PRK06769	173	hypothetical protein; Validated	95.98
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	95.9
PRK14988	224	GMP/IMP nucleotidase; Provisional	95.9
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	95.84
PRK14988	224	GMP/IMP nucleotidase; Provisional	95.83
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	95.76
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	95.76
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	95.75
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	95.73
PRK06769	173	hypothetical protein; Validated	95.64
PHA03398	303	viral phosphatase superfamily protein; Provisional	95.61
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	95.54
PRK13223	272	phosphoglycolate phosphatase; Provisional	95.5
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	95.49
PRK13225	273	phosphoglycolate phosphatase; Provisional	95.46
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	95.37
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	95.36
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	95.35
COG0241	181	HisB Histidinol phosphatase and related phosphatas	95.25
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	95.2
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	95.2
PLN02940	382	riboflavin kinase	95.18
PRK13225	273	phosphoglycolate phosphatase; Provisional	95.15
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	95.13
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	95.07
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	95.02
PHA03398	303	viral phosphatase superfamily protein; Provisional	94.95
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	94.94
PRK09449	224	dUMP phosphatase; Provisional	94.91
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	94.88
COG0241	181	HisB Histidinol phosphatase and related phosphatas	94.87
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	94.63
PLN02940	382	riboflavin kinase	94.53
PRK09449	224	dUMP phosphatase; Provisional	94.5
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	94.31
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	94.23
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	94.16
PLN02423	245	phosphomannomutase	94.05
COG2503	274	Predicted secreted acid phosphatase [General funct	93.95
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	93.91
PLN02423	245	phosphomannomutase	93.63
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	93.57
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	93.36
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	93.34
PRK10748	238	flavin mononucleotide phosphatase; Provisional	93.24
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	93.23
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	92.94
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	92.93
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	92.88
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	92.8
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	92.74
COG2503	274	Predicted secreted acid phosphatase [General funct	92.74
PRK10748	238	flavin mononucleotide phosphatase; Provisional	92.67
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	92.46
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	92.4
PRK13288	214	pyrophosphatase PpaX; Provisional	92.31
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	92.23
PLN02382	413	probable sucrose-phosphatase	91.73
COG5663	194	Uncharacterized conserved protein [Function unknow	91.39
PLN02382	413	probable sucrose-phosphatase	91.26
COG0546	220	Gph Predicted phosphatases [General function predi	91.26
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	91.25
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	91.21
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	91.2
COG0546	220	Gph Predicted phosphatases [General function predi	90.98
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	90.72
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	90.68
PRK13222	226	phosphoglycolate phosphatase; Provisional	90.53
COG4359	220	Uncharacterized conserved protein [Function unknow	90.43
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	89.92
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	89.71
PLN03017	366	trehalose-phosphatase	89.61
PRK10563	221	6-phosphogluconate phosphatase; Provisional	89.55
COG3700	237	AphA Acid phosphatase (class B) [General function	89.46
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	89.44
PRK13288	214	pyrophosphatase PpaX; Provisional	89.4
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	89.33
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	89.08
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	88.82
COG5663	194	Uncharacterized conserved protein [Function unknow	88.81
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	88.75
PLN03017	366	trehalose-phosphatase	88.58
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	88.55
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	88.42
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	87.89
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	87.08
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	86.99
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	86.82
PRK11590	211	hypothetical protein; Provisional	86.52
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	86.5
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	85.54
COG4359	220	Uncharacterized conserved protein [Function unknow	85.37
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	85.04
PLN02151	354	trehalose-phosphatase	85.02
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	85.0
cd03016	203	PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX sub	84.57
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	84.52
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	84.48
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	84.46
cd03018	149	PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-lik	84.35
cd03017	140	PRX_BCP Peroxiredoxin (PRX) family, Bacterioferrit	84.3
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	84.04
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	83.94
PLN02151	354	trehalose-phosphatase	83.83
cd03016	203	PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX sub	83.76
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	83.75
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	83.33
COG3700	237	AphA Acid phosphatase (class B) [General function	83.29
PRK10671	834	copA copper exporting ATPase; Provisional	83.23
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	82.93
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	82.74
TIGR02540	153	gpx7 putative glutathione peroxidase Gpx7. This mo	82.28
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	81.58
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	81.56
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	81.51
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	81.46
PTZ00056	199	glutathione peroxidase; Provisional	81.09
PRK11590	211	hypothetical protein; Provisional	80.96
KOG1615|consensus	227		80.94
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	80.64
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	80.26

>KOG2116|consensus

Probab=100.00  E-value=3.7e-100  Score=824.19  Aligned_cols=258  Identities=56%  Similarity=1.009  Sum_probs=252.2

Q ss_pred             CCCccceeeccCCHHHHHhCcCCCCCceeEEEEEeccCCcceeeeEEEEecCCCcEEEEecCCccccCCccccccccccc
Q psy12533         30 GLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGK  109 (567)
Q Consensus        30 ~~~~~~~k~lrlts~qL~~l~Lk~G~N~v~f~v~t~~qG~~~~~~~iylw~~~~kiVISDIDGTITkSD~lG~il~~lGk  109 (567)
                      ...+.|.||||||||||++||||+|.|.|+|+|+|+|||+|+|+|+||||+|++|||||||||||||||++||+||+|||
T Consensus       477 ~~~~qy~rtLrltSEQL~sLnLk~G~N~v~FsisT~~~Gt~~c~~~IYlWkWn~kIVISDIDGTITKSDvLGh~lp~iGk  556 (738)
T KOG2116|consen  477 NPRPQYVRTLRLTSEQLKSLNLKDGKNDVVFSISTQYQGTAQCEGNIYLWKWNDKIVISDIDGTITKSDVLGHVLPMIGK  556 (738)
T ss_pred             CcchhhhhhcccCHHHHhhcCCccCCceeEEEEEecccceEEEeeEEEEEecCCcEEEecCCCceEhhhhhhhhhhhhcC
Confidence            36788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        110 DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKIS  189 (567)
Q Consensus       110 Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~  189 (567)
                      ||||.|||+||++|++|||||||||||||+||++||.||+||+|+|+.||+|||+||||+||+|||||||.|+||+|||+
T Consensus       557 DWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIA  636 (738)
T KOG2116|consen  557 DWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIA  636 (738)
T ss_pred             cchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccccccHHhHHhhhhhcCCCCCCCC-
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGT-  268 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~fP~~~~~~-  268 (567)
                      ||++|++|||+.+||||||||||+||+.+|++||||.+|||||||+|||++++.+++++||.+|+++|||||||+...+ 
T Consensus       637 cL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~~~~~~SY~~l~elVd~mFPplS~~~~  716 (738)
T KOG2116|consen  637 CLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELLKTLKSSYVRLNELVDHMFPPLSRSTS  716 (738)
T ss_pred             HHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCccceEEECCCceehHHHHhhhhhhhhhHHHHHHHhCCCcccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999865 


Q ss_pred             ---CCCcccccccccCcCCCcc
Q psy12533        269 ---SSEDFTTMAEILNQIPEIT  287 (567)
Q Consensus       269 ---~~~~~~~~~~w~~~~~~~~  287 (567)
                         .+++|++|||||+|+|+++
T Consensus       717 ~~~~~~~fs~fnfWr~p~~~v~  738 (738)
T KOG2116|consen  717 DDFPNPEFSNFNFWREPLPEVD  738 (738)
T ss_pred             ccCCccccCCceeecCCCccCC
Confidence               3479999999999999874

>KOG2116|consensus

Probab=100.00  E-value=2.1e-97  Score=802.83  Aligned_cols=262  Identities=57%  Similarity=1.032  Sum_probs=253.8

Q ss_pred             hhhcCCCcceeEEEecCHHHHhcCcCCCCCceeEEEEEecccCeeeeeeeEEeeeCCCeEEEEecCCccccCCccccccc
Q psy12533        301 RNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLP  380 (567)
Q Consensus       301 ~~~~~~~~~~~~sl~ltseqL~~l~L~~G~n~V~f~v~s~~~g~~~~~~~iylw~~~~kiVIsDIDGTiTkSD~~G~~~~  380 (567)
                      .+.....+.|.+|||||||||++||||.|.|.|+|+++|+|||+|.|+|+||||+|++|||||||||||||||++||+||
T Consensus       473 ~sse~~~~qy~rtLrltSEQL~sLnLk~G~N~v~FsisT~~~Gt~~c~~~IYlWkWn~kIVISDIDGTITKSDvLGh~lp  552 (738)
T KOG2116|consen  473 SSSENPRPQYVRTLRLTSEQLKSLNLKDGKNDVVFSISTQYQGTAQCEGNIYLWKWNDKIVISDIDGTITKSDVLGHVLP  552 (738)
T ss_pred             CCCCCcchhhhhhcccCHHHHhhcCCccCCceeEEEEEecccceEEEeeEEEEEecCCcEEEecCCCceEhhhhhhhhhh
Confidence            44444667899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhH
Q psy12533        381 IMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQE  460 (567)
Q Consensus       381 ~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~  460 (567)
                      +|||||||.|||+||++|++|||||||||||+|+||++||.||+||+|+|+.||+|||++|||++|+|||||||.|+||+
T Consensus       553 ~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~  632 (738)
T KOG2116|consen  553 MIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEV  632 (738)
T ss_pred             hhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhhHHhhhhhcCCCCC
Q psy12533        461 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSL  540 (567)
Q Consensus       461 fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~FP~~~  540 (567)
                      |||+||++|++|||+.+||||||||||+||+.+|++||||.+|||||||+|||++++.+++++||.+|+|+|||||||+.
T Consensus       633 FKIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~~~~~~SY~~l~elVd~mFPplS  712 (738)
T KOG2116|consen  633 FKIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELLKTLKSSYVRLNELVDHMFPPLS  712 (738)
T ss_pred             hhHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCccceEEECCCceehHHHHhhhhhhhhhHHHHHHHhCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC----CCCCCCCceecCCCCCCCC
Q psy12533        541 EGT----SSEDFSQFVYWREPICETL  562 (567)
Q Consensus       541 ~~~----~~~~~~~~~~w~~p~~~~~  562 (567)
                      ...    .+++|++|||||.|+|+++
T Consensus       713 ~~~~~~~~~~~fs~fnfWr~p~~~v~  738 (738)
T KOG2116|consen  713 RSTSDDFPNPEFSNFNFWREPLPEVD  738 (738)
T ss_pred             ccccccCCccccCCceeecCCCccCC
Confidence            854    3479999999999999874

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=100.00  E-value=2.5e-72  Score=586.14  Aligned_cols=233  Identities=48%  Similarity=0.847  Sum_probs=225.8

Q ss_pred             CccceeeccCCHHHHHhCcCCCCCceeEEEEEeccCCcceeeeEEEEecCCCcEEEEecCCccccCCccccccccccccc
Q psy12533         32 NANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDW  111 (567)
Q Consensus        32 ~~~~~k~lrlts~qL~~l~Lk~G~N~v~f~v~t~~qG~~~~~~~iylw~~~~kiVISDIDGTITkSD~lG~il~~lGkDw  111 (567)
                      -+.|.++|||+++||.+||||+|.|.+.|.|..   |.+.|+++||||.|+.|+|||||||||||||++||+..++||||
T Consensus       327 ~~d~~~tiklnsdqLr~LnLkyGkn~lkf~V~g---~~a~~t~~ifvwr~n~kiVVsDiDGTITkSD~~Ghv~~miGkdw  403 (580)
T COG5083         327 VTDYNGTIKLNSDQLRNLNLKYGKNLLKFYVEG---GKAIATMYIFVWRNNKKIVVSDIDGTITKSDALGHVKQMIGKDW  403 (580)
T ss_pred             eecccceEEcCChHHhcccCccCcceEEEEEcC---CccEEEEEEEEEeCCCcEEEEecCCcEEehhhHHHHHHHhccch
Confidence            467899999999999999999999999999983   66799999999999999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ||.|||+||.+|.+|||+|+|||||+.||++.||.||+.+.|+|+.||+|||+|+||+.++|++||+|.++||+||++||
T Consensus       404 th~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpdgpviLspd~t~aal~relIlrkpE~FKiayL  483 (580)
T COG5083         404 THNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPDGPVILSPDRTMAALYRELILRKPEVFKIAYL  483 (580)
T ss_pred             hhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCCCCEeeccchhhhhhhhhhhhcChHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecccccc-ccccHHhHHhhhhhcCCCCCCCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQT-FQSTYSNMSYLVDQMFPSSLEGT  268 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~-~~~sY~~l~~~vd~~fP~~~~~~  268 (567)
                      ++|+++|.. ..|||||||||.|||.+|+.||||++||||||.+|||+.|+.+. ++++|.+|+++||||||||...+
T Consensus       484 ndl~slf~e-~~PFyAGFGNriTDvisY~~vgIp~SrIFTIn~~gev~~ell~~sy~~sy~~mne~VDhfFPp~s~~t  560 (580)
T COG5083         484 NDLKSLFIE-FDPFYAGFGNRITDVISYSNVGIPKSRIFTINKNGEVHGELLIVSYRSSYKQMNELVDHFFPPLSPKT  560 (580)
T ss_pred             HHHHHhhCc-CChhhccccccchhheeeccccCChhheEEeccCCcEEEEEEEeehhhHHHHHhhhhhhcCCCCCCcc
Confidence            999999987 67999999999999999999999999999999999999999987 89999999999999999998654

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=100.00  E-value=1.9e-71  Score=579.56  Aligned_cols=245  Identities=47%  Similarity=0.842  Sum_probs=232.0

Q ss_pred             CCcceeEEEecCHHHHhcCcCCCCCceeEEEEEecccCeeeeeeeEEeeeCCCeEEEEecCCccccCCcccccccccCcC
Q psy12533        306 LNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKD  385 (567)
Q Consensus       306 ~~~~~~~sl~ltseqL~~l~L~~G~n~V~f~v~s~~~g~~~~~~~iylw~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkD  385 (567)
                      ..+.|.++++|+++||..|||++|.|.+.|.|.   +|.+.|+++||||.++.|+|||||||||||||++||+..++|||
T Consensus       326 ~~~d~~~tiklnsdqLr~LnLkyGkn~lkf~V~---g~~a~~t~~ifvwr~n~kiVVsDiDGTITkSD~~Ghv~~miGkd  402 (580)
T COG5083         326 AVTDYNGTIKLNSDQLRNLNLKYGKNLLKFYVE---GGKAIATMYIFVWRNNKKIVVSDIDGTITKSDALGHVKQMIGKD  402 (580)
T ss_pred             eeecccceEEcCChHHhcccCccCcceEEEEEc---CCccEEEEEEEEEeCCCcEEEEecCCcEEehhhHHHHHHHhccc
Confidence            345789999999999999999999999999998   56779999999999999999999999999999999999999999


Q ss_pred             CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        386 WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       386 w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      |+|.|||+||.+|..|||+|+|||||+.||+..||.||+.+.|+|+.||+|||+++||+.++|++||+|.++||.|||+|
T Consensus       403 wth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpdgpviLspd~t~aal~relIlrkpE~FKiay  482 (580)
T COG5083         403 WTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPDGPVILSPDRTMAALYRELILRKPEVFKIAY  482 (580)
T ss_pred             hhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCCCCEeeccchhhhhhhhhhhhcChHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccccccc-ccccHhhHHhhhhhcCCCCCCCC-
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQT-FQSTYSNMSYLVDQMFPSSLEGT-  543 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~-~~~sY~~l~~~vd~~FP~~~~~~-  543 (567)
                      |++|+.+|.. .+|||||||||.|||.+|+.||||++|||+||++||++.|+.+. +.++|.+|+|+||||||||.... 
T Consensus       483 Lndl~slf~e-~~PFyAGFGNriTDvisY~~vgIp~SrIFTIn~~gev~~ell~~sy~~sy~~mne~VDhfFPp~s~~t~  561 (580)
T COG5083         483 LNDLKSLFIE-FDPFYAGFGNRITDVISYSNVGIPKSRIFTINKNGEVHGELLIVSYRSSYKQMNELVDHFFPPLSPKTI  561 (580)
T ss_pred             HHHHHHhhCc-CChhhccccccchhheeeccccCChhheEEeccCCcEEEEEEEeehhhHHHHHhhhhhhcCCCCCCccc
Confidence            9999999986 67999999999999999999999999999999999999999987 89999999999999999999743 


Q ss_pred             --CCCCCCCceecCC
Q psy12533        544 --SSEDFSQFVYWRE  556 (567)
Q Consensus       544 --~~~~~~~~~~w~~  556 (567)
                        ....|+.|  |..
T Consensus       562 d~~~~~~~v~--~Sp  574 (580)
T COG5083         562 DFIDHSFSVF--WSP  574 (580)
T ss_pred             cccccccccc--CCC
Confidence              33445544  875

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=100.00  E-value=3.5e-62  Score=459.86  Aligned_cols=157  Identities=62%  Similarity=1.125  Sum_probs=155.1

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  439 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl  439 (567)
                      |||||||||||+||++||+++++|+||+|+|||+||++|++|||+|+||||||+||+++||+||++++|+|++||+|||+
T Consensus         1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~   80 (157)
T PF08235_consen    1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVL   80 (157)
T ss_pred             CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEE
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccc
Q psy12533        440 LNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE  516 (567)
Q Consensus       440 ~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~  516 (567)
                      ++|+++++||+||++.++|++||++||++|+++||...+|||||||||.||+.||++||||++|||+||++|++++|
T Consensus        81 ~sP~~l~~al~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~~~g~~~~~  157 (157)
T PF08235_consen   81 LSPDSLFSALHREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIINPKGEVKQE  157 (157)
T ss_pred             ECCcchhhhhhccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEECCCCeEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999875

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=100.00  E-value=4.3e-61  Score=452.47  Aligned_cols=157  Identities=62%  Similarity=1.125  Sum_probs=155.2

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  164 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll  164 (567)
                      |||||||||||+||++||+++++|+||+|+|||+||++|++|||+|+||||||++|+++||+||++++|+|++||+|||+
T Consensus         1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~   80 (157)
T PF08235_consen    1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVL   80 (157)
T ss_pred             CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEE
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc
Q psy12533        165 LNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE  241 (567)
Q Consensus       165 lsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~  241 (567)
                      ++|++|++||+||++.++|++||++||++|+++||...+|||||||||.||+.||++||||++|||+||++|++++|
T Consensus        81 ~sP~~l~~al~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~~~g~~~~~  157 (157)
T PF08235_consen   81 LSPDSLFSALHREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIINPKGEVKQE  157 (157)
T ss_pred             ECCcchhhhhhccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEECCCCeEecC
Confidence            99999999999999999999999999999999999889999999999999999999999999999999999999875

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>smart00775 LNS2 LNS2 domain

Probab=100.00  E-value=6.2e-44  Score=335.99  Aligned_cols=156  Identities=65%  Similarity=1.142  Sum_probs=152.9

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  439 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl  439 (567)
                      +|+||||||||+||++||+++.+|++|+|+|++++|++++++||+|+|+||||+++++.||.||+.+.|.|+++|+||++
T Consensus         1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li   80 (157)
T smart00775        1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL   80 (157)
T ss_pred             CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533        440 LNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  515 (567)
Q Consensus       440 ~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  515 (567)
                      +++++++.++.+|++.++|++||+++|+.|.++||...+|||+|||||+||+.+|+++|||++|||+|||+|++.+
T Consensus        81 ~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~i~~i~~~~~~~~  156 (157)
T smart00775       81 LSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVHQ  156 (157)
T ss_pred             EcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhhEEEECCCCcccc
Confidence            9999999999999999999999999999999999988999999999999999999999999999999999999875

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>smart00775 LNS2 LNS2 domain

Probab=100.00  E-value=6.8e-44  Score=335.72  Aligned_cols=156  Identities=65%  Similarity=1.142  Sum_probs=152.9

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  164 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll  164 (567)
                      +|+||||||||+||++||+++.+|++|+|+|++++|++++++||+|+||||||+++++.||.||+.+.|.|+++|.||++
T Consensus         1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li   80 (157)
T smart00775        1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL   80 (157)
T ss_pred             CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceec
Q psy12533        165 LNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  240 (567)
Q Consensus       165 lsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  240 (567)
                      +++++++.++.+|++.++|++||+++|++|+++||+..+|||+|||||++|+.+|+++|||++|||+|||+|++.+
T Consensus        81 ~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~i~~i~~~~~~~~  156 (157)
T smart00775       81 LSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVHQ  156 (157)
T ss_pred             EcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhhEEEECCCCcccc
Confidence            9999999999999999999999999999999999988999999999999999999999999999999999999875

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.01  E-value=5.1e-10  Score=114.15  Aligned_cols=178  Identities=18%  Similarity=0.186  Sum_probs=124.2

Q ss_pred             eccCCHHHHHhCcCCCCCceeEEE-EEeccCCcc-eeeeEE--EE-ecCCCcEEEEecCCccccCCccccc-cccccccc
Q psy12533         38 TLRLTSEQIAGLELRSGMNEVEFS-VTTAYQGTT-RCKCYL--FK-WRWNDKIVISDIDGTITKSDVLGHV-LPIMGKDW  111 (567)
Q Consensus        38 ~lrlts~qL~~l~Lk~G~N~v~f~-v~t~~qG~~-~~~~~i--yl-w~~~~kiVISDIDGTITkSD~lG~i-l~~lGkDw  111 (567)
                      -|..+.+++..++.++|...+.-. +.+++.-.. ..+.+.  +. .....+++++|+||||......+++ +.....+-
T Consensus       108 ~l~~~~e~~~~R~~~R~~~~~~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~  187 (300)
T PHA02530        108 VFDVPVEELVKRNRKRGERAVPEDVLRSMFKQMKEYRGLVWPVYTADPGLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDK  187 (300)
T ss_pred             EeCCCHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCCCCceeccCCCCCCEEEEECCCcCcCCCCCCccchhhcccCC
Confidence            456778999999999987776544 444443221 122222  22 2233469999999999987766554 33344556


Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhH-HHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQE-FKISC  190 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~-fKi~~  190 (567)
                      ..+|+.++.+.++++|++++++|+|+..++..|.+||..     .+.+--.+...++  ...++|+...++|+- .+..+
T Consensus       188 ~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~-----~~~~f~~i~~~~~--~~~~~~~~~~~kp~p~~~~~~  260 (300)
T PHA02530        188 PNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQ-----TDIWFDDLIGRPP--DMHFQREQGDKRPDDVVKEEI  260 (300)
T ss_pred             CChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHH-----cCCchhhhhCCcc--hhhhcccCCCCCCcHHHHHHH
Confidence            678999999999999999999999999999999999977     3322223333331  334678877777764 78888


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      |+.+...    ...-...+|++.+|+.+++++||++
T Consensus       261 l~~~~~~----~~~~~~~vgD~~~d~~~a~~~Gi~~  292 (300)
T PHA02530        261 FWEKIAP----KYDVLLAVDDRDQVVDMWRRIGLEC  292 (300)
T ss_pred             HHHHhcc----CceEEEEEcCcHHHHHHHHHhCCeE
Confidence            8775221    1123678999999999999999985

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.00  E-value=6.2e-10  Score=113.52  Aligned_cols=136  Identities=22%  Similarity=0.225  Sum_probs=100.6

Q ss_pred             eCCCeEEEEecCCccccCCccccc-ccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533        355 RWNDKIVISDIDGTITKSDVLGHV-LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  433 (567)
Q Consensus       355 ~~~~kiVIsDIDGTiTkSD~~G~~-~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l  433 (567)
                      ....+++++|+|||+......+++ +.....+-..+|+.+++++++++|++++++|+|+...+..|.+||..     .+.
T Consensus       155 ~~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~-----~~~  229 (300)
T PHA02530        155 PGLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQ-----TDI  229 (300)
T ss_pred             CCCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHH-----cCC
Confidence            344579999999999988766565 33344455788999999999999999999999999999999999977     332


Q ss_pred             CCCceecCCCchhhhhhhhhhccCh-hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        434 PEGPMLLNPTSLLNAFHTEVIEKKP-QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       434 P~GPvl~spd~l~~al~rEvi~k~p-~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      +--.+...+  ....++|+...++| -+.+..+|+.+..   .... -...+|++.+|+.+++++||++
T Consensus       230 ~f~~i~~~~--~~~~~~~~~~~~kp~p~~~~~~l~~~~~---~~~~-~~~~vgD~~~d~~~a~~~Gi~~  292 (300)
T PHA02530        230 WFDDLIGRP--PDMHFQREQGDKRPDDVVKEEIFWEKIA---PKYD-VLLAVDDRDQVVDMWRRIGLEC  292 (300)
T ss_pred             chhhhhCCc--chhhhcccCCCCCCcHHHHHHHHHHHhc---cCce-EEEEEcCcHHHHHHHHHhCCeE
Confidence            222333333  13346888777777 5677777776522   1112 3568999999999999999985

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=98.99  E-value=2.1e-09  Score=111.51  Aligned_cols=169  Identities=20%  Similarity=0.258  Sum_probs=123.1

Q ss_pred             hCcCCCCCceeEEEEEeccCCcc-ee-eeEEEEecCCCcEEEEecCCccccCCccccc----cccccc---cccchhHHH
Q psy12533         48 GLELRSGMNEVEFSVTTAYQGTT-RC-KCYLFKWRWNDKIVISDIDGTITKSDVLGHV----LPIMGK---DWAQNGVTR  118 (567)
Q Consensus        48 ~l~Lk~G~N~v~f~v~t~~qG~~-~~-~~~iylw~~~~kiVISDIDGTITkSD~lG~i----l~~lGk---Dwth~GVa~  118 (567)
                      -+.+..|-++|...+.    |.+ -+ .+.+-+.+...=-+|||||.||-.+++.+--    -..++.   -|+-+||-.
T Consensus       128 ~~~~~~g~~av~lq~e----g~~~~Ae~~~~~v~~~a~igiISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~  203 (373)
T COG4850         128 PFPPTKGNHAVRLQSE----GEKIKAEAAPVPVLNRAGIGIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSA  203 (373)
T ss_pred             ccCCCCCceeEEeecC----CCCcchhcccceeecccceeeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHH
Confidence            3455566656665555    432 22 2344445555557999999999999995431    233444   378889999


Q ss_pred             HHHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCc-hhhhhhhhhhccChhHHHHHHHHHHHH
Q psy12533        119 LFTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTS-LLNAFHTEVIEKKPQEFKISCLRDIMA  196 (567)
Q Consensus       119 Ly~~i~~nG-Y~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~-l~~al~REvi~k~p~~fKi~~L~~i~~  196 (567)
                      +|+.+.+-| ..|+|||..||+......+||..     ++||.||++|..-+ .+.-     +...-...|...|+.|..
T Consensus       204 ~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~-----~~~P~GPl~L~~~g~~~~~-----i~~sga~rK~~~l~nil~  273 (373)
T COG4850         204 WYRALTNLGDAPVFYVSNSPWQLFPTLQEFITN-----RNFPYGPLLLRRWGGVLDN-----IIESGAARKGQSLRNILR  273 (373)
T ss_pred             HHHHHHhcCCCCeEEecCChhHhHHHHHHHHhc-----CCCCCCchhHhhcCCcccc-----cccchhhhcccHHHHHHH
Confidence            999999998 99999999999999999999999     99999999988322 1111     222334568888887777


Q ss_pred             hCCCCCCCEEEecCCcccchhhhhhc-CCCCCCEEEE
Q psy12533        197 LFPPNTQPFYAGYGNKVNDVWSYQAV-GIPLSRIFTI  232 (567)
Q Consensus       197 lf~~~~~pf~agfGNr~tDv~aY~~v-GIp~~rIF~I  232 (567)
                      -||.  .-|+.-.+|...|.++|.++ ---++||.-|
T Consensus       274 ~~p~--~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I  308 (373)
T COG4850         274 RYPD--RKFVLVGDSGEHDPEIYAEMVRCFPNRILGI  308 (373)
T ss_pred             hCCC--ceEEEecCCCCcCHHHHHHHHHhCccceeeE
Confidence            7875  56899999999999999985 5556776444

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=98.79  E-value=2.7e-08  Score=91.64  Aligned_cols=102  Identities=19%  Similarity=0.259  Sum_probs=77.1

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchH------------HHHHHHHhc
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR------------VTREYLQSV  426 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~------------~Tr~~L~~~  426 (567)
                      |+|+|||||||...+ .|.+.    .+-.++.+.+..++++++|+.|+++|||+.....            .|.+||+. 
T Consensus         2 K~i~~DiDGTL~~~~-~~~y~----~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k-   75 (126)
T TIGR01689         2 KRLVMDLDNTITLTE-NGDYA----NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQ-   75 (126)
T ss_pred             CEEEEeCCCCcccCC-CCccc----ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHH-
Confidence            689999999998653 22221    1346789999999999999999999999998876            99999999 


Q ss_pred             ccCCccCCCCceecCC-----CchhhhhhhhhhccChhHHHHHHHHHHHhhCC
Q psy12533        427 KQEDLTLPEGPMLLNP-----TSLLNAFHTEVIEKKPQEFKISCLRDIMALFP  474 (567)
Q Consensus       427 ~Q~~~~lP~GPvl~sp-----d~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~  474 (567)
                          |++|--.|++-.     +++    .+.--.=+|++|..--.++|+.|..
T Consensus        76 ----~~ipYd~l~~~kp~~~~~~~----~~dD~~ir~~~~~~~~~~~~~~~~~  120 (126)
T TIGR01689        76 ----HNVPYDEIYVGKPWCGHDGF----YVDDRAIRPSEFSSLTYDEINTLTK  120 (126)
T ss_pred             ----cCCCCceEEeCCCcCCCCCc----eecchhhCHHHHHhcCHHHHHHHHh
Confidence                999976666654     233    2222223788888777888887764

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function

Probab=98.74  E-value=2.8e-08  Score=88.16  Aligned_cols=93  Identities=20%  Similarity=0.298  Sum_probs=75.3

Q ss_pred             eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEe
Q psy12533        129 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAG  208 (567)
Q Consensus       129 ~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~ag  208 (567)
                      +|+|||+.|+.+....++||..     +++|.||++|..-+..   .+.......+++|...|+.|...||.  ..|+.-
T Consensus         1 pf~YvS~SPwnly~~l~~Fl~~-----~~~P~G~~~Lr~~~~~---~~~~~~~~~~~~K~~~i~~i~~~fP~--~kfiLI   70 (100)
T PF09949_consen    1 PFFYVSNSPWNLYPFLRDFLRR-----NGFPAGPLLLRDYGPS---LSGLFKSGAEEHKRDNIERILRDFPE--RKFILI   70 (100)
T ss_pred             CEEEEcCCHHHHHHHHHHHHHh-----cCCCCCceEcccCCcc---ccccccCCchhHHHHHHHHHHHHCCC--CcEEEE
Confidence            5899999999999999999999     9999999999986332   12223333446999999999999995  789999


Q ss_pred             cCCcccchhhhhhc-CCCCCCEEE
Q psy12533        209 YGNKVNDVWSYQAV-GIPLSRIFT  231 (567)
Q Consensus       209 fGNr~tDv~aY~~v-GIp~~rIF~  231 (567)
                      .+|.+.|+++|.++ ---++||-.
T Consensus        71 GDsgq~DpeiY~~ia~~~P~~i~a   94 (100)
T PF09949_consen   71 GDSGQHDPEIYAEIARRFPGRILA   94 (100)
T ss_pred             eeCCCcCHHHHHHHHHHCCCCEEE
Confidence            99999999999985 444555543

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=98.72  E-value=5.7e-08  Score=89.46  Aligned_cols=105  Identities=19%  Similarity=0.258  Sum_probs=76.0

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchH------------HHHHHHHhc
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR------------VTREYLQSV  151 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~------------~Tr~~L~~~  151 (567)
                      |+|++||||||...+ .|.+.    .+-.++++.+..++++++|+.|+++|||+.....            .|.+||+. 
T Consensus         2 K~i~~DiDGTL~~~~-~~~y~----~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k-   75 (126)
T TIGR01689         2 KRLVMDLDNTITLTE-NGDYA----NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQ-   75 (126)
T ss_pred             CEEEEeCCCCcccCC-CCccc----ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHH-
Confidence            689999999998653 22221    1346778999999999999999999999998877            99999999 


Q ss_pred             ccCCccCCCCceecCCC-chhhhhhhhhhccChhHHHHHHHHHHHHhC
Q psy12533        152 KQEDLTLPEGPMLLNPT-SLLNAFHTEVIEKKPQEFKISCLRDIMALF  198 (567)
Q Consensus       152 ~q~~~~LP~GPlllsp~-~l~~al~REvi~k~p~~fKi~~L~~i~~lf  198 (567)
                          +++|--.|++... .....+.+.--.=+|++|..--.+.|+.+.
T Consensus        76 ----~~ipYd~l~~~kp~~~~~~~~~dD~~ir~~~~~~~~~~~~~~~~  119 (126)
T TIGR01689        76 ----HNVPYDEIYVGKPWCGHDGFYVDDRAIRPSEFSSLTYDEINTLT  119 (126)
T ss_pred             ----cCCCCceEEeCCCcCCCCCceecchhhCHHHHHhcCHHHHHHHH
Confidence                9999766666652 000112233233378888766677777764

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.71  E-value=8.2e-08  Score=83.14  Aligned_cols=127  Identities=21%  Similarity=0.195  Sum_probs=79.7

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC--CCCc
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL--PEGP  437 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l--P~GP  437 (567)
                      ++|||+||||+..+...+.   .......+|+.+++++++++|++++.+|+|+   ....+.++..     +++  +...
T Consensus         1 ~~vfD~D~tl~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~~~~-----~~~~~~~~~   69 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAE---IEELELYPGVKEALKELKEKGIKLALATNKS---RREVLELLEE-----LGLDDYFDP   69 (139)
T ss_pred             CeEEccCCceEccCccccc---cccCCcCcCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHHH-----cCCchhhhh
Confidence            4899999999998754333   2334578999999999999999999999999   4455777766     333  3333


Q ss_pred             eecCCCchhh-------hhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        438 MLLNPTSLLN-------AFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       438 vl~spd~l~~-------al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      ++.+.+....       ....+++..+|...+...+.+...   ..... ...+|++.+|+.+.+.+|++.
T Consensus        70 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~igD~~~d~~~~~~~g~~~  136 (139)
T cd01427          70 VITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLG---VDPEE-VLMVGDSLNDIEMAKAAGGLG  136 (139)
T ss_pred             eeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcC---CChhh-EEEeCCCHHHHHHHHHcCCce
Confidence            3332222110       001122222553333333222222   22223 568999999999999998763

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01675 plant-AP plant acid phosphatase

Probab=98.66  E-value=2.3e-07  Score=93.40  Aligned_cols=127  Identities=22%  Similarity=0.248  Sum_probs=93.7

Q ss_pred             CCCeEEEEecCCccccCCc------cc-ccc--------cccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533        356 WNDKIVISDIDGTITKSDV------LG-HVL--------PIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR  420 (567)
Q Consensus       356 ~~~kiVIsDIDGTiTkSD~------~G-~~~--------~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr  420 (567)
                      .+..+||+|||-|+-.+--      .| .-+        -.-|+-.+-||+.+++++++++|++|+|||+|+..+.+.|.
T Consensus        75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~  154 (229)
T TIGR01675        75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL  154 (229)
T ss_pred             CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence            4557899999999886531      11 111        12455667889999999999999999999999999999999


Q ss_pred             HHHHhcccCCccCCC-CceecCCCchhhhhhhhhh--ccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc
Q psy12533        421 EYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVI--EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV  497 (567)
Q Consensus       421 ~~L~~~~Q~~~~lP~-GPvl~spd~l~~al~rEvi--~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v  497 (567)
                      ++|..     .++|. .-|++          |..-  .+..-+||.+..+.+..    .+--+.+-+|+.-+|.     .
T Consensus       155 ~nL~~-----~G~~~~~~LiL----------R~~~d~~~~~~~yKs~~R~~l~~----~GYrIv~~iGDq~sDl-----~  210 (229)
T TIGR01675       155 DNLIN-----AGFTGWKHLIL----------RGLEDSNKTVVTYKSEVRKSLME----EGYRIWGNIGDQWSDL-----L  210 (229)
T ss_pred             HHHHH-----cCCCCcCeeee----------cCCCCCCchHhHHHHHHHHHHHh----CCceEEEEECCChHHh-----c
Confidence            99998     78883 23333          3221  22336789999888887    3445689999999998     3


Q ss_pred             CCCCC-CEEE
Q psy12533        498 GIPLS-RIFT  506 (567)
Q Consensus       498 GIp~~-rIF~  506 (567)
                      |-+.+ |+|-
T Consensus       211 G~~~~~RtFK  220 (229)
T TIGR01675       211 GSPPGRRTFK  220 (229)
T ss_pred             CCCccCceee
Confidence            55665 8875

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.65  E-value=1.3e-07  Score=81.86  Aligned_cols=126  Identities=22%  Similarity=0.215  Sum_probs=79.4

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC--CCCc
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL--PEGP  162 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L--P~GP  162 (567)
                      ++|||+||||++.+...+.   .......+|+.++.+.++++|++++.+|+|+   ....+.++..     .++  +...
T Consensus         1 ~~vfD~D~tl~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~~~~-----~~~~~~~~~   69 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAE---IEELELYPGVKEALKELKEKGIKLALATNKS---RREVLELLEE-----LGLDDYFDP   69 (139)
T ss_pred             CeEEccCCceEccCccccc---cccCCcCcCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHHH-----cCCchhhhh
Confidence            4899999999998764443   2344678899999999999999999999998   4555777766     333  3333


Q ss_pred             eecCCCchhh-------hhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        163 MLLNPTSLLN-------AFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       163 lllsp~~l~~-------al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      ++.+.+....       ....+++..+|...+...   +...+...... ...+|++.+|+.+.+.+|++
T Consensus        70 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~igD~~~d~~~~~~~g~~  135 (139)
T cd01427          70 VITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLA---ALKLLGVDPEE-VLMVGDSLNDIEMAKAAGGL  135 (139)
T ss_pred             eeccchhhhhcccccccccccccccCCCCHHHHHH---HHHHcCCChhh-EEEeCCCHHHHHHHHHcCCc
Confidence            3333222110       000112222454333333   22222221222 67899999999999999876

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=98.64  E-value=1.4e-07  Score=96.89  Aligned_cols=128  Identities=20%  Similarity=0.271  Sum_probs=90.5

Q ss_pred             CCeEEEEecCCccccC-Cccc-cc--------------ccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533        357 NDKIVISDIDGTITKS-DVLG-HV--------------LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR  420 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkS-D~~G-~~--------------~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr  420 (567)
                      +.-+||+|||+|+..+ .-.+ |.              +-..|+..+-||+.+||+.++++|++|+|||+|+..+.+.|.
T Consensus       100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~  179 (275)
T TIGR01680       100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE  179 (275)
T ss_pred             CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence            4568999999998832 1111 11              112334456789999999999999999999999999999999


Q ss_pred             HHHHhcccCCccCCCCceecCCCchhhhhhhhhhc---cChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc
Q psy12533        421 EYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIE---KKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV  497 (567)
Q Consensus       421 ~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~---k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v  497 (567)
                      +||..     .++|.      .+.|+   +|..-+   +..-.+|.+..+.+..    ++--+.+.+|+.-+|.     .
T Consensus       180 ~NL~k-----aGy~~------~~~Li---LR~~~D~~~~~av~yKs~~R~~li~----eGYrIv~~iGDq~sDl-----~  236 (275)
T TIGR01680       180 ANLKK-----AGYHT------WEKLI---LKDPQDNSAENAVEYKTAARAKLIQ----EGYNIVGIIGDQWNDL-----K  236 (275)
T ss_pred             HHHHH-----cCCCC------cceee---ecCCCCCccchhHHHHHHHHHHHHH----cCceEEEEECCCHHhc-----c
Confidence            99988     78873      23332   332221   1225789898888776    3445689999999998     4


Q ss_pred             CCCC--CCEEEE
Q psy12533        498 GIPL--SRIFTI  507 (567)
Q Consensus       498 GIp~--~rIF~I  507 (567)
                      |-+.  .|.|-.
T Consensus       237 G~~~g~~RtFKL  248 (275)
T TIGR01680       237 GEHRGAIRSFKL  248 (275)
T ss_pred             CCCccCcceecC
Confidence            6654  577753

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR01675 plant-AP plant acid phosphatase

Probab=98.56  E-value=4.3e-07  Score=91.49  Aligned_cols=127  Identities=22%  Similarity=0.219  Sum_probs=90.8

Q ss_pred             CcEEEEecCCccccCCc--ccccc-------------ccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHH
Q psy12533         83 DKIVISDIDGTITKSDV--LGHVL-------------PIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREY  147 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~--lG~il-------------~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~  147 (567)
                      ..+||+|||.|+..+--  ..|..             -.-|+.-+-+|+.+||++++++|++|+|||+|+..+.+.|.++
T Consensus        77 ~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~n  156 (229)
T TIGR01675        77 MDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDN  156 (229)
T ss_pred             CcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH
Confidence            34999999999886542  11111             1244555667999999999999999999999999999999999


Q ss_pred             HHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        148 LQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       148 L~~~~q~~~~LP~-GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      |..     .++|. .-|+|.+..        --.+..-.||.+..+.+..-    +--+++-+|+..+|..     |-+.
T Consensus       157 L~~-----~G~~~~~~LiLR~~~--------d~~~~~~~yKs~~R~~l~~~----GYrIv~~iGDq~sDl~-----G~~~  214 (229)
T TIGR01675       157 LIN-----AGFTGWKHLILRGLE--------DSNKTVVTYKSEVRKSLMEE----GYRIWGNIGDQWSDLL-----GSPP  214 (229)
T ss_pred             HHH-----cCCCCcCeeeecCCC--------CCCchHhHHHHHHHHHHHhC----CceEEEEECCChHHhc-----CCCc
Confidence            999     78884 344544310        01222334899998887763    4456899999999983     4555


Q ss_pred             C-CEEE
Q psy12533        227 S-RIFT  231 (567)
Q Consensus       227 ~-rIF~  231 (567)
                      + |+|-
T Consensus       215 ~~RtFK  220 (229)
T TIGR01675       215 GRRTFK  220 (229)
T ss_pred             cCceee
Confidence            4 8875

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=98.53  E-value=4.2e-08  Score=98.36  Aligned_cols=135  Identities=21%  Similarity=0.305  Sum_probs=91.6

Q ss_pred             CCCeEEEEecCCccccC-Cccc-c------c-------ccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533        356 WNDKIVISDIDGTITKS-DVLG-H------V-------LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR  420 (567)
Q Consensus       356 ~~~kiVIsDIDGTiTkS-D~~G-~------~-------~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr  420 (567)
                      ....+||||||+|+..+ ...+ +      +       +-.-|++.+-||+.+||+..+++|.+|+|+|+|+..+.+.|.
T Consensus        70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~  149 (229)
T PF03767_consen   70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATE  149 (229)
T ss_dssp             TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHH
T ss_pred             CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Confidence            56778999999998732 1101 0      0       111355567789999999999999999999999999999999


Q ss_pred             HHHHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        421 EYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       421 ~~L~~~~Q~~~~lP~-GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                      ++|..     .+++. -.+++.++.-.       -.+..-.+|.+..+.|..    .+.-+.+-+|+..+|+...+..|-
T Consensus       150 ~nL~~-----~G~~~~~~l~lr~~~~~-------~~~~~~~yK~~~r~~i~~----~Gy~Ii~~iGD~~~D~~~~~~~~~  213 (229)
T PF03767_consen  150 KNLKK-----AGFPGWDHLILRPDKDP-------SKKSAVEYKSERRKEIEK----KGYRIIANIGDQLSDFSGAKTAGA  213 (229)
T ss_dssp             HHHHH-----HTTSTBSCGEEEEESST-------SS------SHHHHHHHHH----TTEEEEEEEESSGGGCHCTHHHHH
T ss_pred             HHHHH-----cCCCccchhcccccccc-------ccccccccchHHHHHHHH----cCCcEEEEeCCCHHHhhccccccc
Confidence            99988     66664 33333332110       011225789999999988    344568899999999998444444


Q ss_pred             CCCCEEE
Q psy12533        500 PLSRIFT  506 (567)
Q Consensus       500 p~~rIF~  506 (567)
                      ...|.|.
T Consensus       214 ~~~r~f~  220 (229)
T PF03767_consen  214 RAERWFK  220 (229)
T ss_dssp             HHTTEEE
T ss_pred             ccceEEE
Confidence            3366654

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=98.53  E-value=5.1e-07  Score=92.89  Aligned_cols=130  Identities=19%  Similarity=0.240  Sum_probs=88.0

Q ss_pred             CCcEEEEecCCccccCC-cc-cccc--------------ccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533         82 NDKIVISDIDGTITKSD-VL-GHVL--------------PIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR  145 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD-~l-G~il--------------~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr  145 (567)
                      +..+||+|||+|+..+- -. .|..              -..|+.-+-+|+.+||+.++++|++|+|||+|+..+.+.|.
T Consensus       100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~  179 (275)
T TIGR01680       100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE  179 (275)
T ss_pred             CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence            44599999999998321 11 1111              11223334679999999999999999999999999999999


Q ss_pred             HHHHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533        146 EYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  224 (567)
Q Consensus       146 ~~L~~~~q~~~~LP~-GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  224 (567)
                      ++|..     .++|. --|+|.+.+-.       ..+..-.+|.+..+.+..-    +--+.+.+|+.-+|.     .|-
T Consensus       180 ~NL~k-----aGy~~~~~LiLR~~~D~-------~~~~av~yKs~~R~~li~e----GYrIv~~iGDq~sDl-----~G~  238 (275)
T TIGR01680       180 ANLKK-----AGYHTWEKLILKDPQDN-------SAENAVEYKTAARAKLIQE----GYNIVGIIGDQWNDL-----KGE  238 (275)
T ss_pred             HHHHH-----cCCCCcceeeecCCCCC-------ccchhHHHHHHHHHHHHHc----CceEEEEECCCHHhc-----cCC
Confidence            99998     78873 22444432110       0112224898887776653    345689999999998     355


Q ss_pred             CC--CCEEEE
Q psy12533        225 PL--SRIFTI  232 (567)
Q Consensus       225 p~--~rIF~I  232 (567)
                      +.  .|.|-.
T Consensus       239 ~~g~~RtFKL  248 (275)
T TIGR01680       239 HRGAIRSFKL  248 (275)
T ss_pred             CccCcceecC
Confidence            43  477643

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=98.38  E-value=1.5e-07  Score=94.32  Aligned_cols=135  Identities=21%  Similarity=0.307  Sum_probs=90.8

Q ss_pred             CCCcEEEEecCCccccCCcc-c-cc-------------cccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533         81 WNDKIVISDIDGTITKSDVL-G-HV-------------LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR  145 (567)
Q Consensus        81 ~~~kiVISDIDGTITkSD~l-G-~i-------------l~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr  145 (567)
                      ....+||+|||+|+..+-.. + +.             +-.-|++.+-||+.+||+.++++|.+|+|+|+|+..+.+.|.
T Consensus        70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~  149 (229)
T PF03767_consen   70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATE  149 (229)
T ss_dssp             TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHH
T ss_pred             CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Confidence            34458999999998733111 1 11             011344556679999999999999999999999999999999


Q ss_pred             HHHHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533        146 EYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  224 (567)
Q Consensus       146 ~~L~~~~q~~~~LP~-GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  224 (567)
                      ..|..     .+++. -.+++.++.-.       -.+..-.+|.+..+.|...    +.-+++-+|+..+|....+..|-
T Consensus       150 ~nL~~-----~G~~~~~~l~lr~~~~~-------~~~~~~~yK~~~r~~i~~~----Gy~Ii~~iGD~~~D~~~~~~~~~  213 (229)
T PF03767_consen  150 KNLKK-----AGFPGWDHLILRPDKDP-------SKKSAVEYKSERRKEIEKK----GYRIIANIGDQLSDFSGAKTAGA  213 (229)
T ss_dssp             HHHHH-----HTTSTBSCGEEEEESST-------SS------SHHHHHHHHHT----TEEEEEEEESSGGGCHCTHHHHH
T ss_pred             HHHHH-----cCCCccchhcccccccc-------ccccccccchHHHHHHHHc----CCcEEEEeCCCHHHhhccccccc
Confidence            99998     66765 34444443210       0112234899998888875    34568899999999998544444


Q ss_pred             CCCCEEE
Q psy12533        225 PLSRIFT  231 (567)
Q Consensus       225 p~~rIF~  231 (567)
                      ...|.|.
T Consensus       214 ~~~r~f~  220 (229)
T PF03767_consen  214 RAERWFK  220 (229)
T ss_dssp             HHTTEEE
T ss_pred             ccceEEE
Confidence            3356554

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.34  E-value=2.3e-06  Score=86.63  Aligned_cols=122  Identities=19%  Similarity=0.266  Sum_probs=80.0

Q ss_pred             EEEEecCCccccCCc---cc-ccccc-----------------cCcCC--cchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533        360 IVISDIDGTITKSDV---LG-HVLPI-----------------MGKDW--AQNGVTRLFTKIKENGYKLLYLSARAIGQS  416 (567)
Q Consensus       360 iVIsDIDGTiTkSD~---~G-~~~~~-----------------~GkDw--~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa  416 (567)
                      .|++|||||++-|--   .| +.+..                 .....  ..+|+.+++++++++|++|.|+|+|+....
T Consensus        65 av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~  144 (237)
T PRK11009         65 AVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKT  144 (237)
T ss_pred             EEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence            899999999997522   21 11100                 01122  344699999999999999999999997777


Q ss_pred             HHHHHHHHhcccCCccCCCC---ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHh
Q psy12533        417 RVTREYLQSVKQEDLTLPEG---PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS  493 (567)
Q Consensus       417 ~~Tr~~L~~~~Q~~~~lP~G---Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~a  493 (567)
                      +.|.++|..    .+++|.-   ++++..+.         . .+|.  |..++++.       ..  ..-+|++.+|+.+
T Consensus       145 ~~t~~~Llk----~~gip~~~~f~vil~gd~---------~-~K~~--K~~~l~~~-------~i--~I~IGDs~~Di~a  199 (237)
T PRK11009        145 ETVSKTLAD----DFHIPADNMNPVIFAGDK---------P-GQYT--KTQWLKKK-------NI--RIFYGDSDNDITA  199 (237)
T ss_pred             HHHHHHHHH----HcCCCcccceeEEEcCCC---------C-CCCC--HHHHHHhc-------CC--eEEEcCCHHHHHH
Confidence            777777664    2678743   33332221         1 1232  33444421       22  2349999999999


Q ss_pred             HHHcCCCCCCEEE
Q psy12533        494 YQAVGIPLSRIFT  506 (567)
Q Consensus       494 Y~~vGIp~~rIF~  506 (567)
                      -+++|+..-+++-
T Consensus       200 A~~AGi~~I~v~~  212 (237)
T PRK11009        200 AREAGARGIRILR  212 (237)
T ss_pred             HHHcCCcEEEEec
Confidence            9999999877744

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=98.30  E-value=4.5e-06  Score=87.23  Aligned_cols=164  Identities=19%  Similarity=0.255  Sum_probs=115.3

Q ss_pred             CcCCCCCceeEEEEEecccCee-ee-eeeEEeeeCCCeEEEEecCCccccCCccccc----ccccC---cCCcchhHHHH
Q psy12533        324 LELRSGMNEVEFSVTTAYQGTT-RC-KCYLFKWRWNDKIVISDIDGTITKSDVLGHV----LPIMG---KDWAQNGVTRL  394 (567)
Q Consensus       324 l~L~~G~n~V~f~v~s~~~g~~-~~-~~~iylw~~~~kiVIsDIDGTiTkSD~~G~~----~~~~G---kDw~h~Gva~l  394 (567)
                      +.+..|-++|+.-+.    |.+ -+ .+.+-+.+...=-+|||||-||-.+++.+--    -+.++   ..|+-|||-.+
T Consensus       129 ~~~~~g~~av~lq~e----g~~~~Ae~~~~~v~~~a~igiISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~  204 (373)
T COG4850         129 FPPTKGNHAVRLQSE----GEKIKAEAAPVPVLNRAGIGIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAW  204 (373)
T ss_pred             cCCCCCceeEEeecC----CCCcchhcccceeecccceeeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHH
Confidence            344456666666554    432 12 2334445555556999999999999986532    12222   34788999999


Q ss_pred             HHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC-----CCchhhhhhhhhhccChhHHHHHHHHH
Q psy12533        395 FTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN-----PTSLLNAFHTEVIEKKPQEFKISCLRD  468 (567)
Q Consensus       395 ~~~i~~nG-Y~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~s-----pd~l~~al~rEvi~k~p~~fK~~~L~~  468 (567)
                      |+.+.+.| -.|.|||.-|+..-....+||..     ++||.||+++.     ++.++         ..-..-|...|+.
T Consensus       205 yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~-----~~~P~GPl~L~~~g~~~~~i~---------~sga~rK~~~l~n  270 (373)
T COG4850         205 YRALTNLGDAPVFYVSNSPWQLFPTLQEFITN-----RNFPYGPLLLRRWGGVLDNII---------ESGAARKGQSLRN  270 (373)
T ss_pred             HHHHHhcCCCCeEEecCChhHhHHHHHHHHhc-----CCCCCCchhHhhcCCcccccc---------cchhhhcccHHHH
Confidence            99999999 99999999999999999999999     99999999987     33332         1234558888886


Q ss_pred             HHhhCCCCCCCEEEecCCCcccHHhHHHc-CCCCCCEEEE
Q psy12533        469 IMALFPPNTQPFYAGYGNKVNDVWSYQAV-GIPLSRIFTI  507 (567)
Q Consensus       469 i~~lf~~~~~pf~agfGNr~tDv~aY~~v-GIp~~rIF~I  507 (567)
                      |..-||......+  =+|-..|...|..+ ---++||.-|
T Consensus       271 il~~~p~~kfvLV--GDsGE~DpeIYae~v~~fP~RIl~I  308 (373)
T COG4850         271 ILRRYPDRKFVLV--GDSGEHDPEIYAEMVRCFPNRILGI  308 (373)
T ss_pred             HHHhCCCceEEEe--cCCCCcCHHHHHHHHHhCccceeeE
Confidence            6666776444433  34446799999985 5556666443

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.22  E-value=4.6e-06  Score=84.43  Aligned_cols=122  Identities=19%  Similarity=0.259  Sum_probs=79.6

Q ss_pred             EEEEecCCccccCCc---cc-ccccc-----------------ccccccc--hhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533         85 IVISDIDGTITKSDV---LG-HVLPI-----------------MGKDWAQ--NGVTRLFTKIKENGYKLLYLSARAIGQS  141 (567)
Q Consensus        85 iVISDIDGTITkSD~---lG-~il~~-----------------lGkDwth--~GVa~Ly~~i~~nGY~ilYLSaRpi~~a  141 (567)
                      .|++|||||++-|--   .| +.+..                 ...+.+.  +|+.++++.++++|++|.|+|+|+....
T Consensus        65 av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~  144 (237)
T PRK11009         65 AVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKT  144 (237)
T ss_pred             EEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence            899999999997522   22 11100                 0112233  3699999999999999999999987777


Q ss_pred             HHHHHHHHhcccCCccCCCC---ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhh
Q psy12533        142 RVTREYLQSVKQEDLTLPEG---PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS  218 (567)
Q Consensus       142 ~~Tr~~L~~~~q~~~~LP~G---Plllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~a  218 (567)
                      +.|..+|..    .+++|.-   ++++..+.         . .+++  |..++++   .    ..  ..-+|+..+|+.+
T Consensus       145 ~~t~~~Llk----~~gip~~~~f~vil~gd~---------~-~K~~--K~~~l~~---~----~i--~I~IGDs~~Di~a  199 (237)
T PRK11009        145 ETVSKTLAD----DFHIPADNMNPVIFAGDK---------P-GQYT--KTQWLKK---K----NI--RIFYGDSDNDITA  199 (237)
T ss_pred             HHHHHHHHH----HcCCCcccceeEEEcCCC---------C-CCCC--HHHHHHh---c----CC--eEEEcCCHHHHHH
Confidence            777777654    2678743   23332221         1 1222  4444442   2    22  3449999999999


Q ss_pred             hhhcCCCCCCEEE
Q psy12533        219 YQAVGIPLSRIFT  231 (567)
Q Consensus       219 Y~~vGIp~~rIF~  231 (567)
                      -+++|+..-+++-
T Consensus       200 A~~AGi~~I~v~~  212 (237)
T PRK11009        200 AREAGARGIRILR  212 (237)
T ss_pred             HHHcCCcEEEEec
Confidence            9999999876643

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.21  E-value=5.4e-06  Score=85.31  Aligned_cols=116  Identities=19%  Similarity=0.295  Sum_probs=80.5

Q ss_pred             CCCeEEEEecCCccccCCc-ccc-cccc---cCcCC----------cchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533        356 WNDKIVISDIDGTITKSDV-LGH-VLPI---MGKDW----------AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR  420 (567)
Q Consensus       356 ~~~kiVIsDIDGTiTkSD~-~G~-~~~~---~GkDw----------~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr  420 (567)
                      ....+||+|||+|+..+.- .|+ +...   =.++|          .-||+.++++.++++|+++.|+|+|+..+.+.|.
T Consensus        73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~  152 (266)
T TIGR01533        73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATL  152 (266)
T ss_pred             CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHH
Confidence            3466899999999986652 111 1110   01233          4589999999999999999999999999999999


Q ss_pred             HHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHH
Q psy12533        421 EYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQA  496 (567)
Q Consensus       421 ~~L~~~~Q~~~~lP~---GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~  496 (567)
                      .+|..     +++|.   -+|++..++          .     .|-...+.|..    .++ +++-+|++..|+.....
T Consensus       153 ~~Lkk-----~Gi~~~~~d~lllr~~~----------~-----~K~~rr~~I~~----~y~-Ivl~vGD~~~Df~~~~~  206 (266)
T TIGR01533       153 KNLKR-----FGFPQADEEHLLLKKDK----------S-----SKESRRQKVQK----DYE-IVLLFGDNLLDFDDFFY  206 (266)
T ss_pred             HHHHH-----cCcCCCCcceEEeCCCC----------C-----CcHHHHHHHHh----cCC-EEEEECCCHHHhhhhhc
Confidence            99988     78874   244443321          1     24444445554    344 47899999999976443

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.18  E-value=5.5e-06  Score=85.24  Aligned_cols=115  Identities=20%  Similarity=0.324  Sum_probs=80.4

Q ss_pred             CCcEEEEecCCccccCCc-ccc-cc---ccccccc----------cchhHHHHHHHHHHCCceEEEEccCcccchHHHHH
Q psy12533         82 NDKIVISDIDGTITKSDV-LGH-VL---PIMGKDW----------AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTRE  146 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~-lG~-il---~~lGkDw----------th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~  146 (567)
                      ...+||+|||+|+..+.. .|+ +.   +.=.++|          .-+|+.++++.++++|++++|+|+|+..+.+.|..
T Consensus        74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~  153 (266)
T TIGR01533        74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLK  153 (266)
T ss_pred             CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHH
Confidence            445999999999986652 111 11   1111234          44799999999999999999999999999999999


Q ss_pred             HHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhh
Q psy12533        147 YLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQA  221 (567)
Q Consensus       147 ~L~~~~q~~~~LP~---GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~  221 (567)
                      +|+.     +++|.   -+|++.+++               ..|-.....|..-    + -+++-+|++..|......
T Consensus       154 ~Lkk-----~Gi~~~~~d~lllr~~~---------------~~K~~rr~~I~~~----y-~Ivl~vGD~~~Df~~~~~  206 (266)
T TIGR01533       154 NLKR-----FGFPQADEEHLLLKKDK---------------SSKESRRQKVQKD----Y-EIVLLFGDNLLDFDDFFY  206 (266)
T ss_pred             HHHH-----cCcCCCCcceEEeCCCC---------------CCcHHHHHHHHhc----C-CEEEEECCCHHHhhhhhc
Confidence            9988     78874   355554421               1244445555542    3 348899999999976433

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.18  E-value=1.2e-05  Score=72.54  Aligned_cols=121  Identities=20%  Similarity=0.274  Sum_probs=73.7

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccc-----hHHHHHHHHhcccCCccC
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ-----SRVTREYLQSVKQEDLTL  433 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~q-----a~~Tr~~L~~~~Q~~~~l  433 (567)
                      |+|+||+||||+.+   ++.....+.-...+||.+++..++++||++..+|.++...     .+.++..|+.     .++
T Consensus         1 k~~~~D~dgtL~~~---~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-----~~l   72 (132)
T TIGR01662         1 KGVVLDLDGTLTDD---VPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-----LGV   72 (132)
T ss_pred             CEEEEeCCCceecC---CCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-----CCC
Confidence            68999999999943   2222222222357999999999999999999999997443     3445666666     455


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCC-CcccHHhHHHcCCCC
Q psy12533        434 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGN-KVNDVWSYQAVGIPL  501 (567)
Q Consensus       434 P~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGN-r~tDv~aY~~vGIp~  501 (567)
                      +.=.+.      +..   ....++|+.|+..+ +.+.. +++ ...  .-+|+ ..+|+.+=+++|+..
T Consensus        73 ~~~~~~------~~~---~~~KP~~~~~~~~~-~~~~~-~~~-~~~--v~IGD~~~~Di~~A~~~Gi~~  127 (132)
T TIGR01662        73 PIDVLY------ACP---HCRKPKPGMFLEAL-KRFNE-IDP-EES--VYVGDQDLTDLQAAKRAGLAF  127 (132)
T ss_pred             CEEEEE------ECC---CCCCCChHHHHHHH-HHcCC-CCh-hhe--EEEcCCCcccHHHHHHCCCeE
Confidence            410011      111   11233445554332 22210 111 222  35788 589999999999863

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.13  E-value=1.2e-05  Score=72.47  Aligned_cols=120  Identities=21%  Similarity=0.284  Sum_probs=72.7

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccc-----hHHHHHHHHhcccCCccC
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ-----SRVTREYLQSVKQEDLTL  158 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~-----a~~Tr~~L~~~~q~~~~L  158 (567)
                      |+|+||+||||+.+   ++.....+.-...+||.++...++++||++..+|.++...     .+.++..|+.     .++
T Consensus         1 k~~~~D~dgtL~~~---~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-----~~l   72 (132)
T TIGR01662         1 KGVVLDLDGTLTDD---VPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-----LGV   72 (132)
T ss_pred             CEEEEeCCCceecC---CCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-----CCC
Confidence            68999999999943   2222222223456899999999999999999999987443     3445556665     445


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCC-CCCCCEEEecCC-cccchhhhhhcCCCC
Q psy12533        159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFP-PNTQPFYAGYGN-KVNDVWSYQAVGIPL  226 (567)
Q Consensus       159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~-~~~~pf~agfGN-r~tDv~aY~~vGIp~  226 (567)
                      +.       +..+.+ . ....++|+.|     ..+.+.++ -...- ..-+|+ ..+|+.+=+++|+..
T Consensus        73 ~~-------~~~~~~-~-~~~KP~~~~~-----~~~~~~~~~~~~~~-~v~IGD~~~~Di~~A~~~Gi~~  127 (132)
T TIGR01662        73 PI-------DVLYAC-P-HCRKPKPGMF-----LEALKRFNEIDPEE-SVYVGDQDLTDLQAAKRAGLAF  127 (132)
T ss_pred             CE-------EEEEEC-C-CCCCCChHHH-----HHHHHHcCCCChhh-eEEEcCCCcccHHHHHHCCCeE
Confidence            41       011100 0 1123333434     33333331 11111 334778 589999999999864

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.10  E-value=1.4e-05  Score=80.94  Aligned_cols=121  Identities=19%  Similarity=0.331  Sum_probs=77.4

Q ss_pred             EEEEecCCccccCCc---cccc-cc------ccCcC-C----------cchh--HHHHHHHHHHCCceEEEEccCcccch
Q psy12533        360 IVISDIDGTITKSDV---LGHV-LP------IMGKD-W----------AQNG--VTRLFTKIKENGYKLLYLSARAIGQS  416 (567)
Q Consensus       360 iVIsDIDGTiTkSD~---~G~~-~~------~~GkD-w----------~h~G--va~l~~~i~~nGY~iiYLSaRpi~qa  416 (567)
                      .|+||||||+.-|..   .|.- .+      ..|.+ |          +.++  +.+++..++++|+++.|+|+|.....
T Consensus        65 aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~  144 (237)
T TIGR01672        65 AVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKT  144 (237)
T ss_pred             EEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcC
Confidence            799999999999977   5532 11      12222 2          2344  99999999999999999999965422


Q ss_pred             -HHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhH
Q psy12533        417 -RVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSY  494 (567)
Q Consensus       417 -~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY  494 (567)
                       ..++..++.     .++|.- ++++..+..        ...+|+.  ..++++       ...  ..-||++.+|+.+-
T Consensus       145 ~~~a~~ll~~-----lGi~~~f~~i~~~d~~--------~~~Kp~~--~~~l~~-------~~i--~i~vGDs~~DI~aA  200 (237)
T TIGR01672       145 DTVSKTLAKN-----FHIPAMNPVIFAGDKP--------GQYQYTK--TQWIQD-------KNI--RIHYGDSDNDITAA  200 (237)
T ss_pred             HHHHHHHHHH-----hCCchheeEEECCCCC--------CCCCCCH--HHHHHh-------CCC--eEEEeCCHHHHHHH
Confidence             344444444     566641 233322211        1234553  334432       122  34699999999999


Q ss_pred             HHcCCCCCCE
Q psy12533        495 QAVGIPLSRI  504 (567)
Q Consensus       495 ~~vGIp~~rI  504 (567)
                      +++|+..-++
T Consensus       201 k~AGi~~I~V  210 (237)
T TIGR01672       201 KEAGARGIRI  210 (237)
T ss_pred             HHCCCCEEEE
Confidence            9999987665

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=97.96  E-value=4.2e-05  Score=77.48  Aligned_cols=121  Identities=20%  Similarity=0.326  Sum_probs=77.1

Q ss_pred             EEEEecCCccccCCc---cccc-cc------ccccc-c----------cchh--HHHHHHHHHHCCceEEEEccCcccc-
Q psy12533         85 IVISDIDGTITKSDV---LGHV-LP------IMGKD-W----------AQNG--VTRLFTKIKENGYKLLYLSARAIGQ-  140 (567)
Q Consensus        85 iVISDIDGTITkSD~---lG~i-l~------~lGkD-w----------th~G--Va~Ly~~i~~nGY~ilYLSaRpi~~-  140 (567)
                      .|+||||||++.|..   .|.- .+      ..|.. |          +.++  +.++...++++|+++.|+|+|.... 
T Consensus        65 aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~  144 (237)
T TIGR01672        65 AVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKT  144 (237)
T ss_pred             EEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcC
Confidence            899999999999987   5532 11      12222 2          2334  9999999999999999999996542 


Q ss_pred             hHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhh
Q psy12533        141 SRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSY  219 (567)
Q Consensus       141 a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY  219 (567)
                      ...++..++.     .++|.= ++++..+..        ...+|+  |..++++   .    ..  ..-||++..|+.+-
T Consensus       145 ~~~a~~ll~~-----lGi~~~f~~i~~~d~~--------~~~Kp~--~~~~l~~---~----~i--~i~vGDs~~DI~aA  200 (237)
T TIGR01672       145 DTVSKTLAKN-----FHIPAMNPVIFAGDKP--------GQYQYT--KTQWIQD---K----NI--RIHYGDSDNDITAA  200 (237)
T ss_pred             HHHHHHHHHH-----hCCchheeEEECCCCC--------CCCCCC--HHHHHHh---C----CC--eEEEeCCHHHHHHH
Confidence            2344445545     566531 233222211        123454  3334332   1    22  45699999999999


Q ss_pred             hhcCCCCCCE
Q psy12533        220 QAVGIPLSRI  229 (567)
Q Consensus       220 ~~vGIp~~rI  229 (567)
                      +++|+..-++
T Consensus       201 k~AGi~~I~V  210 (237)
T TIGR01672       201 KEAGARGIRI  210 (237)
T ss_pred             HHCCCCEEEE
Confidence            9999986655

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function

Probab=97.80  E-value=7.2e-05  Score=66.51  Aligned_cols=94  Identities=20%  Similarity=0.308  Sum_probs=68.9

Q ss_pred             eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEe
Q psy12533        404 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAG  483 (567)
Q Consensus       404 ~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~ag  483 (567)
                      .|.|||+.|.......++||..     +++|.||+++..-+..   .+..+....++.|...|+.|...||...-.++. 
T Consensus         1 pf~YvS~SPwnly~~l~~Fl~~-----~~~P~G~~~Lr~~~~~---~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIG-   71 (100)
T PF09949_consen    1 PFFYVSNSPWNLYPFLRDFLRR-----NGFPAGPLLLRDYGPS---LSGLFKSGAEEHKRDNIERILRDFPERKFILIG-   71 (100)
T ss_pred             CEEEEcCCHHHHHHHHHHHHHh-----cCCCCCceEcccCCcc---ccccccCCchhHHHHHHHHHHHHCCCCcEEEEe-
Confidence            4799999999999999999999     9999999999775221   112222233469999999999999975544432 


Q ss_pred             cCCCcccHHhHHHc-CCCCCCEEEE
Q psy12533        484 YGNKVNDVWSYQAV-GIPLSRIFTI  507 (567)
Q Consensus       484 fGNr~tDv~aY~~v-GIp~~rIF~I  507 (567)
                       +|-..|..+|.++ -=-++||-.|
T Consensus        72 -Dsgq~DpeiY~~ia~~~P~~i~ai   95 (100)
T PF09949_consen   72 -DSGQHDPEIYAEIARRFPGRILAI   95 (100)
T ss_pred             -eCCCcCHHHHHHHHHHCCCCEEEE
Confidence             3446799999985 4445666443

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=97.76  E-value=0.00016  Score=67.02  Aligned_cols=127  Identities=17%  Similarity=0.234  Sum_probs=73.8

Q ss_pred             eEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCccc------ch------HHHHHHHHh
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIG------QS------RVTREYLQS  425 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~------qa------~~Tr~~L~~  425 (567)
                      ++++||+||||+.-.... +. ....+| ..+|+.+++..++++||++.-+|+.+..      ++      ..++..|+.
T Consensus         1 ~~~~~d~dgtl~~~~~~~-~~-~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSD-YP-RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ   78 (147)
T ss_pred             CeEEEeCCCceeccCCcc-cC-CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh
Confidence            579999999999764322 21 122344 5889999999999999999999997632      11      344555555


Q ss_pred             cccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        426 VKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       426 ~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                           .+++.=..+...  ...+-....-.++|+.|...     ...++....- ..-+|++..|+.+=+++||.
T Consensus        79 -----~~l~~~~~~~~~--~~~~~~~~~~KP~~~~~~~~-----~~~~~~~~~e-~i~IGDs~~Di~~A~~~Gi~  140 (147)
T TIGR01656        79 -----LGVAVDGVLFCP--HHPADNCSCRKPKPGLILEA-----LKRLGVDASR-SLVVGDRLRDLQAARNAGLA  140 (147)
T ss_pred             -----CCCceeEEEECC--CCCCCCCCCCCCCHHHHHHH-----HHHcCCChHH-EEEEcCCHHHHHHHHHCCCC
Confidence                 555410111111  00000000113344444433     3333322222 34688999999999999996

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=97.76  E-value=0.00019  Score=68.56  Aligned_cols=128  Identities=17%  Similarity=0.344  Sum_probs=77.3

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCc--chhHHHHHHHHHHCCceEEEEccCccc---------chHHHHHHHHh
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWA--QNGVTRLFTKIKENGYKLLYLSARAIG---------QSRVTREYLQS  425 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~--h~Gva~l~~~i~~nGY~iiYLSaRpi~---------qa~~Tr~~L~~  425 (567)
                      ..|++++|.||||+..+- ++..+.--.||.  -+||.++.+.++++||++.-+|+.+..         ....++..|+.
T Consensus        12 ~~k~~~~D~Dgtl~~~~~-~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~   90 (166)
T TIGR01664        12 QSKVAAFDLDGTLITTRS-GKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK   90 (166)
T ss_pred             cCcEEEEeCCCceEecCC-CCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence            478999999999998642 121233335784  699999999999999999999986542         11244566666


Q ss_pred             cccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCc--------ccHHhHHHc
Q psy12533        426 VKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKV--------NDVWSYQAV  497 (567)
Q Consensus       426 ~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~--------tDv~aY~~v  497 (567)
                           ++++.-.++. .+..   .   .-.++|+.|+.. ++.+...+.+ ...+|  .|++.        +|+.+=+++
T Consensus        91 -----~gl~~~~ii~-~~~~---~---~~KP~p~~~~~~-~~~~~~~~~~-~~~v~--VGD~~~~~~~~~~~Di~aA~~a  154 (166)
T TIGR01664        91 -----LKVPIQVLAA-THAG---L---YRKPMTGMWEYL-QSQYNSPIKM-TRSFY--VGDAAGRKLDFSDADIKFAKNL  154 (166)
T ss_pred             -----cCCCEEEEEe-cCCC---C---CCCCccHHHHHH-HHHcCCCCCc-hhcEE--EECCCCCCCCCchhHHHHHHHC
Confidence                 6665412222 2211   0   112334565533 2222100111 33444  55765        699999999


Q ss_pred             CCCC
Q psy12533        498 GIPL  501 (567)
Q Consensus       498 GIp~  501 (567)
                      ||+.
T Consensus       155 Gi~~  158 (166)
T TIGR01664       155 GLEF  158 (166)
T ss_pred             CCCc
Confidence            9986

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=97.70  E-value=0.00012  Score=68.81  Aligned_cols=139  Identities=14%  Similarity=0.245  Sum_probs=79.2

Q ss_pred             eEEEEecCCccccCCc----ccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533        359 KIVISDIDGTITKSDV----LGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  433 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~----~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l  433 (567)
                      |+|+|||||||+..-+    .|+..   ++ | ..+|.  ..++++++||++.-+|+++...+   +..+..     +++
T Consensus         2 ~~~~~D~Dgtl~~~~~~~~~~~~~~---~~-~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~---~~~l~~-----~gi   67 (154)
T TIGR01670         2 RLLILDVDGVLTDGKIYYTNNGEEI---KA-FNVRDGY--GIRCALKSGIEVAIITGRKAKLV---EDRCKT-----LGI   67 (154)
T ss_pred             eEEEEeCceeEEcCeEEECCCCcEE---EE-EechhHH--HHHHHHHCCCEEEEEECCCCHHH---HHHHHH-----cCC
Confidence            7899999999996311    12111   11 3 33444  78999999999999999987544   556665     555


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcc
Q psy12533        434 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  513 (567)
Q Consensus       434 P~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  513 (567)
                      +.         +|..     ...+|+.+     ..+..-..-.... ...+|+..+|+.+-+++|++   +..-+....+
T Consensus        68 ~~---------~~~~-----~~~k~~~~-----~~~~~~~~~~~~~-~~~vGDs~~D~~~~~~ag~~---~~v~~~~~~~  124 (154)
T TIGR01670        68 TH---------LYQG-----QSNKLIAF-----SDILEKLALAPEN-VAYIGDDLIDWPVMEKVGLS---VAVADAHPLL  124 (154)
T ss_pred             CE---------EEec-----ccchHHHH-----HHHHHHcCCCHHH-EEEECCCHHHHHHHHHCCCe---EecCCcCHHH
Confidence            42         1111     12334433     3333222211122 56799999999999999996   4333444333


Q ss_pred             cccccccccccH---hhHHhhhhhc
Q psy12533        514 KHEMTQTFQSTY---SNMSYLVDQM  535 (567)
Q Consensus       514 ~~~~~~~~~~sY---~~l~~~vd~~  535 (567)
                       .........+.   .-+.++++.+
T Consensus       125 -~~~a~~i~~~~~~~g~~~~~~~~~  148 (154)
T TIGR01670       125 -IPRADYVTRIAGGRGAVREVCELL  148 (154)
T ss_pred             -HHhCCEEecCCCCCcHHHHHHHHH
Confidence             32232222222   2255665554

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=97.69  E-value=0.00015  Score=69.59  Aligned_cols=94  Identities=13%  Similarity=0.202  Sum_probs=59.3

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  464 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~---GPvl~spd~l~~al~rEvi~k~p~~fK~~  464 (567)
                      .||+.+++..++++ |++.-+|+.....+   +.+|+.     ++++.   -.+....++...   +.. ...|+ -|..
T Consensus        70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~---~~~l~~-----~gl~~~f~~~~~~~~~~~i~---~~~-~~~p~-~k~~  135 (205)
T PRK13582         70 LPGAVEFLDWLRER-FQVVILSDTFYEFA---GPLMRQ-----LGWPTLFCHSLEVDEDGMIT---GYD-LRQPD-GKRQ  135 (205)
T ss_pred             CCCHHHHHHHHHhc-CCEEEEeCCcHHHH---HHHHHH-----cCCchhhcceEEECCCCeEE---Ccc-ccccc-hHHH
Confidence            58999999999999 99999998766544   566666     55542   111122222111   111 11232 3666


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +++.+... +  . . ...+|+..+|+.+.+++|+.
T Consensus       136 ~l~~~~~~-~--~-~-~v~iGDs~~D~~~~~aa~~~  166 (205)
T PRK13582        136 AVKALKSL-G--Y-R-VIAAGDSYNDTTMLGEADAG  166 (205)
T ss_pred             HHHHHHHh-C--C-e-EEEEeCCHHHHHHHHhCCCC
Confidence            77766542 1  2 2 46899999999999999974

>PRK10976 putative hydrolase; Provisional

Probab=97.68  E-value=0.00014  Score=73.03  Aligned_cols=80  Identities=15%  Similarity=0.239  Sum_probs=56.2

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |+|++|+||||..++-  .         ..+...+..++++++|++|+..|||+....   +.+++.     .++ ++|+
T Consensus         3 kli~~DlDGTLl~~~~--~---------is~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~-~~~~   62 (266)
T PRK10976          3 QVVASDLDGTLLSPDH--T---------LSPYAKETLKLLTARGIHFVFATGRHHVDV---GQIRDN-----LEI-KSYM   62 (266)
T ss_pred             eEEEEeCCCCCcCCCC--c---------CCHHHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHh-----cCC-CCeE
Confidence            7899999999998751  1         345578899999999999999999998754   666666     444 3677


Q ss_pred             ecCCCchhhhhhhhhhccCh
Q psy12533        439 LLNPTSLLNAFHTEVIEKKP  458 (567)
Q Consensus       439 l~spd~l~~al~rEvi~k~p  458 (567)
                      +++...+.--...+++..++
T Consensus        63 I~~NGa~i~~~~~~~i~~~~   82 (266)
T PRK10976         63 ITSNGARVHDTDGNLIFSHN   82 (266)
T ss_pred             EEcCCcEEECCCCCEehhhc
Confidence            77665543212334444333

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=97.62  E-value=0.00037  Score=66.61  Aligned_cols=126  Identities=19%  Similarity=0.397  Sum_probs=75.5

Q ss_pred             CCcEEEEecCCccccCCcccccccccccccc--chhHHHHHHHHHHCCceEEEEccCccc---------chHHHHHHHHh
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWA--QNGVTRLFTKIKENGYKLLYLSARAIG---------QSRVTREYLQS  150 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwt--h~GVa~Ly~~i~~nGY~ilYLSaRpi~---------~a~~Tr~~L~~  150 (567)
                      ..|++++|.||||+..+- ++..+.--.||.  -+||.++.+.++++||++.-+|+.+..         ....++..|+.
T Consensus        12 ~~k~~~~D~Dgtl~~~~~-~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~   90 (166)
T TIGR01664        12 QSKVAAFDLDGTLITTRS-GKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK   90 (166)
T ss_pred             cCcEEEEeCCCceEecCC-CCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence            468999999999998653 122233335685  589999999999999999999976542         11234556666


Q ss_pred             cccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHHhCCCCCCCEEEecCCcc--------cchhhhh
Q psy12533        151 VKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKV--------NDVWSYQ  220 (567)
Q Consensus       151 ~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~L~~i~~lf~~~~~pf~agfGNr~--------tDv~aY~  220 (567)
                           .+++.-.++ ..+.        ...++|  +.|+..+ +.+.....+ ..-+|.  |++.        +|+.+=+
T Consensus        91 -----~gl~~~~ii-~~~~--------~~~~KP~p~~~~~~~-~~~~~~~~~-~~~v~V--GD~~~~~~~~~~~Di~aA~  152 (166)
T TIGR01664        91 -----LKVPIQVLA-ATHA--------GLYRKPMTGMWEYLQ-SQYNSPIKM-TRSFYV--GDAAGRKLDFSDADIKFAK  152 (166)
T ss_pred             -----cCCCEEEEE-ecCC--------CCCCCCccHHHHHHH-HHcCCCCCc-hhcEEE--ECCCCCCCCCchhHHHHHH
Confidence                 566531222 2211        112344  4444322 222100111 234454  4654        6999999


Q ss_pred             hcCCCC
Q psy12533        221 AVGIPL  226 (567)
Q Consensus       221 ~vGIp~  226 (567)
                      ++||+.
T Consensus       153 ~aGi~~  158 (166)
T TIGR01664       153 NLGLEF  158 (166)
T ss_pred             HCCCCc
Confidence            999986

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PLN02954 phosphoserine phosphatase

Probab=97.62  E-value=0.00021  Score=69.62  Aligned_cols=100  Identities=14%  Similarity=0.168  Sum_probs=57.4

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee-----cCCCchhhhhh-hhhhccChhHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML-----LNPTSLLNAFH-TEVIEKKPQEF  461 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl-----~spd~l~~al~-rEvi~k~p~~f  461 (567)
                      .||+.++++.++++|+++.-+|+.....+   +..|+.     ++++.=.++     +..++.+.+.. .+...  ...-
T Consensus        86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i---~~~l~~-----~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~--~~~~  155 (224)
T PLN02954         86 SPGIPELVKKLRARGTDVYLVSGGFRQMI---APVAAI-----LGIPPENIFANQILFGDSGEYAGFDENEPTS--RSGG  155 (224)
T ss_pred             CccHHHHHHHHHHCCCEEEEECCCcHHHH---HHHHHH-----hCCChhhEEEeEEEEcCCCcEECccCCCccc--CCcc
Confidence            47999999999999999999999775544   444555     555421222     12222211110 01000  0112


Q ss_pred             HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      |-++++.++...+. . . ...+|+..+|+.|-++.|+.
T Consensus       156 K~~~i~~~~~~~~~-~-~-~i~iGDs~~Di~aa~~~~~~  191 (224)
T PLN02954        156 KAEAVQHIKKKHGY-K-T-MVMIGDGATDLEARKPGGAD  191 (224)
T ss_pred             HHHHHHHHHHHcCC-C-c-eEEEeCCHHHHHhhhcCCCC
Confidence            55666666553322 2 2 45799999999996666654

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.58  E-value=0.00026  Score=69.24  Aligned_cols=68  Identities=21%  Similarity=0.281  Sum_probs=50.8

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      -|+|++|+||||..++.           -..+...+..++++++|.+|+.+|||+....   +.++..     .+++ +|
T Consensus         3 ~kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~-~~   62 (230)
T PRK01158          3 IKAIAIDIDGTITDKDR-----------RLSLKAVEAIRKAEKLGIPVILATGNVLCFA---RAAAKL-----IGTS-GP   62 (230)
T ss_pred             eeEEEEecCCCcCCCCC-----------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHH---HHHHHH-----hCCC-Cc
Confidence            37899999999997741           1345677889999999999999999997754   445544     4454 67


Q ss_pred             eecCCCch
Q psy12533        438 MLLNPTSL  445 (567)
Q Consensus       438 vl~spd~l  445 (567)
                      +++....+
T Consensus        63 ~i~~nGa~   70 (230)
T PRK01158         63 VIAENGGV   70 (230)
T ss_pred             EEEecCeE
Confidence            77766544

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=97.56  E-value=0.00042  Score=64.22  Aligned_cols=127  Identities=17%  Similarity=0.271  Sum_probs=73.4

Q ss_pred             cEEEEecCCccccCCccccccccccccc-cchhHHHHHHHHHHCCceEEEEccCccc------ch------HHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIG------QS------RVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDw-th~GVa~Ly~~i~~nGY~ilYLSaRpi~------~a------~~Tr~~L~~  150 (567)
                      +++++|+||||+...... +.. ...+| ..+|+.+++..++++||++.-+|+.+..      ..      ..++..|+.
T Consensus         1 ~~~~~d~dgtl~~~~~~~-~~~-~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSD-YPR-SLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ   78 (147)
T ss_pred             CeEEEeCCCceeccCCcc-cCC-CHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh
Confidence            579999999999765322 211 12222 4679999999999999999999997631      11      344555555


Q ss_pred             cccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        151 VKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       151 ~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                           .+++.=..+...  ...+  -+...++|   |.+.+..+...++-...- ..-+|++..|+.+=+++||.
T Consensus        79 -----~~l~~~~~~~~~--~~~~--~~~~~~KP---~~~~~~~~~~~~~~~~~e-~i~IGDs~~Di~~A~~~Gi~  140 (147)
T TIGR01656        79 -----LGVAVDGVLFCP--HHPA--DNCSCRKP---KPGLILEALKRLGVDASR-SLVVGDRLRDLQAARNAGLA  140 (147)
T ss_pred             -----CCCceeEEEECC--CCCC--CCCCCCCC---CHHHHHHHHHHcCCChHH-EEEEcCCHHHHHHHHHCCCC
Confidence                 455410111110  0000  00112244   333444444444322222 44578889999999999986

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=97.56  E-value=0.00018  Score=67.52  Aligned_cols=108  Identities=18%  Similarity=0.306  Sum_probs=66.9

Q ss_pred             cEEEEecCCccccCCc----cccccccccccc-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533         84 KIVISDIDGTITKSDV----LGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  158 (567)
Q Consensus        84 kiVISDIDGTITkSD~----lG~il~~lGkDw-th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L  158 (567)
                      |+|++||||||+..-+    .|+..   ++ | ..+|.  ..+.++++||++.-+|+++...+   +..++.     .++
T Consensus         2 ~~~~~D~Dgtl~~~~~~~~~~~~~~---~~-~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~---~~~l~~-----~gi   67 (154)
T TIGR01670         2 RLLILDVDGVLTDGKIYYTNNGEEI---KA-FNVRDGY--GIRCALKSGIEVAIITGRKAKLV---EDRCKT-----LGI   67 (154)
T ss_pred             eEEEEeCceeEEcCeEEECCCCcEE---EE-EechhHH--HHHHHHHCCCEEEEEECCCCHHH---HHHHHH-----cCC
Confidence            6899999999996311    12221   22 3 23343  68889999999999999987544   556665     444


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      +.         ++..     ...+|     +.+..+.....-...- ...+|+..+|+.+-+.+|++
T Consensus        68 ~~---------~~~~-----~~~k~-----~~~~~~~~~~~~~~~~-~~~vGDs~~D~~~~~~ag~~  114 (154)
T TIGR01670        68 TH---------LYQG-----QSNKL-----IAFSDILEKLALAPEN-VAYIGDDLIDWPVMEKVGLS  114 (154)
T ss_pred             CE---------EEec-----ccchH-----HHHHHHHHHcCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence            41         1111     12233     3334443332211122 56799999999999999996

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=97.54  E-value=0.00032  Score=67.33  Aligned_cols=95  Identities=13%  Similarity=0.222  Sum_probs=59.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  189 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~---GPlllsp~~l~~al~REvi~k~p~~fKi~  189 (567)
                      .+|+.++...++++ |++.-+|+....   .++.+|+.     .+++.   -.+....++....   .. ...| .-|..
T Consensus        70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~---~~~~~l~~-----~gl~~~f~~~~~~~~~~~i~~---~~-~~~p-~~k~~  135 (205)
T PRK13582         70 LPGAVEFLDWLRER-FQVVILSDTFYE---FAGPLMRQ-----LGWPTLFCHSLEVDEDGMITG---YD-LRQP-DGKRQ  135 (205)
T ss_pred             CCCHHHHHHHHHhc-CCEEEEeCCcHH---HHHHHHHH-----cCCchhhcceEEECCCCeEEC---cc-cccc-chHHH
Confidence            47999999999999 999999996554   44667766     45541   1111112221110   10 1123 23667


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      +++.+... +   . -...+|+..+|+.+.+++|+..
T Consensus       136 ~l~~~~~~-~---~-~~v~iGDs~~D~~~~~aa~~~v  167 (205)
T PRK13582        136 AVKALKSL-G---Y-RVIAAGDSYNDTTMLGEADAGI  167 (205)
T ss_pred             HHHHHHHh-C---C-eEEEEeCCHHHHHHHHhCCCCE
Confidence            77766543 2   1 2568899999999999999743

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=97.53  E-value=0.0002  Score=69.08  Aligned_cols=91  Identities=20%  Similarity=0.356  Sum_probs=61.3

Q ss_pred             EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec
Q psy12533        361 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL  440 (567)
Q Consensus       361 VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~  440 (567)
                      |+|||||||..++          .. ..+-..+.++.++++|++++..|||+....   +.++..     .+++ .|+++
T Consensus         1 i~~DlDGTLl~~~----------~~-i~~~~~~al~~l~~~g~~~~i~TGR~~~~~---~~~~~~-----~~~~-~~~I~   60 (254)
T PF08282_consen    1 IFSDLDGTLLNSD----------GK-ISPETIEALKELQEKGIKLVIATGRSYSSI---KRLLKE-----LGID-DYFIC   60 (254)
T ss_dssp             EEEECCTTTCSTT----------SS-SCHHHHHHHHHHHHTTCEEEEECSSTHHHH---HHHHHH-----TTHC-SEEEE
T ss_pred             cEEEECCceecCC----------Ce-eCHHHHHHHHhhcccceEEEEEccCccccc---cccccc-----ccch-hhhcc
Confidence            7899999998874          22 457889999999999999999999998765   666665     3444 67776


Q ss_pred             CCCchhhhhhhhhhccCh--hHHHHHHHHHHHh
Q psy12533        441 NPTSLLNAFHTEVIEKKP--QEFKISCLRDIMA  471 (567)
Q Consensus       441 spd~l~~al~rEvi~k~p--~~fK~~~L~~i~~  471 (567)
                      ....+.---..|++...+  ...-.++++.+..
T Consensus        61 ~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~   93 (254)
T PF08282_consen   61 SNGALIDDPKGKILYEKPIDSDDVKKILKYLKE   93 (254)
T ss_dssp             GGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred             cccceeeecccccchhhheeccchhheeehhhh
Confidence            665554233455554444  2233334444444

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.52  E-value=0.00033  Score=70.39  Aligned_cols=80  Identities=23%  Similarity=0.397  Sum_probs=62.3

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      -|+|++|+||||+.++.          . .++-..+..++++++|++++..|||+...+   +.+++.+     ++. ||
T Consensus         3 ~kli~~DlDGTLl~~~~----------~-i~~~~~~al~~~~~~g~~v~iaTGR~~~~~---~~~~~~l-----~~~-~~   62 (264)
T COG0561           3 IKLLAFDLDGTLLDSNK----------T-ISPETKEALARLREKGVKVVLATGRPLPDV---LSILEEL-----GLD-GP   62 (264)
T ss_pred             eeEEEEcCCCCccCCCC----------c-cCHHHHHHHHHHHHCCCEEEEECCCChHHH---HHHHHHc-----CCC-cc
Confidence            58899999999999862          1 678889999999999999999999999554   7777773     333 38


Q ss_pred             eecCCCchhhhhhhhhhccCh
Q psy12533        438 MLLNPTSLLNAFHTEVIEKKP  458 (567)
Q Consensus       438 vl~spd~l~~al~rEvi~k~p  458 (567)
                      +++...+..... .|++.+++
T Consensus        63 ~I~~NGa~i~~~-~~~i~~~~   82 (264)
T COG0561          63 LITFNGALIYNG-GELLFQKP   82 (264)
T ss_pred             EEEeCCeEEecC-CcEEeeec
Confidence            888777766544 56666555

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.51  E-value=0.00034  Score=69.96  Aligned_cols=81  Identities=21%  Similarity=0.407  Sum_probs=57.9

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      -|+++|||||||..++.           ...+-..+..++++++|++|+..|||+...   ++.+++.     .++ .+|
T Consensus         3 ~kli~~DlDGTLl~~~~-----------~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~---~~~~~~~-----l~~-~~~   62 (272)
T PRK10530          3 YRVIALDLDGTLLTPKK-----------TILPESLEALARAREAGYKVIIVTGRHHVA---IHPFYQA-----LAL-DTP   62 (272)
T ss_pred             ccEEEEeCCCceECCCC-----------ccCHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHHHHh-----cCC-CCC
Confidence            47899999999997741           134556788999999999999999999764   3667766     344 467


Q ss_pred             eecCCCchhhhh-hhhhhccCh
Q psy12533        438 MLLNPTSLLNAF-HTEVIEKKP  458 (567)
Q Consensus       438 vl~spd~l~~al-~rEvi~k~p  458 (567)
                      ++++...+.--. ..|++..++
T Consensus        63 ~I~~NGa~i~d~~~~~~l~~~~   84 (272)
T PRK10530         63 AICCNGTYLYDYQAKKVLEADP   84 (272)
T ss_pred             EEEcCCcEEEecCCCEEEEecC
Confidence            887776654322 345555544

>PLN02954 phosphoserine phosphatase

Probab=97.51  E-value=0.00026  Score=69.03  Aligned_cols=100  Identities=14%  Similarity=0.165  Sum_probs=57.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee-----cCCCchhhhhhhhhhcc-ChhHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML-----LNPTSLLNAFHTEVIEK-KPQEF  186 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll-----lsp~~l~~al~REvi~k-~p~~f  186 (567)
                      .+|+.++.+.++++|+++.-+|+.....   ++..|+.     ++++.=.++     +..++...+.  +.... ....-
T Consensus        86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~---i~~~l~~-----~gi~~~~~~~~~~~~~~~g~~~g~--~~~~~~~~~~~  155 (224)
T PLN02954         86 SPGIPELVKKLRARGTDVYLVSGGFRQM---IAPVAAI-----LGIPPENIFANQILFGDSGEYAGF--DENEPTSRSGG  155 (224)
T ss_pred             CccHHHHHHHHHHCCCEEEEECCCcHHH---HHHHHHH-----hCCChhhEEEeEEEEcCCCcEECc--cCCCcccCCcc
Confidence            3699999999999999999999966443   4445555     455421222     1112111110  00000 00112


Q ss_pred             HHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        187 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       187 Ki~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      |-++++.++...+.  . -...+|+..+|+.|-++.|+.
T Consensus       156 K~~~i~~~~~~~~~--~-~~i~iGDs~~Di~aa~~~~~~  191 (224)
T PLN02954        156 KAEAVQHIKKKHGY--K-TMVMIGDGATDLEARKPGGAD  191 (224)
T ss_pred             HHHHHHHHHHHcCC--C-ceEEEeCCHHHHHhhhcCCCC
Confidence            66676766665432  1 256789999999996665654

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=97.51  E-value=0.0012  Score=62.91  Aligned_cols=128  Identities=15%  Similarity=0.201  Sum_probs=72.8

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcc-c-------chHHHHHHHHh-cc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAI-G-------QSRVTREYLQS-VK  427 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi-~-------qa~~Tr~~L~~-~~  427 (567)
                      -|++++|-||||...-  ..+.-.+ ..| ..+|+.++.+.++++||++.-+|..+- .       +.+..++++.. ++
T Consensus         3 ~~~~~~d~~~t~~~~~--~~~~~~~-~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~   79 (181)
T PRK08942          3 MKAIFLDRDGVINVDS--DGYVKSP-DEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLA   79 (181)
T ss_pred             ccEEEEECCCCcccCC--ccccCCH-HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence            4899999999996652  1222111 234 688999999999999999999998752 1       11122344432 22


Q ss_pred             cCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        428 QEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       428 Q~~~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      .  .++.--.++.+.+.-    ..++.  .++|+.|...+ +.+..  ++ ..  ..-+|++.+|+.+-+++|+.
T Consensus        80 ~--~g~~f~~i~~~~~~~----~~~~~~~KP~p~~~~~~~-~~l~~--~~-~~--~~~VgDs~~Di~~A~~aG~~  142 (181)
T PRK08942         80 D--RGGRLDGIYYCPHHP----EDGCDCRKPKPGMLLSIA-ERLNI--DL-AG--SPMVGDSLRDLQAAAAAGVT  142 (181)
T ss_pred             H--cCCccceEEECCCCC----CCCCcCCCCCHHHHHHHH-HHcCC--Ch-hh--EEEEeCCHHHHHHHHHCCCe
Confidence            2  233211233322110    01112  33456665443 22211  11 22  34589999999999999993

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.50  E-value=0.00033  Score=67.63  Aligned_cols=110  Identities=18%  Similarity=0.318  Sum_probs=67.1

Q ss_pred             CCeEEEEecCCccccCCc----ccccccccCcCCcc-hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533        357 NDKIVISDIDGTITKSDV----LGHVLPIMGKDWAQ-NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  431 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~----~G~~~~~~GkDw~h-~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~  431 (567)
                      .-|+|++|||||||...+    .|+-+    +.|.. .|  ...+.++++|+++..+|+|+...   ++..++.     .
T Consensus        20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~----~~~~~~d~--~~i~~L~~~Gi~v~I~T~~~~~~---v~~~l~~-----l   85 (183)
T PRK09484         20 NIRLLICDVDGVFSDGLIYMGNNGEEL----KAFNVRDG--YGIRCLLTSGIEVAIITGRKSKL---VEDRMTT-----L   85 (183)
T ss_pred             CceEEEEcCCeeeecCEEEEcCCCCEE----EEEeccch--HHHHHHHHCCCEEEEEeCCCcHH---HHHHHHH-----c
Confidence            578899999999998632    01111    12222 11  23445678999999999996644   4667766     4


Q ss_pred             cCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        432 TLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       432 ~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +++.   +      |.+     ...     |.+.++.+..-+.-...- .+.+|+..+|+.+-+.+|++
T Consensus        86 gl~~---~------f~g-----~~~-----k~~~l~~~~~~~gl~~~e-v~~VGDs~~D~~~a~~aG~~  134 (183)
T PRK09484         86 GITH---L------YQG-----QSN-----KLIAFSDLLEKLAIAPEQ-VAYIGDDLIDWPVMEKVGLS  134 (183)
T ss_pred             CCce---e------ecC-----CCc-----HHHHHHHHHHHhCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence            4431   1      111     012     344455544433322222 56899999999999999996

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=97.49  E-value=0.00025  Score=69.23  Aligned_cols=68  Identities=19%  Similarity=0.346  Sum_probs=50.6

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |+|++|+||||..++.           -.++...+..++++++|++++.+|||+....   +.++..     .++ .+|+
T Consensus         2 k~v~~DlDGTLl~~~~-----------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~---~~~~~~-----l~~-~~~~   61 (215)
T TIGR01487         2 KLVAIDIDGTLTEPNR-----------MISERAIEAIRKAEKKGIPVSLVTGNTVPFA---RALAVL-----IGT-SGPV   61 (215)
T ss_pred             cEEEEecCCCcCCCCc-----------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhH---HHHHHH-----hCC-CCcE
Confidence            7899999999997641           2567889999999999999999999988654   555555     333 3566


Q ss_pred             ecCCCchh
Q psy12533        439 LLNPTSLL  446 (567)
Q Consensus       439 l~spd~l~  446 (567)
                      ++....+.
T Consensus        62 i~~NGa~i   69 (215)
T TIGR01487        62 VAENGGVI   69 (215)
T ss_pred             EEccCcEE
Confidence            66555443

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=97.49  E-value=0.00055  Score=65.04  Aligned_cols=106  Identities=15%  Similarity=0.233  Sum_probs=61.8

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--Cceec-------CCCchhhhhhhhhhccCh
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLL-------NPTSLLNAFHTEVIEKKP  183 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlll-------sp~~l~~al~REvi~k~p  183 (567)
                      .+|+.++...++++||++..+|+......   +..++.     .++..  +-.+.       .|+...      ..... 
T Consensus        82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~---~~~l~~-----~g~~~~~~~~~~~~~~g~~~p~~~~------~~~~~-  146 (201)
T TIGR01491        82 RDYAEELVRWLKEKGLKTAIVSGGIMCLA---KKVAEK-----LNPDYVYSNELVFDEKGFIQPDGIV------RVTFD-  146 (201)
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHHH-----hCCCeEEEEEEEEcCCCeEecceee------EEccc-
Confidence            35888899999999999999999765444   444443     11110  00000       011100      00001 


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceec
Q psy12533        184 QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  240 (567)
Q Consensus       184 ~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  240 (567)
                        -|.+.++.++..+.-...- ...+|++.+|+.+-+.+|++    |.+|+++.+..
T Consensus       147 --~k~~~~~~~~~~~~~~~~~-~i~iGDs~~D~~~a~~ag~~----~a~~~~~~~~~  196 (201)
T TIGR01491       147 --NKGEAVERLKRELNPSLTE-TVAVGDSKNDLPMFEVADIS----ISLGDEGHADY  196 (201)
T ss_pred             --cHHHHHHHHHHHhCCCHHH-EEEEcCCHhHHHHHHhcCCe----EEECCCccchh
Confidence              1445555554443211111 45778999999999999984    78999887743

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=97.48  E-value=0.00063  Score=64.64  Aligned_cols=106  Identities=15%  Similarity=0.239  Sum_probs=62.4

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--Cceec-------CCCchhhhhhhhhhccCh
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLL-------NPTSLLNAFHTEVIEKKP  458 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~-------spd~l~~al~rEvi~k~p  458 (567)
                      .+|+.++...++++||++..+|+......   +..++.     .++..  +-.+.       .|+...      .....+
T Consensus        82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~---~~~l~~-----~g~~~~~~~~~~~~~~g~~~p~~~~------~~~~~~  147 (201)
T TIGR01491        82 RDYAEELVRWLKEKGLKTAIVSGGIMCLA---KKVAEK-----LNPDYVYSNELVFDEKGFIQPDGIV------RVTFDN  147 (201)
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHHH-----hCCCeEEEEEEEEcCCCeEecceee------EEcccc
Confidence            56888999999999999999999865544   444444     22211  00000       011100      000111


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533        459 QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  515 (567)
Q Consensus       459 ~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  515 (567)
                         |.+.++.++..+...... ...+|++.+|+.+-+++|++    |.+|+.+.+..
T Consensus       148 ---k~~~~~~~~~~~~~~~~~-~i~iGDs~~D~~~a~~ag~~----~a~~~~~~~~~  196 (201)
T TIGR01491       148 ---KGEAVERLKRELNPSLTE-TVAVGDSKNDLPMFEVADIS----ISLGDEGHADY  196 (201)
T ss_pred             ---HHHHHHHHHHHhCCCHHH-EEEEcCCHhHHHHHHhcCCe----EEECCCccchh
Confidence               444455544432211112 35789999999999999994    68999888744

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=97.48  E-value=0.00021  Score=72.21  Aligned_cols=80  Identities=15%  Similarity=0.322  Sum_probs=57.0

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |+|++|+||||..++-           ...+-..+..++++++|.+|+..|||+...+   +.+++.     .+++ +|+
T Consensus         3 kli~~DlDGTLl~~~~-----------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~-~~~   62 (272)
T PRK15126          3 RLAAFDMDGTLLMPDH-----------HLGEKTLSTLARLRERDITLTFATGRHVLEM---QHILGA-----LSLD-AYL   62 (272)
T ss_pred             cEEEEeCCCcCcCCCC-----------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHH---HHHHHH-----cCCC-CcE
Confidence            7899999999998751           2355678889999999999999999998754   677766     4443 677


Q ss_pred             ecCCCchhhhhhhhhhccCh
Q psy12533        439 LLNPTSLLNAFHTEVIEKKP  458 (567)
Q Consensus       439 l~spd~l~~al~rEvi~k~p  458 (567)
                      +++...+.--...+++..++
T Consensus        63 I~~NGa~I~~~~~~~l~~~~   82 (272)
T PRK15126         63 ITGNGTRVHSLEGELLHRQD   82 (272)
T ss_pred             EecCCcEEEcCCCCEEEeec
Confidence            77666554212334444333

>PRK10976 putative hydrolase; Provisional

Probab=97.47  E-value=0.00036  Score=70.07  Aligned_cols=68  Identities=16%  Similarity=0.278  Sum_probs=50.9

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      |+|++|+||||..++-  .         ..+...+..++++++|++|+.+|||+....   +.+++.     .++ .+|+
T Consensus         3 kli~~DlDGTLl~~~~--~---------is~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~-~~~~   62 (266)
T PRK10976          3 QVVASDLDGTLLSPDH--T---------LSPYAKETLKLLTARGIHFVFATGRHHVDV---GQIRDN-----LEI-KSYM   62 (266)
T ss_pred             eEEEEeCCCCCcCCCC--c---------CCHHHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHh-----cCC-CCeE
Confidence            7899999999998752  1         234467889999999999999999998754   566666     344 3677


Q ss_pred             ecCCCchh
Q psy12533        164 LLNPTSLL  171 (567)
Q Consensus       164 llsp~~l~  171 (567)
                      ++....+.
T Consensus        63 I~~NGa~i   70 (266)
T PRK10976         63 ITSNGARV   70 (266)
T ss_pred             EEcCCcEE
Confidence            76665543

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=97.47  E-value=0.00062  Score=64.88  Aligned_cols=130  Identities=20%  Similarity=0.229  Sum_probs=75.0

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcc------------cchHHHHHHHH
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAI------------GQSRVTREYLQ  424 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi------------~qa~~Tr~~L~  424 (567)
                      .|++.||-||||+..- -+++....-.+| .-+||.++.+.++++||++.-+|.-+.            .....++..|.
T Consensus         1 ~~~~~~d~dg~l~~~~-~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~   79 (161)
T TIGR01261         1 QKILFIDRDGTLIEEP-PSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFR   79 (161)
T ss_pred             CCEEEEeCCCCccccC-CCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence            4789999999999842 123332222233 678999999999999999999998531            12234455555


Q ss_pred             hcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        425 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       425 ~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      .     ++++-=-++.+|...    .-++-.++|   |.+.+..+...+.-.... ..-+|++.+|+.+=+++|+..
T Consensus        80 ~-----~gl~fd~ii~~~~~~----~~~~~~~KP---~~~~~~~~~~~~~~~~~e-~l~IGD~~~Di~~A~~aGi~~  143 (161)
T TIGR01261        80 S-----QGIIFDDVLICPHFP----DDNCDCRKP---KIKLLEPYLKKNLIDKAR-SYVIGDRETDMQLAENLGIRG  143 (161)
T ss_pred             H-----CCCceeEEEECCCCC----CCCCCCCCC---CHHHHHHHHHHcCCCHHH-eEEEeCCHHHHHHHHHCCCeE
Confidence            5     555411122232100    012223355   223333333322211111 235778899999999999974

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=97.46  E-value=0.00022  Score=69.33  Aligned_cols=103  Identities=19%  Similarity=0.276  Sum_probs=58.1

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC----CCchhhh-hhhhhhc--cChhH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN----PTSLLNA-FHTEVIE--KKPQE  460 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~s----pd~l~~a-l~rEvi~--k~p~~  460 (567)
                      .+|+.++++.++++||++.-+|+-..   ...+..++.     .+++.  ++.+    .++.+.+ ...+...  .+|+.
T Consensus        87 ~~g~~~~l~~l~~~g~~~~IvS~~~~---~~~~~~l~~-----~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  156 (219)
T TIGR00338        87 TEGAEELVKTLKEKGYKVAVISGGFD---LFAEHVKDK-----LGLDA--AFANRLEVEDGKLTGLVEGPIVDASYKGKT  156 (219)
T ss_pred             CCCHHHHHHHHHHCCCEEEEECCCcH---HHHHHHHHH-----cCCCc--eEeeEEEEECCEEEEEecCcccCCcccHHH
Confidence            56888999999999999999998553   344555555     44442  2210    0111111 0111111  24555


Q ss_pred             HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCC
Q psy12533        461 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  510 (567)
Q Consensus       461 fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  510 (567)
                      |+..     ...+.-...- ...+|+..+|+.+-+++|++    +.+|+.
T Consensus       157 ~~~~-----~~~~~~~~~~-~i~iGDs~~Di~aa~~ag~~----i~~~~~  196 (219)
T TIGR00338       157 LLIL-----LRKEGISPEN-TVAVGDGANDLSMIKAAGLG----IAFNAK  196 (219)
T ss_pred             HHHH-----HHHcCCCHHH-EEEEECCHHHHHHHHhCCCe----EEeCCC
Confidence            5433     2222111112 23478889999999999997    366765

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=97.45  E-value=0.001  Score=63.37  Aligned_cols=132  Identities=17%  Similarity=0.204  Sum_probs=74.4

Q ss_pred             eEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcc-c-------chHHHHHHHHhcccC
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAI-G-------QSRVTREYLQSVKQE  429 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi-~-------qa~~Tr~~L~~~~Q~  429 (567)
                      |++.+|.||||++..   ++. .-..+| .-|||.++...++++||++.-+|+-+. +       ..+..+.++.++-+.
T Consensus         2 ~~~~~D~Dgtl~~~~---~~~-~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~   77 (176)
T TIGR00213         2 KAIFLDRDGTINIDH---GYV-HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE   77 (176)
T ss_pred             CEEEEeCCCCEeCCC---CCC-CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH
Confidence            789999999999531   221 112355 568999999999999999999998763 1       122334555442221


Q ss_pred             CccCCCCceecCCCchhh--hhhhhhh--ccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        430 DLTLPEGPMLLNPTSLLN--AFHTEVI--EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       430 ~~~lP~GPvl~spd~l~~--al~rEvi--~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                       .+++.--++.++..-..  -+..+..  .++|+.|+.++ +.+    .-...- ...+|++.+|+.+=+++|++.
T Consensus        78 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~-~~~----~~~~~~-~v~VGDs~~Di~aA~~aG~~~  146 (176)
T TIGR00213        78 -RDVDLDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQAR-KEL----HIDMAQ-SYMVGDKLEDMQAGVAAKVKT  146 (176)
T ss_pred             -cCCCccEEEECCCCCcccccccCCCCCCCCCHHHHHHHH-HHc----CcChhh-EEEEcCCHHHHHHHHHCCCcE
Confidence             22221112222211000  0001111  34556666543 222    111122 235899999999999999974

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=97.40  E-value=0.00018  Score=69.38  Aligned_cols=89  Identities=20%  Similarity=0.399  Sum_probs=57.7

Q ss_pred             EEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec
Q psy12533         86 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL  165 (567)
Q Consensus        86 VISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlll  165 (567)
                      |+|||||||..++          +. ..+-..+..+.++++|++++.+|||+....   +.++..     .+++ .|+++
T Consensus         1 i~~DlDGTLl~~~----------~~-i~~~~~~al~~l~~~g~~~~i~TGR~~~~~---~~~~~~-----~~~~-~~~I~   60 (254)
T PF08282_consen    1 IFSDLDGTLLNSD----------GK-ISPETIEALKELQEKGIKLVIATGRSYSSI---KRLLKE-----LGID-DYFIC   60 (254)
T ss_dssp             EEEECCTTTCSTT----------SS-SCHHHHHHHHHHHHTTCEEEEECSSTHHHH---HHHHHH-----TTHC-SEEEE
T ss_pred             cEEEECCceecCC----------Ce-eCHHHHHHHHhhcccceEEEEEccCccccc---cccccc-----ccch-hhhcc
Confidence            7899999999875          22 346788889999999999999999998765   555555     3343 66666


Q ss_pred             CCCchhhhhhhhhhccChhHHHHHHHHHHHH
Q psy12533        166 NPTSLLNAFHTEVIEKKPQEFKISCLRDIMA  196 (567)
Q Consensus       166 sp~~l~~al~REvi~k~p~~fKi~~L~~i~~  196 (567)
                      ....+..--..+++...+  ++.+.+..|..
T Consensus        61 ~nGa~i~~~~~~~l~~~~--i~~~~~~~i~~   89 (254)
T PF08282_consen   61 SNGALIDDPKGKILYEKP--IDSDDVKKILK   89 (254)
T ss_dssp             GGGTEEEETTTEEEEEES--B-HHHHHHHHH
T ss_pred             cccceeeecccccchhhh--eeccchhheee
Confidence            665544122344443322  34444444433

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=97.39  E-value=0.00026  Score=68.81  Aligned_cols=105  Identities=19%  Similarity=0.261  Sum_probs=56.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCC----Cchhhh-hhhhhhccChhHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNP----TSLLNA-FHTEVIEKKPQEFK  187 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp----~~l~~a-l~REvi~k~p~~fK  187 (567)
                      .+|+.++.+.++++|+++.-+|+..   ....+..++.     .+++.  ++.+.    ++.+.+ ...+.....|   |
T Consensus        87 ~~g~~~~l~~l~~~g~~~~IvS~~~---~~~~~~~l~~-----~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---k  153 (219)
T TIGR00338        87 TEGAEELVKTLKEKGYKVAVISGGF---DLFAEHVKDK-----LGLDA--AFANRLEVEDGKLTGLVEGPIVDASY---K  153 (219)
T ss_pred             CCCHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHH-----cCCCc--eEeeEEEEECCEEEEEecCcccCCcc---c
Confidence            3588889999999999999999954   3444555555     34432  22110    111100 0001111111   3


Q ss_pred             HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCC
Q psy12533        188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  235 (567)
Q Consensus       188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  235 (567)
                      .+.++.+...+.-...- ...+|+..+|+.+-+++|++    +.+|+.
T Consensus       154 ~~~~~~~~~~~~~~~~~-~i~iGDs~~Di~aa~~ag~~----i~~~~~  196 (219)
T TIGR00338       154 GKTLLILLRKEGISPEN-TVAVGDGANDLSMIKAAGLG----IAFNAK  196 (219)
T ss_pred             HHHHHHHHHHcCCCHHH-EEEEECCHHHHHHHHhCCCe----EEeCCC
Confidence            33333333332211111 33478889999999999997    356664

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=97.38  E-value=0.00041  Score=67.71  Aligned_cols=68  Identities=19%  Similarity=0.346  Sum_probs=50.7

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      |+|++|+||||..++.           -..+...+..++++++|++|+.+|||+....   +.+++.     .++ .+|+
T Consensus         2 k~v~~DlDGTLl~~~~-----------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~---~~~~~~-----l~~-~~~~   61 (215)
T TIGR01487         2 KLVAIDIDGTLTEPNR-----------MISERAIEAIRKAEKKGIPVSLVTGNTVPFA---RALAVL-----IGT-SGPV   61 (215)
T ss_pred             cEEEEecCCCcCCCCc-----------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhH---HHHHHH-----hCC-CCcE
Confidence            6899999999997641           2456788889999999999999999988654   555554     333 3577


Q ss_pred             ecCCCchh
Q psy12533        164 LLNPTSLL  171 (567)
Q Consensus       164 llsp~~l~  171 (567)
                      ++....+.
T Consensus        62 i~~NGa~i   69 (215)
T TIGR01487        62 VAENGGVI   69 (215)
T ss_pred             EEccCcEE
Confidence            77665443

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.37  E-value=0.00046  Score=70.11  Aligned_cols=71  Identities=17%  Similarity=0.349  Sum_probs=53.0

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  436 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G  436 (567)
                      ..++|++|+||||..++.           ...+-..+..++++++|.+|+-.|||+....   +.+++.     .+++..
T Consensus         6 ~~~lI~~DlDGTLL~~~~-----------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i---~~~~~~-----l~~~~~   66 (271)
T PRK03669          6 DPLLIFTDLDGTLLDSHT-----------YDWQPAAPWLTRLREAQVPVILCSSKTAAEM---LPLQQT-----LGLQGL   66 (271)
T ss_pred             CCeEEEEeCccCCcCCCC-----------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHH-----hCCCCC
Confidence            468899999999997641           1233466788999999999999999998654   667766     455445


Q ss_pred             ceecCCCchh
Q psy12533        437 PMLLNPTSLL  446 (567)
Q Consensus       437 Pvl~spd~l~  446 (567)
                      |+++...++.
T Consensus        67 ~~I~~NGa~I   76 (271)
T PRK03669         67 PLIAENGAVI   76 (271)
T ss_pred             cEEEeCCCEE
Confidence            7777666543

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.36  E-value=0.00042  Score=67.72  Aligned_cols=67  Identities=21%  Similarity=0.304  Sum_probs=49.1

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      |+|++|+||||..++.           -..+...+..++++++|.+|+.+|||+....   +.++..     .+++ +|+
T Consensus         4 kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~-~~~   63 (230)
T PRK01158          4 KAIAIDIDGTITDKDR-----------RLSLKAVEAIRKAEKLGIPVILATGNVLCFA---RAAAKL-----IGTS-GPV   63 (230)
T ss_pred             eEEEEecCCCcCCCCC-----------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHH---HHHHHH-----hCCC-CcE
Confidence            7899999999997752           1234567788889999999999999997754   445544     4453 677


Q ss_pred             ecCCCch
Q psy12533        164 LLNPTSL  170 (567)
Q Consensus       164 llsp~~l  170 (567)
                      ++....+
T Consensus        64 i~~nGa~   70 (230)
T PRK01158         64 IAENGGV   70 (230)
T ss_pred             EEecCeE
Confidence            7665443

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=97.34  E-value=0.00061  Score=68.81  Aligned_cols=68  Identities=16%  Similarity=0.302  Sum_probs=51.7

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      |+|++|+||||..++.           .-.+-..+..++++++|.+|+.+|||+...+   +.+++.     .+++ +|+
T Consensus         3 kli~~DlDGTLl~~~~-----------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~-~~~   62 (272)
T PRK15126          3 RLAAFDMDGTLLMPDH-----------HLGEKTLSTLARLRERDITLTFATGRHVLEM---QHILGA-----LSLD-AYL   62 (272)
T ss_pred             cEEEEeCCCcCcCCCC-----------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHH---HHHHHH-----cCCC-CcE
Confidence            7899999999998752           1344567888889999999999999998754   677776     4443 677


Q ss_pred             ecCCCchh
Q psy12533        164 LLNPTSLL  171 (567)
Q Consensus       164 llsp~~l~  171 (567)
                      +++...+.
T Consensus        63 I~~NGa~I   70 (272)
T PRK15126         63 ITGNGTRV   70 (272)
T ss_pred             EecCCcEE
Confidence            76665544

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.34  E-value=0.00051  Score=69.00  Aligned_cols=82  Identities=20%  Similarity=0.338  Sum_probs=57.2

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC--CC
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL--PE  435 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l--P~  435 (567)
                      -|+|++|+||||..++.           -..+-..+..++++++|++|+..|||+...+   +.+++.     .++  |.
T Consensus         3 ~kli~~DlDGTLl~~~~-----------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~~~~   63 (270)
T PRK10513          3 IKLIAIDMDGTLLLPDH-----------TISPAVKQAIAAARAKGVNVVLTTGRPYAGV---HRYLKE-----LHMEQPG   63 (270)
T ss_pred             eEEEEEecCCcCcCCCC-----------ccCHHHHHHHHHHHHCCCEEEEecCCChHHH---HHHHHH-----hCCCCCC
Confidence            48899999999998741           1344567889999999999999999998854   667766     333  34


Q ss_pred             CceecCCCchhhh-hhhhhhccCh
Q psy12533        436 GPMLLNPTSLLNA-FHTEVIEKKP  458 (567)
Q Consensus       436 GPvl~spd~l~~a-l~rEvi~k~p  458 (567)
                      ++++++...+.-- -..+++..++
T Consensus        64 ~~~I~~NGa~i~~~~~~~~i~~~~   87 (270)
T PRK10513         64 DYCITNNGALVQKAADGETVAQTA   87 (270)
T ss_pred             CeEEEcCCeEEEECCCCCEEEecC
Confidence            5777766655421 1234455444

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.29  E-value=0.00037  Score=70.02  Aligned_cols=80  Identities=23%  Similarity=0.395  Sum_probs=59.1

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      .|+|++|+||||+.++..           -++-..+..++++++|++++.+|||+...   .+.+++.+     ++. ||
T Consensus         3 ~kli~~DlDGTLl~~~~~-----------i~~~~~~al~~~~~~g~~v~iaTGR~~~~---~~~~~~~l-----~~~-~~   62 (264)
T COG0561           3 IKLLAFDLDGTLLDSNKT-----------ISPETKEALARLREKGVKVVLATGRPLPD---VLSILEEL-----GLD-GP   62 (264)
T ss_pred             eeEEEEcCCCCccCCCCc-----------cCHHHHHHHHHHHHCCCEEEEECCCChHH---HHHHHHHc-----CCC-cc
Confidence            478999999999999631           56778888999999999999999999944   47777773     332 37


Q ss_pred             eecCCCchhhhhhhhhhccCh
Q psy12533        163 MLLNPTSLLNAFHTEVIEKKP  183 (567)
Q Consensus       163 lllsp~~l~~al~REvi~k~p  183 (567)
                      +++...++.... -|++.+++
T Consensus        63 ~I~~NGa~i~~~-~~~i~~~~   82 (264)
T COG0561          63 LITFNGALIYNG-GELLFQKP   82 (264)
T ss_pred             EEEeCCeEEecC-CcEEeeec
Confidence            887777665433 34444433

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.28  E-value=0.00055  Score=66.86  Aligned_cols=68  Identities=21%  Similarity=0.316  Sum_probs=50.8

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  439 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl  439 (567)
                      .|++|+||||+.++.          .-..+ ..+..++++++|++++.+|+|+....   +.+++.     .+++..|++
T Consensus         1 ~i~~DlDGTLL~~~~----------~~~~~-~~~~l~~l~~~gi~~~i~TgR~~~~~---~~~~~~-----l~~~~~~~I   61 (221)
T TIGR02463         1 WVFSDLDGTLLDSHS----------YDWQP-AAPWLTRLQEAGIPVILCTSKTAAEV---EYLQKA-----LGLTGDPYI   61 (221)
T ss_pred             CEEEeCCCCCcCCCC----------CCcHH-HHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCCCCcEE
Confidence            389999999998751          11233 67899999999999999999998665   556655     445446788


Q ss_pred             cCCCchh
Q psy12533        440 LNPTSLL  446 (567)
Q Consensus       440 ~spd~l~  446 (567)
                      +...++.
T Consensus        62 ~~NGa~i   68 (221)
T TIGR02463        62 AENGAAI   68 (221)
T ss_pred             EeCCcEE
Confidence            7776654

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=97.27  E-value=0.0012  Score=62.93  Aligned_cols=131  Identities=20%  Similarity=0.222  Sum_probs=76.2

Q ss_pred             CcEEEEecCCccccCCcccccccccccc-ccchhHHHHHHHHHHCCceEEEEccCcc------------cchHHHHHHHH
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKD-WAQNGVTRLFTKIKENGYKLLYLSARAI------------GQSRVTREYLQ  149 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkD-wth~GVa~Ly~~i~~nGY~ilYLSaRpi------------~~a~~Tr~~L~  149 (567)
                      .|++.+|.||||+..-. +++....-.+ +.-+||.++...++++||++.-+|.-+-            .....+...|.
T Consensus         1 ~~~~~~d~dg~l~~~~~-~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~   79 (161)
T TIGR01261         1 QKILFIDRDGTLIEEPP-SDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFR   79 (161)
T ss_pred             CCEEEEeCCCCccccCC-CccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence            47999999999998422 2332221122 3557999999999999999999998531            12234455555


Q ss_pred             hcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCC
Q psy12533        150 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLS  227 (567)
Q Consensus       150 ~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~  227 (567)
                      .     ++++-=-++.+|...    .-++..++|   |.+.+..+.+.+.-...- ..-+|++.+|+.+=+++|+..-
T Consensus        80 ~-----~gl~fd~ii~~~~~~----~~~~~~~KP---~~~~~~~~~~~~~~~~~e-~l~IGD~~~Di~~A~~aGi~~i  144 (161)
T TIGR01261        80 S-----QGIIFDDVLICPHFP----DDNCDCRKP---KIKLLEPYLKKNLIDKAR-SYVIGDRETDMQLAENLGIRGI  144 (161)
T ss_pred             H-----CCCceeEEEECCCCC----CCCCCCCCC---CHHHHHHHHHHcCCCHHH-eEEEeCCHHHHHHHHHCCCeEE
Confidence            5     555411122232100    012223455   334444444443211111 3356788999999999999754

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=97.26  E-value=0.003  Score=60.27  Aligned_cols=130  Identities=14%  Similarity=0.132  Sum_probs=71.0

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcc-c-------chHHHHHHHHhcccC
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAI-G-------QSRVTREYLQSVKQE  154 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi-~-------~a~~Tr~~L~~~~q~  154 (567)
                      -|++++|-||||.....  .+.-....--..+||.++.+.++++||++.-+|..+- .       +.+..++++..+-+.
T Consensus         3 ~~~~~~d~~~t~~~~~~--~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~   80 (181)
T PRK08942          3 MKAIFLDRDGVINVDSD--GYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD   80 (181)
T ss_pred             ccEEEEECCCCcccCCc--cccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH
Confidence            47999999999976531  2211111112567999999999999999999998752 1       111223444322111


Q ss_pred             CccCCCCceecCCCchhhhhhhhhhccC--hhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        155 DLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       155 ~~~LP~GPlllsp~~l~~al~REvi~k~--p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                       .++.--.++.+.+.-    ..++...+  |+.|...+ +.+ .. ++  .- ..-+|++..|+.+-+++|+.
T Consensus        81 -~g~~f~~i~~~~~~~----~~~~~~~KP~p~~~~~~~-~~l-~~-~~--~~-~~~VgDs~~Di~~A~~aG~~  142 (181)
T PRK08942         81 -RGGRLDGIYYCPHHP----EDGCDCRKPKPGMLLSIA-ERL-NI-DL--AG-SPMVGDSLRDLQAAAAAGVT  142 (181)
T ss_pred             -cCCccceEEECCCCC----CCCCcCCCCCHHHHHHHH-HHc-CC-Ch--hh-EEEEeCCHHHHHHHHHCCCe
Confidence             233222233332110    01122234  44444333 222 11 11  11 44588999999999999993

>PF15017 AF1Q: Drug resistance and apoptosis regulator

Probab=97.24  E-value=0.0001  Score=63.96  Aligned_cols=33  Identities=27%  Similarity=0.573  Sum_probs=26.4

Q ss_pred             hhhcCCCCCCCCCCCCCCCceecCCCCCCCCCC
Q psy12533        532 VDQMFPSSLEGTSSEDFSQFVYWREPICETLPE  564 (567)
Q Consensus       532 vd~~FP~~~~~~~~~~~~~~~~w~~p~~~~~~~  564 (567)
                      ++..+++........+||+|+|||.|||+|+.+
T Consensus         4 ~~~~~~~~~~~~~~~~f~sF~fWR~PlP~id~~   36 (87)
T PF15017_consen    4 EDWDKPPPQHDPEDEEFNSFLFWRNPLPDIDLE   36 (87)
T ss_pred             ccccCCCccCCcccccccceeeccCCCCCCCHH
Confidence            345666666666788899999999999999764

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.24  E-value=0.00073  Score=65.23  Aligned_cols=108  Identities=19%  Similarity=0.339  Sum_probs=67.4

Q ss_pred             CCcEEEEecCCccccCCc----cccccccccccccc---hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC
Q psy12533         82 NDKIVISDIDGTITKSDV----LGHVLPIMGKDWAQ---NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE  154 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~----lG~il~~lGkDwth---~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~  154 (567)
                      .-|+|++|||||||...+    .|+-+    +.|..   .++    +.++++|+++..+|+|+...   ++..++.    
T Consensus        20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~----~~~~~~d~~~i----~~L~~~Gi~v~I~T~~~~~~---v~~~l~~----   84 (183)
T PRK09484         20 NIRLLICDVDGVFSDGLIYMGNNGEEL----KAFNVRDGYGI----RCLLTSGIEVAIITGRKSKL---VEDRMTT----   84 (183)
T ss_pred             CceEEEEcCCeeeecCEEEEcCCCCEE----EEEeccchHHH----HHHHHCCCEEEEEeCCCcHH---HHHHHHH----
Confidence            478999999999998642    11111    22322   234    44567999999999996644   4667766    


Q ss_pred             CccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        155 DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       155 ~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                       .+++.         +|.+     ...     |.+.+..+...+.-...- ++.+|+..+|+.+-+.+|++
T Consensus        85 -lgl~~---------~f~g-----~~~-----k~~~l~~~~~~~gl~~~e-v~~VGDs~~D~~~a~~aG~~  134 (183)
T PRK09484         85 -LGITH---------LYQG-----QSN-----KLIAFSDLLEKLAIAPEQ-VAYIGDDLIDWPVMEKVGLS  134 (183)
T ss_pred             -cCCce---------eecC-----CCc-----HHHHHHHHHHHhCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence             33431         1111     011     455555555544321222 67899999999999999986

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=97.23  E-value=0.0015  Score=65.37  Aligned_cols=67  Identities=21%  Similarity=0.434  Sum_probs=50.0

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  439 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl  439 (567)
                      +|+||+||||..++          + ...+...+.+++++++|++++.+|||+...   .+..+..     .++. +|++
T Consensus         1 li~~DlDGTLl~~~----------~-~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~---~~~~~~~-----~~~~-~~~I   60 (256)
T TIGR00099         1 LIFIDLDGTLLNDD----------H-TISPSTKEALAKLREKGIKVVLATGRPYKE---VKNILKE-----LGLD-TPFI   60 (256)
T ss_pred             CEEEeCCCCCCCCC----------C-ccCHHHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHH-----cCCC-CCEE
Confidence            48999999999763          1 245678899999999999999999999654   3666666     4443 3677


Q ss_pred             cCCCchh
Q psy12533        440 LNPTSLL  446 (567)
Q Consensus       440 ~spd~l~  446 (567)
                      +...++.
T Consensus        61 ~~NGa~i   67 (256)
T TIGR00099        61 TANGAAV   67 (256)
T ss_pred             EcCCcEE
Confidence            6665543

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=97.22  E-value=0.00078  Score=68.48  Aligned_cols=58  Identities=24%  Similarity=0.275  Sum_probs=46.3

Q ss_pred             eEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      |+|+||+||||..++.         +.+ .-||+.+..++++++|++++++|+|+..-.....+.|..
T Consensus         2 k~i~~D~DGtl~~~~~---------~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~   60 (257)
T TIGR01458         2 KGVLLDISGVLYISDA---------KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR   60 (257)
T ss_pred             CEEEEeCCCeEEeCCC---------cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence            6899999999997742         223 567999999999999999999999987765555555544

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.21  E-value=0.00084  Score=68.17  Aligned_cols=70  Identities=17%  Similarity=0.340  Sum_probs=51.1

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  161 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G  161 (567)
                      ..++|++|+||||+.++.           ...+-..+..++++++|.+|+.+|||+....   +.+++.     .+++.+
T Consensus         6 ~~~lI~~DlDGTLL~~~~-----------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i---~~~~~~-----l~~~~~   66 (271)
T PRK03669          6 DPLLIFTDLDGTLLDSHT-----------YDWQPAAPWLTRLREAQVPVILCSSKTAAEM---LPLQQT-----LGLQGL   66 (271)
T ss_pred             CCeEEEEeCccCCcCCCC-----------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHH-----hCCCCC
Confidence            467899999999997642           1223355778889999999999999998654   667766     445445


Q ss_pred             ceecCCCch
Q psy12533        162 PMLLNPTSL  170 (567)
Q Consensus       162 Plllsp~~l  170 (567)
                      |+++...++
T Consensus        67 ~~I~~NGa~   75 (271)
T PRK03669         67 PLIAENGAV   75 (271)
T ss_pred             cEEEeCCCE
Confidence            777666544

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=97.18  E-value=0.0021  Score=61.20  Aligned_cols=132  Identities=17%  Similarity=0.182  Sum_probs=72.3

Q ss_pred             cEEEEecCCccccCCccccccccccccc-cchhHHHHHHHHHHCCceEEEEccCcc--------cchHHHHHHHHhcccC
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAI--------GQSRVTREYLQSVKQE  154 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDw-th~GVa~Ly~~i~~nGY~ilYLSaRpi--------~~a~~Tr~~L~~~~q~  154 (567)
                      |++.+|.||||++..   ++... ..+| .-+||.++...++++||++.-+|+-+.        ...+..+.++.++-+.
T Consensus         2 ~~~~~D~Dgtl~~~~---~~~~~-~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~   77 (176)
T TIGR00213         2 KAIFLDRDGTINIDH---GYVHE-IDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE   77 (176)
T ss_pred             CEEEEeCCCCEeCCC---CCCCC-HHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH
Confidence            789999999999531   22111 1233 357999999999999999999998763        1123334555442221


Q ss_pred             CccCCCCceecCCCchhhh--hhhhhh--ccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        155 DLTLPEGPMLLNPTSLLNA--FHTEVI--EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       155 ~~~LP~GPlllsp~~l~~a--l~REvi--~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                       .+++.--++.++..-..+  +..+..  .++|+.|+.++     +.+.-...- ...+|++.+|+.+=+++|++.
T Consensus        78 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~-----~~~~~~~~~-~v~VGDs~~Di~aA~~aG~~~  146 (176)
T TIGR00213        78 -RDVDLDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQAR-----KELHIDMAQ-SYMVGDKLEDMQAGVAAKVKT  146 (176)
T ss_pred             -cCCCccEEEECCCCCcccccccCCCCCCCCCHHHHHHHH-----HHcCcChhh-EEEEcCCHHHHHHHHHCCCcE
Confidence             222211122222110000  000112  33444454433     222211112 335899999999999999874

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.16  E-value=0.00099  Score=66.67  Aligned_cols=69  Identities=20%  Similarity=0.389  Sum_probs=51.5

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      -|+|+||+||||..++.  .         -.+-..+..++++++|++|+.+|||+...   ++.+++.     .++ .+|
T Consensus         3 ~kli~~DlDGTLl~~~~--~---------i~~~~~~ai~~~~~~G~~~~iaTGR~~~~---~~~~~~~-----l~~-~~~   62 (272)
T PRK10530          3 YRVIALDLDGTLLTPKK--T---------ILPESLEALARAREAGYKVIIVTGRHHVA---IHPFYQA-----LAL-DTP   62 (272)
T ss_pred             ccEEEEeCCCceECCCC--c---------cCHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHHHHh-----cCC-CCC
Confidence            47899999999997752  1         23446788889999999999999999764   4667766     333 367


Q ss_pred             eecCCCchh
Q psy12533        163 MLLNPTSLL  171 (567)
Q Consensus       163 lllsp~~l~  171 (567)
                      +++....+.
T Consensus        63 ~I~~NGa~i   71 (272)
T PRK10530         63 AICCNGTYL   71 (272)
T ss_pred             EEEcCCcEE
Confidence            777776554

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.15  E-value=0.001  Score=66.85  Aligned_cols=72  Identities=19%  Similarity=0.358  Sum_probs=51.5

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      -|+|++|+||||..++.  .         ..+-..+..++++++|++|+.+|||+...+   +.+++.+.   ...|.+|
T Consensus         3 ~kli~~DlDGTLl~~~~--~---------i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~l~---~~~~~~~   65 (270)
T PRK10513          3 IKLIAIDMDGTLLLPDH--T---------ISPAVKQAIAAARAKGVNVVLTTGRPYAGV---HRYLKELH---MEQPGDY   65 (270)
T ss_pred             eEEEEEecCCcCcCCCC--c---------cCHHHHHHHHHHHHCCCEEEEecCCChHHH---HHHHHHhC---CCCCCCe
Confidence            37899999999998751  1         233467889999999999999999999754   66776621   1123456


Q ss_pred             eecCCCchh
Q psy12533        163 MLLNPTSLL  171 (567)
Q Consensus       163 lllsp~~l~  171 (567)
                      +++....+.
T Consensus        66 ~I~~NGa~i   74 (270)
T PRK10513         66 CITNNGALV   74 (270)
T ss_pred             EEEcCCeEE
Confidence            776665544

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=97.14  E-value=0.0033  Score=63.67  Aligned_cols=97  Identities=7%  Similarity=0.018  Sum_probs=57.0

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  467 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~  467 (567)
                      .|||.++...++++||++.-+|+.+....   +..|+...-  .++..-.++++.+ ..      .-.++|+.|..++ +
T Consensus       103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~~---~~~l~~~~l--~~~~~d~i~~~~~-~~------~~KP~p~~~~~a~-~  169 (267)
T PRK13478        103 IPGVLEVIAALRARGIKIGSTTGYTREMM---DVVVPLAAA--QGYRPDHVVTTDD-VP------AGRPYPWMALKNA-I  169 (267)
T ss_pred             CCCHHHHHHHHHHCCCEEEEEcCCcHHHH---HHHHHHHhh--cCCCceEEEcCCc-CC------CCCCChHHHHHHH-H
Confidence            56899999999999999999998766443   444443211  1221123333322 11      1134556665433 2


Q ss_pred             HHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        468 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       468 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      .+ .+-++ ..  ..-+|++.+|+.+=+++|++.
T Consensus       170 ~l-~~~~~-~e--~l~IGDs~~Di~aA~~aG~~~  199 (267)
T PRK13478        170 EL-GVYDV-AA--CVKVDDTVPGIEEGLNAGMWT  199 (267)
T ss_pred             Hc-CCCCC-cc--eEEEcCcHHHHHHHHHCCCEE
Confidence            21 11011 11  346899999999999999964

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=97.13  E-value=0.00084  Score=65.30  Aligned_cols=64  Identities=19%  Similarity=0.351  Sum_probs=46.3

Q ss_pred             EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec
Q psy12533        361 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL  440 (567)
Q Consensus       361 VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~  440 (567)
                      |+||+||||..++.           -..+-..+..++++++|++|+.+|||+....   +.++..     .++| .|+++
T Consensus         1 i~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~---~~~~~~-----l~~~-~~~i~   60 (225)
T TIGR01482         1 IASDIDGTLTDPNR-----------AINESALEAIRKAESVGIPVVLVTGNSVQFA---RALAKL-----IGTP-DPVIA   60 (225)
T ss_pred             CeEeccCccCCCCc-----------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHH---HHHHHH-----hCCC-CeEEE
Confidence            58999999998751           1345567888999999999999999998766   445555     3333 45665


Q ss_pred             CCCc
Q psy12533        441 NPTS  444 (567)
Q Consensus       441 spd~  444 (567)
                      ...+
T Consensus        61 ~nGa   64 (225)
T TIGR01482        61 ENGG   64 (225)
T ss_pred             ecCc
Confidence            5443

catalyze the same reaction as SPP.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=97.12  E-value=0.0011  Score=67.36  Aligned_cols=62  Identities=24%  Similarity=0.280  Sum_probs=50.9

Q ss_pred             cEEEEecCCccccCCccccccccccccc-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  159 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDw-th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP  159 (567)
                      |+|+||+||||..++.         +.+ .-+|+.+..++++++|++++++|+|+..-.+...+.|..     .++|
T Consensus         2 k~i~~D~DGtl~~~~~---------~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-----~g~~   64 (257)
T TIGR01458         2 KGVLLDISGVLYISDA---------KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-----LGFD   64 (257)
T ss_pred             CEEEEeCCCeEEeCCC---------cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-----cCCC
Confidence            6899999999998752         222 467999999999999999999999998877777777766     5565

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.11  E-value=0.001  Score=64.98  Aligned_cols=68  Identities=22%  Similarity=0.367  Sum_probs=49.2

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  164 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll  164 (567)
                      .|++|+||||+.++.         .. ..+ ..+..++++++|++++.+|+|+....   +.+++.     .+++..|++
T Consensus         1 ~i~~DlDGTLL~~~~---------~~-~~~-~~~~l~~l~~~gi~~~i~TgR~~~~~---~~~~~~-----l~~~~~~~I   61 (221)
T TIGR02463         1 WVFSDLDGTLLDSHS---------YD-WQP-AAPWLTRLQEAGIPVILCTSKTAAEV---EYLQKA-----LGLTGDPYI   61 (221)
T ss_pred             CEEEeCCCCCcCCCC---------CC-cHH-HHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCCCCcEE
Confidence            389999999998752         11 223 56888889999999999999998665   556655     445435777


Q ss_pred             cCCCchh
Q psy12533        165 LNPTSLL  171 (567)
Q Consensus       165 lsp~~l~  171 (567)
                      +...++.
T Consensus        62 ~~NGa~i   68 (221)
T TIGR02463        62 AENGAAI   68 (221)
T ss_pred             EeCCcEE
Confidence            7765543

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=97.10  E-value=0.00087  Score=65.87  Aligned_cols=97  Identities=19%  Similarity=0.186  Sum_probs=60.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhH----
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQE----  460 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~--p~~----  460 (567)
                      ..||+.+++..++++|+++.-+|+-...   .++..|+.     + ++.-.++.+. ..+.  ..++...+  |+.    
T Consensus        75 l~pG~~e~l~~l~~~g~~~~IvS~~~~~---~i~~il~~-----~-~~~~~i~~n~-~~~~--~~~~~~~kp~p~~~~~~  142 (219)
T PRK09552         75 IREGFHEFVQFVKENNIPFYVVSGGMDF---FVYPLLQG-----L-IPKEQIYCNG-SDFS--GEYITITWPHPCDEHCQ  142 (219)
T ss_pred             cCcCHHHHHHHHHHcCCeEEEECCCcHH---HHHHHHHH-----h-CCcCcEEEeE-EEec--CCeeEEeccCCcccccc
Confidence            3679999999999999999999997643   44556655     3 4433333221 1111  00111122  221    


Q ss_pred             -----HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        461 -----FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       461 -----fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                           -|..+++.+..   ....  ...+|+..+|+.|=+++|+.
T Consensus       143 ~~~~~~K~~~l~~~~~---~~~~--~i~iGDs~~Di~aa~~Ag~~  182 (219)
T PRK09552        143 NHCGCCKPSLIRKLSD---TNDF--HIVIGDSITDLEAAKQADKV  182 (219)
T ss_pred             ccCCCchHHHHHHhcc---CCCC--EEEEeCCHHHHHHHHHCCcc
Confidence                 27777777654   1223  35789999999999999993

>PRK10444 UMP phosphatase; Provisional

Probab=97.10  E-value=0.00078  Score=68.45  Aligned_cols=69  Identities=20%  Similarity=0.391  Sum_probs=54.1

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |.|+||+||||..++            -..||+.+.++.++++|.+++++|.|+-...   +.+.+.++.-|..+++.-+
T Consensus         2 ~~v~~DlDGtL~~~~------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~---~~~~~~l~~~G~~~~~~~i   66 (248)
T PRK10444          2 KNVICDIDGVLMHDN------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTG---QDLANRFATAGVDVPDSVF   66 (248)
T ss_pred             cEEEEeCCCceEeCC------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCH---HHHHHHHHHcCCCCCHhhE
Confidence            579999999999874            2478999999999999999999999997665   4455555555666677666


Q ss_pred             ecCC
Q psy12533        439 LLNP  442 (567)
Q Consensus       439 l~sp  442 (567)
                      ++|.
T Consensus        67 ~ts~   70 (248)
T PRK10444         67 YTSA   70 (248)
T ss_pred             ecHH
Confidence            6543

>PF15017 AF1Q: Drug resistance and apoptosis regulator

Probab=97.09  E-value=0.0002  Score=62.19  Aligned_cols=33  Identities=21%  Similarity=0.285  Sum_probs=26.4

Q ss_pred             hhhcCCCCCCCCCCCcccccccccCcCCCcccc
Q psy12533        257 VDQMFPSSLEGTSSEDFTTMAEILNQIPEITDQ  289 (567)
Q Consensus       257 vd~~fP~~~~~~~~~~~~~~~~w~~~~~~~~~~  289 (567)
                      ++..+++........+||+|+|||.|||+|+..
T Consensus         4 ~~~~~~~~~~~~~~~~f~sF~fWR~PlP~id~~   36 (87)
T PF15017_consen    4 EDWDKPPPQHDPEDEEFNSFLFWRNPLPDIDLE   36 (87)
T ss_pred             ccccCCCccCCcccccccceeeccCCCCCCCHH
Confidence            345566666666788899999999999999764

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=97.06  E-value=0.0014  Score=64.45  Aligned_cols=96  Identities=17%  Similarity=0.197  Sum_probs=58.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hH-----
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QE-----  185 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~-----  185 (567)
                      .+|+.+++..++++|+++.-+|+...   ..++..|+.     . ++.-.++.+... +..  ..+...+|  +.     
T Consensus        76 ~pG~~e~l~~l~~~g~~~~IvS~~~~---~~i~~il~~-----~-~~~~~i~~n~~~-~~~--~~~~~~kp~p~~~~~~~  143 (219)
T PRK09552         76 REGFHEFVQFVKENNIPFYVVSGGMD---FFVYPLLQG-----L-IPKEQIYCNGSD-FSG--EYITITWPHPCDEHCQN  143 (219)
T ss_pred             CcCHHHHHHHHHHcCCeEEEECCCcH---HHHHHHHHH-----h-CCcCcEEEeEEE-ecC--CeeEEeccCCccccccc
Confidence            45999999999999999999999653   445566655     3 443333322211 110  01111122  21     


Q ss_pred             ----HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        186 ----FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       186 ----fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                          -|..+++.+...  + ..  ...+|++.+|+.|=+++|+.
T Consensus       144 ~~~~~K~~~l~~~~~~--~-~~--~i~iGDs~~Di~aa~~Ag~~  182 (219)
T PRK09552        144 HCGCCKPSLIRKLSDT--N-DF--HIVIGDSITDLEAAKQADKV  182 (219)
T ss_pred             cCCCchHHHHHHhccC--C-CC--EEEEeCCHHHHHHHHHCCcc
Confidence                267777766432  1 22  45789999999999999983

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=97.05  E-value=0.0034  Score=63.59  Aligned_cols=96  Identities=7%  Similarity=-0.039  Sum_probs=55.4

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      .+||.++...++++||++.-+|+.+...   ++..|+...-  ..+..-.++++.+ ..      ...++|+.|..++  
T Consensus       103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~---~~~~l~~~~l--~~~~~d~i~~~~~-~~------~~KP~p~~~~~a~--  168 (267)
T PRK13478        103 IPGVLEVIAALRARGIKIGSTTGYTREM---MDVVVPLAAA--QGYRPDHVVTTDD-VP------AGRPYPWMALKNA--  168 (267)
T ss_pred             CCCHHHHHHHHHHCCCEEEEEcCCcHHH---HHHHHHHHhh--cCCCceEEEcCCc-CC------CCCCChHHHHHHH--
Confidence            4588899999999999999999866543   3445543211  1221122333322 11      0133444444332  


Q ss_pred             HHHHhCCCC-CCCEEEecCCcccchhhhhhcCCCC
Q psy12533        193 DIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       193 ~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                         ..+.-. .. =..-+|++.+|+.+=+++|++.
T Consensus       169 ---~~l~~~~~~-e~l~IGDs~~Di~aA~~aG~~~  199 (267)
T PRK13478        169 ---IELGVYDVA-ACVKVDDTVPGIEEGLNAGMWT  199 (267)
T ss_pred             ---HHcCCCCCc-ceEEEcCcHHHHHHHHHCCCEE
Confidence               222110 01 1457889999999999999964

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.05  E-value=0.0013  Score=66.80  Aligned_cols=68  Identities=16%  Similarity=0.356  Sum_probs=50.8

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      -|+|++||||||..++.           -..+++.+..++++++|++++-+|+|+....   +..+..     .+++ .|
T Consensus         4 ~kli~~DlDGTLl~~~~-----------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~---~~~~~~-----l~l~-~~   63 (273)
T PRK00192          4 KLLVFTDLDGTLLDHHT-----------YSYEPAKPALKALKEKGIPVIPCTSKTAAEV---EVLRKE-----LGLE-DP   63 (273)
T ss_pred             ceEEEEcCcccCcCCCC-----------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH-----cCCC-CC
Confidence            57899999999998641           2356788999999999999999999987554   555555     4454 35


Q ss_pred             eecCCCch
Q psy12533        438 MLLNPTSL  445 (567)
Q Consensus       438 vl~spd~l  445 (567)
                      +++...++
T Consensus        64 ~i~~nGa~   71 (273)
T PRK00192         64 FIVENGAA   71 (273)
T ss_pred             EEEEcCcE
Confidence            66555544

>PRK08238 hypothetical protein; Validated

Probab=97.01  E-value=0.0031  Score=70.14  Aligned_cols=130  Identities=20%  Similarity=0.245  Sum_probs=84.1

Q ss_pred             CCeEEEEecCCccccCCcccc------------------------------cccccCcCC----cchhHHHHHHHHHHCC
Q psy12533        357 NDKIVISDIDGTITKSDVLGH------------------------------VLPIMGKDW----AQNGVTRLFTKIKENG  402 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~------------------------------~~~~~GkDw----~h~Gva~l~~~i~~nG  402 (567)
                      .....|+|+|||++++|.+--                              +...++-|.    -++|+.++.+..+++|
T Consensus         9 ~~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~~~d~~~lp~~pga~e~L~~lk~~G   88 (479)
T PRK08238          9 RDLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRVDLDVATLPYNEEVLDYLRAERAAG   88 (479)
T ss_pred             CCCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhcCCChhhCCCChhHHHHHHHHHHCC
Confidence            345689999999999998431                              111123332    4689999999999999


Q ss_pred             ceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEE
Q psy12533        403 YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYA  482 (567)
Q Consensus       403 Y~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~a  482 (567)
                      +++.-+|+.+...++...+   .     .++ --.++.+.+.         ...+|+. |.+.+.   +.++.+.  + .
T Consensus        89 ~~v~LaTas~~~~a~~i~~---~-----lGl-Fd~Vigsd~~---------~~~kg~~-K~~~l~---~~l~~~~--~-~  143 (479)
T PRK08238         89 RKLVLATASDERLAQAVAA---H-----LGL-FDGVFASDGT---------TNLKGAA-KAAALV---EAFGERG--F-D  143 (479)
T ss_pred             CEEEEEeCCCHHHHHHHHH---H-----cCC-CCEEEeCCCc---------cccCCch-HHHHHH---HHhCccC--e-e
Confidence            9999999998876654433   3     222 1124433321         1233433 555544   3333322  2 2


Q ss_pred             ecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533        483 GYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  515 (567)
Q Consensus       483 gfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  515 (567)
                      -+||+.+|+.+++.+|    +-+.||++..+..
T Consensus       144 yvGDS~~Dlp~~~~A~----~av~Vn~~~~l~~  172 (479)
T PRK08238        144 YAGNSAADLPVWAAAR----RAIVVGASPGVAR  172 (479)
T ss_pred             EecCCHHHHHHHHhCC----CeEEECCCHHHHH
Confidence            3599999999999999    5579999876643

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=96.99  E-value=0.0014  Score=65.75  Aligned_cols=67  Identities=13%  Similarity=0.273  Sum_probs=50.1

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  439 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl  439 (567)
                      +|++|+||||+.++          +.-.+ ...+..++++++|++++.+|||+....   +.++..     .+++ .|++
T Consensus         1 li~~DlDGTll~~~----------~~~~~-~~~~~i~~l~~~g~~~~~~TgR~~~~~---~~~~~~-----~~~~-~~~I   60 (256)
T TIGR01486         1 WIFTDLDGTLLDPH----------GYDWG-PAKEVLERLQELGIPVIPCTSKTAAEV---EYLRKE-----LGLE-DPFI   60 (256)
T ss_pred             CEEEcCCCCCcCCC----------CcCch-HHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCC-CcEE
Confidence            48999999999875          11122 468899999999999999999998754   666766     5665 5677


Q ss_pred             cCCCchh
Q psy12533        440 LNPTSLL  446 (567)
Q Consensus       440 ~spd~l~  446 (567)
                      +....+.
T Consensus        61 ~~NGa~i   67 (256)
T TIGR01486        61 VENGGAI   67 (256)
T ss_pred             EcCCeEE
Confidence            6665543

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PRK10444 UMP phosphatase; Provisional

Probab=96.95  E-value=0.0014  Score=66.68  Aligned_cols=66  Identities=21%  Similarity=0.381  Sum_probs=49.8

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      |.|+||+||||..++            -..+|+.+..+.++++|.+++++|.|+-.-.....+-|.   .-|..+++.-+
T Consensus         2 ~~v~~DlDGtL~~~~------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~---~~G~~~~~~~i   66 (248)
T PRK10444          2 KNVICDIDGVLMHDN------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFA---TAGVDVPDSVF   66 (248)
T ss_pred             cEEEEeCCCceEeCC------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH---HcCCCCCHhhE
Confidence            579999999999874            236799999999999999999999999766644444444   44444454333


Q ss_pred             e
Q psy12533        164 L  164 (567)
Q Consensus       164 l  164 (567)
                      +
T Consensus        67 ~   67 (248)
T PRK10444         67 Y   67 (248)
T ss_pred             e
Confidence            3

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=96.90  E-value=0.0022  Score=61.49  Aligned_cols=109  Identities=17%  Similarity=0.199  Sum_probs=63.4

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--Cc-eecCCCchhhhhhhhhhccCh-hHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GP-MLLNPTSLLNAFHTEVIEKKP-QEFKI  188 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GP-lllsp~~l~~al~REvi~k~p-~~fKi  188 (567)
                      .+|+.++.+.++++|+++.-+|+.+....   +.+++.     .+++.  |. +....++.+.   -++..... ..-|.
T Consensus        89 ~~~~~~~l~~l~~~g~~v~ivS~s~~~~v---~~~~~~-----lg~~~~~~~~l~~~~~g~~~---g~~~~~~~~g~~K~  157 (202)
T TIGR01490        89 YPEARDLIRWHKAEGHTIVLVSASLTILV---KPLARI-----LGIDNAIGTRLEESEDGIYT---GNIDGNNCKGEGKV  157 (202)
T ss_pred             cHHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHHH-----cCCcceEecceEEcCCCEEe---CCccCCCCCChHHH
Confidence            44777777888899999999999876555   444443     22221  11 1111222211   11110100 13477


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCc
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE  237 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~  237 (567)
                      ..++.+.....-. ..-..+||+..+|+.+-+.+|.+    +.|||+.+
T Consensus       158 ~~l~~~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~----~~v~~~~~  201 (202)
T TIGR01490       158 HALAELLAEEQID-LKDSYAYGDSISDLPLLSLVGHP----YVVNPDKK  201 (202)
T ss_pred             HHHHHHHHHcCCC-HHHcEeeeCCcccHHHHHhCCCc----EEeCCCCC
Confidence            7777766543211 12356799999999999999966    57888754

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=96.87  E-value=0.0028  Score=63.40  Aligned_cols=67  Identities=21%  Similarity=0.422  Sum_probs=49.1

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  164 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll  164 (567)
                      +|+||+||||..++.           ...+...+..++++++|++|+.+|+|+...   .+..+..     .++. +|++
T Consensus         1 li~~DlDGTLl~~~~-----------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~---~~~~~~~-----~~~~-~~~I   60 (256)
T TIGR00099         1 LIFIDLDGTLLNDDH-----------TISPSTKEALAKLREKGIKVVLATGRPYKE---VKNILKE-----LGLD-TPFI   60 (256)
T ss_pred             CEEEeCCCCCCCCCC-----------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHH-----cCCC-CCEE
Confidence            489999999997641           234567889999999999999999999653   4666666     3443 3666


Q ss_pred             cCCCchh
Q psy12533        165 LNPTSLL  171 (567)
Q Consensus       165 lsp~~l~  171 (567)
                      +...++.
T Consensus        61 ~~NGa~i   67 (256)
T TIGR00099        61 TANGAAV   67 (256)
T ss_pred             EcCCcEE
Confidence            6665543

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.86  E-value=0.0027  Score=66.58  Aligned_cols=118  Identities=17%  Similarity=0.290  Sum_probs=70.6

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |+|++|+||||..++.         ..|  +-+.+..++++++|..|+.+|||+..-.   +.+.+.+     ++. .|+
T Consensus         2 KLIftDLDGTLLd~~~---------~~~--~~a~~aL~~Lk~~GI~vVlaTGRt~~ev---~~l~~~L-----gl~-~p~   61 (302)
T PRK12702          2 RLVLSSLDGSLLDLEF---------NSY--GAARQALAALERRSIPLVLYSLRTRAQL---EHLCRQL-----RLE-HPF   61 (302)
T ss_pred             cEEEEeCCCCCcCCCC---------cCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHHh-----CCC-CeE
Confidence            7899999999998742         233  3478889999999999999999987755   4444452     232 244


Q ss_pred             ecCCC-------chhhh-h-hhhhhcc---------ChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        439 LLNPT-------SLLNA-F-HTEVIEK---------KPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       439 l~spd-------~l~~a-l-~rEvi~k---------~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      ++...       ..+.. + ..+....         .|...=...|+.|+.-+   ..+ +-|||+ -++...-+--|++
T Consensus        62 I~eNGA~I~~p~~~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~---~~~-f~gF~d-~t~~ei~~~TGL~  136 (302)
T PRK12702         62 ICEDGSAIYVPEHYFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDS---HLD-LIGFGD-WTASELAAATGIP  136 (302)
T ss_pred             EEeCCcEEEEccccccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHh---CCC-ceehhh-CCHHHHHHHhCcC
Confidence            44332       22100 0 0000000         11122223466666632   234 579999 7777777777887


Q ss_pred             C
Q psy12533        501 L  501 (567)
Q Consensus       501 ~  501 (567)
                      .
T Consensus       137 ~  137 (302)
T PRK12702        137 L  137 (302)
T ss_pred             H
Confidence            5

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=96.84  E-value=0.0015  Score=57.57  Aligned_cols=53  Identities=15%  Similarity=0.318  Sum_probs=39.7

Q ss_pred             EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        361 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       361 VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      |+||+||||-..+            -.=||++++.+.++++|+++++||-.+-.-.....+-|+.
T Consensus         1 ~l~D~dGvl~~g~------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~   53 (101)
T PF13344_consen    1 FLFDLDGVLYNGN------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK   53 (101)
T ss_dssp             EEEESTTTSEETT------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred             CEEeCccEeEeCC------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence            6899999999642            1467999999999999999999999887665444444444

...

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=96.83  E-value=0.0031  Score=62.46  Aligned_cols=111  Identities=10%  Similarity=0.091  Sum_probs=64.6

Q ss_pred             chhHHHHHH-HHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC-hhHHHHHH
Q psy12533        388 QNGVTRLFT-KIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK-PQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~-~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~-p~~fK~~~  465 (567)
                      .|||.++.. +.++.|++++-+||-+...++..-+.+..+     +..  -++.+.  +-..-..++...+ --+=|...
T Consensus        96 ~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~-----~~~--~~i~t~--le~~~gg~~~g~~c~g~~Kv~r  166 (210)
T TIGR01545        96 FPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFI-----HRL--NLIASQ--IERGNGGWVLPLRCLGHEKVAQ  166 (210)
T ss_pred             CccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccc-----ccC--cEEEEE--eEEeCCceEcCccCCChHHHHH
Confidence            578888885 677789999999998877665444332110     000  112111  0000001110110 02336665


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  515 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  515 (567)
                      |+...   +. ....+.+||+..+|.-+...||-|    +.|||+..+++
T Consensus       167 l~~~~---~~-~~~~~~aYsDS~~D~pmL~~a~~~----~~Vnp~~~L~~  208 (210)
T TIGR01545       167 LEQKI---GS-PLKLYSGYSDSKQDNPLLAFCEHR----WRVSKRGELQQ  208 (210)
T ss_pred             HHHHh---CC-ChhheEEecCCcccHHHHHhCCCc----EEECcchHhcc
Confidence            55433   22 233457999999999999999987    69999988864

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=96.82  E-value=0.002  Score=62.58  Aligned_cols=65  Identities=18%  Similarity=0.332  Sum_probs=46.6

Q ss_pred             EEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec
Q psy12533         86 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL  165 (567)
Q Consensus        86 VISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlll  165 (567)
                      |+||+||||..++.           -..+-..+..++++++|++|+.+|+|+....   +.+++.     .++| .|+++
T Consensus         1 i~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~---~~~~~~-----l~~~-~~~i~   60 (225)
T TIGR01482         1 IASDIDGTLTDPNR-----------AINESALEAIRKAESVGIPVVLVTGNSVQFA---RALAKL-----IGTP-DPVIA   60 (225)
T ss_pred             CeEeccCccCCCCc-----------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHH---HHHHHH-----hCCC-CeEEE
Confidence            58999999998752           1234466778889999999999999998765   445555     3333 46766


Q ss_pred             CCCch
Q psy12533        166 NPTSL  170 (567)
Q Consensus       166 sp~~l  170 (567)
                      ...++
T Consensus        61 ~nGa~   65 (225)
T TIGR01482        61 ENGGE   65 (225)
T ss_pred             ecCcE
Confidence            55443

catalyze the same reaction as SPP.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.81  E-value=0.0026  Score=64.73  Aligned_cols=68  Identities=16%  Similarity=0.356  Sum_probs=50.2

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      -|+|++|+||||+.++.           -..+++.+..++++++|++++-+|+|+....   +..++.     .+++ .|
T Consensus         4 ~kli~~DlDGTLl~~~~-----------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~---~~~~~~-----l~l~-~~   63 (273)
T PRK00192          4 KLLVFTDLDGTLLDHHT-----------YSYEPAKPALKALKEKGIPVIPCTSKTAAEV---EVLRKE-----LGLE-DP   63 (273)
T ss_pred             ceEEEEcCcccCcCCCC-----------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH-----cCCC-CC
Confidence            47899999999998642           2345688899999999999999999987554   555655     4454 35


Q ss_pred             eecCCCch
Q psy12533        163 MLLNPTSL  170 (567)
Q Consensus       163 lllsp~~l  170 (567)
                      +++...++
T Consensus        64 ~i~~nGa~   71 (273)
T PRK00192         64 FIVENGAA   71 (273)
T ss_pred             EEEEcCcE
Confidence            66555433

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=96.81  E-value=0.0048  Score=69.37  Aligned_cols=58  Identities=26%  Similarity=0.492  Sum_probs=45.7

Q ss_pred             eCCCeEEEEecCCccccCCcccccccccCcCC--cchhHHHHHHHHHHCCceEEEEccCcc
Q psy12533        355 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSARAI  413 (567)
Q Consensus       355 ~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw--~h~Gva~l~~~i~~nGY~iiYLSaRpi  413 (567)
                      ....||+.||.||||.+..- |..++.--.||  ..+||.++...++++||+|+-+|.-+.
T Consensus       165 ~~~~Kia~fD~DGTLi~t~s-g~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g  224 (526)
T TIGR01663       165 KGQEKIAGFDLDGTIIKTKS-GKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG  224 (526)
T ss_pred             CccCcEEEEECCCCccccCC-CccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence            35679999999999986421 33344444577  489999999999999999999998654

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=96.79  E-value=0.0024  Score=64.13  Aligned_cols=66  Identities=15%  Similarity=0.305  Sum_probs=49.1

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  164 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll  164 (567)
                      +|++|+||||+.++.         +. .. ...+..++++++|++++.+|+|+....   +.+++.     .+++ .|++
T Consensus         1 li~~DlDGTll~~~~---------~~-~~-~~~~~i~~l~~~g~~~~~~TgR~~~~~---~~~~~~-----~~~~-~~~I   60 (256)
T TIGR01486         1 WIFTDLDGTLLDPHG---------YD-WG-PAKEVLERLQELGIPVIPCTSKTAAEV---EYLRKE-----LGLE-DPFI   60 (256)
T ss_pred             CEEEcCCCCCcCCCC---------cC-ch-HHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCC-CcEE
Confidence            489999999998751         11 12 467888999999999999999998754   667766     5565 5677


Q ss_pred             cCCCch
Q psy12533        165 LNPTSL  170 (567)
Q Consensus       165 lsp~~l  170 (567)
                      +...++
T Consensus        61 ~~NGa~   66 (256)
T TIGR01486        61 VENGGA   66 (256)
T ss_pred             EcCCeE
Confidence            666544

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=96.78  E-value=0.0029  Score=63.18  Aligned_cols=51  Identities=16%  Similarity=0.460  Sum_probs=41.1

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      +|+||+||||..++          +  .-+...+..++++++|.+++.+|+|+....   +.++..
T Consensus         1 li~~DlDGTLl~~~----------~--~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~---~~~~~~   51 (225)
T TIGR02461         1 VIFTDLDGTLLPPG----------Y--EPGPAREALEELKDLGFPIVFVSSKTRAEQ---EYYREE   51 (225)
T ss_pred             CEEEeCCCCCcCCC----------C--CchHHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH
Confidence            58999999998752          2  234689999999999999999999998754   566666

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PLN02887 hydrolase family protein

Probab=96.73  E-value=0.0045  Score=70.39  Aligned_cols=63  Identities=16%  Similarity=0.180  Sum_probs=51.1

Q ss_pred             eeEEeeeCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        349 CYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       349 ~~iylw~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      +.+-.+.+.-|+|+||+||||..++-           -..+...+..++++++|++|+..|||+....   +.+++.
T Consensus       299 ~~~~~~~~~iKLIa~DLDGTLLn~d~-----------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i---~~~l~~  361 (580)
T PLN02887        299 GSLRFYKPKFSYIFCDMDGTLLNSKS-----------QISETNAKALKEALSRGVKVVIATGKARPAV---IDILKM  361 (580)
T ss_pred             cchhhhccCccEEEEeCCCCCCCCCC-----------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH
Confidence            45666888899999999999998751           1345678899999999999999999998755   566665

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=96.73  E-value=0.0033  Score=62.28  Aligned_cols=111  Identities=11%  Similarity=0.079  Sum_probs=63.5

Q ss_pred             chhHHHHHH-HHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh-ccChhHHHHHH
Q psy12533        113 QNGVTRLFT-KIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI-EKKPQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~-~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi-~k~p~~fKi~~  190 (567)
                      .|||.++.. .+++.|++++-+||.+...++...+.+..+     +..  -++.+.-..-.  ..++. ..---+=|...
T Consensus        96 ~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~-----~~~--~~i~t~le~~~--gg~~~g~~c~g~~Kv~r  166 (210)
T TIGR01545        96 FPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFI-----HRL--NLIASQIERGN--GGWVLPLRCLGHEKVAQ  166 (210)
T ss_pred             CccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccc-----ccC--cEEEEEeEEeC--CceEcCccCCChHHHHH
Confidence            467777775 567789999999998877665554332110     000  01111100000  00000 00111235555


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceec
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  240 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  240 (567)
                      |+...   .. ....+.+||+..+|..+...||-|    +.|||+..+++
T Consensus       167 l~~~~---~~-~~~~~~aYsDS~~D~pmL~~a~~~----~~Vnp~~~L~~  208 (210)
T TIGR01545       167 LEQKI---GS-PLKLYSGYSDSKQDNPLLAFCEHR----WRVSKRGELQQ  208 (210)
T ss_pred             HHHHh---CC-ChhheEEecCCcccHHHHHhCCCc----EEECcchHhcc
Confidence            55433   22 234467999999999999999977    78999988754

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=96.73  E-value=0.011  Score=63.56  Aligned_cols=136  Identities=18%  Similarity=0.218  Sum_probs=76.6

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccC-cccchHHH-------HHHHH-hcc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSAR-AIGQSRVT-------REYLQ-SVK  427 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaR-pi~qa~~T-------r~~L~-~~~  427 (567)
                      .|++.+|.||||+..-. +++....-.++ ..|||.+++..++++||++.-+|.. .++.....       +.++. -+.
T Consensus         2 ~k~l~lDrDgtl~~~~~-~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~   80 (354)
T PRK05446          2 QKILFIDRDGTLIEEPP-TDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE   80 (354)
T ss_pred             CcEEEEeCCCCccCCCC-ccccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH
Confidence            58999999999998642 34332222233 6889999999999999999999984 22211111       11222 122


Q ss_pred             cCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHhhCCC-CCCCEEEecCCCcccHHhHHHcCCCCCCE
Q psy12533        428 QEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMALFPP-NTQPFYAGYGNKVNDVWSYQAVGIPLSRI  504 (567)
Q Consensus       428 Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~~L~~i~~lf~~-~~~pf~agfGNr~tDv~aY~~vGIp~~rI  504 (567)
                      +  .+++---++++++..    .-+.-.++|  +.+...+     ...+- ....+|  .|++.+|+.+=+++||+.   
T Consensus        81 ~--~gl~fd~i~i~~~~~----sd~~~~rKP~p~~l~~a~-----~~l~v~~~~svm--IGDs~sDi~aAk~aGi~~---  144 (354)
T PRK05446         81 S--QGIKFDEVLICPHFP----EDNCSCRKPKTGLVEEYL-----AEGAIDLANSYV--IGDRETDVQLAENMGIKG---  144 (354)
T ss_pred             H--cCCceeeEEEeCCcC----cccCCCCCCCHHHHHHHH-----HHcCCCcccEEE--EcCCHHHHHHHHHCCCeE---
Confidence            2  444422223332111    011112344  4443322     21211 134444  578999999999999963   


Q ss_pred             EEEcCC
Q psy12533        505 FTINSR  510 (567)
Q Consensus       505 F~In~~  510 (567)
                      +.||+.
T Consensus       145 I~v~~~  150 (354)
T PRK05446        145 IRYARE  150 (354)
T ss_pred             EEEECC
Confidence            345664

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.72  E-value=0.0031  Score=66.20  Aligned_cols=51  Identities=16%  Similarity=0.334  Sum_probs=39.9

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR  145 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr  145 (567)
                      |+|++|+|||+..++.         ..|  +-+.+..++++++|.+|+.+|||+..-....+
T Consensus         2 KLIftDLDGTLLd~~~---------~~~--~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~   52 (302)
T PRK12702          2 RLVLSSLDGSLLDLEF---------NSY--GAARQALAALERRSIPLVLYSLRTRAQLEHLC   52 (302)
T ss_pred             cEEEEeCCCCCcCCCC---------cCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence            7899999999998752         223  33778899999999999999999876543333

>PTZ00174 phosphomannomutase; Provisional

Probab=96.72  E-value=0.0023  Score=64.35  Aligned_cols=54  Identities=24%  Similarity=0.381  Sum_probs=42.3

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHH
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ  424 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~  424 (567)
                      .-|+|+||+||||..++-           -..+...+..++++++|.+++..|||+....   +..|.
T Consensus         4 ~~klia~DlDGTLL~~~~-----------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i---~~~l~   57 (247)
T PTZ00174          4 KKTILLFDVDGTLTKPRN-----------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKI---KEQLG   57 (247)
T ss_pred             CCeEEEEECcCCCcCCCC-----------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHh
Confidence            358999999999998852           1234567889999999999999999987733   55554

>PLN02645 phosphoglycolate phosphatase

Probab=96.70  E-value=0.0033  Score=65.63  Aligned_cols=60  Identities=23%  Similarity=0.352  Sum_probs=46.1

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  431 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~  431 (567)
                      .-++|+|||||||-..+.            .=+|+.+.+++++++|++++++|+|+....   +.+++.+..-|.
T Consensus        27 ~~~~~~~D~DGtl~~~~~------------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~---~~~~~~l~~lGi   86 (311)
T PLN02645         27 SVETFIFDCDGVIWKGDK------------LIEGVPETLDMLRSMGKKLVFVTNNSTKSR---AQYGKKFESLGL   86 (311)
T ss_pred             hCCEEEEeCcCCeEeCCc------------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCH---HHHHHHHHHCCC
Confidence            567899999999987631            237899999999999999999999996655   344444444333

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=96.61  E-value=0.0033  Score=64.35  Aligned_cols=61  Identities=16%  Similarity=0.272  Sum_probs=44.4

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  434 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP  434 (567)
                      ++|+|||||||..++          +  .-+|+.+++++++++|.++.++|+|+..-.   +.+...+..-|....
T Consensus         3 ~~~~~D~DGtl~~~~----------~--~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~---~~~~~~l~~~G~~~~   63 (279)
T TIGR01452         3 QGFIFDCDGVLWLGE----------R--VVPGAPELLDRLARAGKAALFVTNNSTKSR---AEYALKFARLGFNGL   63 (279)
T ss_pred             cEEEEeCCCceEcCC----------e--eCcCHHHHHHHHHHCCCeEEEEeCCCCCCH---HHHHHHHHHcCCCCC
Confidence            689999999998752          1  346899999999999999999999975433   334444444343333

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=96.61  E-value=0.0045  Score=61.83  Aligned_cols=65  Identities=15%  Similarity=0.441  Sum_probs=47.5

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML  164 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll  164 (567)
                      +|+||+||||..++          +  .-+...+..++++++|.+++.+|+|+....   +.+++.     .++.. |++
T Consensus         1 li~~DlDGTLl~~~----------~--~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~---~~~~~~-----lg~~~-~~I   59 (225)
T TIGR02461         1 VIFTDLDGTLLPPG----------Y--EPGPAREALEELKDLGFPIVFVSSKTRAEQ---EYYREE-----LGVEP-PFI   59 (225)
T ss_pred             CEEEeCCCCCcCCC----------C--CchHHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----cCCCC-cEE
Confidence            58999999999753          2  234688999999999999999999988753   566666     44433 556


Q ss_pred             cCCCch
Q psy12533        165 LNPTSL  170 (567)
Q Consensus       165 lsp~~l  170 (567)
                      +...++
T Consensus        60 ~~NGa~   65 (225)
T TIGR02461        60 VENGGA   65 (225)
T ss_pred             EcCCcE
Confidence            554433

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=96.60  E-value=0.013  Score=56.69  Aligned_cols=94  Identities=19%  Similarity=0.278  Sum_probs=55.1

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      .+|+.++...+++.|+++..+|+.+..   ..+..|+.     .+|..- ..+++.+        ++...+|+   -+++
T Consensus        95 ~~g~~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~-----~~l~~~f~~~~~~~--------~~~~~kp~---~~~~  155 (226)
T PRK13222         95 YPGVKETLAALKAAGYPLAVVTNKPTP---FVAPLLEA-----LGIADYFSVVIGGD--------SLPNKKPD---PAPL  155 (226)
T ss_pred             CCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHH-----cCCccCccEEEcCC--------CCCCCCcC---hHHH
Confidence            358888999999999999999997653   33556655     333210 0111111        11122331   2233


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      +.+...+.....- ...+|++.+|+.+=+++|++.
T Consensus       156 ~~~~~~~~~~~~~-~i~igD~~~Di~~a~~~g~~~  189 (226)
T PRK13222        156 LLACEKLGLDPEE-MLFVGDSRNDIQAARAAGCPS  189 (226)
T ss_pred             HHHHHHcCCChhh-eEEECCCHHHHHHHHHCCCcE
Confidence            3333333221222 457999999999999999964

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=96.60  E-value=0.0033  Score=59.89  Aligned_cols=52  Identities=31%  Similarity=0.650  Sum_probs=38.5

Q ss_pred             eEEEEecCCccccCCcccccccccCcCC--cchhHHHHHHHHHHCCceEEEEccC
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSAR  411 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw--~h~Gva~l~~~i~~nGY~iiYLSaR  411 (567)
                      ||..||.||||.+... |..++.=-.||  -+++|.+..++++++||+|+-+|--
T Consensus         1 Kia~fD~DgTLi~~~s-~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ   54 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKS-GKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQ   54 (159)
T ss_dssp             SEEEE-SCTTTEE-ST-STTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred             CEEEEeCCCCccCCCC-CCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence            7899999999887654 33333335677  5789999999999999999999964

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=96.58  E-value=0.0089  Score=57.29  Aligned_cols=99  Identities=21%  Similarity=0.291  Sum_probs=58.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccC--hhHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKK--PQEFKI  188 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP--~GPlllsp~~l~~al~REvi~k~--p~~fKi  188 (567)
                      .+|+.++.+.++++||++.-+|+-+.   ...+..|+.     .+|-  ---++.+.         ++...|  |+.|+.
T Consensus        94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~---~~~~~~l~~-----~gl~~~fd~i~~s~---------~~~~~KP~~~~~~~  156 (198)
T TIGR01428        94 HPDVPAGLRALKERGYRLAILSNGSP---AMLKSLVKH-----AGLDDPFDAVLSAD---------AVRAYKPAPQVYQL  156 (198)
T ss_pred             CCCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----CCChhhhheeEehh---------hcCCCCCCHHHHHH
Confidence            46888999999999999999998654   344555555     3331  11122221         222334  444554


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCc
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE  237 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~  237 (567)
                      .+ +.+ .+ ++ ..  ..-+|++..|+.+=+++|+..   .-|++.|+
T Consensus       157 ~~-~~~-~~-~p-~~--~~~vgD~~~Di~~A~~~G~~~---i~v~r~~~  196 (198)
T TIGR01428       157 AL-EAL-GV-PP-DE--VLFVASNPWDLGGAKKFGFKT---AWVNRPGE  196 (198)
T ss_pred             HH-HHh-CC-Ch-hh--EEEEeCCHHHHHHHHHCCCcE---EEecCCCC
Confidence            44 221 11 11 11  345788899999999999974   34566654

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=96.56  E-value=0.006  Score=56.87  Aligned_cols=99  Identities=17%  Similarity=0.199  Sum_probs=58.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--C-ceecCCCchhhhhhhhhhc-cCh-hHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--G-PMLLNPTSLLNAFHTEVIE-KKP-QEF  461 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--G-Pvl~spd~l~~al~rEvi~-k~p-~~f  461 (567)
                      ..+|+.++++.++++|+++.-+|+....   .++.+++.     ++++.  + .+....++.+.   .+... ..+ ..-
T Consensus        74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~---~i~~~~~~-----~g~~~~~~~~~~~~~~g~~~---g~~~~~~~~~~~~  142 (177)
T TIGR01488        74 LRPGARELISWLKERGIDTVIVSGGFDF---FVEPVAEK-----LGIDDVFANRLEFDDNGLLT---GPIEGQVNPEGEC  142 (177)
T ss_pred             cCcCHHHHHHHHHHCCCEEEEECCCcHH---HHHHHHHH-----cCCchheeeeEEECCCCEEe---CccCCcccCCcch
Confidence            3479999999999999999999997654   44556655     34431  0 01111122111   00101 112 345


Q ss_pred             HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc
Q psy12533        462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV  497 (567)
Q Consensus       462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v  497 (567)
                      |.+.++.++.-.+... .-...||+..+|+.+-+.|
T Consensus       143 K~~~l~~~~~~~~~~~-~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       143 KGKVLKELLEESKITL-KKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHHHHHHHHHHhCCCH-HHEEEEeCCHHHHHHHhcC
Confidence            8888888766432111 2256899999999887653

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=96.54  E-value=0.0076  Score=53.17  Aligned_cols=53  Identities=15%  Similarity=0.318  Sum_probs=40.2

Q ss_pred             EEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         86 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        86 VISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      |++|+||||-..+            -.=||++++.+.++++|.++++||-.+-.-.....+-|+.
T Consensus         1 ~l~D~dGvl~~g~------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~   53 (101)
T PF13344_consen    1 FLFDLDGVLYNGN------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK   53 (101)
T ss_dssp             EEEESTTTSEETT------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred             CEEeCccEeEeCC------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence            6899999999743            1457999999999999999999999877665444555554

...

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=96.53  E-value=0.0092  Score=67.14  Aligned_cols=58  Identities=26%  Similarity=0.496  Sum_probs=45.1

Q ss_pred             cCCCcEEEEecCCccccCCcccccccccccccc--chhHHHHHHHHHHCCceEEEEccCcc
Q psy12533         80 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWA--QNGVTRLFTKIKENGYKLLYLSARAI  138 (567)
Q Consensus        80 ~~~~kiVISDIDGTITkSD~lG~il~~lGkDwt--h~GVa~Ly~~i~~nGY~ilYLSaRpi  138 (567)
                      ....|++.||.||||....- |..++.--.||.  .+||.++...++++||+|+-+|.-+.
T Consensus       165 ~~~~Kia~fD~DGTLi~t~s-g~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g  224 (526)
T TIGR01663       165 KGQEKIAGFDLDGTIIKTKS-GKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG  224 (526)
T ss_pred             CccCcEEEEECCCCccccCC-CccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence            35578999999999986422 333444445774  79999999999999999999998544

Note that the EC number for the kinase function is: 2.7.1.78

>PTZ00174 phosphomannomutase; Provisional

Probab=96.51  E-value=0.0037  Score=62.88  Aligned_cols=47  Identities=23%  Similarity=0.414  Sum_probs=38.3

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG  139 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~  139 (567)
                      .-|+|+||+||||..++-  .         -.+...+..++++++|.+|+.+|||+..
T Consensus         4 ~~klia~DlDGTLL~~~~--~---------is~~~~~ai~~l~~~Gi~~viaTGR~~~   50 (247)
T PTZ00174          4 KKTILLFDVDGTLTKPRN--P---------ITQEMKDTLAKLKSKGFKIGVVGGSDYP   50 (247)
T ss_pred             CCeEEEEECcCCCcCCCC--C---------CCHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence            358999999999998862  1         1234677889999999999999999876

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=96.49  E-value=0.0066  Score=56.58  Aligned_cols=98  Identities=17%  Similarity=0.216  Sum_probs=57.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--C-ceecCCCchhhhhhhhhhc-cCh-hHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--G-PMLLNPTSLLNAFHTEVIE-KKP-QEFK  187 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--G-Plllsp~~l~~al~REvi~-k~p-~~fK  187 (567)
                      .+|+.++.+.++++|+++.-+|+...   ..++.+++.     ++++.  + .+....++.+..   +... ..+ ..-|
T Consensus        75 ~~g~~~~l~~l~~~g~~~~ivS~~~~---~~i~~~~~~-----~g~~~~~~~~~~~~~~g~~~g---~~~~~~~~~~~~K  143 (177)
T TIGR01488        75 RPGARELISWLKERGIDTVIVSGGFD---FFVEPVAEK-----LGIDDVFANRLEFDDNGLLTG---PIEGQVNPEGECK  143 (177)
T ss_pred             CcCHHHHHHHHHHCCCEEEEECCCcH---HHHHHHHHH-----cCCchheeeeEEECCCCEEeC---ccCCcccCCcchH
Confidence            46899999999999999999999654   444556655     33331  0 011111211100   0000 111 2358


Q ss_pred             HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc
Q psy12533        188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV  222 (567)
Q Consensus       188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v  222 (567)
                      .+.++.++...+-. ..-+..||+..+|+.+-+.|
T Consensus       144 ~~~l~~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       144 GKVLKELLEESKIT-LKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHHHHHHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence            88888877653221 12267899999999886643

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=96.49  E-value=0.015  Score=58.14  Aligned_cols=96  Identities=10%  Similarity=0.090  Sum_probs=54.7

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRD  193 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~  193 (567)
                      +||.++...++++||++.-+|+.+....   +..|+.+.-.++ +. -.++.+. ...      .-.++|+.|..++ +.
T Consensus       102 pg~~e~L~~L~~~g~~l~IvT~~~~~~~---~~~l~~~gl~~~-f~-d~ii~~~-~~~------~~KP~p~~~~~a~-~~  168 (253)
T TIGR01422       102 PGVIEVIAYLRARGIKIGSTTGYTREMM---DVVAPEAALQGY-RP-DYNVTTD-DVP------AGRPAPWMALKNA-IE  168 (253)
T ss_pred             CCHHHHHHHHHHCCCeEEEECCCcHHHH---HHHHHHHHhcCC-CC-ceEEccc-cCC------CCCCCHHHHHHHH-HH
Confidence            4888899999999999999999765444   455544211111 11 1233222 111      1133455554332 22


Q ss_pred             HHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        194 IMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       194 i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      + .+-++ ..  ...+|++.+|+.+=+++|+..
T Consensus       169 l-~~~~~-~~--~l~IGDs~~Di~aA~~aGi~~  197 (253)
T TIGR01422       169 L-GVYDV-AA--CVKVGDTVPDIEEGRNAGMWT  197 (253)
T ss_pred             c-CCCCc-hh--eEEECCcHHHHHHHHHCCCeE
Confidence            1 11001 11  456889999999999999964

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=96.49  E-value=0.01  Score=56.92  Aligned_cols=102  Identities=19%  Similarity=0.288  Sum_probs=61.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP--~GPvl~spd~l~~al~rEvi~k~p~~fK~~  464 (567)
                      ..||+.++.+.++++||++.-+|+-+..   ..+..|+.     .+|-  ---++++.+ .      ....++|+.|+..
T Consensus        93 ~~~~~~~~L~~L~~~g~~~~i~Sn~~~~---~~~~~l~~-----~gl~~~fd~i~~s~~-~------~~~KP~~~~~~~~  157 (198)
T TIGR01428        93 PHPDVPAGLRALKERGYRLAILSNGSPA---MLKSLVKH-----AGLDDPFDAVLSADA-V------RAYKPAPQVYQLA  157 (198)
T ss_pred             CCCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHH-----CCChhhhheeEehhh-c------CCCCCCHHHHHHH
Confidence            4579999999999999999999986543   34555554     3331  111222211 1      0123445666665


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE  512 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~  512 (567)
                      + +.+ .+ .+ ..  ..-+|++.+|+.+=+++|+..   .-|++.|+
T Consensus       158 ~-~~~-~~-~p-~~--~~~vgD~~~Di~~A~~~G~~~---i~v~r~~~  196 (198)
T TIGR01428       158 L-EAL-GV-PP-DE--VLFVASNPWDLGGAKKFGFKT---AWVNRPGE  196 (198)
T ss_pred             H-HHh-CC-Ch-hh--EEEEeCCHHHHHHHHHCCCcE---EEecCCCC
Confidence            4 211 11 11 22  235888899999999999974   34576654

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=96.48  E-value=0.01  Score=58.81  Aligned_cols=94  Identities=18%  Similarity=0.293  Sum_probs=55.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      .||+.++...++++|+++..+|+.+...+   +..|..     .++..- .++.+.+..      ....++|+.|...+ 
T Consensus        97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~---~~~l~~-----~~l~~~f~~i~~~~~~------~~~KP~p~~~~~~~-  161 (229)
T PRK13226         97 FDGVEGMLQRLECAGCVWGIVTNKPEYLA---RLILPQ-----LGWEQRCAVLIGGDTL------AERKPHPLPLLVAA-  161 (229)
T ss_pred             CCCHHHHHHHHHHCCCeEEEECCCCHHHH---HHHHHH-----cCchhcccEEEecCcC------CCCCCCHHHHHHHH-
Confidence            56888999999999999999999876433   444544     333210 011111111      01234455555432 


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      +.+. + ++ ..  ..-+|++.+|+.+-+++|+..
T Consensus       162 ~~l~-~-~p-~~--~l~IGDs~~Di~aA~~aG~~~  191 (229)
T PRK13226        162 ERIG-V-AP-TD--CVYVGDDERDILAARAAGMPS  191 (229)
T ss_pred             HHhC-C-Ch-hh--EEEeCCCHHHHHHHHHCCCcE
Confidence            2221 1 11 22  357899999999999999964

>PLN02645 phosphoglycolate phosphatase

Probab=96.47  E-value=0.0057  Score=63.89  Aligned_cols=57  Identities=23%  Similarity=0.319  Sum_probs=44.4

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      .-|+|+||+||||-..+.            .=+|+.+..++++++|++++++|+|+........+-|+.
T Consensus        27 ~~~~~~~D~DGtl~~~~~------------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~   83 (311)
T PLN02645         27 SVETFIFDCDGVIWKGDK------------LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES   83 (311)
T ss_pred             hCCEEEEeCcCCeEeCCc------------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH
Confidence            457899999999987631            236899999999999999999999996665443333333

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=96.46  E-value=0.005  Score=63.06  Aligned_cols=55  Identities=15%  Similarity=0.236  Sum_probs=42.1

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      ++|+|||||||..++          +  .-+|+.+++++++++|.++.++|+|+..-......-|..
T Consensus         3 ~~~~~D~DGtl~~~~----------~--~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~   57 (279)
T TIGR01452         3 QGFIFDCDGVLWLGE----------R--VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR   57 (279)
T ss_pred             cEEEEeCCCceEcCC----------e--eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            689999999998763          1  346799999999999999999999975544333334444

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK08238 hypothetical protein; Validated

Probab=96.45  E-value=0.011  Score=65.97  Aligned_cols=128  Identities=21%  Similarity=0.249  Sum_probs=81.9

Q ss_pred             CcEEEEecCCccccCCccccc--------------c----------------ccccccc----cchhHHHHHHHHHHCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHV--------------L----------------PIMGKDW----AQNGVTRLFTKIKENGY  128 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~i--------------l----------------~~lGkDw----th~GVa~Ly~~i~~nGY  128 (567)
                      .+..|+|+|||++++|.+-..              +                -.++-|-    -++|+.++.++.+++|+
T Consensus        10 ~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~~~d~~~lp~~pga~e~L~~lk~~G~   89 (479)
T PRK08238         10 DLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRVDLDVATLPYNEEVLDYLRAERAAGR   89 (479)
T ss_pred             CCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhcCCChhhCCCChhHHHHHHHHHHCCC
Confidence            347899999999999984310              0                0112221    35799999999999999


Q ss_pred             eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEe
Q psy12533        129 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAG  208 (567)
Q Consensus       129 ~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~ag  208 (567)
                      ++.-+||.+...++...+.+        ++ .-.++.+.+.         ...+|+. |.+.+.   +.++.  ..+ .-
T Consensus        90 ~v~LaTas~~~~a~~i~~~l--------Gl-Fd~Vigsd~~---------~~~kg~~-K~~~l~---~~l~~--~~~-~y  144 (479)
T PRK08238         90 KLVLATASDERLAQAVAAHL--------GL-FDGVFASDGT---------TNLKGAA-KAAALV---EAFGE--RGF-DY  144 (479)
T ss_pred             EEEEEeCCCHHHHHHHHHHc--------CC-CCEEEeCCCc---------cccCCch-HHHHHH---HHhCc--cCe-eE
Confidence            99999998877665443333        22 1124433321         1233332 555544   33443  222 23


Q ss_pred             cCCcccchhhhhhcCCCCCCEEEEcCCCcee
Q psy12533        209 YGNKVNDVWSYQAVGIPLSRIFTINSRGEVK  239 (567)
Q Consensus       209 fGNr~tDv~aY~~vGIp~~rIF~In~~g~~~  239 (567)
                      +||+.+|+.+++.+|    +-+.||++..+.
T Consensus       145 vGDS~~Dlp~~~~A~----~av~Vn~~~~l~  171 (479)
T PRK08238        145 AGNSAADLPVWAAAR----RAIVVGASPGVA  171 (479)
T ss_pred             ecCCHHHHHHHHhCC----CeEEECCCHHHH
Confidence            599999999999999    557999986543

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=96.45  E-value=0.0054  Score=55.94  Aligned_cols=57  Identities=21%  Similarity=0.359  Sum_probs=42.4

Q ss_pred             eEEEEecCCccccCCc--ccccccccCcCCcchhHHHHHHHHHHCCceEEEEccC-cccch
Q psy12533        359 KIVISDIDGTITKSDV--LGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSAR-AIGQS  416 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~--~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaR-pi~qa  416 (567)
                      |++++|+||||+-...  .++ .+.++.+-.-+|+.++.+.++++|+++.-+|++ +...+
T Consensus         1 kli~~DlD~Tl~~~~~~~~~~-~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~   60 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVGE-DPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVA   60 (128)
T ss_pred             CEEEEeCCCCCCCCCcccccC-CcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHH
Confidence            6899999999996642  111 122233346789999999999999999999998 55443

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=96.44  E-value=0.019  Score=61.76  Aligned_cols=135  Identities=20%  Similarity=0.285  Sum_probs=76.7

Q ss_pred             CcEEEEecCCccccCCcccccccc-ccccccchhHHHHHHHHHHCCceEEEEccC-cccchH-----------HHHHHHH
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPI-MGKDWAQNGVTRLFTKIKENGYKLLYLSAR-AIGQSR-----------VTREYLQ  149 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~-lGkDwth~GVa~Ly~~i~~nGY~ilYLSaR-pi~~a~-----------~Tr~~L~  149 (567)
                      .|++.+|.||||+..-. +++... ..+--..+||.++...++++||++.-+|.. .++...           .+..-|+
T Consensus         2 ~k~l~lDrDgtl~~~~~-~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~   80 (354)
T PRK05446          2 QKILFIDRDGTLIEEPP-TDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE   80 (354)
T ss_pred             CcEEEEeCCCCccCCCC-ccccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH
Confidence            57999999999998642 343211 222245679999999999999999999984 222211           2222333


Q ss_pred             hcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCC-CCCEEEecCCcccchhhhhhcCCCCCC
Q psy12533        150 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIPLSR  228 (567)
Q Consensus       150 ~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp~~r  228 (567)
                      .     .+++---++++++...    -+...++|   |.+++..+.....-+ ...+|  .|++.+|+.+=+++||+.  
T Consensus        81 ~-----~gl~fd~i~i~~~~~s----d~~~~rKP---~p~~l~~a~~~l~v~~~~svm--IGDs~sDi~aAk~aGi~~--  144 (354)
T PRK05446         81 S-----QGIKFDEVLICPHFPE----DNCSCRKP---KTGLVEEYLAEGAIDLANSYV--IGDRETDVQLAENMGIKG--  144 (354)
T ss_pred             H-----cCCceeeEEEeCCcCc----ccCCCCCC---CHHHHHHHHHHcCCCcccEEE--EcCCHHHHHHHHHCCCeE--
Confidence            3     4444222333321110    01123345   333333333322211 33444  478899999999999963  


Q ss_pred             EEEEcCC
Q psy12533        229 IFTINSR  235 (567)
Q Consensus       229 IF~In~~  235 (567)
                       +.||+.
T Consensus       145 -I~v~~~  150 (354)
T PRK05446        145 -IRYARE  150 (354)
T ss_pred             -EEEECC
Confidence             345553

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=96.43  E-value=0.0097  Score=55.78  Aligned_cols=101  Identities=14%  Similarity=0.072  Sum_probs=54.0

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC--ceecC-----CCchhhhhhhh--hhccCh
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG--PMLLN-----PTSLLNAFHTE--VIEKKP  458 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G--Pvl~s-----pd~l~~al~rE--vi~k~p  458 (567)
                      .+|+.++++.++++||++..+|+......   +..++.     ++++.=  .++.+     +++.+.....+  +....+
T Consensus        74 ~~g~~~ll~~l~~~g~~~~i~S~~~~~~~---~~~l~~-----~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~  145 (188)
T TIGR01489        74 DPGFKEFIAFIKEHGIDFIVISDGNDFFI---DPVLEG-----IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCP  145 (188)
T ss_pred             CccHHHHHHHHHHcCCcEEEEeCCcHHHH---HHHHHH-----cCChhheeEEeccCceECCCCcEEEecCCCCccCcCC
Confidence            44666777788899999999998755433   344443     233210  12221     12222111111  000111


Q ss_pred             -hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        459 -QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       459 -~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                       -.-|.++++.++.-.+  ..  ...+|+..+|+.|=+++++-
T Consensus       146 ~g~~K~~~~~~~~~~~~--~~--~i~iGD~~~D~~aa~~~d~~  184 (188)
T TIGR01489       146 CGCCKGKVIHKLSEPKY--QH--IIYIGDGVTDVCPAKLSDVV  184 (188)
T ss_pred             CCCCHHHHHHHHHhhcC--ce--EEEECCCcchhchHhcCCcc
Confidence             1237777777766321  22  34678999999998877653

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=96.43  E-value=0.022  Score=56.91  Aligned_cols=97  Identities=10%  Similarity=0.092  Sum_probs=57.0

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  467 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~  467 (567)
                      -||+.++...++++||++.-+|+.+....   +..|+.+.-.++ +.+ .+++ .+...      .-.++|+.|..++ +
T Consensus       101 ~pg~~e~L~~L~~~g~~l~IvT~~~~~~~---~~~l~~~gl~~~-f~d-~ii~-~~~~~------~~KP~p~~~~~a~-~  167 (253)
T TIGR01422       101 IPGVIEVIAYLRARGIKIGSTTGYTREMM---DVVAPEAALQGY-RPD-YNVT-TDDVP------AGRPAPWMALKNA-I  167 (253)
T ss_pred             CCCHHHHHHHHHHCCCeEEEECCCcHHHH---HHHHHHHHhcCC-CCc-eEEc-cccCC------CCCCCHHHHHHHH-H
Confidence            45888999999999999999999875544   455544221111 111 2332 22221      1134556665433 2


Q ss_pred             HHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        468 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       468 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      .+ .+-++ ..  ...+|++.+|+.|=+++|+..
T Consensus       168 ~l-~~~~~-~~--~l~IGDs~~Di~aA~~aGi~~  197 (253)
T TIGR01422       168 EL-GVYDV-AA--CVKVGDTVPDIEEGRNAGMWT  197 (253)
T ss_pred             Hc-CCCCc-hh--eEEECCcHHHHHHHHHCCCeE
Confidence            22 11001 11  347899999999999999964

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=96.42  E-value=0.0084  Score=57.86  Aligned_cols=110  Identities=19%  Similarity=0.314  Sum_probs=68.3

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCC----cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDW----AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  433 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw----~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l  433 (567)
                      -|++||||||++|---+   ++..-|.-+    ++.|.+  .+.++++||++..+|+.+...+   +..|+.     .++
T Consensus         7 i~~~v~d~dGv~tdg~~---~~~~~g~~~~~~~~~D~~~--~~~L~~~Gi~laIiT~k~~~~~---~~~l~~-----lgi   73 (169)
T TIGR02726         7 IKLVILDVDGVMTDGRI---VINDEGIESRNFDIKDGMG--VIVLQLCGIDVAIITSKKSGAV---RHRAEE-----LKI   73 (169)
T ss_pred             CeEEEEeCceeeECCeE---EEcCCCcEEEEEecchHHH--HHHHHHCCCEEEEEECCCcHHH---HHHHHH-----CCC
Confidence            68899999999996421   133344433    333433  3457889999999999876554   666766     444


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        434 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       434 P~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      ..         +|..     +.++|+.++..+     .-+.-...- .+.||+..+|+.+-+.+|+.
T Consensus        74 ~~---------~f~~-----~kpkp~~~~~~~-----~~l~~~~~e-v~~iGD~~nDi~~~~~ag~~  120 (169)
T TIGR02726        74 KR---------FHEG-----IKKKTEPYAQML-----EEMNISDAE-VCYVGDDLVDLSMMKRVGLA  120 (169)
T ss_pred             cE---------EEec-----CCCCHHHHHHHH-----HHcCcCHHH-EEEECCCHHHHHHHHHCCCe
Confidence            41         1111     234565444332     222111122 56899999999999999976

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=96.40  E-value=0.0044  Score=65.56  Aligned_cols=128  Identities=15%  Similarity=0.185  Sum_probs=75.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC---ceecCCCchhhhhhhhhhccChhHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG---PMLLNPTSLLNAFHTEVIEKKPQEFKI  463 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G---Pvl~spd~l~~al~rEvi~k~p~~fK~  463 (567)
                      ..||+.++++.++++||++.-+|+-....++..   ++.     .++...   -+-+....+...+..+++..+|   |.
T Consensus       182 l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l---~~~-----Lgld~~~an~lei~dg~ltg~v~g~iv~~k~---K~  250 (322)
T PRK11133        182 LMPGLTELVLKLQALGWKVAIASGGFTYFADYL---RDK-----LRLDAAVANELEIMDGKLTGNVLGDIVDAQY---KA  250 (322)
T ss_pred             CChhHHHHHHHHHHcCCEEEEEECCcchhHHHH---HHH-----cCCCeEEEeEEEEECCEEEeEecCccCCccc---HH
Confidence            357899999999999999999999876554333   333     233210   0011111111111112223333   77


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhhHHhhh
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLV  532 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~v  532 (567)
                      ++|+.++.-++-...- ..+||+..+|+.+-+.+|+..    ..|++=+++. .+.... ++..|..++
T Consensus       251 ~~L~~la~~lgi~~~q-tIaVGDg~NDl~m~~~AGlgi----A~nAkp~Vk~-~Ad~~i-~~~~l~~~l  312 (322)
T PRK11133        251 DTLTRLAQEYEIPLAQ-TVAIGDGANDLPMIKAAGLGI----AYHAKPKVNE-QAQVTI-RHADLMGVL  312 (322)
T ss_pred             HHHHHHHHHcCCChhh-EEEEECCHHHHHHHHHCCCeE----EeCCCHHHHh-hCCEEe-cCcCHHHHH
Confidence            8888887655421122 468999999999999999854    4588755643 333332 355565554

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=96.37  E-value=0.0021  Score=60.48  Aligned_cols=93  Identities=18%  Similarity=0.236  Sum_probs=56.4

Q ss_pred             hhHH----HHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhh--hhhhhhccChhH--
Q psy12533        114 NGVT----RLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNA--FHTEVIEKKPQE--  185 (567)
Q Consensus       114 ~GVa----~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~a--l~REvi~k~p~~--  185 (567)
                      +|+.    ++.+.++++|++++-+||-+.   ..++..++.     .++|.=.++.+.. .-..  .....+  .+..  
T Consensus        88 ~~~~~~~~e~i~~~~~~~~~v~IvS~~~~---~~i~~~~~~-----~~i~~~~v~~~~~-~~~~~~~~~~~~--~~~~~~  156 (192)
T PF12710_consen   88 PGFIPDAMELIRELKDNGIKVVIVSGSPD---EIIEPIAER-----LGIDDDNVIGNEL-FDNGGGIFTGRI--TGSNCG  156 (192)
T ss_dssp             TTCHTTHHHHHHHHHHTTSEEEEEEEEEH---HHHHHHHHH-----TTSSEGGEEEEEE-ECTTCCEEEEEE--EEEEES
T ss_pred             cCchhhHHHHHHHHHHCCCEEEEECCCcH---HHHHHHHHH-----cCCCceEEEEEee-eecccceeeeeE--CCCCCC
Confidence            5556    999999999999999999654   455666665     6677544444332 1000  000000  1111  


Q ss_pred             HHHHHHHHH---HHhCCCCCCCEEEecCCcccchhhh
Q psy12533        186 FKISCLRDI---MALFPPNTQPFYAGYGNKVNDVWSY  219 (567)
Q Consensus       186 fKi~~L~~i---~~lf~~~~~pf~agfGNr~tDv~aY  219 (567)
                      =|.++++.+   ... +. ...-+.++|+..+|+.+-
T Consensus       157 ~K~~~l~~~~~~~~~-~~-~~~~~~~iGDs~~D~~~l  191 (192)
T PF12710_consen  157 GKAEALKELYIRDEE-DI-DPDRVIAIGDSINDLPML  191 (192)
T ss_dssp             HHHHHHHHHHHHHHH-TH-TCCEEEEEESSGGGHHHH
T ss_pred             cHHHHHHHHHHHhhc-CC-CCCeEEEEECCHHHHHHh
Confidence            388898888   221 11 234478999999998764

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=96.36  E-value=0.0019  Score=60.80  Aligned_cols=94  Identities=18%  Similarity=0.216  Sum_probs=56.9

Q ss_pred             hhHH----HHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhh--hhhhhhccChhH--
Q psy12533        389 NGVT----RLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNA--FHTEVIEKKPQE--  460 (567)
Q Consensus       389 ~Gva----~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~a--l~rEvi~k~p~~--  460 (567)
                      +|+.    ++++.++++|++++-+||-+...   ++..++.     .++|.=.++.+.- .-..  ...+.+.  +..  
T Consensus        88 ~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~---i~~~~~~-----~~i~~~~v~~~~~-~~~~~~~~~~~~~--~~~~~  156 (192)
T PF12710_consen   88 PGFIPDAMELIRELKDNGIKVVIVSGSPDEI---IEPIAER-----LGIDDDNVIGNEL-FDNGGGIFTGRIT--GSNCG  156 (192)
T ss_dssp             TTCHTTHHHHHHHHHHTTSEEEEEEEEEHHH---HHHHHHH-----TTSSEGGEEEEEE-ECTTCCEEEEEEE--EEEES
T ss_pred             cCchhhHHHHHHHHHHCCCEEEEECCCcHHH---HHHHHHH-----cCCCceEEEEEee-eecccceeeeeEC--CCCCC
Confidence            6666    99999999999999999976544   4666665     6777544444332 0000  0000011  111  


Q ss_pred             HHHHHHHHH---HhhCCCCCCCEEEecCCCcccHHhHH
Q psy12533        461 FKISCLRDI---MALFPPNTQPFYAGYGNKVNDVWSYQ  495 (567)
Q Consensus       461 fK~~~L~~i---~~lf~~~~~pf~agfGNr~tDv~aY~  495 (567)
                      =|..+++.+   ... +. ...-..++|+..+|+.+-+
T Consensus       157 ~K~~~l~~~~~~~~~-~~-~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  157 GKAEALKELYIRDEE-DI-DPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHHHHHHHHHHHHHH-TH-TCCEEEEEESSGGGHHHHH
T ss_pred             cHHHHHHHHHHHhhc-CC-CCCeEEEEECCHHHHHHhC
Confidence            388888888   221 11 2334679999999998743

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=96.35  E-value=0.021  Score=54.46  Aligned_cols=116  Identities=21%  Similarity=0.258  Sum_probs=74.7

Q ss_pred             eCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533        355 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  434 (567)
Q Consensus       355 ~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP  434 (567)
                      ..+-++|++|+|||++..+          ..-..+|+.++...++++|+++.-+|+.+.  ...++.+++.     .++.
T Consensus        22 ~~~v~~vv~D~Dgtl~~~~----------~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~--~~~~~~~~~~-----~gl~   84 (170)
T TIGR01668        22 KVGIKGVVLDKDNTLVYPD----------HNEAYPALRDWIEELKAAGRKLLIVSNNAG--EQRAKAVEKA-----LGIP   84 (170)
T ss_pred             HCCCCEEEEecCCccccCC----------CCCcChhHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHHHH-----cCCE
Confidence            4577889999999999663          123578999999999999999999999762  2233444443     2332


Q ss_pred             CCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCCCCEEEEcCC
Q psy12533        435 EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSR  510 (567)
Q Consensus       435 ~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~  510 (567)
                         .+      +   +  ...++|+.|+..+ +.+    .-...- ..-+|++. +|+.+=+++|+..   ..|++.
T Consensus        85 ---~~------~---~--~~KP~p~~~~~~l-~~~----~~~~~~-~l~IGDs~~~Di~aA~~aGi~~---i~v~~g  138 (170)
T TIGR01668        85 ---VL------P---H--AVKPPGCAFRRAH-PEM----GLTSEQ-VAVVGDRLFTDVMGGNRNGSYT---ILVEPL  138 (170)
T ss_pred             ---EE------c---C--CCCCChHHHHHHH-HHc----CCCHHH-EEEECCcchHHHHHHHHcCCeE---EEEccC
Confidence               11      0   0  1234556665433 222    111112 34789997 8999999999953   445554

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=96.35  E-value=0.012  Score=58.33  Aligned_cols=94  Identities=15%  Similarity=0.212  Sum_probs=53.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      .+|+.++...++++|+++..+|+.+...   .+..|+.     .++..- .++.+.+..      ....++|+.|..   
T Consensus        97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~---~~~~l~~-----~~l~~~f~~i~~~~~~------~~~KP~p~~~~~---  159 (229)
T PRK13226         97 FDGVEGMLQRLECAGCVWGIVTNKPEYL---ARLILPQ-----LGWEQRCAVLIGGDTL------AERKPHPLPLLV---  159 (229)
T ss_pred             CCCHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHH-----cCchhcccEEEecCcC------CCCCCCHHHHHH---
Confidence            4588889999999999999999976533   3445544     333210 011111111      011334444443   


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                        +...+.-...- ..-+|++.+|+.+=+++|+..
T Consensus       160 --~~~~l~~~p~~-~l~IGDs~~Di~aA~~aG~~~  191 (229)
T PRK13226        160 --AAERIGVAPTD-CVYVGDDERDILAARAAGMPS  191 (229)
T ss_pred             --HHHHhCCChhh-EEEeCCCHHHHHHHHHCCCcE
Confidence              33222211111 457899999999999999964

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=96.35  E-value=0.0057  Score=58.27  Aligned_cols=51  Identities=31%  Similarity=0.653  Sum_probs=37.8

Q ss_pred             cEEEEecCCccccCCccccccccccccc--cchhHHHHHHHHHHCCceEEEEcc
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSA  135 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDw--th~GVa~Ly~~i~~nGY~ilYLSa  135 (567)
                      ||..||.||||.+... |...+.=-.||  -+++|.+..++++++||+|+-+|-
T Consensus         1 Kia~fD~DgTLi~~~s-~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTN   53 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKS-GKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTN   53 (159)
T ss_dssp             SEEEE-SCTTTEE-ST-STTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE
T ss_pred             CEEEEeCCCCccCCCC-CCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeC
Confidence            6899999999888755 33333334665  577999999999999999999985

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=96.28  E-value=0.0081  Score=54.80  Aligned_cols=57  Identities=21%  Similarity=0.359  Sum_probs=41.8

Q ss_pred             cEEEEecCCccccCCc--cccccccccccccchhHHHHHHHHHHCCceEEEEccC-cccch
Q psy12533         84 KIVISDIDGTITKSDV--LGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSAR-AIGQS  141 (567)
Q Consensus        84 kiVISDIDGTITkSD~--lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaR-pi~~a  141 (567)
                      |++++|+||||+-.+.  ..+ .+.++.+-.-+|+.++.+.++++|+++.-+|++ +...+
T Consensus         1 kli~~DlD~Tl~~~~~~~~~~-~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~   60 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVGE-DPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVA   60 (128)
T ss_pred             CEEEEeCCCCCCCCCcccccC-CcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHH
Confidence            6899999999996642  111 122233345679999999999999999999997 55433

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=96.23  E-value=0.0055  Score=64.83  Aligned_cols=127  Identities=16%  Similarity=0.227  Sum_probs=72.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC---ceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG---PMLLNPTSLLNAFHTEVIEKKPQEFKIS  189 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G---Plllsp~~l~~al~REvi~k~p~~fKi~  189 (567)
                      .+|+.++.+.++++||++.-+|+-....++..++   .     .++...   .+-.....+......++...+   -|.+
T Consensus       183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~---~-----Lgld~~~an~lei~dg~ltg~v~g~iv~~k---~K~~  251 (322)
T PRK11133        183 MPGLTELVLKLQALGWKVAIASGGFTYFADYLRD---K-----LRLDAAVANELEIMDGKLTGNVLGDIVDAQ---YKAD  251 (322)
T ss_pred             ChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHH---H-----cCCCeEEEeEEEEECCEEEeEecCccCCcc---cHHH
Confidence            4588899999999999999999977655443333   3     222210   000111111111111122222   3888


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccccccHHhHHhhh
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLV  257 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~v  257 (567)
                      +|+.+++.+.-... -..++|+..+|+.+-+.+|+..    ..|++=+|+. ..... -++..|..+.
T Consensus       252 ~L~~la~~lgi~~~-qtIaVGDg~NDl~m~~~AGlgi----A~nAkp~Vk~-~Ad~~-i~~~~l~~~l  312 (322)
T PRK11133        252 TLTRLAQEYEIPLA-QTVAIGDGANDLPMIKAAGLGI----AYHAKPKVNE-QAQVT-IRHADLMGVL  312 (322)
T ss_pred             HHHHHHHHcCCChh-hEEEEECCHHHHHHHHHCCCeE----EeCCCHHHHh-hCCEE-ecCcCHHHHH
Confidence            88888876542111 2678999999999999999854    3487755533 23222 2355555544

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=96.23  E-value=0.0076  Score=60.41  Aligned_cols=55  Identities=20%  Similarity=0.325  Sum_probs=41.4

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      +|++|+|||++.++-        +..-.-+..-++.++++++|-+|+.+|||+....   +.+++.
T Consensus         3 li~tDlDGTLl~~~~--------~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~---~~~~~~   57 (249)
T TIGR01485         3 LLVSDLDNTLVDHTD--------GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSY---KELQKQ   57 (249)
T ss_pred             EEEEcCCCcCcCCCC--------CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHH---HHHHhc
Confidence            799999999997531        1222345677888888999999999999998765   555554

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=96.19  E-value=0.011  Score=59.78  Aligned_cols=69  Identities=16%  Similarity=0.248  Sum_probs=46.7

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      +.|+||+||||..++          +  .-+|+.+..++++++|.+++++|+.+.-........|+.   -|...+..=+
T Consensus         2 ~~~~~D~DGtl~~~~----------~--~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~---~g~~~~~~~i   66 (249)
T TIGR01457         2 KGYLIDLDGTMYKGK----------E--RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS---FDIPATLETV   66 (249)
T ss_pred             CEEEEeCCCceEcCC----------e--eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH---cCCCCChhhE
Confidence            679999999999773          1  235899999999999999999996443333334555554   2333333335


Q ss_pred             ecCC
Q psy12533        439 LLNP  442 (567)
Q Consensus       439 l~sp  442 (567)
                      +++.
T Consensus        67 it~~   70 (249)
T TIGR01457        67 FTAS   70 (249)
T ss_pred             eeHH
Confidence            5543

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.18  E-value=0.0087  Score=57.62  Aligned_cols=47  Identities=17%  Similarity=0.422  Sum_probs=38.9

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  416 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa  416 (567)
                      +|++|+||||+.++.          --..+.+.+...+++++|.+++.+|||+....
T Consensus         1 li~~D~DgTL~~~~~----------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~   47 (204)
T TIGR01484         1 LLFFDLDGTLLDPNA----------HELSPETIEALERLREAGVKVVLVTGRSLAEI   47 (204)
T ss_pred             CEEEeCcCCCcCCCC----------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence            489999999998641          12457888999999999999999999997655

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=96.17  E-value=0.0082  Score=60.16  Aligned_cols=56  Identities=20%  Similarity=0.307  Sum_probs=42.5

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      -+|++|+|||+..++-        +..-.-+..-++.++++++|-+|+.+|||+....   +..+..
T Consensus         2 ~li~tDlDGTLl~~~~--------~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~---~~~~~~   57 (249)
T TIGR01485         2 LLLVSDLDNTLVDHTD--------GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSY---KELQKQ   57 (249)
T ss_pred             eEEEEcCCCcCcCCCC--------CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHH---HHHHhc
Confidence            3799999999997531        1222446778888899999999999999998766   555544

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=96.16  E-value=0.03  Score=53.44  Aligned_cols=116  Identities=20%  Similarity=0.222  Sum_probs=73.1

Q ss_pred             cCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533         80 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  159 (567)
Q Consensus        80 ~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP  159 (567)
                      ..+-++|++|+|||++..+.          .-..+|+.++...++++|+++.-+|..+.  ....+.+++.     .++.
T Consensus        22 ~~~v~~vv~D~Dgtl~~~~~----------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~--~~~~~~~~~~-----~gl~   84 (170)
T TIGR01668        22 KVGIKGVVLDKDNTLVYPDH----------NEAYPALRDWIEELKAAGRKLLIVSNNAG--EQRAKAVEKA-----LGIP   84 (170)
T ss_pred             HCCCCEEEEecCCccccCCC----------CCcChhHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHHHH-----cCCE
Confidence            35678999999999996631          23467999999999999999999999762  1233444444     2232


Q ss_pred             CCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCCCCEEEEcCC
Q psy12533        160 EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSR  235 (567)
Q Consensus       160 ~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~  235 (567)
                         .+      +.     ....+|+.|+..+     ..+.-...- ..-+|++. +|+.+=+++|+..   ..|++.
T Consensus        85 ---~~------~~-----~~KP~p~~~~~~l-----~~~~~~~~~-~l~IGDs~~~Di~aA~~aGi~~---i~v~~g  138 (170)
T TIGR01668        85 ---VL------PH-----AVKPPGCAFRRAH-----PEMGLTSEQ-VAVVGDRLFTDVMGGNRNGSYT---ILVEPL  138 (170)
T ss_pred             ---EE------cC-----CCCCChHHHHHHH-----HHcCCCHHH-EEEECCcchHHHHHHHHcCCeE---EEEccC
Confidence               01      00     1233455454433     222111111 45678987 8999999999953   445554

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=96.12  E-value=0.014  Score=59.10  Aligned_cols=55  Identities=18%  Similarity=0.283  Sum_probs=42.3

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      |.|+||+||||..++.            .-+|+.+..++++++|.+++++|..+--..+.....|+.
T Consensus         2 ~~~~~D~DGtl~~~~~------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~   56 (249)
T TIGR01457         2 KGYLIDLDGTMYKGKE------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS   56 (249)
T ss_pred             CEEEEeCCCceEcCCe------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            6899999999997741            234789999999999999999996443333445666666

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=96.11  E-value=0.024  Score=55.67  Aligned_cols=93  Identities=16%  Similarity=0.179  Sum_probs=57.9

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC-----CCchhhhhhhhhhccChhH-
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN-----PTSLLNAFHTEVIEKKPQE-  185 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPllls-----p~~l~~al~REvi~k~p~~-  185 (567)
                      ..+|+.++...++++|+++.-+|+...   .....+|+.+     . +.-++..+     .+.+.      .....|+. 
T Consensus        71 l~pg~~e~l~~l~~~g~~~~IvS~~~~---~~i~~il~~~-----~-~~~~i~~n~~~~~~~~~~------~~~p~~~~~  135 (214)
T TIGR03333        71 IREGFREFVAFINEHGIPFYVISGGMD---FFVYPLLEGI-----V-EKDRIYCNEADFSNEYIH------IDWPHPCDG  135 (214)
T ss_pred             ccccHHHHHHHHHHCCCeEEEECCCcH---HHHHHHHHhh-----C-CcccEEeceeEeeCCeeE------EeCCCCCcc
Confidence            345888999999999999999999743   3445555542     1 11233222     22211      01122333 


Q ss_pred             --------HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533        186 --------FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  224 (567)
Q Consensus       186 --------fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  224 (567)
                              .|..+++.++..  .  .. ...+|+..+|+.+=+.+|+
T Consensus       136 ~~~~~cg~~K~~~l~~~~~~--~--~~-~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       136 TCQNQCGCCKPSLIRKLSEP--N--DY-HIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             ccccCCCCCHHHHHHHHhhc--C--Cc-EEEEeCCHHHHHHHHhCCe
Confidence                    388888887752  1  22 4578999999999888887

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=96.10  E-value=0.01  Score=59.11  Aligned_cols=116  Identities=20%  Similarity=0.203  Sum_probs=78.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh-hHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP-QEFKISC  465 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p-~~fK~~~  465 (567)
                      ..||+.++...++++|++++-+||-+....+...+-|.-      ..=-+-.+...|+.   |...++-..- ..-|...
T Consensus        78 l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~------d~~~an~l~~~dG~---ltG~v~g~~~~~~~K~~~  148 (212)
T COG0560          78 LTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI------DYVVANELEIDDGK---LTGRVVGPICDGEGKAKA  148 (212)
T ss_pred             CCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCC------chheeeEEEEeCCE---EeceeeeeecCcchHHHH
Confidence            467999999999999999999999998877666665532      00012222223321   1122221111 2458888


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccc
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE  516 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~  516 (567)
                      |+++....+-... =..+||+..+|.-+-+.+|.+    +.+||++++...
T Consensus       149 l~~~~~~~g~~~~-~~~a~gDs~nDlpml~~ag~~----ia~n~~~~l~~~  194 (212)
T COG0560         149 LRELAAELGIPLE-ETVAYGDSANDLPMLEAAGLP----IAVNPKPKLRAL  194 (212)
T ss_pred             HHHHHHHcCCCHH-HeEEEcCchhhHHHHHhCCCC----eEeCcCHHHHHH
Confidence            8888875543211 256999999999999999998    489999888654

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=96.08  E-value=0.018  Score=56.47  Aligned_cols=93  Identities=16%  Similarity=0.199  Sum_probs=58.6

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec-----CCCchhhhhhhhhhccChhH-
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL-----NPTSLLNAFHTEVIEKKPQE-  460 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~-----spd~l~~al~rEvi~k~p~~-  460 (567)
                      ..||+.+++..++++|+++.-+|+...   .....+|+.     +.+ .-++..     ..+.+.      ...+.|+. 
T Consensus        71 l~pg~~e~l~~l~~~g~~~~IvS~~~~---~~i~~il~~-----~~~-~~~i~~n~~~~~~~~~~------~~~p~~~~~  135 (214)
T TIGR03333        71 IREGFREFVAFINEHGIPFYVISGGMD---FFVYPLLEG-----IVE-KDRIYCNEADFSNEYIH------IDWPHPCDG  135 (214)
T ss_pred             ccccHHHHHHHHHHCCCeEEEECCCcH---HHHHHHHHh-----hCC-cccEEeceeEeeCCeeE------EeCCCCCcc
Confidence            457888999999999999999999744   334455554     211 123322     222211      11123333 


Q ss_pred             --------HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        461 --------FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       461 --------fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                              .|..+++.++.   . ... ...+|+..+|+.+=+.+|+
T Consensus       136 ~~~~~cg~~K~~~l~~~~~---~-~~~-~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       136 TCQNQCGCCKPSLIRKLSE---P-NDY-HIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             ccccCCCCCHHHHHHHHhh---c-CCc-EEEEeCCHHHHHHHHhCCe
Confidence                    38888888775   1 222 3578999999999998887

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=96.06  E-value=0.016  Score=55.96  Aligned_cols=111  Identities=19%  Similarity=0.345  Sum_probs=66.1

Q ss_pred             CcEEEEecCCccccCCcccccccccccc----ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKD----WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  158 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkD----wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L  158 (567)
                      -|++||||||++|.--.   ++..-|.-    -++.|.+  .+.++++|+++..+|+.+...   ++..|+.     .++
T Consensus         7 i~~~v~d~dGv~tdg~~---~~~~~g~~~~~~~~~D~~~--~~~L~~~Gi~laIiT~k~~~~---~~~~l~~-----lgi   73 (169)
T TIGR02726         7 IKLVILDVDGVMTDGRI---VINDEGIESRNFDIKDGMG--VIVLQLCGIDVAIITSKKSGA---VRHRAEE-----LKI   73 (169)
T ss_pred             CeEEEEeCceeeECCeE---EEcCCCcEEEEEecchHHH--HHHHHHCCCEEEEEECCCcHH---HHHHHHH-----CCC
Confidence            68899999999996421   12222322    1233333  344678999999999986654   4666766     444


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      .         .+|.+     +..+|+.++     .+...+.-...- .+.||+..+|+.+-+.+|++-
T Consensus        74 ~---------~~f~~-----~kpkp~~~~-----~~~~~l~~~~~e-v~~iGD~~nDi~~~~~ag~~~  121 (169)
T TIGR02726        74 K---------RFHEG-----IKKKTEPYA-----QMLEEMNISDAE-VCYVGDDLVDLSMMKRVGLAV  121 (169)
T ss_pred             c---------EEEec-----CCCCHHHHH-----HHHHHcCcCHHH-EEEECCCHHHHHHHHHCCCeE
Confidence            3         12211     234454333     333322211112 678999999999999999763

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=96.05  E-value=0.023  Score=58.22  Aligned_cols=93  Identities=13%  Similarity=0.171  Sum_probs=53.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      .+|+.++.+.++++||++.-+|+.+...   .+..|..     .++..  ..++. .+..-      ...++|+.|+..+
T Consensus       103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~---~~~~l~~-----~~i~~~f~~i~~-~d~~~------~~Kp~p~~~~~~~  167 (272)
T PRK13223        103 YPGVRDTLKWLKKQGVEMALITNKPERF---VAPLLDQ-----MKIGRYFRWIIG-GDTLP------QKKPDPAALLFVM  167 (272)
T ss_pred             CCCHHHHHHHHHHCCCeEEEEECCcHHH---HHHHHHH-----cCcHhhCeEEEe-cCCCC------CCCCCcHHHHHHH
Confidence            5788999999999999999999976532   2333333     22211  11222 22110      0123334444433


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                       +.+ .+   ...- ...+|++.+|+.+=+++|+..
T Consensus       168 -~~~-g~---~~~~-~l~IGD~~~Di~aA~~aGi~~  197 (272)
T PRK13223        168 -KMA-GV---PPSQ-SLFVGDSRSDVLAAKAAGVQC  197 (272)
T ss_pred             -HHh-CC---ChhH-EEEECCCHHHHHHHHHCCCeE
Confidence             211 11   1112 347999999999999999974

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=96.04  E-value=0.03  Score=53.72  Aligned_cols=25  Identities=20%  Similarity=0.267  Sum_probs=18.8

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCc
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARA  137 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRp  137 (567)
                      .+|+.++.+.++++||++.-+|+-+
T Consensus       107 ~~g~~~~l~~L~~~g~~~~i~Sn~~  131 (203)
T TIGR02252       107 YPDAIKLLKDLRERGLILGVISNFD  131 (203)
T ss_pred             CcCHHHHHHHHHHCCCEEEEEeCCc
Confidence            3577777788888888888888754

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PLN02887 hydrolase family protein

Probab=96.02  E-value=0.0073  Score=68.71  Aligned_cols=64  Identities=16%  Similarity=0.203  Sum_probs=50.4

Q ss_pred             eeEEEEecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         73 KCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        73 ~~~iylw~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      ++.+-.+.+.-|+|+||+||||..++-  .         ..+...+..++++++|++|+.+|||+...+   +.+++.
T Consensus       298 ~~~~~~~~~~iKLIa~DLDGTLLn~d~--~---------Is~~t~eAI~kl~ekGi~~vIATGR~~~~i---~~~l~~  361 (580)
T PLN02887        298 EGSLRFYKPKFSYIFCDMDGTLLNSKS--Q---------ISETNAKALKEALSRGVKVVIATGKARPAV---IDILKM  361 (580)
T ss_pred             hcchhhhccCccEEEEeCCCCCCCCCC--c---------cCHHHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH
Confidence            355666788899999999999998752  1         234567889999999999999999998755   556655

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=96.01  E-value=0.025  Score=53.01  Aligned_cols=100  Identities=15%  Similarity=0.098  Sum_probs=53.2

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC--ceecCC-----Cchhhhhhhh--hhccChh
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG--PMLLNP-----TSLLNAFHTE--VIEKKPQ  184 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G--Plllsp-----~~l~~al~RE--vi~k~p~  184 (567)
                      +|+.++.+.++++|+++..+|+.....   .+..++.     .+++.=  .++.++     ++.+.....+  +....+.
T Consensus        75 ~g~~~ll~~l~~~g~~~~i~S~~~~~~---~~~~l~~-----~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~  146 (188)
T TIGR01489        75 PGFKEFIAFIKEHGIDFIVISDGNDFF---IDPVLEG-----IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPC  146 (188)
T ss_pred             ccHHHHHHHHHHcCCcEEEEeCCcHHH---HHHHHHH-----cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCC
Confidence            366677788888999999999865433   3444443     222210  122221     1111111000  0001111


Q ss_pred             -HHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        185 -EFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       185 -~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                       .-|.++++.++...+  ..  ...+|+..+|+.|=+++++-
T Consensus       147 g~~K~~~~~~~~~~~~--~~--~i~iGD~~~D~~aa~~~d~~  184 (188)
T TIGR01489       147 GCCKGKVIHKLSEPKY--QH--IIYIGDGVTDVCPAKLSDVV  184 (188)
T ss_pred             CCCHHHHHHHHHhhcC--ce--EEEECCCcchhchHhcCCcc
Confidence             147778888776532  12  45668999999998777653

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.01  E-value=0.012  Score=56.66  Aligned_cols=47  Identities=17%  Similarity=0.422  Sum_probs=38.3

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  141 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a  141 (567)
                      +|++|+||||+.++.          --..+.+.+..++++++|.+++.+|||+....
T Consensus         1 li~~D~DgTL~~~~~----------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~   47 (204)
T TIGR01484         1 LLFFDLDGTLLDPNA----------HELSPETIEALERLREAGVKVVLVTGRSLAEI   47 (204)
T ss_pred             CEEEeCcCCCcCCCC----------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence            489999999998642          11346788999999999999999999997654

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK06769 hypothetical protein; Validated

Probab=95.98  E-value=0.043  Score=52.56  Aligned_cols=124  Identities=17%  Similarity=0.156  Sum_probs=70.9

Q ss_pred             CeEEEEecCCccccCCcccccccccCc-CC-cchhHHHHHHHHHHCCceEEEEccCcccchH--HHHHHHHhcccCCccC
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGK-DW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSR--VTREYLQSVKQEDLTL  433 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~Gk-Dw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~--~Tr~~L~~~~Q~~~~l  433 (567)
                      -|++++|-||||-     ||-. .... ++ .-|||.+++..++++||++.-+|.-+..+..  ..+.++..+..  .++
T Consensus         4 ~~~~~~d~d~~~~-----~~~~-~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~--~g~   75 (173)
T PRK06769          4 IQAIFIDRDGTIG-----GDTT-IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG--FGF   75 (173)
T ss_pred             CcEEEEeCCCccc-----CCCC-CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh--CCc
Confidence            4789999999994     2211 1121 23 5789999999999999999999987532210  01122222222  444


Q ss_pred             CCCceecCCCchhhhhhhhh--hccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        434 PEGPMLLNPTSLLNAFHTEV--IEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       434 P~GPvl~spd~l~~al~rEv--i~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      ..  ++.+....    ..++  -.++|+.|+..+ +.+..  .+ ...  .-+|++.+|+.+=+++|+..
T Consensus        76 ~~--~~~~~~~~----~~~~~~~KP~p~~~~~~~-~~l~~--~p-~~~--i~IGD~~~Di~aA~~aGi~~  133 (173)
T PRK06769         76 DD--IYLCPHKH----GDGCECRKPSTGMLLQAA-EKHGL--DL-TQC--AVIGDRWTDIVAAAKVNATT  133 (173)
T ss_pred             CE--EEECcCCC----CCCCCCCCCCHHHHHHHH-HHcCC--CH-HHe--EEEcCCHHHHHHHHHCCCeE
Confidence            32  22221100    0111  244567777554 22211  11 233  35678899999999999963

>TIGR01684 viral_ppase viral phosphatase

Probab=95.90  E-value=0.022  Score=59.91  Aligned_cols=67  Identities=16%  Similarity=0.193  Sum_probs=49.0

Q ss_pred             EeeeCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533        352 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  431 (567)
Q Consensus       352 ylw~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~  431 (567)
                      ++|.. .++|+||+||||..+.-..+        -..||+.++...++++|+++.-.|+++...+   ...|+.     .
T Consensus       121 ~~~~~-~kvIvFDLDgTLi~~~~~v~--------irdPgV~EaL~~LkekGikLaIaTS~~Re~v---~~~L~~-----l  183 (301)
T TIGR01684       121 KVFEP-PHVVVFDLDSTLITDEEPVR--------IRDPRIYDSLTELKKRGCILVLWSYGDRDHV---VESMRK-----V  183 (301)
T ss_pred             ccccc-ceEEEEecCCCCcCCCCccc--------cCCHHHHHHHHHHHHCCCEEEEEECCCHHHH---HHHHHH-----c
Confidence            44543 56999999999998742111        1258999999999999999999998765544   356666     6


Q ss_pred             cCCC
Q psy12533        432 TLPE  435 (567)
Q Consensus       432 ~lP~  435 (567)
                      +|..
T Consensus       184 GLd~  187 (301)
T TIGR01684       184 KLDR  187 (301)
T ss_pred             CCCc
Confidence            6653

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=95.90  E-value=0.021  Score=56.69  Aligned_cols=91  Identities=10%  Similarity=0.066  Sum_probs=53.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhh--ccChhHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVI--EKKPQEFKI  188 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi--~k~p~~fKi  188 (567)
                      .+|+.++...++++||++.-+|+-+..   ..+..|+.     .+|-+  --++.+.         ++.  .++|+.|..
T Consensus        95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~---~~~~~l~~-----~~l~~~fd~iv~s~---------~~~~~KP~p~~~~~  157 (224)
T PRK14988         95 REDTVPFLEALKASGKRRILLTNAHPH---NLAVKLEH-----TGLDAHLDLLLSTH---------TFGYPKEDQRLWQA  157 (224)
T ss_pred             CCCHHHHHHHHHhCCCeEEEEeCcCHH---HHHHHHHH-----CCcHHHCCEEEEee---------eCCCCCCCHHHHHH
Confidence            369999999999999999999985433   33444443     22210  1122222         122  334455555


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      .+ +.+ .+ ++  .- ...+|++..|+.+=+++|+..
T Consensus       158 ~~-~~~-~~-~p--~~-~l~igDs~~di~aA~~aG~~~  189 (224)
T PRK14988        158 VA-EHT-GL-KA--ER-TLFIDDSEPILDAAAQFGIRY  189 (224)
T ss_pred             HH-HHc-CC-Ch--HH-EEEEcCCHHHHHHHHHcCCeE
Confidence            44 111 11 11  11 456899999999999999975

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=95.84  E-value=0.046  Score=52.47  Aligned_cols=92  Identities=17%  Similarity=0.171  Sum_probs=51.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP--~GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      .||+.++.+.++++||++.-+|+-+..    .+..|+.     .++.  --.++.+.+ .      ....++|+.|...+
T Consensus       107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~----~~~~l~~-----~~l~~~fd~i~~s~~-~------~~~KP~~~~~~~~~  170 (203)
T TIGR02252       107 YPDAIKLLKDLRERGLILGVISNFDSR----LRGLLEA-----LGLLEYFDFVVTSYE-V------GAEKPDPKIFQEAL  170 (203)
T ss_pred             CcCHHHHHHHHHHCCCEEEEEeCCchh----HHHHHHH-----CCcHHhcceEEeecc-c------CCCCCCHHHHHHHH
Confidence            578888888899999998888875432    2444544     2321  112332221 1      01133445555443


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL  501 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~  501 (567)
                       +.+    +-...- ..-+|++. +|+.+=+++|+..
T Consensus       171 -~~~----~~~~~~-~~~IgD~~~~Di~~A~~aG~~~  201 (203)
T TIGR02252       171 -ERA----GISPEE-ALHIGDSLRNDYQGARAAGWRA  201 (203)
T ss_pred             -HHc----CCChhH-EEEECCCchHHHHHHHHcCCee
Confidence             222    111111 34688886 7999999999863

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=95.83  E-value=0.018  Score=57.28  Aligned_cols=93  Identities=10%  Similarity=0.066  Sum_probs=55.0

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      .+|+.++...++++||++.-+|+-+...   .+..|+.     .+|-+  --++++. ..-      ...++|+.|...+
T Consensus        95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~---~~~~l~~-----~~l~~~fd~iv~s~-~~~------~~KP~p~~~~~~~  159 (224)
T PRK14988         95 REDTVPFLEALKASGKRRILLTNAHPHN---LAVKLEH-----TGLDAHLDLLLSTH-TFG------YPKEDQRLWQAVA  159 (224)
T ss_pred             CCCHHHHHHHHHhCCCeEEEEeCcCHHH---HHHHHHH-----CCcHHHCCEEEEee-eCC------CCCCCHHHHHHHH
Confidence            4799999999999999999999854333   3444443     22210  1122221 110      1134456666554


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      =+ + .+ ++ ..  ...+|++..|+.+=+++|+..
T Consensus       160 ~~-~-~~-~p-~~--~l~igDs~~di~aA~~aG~~~  189 (224)
T PRK14988        160 EH-T-GL-KA-ER--TLFIDDSEPILDAAAQFGIRY  189 (224)
T ss_pred             HH-c-CC-Ch-HH--EEEEcCCHHHHHHHHHcCCeE
Confidence            11 1 11 11 12  346899999999999999975

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=95.76  E-value=0.022  Score=65.77  Aligned_cols=54  Identities=24%  Similarity=0.404  Sum_probs=41.6

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      .|+|++|+||||+.++.         ..  .+-..+..++++++|++|+-+|||+....   +.+++.
T Consensus       416 ~KLIfsDLDGTLLd~d~---------~i--~~~t~eAL~~L~ekGI~~VIATGRs~~~i---~~l~~~  469 (694)
T PRK14502        416 KKIVYTDLDGTLLNPLT---------YS--YSTALDALRLLKDKELPLVFCSAKTMGEQ---DLYRNE  469 (694)
T ss_pred             eeEEEEECcCCCcCCCC---------cc--CHHHHHHHHHHHHcCCeEEEEeCCCHHHH---HHHHHH
Confidence            47899999999998752         12  22357889999999999999999998765   444444

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=95.76  E-value=0.023  Score=52.05  Aligned_cols=87  Identities=17%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh-ccChhHHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI-EKKPQEFKISCLR  192 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi-~k~p~~fKi~~L~  192 (567)
                      +|+.++...++++|+++.-+|+++...+....+.+  +.    .... .++++.+         +. .++|+.|...|  
T Consensus        67 ~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~----~~f~-~i~~~~~---------~~~Kp~~~~~~~~~--  128 (154)
T TIGR01549        67 RGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LG----DYFD-LILGSDE---------FGAKPEPEIFLAAL--  128 (154)
T ss_pred             cCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HH----hcCc-EEEecCC---------CCCCcCHHHHHHHH--
Confidence            69999999999999999999998877665544442  11    1111 2333332         11 22333343333  


Q ss_pred             HHHHhCCCCCCCEEEecCCcccchhhhhhcC
Q psy12533        193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVG  223 (567)
Q Consensus       193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vG  223 (567)
                         ..+.-.. . ..-+|++..|+.+=+++|
T Consensus       129 ---~~~~~~~-~-~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       129 ---ESLGLPP-E-VLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             ---HHcCCCC-C-EEEEeCCHHHHHHHHHcc
Confidence               3332212 2 456888899998887776

HAD subfamilies caused by an overly broad single model.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=95.75  E-value=0.027  Score=58.23  Aligned_cols=94  Identities=16%  Similarity=0.224  Sum_probs=51.7

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKP--QEFKIS  189 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~p--~~fKi~  189 (567)
                      .|||.++...++++||++.-+|+.+....   ...|+..  .+..+..+ .++ ..+        ++...+|  +.|...
T Consensus       146 ~pGv~elL~~L~~~g~~l~IvTn~~~~~~---~~~l~~~--~~~~~~~~~~~v-~~~--------~~~~~KP~p~~~~~a  211 (286)
T PLN02779        146 RPGVLRLMDEALAAGIKVAVCSTSNEKAV---SKIVNTL--LGPERAQGLDVF-AGD--------DVPKKKPDPDIYNLA  211 (286)
T ss_pred             hhhHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHHh--ccccccCceEEE-ecc--------ccCCCCCCHHHHHHH
Confidence            34888888889999999999999654333   3333331  00112211 122 111        2223344  344443


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      +     ..+.-...- ...+|++.+|+.+=+++|++.
T Consensus       212 ~-----~~~~~~p~~-~l~IGDs~~Di~aA~~aG~~~  242 (286)
T PLN02779        212 A-----ETLGVDPSR-CVVVEDSVIGLQAAKAAGMRC  242 (286)
T ss_pred             H-----HHhCcChHH-EEEEeCCHHhHHHHHHcCCEE
Confidence            3     222111111 445889999999999999864

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=95.73  E-value=0.03  Score=57.89  Aligned_cols=94  Identities=15%  Similarity=0.245  Sum_probs=53.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhh--ccChhHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVI--EKKPQEFKIS  464 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi--~k~p~~fK~~  464 (567)
                      .||+.++...++++||++.-+|+.+....   ...|...  .+..+..+ .++ ..+        ++.  .+.|+.|...
T Consensus       146 ~pGv~elL~~L~~~g~~l~IvTn~~~~~~---~~~l~~~--~~~~~~~~~~~v-~~~--------~~~~~KP~p~~~~~a  211 (286)
T PLN02779        146 RPGVLRLMDEALAAGIKVAVCSTSNEKAV---SKIVNTL--LGPERAQGLDVF-AGD--------DVPKKKPDPDIYNLA  211 (286)
T ss_pred             hhhHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHHh--ccccccCceEEE-ecc--------ccCCCCCCHHHHHHH
Confidence            46888899999999999999999654333   3333331  00112211 112 111        122  3344566554


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      + +.+. + .+ ..  ..-+|++.+|+.|=+++|++.
T Consensus       212 ~-~~~~-~-~p-~~--~l~IGDs~~Di~aA~~aG~~~  242 (286)
T PLN02779        212 A-ETLG-V-DP-SR--CVVVEDSVIGLQAAKAAGMRC  242 (286)
T ss_pred             H-HHhC-c-Ch-HH--EEEEeCCHHhHHHHHHcCCEE
Confidence            3 2111 1 11 12  345899999999999999973

>PRK06769 hypothetical protein; Validated

Probab=95.64  E-value=0.065  Score=51.30  Aligned_cols=122  Identities=17%  Similarity=0.131  Sum_probs=68.9

Q ss_pred             CCcEEEEecCCccccCCccccccccccc-cc-cchhHHHHHHHHHHCCceEEEEccCcccch-----HHHHHHHHhcccC
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGK-DW-AQNGVTRLFTKIKENGYKLLYLSARAIGQS-----RVTREYLQSVKQE  154 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGk-Dw-th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a-----~~Tr~~L~~~~q~  154 (567)
                      +-|++++|.||||-.-  .+    .... ++ .-+||.++...++++||++.-+|+.+-.+.     ..+..-|+.    
T Consensus         3 ~~~~~~~d~d~~~~~~--~~----~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~----   72 (173)
T PRK06769          3 NIQAIFIDRDGTIGGD--TT----IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG----   72 (173)
T ss_pred             CCcEEEEeCCCcccCC--CC----CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh----
Confidence            3478999999999422  11    1111 22 457999999999999999999998653211     111222333    


Q ss_pred             CccCCCCceecCCCchhhhhhhhh--hccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        155 DLTLPEGPMLLNPTSLLNAFHTEV--IEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       155 ~~~LP~GPlllsp~~l~~al~REv--i~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                       .++..  ++.+....    ..++  -.++|+.|+..+ +.+ .+ .+ ..  ..-+|++.+|+.+=+++|+..
T Consensus        73 -~g~~~--~~~~~~~~----~~~~~~~KP~p~~~~~~~-~~l-~~-~p-~~--~i~IGD~~~Di~aA~~aGi~~  133 (173)
T PRK06769         73 -FGFDD--IYLCPHKH----GDGCECRKPSTGMLLQAA-EKH-GL-DL-TQ--CAVIGDRWTDIVAAAKVNATT  133 (173)
T ss_pred             -CCcCE--EEECcCCC----CCCCCCCCCCHHHHHHHH-HHc-CC-CH-HH--eEEEcCCHHHHHHHHHCCCeE
Confidence             33432  22221100    0011  234555566444 222 11 11 22  334678899999999999964

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=95.61  E-value=0.037  Score=58.28  Aligned_cols=120  Identities=18%  Similarity=0.198  Sum_probs=72.3

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-  436 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-  436 (567)
                      .++|+||+||||..++--.+        -..||+.++...++++|+++.-+|+.+...+   +..|..     .+++.= 
T Consensus       128 ~~~i~~D~D~TL~~~~~~v~--------irdp~V~EtL~eLkekGikLaIvTNg~Re~v---~~~Le~-----lgL~~yF  191 (303)
T PHA03398        128 PHVIVFDLDSTLITDEEPVR--------IRDPFVYDSLDELKERGCVLVLWSYGNREHV---VHSLKE-----TKLEGYF  191 (303)
T ss_pred             ccEEEEecCCCccCCCCccc--------cCChhHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHH-----cCCCccc
Confidence            58999999999998842111        1248999999999999999999997654444   666766     666531 


Q ss_pred             -ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCC------CcccHHhHHH-cCCCCCCEEE
Q psy12533        437 -PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGN------KVNDVWSYQA-VGIPLSRIFT  506 (567)
Q Consensus       437 -Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGN------r~tDv~aY~~-vGIp~~rIF~  506 (567)
                       .++++.+....+-.||..+.+-   |        ..|  ...|||.-...      .++.|.-|.+ .||.--+.+|
T Consensus       192 DvII~~g~i~~k~~~~~~~d~~~---~--------~~~--~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiT  256 (303)
T PHA03398        192 DIIICGGRKAGEYSRRVIVDNKY---K--------MVF--VKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTIT  256 (303)
T ss_pred             cEEEECCCcccccccceeecccc---e--------eEE--ecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEE
Confidence             3555554444343333333311   1        111  13467765542      2445555544 4666555444

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=95.54  E-value=0.034  Score=54.96  Aligned_cols=123  Identities=15%  Similarity=0.179  Sum_probs=75.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC-----CCchhhhhhhhhhccChhHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN-----PTSLLNAFHTEVIEKKPQEF  461 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~s-----pd~l~~al~rEvi~k~p~~f  461 (567)
                      ..||+.++.+.++++| +++-+|+-...   .++..++.     .+++.  ++.+     .++.+   ..+.+..+  .-
T Consensus        69 l~pga~ell~~lk~~~-~~~IVS~~~~~---~~~~il~~-----lgi~~--~~an~l~~~~~g~~---tG~~~~~~--~~  132 (203)
T TIGR02137        69 PLEGAVEFVDWLRERF-QVVILSDTFYE---FSQPLMRQ-----LGFPT--LLCHKLEIDDSDRV---VGYQLRQK--DP  132 (203)
T ss_pred             CCccHHHHHHHHHhCC-eEEEEeCChHH---HHHHHHHH-----cCCch--hhceeeEEecCCee---ECeeecCc--ch
Confidence            5789999999999985 99999996554   44555555     44542  2211     10111   11122211  24


Q ss_pred             HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccc-cccccHhhHHhhhhh
Q psy12533        462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQ-TFQSTYSNMSYLVDQ  534 (567)
Q Consensus       462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~-~~~~sY~~l~~~vd~  534 (567)
                      |..+++.++..    ... ..+||+..||+.+.+.+|++.    .++++-.+.....+ ...++|..|-+..+.
T Consensus       133 K~~~l~~l~~~----~~~-~v~vGDs~nDl~ml~~Ag~~i----a~~ak~~~~~~~~~~~~~~~~~~~~~~~~~  197 (203)
T TIGR02137       133 KRQSVIAFKSL----YYR-VIAAGDSYNDTTMLSEAHAGI----LFHAPENVIREFPQFPAVHTYEDLKREFLK  197 (203)
T ss_pred             HHHHHHHHHhh----CCC-EEEEeCCHHHHHHHHhCCCCE----EecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence            77777777652    223 568999999999999999884    45665444332221 245778777766553

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=95.50  E-value=0.041  Score=56.39  Aligned_cols=91  Identities=14%  Similarity=0.192  Sum_probs=52.0

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKP--QEFKI  188 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p--~~fKi  188 (567)
                      .+|+.++.+.++++|+++.-+|+.+...   .+..|..     .++..  ..++.+. .        +-.++|  +.|+.
T Consensus       103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~---~~~~l~~-----~~i~~~f~~i~~~d-~--------~~~~Kp~p~~~~~  165 (272)
T PRK13223        103 YPGVRDTLKWLKKQGVEMALITNKPERF---VAPLLDQ-----MKIGRYFRWIIGGD-T--------LPQKKPDPAALLF  165 (272)
T ss_pred             CCCHHHHHHHHHHCCCeEEEEECCcHHH---HHHHHHH-----cCcHhhCeEEEecC-C--------CCCCCCCcHHHHH
Confidence            4688889999999999999999876532   2333333     12211  1122221 1        112344  33333


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      .+     ..+.-...- ...+|++.+|+.+=+++|+..
T Consensus       166 ~~-----~~~g~~~~~-~l~IGD~~~Di~aA~~aGi~~  197 (272)
T PRK13223        166 VM-----KMAGVPPSQ-SLFVGDSRSDVLAAKAAGVQC  197 (272)
T ss_pred             HH-----HHhCCChhH-EEEECCCHHHHHHHHHCCCeE
Confidence            32     222111112 457999999999999999974

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=95.49  E-value=0.011  Score=59.94  Aligned_cols=55  Identities=22%  Similarity=0.472  Sum_probs=37.9

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHH---HCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIK---ENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  434 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~---~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP  434 (567)
                      .++++||+|||++..              ...+...|..-++   ..+-.++|+|+|...+.   ++-+..     .++|
T Consensus         2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~---~~~~~~-----~~l~   59 (247)
T PF05116_consen    2 PRLLASDLDGTLIDG--------------DDEALARLEELLEQQARPEILFVYVTGRSLESV---LRLLRE-----YNLP   59 (247)
T ss_dssp             SEEEEEETBTTTBHC--------------HHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHH---HHHHHH-----CT-E
T ss_pred             CEEEEEECCCCCcCC--------------CHHHHHHHHHHHHHhhCCCceEEEECCCCHHHH---HHHHHh-----CCCC
Confidence            468999999999922              1345666666666   78999999999999887   454555     5565

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=95.46  E-value=0.025  Score=58.38  Aligned_cols=91  Identities=19%  Similarity=0.176  Sum_probs=51.7

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      .|||.++...++++|+++.-+|+......   ...|+.     ++|.+= -.+.+.         +...++|+.+     
T Consensus       144 ~pg~~e~L~~L~~~gi~laIvSn~~~~~~---~~~L~~-----~gl~~~F~~vi~~---------~~~~~k~~~~-----  201 (273)
T PRK13225        144 FPGVADLLAQLRSRSLCLGILSSNSRQNI---EAFLQR-----QGLRSLFSVVQAG---------TPILSKRRAL-----  201 (273)
T ss_pred             CCCHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHH-----cCChhheEEEEec---------CCCCCCHHHH-----
Confidence            46888888889999999998888754333   444544     333110 001111         1112234333     


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      ..+...+.-...- ..-+|++..|+.+=+++|+..
T Consensus       202 ~~~l~~~~~~p~~-~l~IGDs~~Di~aA~~AG~~~  235 (273)
T PRK13225        202 SQLVAREGWQPAA-VMYVGDETRDVEAARQVGLIA  235 (273)
T ss_pred             HHHHHHhCcChhH-EEEECCCHHHHHHHHHCCCeE
Confidence            2322222211112 357899999999999999964

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=95.37  E-value=0.21  Score=49.94  Aligned_cols=108  Identities=15%  Similarity=0.216  Sum_probs=64.8

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  436 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G  436 (567)
                      .-++|+||+|||+-...            ..-||+.++.++++++|+++..+|..+...+.. ...|..     .+++.+
T Consensus         7 ~~~~~~~D~dG~l~~~~------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~-~~~L~~-----~gl~~~   68 (242)
T TIGR01459         7 DYDVFLLDLWGVIIDGN------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSL-HKTLKS-----LGINAD   68 (242)
T ss_pred             cCCEEEEecccccccCC------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHH-HHHHHH-----CCCCcc
Confidence            45689999999998652            135799999999999999999999976543322 244555     566531


Q ss_pred             --ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        437 --PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       437 --Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                        ..+++++..                -.+.|..+..-++... .-...+|++..|+.....+|.
T Consensus        69 ~~~~Ii~s~~~----------------~~~~l~~~~~~~~~~~-~~~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        69 LPEMIISSGEI----------------AVQMILESKKRFDIRN-GIIYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             ccceEEccHHH----------------HHHHHHhhhhhccCCC-ceEEEeCCcccchhhhcCCCc
Confidence              222223211                1123333322121111 113467887778887766665

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=95.36  E-value=0.035  Score=50.84  Aligned_cols=88  Identities=17%  Similarity=0.256  Sum_probs=53.1

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHH
Q psy12533        389 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRD  468 (567)
Q Consensus       389 ~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~  468 (567)
                      +|+.+++..++++|+++.-+|+++...+....+.+  +.+    ... .++++.+ .      . -.++|+.|...|   
T Consensus        67 ~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~~----~f~-~i~~~~~-~------~-~Kp~~~~~~~~~---  128 (154)
T TIGR01549        67 RGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LGD----YFD-LILGSDE-F------G-AKPEPEIFLAAL---  128 (154)
T ss_pred             cCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HHh----cCc-EEEecCC-C------C-CCcCHHHHHHHH---
Confidence            79999999999999999999998876665444432  111    111 2333332 1      0 123445554444   


Q ss_pred             HHhhCCCCCCCEEEecCCCcccHHhHHHcC
Q psy12533        469 IMALFPPNTQPFYAGYGNKVNDVWSYQAVG  498 (567)
Q Consensus       469 i~~lf~~~~~pf~agfGNr~tDv~aY~~vG  498 (567)
                        .-+.....  ..-+|++..|+.+=+++|
T Consensus       129 --~~~~~~~~--~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       129 --ESLGLPPE--VLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             --HHcCCCCC--EEEEeCCHHHHHHHHHcc
Confidence              22221122  346899999999988876

HAD subfamilies caused by an overly broad single model.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=95.35  E-value=0.015  Score=57.60  Aligned_cols=63  Identities=19%  Similarity=0.384  Sum_probs=43.6

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc--
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP--  437 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP--  437 (567)
                      +|++|+|||+..++          ++.+.  ..++.+ .+++|.+++.+|||+....   +.++..     .+++ +|  
T Consensus         1 li~~DlDgTLl~~~----------~~~~~--~~~~~~-~~~~gi~~viaTGR~~~~v---~~~~~~-----l~l~-~~~~   58 (236)
T TIGR02471         1 LIITDLDNTLLGDD----------EGLAS--FVELLR-GSGDAVGFGIATGRSVESA---KSRYAK-----LNLP-SPDV   58 (236)
T ss_pred             CeEEeccccccCCH----------HHHHH--HHHHHH-hcCCCceEEEEeCCCHHHH---HHHHHh-----CCCC-CCCE
Confidence            48899999999764          22211  225666 5899999999999998877   777766     4443 34  


Q ss_pred             eecCCCc
Q psy12533        438 MLLNPTS  444 (567)
Q Consensus       438 vl~spd~  444 (567)
                      +++....
T Consensus        59 ~I~~nGa   65 (236)
T TIGR02471        59 LIARVGT   65 (236)
T ss_pred             EEECCCc
Confidence            6655544

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=95.25  E-value=0.13  Score=50.67  Aligned_cols=130  Identities=21%  Similarity=0.317  Sum_probs=84.0

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEcc-----Ccc----cchHHHHHHHHhcc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSA-----RAI----GQSRVTREYLQSVK  427 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSa-----Rpi----~qa~~Tr~~L~~~~  427 (567)
                      ..|++..|=||||-.--- + +...+-+=+-.+|+.+...++++.||+++-+|-     |..    .....+..-++.++
T Consensus         4 ~~k~lflDRDGtin~d~~-~-yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~   81 (181)
T COG0241           4 DQKALFLDRDGTINIDKG-D-YVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILA   81 (181)
T ss_pred             CCcEEEEcCCCceecCCC-c-ccCcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHH
Confidence            368999999999987521 1 222222223799999999999999999999997     321    12222333445677


Q ss_pred             cCCccCCCCceecCCCchhhhhhhh--hhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        428 QEDLTLPEGPMLLNPTSLLNAFHTE--VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       428 Q~~~~lP~GPvl~spd~l~~al~rE--vi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      ++|..|. +-++ .|.      +.|  ---++|   |..++.+...=+.-+-.- -.-.|+|.+|+.+=.++||.
T Consensus        82 ~~gv~id-~i~~-Cph------~p~~~c~cRKP---~~gm~~~~~~~~~iD~~~-s~~VGD~~~Dlq~a~n~gi~  144 (181)
T COG0241          82 SQGVKID-GILY-CPH------HPEDNCDCRKP---KPGMLLSALKEYNIDLSR-SYVVGDRLTDLQAAENAGIK  144 (181)
T ss_pred             HcCCccc-eEEE-CCC------CCCCCCcccCC---ChHHHHHHHHHhCCCccc-eEEecCcHHHHHHHHHCCCC
Confidence            7777664 3333 342      222  134677   777766665544322222 23679999999999999999

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=95.20  E-value=0.1  Score=50.80  Aligned_cols=132  Identities=15%  Similarity=0.171  Sum_probs=70.6

Q ss_pred             CeEEEEecCCccccCCc----ccccc----------cccCcC-CcchhHHHHHHHHHHCCceEEEEccC-cccchHHHHH
Q psy12533        358 DKIVISDIDGTITKSDV----LGHVL----------PIMGKD-WAQNGVTRLFTKIKENGYKLLYLSAR-AIGQSRVTRE  421 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~----~G~~~----------~~~GkD-w~h~Gva~l~~~i~~nGY~iiYLSaR-pi~qa~~Tr~  421 (567)
                      .|+||||.|+|+..--.    .+.+-          -..+.. -..+||.++...++++||++.-+|+. +...   .+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~---~~~   78 (174)
T TIGR01685         2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEW---AYE   78 (174)
T ss_pred             CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHH---HHH
Confidence            58999999999875322    11111          112222 25789999999999999999999987 5443   344


Q ss_pred             HHHhcc--cCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCC--CCCCCEEEecCCCcccHHhHHHc
Q psy12533        422 YLQSVK--QEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFP--PNTQPFYAGYGNKVNDVWSYQAV  497 (567)
Q Consensus       422 ~L~~~~--Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~--~~~~pf~agfGNr~tDv~aY~~v  497 (567)
                      .|..+.  ..|...|.=..   -+....+  .++..++|  . ..+++.+...++  -...- ..-+|++..|+.+=+++
T Consensus        79 ~L~~~~l~~~~~~~~~~~~---Fd~iv~~--~~~~~~kp--~-~~i~~~~~~~~~~gl~p~e-~l~VgDs~~di~aA~~a  149 (174)
T TIGR01685        79 ILGTFEITYAGKTVPMHSL---FDDRIEI--YKPNKAKQ--L-EMILQKVNKVDPSVLKPAQ-ILFFDDRTDNVREVWGY  149 (174)
T ss_pred             HHHhCCcCCCCCcccHHHh---ceeeeec--cCCchHHH--H-HHHHHHhhhcccCCCCHHH-eEEEcChhHhHHHHHHh
Confidence            454411  11111110000   0111110  11111111  1 122444443321  01112 34689999999999999


Q ss_pred             CCCC
Q psy12533        498 GIPL  501 (567)
Q Consensus       498 GIp~  501 (567)
                      |+..
T Consensus       150 Gi~~  153 (174)
T TIGR01685       150 GVTS  153 (174)
T ss_pred             CCEE
Confidence            9965

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=95.20  E-value=0.036  Score=64.02  Aligned_cols=67  Identities=22%  Similarity=0.430  Sum_probs=47.3

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      .|+|++|+|||++.++.         ..+  +-..+..++++++|++|+-+|||+....   ..+++.     .+++ .|
T Consensus       416 ~KLIfsDLDGTLLd~d~---------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i---~~l~~~-----Lgl~-~~  475 (694)
T PRK14502        416 KKIVYTDLDGTLLNPLT---------YSY--STALDALRLLKDKELPLVFCSAKTMGEQ---DLYRNE-----LGIK-DP  475 (694)
T ss_pred             eeEEEEECcCCCcCCCC---------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHH---HHHHHH-----cCCC-Ce
Confidence            46899999999998753         112  2356788899999999999999997754   455544     3333 35


Q ss_pred             eecCCCc
Q psy12533        163 MLLNPTS  169 (567)
Q Consensus       163 lllsp~~  169 (567)
                      +++...+
T Consensus       476 ~I~eNGA  482 (694)
T PRK14502        476 FITENGG  482 (694)
T ss_pred             EEEcCCC
Confidence            6655543

>PLN02940 riboflavin kinase

Probab=95.18  E-value=0.075  Score=57.40  Aligned_cols=130  Identities=11%  Similarity=0.108  Sum_probs=69.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP--~GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      .+|+.++.+.++++|+++.-+|+.+....   +..|..  .  .++-  --.+++ .+...      .-.++|+.|..++
T Consensus        95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~~---~~~l~~--~--~gl~~~Fd~ii~-~d~v~------~~KP~p~~~~~a~  160 (382)
T PLN02940         95 LPGANRLIKHLKSHGVPMALASNSPRANI---EAKISC--H--QGWKESFSVIVG-GDEVE------KGKPSPDIFLEAA  160 (382)
T ss_pred             CcCHHHHHHHHHHCCCcEEEEeCCcHHHH---HHHHHh--c--cChHhhCCEEEe-hhhcC------CCCCCHHHHHHHH
Confidence            47888999999999999999999864433   333331  0  1111  012222 22110      0133456665554


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc-cccccccccHhhHHhhhhhcCCCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH-EMTQTFQSTYSNMSYLVDQMFPSSL  540 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~-~~~~~~~~sY~~l~~~vd~~FP~~~  540 (567)
                       +.+. + ++ ..  ...+|++.+|+.|=+++|++.  |.+-...+.... ........++..|. .++.+|||-.
T Consensus       161 -~~lg-v-~p-~~--~l~VGDs~~Di~aA~~aGi~~--I~v~~g~~~~~~~~~ad~~i~sl~el~-~~~~~~~~~~  227 (382)
T PLN02940        161 -KRLN-V-EP-SN--CLVIEDSLPGVMAGKAAGMEV--IAVPSIPKQTHLYSSADEVINSLLDLQ-PEKWGLPPFN  227 (382)
T ss_pred             -HHcC-C-Ch-hH--EEEEeCCHHHHHHHHHcCCEE--EEECCCCcchhhccCccEEeCCHhHcC-HHHcCCCCcc
Confidence             2221 1 11 22  346899999999999999973  433221111111 11112346666665 3336688755

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=95.15  E-value=0.039  Score=56.91  Aligned_cols=90  Identities=20%  Similarity=0.199  Sum_probs=51.0

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      +||.++...++++|+++.-+|+...   +.+...|+.     .+|..= -.+.+.         +....+|+     .+.
T Consensus       145 pg~~e~L~~L~~~gi~laIvSn~~~---~~~~~~L~~-----~gl~~~F~~vi~~---------~~~~~k~~-----~~~  202 (273)
T PRK13225        145 PGVADLLAQLRSRSLCLGILSSNSR---QNIEAFLQR-----QGLRSLFSVVQAG---------TPILSKRR-----ALS  202 (273)
T ss_pred             CCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----cCChhheEEEEec---------CCCCCCHH-----HHH
Confidence            5888888888889999998888654   333445544     332110 001111         11112333     333


Q ss_pred             HHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      .+...+.-...- ..-+|++..|+.+=+++|+..
T Consensus       203 ~~l~~~~~~p~~-~l~IGDs~~Di~aA~~AG~~~  235 (273)
T PRK13225        203 QLVAREGWQPAA-VMYVGDETRDVEAARQVGLIA  235 (273)
T ss_pred             HHHHHhCcChhH-EEEECCCHHHHHHHHHCCCeE
Confidence            333332211111 457899999999999999964

>TIGR01684 viral_ppase viral phosphatase

Probab=95.13  E-value=0.054  Score=57.02  Aligned_cols=66  Identities=17%  Similarity=0.194  Sum_probs=48.4

Q ss_pred             EEecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533         77 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  156 (567)
Q Consensus        77 ylw~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~  156 (567)
                      ++|.. .++|+||+||||..+.-..+        =..+||.++...++++|+++.-+|+++-..+   ...|+.     .
T Consensus       121 ~~~~~-~kvIvFDLDgTLi~~~~~v~--------irdPgV~EaL~~LkekGikLaIaTS~~Re~v---~~~L~~-----l  183 (301)
T TIGR01684       121 KVFEP-PHVVVFDLDSTLITDEEPVR--------IRDPRIYDSLTELKKRGCILVLWSYGDRDHV---VESMRK-----V  183 (301)
T ss_pred             ccccc-ceEEEEecCCCCcCCCCccc--------cCCHHHHHHHHHHHHCCCEEEEEECCCHHHH---HHHHHH-----c
Confidence            44443 45999999999998742111        1258999999999999999999998755544   456766     6


Q ss_pred             cCC
Q psy12533        157 TLP  159 (567)
Q Consensus       157 ~LP  159 (567)
                      +|.
T Consensus       184 GLd  186 (301)
T TIGR01684       184 KLD  186 (301)
T ss_pred             CCC
Confidence            665

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=95.07  E-value=0.021  Score=56.59  Aligned_cols=63  Identities=19%  Similarity=0.384  Sum_probs=43.5

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc--
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP--  162 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP--  162 (567)
                      +|++|+|||++.++          ++.+.  ..++.+ .+++|.+|+.+|||+....   +.++..     ..++ +|  
T Consensus         1 li~~DlDgTLl~~~----------~~~~~--~~~~~~-~~~~gi~~viaTGR~~~~v---~~~~~~-----l~l~-~~~~   58 (236)
T TIGR02471         1 LIITDLDNTLLGDD----------EGLAS--FVELLR-GSGDAVGFGIATGRSVESA---KSRYAK-----LNLP-SPDV   58 (236)
T ss_pred             CeEEeccccccCCH----------HHHHH--HHHHHH-hcCCCceEEEEeCCCHHHH---HHHHHh-----CCCC-CCCE
Confidence            48899999999764          11211  225555 4888999999999998766   777766     4554 44  


Q ss_pred             eecCCCc
Q psy12533        163 MLLNPTS  169 (567)
Q Consensus       163 lllsp~~  169 (567)
                      +++....
T Consensus        59 ~I~~nGa   65 (236)
T TIGR02471        59 LIARVGT   65 (236)
T ss_pred             EEECCCc
Confidence            6655543

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=95.02  E-value=0.043  Score=56.23  Aligned_cols=53  Identities=17%  Similarity=0.219  Sum_probs=39.8

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHH-CCceEEEEccCcccch
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKE-NGYKLLYLSARAIGQS  416 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~-nGY~iiYLSaRpi~qa  416 (567)
                      ..+|++|+||||+...      +.-..-...+...+..+++++ +|..++.+|||+....
T Consensus        14 ~~li~~D~DGTLl~~~------~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~   67 (266)
T PRK10187         14 NYAWFFDLDGTLAEIK------PHPDQVVVPDNILQGLQLLATANDGALALISGRSMVEL   67 (266)
T ss_pred             CEEEEEecCCCCCCCC------CCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHH
Confidence            4689999999999641      000011345788899999998 8999999999988765

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=94.95  E-value=0.072  Score=56.11  Aligned_cols=76  Identities=14%  Similarity=0.111  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  161 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G  161 (567)
                      -.|+|+||+||||..++--.++        ..+||.++...++++|+++.-+|+.+-..+   +..|..     .+|+.=
T Consensus       127 ~~~~i~~D~D~TL~~~~~~v~i--------rdp~V~EtL~eLkekGikLaIvTNg~Re~v---~~~Le~-----lgL~~y  190 (303)
T PHA03398        127 IPHVIVFDLDSTLITDEEPVRI--------RDPFVYDSLDELKERGCVLVLWSYGNREHV---VHSLKE-----TKLEGY  190 (303)
T ss_pred             eccEEEEecCCCccCCCCcccc--------CChhHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHH-----cCCCcc
Confidence            3479999999999988421111        248999999999999999999997544433   667777     666521


Q ss_pred             --ceecCCCchhhh
Q psy12533        162 --PMLLNPTSLLNA  173 (567)
Q Consensus       162 --Plllsp~~l~~a  173 (567)
                        .++++.+....+
T Consensus       191 FDvII~~g~i~~k~  204 (303)
T PHA03398        191 FDIIICGGRKAGEY  204 (303)
T ss_pred             ccEEEECCCccccc
Confidence              355555444433

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=94.94  E-value=0.46  Score=47.57  Aligned_cols=60  Identities=18%  Similarity=0.289  Sum_probs=45.0

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  159 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP  159 (567)
                      +-++|++|+|||+-...            ..-+|+.++.++++++|+++..+|..+-..+.. ...|+.     .+++
T Consensus         7 ~~~~~~~D~dG~l~~~~------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~-~~~L~~-----~gl~   66 (242)
T TIGR01459         7 DYDVFLLDLWGVIIDGN------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSL-HKTLKS-----LGIN   66 (242)
T ss_pred             cCCEEEEecccccccCC------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHH-HHHHHH-----CCCC
Confidence            45689999999998653            135799999999999999999999976543322 245555     5565

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK09449 dUMP phosphatase; Provisional

Probab=94.91  E-value=0.12  Score=50.26  Aligned_cols=91  Identities=13%  Similarity=0.182  Sum_probs=50.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhh--ccChhHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVI--EKKPQEFKI  463 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi--~k~p~~fK~  463 (567)
                      .||+.++...++ +||++.-+|..+.   ..++..|+.     .++..  -.++++-         ++.  .++|+.|..
T Consensus        97 ~~g~~~~L~~L~-~~~~~~i~Tn~~~---~~~~~~l~~-----~~l~~~fd~v~~~~---------~~~~~KP~p~~~~~  158 (224)
T PRK09449         97 LPGAVELLNALR-GKVKMGIITNGFT---ELQQVRLER-----TGLRDYFDLLVISE---------QVGVAKPDVAIFDY  158 (224)
T ss_pred             CccHHHHHHHHH-hCCeEEEEeCCcH---HHHHHHHHh-----CChHHHcCEEEEEC---------ccCCCCCCHHHHHH
Confidence            468888888888 6899988988543   333444544     33211  1122221         222  334455543


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCC
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL  501 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~  501 (567)
                      . ++.+. +.++ ..  ..-.|++. +|+.+=+++|+..
T Consensus       159 ~-~~~~~-~~~~-~~--~~~vgD~~~~Di~~A~~aG~~~  192 (224)
T PRK09449        159 A-LEQMG-NPDR-SR--VLMVGDNLHSDILGGINAGIDT  192 (224)
T ss_pred             H-HHHcC-CCCc-cc--EEEEcCCcHHHHHHHHHCCCcE
Confidence            3 23221 1111 12  34578887 6999999999974

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=94.88  E-value=0.019  Score=58.18  Aligned_cols=55  Identities=22%  Similarity=0.472  Sum_probs=37.9

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHH---HCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIK---ENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  159 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~---~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP  159 (567)
                      .++++||+|||++..              ...+.+.|..-++   +.+-.|+|+|+|...++   ++-+..     .++|
T Consensus         2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~---~~~~~~-----~~l~   59 (247)
T PF05116_consen    2 PRLLASDLDGTLIDG--------------DDEALARLEELLEQQARPEILFVYVTGRSLESV---LRLLRE-----YNLP   59 (247)
T ss_dssp             SEEEEEETBTTTBHC--------------HHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHH---HHHHHH-----CT-E
T ss_pred             CEEEEEECCCCCcCC--------------CHHHHHHHHHHHHHhhCCCceEEEECCCCHHHH---HHHHHh-----CCCC
Confidence            358999999999921              1335667766666   66899999999999887   455555     5565

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=94.87  E-value=0.19  Score=49.40  Aligned_cols=130  Identities=22%  Similarity=0.333  Sum_probs=85.1

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEcc-----Cc-ccchH---HHHHHHHhcc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSA-----RA-IGQSR---VTREYLQSVK  152 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSa-----Rp-i~~a~---~Tr~~L~~~~  152 (567)
                      ..|++..|-||||-+--- + +...+-+=+-.+|+.+...++++.||+++-+|-     |. ..+++   .+..-+..+.
T Consensus         4 ~~k~lflDRDGtin~d~~-~-yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~   81 (181)
T COG0241           4 DQKALFLDRDGTINIDKG-D-YVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILA   81 (181)
T ss_pred             CCcEEEEcCCCceecCCC-c-ccCcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHH
Confidence            368999999999986421 1 322333335788999999999999999999996     31 12222   2222345666


Q ss_pred             cCCccCCCCceecCCCchhhhhhhh--hhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        153 QEDLTLPEGPMLLNPTSLLNAFHTE--VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       153 q~~~~LP~GPlllsp~~l~~al~RE--vi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      ++|..|. + ++..|.      +.|  ---++|   |..++.+..+-+.-+-. .-.-.|+|.+|+.+=.++||.
T Consensus        82 ~~gv~id-~-i~~Cph------~p~~~c~cRKP---~~gm~~~~~~~~~iD~~-~s~~VGD~~~Dlq~a~n~gi~  144 (181)
T COG0241          82 SQGVKID-G-ILYCPH------HPEDNCDCRKP---KPGMLLSALKEYNIDLS-RSYVVGDRLTDLQAAENAGIK  144 (181)
T ss_pred             HcCCccc-e-EEECCC------CCCCCCcccCC---ChHHHHHHHHHhCCCcc-ceEEecCcHHHHHHHHHCCCC
Confidence            6776664 2 333332      222  245667   88887777766553322 244678899999999999999

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=94.63  E-value=0.059  Score=55.26  Aligned_cols=53  Identities=15%  Similarity=0.161  Sum_probs=39.4

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHH-CCceEEEEccCcccch
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKE-NGYKLLYLSARAIGQS  141 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~-nGY~ilYLSaRpi~~a  141 (567)
                      ..+|++|+||||+....      .-..-...+...+..+++++ +|.+++.+|||+....
T Consensus        14 ~~li~~D~DGTLl~~~~------~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~   67 (266)
T PRK10187         14 NYAWFFDLDGTLAEIKP------HPDQVVVPDNILQGLQLLATANDGALALISGRSMVEL   67 (266)
T ss_pred             CEEEEEecCCCCCCCCC------CcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHH
Confidence            45899999999996310      00011345688888999988 7999999999998765

>PLN02940 riboflavin kinase

Probab=94.53  E-value=0.081  Score=57.14  Aligned_cols=92  Identities=16%  Similarity=0.237  Sum_probs=52.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKP--QEFKI  188 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP--~GPlllsp~~l~~al~REvi~k~p--~~fKi  188 (567)
                      .+|+.++.+.++++|+++.-+|+.+-..   ++..|..  .  .++-  --.++.+.         ++...+|  +.|..
T Consensus        95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~---~~~~l~~--~--~gl~~~Fd~ii~~d---------~v~~~KP~p~~~~~  158 (382)
T PLN02940         95 LPGANRLIKHLKSHGVPMALASNSPRAN---IEAKISC--H--QGWKESFSVIVGGD---------EVEKGKPSPDIFLE  158 (382)
T ss_pred             CcCHHHHHHHHHHCCCcEEEEeCCcHHH---HHHHHHh--c--cChHhhCCEEEehh---------hcCCCCCCHHHHHH
Confidence            4688889999999999999999976433   2333331  0  1111  01122221         2223344  44544


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      ++ +.+ .+ ++ ..  ...+|++..|+.+=+++|++.
T Consensus       159 a~-~~l-gv-~p-~~--~l~VGDs~~Di~aA~~aGi~~  190 (382)
T PLN02940        159 AA-KRL-NV-EP-SN--CLVIEDSLPGVMAGKAAGMEV  190 (382)
T ss_pred             HH-HHc-CC-Ch-hH--EEEEeCCHHHHHHHHHcCCEE
Confidence            44 222 11 11 12  456799999999999999973

>PRK09449 dUMP phosphatase; Provisional

Probab=94.50  E-value=0.28  Score=47.82  Aligned_cols=91  Identities=14%  Similarity=0.218  Sum_probs=49.4

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKP--QEFKI  188 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p--~~fKi  188 (567)
                      .+|+.++...++ +||++.-+|..+   .+.++..|+.     .+|..  -.++.+.         ++...||  +.|..
T Consensus        97 ~~g~~~~L~~L~-~~~~~~i~Tn~~---~~~~~~~l~~-----~~l~~~fd~v~~~~---------~~~~~KP~p~~~~~  158 (224)
T PRK09449         97 LPGAVELLNALR-GKVKMGIITNGF---TELQQVRLER-----TGLRDYFDLLVISE---------QVGVAKPDVAIFDY  158 (224)
T ss_pred             CccHHHHHHHHH-hCCeEEEEeCCc---HHHHHHHHHh-----CChHHHcCEEEEEC---------ccCCCCCCHHHHHH
Confidence            357888888888 579988888854   3344445544     33211  1122221         2223345  33432


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL  226 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~  226 (567)
                      .+ +.+ ...++ ..  ..-.|++. +|+.+=+++|+..
T Consensus       159 ~~-~~~-~~~~~-~~--~~~vgD~~~~Di~~A~~aG~~~  192 (224)
T PRK09449        159 AL-EQM-GNPDR-SR--VLMVGDNLHSDILGGINAGIDT  192 (224)
T ss_pred             HH-HHc-CCCCc-cc--EEEEcCCcHHHHHHHHHCCCcE
Confidence            22 222 11111 11  44567887 6999999999975

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=94.31  E-value=0.09  Score=55.28  Aligned_cols=52  Identities=17%  Similarity=0.273  Sum_probs=41.0

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHC----CceEEEEccCcccchHHHHHHH
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN----GYKLLYLSARAIGQSRVTREYL  423 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~n----GY~iiYLSaRpi~qa~~Tr~~L  423 (567)
                      .||||+||||..+.           . ..+|+.+.++.++.+    |+++++||...-.-.....++|
T Consensus         2 ~~ifD~DGvL~~g~-----------~-~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l   57 (321)
T TIGR01456         2 GFAFDIDGVLFRGK-----------K-PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEI   57 (321)
T ss_pred             EEEEeCcCceECCc-----------c-ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHH
Confidence            58999999998773           2 389999999999999    9999999986554444434444

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=94.23  E-value=0.091  Score=48.95  Aligned_cols=123  Identities=13%  Similarity=0.060  Sum_probs=70.5

Q ss_pred             CeEEEEecCCccccCCc---ccccccc---------cC-c--CCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHH
Q psy12533        358 DKIVISDIDGTITKSDV---LGHVLPI---------MG-K--DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREY  422 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~---~G~~~~~---------~G-k--Dw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~  422 (567)
                      .+++|.|+||||-.+-.   .+-..+.         .. .  -...||+.++...++ +||++.-.|+-+...++.   .
T Consensus         2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~---i   77 (148)
T smart00577        2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADP---V   77 (148)
T ss_pred             CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHH---H
Confidence            46799999999988632   1111110         00 0  135899999999998 679999999877665543   3


Q ss_pred             HHhcccCCccCCCCceecCCCchhhhhhhh-hhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        423 LQSVKQEDLTLPEGPMLLNPTSLLNAFHTE-VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       423 L~~~~Q~~~~lP~GPvl~spd~l~~al~rE-vi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      |+.     .++. ...   .+..   +.+| +...+|+     +++.+..+ .....- ...+|++..|+.+-.+.||+.
T Consensus        78 l~~-----l~~~-~~~---f~~i---~~~~d~~~~KP~-----~~k~l~~l-~~~p~~-~i~i~Ds~~~~~aa~~ngI~i  138 (148)
T smart00577       78 LDL-----LDPK-KYF---GYRR---LFRDECVFVKGK-----YVKDLSLL-GRDLSN-VIIIDDSPDSWPFHPENLIPI  138 (148)
T ss_pred             HHH-----hCcC-CCE---eeeE---EECccccccCCe-----EeecHHHc-CCChhc-EEEEECCHHHhhcCccCEEEe
Confidence            433     1111 100   0111   1222 2234665     33334332 111111 347899999999988888876


Q ss_pred             CC
Q psy12533        502 SR  503 (567)
Q Consensus       502 ~r  503 (567)
                      ..
T Consensus       139 ~~  140 (148)
T smart00577      139 KP  140 (148)
T ss_pred             cC
Confidence            54

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=94.16  E-value=0.099  Score=48.72  Aligned_cols=123  Identities=14%  Similarity=0.086  Sum_probs=69.6

Q ss_pred             CcEEEEecCCccccCCc---ccccccccc----------c--cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHH
Q psy12533         83 DKIVISDIDGTITKSDV---LGHVLPIMG----------K--DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREY  147 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~---lG~il~~lG----------k--Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~  147 (567)
                      .+.+|.|+||||-.+-.   .+-..+..+          +  -...||+.++...++ +||++.-+|+.+-..++.   .
T Consensus         2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~---i   77 (148)
T smart00577        2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADP---V   77 (148)
T ss_pred             CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHH---H
Confidence            35899999999988732   111111000          1  145789999999998 579999999976655543   3


Q ss_pred             HHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCC
Q psy12533        148 LQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLS  227 (567)
Q Consensus       148 L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~  227 (567)
                      |+.+.-.. .+ ..-++.+.         ++...+|+     +++.+..+ .....- ...+|++..|+.+-.+.||+..
T Consensus        78 l~~l~~~~-~~-f~~i~~~~---------d~~~~KP~-----~~k~l~~l-~~~p~~-~i~i~Ds~~~~~aa~~ngI~i~  139 (148)
T smart00577       78 LDLLDPKK-YF-GYRRLFRD---------ECVFVKGK-----YVKDLSLL-GRDLSN-VIIIDDSPDSWPFHPENLIPIK  139 (148)
T ss_pred             HHHhCcCC-CE-eeeEEECc---------cccccCCe-----EeecHHHc-CCChhc-EEEEECCHHHhhcCccCEEEec
Confidence            44310000 00 01122211         22334564     33333332 111111 4578999999999888888765

>PLN02423 phosphomannomutase

Probab=94.05  E-value=0.12  Score=52.39  Aligned_cols=54  Identities=15%  Similarity=0.225  Sum_probs=38.0

Q ss_pred             CCeE-EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        357 NDKI-VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       357 ~~ki-VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      ..|+ +.|||||||..++.           -..+...+.+++++++ .+|+-.|||+.   ...+..+..
T Consensus         5 ~~~~i~~~D~DGTLl~~~~-----------~i~~~~~~ai~~l~~~-i~fviaTGR~~---~~~~~~~~~   59 (245)
T PLN02423          5 KPGVIALFDVDGTLTAPRK-----------EATPEMLEFMKELRKV-VTVGVVGGSDL---SKISEQLGK   59 (245)
T ss_pred             ccceEEEEeccCCCcCCCC-----------cCCHHHHHHHHHHHhC-CEEEEECCcCH---HHHHHHhcc
Confidence            3454 45999999998751           1235668899999987 99999999943   333444443

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=93.95  E-value=0.099  Score=53.66  Aligned_cols=76  Identities=28%  Similarity=0.423  Sum_probs=58.3

Q ss_pred             cCCCcEEEEecCCccccCCc-c-cccc---cccccccc----------chhHHHHHHHHHHCCceEEEEccCcccc-hHH
Q psy12533         80 RWNDKIVISDIDGTITKSDV-L-GHVL---PIMGKDWA----------QNGVTRLFTKIKENGYKLLYLSARAIGQ-SRV  143 (567)
Q Consensus        80 ~~~~kiVISDIDGTITkSD~-l-G~il---~~lGkDwt----------h~GVa~Ly~~i~~nGY~ilYLSaRpi~~-a~~  143 (567)
                      .-..++||.|||-||...-. - .+++   +.-.++|+          -||+.++.+...+||-+|+|+|-|.-.. .+.
T Consensus        76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~  155 (274)
T COG2503          76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDG  155 (274)
T ss_pred             cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccch
Confidence            33455899999999998655 2 2332   33345654          3599999999999999999999998866 889


Q ss_pred             HHHHHHhcccCCccCCC
Q psy12533        144 TREYLQSVKQEDLTLPE  160 (567)
Q Consensus       144 Tr~~L~~~~q~~~~LP~  160 (567)
                      |.+=|.+     .+||.
T Consensus       156 T~~nLk~-----~g~~~  167 (274)
T COG2503         156 TIENLKS-----EGLPQ  167 (274)
T ss_pred             hHHHHHH-----cCccc
Confidence            9988887     67773

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=93.91  E-value=0.061  Score=52.00  Aligned_cols=39  Identities=21%  Similarity=0.457  Sum_probs=34.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCccc----chHHHHHHHHh
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIG----QSRVTREYLQS  425 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~----qa~~Tr~~L~~  425 (567)
                      +.+|+.++++++.+.|+.++|+|+||..    .+..|++||+.
T Consensus        74 p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~  116 (191)
T PF06941_consen   74 PIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLER  116 (191)
T ss_dssp             B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHH
Confidence            5679999999999999999999999887    67899999998

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PLN02423 phosphomannomutase

Probab=93.63  E-value=0.14  Score=51.80  Aligned_cols=43  Identities=16%  Similarity=0.298  Sum_probs=33.0

Q ss_pred             Cc-EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCc
Q psy12533         83 DK-IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARA  137 (567)
Q Consensus        83 ~k-iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRp  137 (567)
                      .| ++.||||||+..++-          . ..+...+..++++++ .+|+-+|||+
T Consensus         6 ~~~i~~~D~DGTLl~~~~----------~-i~~~~~~ai~~l~~~-i~fviaTGR~   49 (245)
T PLN02423          6 PGVIALFDVDGTLTAPRK----------E-ATPEMLEFMKELRKV-VTVGVVGGSD   49 (245)
T ss_pred             cceEEEEeccCCCcCCCC----------c-CCHHHHHHHHHHHhC-CEEEEECCcC
Confidence            35 455999999998752          1 234567889999987 9999999993

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=93.57  E-value=0.19  Score=52.28  Aligned_cols=69  Identities=16%  Similarity=0.311  Sum_probs=50.5

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      ++++||+||||-...            ..-||+++..+.++++|-+++|||-.+.--.+...+-|..  +.+...+..-+
T Consensus         9 ~~~l~DlDGvl~~G~------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~--~~~~~~~~~~i   74 (269)
T COG0647           9 DGFLFDLDGVLYRGN------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS--LGGVDVTPDDI   74 (269)
T ss_pred             CEEEEcCcCceEeCC------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh--hcCCCCCHHHe
Confidence            569999999998542            3578999999999999999999999988777655555544  02333444444


Q ss_pred             ecC
Q psy12533        439 LLN  441 (567)
Q Consensus       439 l~s  441 (567)
                      ++|
T Consensus        75 ~TS   77 (269)
T COG0647          75 VTS   77 (269)
T ss_pred             ecH
Confidence            443

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=93.36  E-value=0.17  Score=53.27  Aligned_cols=52  Identities=17%  Similarity=0.259  Sum_probs=41.0

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHC----CceEEEEccCcccchHHHHHHH
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN----GYKLLYLSARAIGQSRVTREYL  148 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~n----GY~ilYLSaRpi~~a~~Tr~~L  148 (567)
                      +||||+||||..++.            ..+|+.+.++.+..+    |+++++||...-.-.....++|
T Consensus         2 ~~ifD~DGvL~~g~~------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l   57 (321)
T TIGR01456         2 GFAFDIDGVLFRGKK------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEI   57 (321)
T ss_pred             EEEEeCcCceECCcc------------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHH
Confidence            589999999998732            278999999999999    9999999986544444444555

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=93.34  E-value=0.4  Score=46.65  Aligned_cols=130  Identities=15%  Similarity=0.190  Sum_probs=69.7

Q ss_pred             CcEEEEecCCccccCCc----ccccc----------cccccc-ccchhHHHHHHHHHHCCceEEEEccC-cccchHHHHH
Q psy12533         83 DKIVISDIDGTITKSDV----LGHVL----------PIMGKD-WAQNGVTRLFTKIKENGYKLLYLSAR-AIGQSRVTRE  146 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~----lG~il----------~~lGkD-wth~GVa~Ly~~i~~nGY~ilYLSaR-pi~~a~~Tr~  146 (567)
                      .|+||||.|+|+..--.    .+.+-          -..+.. -..+||.++.+.++++|+++.-+|+. +...   .+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~---~~~   78 (174)
T TIGR01685         2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEW---AYE   78 (174)
T ss_pred             CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHH---HHH
Confidence            57899999999875322    11111          111222 34569999999999999999999986 5543   344


Q ss_pred             HHHhcc--cCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhC----CCCCCCEEEecCCcccchhhhh
Q psy12533        147 YLQSVK--QEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALF----PPNTQPFYAGYGNKVNDVWSYQ  220 (567)
Q Consensus       147 ~L~~~~--q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf----~~~~~pf~agfGNr~tDv~aY~  220 (567)
                      .|..+.  ..|...|.=..+   +....+  .+...++|  + ..+++.+...+    .+  .- ..-+|++..|+.+=+
T Consensus        79 ~L~~~~l~~~~~~~~~~~~F---d~iv~~--~~~~~~kp--~-~~i~~~~~~~~~~gl~p--~e-~l~VgDs~~di~aA~  147 (174)
T TIGR01685        79 ILGTFEITYAGKTVPMHSLF---DDRIEI--YKPNKAKQ--L-EMILQKVNKVDPSVLKP--AQ-ILFFDDRTDNVREVW  147 (174)
T ss_pred             HHHhCCcCCCCCcccHHHhc---eeeeec--cCCchHHH--H-HHHHHHhhhcccCCCCH--HH-eEEEcChhHhHHHHH
Confidence            444411  111111100000   011100  11111111  1 12244444332    11  11 456899999999999


Q ss_pred             hcCCCC
Q psy12533        221 AVGIPL  226 (567)
Q Consensus       221 ~vGIp~  226 (567)
                      ++|+..
T Consensus       148 ~aGi~~  153 (174)
T TIGR01685       148 GYGVTS  153 (174)
T ss_pred             HhCCEE
Confidence            999865

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=93.24  E-value=0.23  Score=49.58  Aligned_cols=27  Identities=22%  Similarity=0.303  Sum_probs=20.3

Q ss_pred             EEecCCC-cccHHhHHHcCCCCCCEEEEcCC
Q psy12533        481 YAGYGNK-VNDVWSYQAVGIPLSRIFTINSR  510 (567)
Q Consensus       481 ~agfGNr-~tDv~aY~~vGIp~~rIF~In~~  510 (567)
                      ..-+|++ .+|+.+=+++|+..  |+ |+..
T Consensus       183 ~~~VGD~~~~Di~~A~~aG~~~--i~-v~~~  210 (238)
T PRK10748        183 ILHVGDDLTTDVAGAIRCGMQA--CW-INPE  210 (238)
T ss_pred             EEEEcCCcHHHHHHHHHCCCeE--EE-EcCC
Confidence            3468888 59999999999975  44 4554

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=93.23  E-value=0.24  Score=47.74  Aligned_cols=91  Identities=11%  Similarity=0.184  Sum_probs=49.0

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhc--cChhHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIE--KKPQEFKI  188 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~--k~p~~fKi  188 (567)
                      .+|+.++.+.++++ |++.-+|+.+....   +.-|+.     .+|-.  .-++.+.         ++..  ++|+.|..
T Consensus        99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~---~~~l~~-----~~l~~~fd~i~~~~---------~~~~~KP~~~~~~~  160 (224)
T TIGR02254        99 LPGAFELMENLQQK-FRLYIVTNGVRETQ---YKRLRK-----SGLFPFFDDIFVSE---------DAGIQKPDKEIFNY  160 (224)
T ss_pred             CccHHHHHHHHHhc-CcEEEEeCCchHHH---HHHHHH-----CCcHhhcCEEEEcC---------ccCCCCCCHHHHHH
Confidence            34777788888888 88888888654333   223333     22210  1122221         2222  33444553


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL  226 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~  226 (567)
                      .+ +.+..+ .+ ..  ..-+|++. +|+.+-+++|++.
T Consensus       161 ~~-~~~~~~-~~-~~--~v~igD~~~~di~~A~~~G~~~  194 (224)
T TIGR02254       161 AL-ERMPKF-SK-EE--VLMIGDSLTADIKGGQNAGLDT  194 (224)
T ss_pred             HH-HHhcCC-Cc-hh--eEEECCCcHHHHHHHHHCCCcE
Confidence            32 222111 11 11  34578877 7999999999986

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=92.94  E-value=0.27  Score=51.12  Aligned_cols=55  Identities=20%  Similarity=0.364  Sum_probs=46.4

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      +++++|+||||-+..            ..-||+++..+.++++|-+++|||-.+.--.++..+-|..
T Consensus         9 ~~~l~DlDGvl~~G~------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~   63 (269)
T COG0647           9 DGFLFDLDGVLYRGN------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS   63 (269)
T ss_pred             CEEEEcCcCceEeCC------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence            469999999998653            3567999999999999999999999998888766666655

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=92.93  E-value=0.43  Score=45.62  Aligned_cols=110  Identities=16%  Similarity=0.201  Sum_probs=66.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--Cc-eecCCCchhhhhhhhhhccCh-hHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GP-MLLNPTSLLNAFHTEVIEKKP-QEFKI  463 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GP-vl~spd~l~~al~rEvi~k~p-~~fK~  463 (567)
                      .+|+.++.+.++++|+++.-+|+.+....   +.+++.     .+++.  |. +....++.+   ..++..... ..-|.
T Consensus        89 ~~~~~~~l~~l~~~g~~v~ivS~s~~~~v---~~~~~~-----lg~~~~~~~~l~~~~~g~~---~g~~~~~~~~g~~K~  157 (202)
T TIGR01490        89 YPEARDLIRWHKAEGHTIVLVSASLTILV---KPLARI-----LGIDNAIGTRLEESEDGIY---TGNIDGNNCKGEGKV  157 (202)
T ss_pred             cHHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHHH-----cCCcceEecceEEcCCCEE---eCCccCCCCCChHHH
Confidence            56888888889999999999999887655   455544     33332  11 111122222   111111111 23477


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcc
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  513 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  513 (567)
                      ..++.+..-..-.. .-..+||+..+|+.+-+.+|.+    +.|||+.++
T Consensus       158 ~~l~~~~~~~~~~~-~~~~~~gDs~~D~~~~~~a~~~----~~v~~~~~l  202 (202)
T TIGR01490       158 HALAELLAEEQIDL-KDSYAYGDSISDLPLLSLVGHP----YVVNPDKKL  202 (202)
T ss_pred             HHHHHHHHHcCCCH-HHcEeeeCCcccHHHHHhCCCc----EEeCCCCCC
Confidence            76766654222111 1246899999999999999976    478887543

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=92.88  E-value=0.29  Score=59.58  Aligned_cols=92  Identities=17%  Similarity=0.195  Sum_probs=57.0

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC---CCceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP---EGPMLLNPTSLLNAFHTEVIEKKPQEFKIS  464 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP---~GPvl~spd~l~~al~rEvi~k~p~~fK~~  464 (567)
                      -||+.++.+.++++||++.-+|+.+....   +..|+.     .+++   --.++.+.+ .      ....++|+.|.. 
T Consensus       163 ~pG~~elL~~Lk~~G~~l~IvSn~~~~~~---~~~L~~-----~gl~~~~Fd~iv~~~~-~------~~~KP~Pe~~~~-  226 (1057)
T PLN02919        163 FPGALELITQCKNKGLKVAVASSADRIKV---DANLAA-----AGLPLSMFDAIVSADA-F------ENLKPAPDIFLA-  226 (1057)
T ss_pred             CccHHHHHHHHHhCCCeEEEEeCCcHHHH---HHHHHH-----cCCChhHCCEEEECcc-c------ccCCCCHHHHHH-
Confidence            45888888899999999999999755444   344554     3333   012222221 1      012455688864 


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +++.+.. =|  ..  ...+|++..|+.|=+++|+.
T Consensus       227 a~~~lgv-~p--~e--~v~IgDs~~Di~AA~~aGm~  257 (1057)
T PLN02919        227 AAKILGV-PT--SE--CVVIEDALAGVQAARAAGMR  257 (1057)
T ss_pred             HHHHcCc-Cc--cc--EEEEcCCHHHHHHHHHcCCE
Confidence            3444321 11  22  34699999999999999984

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=92.80  E-value=0.21  Score=50.11  Aligned_cols=40  Identities=18%  Similarity=0.427  Sum_probs=33.8

Q ss_pred             EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCc
Q psy12533        361 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARA  412 (567)
Q Consensus       361 VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRp  412 (567)
                      |+||+||||..++.            .-+|+.+.++.++++|++++++|..+
T Consensus         1 ~lfD~DGvL~~~~~------------~~~~a~e~i~~l~~~g~~~~~~tN~~   40 (236)
T TIGR01460         1 FLFDIDGVLWLGHK------------PIPGAAEALNRLRAKGKPVVFLTNNS   40 (236)
T ss_pred             CEEeCcCccCcCCc------------cCcCHHHHHHHHHHCCCeEEEEECCC
Confidence            68999999998742            35689999999999999999999443

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=92.74  E-value=0.28  Score=59.69  Aligned_cols=92  Identities=17%  Similarity=0.198  Sum_probs=55.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC---CCceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP---EGPMLLNPTSLLNAFHTEVIEKKPQEFKIS  189 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP---~GPlllsp~~l~~al~REvi~k~p~~fKi~  189 (567)
                      -+|+.++.+.++++||++.-+|+.+....   +..|+.     .+++   .-.++.+.+ .      ....++|+.|.. 
T Consensus       163 ~pG~~elL~~Lk~~G~~l~IvSn~~~~~~---~~~L~~-----~gl~~~~Fd~iv~~~~-~------~~~KP~Pe~~~~-  226 (1057)
T PLN02919        163 FPGALELITQCKNKGLKVAVASSADRIKV---DANLAA-----AGLPLSMFDAIVSADA-F------ENLKPAPDIFLA-  226 (1057)
T ss_pred             CccHHHHHHHHHhCCCeEEEEeCCcHHHH---HHHHHH-----cCCChhHCCEEEECcc-c------ccCCCCHHHHHH-
Confidence            35888888899999999999999655444   344554     3333   012222221 1      012445666754 


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      +++.+. +-|.  .  ...+|++..|+.+=+++|+.
T Consensus       227 a~~~lg-v~p~--e--~v~IgDs~~Di~AA~~aGm~  257 (1057)
T PLN02919        227 AAKILG-VPTS--E--CVVIEDALAGVQAARAAGMR  257 (1057)
T ss_pred             HHHHcC-cCcc--c--EEEEcCCHHHHHHHHHcCCE
Confidence            334332 1121  2  45689999999999999984

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=92.74  E-value=0.22  Score=51.26  Aligned_cols=76  Identities=29%  Similarity=0.469  Sum_probs=57.8

Q ss_pred             eCCCeEEEEecCCccccCCc-cc-ccc---cccCcCCc----------chhHHHHHHHHHHCCceEEEEccCcccc-hHH
Q psy12533        355 RWNDKIVISDIDGTITKSDV-LG-HVL---PIMGKDWA----------QNGVTRLFTKIKENGYKLLYLSARAIGQ-SRV  418 (567)
Q Consensus       355 ~~~~kiVIsDIDGTiTkSD~-~G-~~~---~~~GkDw~----------h~Gva~l~~~i~~nGY~iiYLSaRpi~q-a~~  418 (567)
                      .-..++||.|||-||...-. -| +++   +.-.++|.          -||+.++.+...+||-+|+|+|-|.... .+.
T Consensus        76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~  155 (274)
T COG2503          76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDG  155 (274)
T ss_pred             cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccch
Confidence            34556899999999987544 22 222   33355663          4799999999999999999999998877 888


Q ss_pred             HHHHHHhcccCCccCCC
Q psy12533        419 TREYLQSVKQEDLTLPE  435 (567)
Q Consensus       419 Tr~~L~~~~Q~~~~lP~  435 (567)
                      |.+=|.+     .+||.
T Consensus       156 T~~nLk~-----~g~~~  167 (274)
T COG2503         156 TIENLKS-----EGLPQ  167 (274)
T ss_pred             hHHHHHH-----cCccc
Confidence            8887776     66763

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=92.67  E-value=0.24  Score=49.46  Aligned_cols=21  Identities=19%  Similarity=0.213  Sum_probs=17.2

Q ss_pred             EEecCCc-ccchhhhhhcCCCC
Q psy12533        206 YAGYGNK-VNDVWSYQAVGIPL  226 (567)
Q Consensus       206 ~agfGNr-~tDv~aY~~vGIp~  226 (567)
                      ..-+|++ .+|+.+=+++|+..
T Consensus       183 ~~~VGD~~~~Di~~A~~aG~~~  204 (238)
T PRK10748        183 ILHVGDDLTTDVAGAIRCGMQA  204 (238)
T ss_pred             EEEEcCCcHHHHHHHHHCCCeE
Confidence            4567888 59999999999975

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=92.46  E-value=0.15  Score=49.37  Aligned_cols=39  Identities=21%  Similarity=0.457  Sum_probs=33.9

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCccc----chHHHHHHHHh
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIG----QSRVTREYLQS  150 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~----~a~~Tr~~L~~  150 (567)
                      +.+|+.+.++++.+.|+.++|+||||..    .+..|++||+.
T Consensus        74 p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~  116 (191)
T PF06941_consen   74 PIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLER  116 (191)
T ss_dssp             B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHH
Confidence            3459999999999999999999999887    67899999998

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=92.40  E-value=0.25  Score=49.49  Aligned_cols=53  Identities=19%  Similarity=0.326  Sum_probs=38.7

Q ss_pred             EEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         86 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        86 VISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      |+||+||||..++.            .-+|+.+..+.++++|++++++|..+-.-.....+.|..
T Consensus         1 ~lfD~DGvL~~~~~------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~   53 (236)
T TIGR01460         1 FLFDIDGVLWLGHK------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSS   53 (236)
T ss_pred             CEEeCcCccCcCCc------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence            68999999998742            245899999999999999999995443333333444433

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=92.31  E-value=0.49  Score=45.92  Aligned_cols=126  Identities=13%  Similarity=0.161  Sum_probs=69.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      .||+.++.+.++++|+++.-+|+.+.   ..++..|+.     .++..  ..++. .+..    ++  -.++|+.|...+
T Consensus        84 ~~g~~~~l~~L~~~g~~~~i~S~~~~---~~~~~~l~~-----~gl~~~f~~i~~-~~~~----~~--~Kp~p~~~~~~~  148 (214)
T PRK13288         84 YETVYETLKTLKKQGYKLGIVTTKMR---DTVEMGLKL-----TGLDEFFDVVIT-LDDV----EH--AKPDPEPVLKAL  148 (214)
T ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----cCChhceeEEEe-cCcC----CC--CCCCcHHHHHHH
Confidence            57999999999999999999999874   334555555     33321  11222 1111    00  133456665433


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcC--CCcccccccccccccHhhHHhhhhhc
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS--RGEVKHEMTQTFQSTYSNMSYLVDQM  535 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~--~g~~~~~~~~~~~~sY~~l~~~vd~~  535 (567)
                       +.+    .....- ..-+|++.+|+.|=+++|++.--+- -+.  ..++..........++..+.++++.|
T Consensus       149 -~~~----~~~~~~-~~~iGDs~~Di~aa~~aG~~~i~v~-~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~~  213 (214)
T PRK13288        149 -ELL----GAKPEE-ALMVGDNHHDILAGKNAGTKTAGVA-WTIKGREYLEQYKPDFMLDKMSDLLAIVGDM  213 (214)
T ss_pred             -HHc----CCCHHH-EEEECCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHhhcCcCEEECCHHHHHHHHhhc
Confidence             222    111111 3469999999999999999642110 111  12232222223356666666666554

>TIGR01686 FkbH FkbH-like domain

Probab=92.23  E-value=0.84  Score=47.93  Aligned_cols=122  Identities=16%  Similarity=0.162  Sum_probs=70.4

Q ss_pred             CCeEEEEecCCccccCCccccc-ccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533        357 NDKIVISDIDGTITKSDVLGHV-LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  435 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~-~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~  435 (567)
                      .-|+||+|.|+||..- ++|-- ...+.-.-.++|+.++...+++.|+++--+|.-+..   .++..|+.     |  | 
T Consensus         2 ~~k~~v~DlDnTlw~g-v~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~---~a~~~l~~-----~--~-   69 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGG-VLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDED---DAKKVFER-----R--K-   69 (320)
T ss_pred             CeEEEEEcCCCCCCCC-EEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHh-----C--c-
Confidence            4689999999999853 22211 000001124899999999999999999999998664   34555644     1  1 


Q ss_pred             CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        436 GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       436 GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                      +-+.+ + ..|.+.   .+..+|   |-+.+..+..-+.-...- ..-+|++..|+.+-++.+.
T Consensus        70 ~~~~~-~-~~f~~~---~~~~~p---k~~~i~~~~~~l~i~~~~-~vfidD~~~d~~~~~~~lp  124 (320)
T TIGR01686        70 DFILQ-A-EDFDAR---SINWGP---KSESLRKIAKKLNLGTDS-FLFIDDNPAERANVKITLP  124 (320)
T ss_pred             cccCc-H-HHeeEE---EEecCc---hHHHHHHHHHHhCCCcCc-EEEECCCHHHHHHHHHHCC
Confidence            10111 1 122222   112234   444444444333222223 3468999999999888654

The C-terminal portion of this domain is unique to this family (by BLAST).

>PLN02382 probable sucrose-phosphatase

Probab=91.73  E-value=0.23  Score=54.43  Aligned_cols=55  Identities=15%  Similarity=0.243  Sum_probs=38.2

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      +|+||+|||+..++  +.      +.-+-.-...++.++.++|-.|++.|||+..++   +.+++.
T Consensus        11 lI~sDLDGTLL~~~--~~------~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~---~~l~~~   65 (413)
T PLN02382         11 MIVSDLDHTMVDHH--DP------ENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLY---KELRKE   65 (413)
T ss_pred             EEEEcCCCcCcCCC--Cc------cchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHH---HHHHHh
Confidence            79999999999662  00      011222345566778899999999999998776   444444

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=91.39  E-value=0.4  Score=46.96  Aligned_cols=71  Identities=24%  Similarity=0.329  Sum_probs=48.8

Q ss_pred             CceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHH-HhCCCCCCCE
Q psy12533        127 GYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIM-ALFPPNTQPF  205 (567)
Q Consensus       127 GY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~-~lf~~~~~pf  205 (567)
                      -.+++|+|||.--....|..||..     .++|       -+.|      |.+...   .|++|.+... ++      +|
T Consensus        87 ~~~L~~itar~~dl~~iT~~~l~~-----q~ih-------~~~l------~i~g~h---~KV~~vrth~idl------f~  139 (194)
T COG5663          87 EHRLIYITARKADLTRITYAWLFI-----QNIH-------YDHL------EIVGLH---HKVEAVRTHNIDL------FF  139 (194)
T ss_pred             hceeeeeehhhHHHHHHHHHHHHH-----hccc-------hhhh------hhhccc---ccchhhHhhccCc------cc
Confidence            389999999999999999999998     7787       4444      333332   3788877654 33      33


Q ss_pred             EEecCCcccchhhhhhcCCCCC
Q psy12533        206 YAGYGNKVNDVWSYQAVGIPLS  227 (567)
Q Consensus       206 ~agfGNr~tDv~aY~~vGIp~~  227 (567)
                      ---+||   =..+=+.+|+|.-
T Consensus       140 ed~~~n---a~~iAk~~~~~vi  158 (194)
T COG5663         140 EDSHDN---AGQIAKNAGIPVI  158 (194)
T ss_pred             cccCch---HHHHHHhcCCcEE
Confidence            333444   4566667888753

>PLN02382 probable sucrose-phosphatase

Probab=91.26  E-value=0.27  Score=53.86  Aligned_cols=51  Identities=14%  Similarity=0.208  Sum_probs=35.1

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  416 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa  416 (567)
                      .-+|+||+|||+..++  +.      +.-+-.-...++.+..++|-.+++.|||+..+.
T Consensus         9 ~~lI~sDLDGTLL~~~--~~------~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~   59 (413)
T PLN02382          9 RLMIVSDLDHTMVDHH--DP------ENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLY   59 (413)
T ss_pred             CEEEEEcCCCcCcCCC--Cc------cchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHH
Confidence            3468999999999662  00      011223345566778889999999999986555

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=91.26  E-value=0.6  Score=46.12  Aligned_cols=91  Identities=24%  Similarity=0.314  Sum_probs=54.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP--~GPlllsp~~l~~al~REvi~k~p~~fKi~~  190 (567)
                      =+||.++...+++.||++.-+|+++..-+.   ..|+.     ++|-  -.-++. .+        ..-.+||+--.+..
T Consensus        91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~---~~l~~-----~gl~~~F~~i~g-~~--------~~~~~KP~P~~l~~  153 (220)
T COG0546          91 FPGVKELLAALKSAGYKLGIVTNKPERELD---ILLKA-----LGLADYFDVIVG-GD--------DVPPPKPDPEPLLL  153 (220)
T ss_pred             CCCHHHHHHHHHhCCCeEEEEeCCcHHHHH---HHHHH-----hCCccccceEEc-CC--------CCCCCCcCHHHHHH
Confidence            358999999999999999999998776554   44443     2221  111111 11        22344554432222


Q ss_pred             -HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        191 -LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       191 -L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                       ++.+... |.    =....|++..|+.|=+++|++
T Consensus       154 ~~~~~~~~-~~----~~l~VGDs~~Di~aA~~Ag~~  184 (220)
T COG0546         154 LLEKLGLD-PE----EALMVGDSLNDILAAKAAGVP  184 (220)
T ss_pred             HHHHhCCC-hh----heEEECCCHHHHHHHHHcCCC
Confidence             2222111 10    145679999999999999966

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=91.25  E-value=0.3  Score=45.41  Aligned_cols=65  Identities=15%  Similarity=0.261  Sum_probs=43.4

Q ss_pred             cEEEEecCCccccCCcccccc------c-ccc-ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHH
Q psy12533         84 KIVISDIDGTITKSDVLGHVL------P-IMG-KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ  149 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il------~-~lG-kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~  149 (567)
                      |++|.|+||||..+....+.-      . ..+ .-+.+||+.++...+++. |.++-.|+.....++..-+.|.
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld   73 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD   73 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT
T ss_pred             CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh
Confidence            689999999999887654320      0 011 126799999999999665 9999999987666666555554

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=91.21  E-value=0.28  Score=45.59  Aligned_cols=65  Identities=15%  Similarity=0.273  Sum_probs=42.6

Q ss_pred             eEEEEecCCccccCCcccccc------ccc-C-cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHH
Q psy12533        359 KIVISDIDGTITKSDVLGHVL------PIM-G-KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ  424 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~------~~~-G-kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~  424 (567)
                      |++|+|+||||..+....+.-      ... + .-+.+||+.++...+.+. |.++-.|+.....+...-+.|.
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld   73 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD   73 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT
T ss_pred             CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh
Confidence            689999999999887654320      000 1 124799999999998655 9999999987666655555543

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=91.20  E-value=1  Score=46.20  Aligned_cols=77  Identities=22%  Similarity=0.380  Sum_probs=55.3

Q ss_pred             CCeEEEEecCCccccCC-ccccc-cc-----cc--------------CcCC------------cchhHHHHHHHHHHCCc
Q psy12533        357 NDKIVISDIDGTITKSD-VLGHV-LP-----IM--------------GKDW------------AQNGVTRLFTKIKENGY  403 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD-~~G~~-~~-----~~--------------GkDw------------~h~Gva~l~~~i~~nGY  403 (567)
                      .+-.||||||-||..+. .+|+- +-     .+              -.+|            +++.+.++++.+++.|.
T Consensus        19 ~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~   98 (252)
T PF11019_consen   19 QDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGI   98 (252)
T ss_pred             CCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCC
Confidence            56679999999998876 45531 10     01              1123            46677889999999999


Q ss_pred             eEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533        404 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  436 (567)
Q Consensus       404 ~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G  436 (567)
                      .++=||+|+..+...|-..|+.   .|..|-.-
T Consensus        99 ~v~alT~~~~~~~~~t~~~Lk~---~gi~fs~~  128 (252)
T PF11019_consen   99 PVIALTARGPNMEDWTLRELKS---LGIDFSSS  128 (252)
T ss_pred             cEEEEcCCChhhHHHHHHHHHH---CCCCcccc
Confidence            9999999998888777776665   55555543

The function is not known.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=90.98  E-value=0.9  Score=44.89  Aligned_cols=90  Identities=24%  Similarity=0.342  Sum_probs=55.1

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP--~GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      =+||.++...+++.||++--+|+++..-+   +..|+.     +++-  -.-++. .+        ..-.+||+--.+..
T Consensus        91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~~---~~~l~~-----~gl~~~F~~i~g-~~--------~~~~~KP~P~~l~~  153 (220)
T COG0546          91 FPGVKELLAALKSAGYKLGIVTNKPEREL---DILLKA-----LGLADYFDVIVG-GD--------DVPPPKPDPEPLLL  153 (220)
T ss_pred             CCCHHHHHHHHHhCCCeEEEEeCCcHHHH---HHHHHH-----hCCccccceEEc-CC--------CCCCCCcCHHHHHH
Confidence            46899999999999999999999887666   444444     2221  111111 12        22244553332222


Q ss_pred             -HHHHHhhCCCCCCC-EEEecCCCcccHHhHHHcCCC
Q psy12533        466 -LRDIMALFPPNTQP-FYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       466 -L~~i~~lf~~~~~p-f~agfGNr~tDv~aY~~vGIp  500 (567)
                       ++.+..    .  | =....|++..|+.|=+++|++
T Consensus       154 ~~~~~~~----~--~~~~l~VGDs~~Di~aA~~Ag~~  184 (220)
T COG0546         154 LLEKLGL----D--PEEALMVGDSLNDILAAKAAGVP  184 (220)
T ss_pred             HHHHhCC----C--hhheEEECCCHHHHHHHHHcCCC
Confidence             332222    1  2 134789999999999999976

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=90.72  E-value=1.1  Score=43.00  Aligned_cols=94  Identities=17%  Similarity=0.270  Sum_probs=58.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~  464 (567)
                      ..||+.++.+.++++||++.-+|+.+..   .++.+|+.     .++..  ..++.+.+ .-      .-.++|+.|...
T Consensus        86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~~---~~~~~l~~-----~~l~~~f~~~~~~~~-~~------~~Kp~p~~~~~~  150 (213)
T TIGR01449        86 VFPGVEATLGALRAKGLRLGLVTNKPTP---LARPLLEL-----LGLAKYFSVLIGGDS-LA------QRKPHPDPLLLA  150 (213)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHH-----cCcHhhCcEEEecCC-CC------CCCCChHHHHHH
Confidence            4679999999999999999999997553   34666666     33321  12222221 10      013345655543


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      + +.    ++....- ...+|++.+|+.+-+++|++.
T Consensus       151 ~-~~----~~~~~~~-~~~igDs~~d~~aa~~aG~~~  181 (213)
T TIGR01449       151 A-ER----LGVAPQQ-MVYVGDSRVDIQAARAAGCPS  181 (213)
T ss_pred             H-HH----cCCChhH-eEEeCCCHHHHHHHHHCCCeE
Confidence            3 22    2211112 346999999999999999975

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=90.68  E-value=0.52  Score=48.37  Aligned_cols=76  Identities=22%  Similarity=0.390  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCccccCC-ccccc-c-----ccc--------------cccc------------cchhHHHHHHHHHHCCc
Q psy12533         82 NDKIVISDIDGTITKSD-VLGHV-L-----PIM--------------GKDW------------AQNGVTRLFTKIKENGY  128 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD-~lG~i-l-----~~l--------------GkDw------------th~GVa~Ly~~i~~nGY  128 (567)
                      .+-.||+|||-||..+. .+|+- +     ..+              -.+|            +++.+.++.+.+++.|.
T Consensus        19 ~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~   98 (252)
T PF11019_consen   19 QDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGI   98 (252)
T ss_pred             CCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCC
Confidence            34479999999998876 45541 0     001              1123            35577788999999999


Q ss_pred             eEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533        129 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  160 (567)
Q Consensus       129 ~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~  160 (567)
                      +++=||+|+..+...|-..|+.   .|..|-.
T Consensus        99 ~v~alT~~~~~~~~~t~~~Lk~---~gi~fs~  127 (252)
T PF11019_consen   99 PVIALTARGPNMEDWTLRELKS---LGIDFSS  127 (252)
T ss_pred             cEEEEcCCChhhHHHHHHHHHH---CCCCccc
Confidence            9999999999998888888877   4444443

The function is not known.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=90.53  E-value=2.5  Score=40.81  Aligned_cols=95  Identities=18%  Similarity=0.277  Sum_probs=57.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      ..+|+.++...++++|+++..+|+.+....   +.+++.     ++|..- ..+++.+..      ....++|+.|+.. 
T Consensus        94 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~---~~~l~~-----~~l~~~f~~~~~~~~~------~~~kp~~~~~~~~-  158 (226)
T PRK13222         94 LYPGVKETLAALKAAGYPLAVVTNKPTPFV---APLLEA-----LGIADYFSVVIGGDSL------PNKKPDPAPLLLA-  158 (226)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHH-----cCCccCccEEEcCCCC------CCCCcChHHHHHH-
Confidence            347999999999999999999999875433   555555     333210 011111111      1122344544443 


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                          ...+...... ...+|++.+|+.+=+++|++.
T Consensus       159 ----~~~~~~~~~~-~i~igD~~~Di~~a~~~g~~~  189 (226)
T PRK13222        159 ----CEKLGLDPEE-MLFVGDSRNDIQAARAAGCPS  189 (226)
T ss_pred             ----HHHcCCChhh-eEEECCCHHHHHHHHHCCCcE
Confidence                2222222222 347999999999999999964

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=90.43  E-value=0.36  Score=47.96  Aligned_cols=39  Identities=15%  Similarity=0.249  Sum_probs=30.4

Q ss_pred             ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcc
Q psy12533        111 WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVK  152 (567)
Q Consensus       111 wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~  152 (567)
                      .-.||.-++|..++++|-+++-+||   ||--..+..|+++.
T Consensus        73 ~Idp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~iv  111 (220)
T COG4359          73 KIDPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGIV  111 (220)
T ss_pred             ccCccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhhc
Confidence            4566777888888999999999998   77777777777654

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=89.92  E-value=0.48  Score=55.32  Aligned_cols=60  Identities=12%  Similarity=0.194  Sum_probs=43.5

Q ss_pred             CCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHH
Q psy12533        356 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQ  424 (567)
Q Consensus       356 ~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~n-GY~iiYLSaRpi~qa~~Tr~~L~  424 (567)
                      ...+++++|+||||+..+...      ...-.++.+.+..+++.+. |..++.+|||+....   +.|+.
T Consensus       490 ~~~rLi~~D~DGTL~~~~~~~------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l---~~~~~  550 (726)
T PRK14501        490 ASRRLLLLDYDGTLVPFAPDP------ELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTL---ERWFG  550 (726)
T ss_pred             ccceEEEEecCccccCCCCCc------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHH---HHHhC
Confidence            456899999999999642110      0113467899999999995 999999999985433   45554

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=89.71  E-value=1.7  Score=42.25  Aligned_cols=96  Identities=13%  Similarity=0.089  Sum_probs=58.8

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-CccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~-~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      .-+|+.++...+++.||++.-+|+.+.....   ..|+.+.=. +.-|+  .++++.+ ..      ...++|+.|..++
T Consensus        88 l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~---~~l~~~~l~~~~~f~--~i~~~~~-~~------~~KP~p~~~~~a~  155 (220)
T TIGR03351        88 ALPGAEEAFRSLRSSGIKVALTTGFDRDTAE---RLLEKLGWTVGDDVD--AVVCPSD-VA------AGRPAPDLILRAM  155 (220)
T ss_pred             cCCCHHHHHHHHHHCCCEEEEEeCCchHHHH---HHHHHhhhhhhccCC--EEEcCCc-CC------CCCCCHHHHHHHH
Confidence            4568999999999999999999998766553   344331100 01132  3444433 21      1234556666432


Q ss_pred             HHHHHhhCCCC--CCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        466 LRDIMALFPPN--TQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       466 L~~i~~lf~~~--~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                       +.    +...  ..  ..-+|++.+|+.+=+++|++.
T Consensus       156 -~~----~~~~~~~~--~~~igD~~~Di~aa~~aG~~~  186 (220)
T TIGR03351       156 -EL----TGVQDVQS--VAVAGDTPNDLEAGINAGAGA  186 (220)
T ss_pred             -HH----cCCCChhH--eEEeCCCHHHHHHHHHCCCCe
Confidence             22    2111  22  346789999999999999994

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PLN03017 trehalose-phosphatase

Probab=89.61  E-value=0.51  Score=51.15  Aligned_cols=57  Identities=21%  Similarity=0.346  Sum_probs=42.6

Q ss_pred             EeeeCCCeEEEEecCCccccCCcccccccccC-cC--CcchhHHHHHHHHHHCCceEEEEccCcccchHH
Q psy12533        352 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMG-KD--WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRV  418 (567)
Q Consensus       352 ylw~~~~kiVIsDIDGTiTkSD~~G~~~~~~G-kD--w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~  418 (567)
                      .+......+|++|+||||+         |++. .+  ...+...+..++++ +|+++.-+|||+......
T Consensus       105 ~~~~~k~~llflD~DGTL~---------Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~  164 (366)
T PLN03017        105 EASRGKQIVMFLDYDGTLS---------PIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYN  164 (366)
T ss_pred             HHhcCCCeEEEEecCCcCc---------CCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHH
Confidence            3345566778999999998         2221 11  35678889999999 889999999999876643

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=89.55  E-value=1.1  Score=43.54  Aligned_cols=20  Identities=15%  Similarity=0.028  Sum_probs=17.0

Q ss_pred             EecCCCcccHHhHHHcCCCC
Q psy12533        482 AGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       482 agfGNr~tDv~aY~~vGIp~  501 (567)
                      .-+|++.+|+.+=+++|++.
T Consensus       163 l~igDs~~di~aA~~aG~~~  182 (221)
T PRK10563        163 ILVDDSSAGAQSGIAAGMEV  182 (221)
T ss_pred             EEEeCcHhhHHHHHHCCCEE
Confidence            34678899999999999974

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=89.46  E-value=1.3  Score=43.94  Aligned_cols=125  Identities=21%  Similarity=0.338  Sum_probs=82.0

Q ss_pred             CCeEEEEecCCccccCCc---ccc---------------cccccCcCC-----cchhHHHHHHHHHHCCceEEEEccCcc
Q psy12533        357 NDKIVISDIDGTITKSDV---LGH---------------VLPIMGKDW-----AQNGVTRLFTKIKENGYKLLYLSARAI  413 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~---~G~---------------~~~~~GkDw-----~h~Gva~l~~~i~~nGY~iiYLSaRpi  413 (567)
                      -+-.|-||||.|+.-|.-   .|.               +|..|..-|     +..-+.+|-.+=+..|=+|.++|+|.-
T Consensus        62 ~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~  141 (237)
T COG3700          62 PPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTP  141 (237)
T ss_pred             CCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCC
Confidence            344589999999987643   331               223333333     223445677777889999999999998


Q ss_pred             cchHHHHHHHHhcccCCccC-CCCceecCCCchhhhhhhhhhccCh-hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccH
Q psy12533        414 GQSRVTREYLQSVKQEDLTL-PEGPMLLNPTSLLNAFHTEVIEKKP-QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDV  491 (567)
Q Consensus       414 ~qa~~Tr~~L~~~~Q~~~~l-P~GPvl~spd~l~~al~rEvi~k~p-~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv  491 (567)
                      +-.+.+-.-|..    +.++ -+-||.+..|.           .+| +.-|..+|.+       +..-  -=||+.++|+
T Consensus       142 gk~d~vsk~Lak----~F~i~~m~pv~f~Gdk-----------~k~~qy~Kt~~i~~-------~~~~--IhYGDSD~Di  197 (237)
T COG3700         142 GKTDTVSKTLAK----NFHITNMNPVIFAGDK-----------PKPGQYTKTQWIQD-------KNIR--IHYGDSDNDI  197 (237)
T ss_pred             CcccccchhHHh----hcccCCCcceeeccCC-----------CCcccccccHHHHh-------cCce--EEecCCchhh
Confidence            877777666653    1222 23466665542           245 4447776653       2222  3589999999


Q ss_pred             HhHHHcCCCCCCEE
Q psy12533        492 WSYQAVGIPLSRIF  505 (567)
Q Consensus       492 ~aY~~vGIp~~rIF  505 (567)
                      .|=+.+|+-.=||.
T Consensus       198 ~AAkeaG~RgIRil  211 (237)
T COG3700         198 TAAKEAGARGIRIL  211 (237)
T ss_pred             hHHHhcCccceeEE
Confidence            99999999888884

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=89.44  E-value=0.81  Score=45.69  Aligned_cols=116  Identities=20%  Similarity=0.182  Sum_probs=77.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh-hHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP-QEFKISC  190 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p-~~fKi~~  190 (567)
                      -.+|+.+|...++++|++++-+||-+...++...+-|.--.-      -+-.+...++.   +...++...- .+-|...
T Consensus        78 l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~------~an~l~~~dG~---ltG~v~g~~~~~~~K~~~  148 (212)
T COG0560          78 LTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYV------VANELEIDDGK---LTGRVVGPICDGEGKAKA  148 (212)
T ss_pred             CCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchh------eeeEEEEeCCE---EeceeeeeecCcchHHHH
Confidence            356889999999999999999999998887777776642100      11222222221   1111211111 1358888


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE  241 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~  241 (567)
                      |+++....+-. .-=..+||+..+|.-+-+.+|.+    +.+||++++...
T Consensus       149 l~~~~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~----ia~n~~~~l~~~  194 (212)
T COG0560         149 LRELAAELGIP-LEETVAYGDSANDLPMLEAAGLP----IAVNPKPKLRAL  194 (212)
T ss_pred             HHHHHHHcCCC-HHHeEEEcCchhhHHHHHhCCCC----eEeCcCHHHHHH
Confidence            88888765432 11367999999999999999988    578999887654

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=89.40  E-value=1.1  Score=43.49  Aligned_cols=92  Identities=15%  Similarity=0.197  Sum_probs=54.2

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      +|+.++.+.++++|+++.-+|+.+.   ..++..|+.     .++..  ..++.+.+ .    ++  ...+|+.|...+ 
T Consensus        85 ~g~~~~l~~L~~~g~~~~i~S~~~~---~~~~~~l~~-----~gl~~~f~~i~~~~~-~----~~--~Kp~p~~~~~~~-  148 (214)
T PRK13288         85 ETVYETLKTLKKQGYKLGIVTTKMR---DTVEMGLKL-----TGLDEFFDVVITLDD-V----EH--AKPDPEPVLKAL-  148 (214)
T ss_pred             cCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----cCChhceeEEEecCc-C----CC--CCCCcHHHHHHH-
Confidence            5888999999999999999999763   344555555     33321  11222111 1    00  123444454333 


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                          ..+.-...- ..-+|++.+|+.+=+++|++.
T Consensus       149 ----~~~~~~~~~-~~~iGDs~~Di~aa~~aG~~~  178 (214)
T PRK13288        149 ----ELLGAKPEE-ALMVGDNHHDILAGKNAGTKT  178 (214)
T ss_pred             ----HHcCCCHHH-EEEECCCHHHHHHHHHCCCeE
Confidence                222211111 346899999999999999964

>TIGR01686 FkbH FkbH-like domain

Probab=89.33  E-value=2.4  Score=44.54  Aligned_cols=120  Identities=17%  Similarity=0.147  Sum_probs=71.3

Q ss_pred             CCcEEEEecCCccccCCccccc---cccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533         82 NDKIVISDIDGTITKSDVLGHV---LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  158 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~i---l~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L  158 (567)
                      .-|+||+|.|+|+.. +++|.-   .-.++  -.++|+.++...+++.|+++--+|..+.   ..++..|+.     |  
T Consensus         2 ~~k~~v~DlDnTlw~-gv~~e~g~~~i~~~--~~~~~~~e~L~~L~~~Gi~lai~S~n~~---~~a~~~l~~-----~--   68 (320)
T TIGR01686         2 ALKVLVLDLDNTLWG-GVLGEDGIDNLNLS--PLHKTLQEKIKTLKKQGFLLALASKNDE---DDAKKVFER-----R--   68 (320)
T ss_pred             CeEEEEEcCCCCCCC-CEEccCCccccccC--ccHHHHHHHHHHHHhCCCEEEEEcCCCH---HHHHHHHHh-----C--
Confidence            458999999999984 333321   11112  2478999999999999999999999765   344566654     1  


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533        159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  224 (567)
Q Consensus       159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  224 (567)
                      | +-+.+ + ..|.+.   .+..+|   |-+.+..+...+.-+..- ..-+|+...|+.+-++.+.
T Consensus        69 ~-~~~~~-~-~~f~~~---~~~~~p---k~~~i~~~~~~l~i~~~~-~vfidD~~~d~~~~~~~lp  124 (320)
T TIGR01686        69 K-DFILQ-A-EDFDAR---SINWGP---KSESLRKIAKKLNLGTDS-FLFIDDNPAERANVKITLP  124 (320)
T ss_pred             c-cccCc-H-HHeeEE---EEecCc---hHHHHHHHHHHhCCCcCc-EEEECCCHHHHHHHHHHCC
Confidence            1 10111 1 122221   122344   555555555444322223 4467888999998888654

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=89.08  E-value=0.59  Score=54.54  Aligned_cols=52  Identities=13%  Similarity=0.222  Sum_probs=39.2

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHC-CceEEEEccCccc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN-GYKLLYLSARAIG  139 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~n-GY~ilYLSaRpi~  139 (567)
                      ..+++++|+||||+..+...      ...-.++...+..+++.+. |..++.+|||+..
T Consensus       491 ~~rLi~~D~DGTL~~~~~~~------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~  543 (726)
T PRK14501        491 SRRLLLLDYDGTLVPFAPDP------ELAVPDKELRDLLRRLAADPNTDVAIISGRDRD  543 (726)
T ss_pred             cceEEEEecCccccCCCCCc------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHH
Confidence            45799999999999743111      0113467889999999995 9999999999843

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=88.82  E-value=1.8  Score=42.41  Aligned_cols=97  Identities=15%  Similarity=0.174  Sum_probs=58.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      .||+.++...++++||++.-+|+.+..   .++..++.     .++..  ..++.+.+ .      ....++|+.|...|
T Consensus        94 ~~g~~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~-----~~l~~~f~~~~~~~~-~------~~~Kp~~~~~~~~~  158 (222)
T PRK10826         94 LPGVREALALCKAQGLKIGLASASPLH---MLEAVLTM-----FDLRDYFDALASAEK-L------PYSKPHPEVYLNCA  158 (222)
T ss_pred             CCCHHHHHHHHHHCCCeEEEEeCCcHH---HHHHHHHh-----CcchhcccEEEEccc-C------CCCCCCHHHHHHHH
Confidence            579999999999999999999996543   34555554     22211  11222211 1      11245566664433


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEE
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTI  507 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~I  507 (567)
                           ..+.-...- ...+|++.+|+.+-+++|++.  |++-
T Consensus       159 -----~~~~~~~~~-~~~igDs~~Di~aA~~aG~~~--i~v~  192 (222)
T PRK10826        159 -----AKLGVDPLT-CVALEDSFNGMIAAKAARMRS--IVVP  192 (222)
T ss_pred             -----HHcCCCHHH-eEEEcCChhhHHHHHHcCCEE--EEec
Confidence                 211111111 357899999999999999964  5443

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=88.81  E-value=0.99  Score=44.28  Aligned_cols=79  Identities=24%  Similarity=0.311  Sum_probs=51.3

Q ss_pred             CceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHH-hhCCCCCCCE
Q psy12533        402 GYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIM-ALFPPNTQPF  480 (567)
Q Consensus       402 GY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~-~lf~~~~~pf  480 (567)
                      -.+++|.|||.--....|.+||..     .++|       -+.++      .+....   |.+|.+... ++|.+     
T Consensus        87 ~~~L~~itar~~dl~~iT~~~l~~-----q~ih-------~~~l~------i~g~h~---KV~~vrth~idlf~e-----  140 (194)
T COG5663          87 EHRLIYITARKADLTRITYAWLFI-----QNIH-------YDHLE------IVGLHH---KVEAVRTHNIDLFFE-----  140 (194)
T ss_pred             hceeeeeehhhHHHHHHHHHHHHH-----hccc-------hhhhh------hhcccc---cchhhHhhccCcccc-----
Confidence            379999999999999999999988     7787       34332      222222   677877643 43333     


Q ss_pred             EEecCCCcccHHhHHHcCCCCCCEEEEcC-CCcc
Q psy12533        481 YAGYGNKVNDVWSYQAVGIPLSRIFTINS-RGEV  513 (567)
Q Consensus       481 ~agfGNr~tDv~aY~~vGIp~~rIF~In~-~g~~  513 (567)
                       --+||   =..+=+.+|+|.   ..||. .|++
T Consensus       141 -d~~~n---a~~iAk~~~~~v---ilins~ynRk  167 (194)
T COG5663         141 -DSHDN---AGQIAKNAGIPV---ILINSPYNRK  167 (194)
T ss_pred             -ccCch---HHHHHHhcCCcE---EEecCccccc
Confidence             33444   466667788875   34455 3444

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=88.75  E-value=1.3  Score=42.64  Aligned_cols=94  Identities=17%  Similarity=0.260  Sum_probs=57.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~  189 (567)
                      ..+|+.++.+.++++||++..+|+.+.   ..++.+|+.     .++..  ..++.+.+ .-      ...++|+.|...
T Consensus        86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~---~~~~~~l~~-----~~l~~~f~~~~~~~~-~~------~~Kp~p~~~~~~  150 (213)
T TIGR01449        86 VFPGVEATLGALRAKGLRLGLVTNKPT---PLARPLLEL-----LGLAKYFSVLIGGDS-LA------QRKPHPDPLLLA  150 (213)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----cCcHhhCcEEEecCC-CC------CCCCChHHHHHH
Confidence            456999999999999999999999654   445666665     33321  11222221 10      012334444433


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                           ...+.-...- ...+|++.+|+.+-+++|++.
T Consensus       151 -----~~~~~~~~~~-~~~igDs~~d~~aa~~aG~~~  181 (213)
T TIGR01449       151 -----AERLGVAPQQ-MVYVGDSRVDIQAARAAGCPS  181 (213)
T ss_pred             -----HHHcCCChhH-eEEeCCCHHHHHHHHHCCCeE
Confidence                 3333211111 456999999999999999975

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PLN03017 trehalose-phosphatase

Probab=88.58  E-value=0.63  Score=50.47  Aligned_cols=54  Identities=22%  Similarity=0.398  Sum_probs=40.0

Q ss_pred             ecCCCcEEEEecCCccccCCcccccccccc---ccccchhHHHHHHHHHHCCceEEEEccCcccchH
Q psy12533         79 WRWNDKIVISDIDGTITKSDVLGHVLPIMG---KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR  142 (567)
Q Consensus        79 w~~~~kiVISDIDGTITkSD~lG~il~~lG---kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~  142 (567)
                      ......+|++|+||||+         |++.   .....+...+..++++ +|+++.-+|||+.....
T Consensus       107 ~~~k~~llflD~DGTL~---------Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~  163 (366)
T PLN03017        107 SRGKQIVMFLDYDGTLS---------PIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVY  163 (366)
T ss_pred             hcCCCeEEEEecCCcCc---------CCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHH
Confidence            34455688899999999         1111   1135678888899999 88999999999986553

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=88.55  E-value=2  Score=48.79  Aligned_cols=105  Identities=14%  Similarity=0.239  Sum_probs=72.5

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  436 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G  436 (567)
                      +..+|..+.||++..-     +   .=+|-.+||+.++.+.++++||++.-+|+.+...+   +..++.     .+++  
T Consensus       384 g~~~~~~~~~~~~~g~-----~---~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a---~~ia~~-----lgi~--  445 (562)
T TIGR01511       384 GSTSVLVAVNGELAGV-----F---ALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTA---KAVAKE-----LGIN--  445 (562)
T ss_pred             CCEEEEEEECCEEEEE-----E---EecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHH-----cCCc--
Confidence            3455677778876432     1   11577899999999999999999999999876544   444445     4453  


Q ss_pred             ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        437 PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       437 Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                       ++       .    ++   .| .=|.+.++.++.    .... .+.+|+..+|+.|-+++||.
T Consensus       446 -~~-------~----~~---~p-~~K~~~v~~l~~----~~~~-v~~VGDg~nD~~al~~A~vg  488 (562)
T TIGR01511       446 -VR-------A----EV---LP-DDKAALIKELQE----KGRV-VAMVGDGINDAPALAQADVG  488 (562)
T ss_pred             -EE-------c----cC---Ch-HHHHHHHHHHHH----cCCE-EEEEeCCCccHHHHhhCCEE
Confidence             11       1    11   23 236777777766    2222 67899999999999999984

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR00685 T6PP trehalose-phosphatase

Probab=88.42  E-value=0.91  Score=45.63  Aligned_cols=51  Identities=16%  Similarity=0.259  Sum_probs=35.7

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHC-CceEEEEccCcc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN-GYKLLYLSARAI  413 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~n-GY~iiYLSaRpi  413 (567)
                      ...++++|+||||+...      +.-......+++.++.+++.+. +..+..+|||+.
T Consensus         2 ~~~~l~lD~DGTL~~~~------~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~   53 (244)
T TIGR00685         2 RKRAFFFDYDGTLSEIV------PDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKF   53 (244)
T ss_pred             CcEEEEEecCccccCCc------CCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCCh
Confidence            35679999999999631      0011123567899999988776 456678999965

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=87.89  E-value=2.2  Score=48.30  Aligned_cols=103  Identities=19%  Similarity=0.307  Sum_probs=71.6

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nG-Y~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      .++.+..||++...     +   .-+|-.+||+.++.++++++| |++.-+|+.+...+   +..++.     .++.+  
T Consensus       365 ~~~~v~~~~~~~g~-----i---~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a---~~i~~~-----lgi~~--  426 (556)
T TIGR01525       365 TVVFVAVDGELLGV-----I---ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAA---EAVAAE-----LGIDE--  426 (556)
T ss_pred             EEEEEEECCEEEEE-----E---EecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHH---HHHHHH-----hCCCe--
Confidence            44556677754432     2   236789999999999999999 99999999877655   555555     44431  


Q ss_pred             eecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        438 MLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       438 vl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                             .|.    ++   .| +-|.++++.++.    .. .-.+.+|+..+|+.|-+++||
T Consensus       427 -------~f~----~~---~p-~~K~~~v~~l~~----~~-~~v~~vGDg~nD~~al~~A~v  468 (556)
T TIGR01525       427 -------VHA----EL---LP-EDKLAIVKELQE----EG-GVVAMVGDGINDAPALAAADV  468 (556)
T ss_pred             -------eec----cC---CH-HHHHHHHHHHHH----cC-CEEEEEECChhHHHHHhhCCE
Confidence                   121    11   22 246677888776    12 247889999999999999995

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=87.08  E-value=2.3  Score=40.95  Aligned_cols=94  Identities=17%  Similarity=0.209  Sum_probs=56.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~  464 (567)
                      ..+|+.++.+.++++||++.-+|+.....+   +..|+.     .++..  --++.+.+ ..      .-.++|+.|+..
T Consensus        76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~---~~~l~~-----~~l~~~f~~i~~~~~-~~------~~KP~~~~~~~~  140 (205)
T TIGR01454        76 VFPGVPELLAELRADGVGTAIATGKSGPRA---RSLLEA-----LGLLPLFDHVIGSDE-VP------RPKPAPDIVREA  140 (205)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCchHHH---HHHHHH-----cCChhheeeEEecCc-CC------CCCCChHHHHHH
Confidence            457999999999999999999999765443   444544     23311  01222211 10      012334444433


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      + +.    +.-...- ..-+|++.+|+.+=+++|++.
T Consensus       141 ~-~~----~~~~~~~-~l~igD~~~Di~aA~~~Gi~~  171 (205)
T TIGR01454       141 L-RL----LDVPPED-AVMVGDAVTDLASARAAGTAT  171 (205)
T ss_pred             H-HH----cCCChhh-eEEEcCCHHHHHHHHHcCCeE
Confidence            2 22    2211111 356899999999999999984

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=86.99  E-value=1.2  Score=40.23  Aligned_cols=94  Identities=19%  Similarity=0.340  Sum_probs=57.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++.+.++++||++.-+|..+.   ...+..|+.+.-  ..+++        .++.+  -+.-..+|  +.|+..
T Consensus        78 ~~~~~~~~L~~l~~~~~~~~i~Sn~~~---~~~~~~l~~~~~--~~~f~--------~i~~~--~~~~~~Kp~~~~~~~~  142 (176)
T PF13419_consen   78 PYPGVRELLERLKAKGIPLVIVSNGSR---ERIERVLERLGL--DDYFD--------EIISS--DDVGSRKPDPDAYRRA  142 (176)
T ss_dssp             ESTTHHHHHHHHHHTTSEEEEEESSEH---HHHHHHHHHTTH--GGGCS--------EEEEG--GGSSSSTTSHHHHHHH
T ss_pred             hhhhhhhhhhhcccccceeEEeecCCc---cccccccccccc--ccccc--------ccccc--chhhhhhhHHHHHHHH
Confidence            577999999999999999999999864   444555555211  12232        22221  12222344  555433


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      + +.+ .+ ++ . - ..-+|++..|+.+=+++|+..
T Consensus       143 ~-~~~-~~-~p-~-~-~~~vgD~~~d~~~A~~~G~~~  173 (176)
T PF13419_consen  143 L-EKL-GI-PP-E-E-ILFVGDSPSDVEAAKEAGIKT  173 (176)
T ss_dssp             H-HHH-TS-SG-G-G-EEEEESSHHHHHHHHHTTSEE
T ss_pred             H-HHc-CC-Cc-c-e-EEEEeCCHHHHHHHHHcCCeE
Confidence            2 222 11 11 1 2 357899999999999999864

...

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=86.82  E-value=2.8  Score=40.72  Aligned_cols=95  Identities=14%  Similarity=0.124  Sum_probs=55.6

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-CccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~-~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      +|+.++...+++.||++.-+|+.+....   +..|+.+.=. +.-++  .++++.+ ..      ...++|+.|..++  
T Consensus        90 ~G~~~~L~~L~~~g~~~~ivT~~~~~~~---~~~l~~~~l~~~~~f~--~i~~~~~-~~------~~KP~p~~~~~a~--  155 (220)
T TIGR03351        90 PGAEEAFRSLRSSGIKVALTTGFDRDTA---ERLLEKLGWTVGDDVD--AVVCPSD-VA------AGRPAPDLILRAM--  155 (220)
T ss_pred             CCHHHHHHHHHHCCCEEEEEeCCchHHH---HHHHHHhhhhhhccCC--EEEcCCc-CC------CCCCCHHHHHHHH--
Confidence            5889999999999999999999766544   3344431100 01122  2444432 11      1234445454332  


Q ss_pred             HHHHhCCCC-CCCEEEecCCcccchhhhhhcCCCC
Q psy12533        193 DIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       193 ~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                         ..+.-. ... ..-+|++.+|+.+=+++|++.
T Consensus       156 ---~~~~~~~~~~-~~~igD~~~Di~aa~~aG~~~  186 (220)
T TIGR03351       156 ---ELTGVQDVQS-VAVAGDTPNDLEAGINAGAGA  186 (220)
T ss_pred             ---HHcCCCChhH-eEEeCCCHHHHHHHHHCCCCe
Confidence               222211 011 456778899999999999995

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK11590 hypothetical protein; Provisional

Probab=86.52  E-value=3.1  Score=40.83  Aligned_cols=110  Identities=11%  Similarity=0.122  Sum_probs=65.7

Q ss_pred             chhHHHHH-HHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccCh-hHHHHH
Q psy12533        388 QNGVTRLF-TKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKP-QEFKIS  464 (567)
Q Consensus       388 h~Gva~l~-~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k~p-~~fK~~  464 (567)
                      .|||.++. +++++.||+++-+|+.+...+.   ..+..     .++=.| .++.+.  +-.-+..++...+- -+=|..
T Consensus        97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~---~il~~-----l~~~~~~~~i~t~--l~~~~tg~~~g~~c~g~~K~~  166 (211)
T PRK11590         97 FPVVQERLTTYLLSSDADVWLITGSPQPLVE---QVYFD-----TPWLPRVNLIASQ--MQRRYGGWVLTLRCLGHEKVA  166 (211)
T ss_pred             CccHHHHHHHHHHhCCCEEEEEeCCcHHHHH---HHHHH-----ccccccCceEEEE--EEEEEccEECCccCCChHHHH
Confidence            47888888 5678899999999999876654   33333     111001 123222  10011112211111 344666


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  515 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  515 (567)
                      .|+...   +. ....+.+||+..+|.-+...||-|    +.|||+.++.+
T Consensus       167 ~l~~~~---~~-~~~~~~aY~Ds~~D~pmL~~a~~~----~~vnp~~~l~~  209 (211)
T PRK11590        167 QLERKI---GT-PLRLYSGYSDSKQDNPLLYFCQHR----WRVTPRGELQQ  209 (211)
T ss_pred             HHHHHh---CC-CcceEEEecCCcccHHHHHhCCCC----EEECccHHhhc
Confidence            555433   32 334456999999999999999977    68999877643

>TIGR00685 T6PP trehalose-phosphatase

Probab=86.50  E-value=1.3  Score=44.52  Aligned_cols=50  Identities=14%  Similarity=0.199  Sum_probs=35.6

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHC-CceEEEEccCcc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN-GYKLLYLSARAI  138 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~n-GY~ilYLSaRpi  138 (567)
                      ..++++|+||||+....      .-......+++.++.+.+.+. +..+..+|+|++
T Consensus         3 ~~~l~lD~DGTL~~~~~------~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~   53 (244)
T TIGR00685         3 KRAFFFDYDGTLSEIVP------DPDAAVVSDRLLTILQKLAARPHNAIWIISGRKF   53 (244)
T ss_pred             cEEEEEecCccccCCcC------CCcccCCCHHHHHHHHHHHhCCCCeEEEEECCCh
Confidence            45799999999996310      011224567899999998777 567779999964

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=85.54  E-value=1.7  Score=39.21  Aligned_cols=97  Identities=18%  Similarity=0.232  Sum_probs=56.9

Q ss_pred             ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        111 WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  190 (567)
Q Consensus       111 wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~  190 (567)
                      ...+|+.++.+.++++||++.-+|..+.   ...+..|+.+.-  ..+++        .++.+  -+....+|+   .++
T Consensus        77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~---~~~~~~l~~~~~--~~~f~--------~i~~~--~~~~~~Kp~---~~~  138 (176)
T PF13419_consen   77 QPYPGVRELLERLKAKGIPLVIVSNGSR---ERIERVLERLGL--DDYFD--------EIISS--DDVGSRKPD---PDA  138 (176)
T ss_dssp             EESTTHHHHHHHHHHTTSEEEEEESSEH---HHHHHHHHHTTH--GGGCS--------EEEEG--GGSSSSTTS---HHH
T ss_pred             chhhhhhhhhhhcccccceeEEeecCCc---cccccccccccc--ccccc--------ccccc--chhhhhhhH---HHH
Confidence            3456899999999999999999999863   444556655211  12232        22211  123334552   222


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      ++.+.+.+.-...- ..-+|++..|+.+=+++|+..
T Consensus       139 ~~~~~~~~~~~p~~-~~~vgD~~~d~~~A~~~G~~~  173 (176)
T PF13419_consen  139 YRRALEKLGIPPEE-ILFVGDSPSDVEAAKEAGIKT  173 (176)
T ss_dssp             HHHHHHHHTSSGGG-EEEEESSHHHHHHHHHTTSEE
T ss_pred             HHHHHHHcCCCcce-EEEEeCCHHHHHHHHHcCCeE
Confidence            33333222111112 457888899999999999864

...

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=85.37  E-value=0.89  Score=45.27  Aligned_cols=37  Identities=16%  Similarity=0.309  Sum_probs=22.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhc
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSV  426 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~  426 (567)
                      -.||.-++|..++++|-.++-+||   ||--..+..++++
T Consensus        74 Idp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~i  110 (220)
T COG4359          74 IDPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGI  110 (220)
T ss_pred             cCccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhh
Confidence            355666666667777777777776   3444445555544

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=85.04  E-value=4.7  Score=39.31  Aligned_cols=112  Identities=19%  Similarity=0.345  Sum_probs=67.6

Q ss_pred             CCeEEEEecCCccccCCcccccccccCc---CC-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGK---DW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  432 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~Gk---Dw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~  432 (567)
                      .-|++|+|||||+|.--.   ++.--|.   -+ +..|..  .+.|.+.|-++--+|+|.--..   +.   ++++  .+
T Consensus         7 ~IkLli~DVDGvLTDG~l---y~~~~Gee~KaFnv~DG~G--ik~l~~~Gi~vAIITGr~s~iv---e~---Ra~~--LG   73 (170)
T COG1778           7 NIKLLILDVDGVLTDGKL---YYDENGEEIKAFNVRDGHG--IKLLLKSGIKVAIITGRDSPIV---EK---RAKD--LG   73 (170)
T ss_pred             hceEEEEeccceeecCeE---EEcCCCceeeeeeccCcHH--HHHHHHcCCeEEEEeCCCCHHH---HH---HHHH--cC
Confidence            458899999999996421   1222232   22 555543  3458899999999999965443   22   2222  33


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        433 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       433 lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      ++.         ++    .-+      .=|.+++.+|+.-..-...- .|-.|+-.+|.-+.+++|++-
T Consensus        74 I~~---------~~----qG~------~dK~~a~~~L~~~~~l~~e~-~ayiGDD~~Dlpvm~~vGls~  122 (170)
T COG1778          74 IKH---------LY----QGI------SDKLAAFEELLKKLNLDPEE-VAYVGDDLVDLPVMEKVGLSV  122 (170)
T ss_pred             Cce---------ee----ech------HhHHHHHHHHHHHhCCCHHH-hhhhcCccccHHHHHHcCCcc
Confidence            431         11    111      11677777766532211111 356788899999999999984

>PLN02151 trehalose-phosphatase

Probab=85.02  E-value=1.5  Score=47.42  Aligned_cols=53  Identities=13%  Similarity=0.259  Sum_probs=38.0

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  416 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa  416 (567)
                      ...++++|+||||+-      |.+.-..-..+++..+..+.+. ++..+.-+|||+....
T Consensus        97 ~~~ll~lDyDGTL~P------Iv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l  149 (354)
T PLN02151         97 KQIVMFLDYDGTLSP------IVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKV  149 (354)
T ss_pred             CceEEEEecCccCCC------CCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHH
Confidence            445688999999982      1111112236788999999999 5679999999987554

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=85.00  E-value=3.9  Score=42.90  Aligned_cols=127  Identities=17%  Similarity=0.227  Sum_probs=74.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC--CCCce-----ecCCCchhhhhhhhhhccChh
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL--PEGPM-----LLNPTSLLNAFHTEVIEKKPQ  459 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l--P~GPv-----l~spd~l~~al~rEvi~k~p~  459 (567)
                      ..||+.+++..++++|+++.-+||=..   ...+..|+.     .++  |.-++     .++.++...++.-.+++.   
T Consensus       122 l~pG~~efl~~L~~~GIpv~IvS~G~~---~~Ie~vL~~-----lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~---  190 (277)
T TIGR01544       122 LKDGYENFFDKLQQHSIPVFIFSAGIG---NVLEEVLRQ-----AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHT---  190 (277)
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEeCCcH---HHHHHHHHH-----cCCCCcCceEEeeeEEECCCCeEeCCCCCcccc---
Confidence            578999999999999999999998443   555666665     333  44444     123444443332222221   


Q ss_pred             HHHHHH-HHHHHhhCC---CCCCCEEEecCCCcccHHhHHHcCCCC-CCEEEEcCCCcccccccccccccHhhHHhhh
Q psy12533        460 EFKISC-LRDIMALFP---PNTQPFYAGYGNKVNDVWSYQAVGIPL-SRIFTINSRGEVKHEMTQTFQSTYSNMSYLV  532 (567)
Q Consensus       460 ~fK~~~-L~~i~~lf~---~~~~pf~agfGNr~tDv~aY~~vGIp~-~rIF~In~~g~~~~~~~~~~~~sY~~l~~~v  532 (567)
                      -=|.+. +...+..|.   ...+  .-.+|+..+|+.|  +-|||. ++|..||=--+-.    ....+.|...-|+|
T Consensus       191 ~~K~~~v~~~~~~~~~~~~~~~~--vI~vGDs~~Dl~m--a~g~~~~~~~l~igfln~~~----e~~l~~y~~~~Div  260 (277)
T TIGR01544       191 FNKNHDVALRNTEYFNQLKDRSN--IILLGDSQGDLRM--ADGVANVEHILKIGYLNDRV----DELLEKYMDSYDIV  260 (277)
T ss_pred             cccHHHHHHHHHHHhCccCCcce--EEEECcChhhhhH--hcCCCcccceEEEEecccCH----HHHHHHHHHhCCEE
Confidence            113333 323334332   1123  3489999999999  789965 6777776532222    22346666666655

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine

Probab=84.57  E-value=2.7  Score=41.35  Aligned_cols=78  Identities=21%  Similarity=0.401  Sum_probs=48.3

Q ss_pred             EEecCCccccCCccc-c--cccccCcCCc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-Cc
Q psy12533        362 ISDIDGTITKSDVLG-H--VLPIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DL  431 (567)
Q Consensus       362 IsDIDGTiTkSD~~G-~--~~~~~GkDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~-~~  431 (567)
                      +-|.+|+++-+|..| .  ++-..-.+|+      .+..++++.++++.|.+++-+|.-+.   ...++|++.+++. ++
T Consensus        10 ~~~~~g~~~l~d~~g~k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~D~~---~~~~~~~~~i~~~~~~   86 (203)
T cd03016          10 ADTTHGPIKFHDYLGDSWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSVDSV---ESHIKWIEDIEEYTGV   86 (203)
T ss_pred             EecCCCcEeHHHHcCCCEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEECCCH---HHHHHHHhhHHHhcCC
Confidence            345667777777666 2  1222344553      34677889999999999999997653   3446677766552 13


Q ss_pred             cCCCCceecCCC
Q psy12533        432 TLPEGPMLLNPT  443 (567)
Q Consensus       432 ~lP~GPvl~spd  443 (567)
                      ++| -|++..++
T Consensus        87 ~~~-fpil~D~~   97 (203)
T cd03016          87 EIP-FPIIADPD   97 (203)
T ss_pred             CCc-eeEEECch
Confidence            443 35665443

They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=84.52  E-value=3.2  Score=43.49  Aligned_cols=129  Identities=18%  Similarity=0.267  Sum_probs=72.8

Q ss_pred             ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC--CCCcee-----cCCCchhhhhhhhhhccCh
Q psy12533        111 WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL--PEGPML-----LNPTSLLNAFHTEVIEKKP  183 (567)
Q Consensus       111 wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L--P~GPll-----lsp~~l~~al~REvi~k~p  183 (567)
                      -..+|+.+|+..++++|.++.-+||   |.....+..|+.     .++  |..+++     .+.++...++.-.++..  
T Consensus       121 ~l~pG~~efl~~L~~~GIpv~IvS~---G~~~~Ie~vL~~-----lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~--  190 (277)
T TIGR01544       121 MLKDGYENFFDKLQQHSIPVFIFSA---GIGNVLEEVLRQ-----AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHT--  190 (277)
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHH-----cCCCCcCceEEeeeEEECCCCeEeCCCCCcccc--
Confidence            3467999999999999999999999   555666666765     233  333331     22233322221111111  


Q ss_pred             hHHHHHH-HHHHHHhCC--CCCCCEEEecCCcccchhhhhhcCCCC-CCEEEEcCCCceeccccccccccHHhHHhhh
Q psy12533        184 QEFKISC-LRDIMALFP--PNTQPFYAGYGNKVNDVWSYQAVGIPL-SRIFTINSRGEVKHEMTQTFQSTYSNMSYLV  257 (567)
Q Consensus       184 ~~fKi~~-L~~i~~lf~--~~~~pf~agfGNr~tDv~aY~~vGIp~-~rIF~In~~g~~~~~~~~~~~~sY~~l~~~v  257 (567)
                       .=|.+. +...+..|.  ....- ...+|+..+|+.|  +-|||. ++|..|+=--+-    .....+.|...-|+|
T Consensus       191 -~~K~~~v~~~~~~~~~~~~~~~~-vI~vGDs~~Dl~m--a~g~~~~~~~l~igfln~~----~e~~l~~y~~~~Div  260 (277)
T TIGR01544       191 -FNKNHDVALRNTEYFNQLKDRSN-IILLGDSQGDLRM--ADGVANVEHILKIGYLNDR----VDELLEKYMDSYDIV  260 (277)
T ss_pred             -cccHHHHHHHHHHHhCccCCcce-EEEECcChhhhhH--hcCCCcccceEEEEecccC----HHHHHHHHHHhCCEE
Confidence             014443 223444432  11222 4589999999998  789965 677666542111    122346676666655

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=84.48  E-value=6.1  Score=44.64  Aligned_cols=87  Identities=18%  Similarity=0.238  Sum_probs=63.8

Q ss_pred             CcCCcchhHHHHHHHHHHCCc-eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHH
Q psy12533        383 GKDWAQNGVTRLFTKIKENGY-KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEF  461 (567)
Q Consensus       383 GkDw~h~Gva~l~~~i~~nGY-~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~f  461 (567)
                      -+|...+|+.++.+.++++|+ ++.-+|+.+...+   +..++.     .++++         .|.    ++   .| .-
T Consensus       359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a---~~i~~~-----lgi~~---------~f~----~~---~p-~~  413 (536)
T TIGR01512       359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVA---ERVARE-----LGIDE---------VHA----EL---LP-ED  413 (536)
T ss_pred             EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHH---HHHHHH-----cCChh---------hhh----cc---Cc-HH
Confidence            367889999999999999999 9999999866444   666666     44531         221    11   12 23


Q ss_pred             HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                      |.+.++.++.    ... -.+.+|+..+|+.|-+++|+
T Consensus       414 K~~~i~~l~~----~~~-~v~~vGDg~nD~~al~~A~v  446 (536)
T TIGR01512       414 KLEIVKELRE----KYG-PVAMVGDGINDAPALAAADV  446 (536)
T ss_pred             HHHHHHHHHh----cCC-EEEEEeCCHHHHHHHHhCCE
Confidence            6778888776    233 36789999999999999996

.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=84.46  E-value=4.8  Score=39.79  Aligned_cols=122  Identities=14%  Similarity=0.190  Sum_probs=75.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC-----C-CchhhhhhhhhhccChhH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN-----P-TSLLNAFHTEVIEKKPQE  185 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPllls-----p-~~l~~al~REvi~k~p~~  185 (567)
                      ..+|+.++...++++| ++.-+|+-..   ..++..++.     .+++.  ++.+     . +.+.    .+.+..  -.
T Consensus        69 l~pga~ell~~lk~~~-~~~IVS~~~~---~~~~~il~~-----lgi~~--~~an~l~~~~~g~~t----G~~~~~--~~  131 (203)
T TIGR02137        69 PLEGAVEFVDWLRERF-QVVILSDTFY---EFSQPLMRQ-----LGFPT--LLCHKLEIDDSDRVV----GYQLRQ--KD  131 (203)
T ss_pred             CCccHHHHHHHHHhCC-eEEEEeCChH---HHHHHHHHH-----cCCch--hhceeeEEecCCeeE----CeeecC--cc
Confidence            4679999999999986 9999999544   455556655     44431  2211     1 1111    111111  12


Q ss_pred             HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccc-cccccHHhHHhhhhh
Q psy12533        186 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQ-TFQSTYSNMSYLVDQ  259 (567)
Q Consensus       186 fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~-~~~~sY~~l~~~vd~  259 (567)
                      -|.+.++.++..    ... ..++|+..+|+.+.+.+|++.    .++++-.+.....+ ...++|..|-+..+.
T Consensus       132 ~K~~~l~~l~~~----~~~-~v~vGDs~nDl~ml~~Ag~~i----a~~ak~~~~~~~~~~~~~~~~~~~~~~~~~  197 (203)
T TIGR02137       132 PKRQSVIAFKSL----YYR-VIAAGDSYNDTTMLSEAHAGI----LFHAPENVIREFPQFPAVHTYEDLKREFLK  197 (203)
T ss_pred             hHHHHHHHHHhh----CCC-EEEEeCCHHHHHHHHhCCCCE----EecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence            478888877654    223 668999999999999999885    34555334332222 345778877776654

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE

Probab=84.35  E-value=5  Score=36.40  Aligned_cols=33  Identities=12%  Similarity=0.195  Sum_probs=25.4

Q ss_pred             hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        115 GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus       115 GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      ..++++.++.++|.+++-+|.-+   .+..++|++.
T Consensus        50 ~l~~~~~~~~~~~v~vi~vs~d~---~~~~~~~~~~   82 (149)
T cd03018          50 ALRDSLELFEAAGAEVLGISVDS---PFSLRAWAEE   82 (149)
T ss_pred             HHHHHHHHHHhCCCEEEEecCCC---HHHHHHHHHh
Confidence            56688888888999999998754   3456778766

AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.

>cd03017 PRX_BCP Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides

Probab=84.30  E-value=7.9  Score=34.61  Aligned_cols=61  Identities=20%  Similarity=0.292  Sum_probs=38.6

Q ss_pred             EEecCCc-cccCCccccc-ccccc-cccc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         87 ISDIDGT-ITKSDVLGHV-LPIMG-KDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        87 ISDIDGT-ITkSD~lG~i-l~~lG-kDwt------h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      +-|++|. ++-++..|.. +-.+. ..|.      -+...+++.++++.|..|+-+|..+   .+..++|++.
T Consensus         8 l~~~~g~~~~l~~~~gk~~ll~f~~~~~cp~C~~~~~~l~~~~~~~~~~~~~vv~is~d~---~~~~~~~~~~   77 (140)
T cd03017           8 LPDQDGETVSLSDLRGKPVVLYFYPKDDTPGCTKEACDFRDLYEEFKALGAVVIGVSPDS---VESHAKFAEK   77 (140)
T ss_pred             ccCCCCCEEeHHHhCCCcEEEEEeCCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHH
Confidence            3466663 5666666653 11122 2332      2356678888888999999999753   4556778776

The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), w

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=84.04  E-value=1.9  Score=44.16  Aligned_cols=45  Identities=18%  Similarity=0.467  Sum_probs=35.4

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAI  138 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi  138 (567)
                      ..++|-.|||||+..-          |.+|-  -++..+..+++.||+++.|||...
T Consensus         6 ~~~lIFtDlD~TLl~~----------~ye~~--pA~pv~~el~d~G~~Vi~~SSKT~   50 (274)
T COG3769           6 MPLLIFTDLDGTLLPH----------SYEWQ--PAAPVLLELKDAGVPVILCSSKTR   50 (274)
T ss_pred             cceEEEEcccCcccCC----------CCCCC--ccchHHHHHHHcCCeEEEeccchH
Confidence            3467888999999862          34553  367889999999999999999654

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=83.94  E-value=2.6  Score=43.20  Aligned_cols=47  Identities=17%  Similarity=0.463  Sum_probs=36.5

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ  415 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~q  415 (567)
                      ...+|-.|||||+..-          |.+|-  -++.++..+++.||.||.||+...--
T Consensus         6 ~~~lIFtDlD~TLl~~----------~ye~~--pA~pv~~el~d~G~~Vi~~SSKT~aE   52 (274)
T COG3769           6 MPLLIFTDLDGTLLPH----------SYEWQ--PAAPVLLELKDAGVPVILCSSKTRAE   52 (274)
T ss_pred             cceEEEEcccCcccCC----------CCCCC--ccchHHHHHHHcCCeEEEeccchHHH
Confidence            4567888999999752          45653  25678999999999999999976543

>PLN02151 trehalose-phosphatase

Probab=83.83  E-value=1.7  Score=46.97  Aligned_cols=58  Identities=14%  Similarity=0.216  Sum_probs=41.2

Q ss_pred             EEecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533         77 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  141 (567)
Q Consensus        77 ylw~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a  141 (567)
                      .+......++++|+||||+.      |.+.-.....+++..+..+.+. ++..+.-+|+|+....
T Consensus        92 ~~~~~~~~ll~lDyDGTL~P------Iv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l  149 (354)
T PLN02151         92 HKSEGKQIVMFLDYDGTLSP------IVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKV  149 (354)
T ss_pred             HhhcCCceEEEEecCccCCC------CCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHH
Confidence            33444556899999999992      2222223356778999999999 5679999999987544

>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine

Probab=83.76  E-value=4.6  Score=39.74  Aligned_cols=133  Identities=17%  Similarity=0.308  Sum_probs=77.0

Q ss_pred             EEEecCCccccCCccc-c--ccccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC-
Q psy12533         86 VISDIDGTITKSDVLG-H--VLPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED-  155 (567)
Q Consensus        86 VISDIDGTITkSD~lG-~--il~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~-  155 (567)
                      .+-|.+|+++-+|..| .  ++-..-.+|+-.      ..++++.++++.|.+++-+|.-+.   ...++|++.+++.. 
T Consensus         9 ~~~~~~g~~~l~d~~g~k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~D~~---~~~~~~~~~i~~~~~   85 (203)
T cd03016           9 EADTTHGPIKFHDYLGDSWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSVDSV---ESHIKWIEDIEEYTG   85 (203)
T ss_pred             EEecCCCcEeHHHHcCCCEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEECCCH---HHHHHHHhhHHHhcC
Confidence            3446677777777777 3  232344555544      677889999999999999997653   44466777665521 


Q ss_pred             ccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCC
Q psy12533        156 LTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  235 (567)
Q Consensus       156 ~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  235 (567)
                      .++| -|++..+++.+                       ...|.           -...+    ...+.+.--+|+||++
T Consensus        86 ~~~~-fpil~D~~~~i-----------------------a~~yg-----------~~~~~----~~~~~~~r~~fiID~~  126 (203)
T cd03016          86 VEIP-FPIIADPDREV-----------------------AKLLG-----------MIDPD----AGSTLTVRAVFIIDPD  126 (203)
T ss_pred             CCCc-eeEEECchHHH-----------------------HHHcC-----------Ccccc----CCCCceeeEEEEECCC
Confidence            3444 35665554222                       11111           00000    0112233458999999


Q ss_pred             Cceecccccc--ccccHHhHHhhhhhc
Q psy12533        236 GEVKHEMTQT--FQSTYSNMSYLVDQM  260 (567)
Q Consensus       236 g~~~~~~~~~--~~~sY~~l~~~vd~~  260 (567)
                      |+|+......  .-.+...|-+.++.+
T Consensus       127 G~I~~~~~~~~~~gr~~~ell~~l~~l  153 (203)
T cd03016         127 KKIRLILYYPATTGRNFDEILRVVDAL  153 (203)
T ss_pred             CeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence            9998654321  123567777777664

They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=83.75  E-value=3.7  Score=39.55  Aligned_cols=94  Identities=20%  Similarity=0.281  Sum_probs=55.8

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~  189 (567)
                      ..+|+.++.+.++++||++.-+|+.....   ++..|+.     .++..  --++.+.+         +...+|   +-+
T Consensus        76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~---~~~~l~~-----~~l~~~f~~i~~~~~---------~~~~KP---~~~  135 (205)
T TIGR01454        76 VFPGVPELLAELRADGVGTAIATGKSGPR---ARSLLEA-----LGLLPLFDHVIGSDE---------VPRPKP---APD  135 (205)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCchHH---HHHHHHH-----cCChhheeeEEecCc---------CCCCCC---ChH
Confidence            35699999999999999999999975444   3445544     22211  01222221         122344   223


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      ++..+...+.-...- ..-+|++.+|+.+=+++|++.
T Consensus       136 ~~~~~~~~~~~~~~~-~l~igD~~~Di~aA~~~Gi~~  171 (205)
T TIGR01454       136 IVREALRLLDVPPED-AVMVGDAVTDLASARAAGTAT  171 (205)
T ss_pred             HHHHHHHHcCCChhh-eEEEcCCHHHHHHHHHcCCeE
Confidence            333333333211111 456889999999999999984

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=83.33  E-value=3.8  Score=42.04  Aligned_cols=93  Identities=12%  Similarity=0.191  Sum_probs=57.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      .+|+.++...++++||++.-+|+.+...+   +..|+.     ++|..  --++.+.+ ..      ...++|+.|..++
T Consensus       111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~---~~~l~~-----~gl~~~Fd~ii~~~d-~~------~~KP~Pe~~~~a~  175 (260)
T PLN03243        111 RPGSREFVQALKKHEIPIAVASTRPRRYL---ERAIEA-----VGMEGFFSVVLAAED-VY------RGKPDPEMFMYAA  175 (260)
T ss_pred             CCCHHHHHHHHHHCCCEEEEEeCcCHHHH---HHHHHH-----cCCHhhCcEEEeccc-CC------CCCCCHHHHHHHH
Confidence            47899999999999999999999876444   444544     23221  11222221 10      1244567776554


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                       +.+ .+-|  ..  ...+|++.+|+.|=+++|+..
T Consensus       176 -~~l-~~~p--~~--~l~IgDs~~Di~aA~~aG~~~  205 (260)
T PLN03243        176 -ERL-GFIP--ER--CIVFGNSNSSVEAAHDGCMKC  205 (260)
T ss_pred             -HHh-CCCh--HH--eEEEcCCHHHHHHHHHcCCEE
Confidence             222 1111  11  346999999999999999963

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=83.29  E-value=4.8  Score=40.13  Aligned_cols=123  Identities=20%  Similarity=0.339  Sum_probs=77.9

Q ss_pred             cEEEEecCCccccCCc---ccc---------------ccccccccccch-----hHHHHHHHHHHCCceEEEEccCcccc
Q psy12533         84 KIVISDIDGTITKSDV---LGH---------------VLPIMGKDWAQN-----GVTRLFTKIKENGYKLLYLSARAIGQ  140 (567)
Q Consensus        84 kiVISDIDGTITkSD~---lG~---------------il~~lGkDwth~-----GVa~Ly~~i~~nGY~ilYLSaRpi~~  140 (567)
                      -.|-||||.|+.=|.-   .|.               ++..+.+-|-.-     -+.+|-.+=++.|=+|.|+|+|.-+-
T Consensus        64 i~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk  143 (237)
T COG3700          64 IAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGK  143 (237)
T ss_pred             eeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence            3699999999987654   332               122333333322     23356666678899999999998887


Q ss_pred             hHHHHHHHHhcccCCccC-CCCceecCCCchhhhhhhhhhccChhH-HHHHHHHHHHHhCCCCCCCEEEecCCcccchhh
Q psy12533        141 SRVTREYLQSVKQEDLTL-PEGPMLLNPTSLLNAFHTEVIEKKPQE-FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS  218 (567)
Q Consensus       141 a~~Tr~~L~~~~q~~~~L-P~GPlllsp~~l~~al~REvi~k~p~~-fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~a  218 (567)
                      .+.+-.-|..    .+.+ -+-||....|           ..+|.. -|..+|.+   .     + .--=||+.++|+.|
T Consensus       144 ~d~vsk~Lak----~F~i~~m~pv~f~Gd-----------k~k~~qy~Kt~~i~~---~-----~-~~IhYGDSD~Di~A  199 (237)
T COG3700         144 TDTVSKTLAK----NFHITNMNPVIFAGD-----------KPKPGQYTKTQWIQD---K-----N-IRIHYGDSDNDITA  199 (237)
T ss_pred             ccccchhHHh----hcccCCCcceeeccC-----------CCCcccccccHHHHh---c-----C-ceEEecCCchhhhH
Confidence            7777666653    1222 1234554433           113444 46666544   1     1 13358999999999


Q ss_pred             hhhcCCCCCCEE
Q psy12533        219 YQAVGIPLSRIF  230 (567)
Q Consensus       219 Y~~vGIp~~rIF  230 (567)
                      =+++|+-.=||.
T Consensus       200 AkeaG~RgIRil  211 (237)
T COG3700         200 AKEAGARGIRIL  211 (237)
T ss_pred             HHhcCccceeEE
Confidence            999999887774

>PRK10671 copA copper exporting ATPase; Provisional

Probab=83.23  E-value=5.4  Score=47.47  Aligned_cols=103  Identities=16%  Similarity=0.269  Sum_probs=71.4

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      .+|..-+||++.     |.+   .-.|..++|+.++...+++.||++.-+|+...-.+   +..++.     .++++   
T Consensus       631 ~~v~va~~~~~~-----g~~---~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a---~~ia~~-----lgi~~---  691 (834)
T PRK10671        631 TPVLLAVDGKAA-----ALL---AIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTA---NAIAKE-----AGIDE---  691 (834)
T ss_pred             eEEEEEECCEEE-----EEE---EccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCCE---
Confidence            445555666532     222   12688899999999999999999999999776554   444444     44542   


Q ss_pred             ecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        439 LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       439 l~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                            .+.    ++   .|+ -|.++++.++.    ... -.+.+|+..+|+.|-+++|+
T Consensus       692 ------~~~----~~---~p~-~K~~~i~~l~~----~~~-~v~~vGDg~nD~~al~~Agv  733 (834)
T PRK10671        692 ------VIA----GV---LPD-GKAEAIKRLQS----QGR-QVAMVGDGINDAPALAQADV  733 (834)
T ss_pred             ------EEe----CC---CHH-HHHHHHHHHhh----cCC-EEEEEeCCHHHHHHHHhCCe
Confidence                  111    11   244 38889998876    222 36899999999999999988

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=82.93  E-value=2.7  Score=40.02  Aligned_cols=62  Identities=18%  Similarity=0.337  Sum_probs=43.1

Q ss_pred             eEEEEecCCccccCCcccc-----c-ccc-cC-c--C---CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHH
Q psy12533        359 KIVISDIDGTITKSDVLGH-----V-LPI-MG-K--D---WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTRE  421 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~-----~-~~~-~G-k--D---w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~  421 (567)
                      +.+|.|+|+|+-.|...-.     + ++. .+ +  .   +.+||+.++...++++ |.|+-.|+-+...|+..-+
T Consensus         2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~   76 (162)
T TIGR02251         2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLD   76 (162)
T ss_pred             cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHH
Confidence            5799999999997743210     0 111 11 0  1   4799999999999998 9999888877666644333

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=82.74  E-value=2.3  Score=39.74  Aligned_cols=93  Identities=12%  Similarity=0.200  Sum_probs=54.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..||+.++.+.++++||++.-+|++     ...+..|+...-  ..+.+ -++.+.+       ...-.++|+.|... +
T Consensus        89 ~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l--~~~f~-~v~~~~~-------~~~~kp~~~~~~~~-~  152 (185)
T TIGR02009        89 VLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGL--TDYFD-AIVDADE-------VKEGKPHPETFLLA-A  152 (185)
T ss_pred             CCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcCh--HHHCC-Eeeehhh-------CCCCCCChHHHHHH-H
Confidence            5789999999999999999999987     234555655111  11111 1221111       11123345555432 3


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +.+. + ++ ...  ..+|++..|+.+=+++|++
T Consensus       153 ~~~~-~-~~-~~~--v~IgD~~~di~aA~~~G~~  181 (185)
T TIGR02009       153 ELLG-V-SP-NEC--VVFEDALAGVQAARAAGMF  181 (185)
T ss_pred             HHcC-C-CH-HHe--EEEeCcHhhHHHHHHCCCe
Confidence            3221 1 11 222  3579999999999999996

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR02540 gpx7 putative glutathione peroxidase Gpx7

Probab=82.28  E-value=10  Score=35.13  Aligned_cols=62  Identities=15%  Similarity=0.248  Sum_probs=39.3

Q ss_pred             EecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcc-----cchHHHHHHHH
Q psy12533         88 SDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAI-----GQSRVTREYLQ  149 (567)
Q Consensus        88 SDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi-----~~a~~Tr~~L~  149 (567)
                      -|.|| |++.|+..|.. +-..-..|..+      ...+++++++++|..|+-+++...     .-.+..++|++
T Consensus         8 ~~~~G~~~~l~~~~Gk~vvv~~~as~C~~c~~~~~~l~~l~~~~~~~~~~v~~i~~~~~~~~~~d~~~~~~~f~~   82 (153)
T TIGR02540         8 KDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESFAR   82 (153)
T ss_pred             ECCCCCEecHHHhCCCEEEEEEeCCCCCchhhhHHHHHHHHHHHhhCCeEEEEEeccccccCCCCCHHHHHHHHH
Confidence            46777 77778888874 21222334333      455889999999999999986422     22345566664

This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=81.58  E-value=4.3  Score=38.46  Aligned_cols=90  Identities=23%  Similarity=0.332  Sum_probs=60.2

Q ss_pred             CcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHH
Q psy12533        383 GKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFK  462 (567)
Q Consensus       383 GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK  462 (567)
                      -.|..++|+.++.+.+++.|+++.-+|+....-+   +...+.     .++++.-       .++    ++. .+| .-|
T Consensus       124 ~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a---~~~~~~-----lgi~~~~-------v~a----~~~-~kP-~~k  182 (215)
T PF00702_consen  124 LRDPLRPGAKEALQELKEAGIKVAILTGDNESTA---SAIAKQ-----LGIFDSI-------VFA----RVI-GKP-EPK  182 (215)
T ss_dssp             EEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHH---HHHHHH-----TTSCSEE-------EEE----SHE-TTT-HHH
T ss_pred             ecCcchhhhhhhhhhhhccCcceeeeeccccccc---cccccc-----ccccccc-------ccc----ccc-ccc-cch
Confidence            3677899999999999999999999998776655   444444     4553211       111    010 345 224


Q ss_pred             --HHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcC
Q psy12533        463 --ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVG  498 (567)
Q Consensus       463 --~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vG  498 (567)
                        ..+++.++.    .... ++.+|+..||+.|=+++|
T Consensus       183 ~~~~~i~~l~~----~~~~-v~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  183 IFLRIIKELQV----KPGE-VAMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             HHHHHHHHHTC----TGGG-EEEEESSGGHHHHHHHSS
T ss_pred             hHHHHHHHHhc----CCCE-EEEEccCHHHHHHHHhCc
Confidence              555666552    1233 689999999999999886

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=81.56  E-value=6.4  Score=44.84  Aligned_cols=103  Identities=15%  Similarity=0.237  Sum_probs=70.4

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      .+|..+.||++..-     +   .=+|-.++|+.++.+.++++|+++.-+|+.+...+   +..++.     .+++   +
T Consensus       386 ~~~~~~~~~~~~g~-----~---~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a---~~ia~~-----lgi~---~  446 (562)
T TIGR01511       386 TSVLVAVNGELAGV-----F---ALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTA---KAVAKE-----LGIN---V  446 (562)
T ss_pred             EEEEEEECCEEEEE-----E---EecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHH-----cCCc---E
Confidence            45666777765422     1   01567899999999999999999999999876544   445554     4443   1


Q ss_pred             ecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        164 LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       164 llsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      +       .    ++   .| +=|.+.++.++..    .. -++-+|+..+|+.|-+++||.
T Consensus       447 ~-------~----~~---~p-~~K~~~v~~l~~~----~~-~v~~VGDg~nD~~al~~A~vg  488 (562)
T TIGR01511       447 R-------A----EV---LP-DDKAALIKELQEK----GR-VVAMVGDGINDAPALAQADVG  488 (562)
T ss_pred             E-------c----cC---Ch-HHHHHHHHHHHHc----CC-EEEEEeCCCccHHHHhhCCEE
Confidence            1       1    11   23 2367777777662    22 377899999999999999974

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=81.51  E-value=6.5  Score=44.54  Aligned_cols=103  Identities=19%  Similarity=0.292  Sum_probs=70.5

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nG-Y~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      .++....||+...     .+   .-+|-.++|+.++.+.++++| |++.-+|+.+...+   +..++.     .++.+  
T Consensus       365 ~~~~v~~~~~~~g-----~i---~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a---~~i~~~-----lgi~~--  426 (556)
T TIGR01525       365 TVVFVAVDGELLG-----VI---ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAA---EAVAAE-----LGIDE--  426 (556)
T ss_pred             EEEEEEECCEEEE-----EE---EecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHH---HHHHHH-----hCCCe--
Confidence            3455666664332     22   236788999999999999999 99999999877554   555555     44421  


Q ss_pred             eecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533        163 MLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  224 (567)
Q Consensus       163 lllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  224 (567)
                             .|.    ++   .| +-|.+.++.++..     ..-++.+|++.+|+.|-+++||
T Consensus       427 -------~f~----~~---~p-~~K~~~v~~l~~~-----~~~v~~vGDg~nD~~al~~A~v  468 (556)
T TIGR01525       427 -------VHA----EL---LP-EDKLAIVKELQEE-----GGVVAMVGDGINDAPALAAADV  468 (556)
T ss_pred             -------eec----cC---CH-HHHHHHHHHHHHc-----CCEEEEEECChhHHHHHhhCCE
Confidence                   121    11   22 2467778887763     2247889999999999999995

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=81.46  E-value=3.4  Score=39.29  Aligned_cols=64  Identities=17%  Similarity=0.318  Sum_probs=44.2

Q ss_pred             cEEEEecCCccccCCccc-c----c-cc-cccc------cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533         84 KIVISDIDGTITKSDVLG-H----V-LP-IMGK------DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  148 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG-~----i-l~-~lGk------Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L  148 (567)
                      +.+|.|+|+|+-.|...- .    + .+ ..+.      =+-+||+.++...++++ |.|+-.|+-+-..|+..-+.|
T Consensus         2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l   78 (162)
T TIGR02251         2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL   78 (162)
T ss_pred             cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH
Confidence            579999999999774421 1    0 11 0110      15789999999999998 999999997766555444433

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PTZ00056 glutathione peroxidase; Provisional

Probab=81.09  E-value=11  Score=37.24  Aligned_cols=65  Identities=14%  Similarity=0.284  Sum_probs=42.8

Q ss_pred             EEEecCC-ccccCCccccc-cccccccccc------hhHHHHHHHHHHCCceEEEEccCc-----ccchHHHHHHHHh
Q psy12533         86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARA-----IGQSRVTREYLQS  150 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i-l~~lGkDwth------~GVa~Ly~~i~~nGY~ilYLSaRp-----i~~a~~Tr~~L~~  150 (567)
                      -+-|+|| +++.++..|.. +-..-..|.-      +...+|+++++++|..|+-++...     ..-.+..+.|++.
T Consensus        23 ~l~d~~G~~vsL~~~kGkvvlv~fwAswC~~C~~e~p~L~~l~~~~~~~g~~vvgv~~~~~~~~e~d~~e~~~~f~~~  100 (199)
T PTZ00056         23 TVKTLEGTTVPMSSLKNKVLMITNSASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTSQFLNQEFPNTKDIRKFNDK  100 (199)
T ss_pred             EEECCCCCEEeHHHhCCCEEEEEEECCCCCChHHHHHHHHHHHHHHhcCceEEEEecchhccCCCCCCHHHHHHHHHH
Confidence            3457777 46767777765 2222234542      366789999999999999998642     1234667788766

>PRK11590 hypothetical protein; Provisional

Probab=80.96  E-value=5.4  Score=39.15  Aligned_cols=110  Identities=11%  Similarity=0.059  Sum_probs=63.8

Q ss_pred             chhHHHHH-HHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhcc-ChhHHHHHH
Q psy12533        113 QNGVTRLF-TKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEK-KPQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly-~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k-~p~~fKi~~  190 (567)
                      .+||.++. +.+++.||++.-+||.+...+...-..+..  +.   ..  .++.+.  +-.-+..++... -.-+=|...
T Consensus        97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~--~~---~~--~~i~t~--l~~~~tg~~~g~~c~g~~K~~~  167 (211)
T PRK11590         97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPW--LP---RV--NLIASQ--MQRRYGGWVLTLRCLGHEKVAQ  167 (211)
T ss_pred             CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccc--cc---cC--ceEEEE--EEEEEccEECCccCCChHHHHH
Confidence            36888888 567788999999999887665433333321  00   01  122222  100011111111 111236655


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCcee
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK  239 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~  239 (567)
                      |+..   ++. ...-+.+||+..+|.-+...||-|    +.|||+.++.
T Consensus       168 l~~~---~~~-~~~~~~aY~Ds~~D~pmL~~a~~~----~~vnp~~~l~  208 (211)
T PRK11590        168 LERK---IGT-PLRLYSGYSDSKQDNPLLYFCQHR----WRVTPRGELQ  208 (211)
T ss_pred             HHHH---hCC-CcceEEEecCCcccHHHHHhCCCC----EEECccHHhh
Confidence            5543   332 344567999999999999999977    7899987664

>KOG1615|consensus

Probab=80.94  E-value=4.4  Score=40.84  Aligned_cols=124  Identities=15%  Similarity=0.167  Sum_probs=78.6

Q ss_pred             cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC-----CceecCCCchhhhhhhhhhccChh
Q psy12533        110 DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE-----GPMLLNPTSLLNAFHTEVIEKKPQ  184 (567)
Q Consensus       110 Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~-----GPlllsp~~l~~al~REvi~k~p~  184 (567)
                      ...-+||-+|.+.++++|-++.-+|+-=..++.-..+-|        ++|.     --+++..++-+..|.  +...-.+
T Consensus        87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L--------gi~~~n~yAN~l~fd~~Gk~~gfd--~~~ptsd  156 (227)
T KOG1615|consen   87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL--------GIPKSNIYANELLFDKDGKYLGFD--TNEPTSD  156 (227)
T ss_pred             CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh--------CCcHhhhhhheeeeccCCcccccc--cCCcccc
Confidence            345579999999999999999999997777766665544        3443     223444444443321  1111111


Q ss_pred             H-HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccccccHHh
Q psy12533        185 E-FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSN  252 (567)
Q Consensus       185 ~-fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~  252 (567)
                      . =|.+.+..|+..++-  . -.+..|+..||..|-.     +..-|+ +.-|.++.+..+.+..+|..
T Consensus       157 sggKa~~i~~lrk~~~~--~-~~~mvGDGatDlea~~-----pa~afi-~~~g~~~r~~vk~nak~~~~  216 (227)
T KOG1615|consen  157 SGGKAEVIALLRKNYNY--K-TIVMVGDGATDLEAMP-----PADAFI-GFGGNVIREGVKANAKWYVT  216 (227)
T ss_pred             CCccHHHHHHHHhCCCh--h-eeEEecCCccccccCC-----chhhhh-ccCCceEcHhhHhccHHHHH
Confidence            1 488888888885542  2 3678899999998854     444444 55566666655666666643

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=80.64  E-value=5.9  Score=38.62  Aligned_cols=54  Identities=20%  Similarity=0.108  Sum_probs=42.2

Q ss_pred             EEecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCc--eEEEEccCcccc
Q psy12533         77 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGY--KLLYLSARAIGQ  140 (567)
Q Consensus        77 ylw~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY--~ilYLSaRpi~~  140 (567)
                      .|-..+-|+||+|.|.|||.-          .++-.++-+++-++++++.|-  +++-+|-.+...
T Consensus        35 ~Lk~~Gik~li~DkDNTL~~~----------~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~   90 (168)
T PF09419_consen   35 HLKKKGIKALIFDKDNTLTPP----------YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSS   90 (168)
T ss_pred             hhhhcCceEEEEcCCCCCCCC----------CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcc
Confidence            345667788999999999976          456667789999999998864  588899876444

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=80.26  E-value=4  Score=39.93  Aligned_cols=92  Identities=15%  Similarity=0.191  Sum_probs=54.2

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      +|+.++...++++||++.-+|+.+.   ..++..++.     .+|..  ..++.+.+ .      ....++|+.|...| 
T Consensus        95 ~g~~~~l~~l~~~g~~~~i~S~~~~---~~~~~~l~~-----~~l~~~f~~~~~~~~-~------~~~Kp~~~~~~~~~-  158 (222)
T PRK10826         95 PGVREALALCKAQGLKIGLASASPL---HMLEAVLTM-----FDLRDYFDALASAEK-L------PYSKPHPEVYLNCA-  158 (222)
T ss_pred             CCHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHh-----CcchhcccEEEEccc-C------CCCCCCHHHHHHHH-
Confidence            4788889999999999999999553   344555554     22211  11222221 1      11244555454433 


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                          ..+.-...- ...+|++.+|+.+-+++|++.
T Consensus       159 ----~~~~~~~~~-~~~igDs~~Di~aA~~aG~~~  188 (222)
T PRK10826        159 ----AKLGVDPLT-CVALEDSFNGMIAAKAARMRS  188 (222)
T ss_pred             ----HHcCCCHHH-eEEEcCChhhHHHHHHcCCEE
Confidence                222111111 457899999999999999964

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	567
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-10

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.2 bits (150), Expect = 3e-10
 Identities = 93/570 (16%), Positives = 167/570 (29%), Gaps = 155/570 (27%)

Query: 87  ISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENG---------------YKLL 131
           + D+  +I   + + H   I+    A +G  RLF  +                   YK L
Sbjct: 38  VQDMPKSILSKEEIDH---IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL 94

Query: 132 Y--LSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKIS 189
              +       S +TR Y++   +          L N   +   ++   ++   +     
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDR----------LYNDNQVFAKYNVSRLQPYLK----- 139

Query: 190 CLRDIMALFPPNTQPFY-----AGYGNK---VNDVWSYQAVGIPLS-RIFTIN----SRG 236
            LR   AL               G G K     DV     V   +  +IF +N    +  
Sbjct: 140 -LRQ--ALLELRPAKNVLIDGVLGSG-KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP 195

Query: 237 EVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGTSSEDFTTMAEILNQIPEITDQAVSSDS- 295
           E   EM Q        + Y +D  + S  + +S+        I  ++  +       +  
Sbjct: 196 ETVLEMLQ-------KLLYQIDPNWTSRSDHSSNIKLRI-HSIQAELRRLLKSKPYENCL 247

Query: 296 ---DEDMIRNKRGLNA-NHK-KTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTR--CK 348
                  ++N +  NA N   K L LT+      +  S       S+       T    K
Sbjct: 248 LVLLN--VQNAKAWNAFNLSCKIL-LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304

Query: 349 CYLFKWRWNDK------------IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFT 396
             L K+                   +S I     +             +W      +L T
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRLSII-AESIRDG------LATWDNWKHVNCDKL-T 356

Query: 397 KIKENGYKLLYLSARAIGQSRVTREYLQ--SVKQEDLTLPEGPMLL--------NPTSLL 446
            I E+   +L        +    R+     SV      +P   + L        +   ++
Sbjct: 357 TIIESSLNVL--------EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVV 408

Query: 447 NAFHTE-VIEKKPQEFKISC----------LRDIMAL-------------FPPN--TQPF 480
           N  H   ++EK+P+E  IS           L +  AL             F  +    P+
Sbjct: 409 NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468

Query: 481 YAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQM----F 536
              Y         Y  +G  L  I           E    F+  + +  +L  ++     
Sbjct: 469 LDQY--------FYSHIGHHLKNI--------EHPERMTLFRMVFLDFRFLEQKIRHDST 512

Query: 537 PSSLEGTSSEDFSQFVYWREPICETLPEDT 566
             +  G+      Q  +++  IC+  P+  
Sbjct: 513 AWNASGSILNTLQQLKFYKPYICDNDPKYE 542

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.2 bits (150), Expect = 4e-10
 Identities = 73/499 (14%), Positives = 145/499 (29%), Gaps = 130/499 (26%)

Query: 70  TRCKCY------LFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKI 123
           +R + Y      L + R    ++I   DG      VLG      GK W    V   +   
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLI---DG------VLG-----SGKTWVALDVCLSYKVQ 177

Query: 124 KENGYKLLYLSARAIGQSRVTREYLQS----VKQEDLTLPEGP---------------ML 164
            +  +K+ +L+ +         E LQ     +     +  +                  L
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 165 L----NPTSLL---NAFHTEVIEKKPQEFKISC--L---RDI------------------ 194
           L        LL   N  + +        F +SC  L   R                    
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNA----FNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293

Query: 195 --MALFPPNTQPFYAGY-GNKVNDVWSYQAVGI-PLSRIFTINSRGEVKHEMTQTFQSTY 250
             M L P   +     Y   +  D+   + +   P      ++   E   +   T+   +
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDL-PREVLTTNPR----RLSIIAESIRDGLATWD-NW 347

Query: 251 SNMSYL-VDQMFPSSLEGTSSED----FTTMAEILN---QIPEIT-----DQAVSSDSDE 297
            +++   +  +  SSL      +    F  ++ +      IP I         + SD   
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS-VFPPSAHIPTILLSLIWFDVIKSDVMV 406

Query: 298 DM--IRNKRGLNANHKK-TLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKW 354
            +  +     +    K+ T+ + S  +           +  S+   Y    +        
Sbjct: 407 VVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN-IPKTFD----- 460

Query: 355 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFT-------KIKENGYKLLY 407
             +D ++   +D        +GH L  +           +F        KI+ +      
Sbjct: 461 --SDDLIPPYLDQYFYSH--IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516

Query: 408 LSARA--IGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465
             +    + Q +  + Y+     +    P+   L+N  ++L+      IE+     K + 
Sbjct: 517 SGSILNTLQQLKFYKPYIC--DND----PKYERLVN--AILDFLPK--IEENLICSKYTD 566

Query: 466 LRDIMALFPPNTQPFYAGY 484
           L  I AL   +   F   +
Sbjct: 567 LLRI-ALMAEDEAIFEEAH 584

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	567
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.72
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.65
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.65
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.59
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.55
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.55
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.25
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.23
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.23
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.18
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.16
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.14
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.12
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	98.12
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.12
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.09
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.08
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.08
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	98.05
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.05
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.04
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.04
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.03
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	98.01
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.01
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	97.99
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.96
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	97.95
3mmz_A	176	Putative HAD family hydrolase; structural genomics	97.95
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	97.91
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	97.91
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	97.9
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	97.89
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.88
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	97.88
3fvv_A	232	Uncharacterized protein; unknown function, structu	97.85
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	97.84
2o2x_A	218	Hypothetical protein; structural genomics, joint c	97.83
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	97.82
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	97.81
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	97.81
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.81
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.8
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.8
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	97.8
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	97.78
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	97.76
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.75
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	97.74
2o2x_A	218	Hypothetical protein; structural genomics, joint c	97.73
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	97.71
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	97.71
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	97.71
3mn1_A	189	Probable YRBI family phosphatase; structural genom	97.69
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	97.69
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	97.69
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.68
3mn1_A	189	Probable YRBI family phosphatase; structural genom	97.67
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.67
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	97.67
3fvv_A	232	Uncharacterized protein; unknown function, structu	97.67
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	97.66
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	97.65
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	97.65
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.63
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	97.62
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	97.61
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.61
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	97.57
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.56
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	97.56
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	97.56
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	97.56
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	97.56
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	97.56
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	97.55
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	97.54
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	97.53
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	97.52
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	97.52
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	97.52
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	97.51
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	97.5
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	97.5
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	97.5
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.49
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	97.47
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	97.47
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	97.46
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	97.46
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	97.46
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	97.45
1te2_A	226	Putative phosphatase; structural genomics, phospha	97.45
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	97.44
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.41
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	97.41
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	97.4
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	97.38
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	97.38
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	97.37
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	97.37
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	97.37
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	97.37
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	97.36
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	97.35
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	97.33
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	97.32
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	97.32
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	97.31
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	97.31
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	97.29
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.29
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	97.29
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	97.28
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	97.27
2hsz_A	243	Novel predicted phosphatase; structural genomics,	97.25
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	97.25
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	97.25
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	97.24
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	97.24
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	97.24
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	97.23
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	97.23
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	97.22
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	97.22
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	97.22
3dao_A	283	Putative phosphatse; structural genomics, joint ce	97.21
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	97.21
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	97.2
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	97.18
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	97.18
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	97.18
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	97.17
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	97.17
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	97.15
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	97.15
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	97.15
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.15
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	97.13
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	97.12
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	97.12
1te2_A	226	Putative phosphatase; structural genomics, phospha	97.12
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.1
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	97.1
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	97.08
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.08
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	97.08
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	97.08
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.07
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	97.06
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	97.06
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	97.05
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.05
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	97.04
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	97.04
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	97.03
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	97.01
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	97.0
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	96.99
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	96.98
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	96.98
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	96.98
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	96.96
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	96.96
2zg6_A	220	Putative uncharacterized protein ST2620, probable	96.95
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	96.93
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	96.92
2hsz_A	243	Novel predicted phosphatase; structural genomics,	96.91
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	96.89
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	96.89
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	96.85
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	96.85
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	96.84
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	96.84
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	96.82
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	96.81
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	96.81
3dao_A	283	Putative phosphatse; structural genomics, joint ce	96.8
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	96.8
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	96.8
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	96.8
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	96.8
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	96.79
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	96.78
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	96.76
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	96.76
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	96.76
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	96.75
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	96.74
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	96.74
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	96.74
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	96.73
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	96.73
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	96.72
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	96.71
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	96.7
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	96.69
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	96.69
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	96.68
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	96.68
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	96.67
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	96.66
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	96.66
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	96.66
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	96.66
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	96.66
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	96.66
2zg6_A	220	Putative uncharacterized protein ST2620, probable	96.64
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	96.64
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	96.63
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	96.62
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	96.62
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	96.61
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	96.61
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	96.6
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	96.57
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	96.54
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	96.54
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	96.53
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	96.52
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	96.51
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	96.51
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	96.51
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	96.5
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	96.49
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	96.48
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	96.47
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	96.47
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	96.44
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	96.42
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	96.36
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	96.34
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	96.31
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	96.23
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	96.23
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	96.22
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	96.17
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	96.14
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	96.14
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	96.12
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	96.11
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	96.09
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	96.08
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	96.02
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	96.02
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	95.99
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	95.95
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	95.88
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	95.88
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	95.81
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	95.81
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	95.73
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	95.66
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	95.63
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	95.55
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	95.53
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	95.49
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	95.39
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	95.38
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	95.34
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	94.88
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	93.85
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	93.3
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	92.94
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	92.24
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	91.37
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	91.34
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	91.09
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	90.99
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	90.88
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	90.69
1prx_A	224	HORF6; peroxiredoxin, hydrogen peroxide, redox reg	90.46
3lwa_A	183	Secreted thiol-disulfide isomerase; thioredoxin, P	89.9
3gkn_A	163	Bacterioferritin comigratory protein; BCP, PRX, at	89.82
3ixr_A	179	Bacterioferritin comigratory protein; alpha beta p	89.13
1xcc_A	220	1-Cys peroxiredoxin; unknown function, structural	88.77
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	88.75
3qpm_A	240	Peroxiredoxin; oxidoreductase, thioredoxin fold, p	88.66
2v2g_A	233	Peroxiredoxin 6; oxidoreductase, antioxidant enzym	88.36
1prx_A	224	HORF6; peroxiredoxin, hydrogen peroxide, redox reg	87.52
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	87.24
4fo5_A	143	Thioredoxin-like protein; AHPC/TSA family protein,	87.14
3hcz_A	148	Possible thiol-disulfide isomerase; APC61559.2, cy	86.97
2ggt_A	164	SCO1 protein homolog, mitochondrial; copper chaper	86.74
1xzo_A	174	BSSCO, hypothetical protein YPMQ; thioredoxin-like	86.47
3drn_A	161	Peroxiredoxin, bacterioferritin comigratory prote	86.26
3kcm_A	154	Thioredoxin family protein; SGX, thioredoxin prote	86.09
3tjj_A	254	Peroxiredoxin-4; thioredoxin fold, sulfenylation,	85.92
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	85.87
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	85.83
2gs3_A	185	PHGPX, GPX-4, phospholipid hydroperoxide glutathio	85.76
1xzo_A	174	BSSCO, hypothetical protein YPMQ; thioredoxin-like	85.44
2lrn_A	152	Thiol:disulfide interchange protein; structural ge	85.34
3fkf_A	148	Thiol-disulfide oxidoreductase; structural genomic	85.3
2f9s_A	151	Thiol-disulfide oxidoreductase RESA; thioredoxin-l	84.96
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	84.83
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	84.83
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	84.78
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	84.51
2ggt_A	164	SCO1 protein homolog, mitochondrial; copper chaper	84.46
3lwa_A	183	Secreted thiol-disulfide isomerase; thioredoxin, P	84.36
2rli_A	171	SCO2 protein homolog, mitochondrial; copper protei	84.33
1jfu_A	186	Thiol:disulfide interchange protein TLPA; thioredo	84.28
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	84.23
3me7_A	170	Putative uncharacterized protein; electron transfe	83.7
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	83.56
3drn_A	161	Peroxiredoxin, bacterioferritin comigratory prote	83.42
3ewl_A	142	Uncharacterized conserved protein BF1870; alpha-be	83.27
3eur_A	142	Uncharacterized protein; PSI2,MCSG, conserved prot	82.9
3ha9_A	165	Uncharacterized thioredoxin-like protein; PSI, MCS	82.8
2p5q_A	170	Glutathione peroxidase 5; thioredoxin fold, oxidor	82.56
3raz_A	151	Thioredoxin-related protein; structural genomics,	82.24
2obi_A	183	PHGPX, GPX-4, phospholipid hydroperoxide glutathio	82.0
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	81.84
3qpm_A	240	Peroxiredoxin; oxidoreductase, thioredoxin fold, p	81.82
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	81.8
3kcm_A	154	Thioredoxin family protein; SGX, thioredoxin prote	81.75
2p5q_A	170	Glutathione peroxidase 5; thioredoxin fold, oxidor	81.64
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	81.61
1n8j_A	186	AHPC, alkyl hydroperoxide reductase C22 protein; p	81.59
2h30_A	164	Thioredoxin, peptide methionine sulfoxide reductas	81.42
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	81.35
3fw2_A	150	Thiol-disulfide oxidoreductase; structural genomic	81.34
4hde_A	170	SCO1/SENC family lipoprotein; structural genomics,	81.21
1psq_A	163	Probable thiol peroxidase; structural genomics, NY	80.99
1xvw_A	160	Hypothetical protein RV2238C/MT2298; thioredoxin f	80.99
2lrt_A	152	Uncharacterized protein; structural genomics, thio	80.93
4hde_A	170	SCO1/SENC family lipoprotein; structural genomics,	80.9
2f9s_A	151	Thiol-disulfide oxidoreductase RESA; thioredoxin-l	80.76
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	80.37
1jfu_A	186	Thiol:disulfide interchange protein TLPA; thioredo	80.29
3or5_A	165	Thiol:disulfide interchange protein, thioredoxin p	80.15
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	80.13

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.72  E-value=3.8e-08  Score=97.97  Aligned_cols=131  Identities=19%  Similarity=0.242  Sum_probs=93.8

Q ss_pred             CCeEEEEecCCccccCCccccc-ccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhccc---CCcc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHV-LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQ---EDLT  432 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~-~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q---~~~~  432 (567)
                      ..+++++|+|||+.......++ +..+++...-+|+.++.+.++++||++.++|+|+...+..|+.||..+.+   +.++
T Consensus       158 ~~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~  237 (301)
T 1ltq_A          158 KPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAG  237 (301)
T ss_dssp             SCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTC
T ss_pred             ccceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccC
Confidence            3478999999999887655443 44566667789999999999999999999999999988888888865221   1124


Q ss_pred             CCCCceecCCCchhhhhhhhhhccCh-hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        433 LPEGPMLLNPTSLLNAFHTEVIEKKP-QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       433 lP~GPvl~spd~l~~al~rEvi~k~p-~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      ++...+++..+.          .++| ...|..+++.+..   ..... ...+|++.+|+.|.+++||++
T Consensus       238 ~~~~~~~~~~~~----------~~kp~p~~~~~~~~~~~~---~~~~~-~~~vgD~~~di~~a~~aG~~~  293 (301)
T 1ltq_A          238 VPLVMQCQREQG----------DTRKDDVVKEEIFWKHIA---PHFDV-KLAIDDRTQVVEMWRRIGVEC  293 (301)
T ss_dssp             CCCSEEEECCTT----------CCSCHHHHHHHHHHHHTT---TTCEE-EEEEECCHHHHHHHHHTTCCE
T ss_pred             CCchheeeccCC----------CCcHHHHHHHHHHHHHhc---cccce-EEEeCCcHHHHHHHHHcCCeE
Confidence            565566654432          1234 4566777776632   11122 235999999999999999975

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.65  E-value=2.3e-08  Score=100.89  Aligned_cols=113  Identities=14%  Similarity=0.175  Sum_probs=85.5

Q ss_pred             CCeEEEEecCCccccCCcc--------ccccc-------ccCcCCcchhHHHHHHHHHHCCceEEEEccCccc-chHHHH
Q psy12533        357 NDKIVISDIDGTITKSDVL--------GHVLP-------IMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG-QSRVTR  420 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~--------G~~~~-------~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~-qa~~Tr  420 (567)
                      ..++||||||||+|.+...        ..+-+       .-|....-||+.++++.++++|++|+++|+|+.. +...|.
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~  136 (262)
T 3ocu_A           57 KKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTI  136 (262)
T ss_dssp             CEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHH
T ss_pred             CCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHH
Confidence            4468999999999988531        11211       2456667889999999999999999999999998 999999


Q ss_pred             HHHHhcccCCccCCC-C--ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHh
Q psy12533        421 EYLQSVKQEDLTLPE-G--PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS  493 (567)
Q Consensus       421 ~~L~~~~Q~~~~lP~-G--Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~a  493 (567)
                      .+|+.     +++|. .  .|++.++               ...|...++.|...   ++ .+++=+|+..+|+.+
T Consensus       137 ~~L~~-----lGi~~~~~~~Lilr~~---------------~~~K~~~r~~l~~~---Gy-~iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          137 DDMKR-----LGFNGVEESAFYLKKD---------------KSAKAARFAEIEKQ---GY-EIVLYVGDNLDDFGN  188 (262)
T ss_dssp             HHHHH-----HTCSCCSGGGEEEESS---------------CSCCHHHHHHHHHT---TE-EEEEEEESSGGGGCS
T ss_pred             HHHHH-----cCcCcccccceeccCC---------------CCChHHHHHHHHhc---CC-CEEEEECCChHHhcc
Confidence            99999     89985 3  4555332               12366677777762   23 357889999999885

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.65  E-value=4.1e-08  Score=98.96  Aligned_cols=113  Identities=19%  Similarity=0.259  Sum_probs=86.3

Q ss_pred             CCeEEEEecCCccccCCcc-------cccc-c-------ccCcCCcchhHHHHHHHHHHCCceEEEEccCccc-chHHHH
Q psy12533        357 NDKIVISDIDGTITKSDVL-------GHVL-P-------IMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG-QSRVTR  420 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~-------G~~~-~-------~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~-qa~~Tr  420 (567)
                      ..++||||||||+|.+...       +.-+ +       .-|....-||+.++++.++++|++|+++|+|+.. +...|.
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~  136 (260)
T 3pct_A           57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTV  136 (260)
T ss_dssp             -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHH
T ss_pred             CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHH
Confidence            3458999999999988531       1112 1       3456667889999999999999999999999998 999999


Q ss_pred             HHHHhcccCCccCCCC---ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHh
Q psy12533        421 EYLQSVKQEDLTLPEG---PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS  493 (567)
Q Consensus       421 ~~L~~~~Q~~~~lP~G---Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~a  493 (567)
                      .+|+.     +++|..   .|++.++.               ..|...++.|...    +..+.+=+|+..+|+.+
T Consensus       137 ~~L~~-----lGi~~~~~~~Lilr~~~---------------~~K~~~r~~L~~~----gy~iv~~iGD~~~Dl~~  188 (260)
T 3pct_A          137 DDMKR-----LGFTGVNDKTLLLKKDK---------------SNKSVRFKQVEDM----GYDIVLFVGDNLNDFGD  188 (260)
T ss_dssp             HHHHH-----HTCCCCSTTTEEEESSC---------------SSSHHHHHHHHTT----TCEEEEEEESSGGGGCG
T ss_pred             HHHHH-----cCcCccccceeEecCCC---------------CChHHHHHHHHhc----CCCEEEEECCChHHcCc
Confidence            99999     888863   45554421               2367777777763    33458889999999986

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.59  E-value=1.1e-07  Score=94.52  Aligned_cols=174  Identities=17%  Similarity=0.209  Sum_probs=110.4

Q ss_pred             eccCCHHHHHhCcCCCCCceeEEE-EEeccCCcceeeeEE-EEecC-CCcEEEEecCCccccCCccccc-cccccccccc
Q psy12533         38 TLRLTSEQIAGLELRSGMNEVEFS-VTTAYQGTTRCKCYL-FKWRW-NDKIVISDIDGTITKSDVLGHV-LPIMGKDWAQ  113 (567)
Q Consensus        38 ~lrlts~qL~~l~Lk~G~N~v~f~-v~t~~qG~~~~~~~i-ylw~~-~~kiVISDIDGTITkSD~lG~i-l~~lGkDwth  113 (567)
                      -|..+.|.+.++..+++.+.+.-. +..+++.-....... |+.+. ..+.+++|+|||+.......++ +..+++...-
T Consensus       111 ~l~~~~e~~~~R~~~R~~~~~~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~  190 (301)
T 1ltq_A          111 VFDVPWTELVKRNSKRGTKAVPIDVLRSMYKSMREYLGLPVYNGTPGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVIN  190 (301)
T ss_dssp             ECCCCHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHHHTCCCCCCCTTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBC
T ss_pred             EEECCHHHHHHHHHhccCCCCCHHHHHHHHHHHhcccCCcceeccccccceEEEeCCCCcccccCCCchhhhhccccCCC
Confidence            455677777777766654433211 122221100000111 33333 3478999999999887655443 4455666778


Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh----cccCCccCCCCceecCCCchhhhhhhhhhccChh-HHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS----VKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQ-EFKI  188 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~----~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~-~fKi  188 (567)
                      +||.++.+.++++||++.++|+|+..+++.++.||+.    ++| .++++...+++..+.          ..+|+ +.|.
T Consensus       191 ~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~----------~~kp~p~~~~  259 (301)
T 1ltq_A          191 PMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVED-IAGVPLVMQCQREQG----------DTRKDDVVKE  259 (301)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHH-TTCCCCSEEEECCTT----------CCSCHHHHHH
T ss_pred             hHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhccccccc-ccCCCchheeeccCC----------CCcHHHHHHH
Confidence            8999999999999999999999999888878887765    222 124565666655432          12344 4677


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      .+++.+..  ++ .. ....+|++..|+.|.+++||++
T Consensus       260 ~~~~~~~~--~~-~~-~~~~vgD~~~di~~a~~aG~~~  293 (301)
T 1ltq_A          260 EIFWKHIA--PH-FD-VKLAIDDRTQVVEMWRRIGVEC  293 (301)
T ss_dssp             HHHHHHTT--TT-CE-EEEEEECCHHHHHHHHHTTCCE
T ss_pred             HHHHHHhc--cc-cc-eEEEeCCcHHHHHHHHHcCCeE
Confidence            77766521  11 11 2345999999999999999975

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.55  E-value=6.2e-08  Score=97.79  Aligned_cols=111  Identities=14%  Similarity=0.170  Sum_probs=84.1

Q ss_pred             cEEEEecCCccccCCcc--------ccccc-------cccccccchhHHHHHHHHHHCCceEEEEccCccc-chHHHHHH
Q psy12533         84 KIVISDIDGTITKSDVL--------GHVLP-------IMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG-QSRVTREY  147 (567)
Q Consensus        84 kiVISDIDGTITkSD~l--------G~il~-------~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~-~a~~Tr~~  147 (567)
                      ++||+|||||+|.+...        ..+-+       .-|.+-.-+|+.++++.++++|++|+++|+|+.. +.+.|..+
T Consensus        59 ~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~  138 (262)
T 3ocu_A           59 KAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDD  138 (262)
T ss_dssp             EEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHH
T ss_pred             eEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHH
Confidence            48999999999987631        11211       2345556779999999999999999999999998 99999999


Q ss_pred             HHhcccCCccCCC-C--ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhh
Q psy12533        148 LQSVKQEDLTLPE-G--PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS  218 (567)
Q Consensus       148 L~~~~q~~~~LP~-G--Plllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~a  218 (567)
                      |+.     .++|. .  .|++.++               ...|...+..|...    +.-+++=+|+-..|..+
T Consensus       139 L~~-----lGi~~~~~~~Lilr~~---------------~~~K~~~r~~l~~~----Gy~iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          139 MKR-----LGFNGVEESAFYLKKD---------------KSAKAARFAEIEKQ----GYEIVLYVGDNLDDFGN  188 (262)
T ss_dssp             HHH-----HTCSCCSGGGEEEESS---------------CSCCHHHHHHHHHT----TEEEEEEEESSGGGGCS
T ss_pred             HHH-----cCcCcccccceeccCC---------------CCChHHHHHHHHhc----CCCEEEEECCChHHhcc
Confidence            999     89985 3  5555442               13477777778765    22357888888888875

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.55  E-value=9.3e-08  Score=96.39  Aligned_cols=111  Identities=19%  Similarity=0.261  Sum_probs=85.6

Q ss_pred             cEEEEecCCccccCCcc-------cc-ccc-------cccccccchhHHHHHHHHHHCCceEEEEccCccc-chHHHHHH
Q psy12533         84 KIVISDIDGTITKSDVL-------GH-VLP-------IMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG-QSRVTREY  147 (567)
Q Consensus        84 kiVISDIDGTITkSD~l-------G~-il~-------~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~-~a~~Tr~~  147 (567)
                      ++||+|||||+|.+...       +. +-+       .-|..-.-+|+.++++.++++|++|+++|+|+.. +.+.|..+
T Consensus        59 ~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~  138 (260)
T 3pct_A           59 KAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDD  138 (260)
T ss_dssp             EEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHH
T ss_pred             CEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHH
Confidence            48999999999987531       11 111       2455566779999999999999999999999998 99999999


Q ss_pred             HHhcccCCccCCCC---ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhh
Q psy12533        148 LQSVKQEDLTLPEG---PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS  218 (567)
Q Consensus       148 L~~~~q~~~~LP~G---Plllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~a  218 (567)
                      |+.     .++|..   +|++.++               ...|...++.|...    ..-+++-+|+...|..+
T Consensus       139 L~~-----lGi~~~~~~~Lilr~~---------------~~~K~~~r~~L~~~----gy~iv~~iGD~~~Dl~~  188 (260)
T 3pct_A          139 MKR-----LGFTGVNDKTLLLKKD---------------KSNKSVRFKQVEDM----GYDIVLFVGDNLNDFGD  188 (260)
T ss_dssp             HHH-----HTCCCCSTTTEEEESS---------------CSSSHHHHHHHHTT----TCEEEEEEESSGGGGCG
T ss_pred             HHH-----cCcCccccceeEecCC---------------CCChHHHHHHHHhc----CCCEEEEECCChHHcCc
Confidence            999     889863   4665542               13477888888774    23458889998999886

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.25  E-value=3.4e-06  Score=76.89  Aligned_cols=131  Identities=11%  Similarity=0.178  Sum_probs=76.7

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCccc-----c-------hHHHHHHHHhc
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG-----Q-------SRVTREYLQSV  426 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~-----q-------a~~Tr~~L~~~  426 (567)
                      |+|+||+||||+...  .++......--..+|+.++.+.++++||++.-+|+++..     .       .+..+..|+. 
T Consensus         2 k~v~~D~DGtL~~~~--~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-   78 (179)
T 3l8h_A            2 KLIILDRDGVVNQDS--DAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQ-   78 (179)
T ss_dssp             CEEEECSBTTTBCCC--TTCCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHH-
T ss_pred             CEEEEcCCCccccCC--CccCCCHHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHh-
Confidence            789999999999763  223322222236889999999999999999999999841     1       1333444444 


Q ss_pred             ccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCE
Q psy12533        427 KQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRI  504 (567)
Q Consensus       427 ~Q~~~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rI  504 (567)
                          .+.+--.++..+-.  +  ..++.  .++|+.|+..+ +.+. + .+ ...  ..+|++.+|+.+=+++|+.   .
T Consensus        79 ----~g~~~~~~~~~~~~--~--~~~~~~~KP~~~~~~~~~-~~~~-~-~~-~~~--~~vGD~~~Di~~a~~aG~~---~  141 (179)
T 3l8h_A           79 ----MGGVVDAIFMCPHG--P--DDGCACRKPLPGMYRDIA-RRYD-V-DL-AGV--PAVGDSLRDLQAAAQAGCA---P  141 (179)
T ss_dssp             ----TTCCCCEEEEECCC--T--TSCCSSSTTSSHHHHHHH-HHHT-C-CC-TTC--EEEESSHHHHHHHHHHTCE---E
T ss_pred             ----CCCceeEEEEcCCC--C--CCCCCCCCCCHHHHHHHH-HHcC-C-CH-HHE--EEECCCHHHHHHHHHCCCc---E
Confidence                22111122211100  0  01222  23446665433 2221 1 12 222  4689999999999999995   3


Q ss_pred             EEEcC
Q psy12533        505 FTINS  509 (567)
Q Consensus       505 F~In~  509 (567)
                      ..|..
T Consensus       142 i~v~~  146 (179)
T 3l8h_A          142 WLVQT  146 (179)
T ss_dssp             EEEST
T ss_pred             EEECC
Confidence            44544

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.23  E-value=1.8e-06  Score=79.60  Aligned_cols=65  Identities=18%  Similarity=0.242  Sum_probs=52.6

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  434 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP  434 (567)
                      -|+|++|+||||..++.     +.+++.  -+++.+..++++++|++|+.+|||+......+..||..     +++|
T Consensus         3 ~k~i~~DlDGTL~~~~~-----~~i~~~--~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~-----~gi~   67 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHRY-----PRIGEE--IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-----RGLE   67 (142)
T ss_dssp             CCEEEECCBTTTBCSCT-----TSCCCB--CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-----TTCC
T ss_pred             CeEEEEECcCCCCCCCC-----cccccc--CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHH-----cCCC
Confidence            57899999999998752     223332  35899999999999999999999998777778888877     6675

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.23  E-value=2.7e-06  Score=80.76  Aligned_cols=128  Identities=14%  Similarity=0.163  Sum_probs=77.9

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcccc------------hHHHHHHHH
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQ------------SRVTREYLQ  424 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~q------------a~~Tr~~L~  424 (567)
                      -|+|+||+||||+..+.   +.... .++ ..+|+.++.+.++++||++..+|+++...            ...++..|+
T Consensus        25 ~k~v~~D~DGTL~~~~~---~~~~~-~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~  100 (211)
T 2gmw_A           25 VPAIFLDRDGTINVDHG---YVHEI-DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLA  100 (211)
T ss_dssp             BCEEEECSBTTTBCCCS---SCCSG-GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCCCeECCCC---cccCc-ccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHH
Confidence            46899999999998752   22222 233 67899999999999999999999998311            234455555


Q ss_pred             hcccCCccCCCCceecCCC---chhhhhhhhhhcc--ChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        425 SVKQEDLTLPEGPMLLNPT---SLLNAFHTEVIEK--KPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       425 ~~~Q~~~~lP~GPvl~spd---~l~~al~rEvi~k--~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                      .     .+++--.++.+++   +.......++...  +|+.|+..+ +.+. + .+ ...  ..+|++.+|+.+=+++|+
T Consensus       101 ~-----~gl~f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~-~~lg-i-~~-~~~--~~VGD~~~Di~~a~~aG~  169 (211)
T 2gmw_A          101 D-----RDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSAR-DYLH-I-DM-AAS--YMVGDKLEDMQAAVAANV  169 (211)
T ss_dssp             H-----TTCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHH-HHHT-B-CG-GGC--EEEESSHHHHHHHHHTTC
T ss_pred             H-----cCCceEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHH-HHcC-C-CH-HHE--EEEcCCHHHHHHHHHCCC
Confidence            5     4443222333322   1111111222233  456666543 3321 1 11 222  478999999999999998


Q ss_pred             C
Q psy12533        500 P  500 (567)
Q Consensus       500 p  500 (567)
                      .
T Consensus       170 ~  170 (211)
T 2gmw_A          170 G  170 (211)
T ss_dssp             S
T ss_pred             c
Confidence            5

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.18  E-value=5.1e-06  Score=75.67  Aligned_cols=125  Identities=12%  Similarity=0.176  Sum_probs=73.0

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCccc----c--------hHHHHHHHHhc
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG----Q--------SRVTREYLQSV  151 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~----~--------a~~Tr~~L~~~  151 (567)
                      |+|++|+||||+...  .++......-...+|+.++.+.++++||++.-+|+++..    .        .+..+..|+. 
T Consensus         2 k~v~~D~DGtL~~~~--~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-   78 (179)
T 3l8h_A            2 KLIILDRDGVVNQDS--DAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQ-   78 (179)
T ss_dssp             CEEEECSBTTTBCCC--TTCCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHH-
T ss_pred             CEEEEcCCCccccCC--CccCCCHHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHh-
Confidence            789999999999763  233322223345689999999999999999999999841    1        1333444544 


Q ss_pred             ccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        152 KQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       152 ~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                          .+.+--.++..+-..    ..++...+|  +.|+..+ +.+ . .++ ..  ...+|++.+|+.+=+++|+.
T Consensus        79 ----~g~~~~~~~~~~~~~----~~~~~~~KP~~~~~~~~~-~~~-~-~~~-~~--~~~vGD~~~Di~~a~~aG~~  140 (179)
T 3l8h_A           79 ----MGGVVDAIFMCPHGP----DDGCACRKPLPGMYRDIA-RRY-D-VDL-AG--VPAVGDSLRDLQAAAQAGCA  140 (179)
T ss_dssp             ----TTCCCCEEEEECCCT----TSCCSSSTTSSHHHHHHH-HHH-T-CCC-TT--CEEEESSHHHHHHHHHHTCE
T ss_pred             ----CCCceeEEEEcCCCC----CCCCCCCCCCHHHHHHHH-HHc-C-CCH-HH--EEEECCCHHHHHHHHHCCCc
Confidence                221111222111000    012223344  4444332 222 1 122 12  34688899999999999995

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.16  E-value=3.3e-06  Score=77.84  Aligned_cols=65  Identities=18%  Similarity=0.242  Sum_probs=52.9

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  159 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP  159 (567)
                      -|+|++|+||||..++.     +.+++.  -+++.+..++++++|++|+.+|||+......+..||..     +++|
T Consensus         3 ~k~i~~DlDGTL~~~~~-----~~i~~~--~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~-----~gi~   67 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHRY-----PRIGEE--IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-----RGLE   67 (142)
T ss_dssp             CCEEEECCBTTTBCSCT-----TSCCCB--CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-----TTCC
T ss_pred             CeEEEEECcCCCCCCCC-----cccccc--CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHH-----cCCC
Confidence            57899999999998652     123332  35899999999999999999999998888888888877     6675

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.14  E-value=4.4e-06  Score=79.31  Aligned_cols=129  Identities=15%  Similarity=0.127  Sum_probs=76.5

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccc------------hHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ------------SRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~------------a~~Tr~~L~~  150 (567)
                      -|+|++|+||||+..+.   +......--..+|+.++.+.++++||++..+|+++...            ...++..|+.
T Consensus        25 ~k~v~~D~DGTL~~~~~---~~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~  101 (211)
T 2gmw_A           25 VPAIFLDRDGTINVDHG---YVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD  101 (211)
T ss_dssp             BCEEEECSBTTTBCCCS---SCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCCCeECCCC---cccCcccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH
Confidence            46899999999998752   22112222356899999999999999999999998310            2344555655


Q ss_pred             cccCCccCCCCceecCCC---chhhhhhhhhhccC--hhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        151 VKQEDLTLPEGPMLLNPT---SLLNAFHTEVIEKK--PQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       151 ~~q~~~~LP~GPlllsp~---~l~~al~REvi~k~--p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                           .+++--.++.+++   +.......++...+  |+.|+..+ +.+ .+ .+ ..  ...+|++.+|+.+=+++|+.
T Consensus       102 -----~gl~f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~-~~l-gi-~~-~~--~~~VGD~~~Di~~a~~aG~~  170 (211)
T 2gmw_A          102 -----RDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSAR-DYL-HI-DM-AA--SYMVGDKLEDMQAAVAANVG  170 (211)
T ss_dssp             -----TTCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHH-HHH-TB-CG-GG--CEEEESSHHHHHHHHHTTCS
T ss_pred             -----cCCceEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHH-HHc-CC-CH-HH--EEEEcCCHHHHHHHHHCCCc
Confidence                 3443222333321   11100111222334  44455443 222 11 11 12  34688999999999999985

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.12  E-value=7.8e-06  Score=76.01  Aligned_cols=129  Identities=17%  Similarity=0.197  Sum_probs=81.3

Q ss_pred             CeEEEEecCCccccCCc---ccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533        358 DKIVISDIDGTITKSDV---LGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  434 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~---~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP  434 (567)
                      -|+|+||+||||+....   ..+++.....-...+|+.++.+.++++||++.-+|+++.......+..|+.     .++.
T Consensus         3 ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~-----~gl~   77 (189)
T 3ib6_A            3 LTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN-----FGII   77 (189)
T ss_dssp             CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-----TTCG
T ss_pred             ceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh-----cCch
Confidence            47899999999987433   223332222334789999999999999999999999988766777888877     4442


Q ss_pred             C--CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCC-cccHHhHHHcCCC
Q psy12533        435 E--GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNK-VNDVWSYQAVGIP  500 (567)
Q Consensus       435 ~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr-~tDv~aY~~vGIp  500 (567)
                      .  --++++.+.. ..  .....++|+.|+..+ +.+.    -.... ..-+|++ .+|+.+=+++|+.
T Consensus        78 ~~fd~i~~~~~~~-~~--~~~~KP~p~~~~~~~-~~~~----~~~~~-~l~VGD~~~~Di~~A~~aG~~  137 (189)
T 3ib6_A           78 DYFDFIYASNSEL-QP--GKMEKPDKTIFDFTL-NALQ----IDKTE-AVMVGNTFESDIIGANRAGIH  137 (189)
T ss_dssp             GGEEEEEECCTTS-ST--TCCCTTSHHHHHHHH-HHHT----CCGGG-EEEEESBTTTTHHHHHHTTCE
T ss_pred             hheEEEEEccccc-cc--cCCCCcCHHHHHHHH-HHcC----CCccc-EEEECCCcHHHHHHHHHCCCe
Confidence            1  0122222110 00  001133456665443 3221    11122 3468899 7999999999995

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=98.12  E-value=5.2e-06  Score=76.60  Aligned_cols=125  Identities=17%  Similarity=0.209  Sum_probs=70.8

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.++...++++||++..+|+.+..   .++..|+.     .++..  .+ ..+..+   ..|....+|   |.+.+
T Consensus        71 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~-----~~l~~--~f-~~~~i~---~~~~~~~kp---~~~~~  133 (205)
T 3m9l_A           71 PAPGAVELVRELAGRGYRLGILTRNARE---LAHVTLEA-----IGLAD--CF-AEADVL---GRDEAPPKP---HPGGL  133 (205)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHH-----TTCGG--GS-CGGGEE---CTTTSCCTT---SSHHH
T ss_pred             CCccHHHHHHHHHhcCCeEEEEeCCchH---HHHHHHHH-----cCchh--hc-CcceEE---eCCCCCCCC---CHHHH
Confidence            4679999999999999999999998643   34566655     33321  00 001111   223333344   22333


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhhHHhhh
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLV  532 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~v  532 (567)
                      +.+...++-.... ...||++.+|+.+-+++|+.   ...++....-..+.......+...|-+++
T Consensus       134 ~~~~~~~g~~~~~-~i~iGD~~~Di~~a~~aG~~---~i~v~~~~~~~~~~ad~v~~~~~el~~~~  195 (205)
T 3m9l_A          134 LKLAEAWDVSPSR-MVMVGDYRFDLDCGRAAGTR---TVLVNLPDNPWPELTDWHARDCAQLRDLL  195 (205)
T ss_dssp             HHHHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE---EEECSSSSCSCGGGCSEECSSHHHHHHHH
T ss_pred             HHHHHHcCCCHHH-EEEECCCHHHHHHHHHcCCE---EEEEeCCCCcccccCCEEeCCHHHHHHHH
Confidence            3444433322223 45899999999999999994   34444433322333333445555555444

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.12  E-value=4.1e-06  Score=75.44  Aligned_cols=112  Identities=21%  Similarity=0.232  Sum_probs=71.9

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCC--cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  435 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw--~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~  435 (567)
                      -|+|+||+||||+.++..   ++.-++.+  ..++..++.+.++++||++..+|+|+...   ++.+++.     .++..
T Consensus         9 ~k~v~~DlDGTL~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~---~~~~l~~-----~gl~~   77 (162)
T 2p9j_A            9 LKLLIMDIDGVLTDGKLY---YTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAP---LITRLKE-----LGVEE   77 (162)
T ss_dssp             CCEEEECCTTTTSCSEEE---EETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHH---HHHHHHH-----TTCCE
T ss_pred             eeEEEEecCcceECCcee---ecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHH---HHHHHHH-----cCCHh
Confidence            478999999999987531   11122221  35678899999999999999999998544   4666766     44431


Q ss_pred             CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        436 GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       436 GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                               .|..     ...+|+.|+..     ...+.-.... ...+|++.+|+.+-+++|++
T Consensus        78 ---------~~~~-----~kp~~~~~~~~-----~~~~~~~~~~-~~~vGD~~~Di~~a~~ag~~  122 (162)
T 2p9j_A           78 ---------IYTG-----SYKKLEIYEKI-----KEKYSLKDEE-IGFIGDDVVDIEVMKKVGFP  122 (162)
T ss_dssp             ---------EEEC-----C--CHHHHHHH-----HHHTTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             ---------hccC-----CCCCHHHHHHH-----HHHcCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence                     1111     13345544432     2222211122 45789999999999999995

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.09  E-value=1e-05  Score=75.02  Aligned_cols=109  Identities=24%  Similarity=0.321  Sum_probs=70.1

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCC----cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDW----AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  433 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw----~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l  433 (567)
                      -|+||||+||||+.+..   ++...++..    ...|+  +...++++||++.-+|+++...+   +..++.     .++
T Consensus        12 ~k~vifD~DGTL~d~~~---~~~~~~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~---~~~~~~-----lgi   78 (176)
T 3mmz_A           12 IDAVVLDFDGTQTDDRV---LIDSDGREFVSVHRGDGL--GIAALRKSGLTMLILSTEQNPVV---AARARK-----LKI   78 (176)
T ss_dssp             CSEEEECCTTTTSCSCC---EECTTCCEEEEEEHHHHH--HHHHHHHTTCEEEEEESSCCHHH---HHHHHH-----HTC
T ss_pred             CCEEEEeCCCCcCcCCE---eecCCccHhHhcccccHH--HHHHHHHCCCeEEEEECcChHHH---HHHHHH-----cCC
Confidence            47899999999998433   122222221    22333  78899999999999999987655   555655     445


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        434 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       434 P~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      .   ++...              +|   |.+.++.+...+.-.... ...+|+..+|+.+-+++|++
T Consensus        79 ~---~~~~~--------------~~---k~~~l~~~~~~~~~~~~~-~~~vGD~~nD~~~~~~ag~~  124 (176)
T 3mmz_A           79 P---VLHGI--------------DR---KDLALKQWCEEQGIAPER-VLYVGNDVNDLPCFALVGWP  124 (176)
T ss_dssp             C---EEESC--------------SC---HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             e---eEeCC--------------CC---hHHHHHHHHHHcCCCHHH-EEEEcCCHHHHHHHHHCCCe
Confidence            4   22211              23   444555555433322223 45799999999999999975

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.08  E-value=2.7e-06  Score=84.86  Aligned_cols=113  Identities=16%  Similarity=0.223  Sum_probs=72.8

Q ss_pred             CCeEEEEecCCccccCCcc-----cccccccCc----------CCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHH
Q psy12533        357 NDKIVISDIDGTITKSDVL-----GHVLPIMGK----------DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTRE  421 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~-----G~~~~~~Gk----------Dw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~  421 (567)
                      .-++|||||||||+.+...     ...... ..          ...-||+.++++.++++|++|.++|+|+..+...+..
T Consensus        58 ~~kavifDlDGTLld~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~  136 (258)
T 2i33_A           58 KKPAIVLDLDETVLDNSPHQAMSVKTGKGY-PYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIK  136 (258)
T ss_dssp             SEEEEEECSBTTTEECHHHHHHHHHHSCCT-TTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHH
T ss_pred             CCCEEEEeCcccCcCCHHHHHHHHhcccch-HHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH
Confidence            4478999999999988410     000000 11          2356899999999999999999999999888888888


Q ss_pred             HHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhH
Q psy12533        422 YLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSY  494 (567)
Q Consensus       422 ~L~~~~Q~~~~lP~---GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY  494 (567)
                      .|..     .+|+.   --++++++..          .+|+..+.     +...   +..+ ..-+|+..+|+.+=
T Consensus       137 ~L~~-----~Gl~~v~~~~vi~~~~~~----------~K~~~~~~-----~~~~---~~~~-~l~VGDs~~Di~aA  188 (258)
T 2i33_A          137 NLER-----VGAPQATKEHILLQDPKE----------KGKEKRRE-----LVSQ---THDI-VLFFGDNLSDFTGF  188 (258)
T ss_dssp             HHHH-----HTCSSCSTTTEEEECTTC----------CSSHHHHH-----HHHH---HEEE-EEEEESSGGGSTTC
T ss_pred             HHHH-----cCCCcCCCceEEECCCCC----------CCcHHHHH-----HHHh---CCCc-eEEeCCCHHHhccc
Confidence            8877     56651   1233333311          12332221     1111   1222 55699999999874

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.08  E-value=1.7e-05  Score=73.66  Aligned_cols=129  Identities=17%  Similarity=0.191  Sum_probs=80.3

Q ss_pred             CcEEEEecCCccccCCc---cccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533         83 DKIVISDIDGTITKSDV---LGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  159 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~---lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP  159 (567)
                      -|+|+||+||||+....   ..+++.....-...+|+.++.+.++++||++.-+|+++.......+..|+.     .+|.
T Consensus         3 ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~-----~gl~   77 (189)
T 3ib6_A            3 LTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN-----FGII   77 (189)
T ss_dssp             CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-----TTCG
T ss_pred             ceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh-----cCch
Confidence            47899999999988443   223332223335778999999999999999999999988766777888877     4432


Q ss_pred             C--CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCc-ccchhhhhhcCCC
Q psy12533        160 E--GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNK-VNDVWSYQAVGIP  225 (567)
Q Consensus       160 ~--GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr-~tDv~aY~~vGIp  225 (567)
                      .  --++.+.+..-.   ......+|+.|+..+ +.+    .-...- ..-+|++ .+|+.+=+++|+.
T Consensus        78 ~~fd~i~~~~~~~~~---~~~~KP~p~~~~~~~-~~~----~~~~~~-~l~VGD~~~~Di~~A~~aG~~  137 (189)
T 3ib6_A           78 DYFDFIYASNSELQP---GKMEKPDKTIFDFTL-NAL----QIDKTE-AVMVGNTFESDIIGANRAGIH  137 (189)
T ss_dssp             GGEEEEEECCTTSST---TCCCTTSHHHHHHHH-HHH----TCCGGG-EEEEESBTTTTHHHHHHTTCE
T ss_pred             hheEEEEEccccccc---cCCCCcCHHHHHHHH-HHc----CCCccc-EEEECCCcHHHHHHHHHCCCe
Confidence            1  012222211000   000123344454333 222    111112 4567899 7999999999996

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=98.05  E-value=4.5e-06  Score=80.65  Aligned_cols=53  Identities=17%  Similarity=0.221  Sum_probs=43.0

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      |+|++|+||||..++.           -..+.+.+..++++++|++++.+|||+....   +.++..
T Consensus         6 kli~~DlDGTLl~~~~-----------~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~---~~~~~~   58 (227)
T 1l6r_A            6 RLAAIDVDGNLTDRDR-----------LISTKAIESIRSAEKKGLTVSLLSGNVIPVV---YALKIF   58 (227)
T ss_dssp             CEEEEEHHHHSBCTTS-----------CBCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH
T ss_pred             EEEEEECCCCCcCCCC-----------cCCHHHHHHHHHHHHCCCEEEEECCCCcHHH---HHHHHH
Confidence            7899999999998741           2356788999999999999999999987654   555554

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.05  E-value=6e-06  Score=74.32  Aligned_cols=112  Identities=21%  Similarity=0.247  Sum_probs=70.7

Q ss_pred             CcEEEEecCCccccCCcccccccccccc--ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKD--WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  160 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkD--wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~  160 (567)
                      -|+|+||+||||+.++..   ++.-++.  .-.++..++.+.++++|+++..+|+|+..   .++.+++.     .++..
T Consensus         9 ~k~v~~DlDGTL~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~---~~~~~l~~-----~gl~~   77 (162)
T 2p9j_A            9 LKLLIMDIDGVLTDGKLY---YTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSA---PLITRLKE-----LGVEE   77 (162)
T ss_dssp             CCEEEECCTTTTSCSEEE---EETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCH---HHHHHHHH-----TTCCE
T ss_pred             eeEEEEecCcceECCcee---ecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcH---HHHHHHHH-----cCCHh
Confidence            478999999999987531   1111221  12467889999999999999999999854   44666766     34431


Q ss_pred             CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        161 GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       161 GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                               .|..     ...+|+.|     +.+...+.-...- ...+|++.+|+.+-+++|++
T Consensus        78 ---------~~~~-----~kp~~~~~-----~~~~~~~~~~~~~-~~~vGD~~~Di~~a~~ag~~  122 (162)
T 2p9j_A           78 ---------IYTG-----SYKKLEIY-----EKIKEKYSLKDEE-IGFIGDDVVDIEVMKKVGFP  122 (162)
T ss_dssp             ---------EEEC-----C--CHHHH-----HHHHHHTTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             ---------hccC-----CCCCHHHH-----HHHHHHcCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence                     1111     12334333     3333333211112 56788999999999999985

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.04  E-value=8e-06  Score=75.65  Aligned_cols=112  Identities=20%  Similarity=0.185  Sum_probs=72.2

Q ss_pred             CeEEEEecCCccccCCcccccccccCcC--CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKD--WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  435 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkD--w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~  435 (567)
                      -|+|+||+||||+.++.   .+..-|+.  .-.+...++.+.++++|+++..+|+|+...+   +..++.     .++..
T Consensus         8 ik~i~~DlDGTL~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~---~~~~~~-----lgl~~   76 (180)
T 1k1e_A            8 IKFVITDVDGVLTDGQL---HYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPIL---RRRIAD-----LGIKL   76 (180)
T ss_dssp             CCEEEEECTTTTSCSEE---EEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHH---HHHHHH-----HTCCE
T ss_pred             CeEEEEeCCCCcCCCCe---eeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHH---HHHHHH-----cCCce
Confidence            47899999999998752   11111221  2355678899999999999999999987554   555555     34431


Q ss_pred             CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        436 GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       436 GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                        .+       ..       .+|   |.+.++.+...+.-.... ...+|+..+|+.+-+++|+.
T Consensus        77 --~~-------~~-------~k~---k~~~~~~~~~~~~~~~~~-~~~vGD~~~Di~~~~~ag~~  121 (180)
T 1k1e_A           77 --FF-------LG-------KLE---KETACFDLMKQAGVTAEQ-TAYIGDDSVDLPAFAACGTS  121 (180)
T ss_dssp             --EE-------ES-------CSC---HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             --ee-------cC-------CCC---cHHHHHHHHHHcCCCHHH-EEEECCCHHHHHHHHHcCCe
Confidence              11       10       123   344444444332211222 56899999999999999986

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.04  E-value=3.1e-06  Score=84.46  Aligned_cols=71  Identities=18%  Similarity=0.222  Sum_probs=53.9

Q ss_pred             CcEEEEecCCccccCCcc-----cccccccccc----------ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHH
Q psy12533         83 DKIVISDIDGTITKSDVL-----GHVLPIMGKD----------WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREY  147 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~l-----G~il~~lGkD----------wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~  147 (567)
                      -++|||||||||+.+...     ....+. ...          -.-+|+.++++.++++|++|.++|+|+......+...
T Consensus        59 ~kavifDlDGTLld~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~  137 (258)
T 2i33_A           59 KPAIVLDLDETVLDNSPHQAMSVKTGKGY-PYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKN  137 (258)
T ss_dssp             EEEEEECSBTTTEECHHHHHHHHHHSCCT-TTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHH
T ss_pred             CCEEEEeCcccCcCCHHHHHHHHhcccch-HHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH
Confidence            368999999999988410     000011 222          2456999999999999999999999998888889999


Q ss_pred             HHhcccCCccCC
Q psy12533        148 LQSVKQEDLTLP  159 (567)
Q Consensus       148 L~~~~q~~~~LP  159 (567)
                      |..     .+|+
T Consensus       138 L~~-----~Gl~  144 (258)
T 2i33_A          138 LER-----VGAP  144 (258)
T ss_dssp             HHH-----HTCS
T ss_pred             HHH-----cCCC
Confidence            987     5665

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.03  E-value=1.2e-05  Score=74.40  Aligned_cols=120  Identities=15%  Similarity=0.106  Sum_probs=71.8

Q ss_pred             CCeEEEEecCCccccCCccccc------------ccccCcC-CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533        357 NDKIVISDIDGTITKSDVLGHV------------LPIMGKD-WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  423 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~------------~~~~GkD-w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L  423 (567)
                      .-|+|+||+||||+..-...++            ....... ...+|+.++.+.++++||++..+|+++.  ...++.+|
T Consensus        26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~--~~~~~~~l  103 (187)
T 2wm8_A           26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSE--IEGANQLL  103 (187)
T ss_dssp             SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSC--HHHHHHHH
T ss_pred             ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCC--hHHHHHHH
Confidence            3589999999999853221111            1011112 3578999999999999999999999973  23446667


Q ss_pred             HhcccCCccCCCCceecCCCchhhhhhhhhh-ccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        424 QSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI-EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       424 ~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi-~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +.     .++..         .|...  .+. ..+|+.|+     .+..-+.-.... ...+|++.+|+.+-+++|+.
T Consensus       104 ~~-----~gl~~---------~f~~~--~~~~~~k~~~~~-----~~~~~~~~~~~~-~~~igD~~~Di~~a~~aG~~  159 (187)
T 2wm8_A          104 EL-----FDLFR---------YFVHR--EIYPGSKITHFE-----RLQQKTGIPFSQ-MIFFDDERRNIVDVSKLGVT  159 (187)
T ss_dssp             HH-----TTCTT---------TEEEE--EESSSCHHHHHH-----HHHHHHCCCGGG-EEEEESCHHHHHHHHTTTCE
T ss_pred             HH-----cCcHh---------hccee--EEEeCchHHHHH-----HHHHHcCCChHH-EEEEeCCccChHHHHHcCCE
Confidence            66     44431         11100  000 12343333     222222211222 34689999999999999996

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=98.01  E-value=7.8e-06  Score=75.41  Aligned_cols=125  Identities=17%  Similarity=0.209  Sum_probs=70.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++...++++|+++..+|+.+..   .++..|+.     .++..  .+ ..+..+   ..+....+|   |-+.+
T Consensus        71 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~-----~~l~~--~f-~~~~i~---~~~~~~~kp---~~~~~  133 (205)
T 3m9l_A           71 PAPGAVELVRELAGRGYRLGILTRNARE---LAHVTLEA-----IGLAD--CF-AEADVL---GRDEAPPKP---HPGGL  133 (205)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHH-----TTCGG--GS-CGGGEE---CTTTSCCTT---SSHHH
T ss_pred             CCccHHHHHHHHHhcCCeEEEEeCCchH---HHHHHHHH-----cCchh--hc-CcceEE---eCCCCCCCC---CHHHH
Confidence            4569999999999999999999997643   44556655     33321  00 001111   123333444   33344


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccccccHHhHHhhh
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLV  257 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~v  257 (567)
                      +.+...+.-...- ...||++.+|+.+=+++|+.   ...++...+...+.......+...|-+++
T Consensus       134 ~~~~~~~g~~~~~-~i~iGD~~~Di~~a~~aG~~---~i~v~~~~~~~~~~ad~v~~~~~el~~~~  195 (205)
T 3m9l_A          134 LKLAEAWDVSPSR-MVMVGDYRFDLDCGRAAGTR---TVLVNLPDNPWPELTDWHARDCAQLRDLL  195 (205)
T ss_dssp             HHHHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE---EEECSSSSCSCGGGCSEECSSHHHHHHHH
T ss_pred             HHHHHHcCCCHHH-EEEECCCHHHHHHHHHcCCE---EEEEeCCCCcccccCCEEeCCHHHHHHHH
Confidence            4455444322223 56799999999999999984   23444433222322233445555555444

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.01  E-value=1.2e-05  Score=74.49  Aligned_cols=120  Identities=14%  Similarity=0.072  Sum_probs=71.4

Q ss_pred             CcEEEEecCCccccCCccccc------------ccccc-ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHH
Q psy12533         83 DKIVISDIDGTITKSDVLGHV------------LPIMG-KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ  149 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~i------------l~~lG-kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~  149 (567)
                      -|+|+||+||||+..-...++            ..... .-...+|+.++.+.++++||++..+|+++.  ...++.+|+
T Consensus        27 ~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~--~~~~~~~l~  104 (187)
T 2wm8_A           27 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSE--IEGANQLLE  104 (187)
T ss_dssp             CSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSC--HHHHHHHHH
T ss_pred             cCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCC--hHHHHHHHH
Confidence            579999999999853221111            00001 113567999999999999999999999973  234566776


Q ss_pred             hcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        150 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       150 ~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .     .++..         .|...   ++...|   |.+.+..+...+.-...- ...+|++.+|+.+-+++|+.
T Consensus       105 ~-----~gl~~---------~f~~~---~~~~~~---k~~~~~~~~~~~~~~~~~-~~~igD~~~Di~~a~~aG~~  159 (187)
T 2wm8_A          105 L-----FDLFR---------YFVHR---EIYPGS---KITHFERLQQKTGIPFSQ-MIFFDDERRNIVDVSKLGVT  159 (187)
T ss_dssp             H-----TTCTT---------TEEEE---EESSSC---HHHHHHHHHHHHCCCGGG-EEEEESCHHHHHHHHTTTCE
T ss_pred             H-----cCcHh---------hccee---EEEeCc---hHHHHHHHHHHcCCChHH-EEEEeCCccChHHHHHcCCE
Confidence            6     44431         11100   001112   223333333333211122 44688999999999999986

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=97.99  E-value=9.5e-06  Score=75.14  Aligned_cols=112  Identities=20%  Similarity=0.186  Sum_probs=72.1

Q ss_pred             CcEEEEecCCccccCCcccccccccccc--ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKD--WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  160 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkD--wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~  160 (567)
                      -|+|+||+||||+.++..   +..-|+.  +-.+...++.+.++++|+++..+|+|+...+   +..++.     .++..
T Consensus         8 ik~i~~DlDGTL~~~~~~---~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~---~~~~~~-----lgl~~   76 (180)
T 1k1e_A            8 IKFVITDVDGVLTDGQLH---YDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPIL---RRRIAD-----LGIKL   76 (180)
T ss_dssp             CCEEEEECTTTTSCSEEE---EETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHH---HHHHHH-----HTCCE
T ss_pred             CeEEEEeCCCCcCCCCee---eccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHH---HHHHHH-----cCCce
Confidence            478999999999987531   1111211  2345677899999999999999999987544   555555     33331


Q ss_pred             CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        161 GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       161 GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                        .       |..       .+|   |.+.++.+...+.-.... ...+|+..+|+.+-+++|+.
T Consensus        77 --~-------~~~-------~k~---k~~~~~~~~~~~~~~~~~-~~~vGD~~~Di~~~~~ag~~  121 (180)
T 1k1e_A           77 --F-------FLG-------KLE---KETACFDLMKQAGVTAEQ-TAYIGDDSVDLPAFAACGTS  121 (180)
T ss_dssp             --E-------EES-------CSC---HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             --e-------ecC-------CCC---cHHHHHHHHHHcCCCHHH-EEEECCCHHHHHHHHHcCCe
Confidence              1       110       123   455555554443211122 66889999999999999976

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.96  E-value=2.2e-05  Score=69.65  Aligned_cols=101  Identities=21%  Similarity=0.348  Sum_probs=64.0

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccc------------hHHHHHHHHhc
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ------------SRVTREYLQSV  426 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~q------------a~~Tr~~L~~~  426 (567)
                      |+|+||+||||+.++.. .+    ......+++.+.+++++++|++++.+|+|+...            ...+.+|++. 
T Consensus         2 k~i~~DlDGTL~~~~~~-~~----~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~~~~~i~~~~~~-   75 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANTS-DY----RNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDK-   75 (126)
T ss_dssp             CEEEECSTTTTBCCCCS-CG----GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHH-
T ss_pred             CEEEEecCCCCCCCCCC-cc----ccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhccccccccCHHHHHHHHHHHHH-
Confidence            68999999999987521 11    112345789999999999999999999998754            3455556655 


Q ss_pred             ccCCccCCCCce-----ecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhC
Q psy12533        427 KQEDLTLPEGPM-----LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALF  473 (567)
Q Consensus       427 ~Q~~~~lP~GPv-----l~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf  473 (567)
                          +++|-.-+     ++..++.+.    +--..+|+.|+..-+..|..++
T Consensus        76 ----~~~~~~~~~~~~~~~~~~~~y~----~~~~~~~~~~~~~~~~~i~~~~  119 (126)
T 1xpj_A           76 ----HQVPYDEILVGKPWCGHDGFYI----DDRAVRPSEFASMNLEEIHQLF  119 (126)
T ss_dssp             ----TTCCCSEEEECCCCCCTTCEEE----CTTEECHHHHHHCCHHHHHHHH
T ss_pred             ----cCCCEEEEEeCCCccCCCCEEE----cCCccCchHhHHhhHHHHHHHh
Confidence                55553222     333333321    1113467777664566666554

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=97.95  E-value=3.3e-05  Score=71.46  Aligned_cols=103  Identities=17%  Similarity=0.196  Sum_probs=61.6

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++++.++++||++..+|+.+..   ..+..|..     .++..     ..+..+.+  .++...+|  +.|+..
T Consensus        97 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~-----~~l~~-----~f~~~~~~--~~~~~~kp~~~~~~~~  161 (230)
T 3um9_A           97 PFADVPQALQQLRAAGLKTAILSNGSRH---SIRQVVGN-----SGLTN-----SFDHLISV--DEVRLFKPHQKVYELA  161 (230)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHH-----HTCGG-----GCSEEEEG--GGTTCCTTCHHHHHHH
T ss_pred             CCCCHHHHHHHHHhCCCeEEEEeCCCHH---HHHHHHHH-----CCChh-----hcceeEeh--hhcccCCCChHHHHHH
Confidence            5789999999999999999999998643   34555555     33321     01112111  12222344  444432


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  513 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  513 (567)
                       ++.+    .-.... ...||++.+|+.+=+++|+.   +..++..+..
T Consensus       162 -~~~~----~~~~~~-~~~iGD~~~Di~~a~~aG~~---~~~~~~~~~~  201 (230)
T 3um9_A          162 -MDTL----HLGESE-ILFVSCNSWDATGAKYFGYP---VCWINRSNGV  201 (230)
T ss_dssp             -HHHH----TCCGGG-EEEEESCHHHHHHHHHHTCC---EEEECTTSCC
T ss_pred             -HHHh----CCCccc-EEEEeCCHHHHHHHHHCCCE---EEEEeCCCCc
Confidence             2222    211222 35788999999999999994   5566665443

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=97.95  E-value=1.8e-05  Score=73.35  Aligned_cols=109  Identities=26%  Similarity=0.335  Sum_probs=70.3

Q ss_pred             CcEEEEecCCccccCCcccccccccccc----ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKD----WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  158 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkD----wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L  158 (567)
                      -|+||||+||||+.+...   +...+..    ....|+  +...++++|+++.-+|+++...+   +..++.     .++
T Consensus        12 ~k~vifD~DGTL~d~~~~---~~~~~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~---~~~~~~-----lgi   78 (176)
T 3mmz_A           12 IDAVVLDFDGTQTDDRVL---IDSDGREFVSVHRGDGL--GIAALRKSGLTMLILSTEQNPVV---AARARK-----LKI   78 (176)
T ss_dssp             CSEEEECCTTTTSCSCCE---ECTTCCEEEEEEHHHHH--HHHHHHHTTCEEEEEESSCCHHH---HHHHHH-----HTC
T ss_pred             CCEEEEeCCCCcCcCCEe---ecCCccHhHhcccccHH--HHHHHHHCCCeEEEEECcChHHH---HHHHHH-----cCC
Confidence            478999999999984331   1111221    122233  78889999999999999886555   555655     444


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .   ++..            .  +|   |-+.++.+...+.-.... ...+|+..+|+.+-+.+|++
T Consensus        79 ~---~~~~------------~--~~---k~~~l~~~~~~~~~~~~~-~~~vGD~~nD~~~~~~ag~~  124 (176)
T 3mmz_A           79 P---VLHG------------I--DR---KDLALKQWCEEQGIAPER-VLYVGNDVNDLPCFALVGWP  124 (176)
T ss_dssp             C---EEES------------C--SC---HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             e---eEeC------------C--CC---hHHHHHHHHHHcCCCHHH-EEEEcCCHHHHHHHHHCCCe
Confidence            4   2211            1  23   555666665554322222 56799999999999999965

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=97.91  E-value=3e-05  Score=71.54  Aligned_cols=127  Identities=13%  Similarity=0.147  Sum_probs=77.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKI  463 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~---GPvl~spd~l~~al~rEvi~k~p~~fK~  463 (567)
                      ..+|+.++.+.++++ |++..+|+.+.   ..++..++.     .++..   ..+.++.+..+.   .. ..++| ..|.
T Consensus        70 ~~~g~~~~l~~l~~~-~~~~i~s~~~~---~~~~~~l~~-----~gl~~~f~~~~~~~~~~~~~---~~-~~p~p-~~~~  135 (206)
T 1rku_A           70 PLEGAVEFVDWLRER-FQVVILSDTFY---EFSQPLMRQ-----LGFPTLLCHKLEIDDSDRVV---GY-QLRQK-DPKR  135 (206)
T ss_dssp             CCTTHHHHHHHHHTT-SEEEEEEEEEH---HHHHHHHHH-----TTCCCEEEEEEEECTTSCEE---EE-ECCSS-SHHH
T ss_pred             CCccHHHHHHHHHhc-CcEEEEECChH---HHHHHHHHH-----cCCcceecceeEEcCCceEE---ee-ecCCC-chHH
Confidence            468999999999999 99999999754   345666766     45542   112222222110   00 02456 5566


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccc-cccHhhHHhhhhhcC
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTF-QSTYSNMSYLVDQMF  536 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~-~~sY~~l~~~vd~~F  536 (567)
                      .+++.+..- |  . . ...+|++.+|+.+-+++|+.    +++++..++........ ..+...|.+++..++
T Consensus       136 ~~l~~l~~~-~--~-~-~~~iGD~~~Di~~a~~aG~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  200 (206)
T 1rku_A          136 QSVIAFKSL-Y--Y-R-VIAAGDSYNDTTMLSEAHAG----ILFHAPENVIREFPQFPAVHTYEDLKREFLKAS  200 (206)
T ss_dssp             HHHHHHHHT-T--C-E-EEEEECSSTTHHHHHHSSEE----EEESCCHHHHHHCTTSCEECSHHHHHHHHHHHC
T ss_pred             HHHHHHHhc-C--C-E-EEEEeCChhhHHHHHhcCcc----EEECCcHHHHHHHhhhccccchHHHHHHHHHHh
Confidence            677776541 1  2 2 46899999999999999995    34566544433211121 456666666665554

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=97.91  E-value=1.3e-05  Score=74.87  Aligned_cols=122  Identities=15%  Similarity=0.174  Sum_probs=69.8

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhcc--ChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEK--KPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k--~p~~fK~~  464 (567)
                      ..+|+.++++.++++||++..+|+.+..   .++..|+.     .++..  .   .+..+.  ..++...  +|+.|+..
T Consensus       104 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~---~~~~~l~~-----~gl~~--~---f~~i~~--~~~~~~~Kp~~~~~~~~  168 (231)
T 3kzx_A          104 LNDGAIELLDTLKENNITMAIVSNKNGE---RLRSEIHH-----KNLTH--Y---FDSIIG--SGDTGTIKPSPEPVLAA  168 (231)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHH-----TTCGG--G---CSEEEE--ETSSSCCTTSSHHHHHH
T ss_pred             ECcCHHHHHHHHHHCCCeEEEEECCCHH---HHHHHHHH-----CCchh--h---eeeEEc--ccccCCCCCChHHHHHH
Confidence            5789999999999999999999987643   34555655     33321  0   011111  1122223  34555543


Q ss_pred             HHHHHHhhCCCCCC-CEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhhHHhhhhhc
Q psy12533        465 CLRDIMALFPPNTQ-PFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQM  535 (567)
Q Consensus       465 ~L~~i~~lf~~~~~-pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~  535 (567)
                      + +.+    .-... - ...+|++.+|+.+=+++|+.   ...++.......   .....++..|.++++.+
T Consensus       169 ~-~~l----gi~~~~~-~v~vGD~~~Di~~a~~aG~~---~v~~~~~~~~~~---~~~~~~~~el~~~l~~~  228 (231)
T 3kzx_A          169 L-TNI----NIEPSKE-VFFIGDSISDIQSAIEAGCL---PIKYGSTNIIKD---ILSFKNFYDIRNFICQL  228 (231)
T ss_dssp             H-HHH----TCCCSTT-EEEEESSHHHHHHHHHTTCE---EEEECC-----C---CEEESSHHHHHHHHHHH
T ss_pred             H-HHc----CCCcccC-EEEEcCCHHHHHHHHHCCCe---EEEECCCCCCCC---ceeeCCHHHHHHHHHHH
Confidence            2 222    11111 2 45899999999999999974   345565433211   12456677777666543

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=97.90  E-value=2.1e-05  Score=70.84  Aligned_cols=110  Identities=19%  Similarity=0.266  Sum_probs=68.4

Q ss_pred             CeEEEEecCCccccCCcccccccccCc---CC-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGK---DW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  433 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~Gk---Dw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l  433 (567)
                      -|+|+||+||||+.+...   +...++   .| .+.|+  +.+.++++||++..+|+++...+   +..++.     .++
T Consensus         4 ik~vifD~DGTL~~~~~~---~~~~~~~~~~~~~~~~~--~l~~l~~~g~~~~i~T~~~~~~~---~~~~~~-----~gl   70 (164)
T 3e8m_A            4 IKLILTDIDGVWTDGGMF---YDQTGNEWKKFNTSDSA--GIFWAHNKGIPVGILTGEKTEIV---RRRAEK-----LKV   70 (164)
T ss_dssp             CCEEEECSTTTTSSSEEE---ECSSSCEEEEEEGGGHH--HHHHHHHTTCCEEEECSSCCHHH---HHHHHH-----TTC
T ss_pred             ceEEEEcCCCceEcCcEE---EcCCCcEEEEecCChHH--HHHHHHHCCCEEEEEeCCChHHH---HHHHHH-----cCC
Confidence            578999999999987521   111122   22 33343  68889999999999999976554   566665     444


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        434 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       434 P~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +.         .|..     +.++|+.++     .+...+.-.... ...+|++.+|+.+-+++|+.
T Consensus        71 ~~---------~~~~-----~kpk~~~~~-----~~~~~~~~~~~~-~~~vGD~~~Di~~~~~ag~~  117 (164)
T 3e8m_A           71 DY---------LFQG-----VVDKLSAAE-----ELCNELGINLEQ-VAYIGDDLNDAKLLKRVGIA  117 (164)
T ss_dssp             SE---------EECS-----CSCHHHHHH-----HHHHHHTCCGGG-EEEECCSGGGHHHHTTSSEE
T ss_pred             CE---------eecc-----cCChHHHHH-----HHHHHcCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence            31         1111     133334443     333322211222 46899999999999999984

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=97.89  E-value=2.2e-05  Score=70.74  Aligned_cols=113  Identities=19%  Similarity=0.215  Sum_probs=68.3

Q ss_pred             CcEEEEecCCccccCCcc-ccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533         83 DKIVISDIDGTITKSDVL-GHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  161 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~l-G~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G  161 (567)
                      -|+|+||+||||+.+... ...-..+.+-..+.|+  +.+.++++|+++..+|+++...+   +..++.     .+++. 
T Consensus         4 ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~--~l~~l~~~g~~~~i~T~~~~~~~---~~~~~~-----~gl~~-   72 (164)
T 3e8m_A            4 IKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSA--GIFWAHNKGIPVGILTGEKTEIV---RRRAEK-----LKVDY-   72 (164)
T ss_dssp             CCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHH--HHHHHHHTTCCEEEECSSCCHHH---HHHHHH-----TTCSE-
T ss_pred             ceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHH--HHHHHHHCCCEEEEEeCCChHHH---HHHHHH-----cCCCE-
Confidence            578999999999987531 0000011111123343  68889999999999999876544   556665     44431 


Q ss_pred             ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        162 PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       162 Plllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                              .+..     +  +|   |-+.++.+...+.-...- ...+|++.+|+.+-+++|++
T Consensus        73 --------~~~~-----~--kp---k~~~~~~~~~~~~~~~~~-~~~vGD~~~Di~~~~~ag~~  117 (164)
T 3e8m_A           73 --------LFQG-----V--VD---KLSAAEELCNELGINLEQ-VAYIGDDLNDAKLLKRVGIA  117 (164)
T ss_dssp             --------EECS-----C--SC---HHHHHHHHHHHHTCCGGG-EEEECCSGGGHHHHTTSSEE
T ss_pred             --------eecc-----c--CC---hHHHHHHHHHHcCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence                    1111     1  33   444444444333211122 56789999999999999984

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.88  E-value=3.8e-05  Score=68.10  Aligned_cols=100  Identities=20%  Similarity=0.328  Sum_probs=62.5

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccc------------hHHHHHHHHhc
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ------------SRVTREYLQSV  151 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~------------a~~Tr~~L~~~  151 (567)
                      |+|+||+||||+.++.. .+    ......+++.+..++++++|++++.+|+|+...            ...+.+|++. 
T Consensus         2 k~i~~DlDGTL~~~~~~-~~----~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~~~~~i~~~~~~-   75 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANTS-DY----RNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDK-   75 (126)
T ss_dssp             CEEEECSTTTTBCCCCS-CG----GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHH-
T ss_pred             CEEEEecCCCCCCCCCC-cc----ccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhccccccccCHHHHHHHHHHHHH-
Confidence            68999999999987531 11    111245789999999999999999999998754            4455666655 


Q ss_pred             ccCCccCCCCce-----ecCCCchhhhhhhhhhccChhHHHHHHHHHHHHh
Q psy12533        152 KQEDLTLPEGPM-----LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMAL  197 (567)
Q Consensus       152 ~q~~~~LP~GPl-----llsp~~l~~al~REvi~k~p~~fKi~~L~~i~~l  197 (567)
                          +++|-.-+     ++..+..+-    +--..+|+.|+-.-+..|..+
T Consensus        76 ----~~~~~~~~~~~~~~~~~~~~y~----~~~~~~~~~~~~~~~~~i~~~  118 (126)
T 1xpj_A           76 ----HQVPYDEILVGKPWCGHDGFYI----DDRAVRPSEFASMNLEEIHQL  118 (126)
T ss_dssp             ----TTCCCSEEEECCCCCCTTCEEE----CTTEECHHHHHHCCHHHHHHH
T ss_pred             ----cCCCEEEEEeCCCccCCCCEEE----cCCccCchHhHHhhHHHHHHH
Confidence                45553222     223333221    112345777765445555544

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=97.88  E-value=6.1e-06  Score=76.08  Aligned_cols=112  Identities=21%  Similarity=0.243  Sum_probs=66.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhh-hhhhhhccChhHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNA-FHTEVIEKKPQEFKI  463 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~a-l~rEvi~k~p~~fK~  463 (567)
                      ..+|+.++++.++++||++..+|+.+..   .++.+++.     .++..  ..++...++.+.. +..++...+|   |-
T Consensus        76 ~~~~~~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~-----~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~---k~  144 (217)
T 3m1y_A           76 LFEGALELVSALKEKNYKVVCFSGGFDL---ATNHYRDL-----LHLDAAFSNTLIVENDALNGLVTGHMMFSHS---KG  144 (217)
T ss_dssp             BCBTHHHHHHHHHTTTEEEEEEEEEEHH---HHHHHHHH-----HTCSEEEEEEEEEETTEEEEEEEESCCSTTH---HH
T ss_pred             CCCCHHHHHHHHHHCCCEEEEEcCCchh---HHHHHHHH-----cCcchhccceeEEeCCEEEeeeccCCCCCCC---hH
Confidence            5779999999999999999999996543   44566665     33431  1111111111000 1112222344   44


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccc
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK  514 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~  514 (567)
                      +.++.+...++-.... ...||+..+|+.+-+++|++.    .+|+.-+++
T Consensus       145 ~~~~~~~~~~g~~~~~-~i~vGDs~~Di~~a~~aG~~~----~~~~~~~l~  190 (217)
T 3m1y_A          145 EMLLVLQRLLNISKTN-TLVVGDGANDLSMFKHAHIKI----AFNAKEVLK  190 (217)
T ss_dssp             HHHHHHHHHHTCCSTT-EEEEECSGGGHHHHTTCSEEE----EESCCHHHH
T ss_pred             HHHHHHHHHcCCCHhH-EEEEeCCHHHHHHHHHCCCeE----EECccHHHH
Confidence            4555544433322223 458999999999999999963    457765554

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=97.85  E-value=2e-05  Score=73.91  Aligned_cols=111  Identities=14%  Similarity=0.072  Sum_probs=68.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC----CCchhhhhhhhhhccCh-hHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN----PTSLLNAFHTEVIEKKP-QEF  461 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~s----pd~l~~al~rEvi~k~p-~~f  461 (567)
                      ..||+.++...++++||++.-+|+.+...   ++.+++.     .+++  .++.+    .++.+.   .++....+ ..-
T Consensus        93 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~---~~~~~~~-----~g~~--~~~~~~~~~~~~~~~---g~~~~~~~~~~~  159 (232)
T 3fvv_A           93 LTVQAVDVVRGHLAAGDLCALVTATNSFV---TAPIARA-----FGVQ--HLIATDPEYRDGRYT---GRIEGTPSFREG  159 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHH-----TTCC--EEEECEEEEETTEEE---EEEESSCSSTHH
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHH-----cCCC--EEEEcceEEECCEEe---eeecCCCCcchH
Confidence            37899999999999999999999987544   4666666     4443  12111    111110   00000001 133


Q ss_pred             HHHHHHHHHhhCC---CCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533        462 KISCLRDIMALFP---PNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  515 (567)
Q Consensus       462 K~~~L~~i~~lf~---~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  515 (567)
                      |.+.++.+....+   -.... ...+|+..+|+.+-+.+|++    +.++|+.++..
T Consensus       160 K~~~~~~~~~~~~~~~~~~~~-~~~vGDs~~D~~~~~~ag~~----~~~~~~~~l~~  211 (232)
T 3fvv_A          160 KVVRVNQWLAGMGLALGDFAE-SYFYSDSVNDVPLLEAVTRP----IAANPSPGLRE  211 (232)
T ss_dssp             HHHHHHHHHHHTTCCGGGSSE-EEEEECCGGGHHHHHHSSEE----EEESCCHHHHH
T ss_pred             HHHHHHHHHHHcCCCcCchhh-eEEEeCCHhhHHHHHhCCCe----EEECcCHHHHH
Confidence            6666666655333   11122 46899999999999999976    47888866643

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=97.84  E-value=3.1e-05  Score=71.91  Aligned_cols=122  Identities=15%  Similarity=0.075  Sum_probs=69.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++++.++++||++..+|+.+...   .+..|..     .++..     ..+..+.+  .++...+|  +.|+..
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~l~~-----~~l~~-----~f~~~~~~--~~~~~~kp~~~~~~~~  164 (233)
T 3umb_A          100 AFPENVPVLRQLREMGLPLGILSNGNPQM---LEIAVKS-----AGMSG-----LFDHVLSV--DAVRLYKTAPAAYALA  164 (233)
T ss_dssp             ECTTHHHHHHHHHTTTCCEEEEESSCHHH---HHHHHHT-----TTCTT-----TCSEEEEG--GGTTCCTTSHHHHTHH
T ss_pred             CCCCHHHHHHHHHhCCCcEEEEeCCCHHH---HHHHHHH-----CCcHh-----hcCEEEEe--cccCCCCcCHHHHHHH
Confidence            36899999999999999999999976433   3555555     33321     01112211  12223344  444432


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccccc---ccccccHhhHHhhh
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMT---QTFQSTYSNMSYLV  532 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~---~~~~~sY~~l~~~v  532 (567)
                       ++.+.    -.... ...+|++.+|+.+=+++|+.   +..|+..+.-..+..   .....+...|.+++
T Consensus       165 -~~~~~----~~~~~-~~~vGD~~~Di~~a~~~G~~---~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l  226 (233)
T 3umb_A          165 -PRAFG----VPAAQ-ILFVSSNGWDACGATWHGFT---TFWINRLGHPPEALDVAPAAAGHDMRDLLQFV  226 (233)
T ss_dssp             -HHHHT----SCGGG-EEEEESCHHHHHHHHHHTCE---EEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred             -HHHhC----CCccc-EEEEeCCHHHHHHHHHcCCE---EEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence             33321    11122 34778999999999999996   455565444333321   12345555555544

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=97.83  E-value=3.3e-05  Score=73.24  Aligned_cols=132  Identities=11%  Similarity=0.024  Sum_probs=78.0

Q ss_pred             eCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCccc------------chHHHHHH
Q psy12533        355 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG------------QSRVTREY  422 (567)
Q Consensus       355 ~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~------------qa~~Tr~~  422 (567)
                      ...-|++++|+||||+...   .+..........+|+.++++.++++||++..+|+++..            ....++..
T Consensus        28 ~~~~k~i~~D~DGtl~~~~---~y~~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~  104 (218)
T 2o2x_A           28 PPHLPALFLDRDGTINVDT---DYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLEL  104 (218)
T ss_dssp             CSSCCCEEECSBTTTBCCC---SCTTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEeCCCCcCCCC---cccCCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHH
Confidence            3456889999999999763   22222112236899999999999999999999999751            01345566


Q ss_pred             HHhcccCCccCCCCceecCCCc---hhhhhhhhhhcc--ChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc
Q psy12533        423 LQSVKQEDLTLPEGPMLLNPTS---LLNAFHTEVIEK--KPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV  497 (567)
Q Consensus       423 L~~~~Q~~~~lP~GPvl~spd~---l~~al~rEvi~k--~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v  497 (567)
                      |+.     .+++--.++.++..   -+.....++...  +|+.|+..+ +.+. + .+ ..  ...+|++.+|+.+=+++
T Consensus       105 l~~-----~gl~~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~-~~~~-i-~~-~~--~~~VGD~~~Di~~a~~a  173 (218)
T 2o2x_A          105 LRE-----EGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAG-KRLA-L-DL-QR--SLIVGDKLADMQAGKRA  173 (218)
T ss_dssp             HHH-----TTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHH-HHHT-C-CG-GG--CEEEESSHHHHHHHHHT
T ss_pred             HHH-----cCCceeeEEEeecCCCCceeecccCCccCCCCHHHHHHHH-HHcC-C-CH-HH--EEEEeCCHHHHHHHHHC
Confidence            655     44432122222210   000000122233  445666543 2221 1 11 22  24789999999999999


Q ss_pred             CCC
Q psy12533        498 GIP  500 (567)
Q Consensus       498 GIp  500 (567)
                      |+.
T Consensus       174 G~~  176 (218)
T 2o2x_A          174 GLA  176 (218)
T ss_dssp             TCS
T ss_pred             CCC
Confidence            996

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=97.82  E-value=2.4e-05  Score=75.55  Aligned_cols=54  Identities=17%  Similarity=0.194  Sum_probs=42.6

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|++|+||||+.++.           ...+...+..++++++|++++.+|+|+....   +.+++.
T Consensus         5 ~kli~~DlDGTLl~~~~-----------~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~---~~~~~~   58 (227)
T 1l6r_A            5 IRLAAIDVDGNLTDRDR-----------LISTKAIESIRSAEKKGLTVSLLSGNVIPVV---YALKIF   58 (227)
T ss_dssp             CCEEEEEHHHHSBCTTS-----------CBCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH
T ss_pred             eEEEEEECCCCCcCCCC-----------cCCHHHHHHHHHHHHCCCEEEEECCCCcHHH---HHHHHH
Confidence            37899999999998752           1245688899999999999999999987654   445444

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=97.81  E-value=6.3e-05  Score=69.50  Aligned_cols=124  Identities=16%  Similarity=0.117  Sum_probs=68.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++.+.++++||++..+|+.+.   ...+..|+.     .++..  .   .+..+.+  .++...+|+   -+.+
T Consensus        97 ~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~-----~~l~~--~---f~~~~~~--~~~~~~kp~---~~~~  158 (230)
T 3um9_A           97 PFADVPQALQQLRAAGLKTAILSNGSR---HSIRQVVGN-----SGLTN--S---FDHLISV--DEVRLFKPH---QKVY  158 (230)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHH-----HTCGG--G---CSEEEEG--GGTTCCTTC---HHHH
T ss_pred             CCCCHHHHHHHHHhCCCeEEEEeCCCH---HHHHHHHHH-----CCChh--h---cceeEeh--hhcccCCCC---hHHH
Confidence            457999999999999999999999764   334555554     22221  0   0111111  122233442   2223


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecccc---ccccccHHhHHhhh
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMT---QTFQSTYSNMSYLV  257 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~---~~~~~sY~~l~~~v  257 (567)
                      ..+...+.-...- ...||++.+|+.+=+++|+.   +..++..+....+..   .....+...|.+++
T Consensus       159 ~~~~~~~~~~~~~-~~~iGD~~~Di~~a~~aG~~---~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l  223 (230)
T 3um9_A          159 ELAMDTLHLGESE-ILFVSCNSWDATGAKYFGYP---VCWINRSNGVFDQLGVVPDIVVSDVGVLASRF  223 (230)
T ss_dssp             HHHHHHHTCCGGG-EEEEESCHHHHHHHHHHTCC---EEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred             HHHHHHhCCCccc-EEEEeCCHHHHHHHHHCCCE---EEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence            3333322211122 45678889999999999984   456666544333221   12345555555544

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=97.81  E-value=7.8e-05  Score=63.87  Aligned_cols=108  Identities=19%  Similarity=0.202  Sum_probs=68.2

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |+|++|+||||+.+            ....||+.++.+.++++||++..+|+++....   +..|+.     .++..   
T Consensus         3 k~i~~D~DgtL~~~------------~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~---~~~l~~-----~~l~~---   59 (137)
T 2pr7_A            3 RGLIVDYAGVLDGT------------DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLG---AAPIRE-----LETNG---   59 (137)
T ss_dssp             CEEEECSTTTTSSC------------HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGG---GHHHHH-----HHHTT---
T ss_pred             cEEEEeccceecCC------------CccCccHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----CChHh---
Confidence            78999999999533            22578999999999999999999999987654   333433     22211   


Q ss_pred             ecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        439 LLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       439 l~spd~l~~al~rEvi~k~p--~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                        .-+..+.  ..++...+|  +.|... ++.+    .-.... ..-+|++.+|+.+-+++|+
T Consensus        60 --~f~~i~~--~~~~~~~Kp~~~~~~~~-~~~~----~~~~~~-~~~vgD~~~di~~a~~~G~  112 (137)
T 2pr7_A           60 --VVDKVLL--SGELGVEKPEEAAFQAA-ADAI----DLPMRD-CVLVDDSILNVRGAVEAGL  112 (137)
T ss_dssp             --SSSEEEE--HHHHSCCTTSHHHHHHH-HHHT----TCCGGG-EEEEESCHHHHHHHHHHTC
T ss_pred             --hccEEEE--eccCCCCCCCHHHHHHH-HHHc----CCCccc-EEEEcCCHHHHHHHHHCCC
Confidence              0122221  123333445  444432 3322    111112 3468999999999999999

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=97.81  E-value=2.8e-05  Score=75.08  Aligned_cols=111  Identities=15%  Similarity=0.274  Sum_probs=70.8

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCC----cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDW----AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  432 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw----~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~  432 (567)
                      .-|+||||+||||+.|..   ++...|...    ...|+  +...++++||++.-+|+++...+   +..++.     .+
T Consensus        48 ~ik~viFDlDGTL~Ds~~---~~~~~~~~~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~~~~---~~~l~~-----lg  114 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLI---YMGNQGEELKAFNVRDGY--GIRCLITSDIDVAIITGRRAKLL---EDRANT-----LG  114 (211)
T ss_dssp             TCSEEEECCTTTTSSSEE---EEETTSCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHH---HHHHHH-----HT
T ss_pred             CCCEEEEeCCCCEECCHH---HHhhhhHHHHHhccchHH--HHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----cC
Confidence            458899999999998852   222222222    22333  78899999999999999977655   556655     34


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        433 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       433 lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +..         .|..     +..     |.+.++.++..+.-.... .+.+|+..+|+.+-+++|++
T Consensus       115 i~~---------~f~~-----~k~-----K~~~l~~~~~~lg~~~~~-~~~vGDs~nDi~~~~~ag~~  162 (211)
T 3ij5_A          115 ITH---------LYQG-----QSD-----KLVAYHELLATLQCQPEQ-VAYIGDDLIDWPVMAQVGLS  162 (211)
T ss_dssp             CCE---------EECS-----CSS-----HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHTTSSEE
T ss_pred             Cch---------hhcc-----cCC-----hHHHHHHHHHHcCcCcce-EEEEcCCHHHHHHHHHCCCE
Confidence            431         2211     122     334444444433322223 56899999999999999986

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.80  E-value=8.3e-05  Score=69.53  Aligned_cols=110  Identities=18%  Similarity=0.305  Sum_probs=71.2

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcC---C-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKD---W-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  432 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkD---w-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~  432 (567)
                      .-|+||+|||||+|.+.+   +++.-|+-   | .+.+.  ..+.++++|+++.-+|++     ..++..++.+   ..+
T Consensus         8 ~ikliv~D~DGtL~d~~~---~~~~~g~~~~~f~~~D~~--~L~~Lk~~Gi~~~I~Tg~-----~~~~~~l~~l---~lg   74 (168)
T 3ewi_A            8 EIKLLVCNIDGCLTNGHI---YVSGDQKEIISYDVKDAI--GISLLKKSGIEVRLISER-----ACSKQTLSAL---KLD   74 (168)
T ss_dssp             CCCEEEEECCCCCSCSCC---BCCSSCCCEEEEEHHHHH--HHHHHHHTTCEEEEECSS-----CCCHHHHHTT---CCC
T ss_pred             cCcEEEEeCccceECCcE---EEcCCCCEEEEEecCcHH--HHHHHHHCCCEEEEEeCc-----HHHHHHHHHh---CCC
Confidence            457899999999998753   23332322   2 23343  578899999999999999     2345556531   123


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        433 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       433 lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      ++   ++...            ..     |.+.|+.++..+.-.... .+.||+..+|+.+-+.+|++
T Consensus        75 i~---~~~g~------------~~-----K~~~l~~~~~~~gi~~~~-~~~vGD~~nDi~~~~~ag~~  121 (168)
T 3ewi_A           75 CK---TEVSV------------SD-----KLATVDEWRKEMGLCWKE-VAYLGNEVSDEECLKRVGLS  121 (168)
T ss_dssp             CC---EECSC------------SC-----HHHHHHHHHHHTTCCGGG-EEEECCSGGGHHHHHHSSEE
T ss_pred             cE---EEECC------------CC-----hHHHHHHHHHHcCcChHH-EEEEeCCHhHHHHHHHCCCE
Confidence            32   22110            11     566666666654422223 56899999999999999987

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.80  E-value=3.3e-05  Score=76.05  Aligned_cols=73  Identities=15%  Similarity=0.229  Sum_probs=52.6

Q ss_pred             eeeCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533        353 KWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  432 (567)
Q Consensus       353 lw~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~  432 (567)
                      .|...-|+|+||+||||..++.           -..+...+.+++++++|++++..|||+....   +.++..     .+
T Consensus        16 ~~~~~~kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~---~~~~~~-----l~   76 (285)
T 3pgv_A           16 YFQGMYQVVASDLDGTLLSPDH-----------FLTPYAKETLKLLTARGINFVFATGRHYIDV---GQIRDN-----LG   76 (285)
T ss_dssp             -----CCEEEEECCCCCSCTTS-----------CCCHHHHHHHHHHHTTTCEEEEECSSCGGGG---HHHHHH-----HC
T ss_pred             cccCcceEEEEeCcCCCCCCCC-----------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHh-----cC
Confidence            4777889999999999998741           1345688899999999999999999998866   556655     45


Q ss_pred             CCCCceecCCCch
Q psy12533        433 LPEGPMLLNPTSL  445 (567)
Q Consensus       433 lP~GPvl~spd~l  445 (567)
                      +| +|+++.....
T Consensus        77 ~~-~~~I~~nGa~   88 (285)
T 3pgv_A           77 IR-SYMITSNGAR   88 (285)
T ss_dssp             SC-CEEEEGGGTE
T ss_pred             CC-ccEEEcCCeE
Confidence            55 6766655433

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=97.80  E-value=4.6e-05  Score=71.03  Aligned_cols=120  Identities=14%  Similarity=0.163  Sum_probs=68.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccCh--hHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKP--QEFK  187 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p--~~fK  187 (567)
                      ..+|+.++.+.++++|+++..+|+.+.   ..++..|+.     .++..  --++.+.         ++...+|  +.|+
T Consensus       104 ~~~~~~~~l~~l~~~g~~~~i~T~~~~---~~~~~~l~~-----~gl~~~f~~i~~~~---------~~~~~Kp~~~~~~  166 (231)
T 3kzx_A          104 LNDGAIELLDTLKENNITMAIVSNKNG---ERLRSEIHH-----KNLTHYFDSIIGSG---------DTGTIKPSPEPVL  166 (231)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHH-----TTCGGGCSEEEEET---------SSSCCTTSSHHHH
T ss_pred             ECcCHHHHHHHHHHCCCeEEEEECCCH---HHHHHHHHH-----CCchhheeeEEccc---------ccCCCCCChHHHH
Confidence            456999999999999999999998754   344556655     23221  0111111         2223344  3443


Q ss_pred             HHHHHHHHHhCCCCCC-CEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccccccHHhHHhhhhhc
Q psy12533        188 ISCLRDIMALFPPNTQ-PFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQM  260 (567)
Q Consensus       188 i~~L~~i~~lf~~~~~-pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~  260 (567)
                      ..+     ..+.-... - ...+|++.+|+.+=+++|+..   ..++.......   .....++..|.++++.+
T Consensus       167 ~~~-----~~lgi~~~~~-~v~vGD~~~Di~~a~~aG~~~---v~~~~~~~~~~---~~~~~~~~el~~~l~~~  228 (231)
T 3kzx_A          167 AAL-----TNINIEPSKE-VFFIGDSISDIQSAIEAGCLP---IKYGSTNIIKD---ILSFKNFYDIRNFICQL  228 (231)
T ss_dssp             HHH-----HHHTCCCSTT-EEEEESSHHHHHHHHHTTCEE---EEECC-----C---CEEESSHHHHHHHHHHH
T ss_pred             HHH-----HHcCCCcccC-EEEEcCCHHHHHHHHHCCCeE---EEECCCCCCCC---ceeeCCHHHHHHHHHHH
Confidence            322     22221111 2 568899999999999999743   44555433211   12456777777766543

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=97.78  E-value=9.8e-06  Score=74.71  Aligned_cols=112  Identities=21%  Similarity=0.250  Sum_probs=65.6

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhh-hhhhhhccChhHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNA-FHTEVIEKKPQEFKI  188 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~a-l~REvi~k~p~~fKi  188 (567)
                      ..+|+.++.+.++++||++..+|+.+.   ...+.+++.     .++..  ..++...++.+.. +..++...+|   |-
T Consensus        76 ~~~~~~~~l~~l~~~g~~~~i~S~~~~---~~~~~~l~~-----~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~---k~  144 (217)
T 3m1y_A           76 LFEGALELVSALKEKNYKVVCFSGGFD---LATNHYRDL-----LHLDAAFSNTLIVENDALNGLVTGHMMFSHS---KG  144 (217)
T ss_dssp             BCBTHHHHHHHHHTTTEEEEEEEEEEH---HHHHHHHHH-----HTCSEEEEEEEEEETTEEEEEEEESCCSTTH---HH
T ss_pred             CCCCHHHHHHHHHHCCCEEEEEcCCch---hHHHHHHHH-----cCcchhccceeEEeCCEEEeeeccCCCCCCC---hH
Confidence            456999999999999999999999554   444566665     33331  1111111100000 0011222334   55


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCcee
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK  239 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~  239 (567)
                      +.++.+...+.-.... ...||+..+|+.+-+++|++.    .+|+.-+++
T Consensus       145 ~~~~~~~~~~g~~~~~-~i~vGDs~~Di~~a~~aG~~~----~~~~~~~l~  190 (217)
T 3m1y_A          145 EMLLVLQRLLNISKTN-TLVVGDGANDLSMFKHAHIKI----AFNAKEVLK  190 (217)
T ss_dssp             HHHHHHHHHHTCCSTT-EEEEECSGGGHHHHTTCSEEE----EESCCHHHH
T ss_pred             HHHHHHHHHcCCCHhH-EEEEeCCHHHHHHHHHCCCeE----EECccHHHH
Confidence            5556655544322223 568899999999999999863    447665443

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=97.75  E-value=2.8e-05  Score=75.02  Aligned_cols=111  Identities=15%  Similarity=0.271  Sum_probs=70.9

Q ss_pred             CCcEEEEecCCccccCCcccccccccccccc----chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWA----QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwt----h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      .-|+||||+||||+.|..   ++...+....    ..|+  +...++++|+++.-+|+++...+   +..++.     .+
T Consensus        48 ~ik~viFDlDGTL~Ds~~---~~~~~~~~~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~~~~---~~~l~~-----lg  114 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLI---YMGNQGEELKAFNVRDGY--GIRCLITSDIDVAIITGRRAKLL---EDRANT-----LG  114 (211)
T ss_dssp             TCSEEEECCTTTTSSSEE---EEETTSCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHH---HHHHHH-----HT
T ss_pred             CCCEEEEeCCCCEECCHH---HHhhhhHHHHHhccchHH--HHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----cC
Confidence            457899999999998852   1222222221    2233  78899999999999999876554   556655     33


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        158 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       158 LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      +.         ..|..     +..     |-+.++.++..+.-...- .+.+|+..+|+.+-+++|++
T Consensus       115 i~---------~~f~~-----~k~-----K~~~l~~~~~~lg~~~~~-~~~vGDs~nDi~~~~~ag~~  162 (211)
T 3ij5_A          115 IT---------HLYQG-----QSD-----KLVAYHELLATLQCQPEQ-VAYIGDDLIDWPVMAQVGLS  162 (211)
T ss_dssp             CC---------EEECS-----CSS-----HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHTTSSEE
T ss_pred             Cc---------hhhcc-----cCC-----hHHHHHHHHHHcCcCcce-EEEEcCCHHHHHHHHHCCCE
Confidence            42         12211     122     445555555443321222 67899999999999999976

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=97.74  E-value=5.7e-05  Score=68.28  Aligned_cols=100  Identities=14%  Similarity=0.155  Sum_probs=60.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~--p~~fK~~  464 (567)
                      ..+|+.++++.++++|+++..+|+.+..   .++..|+.     .++..     ..+..+.  ..++...+  |+.|+..
T Consensus        90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~-----~~l~~-----~f~~~~~--~~~~~~~kp~~~~~~~~  154 (214)
T 3e58_A           90 IFPDVLKVLNEVKSQGLEIGLASSSVKA---DIFRALEE-----NRLQG-----FFDIVLS--GEEFKESKPNPEIYLTA  154 (214)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHH-----TTCGG-----GCSEEEE--GGGCSSCTTSSHHHHHH
T ss_pred             cCchHHHHHHHHHHCCCCEEEEeCCcHH---HHHHHHHH-----cCcHh-----heeeEee--cccccCCCCChHHHHHH
Confidence            4578999999999999999999998643   34556655     33321     0111111  11222234  4444433


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  510 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  510 (567)
                       ++.+    .-...- ...||++.+|+.+=+++|+   ++..++..
T Consensus       155 -~~~~----~~~~~~-~~~iGD~~~Di~~a~~aG~---~~~~~~~~  191 (214)
T 3e58_A          155 -LKQL----NVQASR-ALIIEDSEKGIAAGVAADV---EVWAIRDN  191 (214)
T ss_dssp             -HHHH----TCCGGG-EEEEECSHHHHHHHHHTTC---EEEEECCS
T ss_pred             -HHHc----CCChHH-eEEEeccHhhHHHHHHCCC---EEEEECCC
Confidence             2222    111122 4589999999999999999   45566653

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=97.73  E-value=4.5e-05  Score=72.28  Aligned_cols=132  Identities=13%  Similarity=0.028  Sum_probs=76.5

Q ss_pred             CCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCccc------------chHHHHHHH
Q psy12533         81 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG------------QSRVTREYL  148 (567)
Q Consensus        81 ~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~------------~a~~Tr~~L  148 (567)
                      ..-|++++|+||||+....   +..........+|+.++.+.++++||++..+|+++..            ....++..|
T Consensus        29 ~~~k~i~~D~DGtl~~~~~---y~~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l  105 (218)
T 2o2x_A           29 PHLPALFLDRDGTINVDTD---YPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL  105 (218)
T ss_dssp             SSCCCEEECSBTTTBCCCS---CTTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEeCCCCcCCCCc---ccCCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHH
Confidence            3457899999999997631   2222222245789999999999999999999998751            013455666


Q ss_pred             HhcccCCccCCCCceecCCCc---hhhhhhhhhhccCh--hHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcC
Q psy12533        149 QSVKQEDLTLPEGPMLLNPTS---LLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVG  223 (567)
Q Consensus       149 ~~~~q~~~~LP~GPlllsp~~---l~~al~REvi~k~p--~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vG  223 (567)
                      +.     .+++--.++.++..   -+.....++...+|  +.|+..+ +.+ .+ .+ ..  ...+|++.+|+.+=+++|
T Consensus       106 ~~-----~gl~~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~-~~~-~i-~~-~~--~~~VGD~~~Di~~a~~aG  174 (218)
T 2o2x_A          106 RE-----EGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAG-KRL-AL-DL-QR--SLIVGDKLADMQAGKRAG  174 (218)
T ss_dssp             HH-----TTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHH-HHH-TC-CG-GG--CEEEESSHHHHHHHHHTT
T ss_pred             HH-----cCCceeeEEEeecCCCCceeecccCCccCCCCHHHHHHHH-HHc-CC-CH-HH--EEEEeCCHHHHHHHHHCC
Confidence            65     34432222222210   00000012223344  4454432 222 11 11 12  356888899999999999


Q ss_pred             CCC
Q psy12533        224 IPL  226 (567)
Q Consensus       224 Ip~  226 (567)
                      +..
T Consensus       175 ~~~  177 (218)
T 2o2x_A          175 LAQ  177 (218)
T ss_dssp             CSE
T ss_pred             CCE
Confidence            873

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=97.71  E-value=0.00012  Score=69.49  Aligned_cols=102  Identities=13%  Similarity=0.068  Sum_probs=58.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.+++..++++||++..+|+.+....   +..|..+.-.++. .+ -++ +.+..      ....++|+.|+..  
T Consensus       112 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~---~~~l~~~~~~~~~-~~-~~~-~~~~~------~~~kp~~~~~~~~--  177 (277)
T 3iru_A          112 LIPGWKEVFDKLIAQGIKVGGNTGYGPGMM---APALIAAKEQGYT-PA-STV-FATDV------VRGRPFPDMALKV--  177 (277)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHHHHHTTCC-CS-EEE-CGGGS------SSCTTSSHHHHHH--
T ss_pred             cCcCHHHHHHHHHHcCCeEEEEeCCchHHH---HHHHHhcCcccCC-Cc-eEe-cHHhc------CCCCCCHHHHHHH--
Confidence            467889999999999999999999875443   4444442211111 11 111 11111      0112334555433  


Q ss_pred             HHHHhhCCCCC-CCEEEecCCCcccHHhHHHcCCCCCCEEEEcC
Q psy12533        467 RDIMALFPPNT-QPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS  509 (567)
Q Consensus       467 ~~i~~lf~~~~-~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~  509 (567)
                         ...++-.. .- ...||++.+|+.+=+++|+   +...|..
T Consensus       178 ---~~~lgi~~~~~-~i~vGD~~~Di~~a~~aG~---~~v~v~~  214 (277)
T 3iru_A          178 ---ALELEVGHVNG-CIKVDDTLPGIEEGLRAGM---WTVGVSC  214 (277)
T ss_dssp             ---HHHHTCSCGGG-EEEEESSHHHHHHHHHTTC---EEEEECS
T ss_pred             ---HHHcCCCCCcc-EEEEcCCHHHHHHHHHCCC---eEEEEec
Confidence               22222222 22 4589999999999999998   3445554

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=97.71  E-value=7.4e-05  Score=69.02  Aligned_cols=95  Identities=14%  Similarity=0.161  Sum_probs=58.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.+++..++++||++..+|+.+.   ...+..|+.     .++..-     .+..+.  ..++...+|   |.+.+
T Consensus        92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~-----~~l~~~-----f~~~~~--~~~~~~~kp---~~~~~  153 (233)
T 3s6j_A           92 ALPGAVELLETLDKENLKWCIATSGGI---DTATINLKA-----LKLDIN-----KINIVT--RDDVSYGKP---DPDLF  153 (233)
T ss_dssp             ECTTHHHHHHHHHHTTCCEEEECSSCH---HHHHHHHHT-----TTCCTT-----SSCEEC--GGGSSCCTT---STHHH
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCch---hhHHHHHHh-----cchhhh-----hheeec--cccCCCCCC---ChHHH
Confidence            467899999999999999999999754   334666665     344320     111211  112222344   22333


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +.+...+.-.... ...||+..+|+.+-+++|+.
T Consensus       154 ~~~~~~l~~~~~~-~i~iGD~~~Di~~a~~aG~~  186 (233)
T 3s6j_A          154 LAAAKKIGAPIDE-CLVIGDAIWDMLAARRCKAT  186 (233)
T ss_dssp             HHHHHHTTCCGGG-EEEEESSHHHHHHHHHTTCE
T ss_pred             HHHHHHhCCCHHH-EEEEeCCHHhHHHHHHCCCE
Confidence            3444433322223 46899999999999999994

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=97.71  E-value=1.3e-05  Score=72.37  Aligned_cols=120  Identities=10%  Similarity=0.116  Sum_probs=71.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~-GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      ..+|+.++.+.++++||++..+|+.+....... +   .     .++.. ...+...+..+..     ....|.. |...
T Consensus        80 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~---~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~-k~~~  144 (201)
T 4ap9_A           80 VSPEARELVETLREKGFKVVLISGSFEEVLEPF-K---E-----LGDEFMANRAIFEDGKFQG-----IRLRFRD-KGEF  144 (201)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-T---T-----TSSEEEEEEEEEETTEEEE-----EECCSSC-HHHH
T ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-H---H-----cCchhheeeEEeeCCceEC-----CcCCccC-HHHH
Confidence            568999999999999999999998765544322 2   1     22221 1111111111111     1122222 7776


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhhHHhhhhhcC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMF  536 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~F  536 (567)
                      ++.+    ++ ..  ...||+..+|+.+-+++|++   | .++....    .......+...|.++++.+.
T Consensus       145 l~~l----~~-~~--~i~iGD~~~Di~~~~~ag~~---v-~~~~~~~----~ad~v~~~~~el~~~l~~l~  200 (201)
T 4ap9_A          145 LKRF----RD-GF--ILAMGDGYADAKMFERADMG---I-AVGREIP----GADLLVKDLKELVDFIKNLK  200 (201)
T ss_dssp             HGGG----TT-SC--EEEEECTTCCHHHHHHCSEE---E-EESSCCT----TCSEEESSHHHHHHHHHTCC
T ss_pred             HHhc----Cc-Cc--EEEEeCCHHHHHHHHhCCce---E-EECCCCc----cccEEEccHHHHHHHHHHhh
Confidence            6666    22 22  45889999999999999994   3 5565544    23334567777777776653

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=97.69  E-value=5.4e-05  Score=70.94  Aligned_cols=111  Identities=20%  Similarity=0.256  Sum_probs=69.4

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcC----CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKD----WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  432 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkD----w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~  432 (567)
                      .-|+||||+||||+.+...   +...++-    ..+.|+  +...++++||++.-+|+++...+   +..++.     .+
T Consensus        18 ~ik~vifD~DGTL~d~~~~---~~~~~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~---~~~~~~-----lg   84 (189)
T 3mn1_A           18 AIKLAVFDVDGVLTDGRLY---FMEDGSEIKTFNTLDGQ--GIKMLIASGVTTAIISGRKTAIV---ERRAKS-----LG   84 (189)
T ss_dssp             TCCEEEECSTTTTSCSEEE---EETTSCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHH---HHHHHH-----HT
T ss_pred             hCCEEEEcCCCCcCCccEe---eccCCcEeeeeccccHH--HHHHHHHCCCEEEEEECcChHHH---HHHHHH-----cC
Confidence            3478999999999988431   1111211    122333  88899999999999999986554   455555     33


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        433 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       433 lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +.         ..|..     +..+|     +.++.+...++-.... ...+|+..+|+.+-+++|++
T Consensus        85 l~---------~~f~~-----~~~K~-----~~~~~~~~~~g~~~~~-~~~vGD~~nDi~~~~~ag~~  132 (189)
T 3mn1_A           85 IE---------HLFQG-----REDKL-----VVLDKLLAELQLGYEQ-VAYLGDDLPDLPVIRRVGLG  132 (189)
T ss_dssp             CS---------EEECS-----CSCHH-----HHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             CH---------HHhcC-----cCChH-----HHHHHHHHHcCCChhH-EEEECCCHHHHHHHHHCCCe
Confidence            32         11211     13334     4444444433322222 46799999999999999985

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=97.69  E-value=0.00014  Score=62.29  Aligned_cols=110  Identities=18%  Similarity=0.206  Sum_probs=67.2

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      |+|++|+||||+.+            ....+|+.++.+.++++||++..+|+++.....   ..|+.     .++..  .
T Consensus         3 k~i~~D~DgtL~~~------------~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~---~~l~~-----~~l~~--~   60 (137)
T 2pr7_A            3 RGLIVDYAGVLDGT------------DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGA---APIRE-----LETNG--V   60 (137)
T ss_dssp             CEEEECSTTTTSSC------------HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGG---HHHHH-----HHHTT--S
T ss_pred             cEEEEeccceecCC------------CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHH---HHHHH-----CChHh--h
Confidence            78999999999432            224679999999999999999999999776543   33433     12210  0


Q ss_pred             ecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533        164 LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  224 (567)
Q Consensus       164 llsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  224 (567)
                         -+..+.+  .++...+|+.   +.++.+...+.-...- ..-+|++.+|+.+-+++|+
T Consensus        61 ---f~~i~~~--~~~~~~Kp~~---~~~~~~~~~~~~~~~~-~~~vgD~~~di~~a~~~G~  112 (137)
T 2pr7_A           61 ---VDKVLLS--GELGVEKPEE---AAFQAAADAIDLPMRD-CVLVDDSILNVRGAVEAGL  112 (137)
T ss_dssp             ---SSEEEEH--HHHSCCTTSH---HHHHHHHHHTTCCGGG-EEEEESCHHHHHHHHHHTC
T ss_pred             ---ccEEEEe--ccCCCCCCCH---HHHHHHHHHcCCCccc-EEEEcCCHHHHHHHHHCCC
Confidence               1122211  2333445532   1222222222211112 4467889999999999998

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=97.69  E-value=8.5e-05  Score=68.45  Aligned_cols=127  Identities=13%  Similarity=0.142  Sum_probs=76.8

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKI  188 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~---GPlllsp~~l~~al~REvi~k~p~~fKi  188 (567)
                      ..+|+.++.+.++++ |++..+|+.+.   ..++..++.     .++..   ..+..+.+....   . ....+| ..|.
T Consensus        70 ~~~g~~~~l~~l~~~-~~~~i~s~~~~---~~~~~~l~~-----~gl~~~f~~~~~~~~~~~~~---~-~~~p~p-~~~~  135 (206)
T 1rku_A           70 PLEGAVEFVDWLRER-FQVVILSDTFY---EFSQPLMRQ-----LGFPTLLCHKLEIDDSDRVV---G-YQLRQK-DPKR  135 (206)
T ss_dssp             CCTTHHHHHHHHHTT-SEEEEEEEEEH---HHHHHHHHH-----TTCCCEEEEEEEECTTSCEE---E-EECCSS-SHHH
T ss_pred             CCccHHHHHHHHHhc-CcEEEEECChH---HHHHHHHHH-----cCCcceecceeEEcCCceEE---e-eecCCC-chHH
Confidence            357999999999999 99999999653   455667766     44542   112222221110   0 001455 4677


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccc-cccHHhHHhhhhhcC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTF-QSTYSNMSYLVDQMF  261 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~-~~sY~~l~~~vd~~f  261 (567)
                      .+++.+... |.    =...+|++.+|+.+-+++|+.    +++++..++........ ..+...|.+++..++
T Consensus       136 ~~l~~l~~~-~~----~~~~iGD~~~Di~~a~~aG~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  200 (206)
T 1rku_A          136 QSVIAFKSL-YY----RVIAAGDSYNDTTMLSEAHAG----ILFHAPENVIREFPQFPAVHTYEDLKREFLKAS  200 (206)
T ss_dssp             HHHHHHHHT-TC----EEEEEECSSTTHHHHHHSSEE----EEESCCHHHHHHCTTSCEECSHHHHHHHHHHHC
T ss_pred             HHHHHHHhc-CC----EEEEEeCChhhHHHHHhcCcc----EEECCcHHHHHHHhhhccccchHHHHHHHHHHh
Confidence            777776542 21    256889999999999999995    33566544432211111 456666666665553

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.68  E-value=9.7e-05  Score=69.06  Aligned_cols=110  Identities=18%  Similarity=0.304  Sum_probs=70.5

Q ss_pred             CCcEEEEecCCccccCCcccccccccccc---c-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKD---W-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkD---w-th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      .-|+||+|||||+|.+..   +++.-|+-   | .+.+.  ..+.++++|+++.-+|++  .   .++..++.+   ..+
T Consensus         8 ~ikliv~D~DGtL~d~~~---~~~~~g~~~~~f~~~D~~--~L~~Lk~~Gi~~~I~Tg~--~---~~~~~l~~l---~lg   74 (168)
T 3ewi_A            8 EIKLLVCNIDGCLTNGHI---YVSGDQKEIISYDVKDAI--GISLLKKSGIEVRLISER--A---CSKQTLSAL---KLD   74 (168)
T ss_dssp             CCCEEEEECCCCCSCSCC---BCCSSCCCEEEEEHHHHH--HHHHHHHTTCEEEEECSS--C---CCHHHHHTT---CCC
T ss_pred             cCcEEEEeCccceECCcE---EEcCCCCEEEEEecCcHH--HHHHHHHCCCEEEEEeCc--H---HHHHHHHHh---CCC
Confidence            457899999999998753   12222221   1 22333  478899999999999999  2   345556531   123


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        158 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       158 LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      ++   ++...              ++   |.+.++.+...+.-...- .+.||+..+|+.+-+.+|++
T Consensus        75 i~---~~~g~--------------~~---K~~~l~~~~~~~gi~~~~-~~~vGD~~nDi~~~~~ag~~  121 (168)
T 3ewi_A           75 CK---TEVSV--------------SD---KLATVDEWRKEMGLCWKE-VAYLGNEVSDEECLKRVGLS  121 (168)
T ss_dssp             CC---EECSC--------------SC---HHHHHHHHHHHTTCCGGG-EEEECCSGGGHHHHHHSSEE
T ss_pred             cE---EEECC--------------CC---hHHHHHHHHHHcCcChHH-EEEEeCCHhHHHHHHHCCCE
Confidence            32   22110              11   667777777665422223 67899999999999999976

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=97.67  E-value=4.4e-05  Score=71.53  Aligned_cols=110  Identities=20%  Similarity=0.253  Sum_probs=69.2

Q ss_pred             CcEEEEecCCccccCCccccccccccc----cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGK----DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  158 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGk----Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L  158 (567)
                      -|+||||+||||+.+...   +...+.    -..+.|+  +...++++||++.-+|+++...+   +..++.     .++
T Consensus        19 ik~vifD~DGTL~d~~~~---~~~~~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~---~~~~~~-----lgl   85 (189)
T 3mn1_A           19 IKLAVFDVDGVLTDGRLY---FMEDGSEIKTFNTLDGQ--GIKMLIASGVTTAIISGRKTAIV---ERRAKS-----LGI   85 (189)
T ss_dssp             CCEEEECSTTTTSCSEEE---EETTSCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHH---HHHHHH-----HTC
T ss_pred             CCEEEEcCCCCcCCccEe---eccCCcEeeeeccccHH--HHHHHHHCCCEEEEEECcChHHH---HHHHHH-----cCC
Confidence            478999999999988531   111111    1222233  88899999999999999876554   445555     333


Q ss_pred             CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .         ..|..     +..     |-+.++.+...+.-...- ++.+|+..+|+.+-+++|++
T Consensus        86 ~---------~~f~~-----~~~-----K~~~~~~~~~~~g~~~~~-~~~vGD~~nDi~~~~~ag~~  132 (189)
T 3mn1_A           86 E---------HLFQG-----RED-----KLVVLDKLLAELQLGYEQ-VAYLGDDLPDLPVIRRVGLG  132 (189)
T ss_dssp             S---------EEECS-----CSC-----HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             H---------HHhcC-----cCC-----hHHHHHHHHHHcCCChhH-EEEECCCHHHHHHHHHCCCe
Confidence            2         12211     122     445555555544321222 56789999999999999985

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=97.67  E-value=3.3e-05  Score=73.55  Aligned_cols=111  Identities=14%  Similarity=0.256  Sum_probs=70.3

Q ss_pred             CCeEEEEecCCccccCCcccccccccCc---CC-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGK---DW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  432 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~Gk---Dw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~  432 (567)
                      .-|+||||+||||+.+...   +...+.   .| .+.|.  ....++++||++.-+|+++...+   +..++.     .+
T Consensus        24 ~ik~vifD~DGtL~d~~~~---~~~~~~~~~~~~~~d~~--~l~~L~~~G~~~~ivT~~~~~~~---~~~l~~-----lg   90 (195)
T 3n07_A           24 QIKLLICDVDGVFSDGLIY---MGNQGEELKTFHTRDGY--GVKALMNAGIEIAIITGRRSQIV---ENRMKA-----LG   90 (195)
T ss_dssp             TCCEEEECSTTTTSCSCCE---ECTTSCEECCCCTTHHH--HHHHHHHTTCEEEEECSSCCHHH---HHHHHH-----TT
T ss_pred             CCCEEEEcCCCCcCCCcEE---EccCchhhheeecccHH--HHHHHHHCCCEEEEEECcCHHHH---HHHHHH-----cC
Confidence            3578999999999986431   111122   12 33333  48889999999999999975544   666666     44


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        433 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       433 lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      ++.         .|..     +  +|   |...++.++..+.-.... .+.+|+..+|+.+-+++|+.
T Consensus        91 i~~---------~~~~-----~--k~---k~~~~~~~~~~~~~~~~~-~~~vGD~~nDi~~~~~ag~~  138 (195)
T 3n07_A           91 ISL---------IYQG-----Q--DD---KVQAYYDICQKLAIAPEQ-TGYIGDDLIDWPVMEKVALR  138 (195)
T ss_dssp             CCE---------EECS-----C--SS---HHHHHHHHHHHHCCCGGG-EEEEESSGGGHHHHTTSSEE
T ss_pred             CcE---------EeeC-----C--CC---cHHHHHHHHHHhCCCHHH-EEEEcCCHHHHHHHHHCCCE
Confidence            441         1211     1  23   445555555433322223 46899999999999999986

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=97.67  E-value=8.1e-05  Score=70.05  Aligned_cols=111  Identities=17%  Similarity=0.284  Sum_probs=69.4

Q ss_pred             CCeEEEEecCCccccCCcccccccccC---cCC-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMG---KDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  432 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~G---kDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~  432 (567)
                      .-|+|+||+||||+.+...   +...+   +.| ...|+  ..+.++++||++..+|+++...+   +..++.     .+
T Consensus        18 ~ik~vifD~DGtL~~~~~~---~~~~~~~~~~~~~~d~~--~l~~L~~~g~~~~ivTn~~~~~~---~~~l~~-----lg   84 (191)
T 3n1u_A           18 KIKCLICDVDGVLSDGLLH---IDNHGNELKSFHVQDGM--GLKLLMAAGIQVAIITTAQNAVV---DHRMEQ-----LG   84 (191)
T ss_dssp             TCSEEEECSTTTTBCSCCE---ECTTCCEECCBCHHHHH--HHHHHHHTTCEEEEECSCCSHHH---HHHHHH-----HT
T ss_pred             cCCEEEEeCCCCCCCCcee---ecCCchhhhhccccChH--HHHHHHHCCCeEEEEeCcChHHH---HHHHHH-----cC
Confidence            4578999999999986431   11111   223 33444  48889999999999999875444   566666     44


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        433 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       433 lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      ++.         .|..     +..+|+.++..+ +.+    .-.... ...+|++.+|+.+-+++|+.
T Consensus        85 l~~---------~~~~-----~kpk~~~~~~~~-~~~----~~~~~~-~~~vGD~~~Di~~~~~ag~~  132 (191)
T 3n1u_A           85 ITH---------YYKG-----QVDKRSAYQHLK-KTL----GLNDDE-FAYIGDDLPDLPLIQQVGLG  132 (191)
T ss_dssp             CCE---------EECS-----CSSCHHHHHHHH-HHH----TCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             Ccc---------ceeC-----CCChHHHHHHHH-HHh----CCCHHH-EEEECCCHHHHHHHHHCCCE
Confidence            542         1211     134454444332 222    211222 46899999999999999987

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=97.67  E-value=2.7e-05  Score=72.99  Aligned_cols=109  Identities=15%  Similarity=0.080  Sum_probs=67.1

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC----CCchhhhhhhhhhccCh-hHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN----PTSLLNAFHTEVIEKKP-QEFK  187 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPllls----p~~l~~al~REvi~k~p-~~fK  187 (567)
                      .+|+.++...++++|+++.-+|+.+..   .++.+++.     .+++  .++.+    .++.+.   .+...... ..-|
T Consensus        94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~---~~~~~~~~-----~g~~--~~~~~~~~~~~~~~~---g~~~~~~~~~~~K  160 (232)
T 3fvv_A           94 TVQAVDVVRGHLAAGDLCALVTATNSF---VTAPIARA-----FGVQ--HLIATDPEYRDGRYT---GRIEGTPSFREGK  160 (232)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHH-----TTCC--EEEECEEEEETTEEE---EEEESSCSSTHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHH-----cCCC--EEEEcceEEECCEEe---eeecCCCCcchHH
Confidence            679999999999999999999997644   44666666     3443  11111    011100   00000000 1236


Q ss_pred             HHHHHHHHHhCC---CCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCcee
Q psy12533        188 ISCLRDIMALFP---PNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK  239 (567)
Q Consensus       188 i~~L~~i~~lf~---~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~  239 (567)
                      .+.++.+....+   -... =...+|+..+|+.+-+.+|++    +.+||+.++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~-~~~~vGDs~~D~~~~~~ag~~----~~~~~~~~l~  210 (232)
T 3fvv_A          161 VVRVNQWLAGMGLALGDFA-ESYFYSDSVNDVPLLEAVTRP----IAANPSPGLR  210 (232)
T ss_dssp             HHHHHHHHHHTTCCGGGSS-EEEEEECCGGGHHHHHHSSEE----EEESCCHHHH
T ss_pred             HHHHHHHHHHcCCCcCchh-heEEEeCCHhhHHHHHhCCCe----EEECcCHHHH
Confidence            777777665533   1112 266899999999999999976    4778876553

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=97.66  E-value=9.4e-05  Score=68.95  Aligned_cols=100  Identities=19%  Similarity=0.175  Sum_probs=59.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++++.++++||++..+|+.+..   .++.+|+.     .++..    . -+..+.+  .++...+|  +.|+..
T Consensus        96 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~-----~~l~~----~-f~~~~~~--~~~~~~Kp~~~~~~~~  160 (232)
T 1zrn_A           96 PFSEVPDSLRELKRRGLKLAILSNGSPQ---SIDAVVSH-----AGLRD----G-FDHLLSV--DPVQVYKPDNRVYELA  160 (232)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHH-----TTCGG----G-CSEEEES--GGGTCCTTSHHHHHHH
T ss_pred             CCccHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHh-----cChHh----h-hheEEEe--cccCCCCCCHHHHHHH
Confidence            3489999999999999999999998643   34566665     33321    0 1111111  12223344  455443


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  510 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  510 (567)
                       ++.+. + .+ ..  ...+|+..+|+.+-+++|+.   +..++..
T Consensus       161 -~~~~~-~-~~-~~--~~~iGD~~~Di~~a~~aG~~---~~~~~~~  197 (232)
T 1zrn_A          161 -EQALG-L-DR-SA--ILFVASNAWDATGARYFGFP---TCWINRT  197 (232)
T ss_dssp             -HHHHT-S-CG-GG--EEEEESCHHHHHHHHHHTCC---EEEECTT
T ss_pred             -HHHcC-C-Cc-cc--EEEEeCCHHHHHHHHHcCCE---EEEEcCC
Confidence             33321 1 11 22  34678899999999999996   3445553

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=97.65  E-value=0.00017  Score=69.96  Aligned_cols=132  Identities=13%  Similarity=0.139  Sum_probs=70.0

Q ss_pred             cchhHHHHHHHHHHCCc--eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGY--KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY--~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~  464 (567)
                      ..+|+.+++..++++||  ++..+|+.+....   +..++.+.=  ..+-++ ++++.+.     ..++...+|   |.+
T Consensus       143 ~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~---~~~l~~~gl--~~~fd~-v~~~~~~-----~~~~~~~Kp---~~~  208 (282)
T 3nuq_A          143 PDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHA---IRCLRLLGI--ADLFDG-LTYCDYS-----RTDTLVCKP---HVK  208 (282)
T ss_dssp             CCHHHHHHHHHHHHSSSCSEEEEECSSCHHHH---HHHHHHHTC--TTSCSE-EECCCCS-----SCSSCCCTT---SHH
T ss_pred             cChhHHHHHHHHHhCCCCceEEEEECCChHHH---HHHHHhCCc--ccccce-EEEeccC-----CCcccCCCc---CHH
Confidence            47899999999999999  9999998765443   444444110  111121 2222111     011122344   222


Q ss_pred             HHHHHHhhCCCCC-CCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccc-----ccccccccHhhHHhhhhhcC
Q psy12533        465 CLRDIMALFPPNT-QPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE-----MTQTFQSTYSNMSYLVDQMF  536 (567)
Q Consensus       465 ~L~~i~~lf~~~~-~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~-----~~~~~~~sY~~l~~~vd~~F  536 (567)
                      +++.+...++-.. .- ...+|++.+|+.+=+++|+.   +.+.+..+.....     .......+...|.+++..+|
T Consensus       209 ~~~~~~~~lgi~~~~~-~i~vGD~~~Di~~a~~aG~~---~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~lf  282 (282)
T 3nuq_A          209 AFEKAMKESGLARYEN-AYFIDDSGKNIETGIKLGMK---TCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF  282 (282)
T ss_dssp             HHHHHHHHHTCCCGGG-EEEEESCHHHHHHHHHHTCS---EEEEECSCCC----CCCCTTCEEESSGGGGGGTSGGGC
T ss_pred             HHHHHHHHcCCCCccc-EEEEcCCHHHHHHHHHCCCe---EEEEEcCCccccccccCCCCCEEeCCHHHHHHHhhhhC
Confidence            3333333232222 22 45899999999999999993   2333333333221     11123455666666665554

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=97.65  E-value=5e-05  Score=70.52  Aligned_cols=124  Identities=14%  Similarity=0.043  Sum_probs=68.3

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      .+|+.++.+.++++||++..+|+.+..   ..+..|+.     .++..-     .+..+.+  -++...+|+.   +.+.
T Consensus       101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~-----~~l~~~-----f~~~~~~--~~~~~~kp~~---~~~~  162 (233)
T 3umb_A          101 FPENVPVLRQLREMGLPLGILSNGNPQ---MLEIAVKS-----AGMSGL-----FDHVLSV--DAVRLYKTAP---AAYA  162 (233)
T ss_dssp             CTTHHHHHHHHHTTTCCEEEEESSCHH---HHHHHHHT-----TTCTTT-----CSEEEEG--GGTTCCTTSH---HHHT
T ss_pred             CCCHHHHHHHHHhCCCcEEEEeCCCHH---HHHHHHHH-----CCcHhh-----cCEEEEe--cccCCCCcCH---HHHH
Confidence            579999999999999999999997643   34555555     333210     0111111  1233344532   2222


Q ss_pred             HHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecccc---ccccccHHhHHhhhh
Q psy12533        193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMT---QTFQSTYSNMSYLVD  258 (567)
Q Consensus       193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~---~~~~~sY~~l~~~vd  258 (567)
                      .+...+.-...- ...+|++.+|+.+=+++|+.   +..|+..+....+..   .....+...|.+++.
T Consensus       163 ~~~~~~~~~~~~-~~~vGD~~~Di~~a~~~G~~---~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l~  227 (233)
T 3umb_A          163 LAPRAFGVPAAQ-ILFVSSNGWDACGATWHGFT---TFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQ  227 (233)
T ss_dssp             HHHHHHTSCGGG-EEEEESCHHHHHHHHHHTCE---EEEECTTCCCCCSSSCCCSEEESSHHHHHHHHH
T ss_pred             HHHHHhCCCccc-EEEEeCCHHHHHHHHHcCCE---EEEEcCCCCCchhccCCCCEEECCHHHHHHHHH
Confidence            222222211122 45678889999999999986   445555444333321   123455666655543

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=97.63  E-value=0.00013  Score=69.49  Aligned_cols=113  Identities=13%  Similarity=0.184  Sum_probs=70.1

Q ss_pred             CcEEEEecCCccccCCccc-cccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533         83 DKIVISDIDGTITKSDVLG-HVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  161 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG-~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G  161 (567)
                      -|+||||+||||+.+...- ..-+.+..-..+.|.  ....++++|+++.-+|+++...   ++..++.     .+++  
T Consensus        25 ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~--~l~~L~~~G~~~~ivT~~~~~~---~~~~l~~-----lgi~--   92 (195)
T 3n07_A           25 IKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGY--GVKALMNAGIEIAIITGRRSQI---VENRMKA-----LGIS--   92 (195)
T ss_dssp             CCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHH--HHHHHHHTTCEEEEECSSCCHH---HHHHHHH-----TTCC--
T ss_pred             CCEEEEcCCCCcCCCcEEEccCchhhheeecccHH--HHHHHHHCCCEEEEEECcCHHH---HHHHHHH-----cCCc--
Confidence            4789999999999864311 000111111123333  4788999999999999987544   4666666     4443  


Q ss_pred             ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        162 PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       162 Plllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                             ..|..     +  +|   |-+.++.++..+.-...- .+.+|+..+|+.+-+++|++
T Consensus        93 -------~~~~~-----~--k~---k~~~~~~~~~~~~~~~~~-~~~vGD~~nDi~~~~~ag~~  138 (195)
T 3n07_A           93 -------LIYQG-----Q--DD---KVQAYYDICQKLAIAPEQ-TGYIGDDLIDWPVMEKVALR  138 (195)
T ss_dssp             -------EEECS-----C--SS---HHHHHHHHHHHHCCCGGG-EEEEESSGGGHHHHTTSSEE
T ss_pred             -------EEeeC-----C--CC---cHHHHHHHHHHhCCCHHH-EEEEcCCHHHHHHHHHCCCE
Confidence                   11211     1  23   556666665544322222 56899999999999999976

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=97.62  E-value=0.0001  Score=68.69  Aligned_cols=125  Identities=14%  Similarity=0.125  Sum_probs=69.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~  464 (567)
                      ..+|+.+++..++++||++..+|+.+...   ++..|+.     .++..  --++ +.+...      ....+|+.|+..
T Consensus       105 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~-----~~l~~~f~~~~-~~~~~~------~~kp~~~~~~~~  169 (237)
T 4ex6_A          105 LYPGVLEGLDRLSAAGFRLAMATSKVEKA---ARAIAEL-----TGLDTRLTVIA-GDDSVE------RGKPHPDMALHV  169 (237)
T ss_dssp             BCTTHHHHHHHHHHTTEEEEEECSSCHHH---HHHHHHH-----HTGGGTCSEEE-CTTTSS------SCTTSSHHHHHH
T ss_pred             cCCCHHHHHHHHHhCCCcEEEEcCCChHH---HHHHHHH-----cCchhheeeEE-eCCCCC------CCCCCHHHHHHH
Confidence            56789999999999999999999976543   3455544     22211  1111 121110      112344555543


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCC-C---cccccccccccccHhhHHhhhhhc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR-G---EVKHEMTQTFQSTYSNMSYLVDQM  535 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~-g---~~~~~~~~~~~~sY~~l~~~vd~~  535 (567)
                      + +.+    .-.... ...||+..+|+.+-+++|++.   ..|... +   ++..........+...|.+++..-
T Consensus       170 ~-~~l----g~~~~~-~i~vGD~~~Di~~a~~aG~~~---i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~~  235 (237)
T 4ex6_A          170 A-RGL----GIPPER-CVVIGDGVPDAEMGRAAGMTV---IGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLDG  235 (237)
T ss_dssp             H-HHH----TCCGGG-EEEEESSHHHHHHHHHTTCEE---EEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHHC
T ss_pred             H-HHc----CCCHHH-eEEEcCCHHHHHHHHHCCCeE---EEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHcc
Confidence            3 222    211222 468999999999999999962   334332 1   121112223356666666665543

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.61  E-value=8.4e-05  Score=73.15  Aligned_cols=72  Identities=15%  Similarity=0.242  Sum_probs=51.0

Q ss_pred             EecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         78 KWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        78 lw~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      .|...-|+|+||+||||..++.           ...+...+..++++++|++|+.+|+|+....   +.++..     .+
T Consensus        16 ~~~~~~kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~---~~~~~~-----l~   76 (285)
T 3pgv_A           16 YFQGMYQVVASDLDGTLLSPDH-----------FLTPYAKETLKLLTARGINFVFATGRHYIDV---GQIRDN-----LG   76 (285)
T ss_dssp             -----CCEEEEECCCCCSCTTS-----------CCCHHHHHHHHHHHTTTCEEEEECSSCGGGG---HHHHHH-----HC
T ss_pred             cccCcceEEEEeCcCCCCCCCC-----------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHh-----cC
Confidence            3777789999999999998752           1234577888999999999999999998876   455655     45


Q ss_pred             CCCCceecCCCc
Q psy12533        158 LPEGPMLLNPTS  169 (567)
Q Consensus       158 LP~GPlllsp~~  169 (567)
                      +| +|+++....
T Consensus        77 ~~-~~~I~~nGa   87 (285)
T 3pgv_A           77 IR-SYMITSNGA   87 (285)
T ss_dssp             SC-CEEEEGGGT
T ss_pred             CC-ccEEEcCCe
Confidence            55 666655443

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=97.57  E-value=8.7e-05  Score=67.50  Aligned_cols=99  Identities=16%  Similarity=0.301  Sum_probs=59.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce-----ecCCCchhhhhhhhhhccChh-H
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM-----LLNPTSLLNAFHTEVIEKKPQ-E  460 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv-----l~spd~l~~al~rEvi~k~p~-~  460 (567)
                      ..+|+.++++.++++||++.-+|+.+..   .++..++.     .+++.-.+     ..+.++.+.    ++..++|. .
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  150 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLSE---SIQPFADY-----LNIPRENIFAVETIWNSDGSFK----ELDNSNGACD  150 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHH-----HTCCGGGEEEEEEEECTTSBEE----EEECTTSTTT
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcHH---HHHHHHHH-----cCCCcccEEEeeeeecCCCcee----ccCCCCCCcc
Confidence            5678999999999999999999986543   34556655     44543222     222222211    12223332 2


Q ss_pred             HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCC
Q psy12533        461 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLS  502 (567)
Q Consensus       461 fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~  502 (567)
                      -|...|.+...+   .... ...||+..+|+.+- ++|+..-
T Consensus       151 ~~~~~l~~~~~~---~~~~-~~~vGD~~~Di~~~-~~G~~~~  187 (219)
T 3kd3_A          151 SKLSAFDKAKGL---IDGE-VIAIGDGYTDYQLY-EKGYATK  187 (219)
T ss_dssp             CHHHHHHHHGGG---CCSE-EEEEESSHHHHHHH-HHTSCSE
T ss_pred             cHHHHHHHHhCC---CCCC-EEEEECCHhHHHHH-hCCCCcE
Confidence            244445444332   1222 56899999999995 6787653

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=97.56  E-value=0.00013  Score=68.03  Aligned_cols=114  Identities=13%  Similarity=0.176  Sum_probs=68.5

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCc--chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWA--QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  434 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~--h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP  434 (567)
                      .-|+|+||+||||+.+..   ++..-|....  +..-..+.+.++++|+++..+|+++...   ++.+++.     .+++
T Consensus        25 ~ik~vifD~DGTL~~~~~---~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~~---~~~~l~~-----lgl~   93 (188)
T 2r8e_A           25 NIRLLILDVDGVLSDGLI---YMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKL---VEDRCAT-----LGIT   93 (188)
T ss_dssp             TCSEEEECCCCCCBCSEE---EEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCHH---HHHHHHH-----HTCC
T ss_pred             cCCEEEEeCCCCcCCCCE---EecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChHH---HHHHHHH-----cCCc
Confidence            458899999999998542   1211122111  1111237888999999999999998654   4566665     4443


Q ss_pred             CCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        435 EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       435 ~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      .  ++       ..     ...+|+.++.     +...++-.... ...+|++.+|+.+-+++|+..
T Consensus        94 ~--~~-------~~-----~kpk~~~~~~-----~~~~~g~~~~~-~~~iGD~~~Di~~a~~ag~~~  140 (188)
T 2r8e_A           94 H--LY-------QG-----QSNKLIAFSD-----LLEKLAIAPEN-VAYVGDDLIDWPVMEKVGLSV  140 (188)
T ss_dssp             E--EE-------CS-----CSCSHHHHHH-----HHHHHTCCGGG-EEEEESSGGGHHHHTTSSEEE
T ss_pred             e--ee-------cC-----CCCCHHHHHH-----HHHHcCCCHHH-EEEECCCHHHHHHHHHCCCEE
Confidence            1  11       10     1334444443     32222211112 468899999999999999864

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=97.56  E-value=0.00015  Score=68.14  Aligned_cols=92  Identities=17%  Similarity=0.187  Sum_probs=55.8

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~~  465 (567)
                      .+|+.++++.++++||++..+|+++..   .++..|+.     .++..    . -+..+.+  .++...+|  +.|+.. 
T Consensus       107 ~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~-----~~l~~----~-f~~~~~~--~~~~~~Kp~~~~~~~~-  170 (240)
T 2no4_A          107 YPDAAETLEKLKSAGYIVAILSNGNDE---MLQAALKA-----SKLDR----V-LDSCLSA--DDLKIYKPDPRIYQFA-  170 (240)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHH-----TTCGG----G-CSEEEEG--GGTTCCTTSHHHHHHH-
T ss_pred             CCCHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHh-----cCcHH----H-cCEEEEc--cccCCCCCCHHHHHHH-
Confidence            389999999999999999999998643   34666665     33321    0 1122211  12223344  455433 


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      ++.+    +-.... ...+|+..+|+.+=+++|+.
T Consensus       171 ~~~~----~~~~~~-~~~iGD~~~Di~~a~~aG~~  200 (240)
T 2no4_A          171 CDRL----GVNPNE-VCFVSSNAWDLGGAGKFGFN  200 (240)
T ss_dssp             HHHH----TCCGGG-EEEEESCHHHHHHHHHHTCE
T ss_pred             HHHc----CCCccc-EEEEeCCHHHHHHHHHCCCE
Confidence            3322    111112 34678889999999999986

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=97.56  E-value=0.00022  Score=75.49  Aligned_cols=126  Identities=19%  Similarity=0.304  Sum_probs=78.9

Q ss_pred             CCCeEEEEecCCccccCCcccccccccCcCCc--chhHHHHHHHHHHCCceEEEEccCcc---------cchHHHHHHHH
Q psy12533        356 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWA--QNGVTRLFTKIKENGYKLLYLSARAI---------GQSRVTREYLQ  424 (567)
Q Consensus       356 ~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~--h~Gva~l~~~i~~nGY~iiYLSaRpi---------~qa~~Tr~~L~  424 (567)
                      ...|+|+||+||||..... |..+..-..+|.  .+|+.++.+.++++||++..+|+++.         .....++..|.
T Consensus        56 ~~~k~v~fD~DGTL~~~~~-~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~  134 (416)
T 3zvl_A           56 PQGKVAAFDLDGTLITTRS-GKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLE  134 (416)
T ss_dssp             CCSSEEEECSBTTTEECSS-CSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEeCCCCccccCC-CccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHH
Confidence            4578999999999986542 333445567774  69999999999999999999999761         11223555565


Q ss_pred             hcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHh--hCCCCCCCEEEecCCCc------------
Q psy12533        425 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMA--LFPPNTQPFYAGYGNKV------------  488 (567)
Q Consensus       425 ~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~~L~~i~~--lf~~~~~pf~agfGNr~------------  488 (567)
                      .     .+++---+++ .+        ++..++|  +.|..++ +.+..  -..+ ...  .-+|++.            
T Consensus       135 ~-----lgl~fd~i~~-~~--------~~~~~KP~p~~~~~a~-~~l~~~~~v~~-~~~--l~VGDs~gr~~~~~~~~~~  196 (416)
T 3zvl_A          135 K-----LGVPFQVLVA-TH--------AGLNRKPVSGMWDHLQ-EQANEGIPISV-EDS--VFVGDAAGRLANWAPGRKK  196 (416)
T ss_dssp             H-----HTSCCEEEEE-CS--------SSTTSTTSSHHHHHHH-HHSSTTCCCCG-GGC--EEECSCSCBCTTSSTTCCS
T ss_pred             H-----cCCCEEEEEE-CC--------CCCCCCCCHHHHHHHH-HHhCCCCCCCH-HHe--EEEECCCCCcccccccccc
Confidence            5     5554222333 22        2333444  5555433 22210  0111 233  3567775            


Q ss_pred             -----ccHHhHHHcCCC
Q psy12533        489 -----NDVWSYQAVGIP  500 (567)
Q Consensus       489 -----tDv~aY~~vGIp  500 (567)
                           +|+.+=+++||+
T Consensus       197 ~d~s~~Di~~A~~aGi~  213 (416)
T 3zvl_A          197 KDFSCADRLFALNVGLP  213 (416)
T ss_dssp             CCSCCHHHHHHHHHTCC
T ss_pred             cCCChhhHHHHHHcCCc
Confidence                 899999999997

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=97.56  E-value=0.00021  Score=66.62  Aligned_cols=99  Identities=19%  Similarity=0.185  Sum_probs=57.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChh--HHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQ--EFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~--~fKi~~  190 (567)
                      .+|+.++.+.++++||++..+|+++..   .++..|+.     .++..  .   -+..+.+  .++...+|+  .|+.. 
T Consensus        97 ~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~-----~~l~~--~---f~~~~~~--~~~~~~Kp~~~~~~~~-  160 (232)
T 1zrn_A           97 FSEVPDSLRELKRRGLKLAILSNGSPQ---SIDAVVSH-----AGLRD--G---FDHLLSV--DPVQVYKPDNRVYELA-  160 (232)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHH-----TTCGG--G---CSEEEES--GGGTCCTTSHHHHHHH-
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHh-----cChHh--h---hheEEEe--cccCCCCCCHHHHHHH-
Confidence            379999999999999999999997643   34566665     33321  0   0111111  122334443  34332 


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  235 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  235 (567)
                      ++.+ .+ ++  .- ...+|+..+|+.+=+++|+..   ..++..
T Consensus       161 ~~~~-~~-~~--~~-~~~iGD~~~Di~~a~~aG~~~---~~~~~~  197 (232)
T 1zrn_A          161 EQAL-GL-DR--SA-ILFVASNAWDATGARYFGFPT---CWINRT  197 (232)
T ss_dssp             HHHH-TS-CG--GG-EEEEESCHHHHHHHHHHTCCE---EEECTT
T ss_pred             HHHc-CC-Cc--cc-EEEEeCCHHHHHHHHHcCCEE---EEEcCC
Confidence            2222 11 11  12 345688899999999999963   344543

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=97.56  E-value=4.1e-05  Score=78.19  Aligned_cols=112  Identities=17%  Similarity=0.191  Sum_probs=64.8

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhh-hhhhhhhccChhHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLN-AFHTEVIEKKPQEFKI  463 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~-al~rEvi~k~p~~fK~  463 (567)
                      ..||+.++.+.++++||++.-+|+.+.   ..++..++.     .++..  +-++...++.+. -+..++...+|   |-
T Consensus       180 l~pg~~e~L~~Lk~~G~~v~IvSn~~~---~~~~~~l~~-----lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kp---kp  248 (317)
T 4eze_A          180 LSPGLLTILPVIKAKGFKTAIISGGLD---IFTQRLKAR-----YQLDYAFSNTVEIRDNVLTDNITLPIMNAAN---KK  248 (317)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHH-----HTCSEEEEECEEEETTEEEEEECSSCCCHHH---HH
T ss_pred             ECcCHHHHHHHHHhCCCEEEEEeCccH---HHHHHHHHH-----cCCCeEEEEEEEeeCCeeeeeEecccCCCCC---CH
Confidence            578999999999999999999999654   455666665     34421  000000011110 01111222233   44


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccc
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK  514 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~  514 (567)
                      +++..+...+.-.... ...+|+..+|+.+-+++|+    -+.+|++..+.
T Consensus       249 ~~~~~~~~~lgv~~~~-~i~VGDs~~Di~aa~~AG~----~va~~~~~~~~  294 (317)
T 4eze_A          249 QTLVDLAARLNIATEN-IIACGDGANDLPMLEHAGT----GIAWKAKPVVR  294 (317)
T ss_dssp             HHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSE----EEEESCCHHHH
T ss_pred             HHHHHHHHHcCCCcce-EEEEeCCHHHHHHHHHCCC----eEEeCCCHHHH
Confidence            5555554433322222 4578999999999999997    23457654443

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=97.56  E-value=7.8e-05  Score=69.05  Aligned_cols=130  Identities=17%  Similarity=0.198  Sum_probs=75.3

Q ss_pred             CCCeEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCccc------------chHHHHHH
Q psy12533        356 WNDKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIG------------QSRVTREY  422 (567)
Q Consensus       356 ~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~------------qa~~Tr~~  422 (567)
                      ..-|+|++|.||||+..-. +.+.......+ ..||+.++.+.++++||++.-+|..+..            ....++..
T Consensus        12 ~~~k~~~~D~Dgtl~~~~~-~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~   90 (176)
T 2fpr_A           12 SSQKYLFIDRDGTLISEPP-SDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI   90 (176)
T ss_dssp             -CCEEEEECSBTTTBCCC---CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHH
T ss_pred             CcCcEEEEeCCCCeEcCCC-CCcCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHH
Confidence            5678999999999987621 11211112233 6789999999999999999999997321            23445566


Q ss_pred             HHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        423 LQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       423 L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      |+.     .+++---+++++...    ..++..++|  +.|...+ +.+. + .+ ...+  -+|++.+|+.+=+++|+.
T Consensus        91 l~~-----~gl~fd~v~~s~~~~----~~~~~~~KP~p~~~~~~~-~~~g-i-~~-~~~l--~VGD~~~Di~~A~~aG~~  155 (176)
T 2fpr_A           91 FTS-----QGVQFDEVLICPHLP----ADECDCRKPKVKLVERYL-AEQA-M-DR-ANSY--VIGDRATDIQLAENMGIN  155 (176)
T ss_dssp             HHH-----TTCCEEEEEEECCCG----GGCCSSSTTSCGGGGGGC------C-CG-GGCE--EEESSHHHHHHHHHHTSE
T ss_pred             HHH-----cCCCeeEEEEcCCCC----cccccccCCCHHHHHHHH-HHcC-C-CH-HHEE--EEcCCHHHHHHHHHcCCe
Confidence            665     455411122232100    122333344  5555432 2221 1 11 2233  567889999999999997


Q ss_pred             C
Q psy12533        501 L  501 (567)
Q Consensus       501 ~  501 (567)
                      .
T Consensus       156 ~  156 (176)
T 2fpr_A          156 G  156 (176)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=97.55  E-value=0.00017  Score=66.48  Aligned_cols=95  Identities=14%  Similarity=0.156  Sum_probs=58.9

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++...++++|+++..+|+.+.   ...+..|+.     .++..-     .+..+.+  .++...+|   |-+.+
T Consensus        92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~-----~~l~~~-----f~~~~~~--~~~~~~kp---~~~~~  153 (233)
T 3s6j_A           92 ALPGAVELLETLDKENLKWCIATSGGI---DTATINLKA-----LKLDIN-----KINIVTR--DDVSYGKP---DPDLF  153 (233)
T ss_dssp             ECTTHHHHHHHHHHTTCCEEEECSSCH---HHHHHHHHT-----TTCCTT-----SSCEECG--GGSSCCTT---STHHH
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCch---hhHHHHHHh-----cchhhh-----hheeecc--ccCCCCCC---ChHHH
Confidence            345888999999999999999999754   344666665     333320     1111111  12223444   33444


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      +.+...+.-...- ...||+..+|+.+-+++|+.
T Consensus       154 ~~~~~~l~~~~~~-~i~iGD~~~Di~~a~~aG~~  186 (233)
T 3s6j_A          154 LAAAKKIGAPIDE-CLVIGDAIWDMLAARRCKAT  186 (233)
T ss_dssp             HHHHHHTTCCGGG-EEEEESSHHHHHHHHHTTCE
T ss_pred             HHHHHHhCCCHHH-EEEEeCCHHhHHHHHHCCCE
Confidence            4455444322222 56899999999999999984

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=97.54  E-value=0.00011  Score=66.71  Aligned_cols=99  Identities=16%  Similarity=0.293  Sum_probs=59.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee-----cCCCchhhhhhhhhhccChhH-
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML-----LNPTSLLNAFHTEVIEKKPQE-  185 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll-----lsp~~l~~al~REvi~k~p~~-  185 (567)
                      ..+|+.++...++++|+++.-+|+.+.   ..++..++.     .+++.-.++     .+.++.+.    ++..++|.. 
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  150 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLS---ESIQPFADY-----LNIPRENIFAVETIWNSDGSFK----ELDNSNGACD  150 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHH-----HTCCGGGEEEEEEEECTTSBEE----EEECTTSTTT
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcH---HHHHHHHHH-----cCCCcccEEEeeeeecCCCcee----ccCCCCCCcc
Confidence            557899999999999999999999654   344566665     444432222     21222211    122333332 


Q ss_pred             HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCC
Q psy12533        186 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLS  227 (567)
Q Consensus       186 fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~  227 (567)
                      -|...+.+...+=|   .. ...||+..+|+.+- ++|+..-
T Consensus       151 ~~~~~l~~~~~~~~---~~-~~~vGD~~~Di~~~-~~G~~~~  187 (219)
T 3kd3_A          151 SKLSAFDKAKGLID---GE-VIAIGDGYTDYQLY-EKGYATK  187 (219)
T ss_dssp             CHHHHHHHHGGGCC---SE-EEEEESSHHHHHHH-HHTSCSE
T ss_pred             cHHHHHHHHhCCCC---CC-EEEEECCHhHHHHH-hCCCCcE
Confidence            35555555444322   22 67899999999995 6787653

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=97.53  E-value=2.9e-05  Score=70.10  Aligned_cols=120  Identities=9%  Similarity=0.085  Sum_probs=70.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISC  190 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~-GPlllsp~~l~~al~REvi~k~p~~fKi~~  190 (567)
                      ..+|+.++.+.++++||++..+|+.+.......    +.     .++.. ...+...+..+..     ....|. -|...
T Consensus        80 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~-~k~~~  144 (201)
T 4ap9_A           80 VSPEARELVETLREKGFKVVLISGSFEEVLEPF----KE-----LGDEFMANRAIFEDGKFQG-----IRLRFR-DKGEF  144 (201)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG----TT-----TSSEEEEEEEEEETTEEEE-----EECCSS-CHHHH
T ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH----HH-----cCchhheeeEEeeCCceEC-----CcCCcc-CHHHH
Confidence            456899999999999999999998765443221    11     22211 1111111111110     111222 27777


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccccccHHhHHhhhhhcC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMF  261 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~f  261 (567)
                      ++.+    ++  .. ...||+..+|+.+-+++|++    +.++...+    .......+...|.++++.+.
T Consensus       145 l~~l----~~--~~-~i~iGD~~~Di~~~~~ag~~----v~~~~~~~----~ad~v~~~~~el~~~l~~l~  200 (201)
T 4ap9_A          145 LKRF----RD--GF-ILAMGDGYADAKMFERADMG----IAVGREIP----GADLLVKDLKELVDFIKNLK  200 (201)
T ss_dssp             HGGG----TT--SC-EEEEECTTCCHHHHHHCSEE----EEESSCCT----TCSEEESSHHHHHHHHHTCC
T ss_pred             HHhc----Cc--Cc-EEEEeCCHHHHHHHHhCCce----EEECCCCc----cccEEEccHHHHHHHHHHhh
Confidence            6666    22  22 56789999999999999994    35555444    22234567777777776653

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=97.52  E-value=0.00023  Score=67.64  Aligned_cols=96  Identities=15%  Similarity=0.133  Sum_probs=54.9

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++...++++||++..+|+.+....   +..|+.+.-.++. .. -++ +.+        ++...+|   |-+.+
T Consensus       112 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~---~~~l~~~~~~~~~-~~-~~~-~~~--------~~~~~kp---~~~~~  174 (277)
T 3iru_A          112 LIPGWKEVFDKLIAQGIKVGGNTGYGPGMM---APALIAAKEQGYT-PA-STV-FAT--------DVVRGRP---FPDMA  174 (277)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHHHHHTTCC-CS-EEE-CGG--------GSSSCTT---SSHHH
T ss_pred             cCcCHHHHHHHHHHcCCeEEEEeCCchHHH---HHHHHhcCcccCC-Cc-eEe-cHH--------hcCCCCC---CHHHH
Confidence            356888999999999999999999765443   4444442111111 11 111 111        1222344   22333


Q ss_pred             HHHHHhCCCCC-CCEEEecCCcccchhhhhhcCCC
Q psy12533        192 RDIMALFPPNT-QPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       192 ~~i~~lf~~~~-~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      ..+...+.-.. .- ...||++.+|+.+=+++|+.
T Consensus       175 ~~~~~~lgi~~~~~-~i~vGD~~~Di~~a~~aG~~  208 (277)
T 3iru_A          175 LKVALELEVGHVNG-CIKVDDTLPGIEEGLRAGMW  208 (277)
T ss_dssp             HHHHHHHTCSCGGG-EEEEESSHHHHHHHHHTTCE
T ss_pred             HHHHHHcCCCCCcc-EEEEcCCHHHHHHHHHCCCe
Confidence            33333332111 12 56888999999999999983

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=97.52  E-value=0.00052  Score=65.14  Aligned_cols=54  Identities=19%  Similarity=0.306  Sum_probs=38.8

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  423 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L  423 (567)
                      -|+|+||+||||..++          +  ..+++.+..+.++++|++++++|+|+..........|
T Consensus         7 ik~i~fDlDGTLld~~----------~--~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l   60 (259)
T 2ho4_A            7 LKAVLVDLNGTLHIED----------A--AVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERL   60 (259)
T ss_dssp             CCEEEEESSSSSCC---------------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHH
T ss_pred             CCEEEEeCcCcEEeCC----------E--eCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHH
Confidence            4789999999999863          1  2356778889999999999999976654443333333

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=97.52  E-value=8.6e-05  Score=69.09  Aligned_cols=101  Identities=14%  Similarity=0.230  Sum_probs=57.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhcc--ChhHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEK--KPQEFKI  463 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k--~p~~fK~  463 (567)
                      ..+|+.+++..++++||++..+|+.+.     ++..|..     .++..- ..+.+.+        ++...  +|+.|+.
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-----~~~~l~~-----~gl~~~f~~i~~~~--------~~~~~Kp~~~~~~~  154 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN-----APKILRR-----LAIIDDFHAIVDPT--------TLAKGKPDPDIFLT  154 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHH-----TTCTTTCSEECCC-----------------CCHHHH
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh-----HHHHHHH-----cCcHhhcCEEeeHh--------hCCCCCCChHHHHH
Confidence            478999999999999999999999743     4566665     333210 0111111        22223  3455554


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccc
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK  514 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~  514 (567)
                      .+ +.    ++-.... ...||++.+|+.+=+++|+.   +..+|...++.
T Consensus       155 ~~-~~----lgi~~~~-~i~vGDs~~Di~~a~~aG~~---~~~~~~~~~~~  196 (233)
T 3nas_A          155 AA-AM----LDVSPAD-CAAIEDAEAGISAIKSAGMF---AVGVGQGQPML  196 (233)
T ss_dssp             HH-HH----HTSCGGG-EEEEECSHHHHHHHHHTTCE---EEECC------
T ss_pred             HH-HH----cCCCHHH-EEEEeCCHHHHHHHHHcCCE---EEEECCccccc
Confidence            33 22    2211222 45889999999999999994   55556654443

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=97.51  E-value=0.00016  Score=65.31  Aligned_cols=101  Identities=13%  Similarity=0.119  Sum_probs=58.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++.+.++++|+++..+|+.+.   ...+..|+.     .++..  .   .+..+.+  .++...+|+   -+.+
T Consensus        90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~-----~~l~~--~---f~~~~~~--~~~~~~kp~---~~~~  151 (214)
T 3e58_A           90 IFPDVLKVLNEVKSQGLEIGLASSSVK---ADIFRALEE-----NRLQG--F---FDIVLSG--EEFKESKPN---PEIY  151 (214)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHH-----TTCGG--G---CSEEEEG--GGCSSCTTS---SHHH
T ss_pred             cCchHHHHHHHHHHCCCCEEEEeCCcH---HHHHHHHHH-----cCcHh--h---eeeEeec--ccccCCCCC---hHHH
Confidence            456899999999999999999999754   344556655     22211  0   0111111  122233442   2222


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS  234 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~  234 (567)
                      +.+...+.-...- ...||++.+|+.+=+++|+   ++..++.
T Consensus       152 ~~~~~~~~~~~~~-~~~iGD~~~Di~~a~~aG~---~~~~~~~  190 (214)
T 3e58_A          152 LTALKQLNVQASR-ALIIEDSEKGIAAGVAADV---EVWAIRD  190 (214)
T ss_dssp             HHHHHHHTCCGGG-EEEEECSHHHHHHHHHTTC---EEEEECC
T ss_pred             HHHHHHcCCChHH-eEEEeccHhhHHHHHHCCC---EEEEECC
Confidence            2233222211122 5679999999999999999   4556665

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=97.50  E-value=6.8e-05  Score=70.06  Aligned_cols=95  Identities=11%  Similarity=0.161  Sum_probs=58.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee-----cCCCchhhhhhhhhh------c
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML-----LNPTSLLNAFHTEVI------E  455 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl-----~spd~l~~al~rEvi------~  455 (567)
                      ..||+.++.+.++++||++..+|+.+...   ++..|+.     .+++.-.++     +..++.+.+  .+..      .
T Consensus        87 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~---~~~~l~~-----~gl~~~~~f~~~~~~~~~~~~~~--~~~~~~~~~~~  156 (225)
T 1nnl_A           87 LTPGIRELVSRLQERNVQVFLISGGFRSI---VEHVASK-----LNIPATNVFANRLKFYFNGEYAG--FDETQPTAESG  156 (225)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHH---HHHHHHH-----TTCCGGGEEEECEEECTTSCEEE--ECTTSGGGSTT
T ss_pred             CCccHHHHHHHHHHCCCcEEEEeCChHHH---HHHHHHH-----cCCCcccEEeeeEEEcCCCcEec--CCCCCcccCCC
Confidence            46899999999999999999999987543   4666766     455421111     111111111  1111      1


Q ss_pred             cChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        456 KKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       456 k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                      .+|+     .++.+...++.  .. ...+|++.+|+.+-+++|+
T Consensus       157 ~Kp~-----~~~~~~~~~~~--~~-~~~vGDs~~Di~~a~~ag~  192 (225)
T 1nnl_A          157 GKGK-----VIKLLKEKFHF--KK-IIMIGDGATDMEACPPADA  192 (225)
T ss_dssp             HHHH-----HHHHHHHHHCC--SC-EEEEESSHHHHTTTTTSSE
T ss_pred             chHH-----HHHHHHHHcCC--Cc-EEEEeCcHHhHHHHHhCCe
Confidence            3444     44444333322  22 4589999999999999998

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=97.50  E-value=0.00019  Score=67.55  Aligned_cols=94  Identities=17%  Similarity=0.137  Sum_probs=54.6

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRD  193 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~  193 (567)
                      +|+.++.+.++++|+++..+|+++.   ...+..|+.     .++..  .   -+..+.+  .++...+|+.   +.+..
T Consensus       108 ~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~-----~~l~~--~---f~~~~~~--~~~~~~Kp~~---~~~~~  169 (240)
T 2no4_A          108 PDAAETLEKLKSAGYIVAILSNGND---EMLQAALKA-----SKLDR--V---LDSCLSA--DDLKIYKPDP---RIYQF  169 (240)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHH-----TTCGG--G---CSEEEEG--GGTTCCTTSH---HHHHH
T ss_pred             CCHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHh-----cCcHH--H---cCEEEEc--cccCCCCCCH---HHHHH
Confidence            7999999999999999999999764   344666665     33321  0   0111111  1233344432   22222


Q ss_pred             HHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        194 IMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       194 i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      +...+.-...- ...+|+..+|+.+=+++|+..
T Consensus       170 ~~~~~~~~~~~-~~~iGD~~~Di~~a~~aG~~~  201 (240)
T 2no4_A          170 ACDRLGVNPNE-VCFVSSNAWDLGGAGKFGFNT  201 (240)
T ss_dssp             HHHHHTCCGGG-EEEEESCHHHHHHHHHHTCEE
T ss_pred             HHHHcCCCccc-EEEEeCCHHHHHHHHHCCCEE
Confidence            22222211112 345688899999999999863

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=97.50  E-value=0.00055  Score=66.37  Aligned_cols=132  Identities=13%  Similarity=0.130  Sum_probs=70.1

Q ss_pred             cchhHHHHHHHHHHCCc--eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGY--KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY--~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~  189 (567)
                      ..+|+.++...++++||  ++..+|+.+....   +..|+.+.=  ...-.+ ++.+....     .++...+|   |-+
T Consensus       143 ~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~---~~~l~~~gl--~~~fd~-v~~~~~~~-----~~~~~~Kp---~~~  208 (282)
T 3nuq_A          143 PDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHA---IRCLRLLGI--ADLFDG-LTYCDYSR-----TDTLVCKP---HVK  208 (282)
T ss_dssp             CCHHHHHHHHHHHHSSSCSEEEEECSSCHHHH---HHHHHHHTC--TTSCSE-EECCCCSS-----CSSCCCTT---SHH
T ss_pred             cChhHHHHHHHHHhCCCCceEEEEECCChHHH---HHHHHhCCc--ccccce-EEEeccCC-----CcccCCCc---CHH
Confidence            36699999999999999  9999999765443   444444100  111121 22222110     01122344   333


Q ss_pred             HHHHHHHhCCCCC-CCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc-----ccccccccHHhHHhhhhhcC
Q psy12533        190 CLRDIMALFPPNT-QPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE-----MTQTFQSTYSNMSYLVDQMF  261 (567)
Q Consensus       190 ~L~~i~~lf~~~~-~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~-----~~~~~~~sY~~l~~~vd~~f  261 (567)
                      +++.+...+.-.. .- ...+|++.+|+.+=+++|+..   .+.+..++....     .......+...|.+++..+|
T Consensus       209 ~~~~~~~~lgi~~~~~-~i~vGD~~~Di~~a~~aG~~~---~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~lf  282 (282)
T 3nuq_A          209 AFEKAMKESGLARYEN-AYFIDDSGKNIETGIKLGMKT---CIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF  282 (282)
T ss_dssp             HHHHHHHHHTCCCGGG-EEEEESCHHHHHHHHHHTCSE---EEEECSCCC----CCCCTTCEEESSGGGGGGTSGGGC
T ss_pred             HHHHHHHHcCCCCccc-EEEEcCCHHHHHHHHHCCCeE---EEEEcCCccccccccCCCCCEEeCCHHHHHHHhhhhC
Confidence            4444444333211 22 567899999999999999842   233333333221     11123455666666665554

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=97.49  E-value=0.00011  Score=68.39  Aligned_cols=114  Identities=13%  Similarity=0.177  Sum_probs=67.7

Q ss_pred             CCcEEEEecCCccccCCcccccccccccccc--chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWA--QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  159 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwt--h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP  159 (567)
                      .-|+|+||+||||+.+..   ++..-+....  +..-..+.+.++++|+++..+|+++...   ++.+++.     .+++
T Consensus        25 ~ik~vifD~DGTL~~~~~---~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~~---~~~~l~~-----lgl~   93 (188)
T 2r8e_A           25 NIRLLILDVDGVLSDGLI---YMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKL---VEDRCAT-----LGIT   93 (188)
T ss_dssp             TCSEEEECCCCCCBCSEE---EEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCHH---HHHHHHH-----HTCC
T ss_pred             cCCEEEEeCCCCcCCCCE---EecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChHH---HHHHHHH-----cCCc
Confidence            457899999999998542   1111121111  1111237888999999999999998654   4556655     3343


Q ss_pred             CCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        160 EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       160 ~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                        .+       |..     ...+|     +.++.+...+.-... -...+|++.+|+.+-+++|+..
T Consensus        94 --~~-------~~~-----~kpk~-----~~~~~~~~~~g~~~~-~~~~iGD~~~Di~~a~~ag~~~  140 (188)
T 2r8e_A           94 --HL-------YQG-----QSNKL-----IAFSDLLEKLAIAPE-NVAYVGDDLIDWPVMEKVGLSV  140 (188)
T ss_dssp             --EE-------ECS-----CSCSH-----HHHHHHHHHHTCCGG-GEEEEESSGGGHHHHTTSSEEE
T ss_pred             --ee-------ecC-----CCCCH-----HHHHHHHHHcCCCHH-HEEEECCCHHHHHHHHHCCCEE
Confidence              11       111     12333     334444333321111 2567899999999999999864

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=97.47  E-value=0.00017  Score=67.23  Aligned_cols=122  Identities=13%  Similarity=0.103  Sum_probs=67.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccC--hhHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKK--PQEFK  187 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~--p~~fK  187 (567)
                      ..+|+.++...++++|+++..+|+.+..   ..+..|+.     .++..  --++.+ +        ++...+  |+.|+
T Consensus       105 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~-----~~l~~~f~~~~~~-~--------~~~~~kp~~~~~~  167 (237)
T 4ex6_A          105 LYPGVLEGLDRLSAAGFRLAMATSKVEK---AARAIAEL-----TGLDTRLTVIAGD-D--------SVERGKPHPDMAL  167 (237)
T ss_dssp             BCTTHHHHHHHHHHTTEEEEEECSSCHH---HHHHHHHH-----HTGGGTCSEEECT-T--------TSSSCTTSSHHHH
T ss_pred             cCCCHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHH-----cCchhheeeEEeC-C--------CCCCCCCCHHHHH
Confidence            4668999999999999999999997653   34455554     22211  111111 1        122233  34444


Q ss_pred             HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCc----eeccccccccccHHhHHhhhhh
Q psy12533        188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE----VKHEMTQTFQSTYSNMSYLVDQ  259 (567)
Q Consensus       188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~----~~~~~~~~~~~sY~~l~~~vd~  259 (567)
                      ..     ...+.-...- ...||+..+|+.+-+++|++.   ..|.....    +..........+...|.+++..
T Consensus       168 ~~-----~~~lg~~~~~-~i~vGD~~~Di~~a~~aG~~~---i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~  234 (237)
T 4ex6_A          168 HV-----ARGLGIPPER-CVVIGDGVPDAEMGRAAGMTV---IGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLD  234 (237)
T ss_dssp             HH-----HHHHTCCGGG-EEEEESSHHHHHHHHHTTCEE---EEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHH
T ss_pred             HH-----HHHcCCCHHH-eEEEcCCHHHHHHHHHCCCeE---EEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHc
Confidence            33     3322211122 568999999999999999863   33433211    1111222235666666666554

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=97.47  E-value=0.0003  Score=74.45  Aligned_cols=56  Identities=25%  Similarity=0.542  Sum_probs=45.0

Q ss_pred             CCCcEEEEecCCccccCCcccccccccccccc--chhHHHHHHHHHHCCceEEEEccCc
Q psy12533         81 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWA--QNGVTRLFTKIKENGYKLLYLSARA  137 (567)
Q Consensus        81 ~~~kiVISDIDGTITkSD~lG~il~~lGkDwt--h~GVa~Ly~~i~~nGY~ilYLSaRp  137 (567)
                      ...|+|+||+||||..+.. |..++.-..+|.  .+||.++.+.++++||++..+|+++
T Consensus        56 ~~~k~v~fD~DGTL~~~~~-~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~  113 (416)
T 3zvl_A           56 PQGKVAAFDLDGTLITTRS-GKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQM  113 (416)
T ss_dssp             CCSSEEEECSBTTTEECSS-CSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred             CCCeEEEEeCCCCccccCC-CccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCc
Confidence            4568999999999986543 333444556775  5899999999999999999999976

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=97.46  E-value=0.00025  Score=64.69  Aligned_cols=94  Identities=14%  Similarity=0.128  Sum_probs=55.4

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  467 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~  467 (567)
                      .+|+.+++..++++|+++..+|+.+..   ..+..+..     .++..-     .+..+.+  .++...+|   |...+.
T Consensus        91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~~~~-----~~~~~~-----~~~~~~~--~~~~~~k~---~~~~~~  152 (225)
T 3d6j_A           91 FPDTLPTLTHLKKQGIRIGIISTKYRF---RILSFLRN-----HMPDDW-----FDIIIGG--EDVTHHKP---DPEGLL  152 (225)
T ss_dssp             CTTHHHHHHHHHHHTCEEEEECSSCHH---HHHHHHHT-----SSCTTC-----CSEEECG--GGCSSCTT---STHHHH
T ss_pred             CcCHHHHHHHHHHCCCeEEEEECCCHH---HHHHHHHH-----cCchhh-----eeeeeeh--hhcCCCCC---ChHHHH
Confidence            578889999999999999999997643   34555554     333210     1111110  11222344   122333


Q ss_pred             HHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        468 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       468 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      .+...+.-.... ...||+..+|+.+-+.+|+.
T Consensus       153 ~~~~~~~~~~~~-~i~iGD~~nDi~~~~~aG~~  184 (225)
T 3d6j_A          153 LAIDRLKACPEE-VLYIGDSTVDAGTAAAAGVS  184 (225)
T ss_dssp             HHHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             HHHHHhCCChHH-eEEEcCCHHHHHHHHHCCCe
Confidence            333333322223 45899999999999999985

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=97.46  E-value=0.00022  Score=67.09  Aligned_cols=111  Identities=17%  Similarity=0.298  Sum_probs=68.0

Q ss_pred             CCcEEEEecCCccccCCcccccccccc---ccc-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMG---KDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lG---kDw-th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      .-|+|+||+||||+.+...   +...+   +.| ...|+  ..+.++++||++..+|+++...   ++..++.     .+
T Consensus        18 ~ik~vifD~DGtL~~~~~~---~~~~~~~~~~~~~~d~~--~l~~L~~~g~~~~ivTn~~~~~---~~~~l~~-----lg   84 (191)
T 3n1u_A           18 KIKCLICDVDGVLSDGLLH---IDNHGNELKSFHVQDGM--GLKLLMAAGIQVAIITTAQNAV---VDHRMEQ-----LG   84 (191)
T ss_dssp             TCSEEEECSTTTTBCSCCE---ECTTCCEECCBCHHHHH--HHHHHHHTTCEEEEECSCCSHH---HHHHHHH-----HT
T ss_pred             cCCEEEEeCCCCCCCCcee---ecCCchhhhhccccChH--HHHHHHHCCCeEEEEeCcChHH---HHHHHHH-----cC
Confidence            3578999999999986431   11111   122 23344  4788999999999999987544   4556665     44


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        158 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       158 LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      ++.         .|..     +..+|+.++     .+...+.-...- .+.+|++.+|+.+-+.+|+.
T Consensus        85 l~~---------~~~~-----~kpk~~~~~-----~~~~~~~~~~~~-~~~vGD~~~Di~~~~~ag~~  132 (191)
T 3n1u_A           85 ITH---------YYKG-----QVDKRSAYQ-----HLKKTLGLNDDE-FAYIGDDLPDLPLIQQVGLG  132 (191)
T ss_dssp             CCE---------EECS-----CSSCHHHHH-----HHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             Ccc---------ceeC-----CCChHHHHH-----HHHHHhCCCHHH-EEEECCCHHHHHHHHHCCCE
Confidence            442         2211     133443333     333322211122 56799999999999999986

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=97.46  E-value=0.00029  Score=64.57  Aligned_cols=96  Identities=21%  Similarity=0.214  Sum_probs=58.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~--p~~fK~~  464 (567)
                      ..+|+.+ .+.++++ |++..+|+++.   ..++..|+.     .++..  .   -+..+++  .++...+  |+.|+. 
T Consensus        75 ~~~~~~~-l~~l~~~-~~~~i~t~~~~---~~~~~~l~~-----~~l~~--~---f~~~~~~--~~~~~~Kp~~~~~~~-  136 (201)
T 2w43_A           75 AYEDTKY-LKEISEI-AEVYALSNGSI---NEVKQHLER-----NGLLR--Y---FKGIFSA--ESVKEYKPSPKVYKY-  136 (201)
T ss_dssp             ECGGGGG-HHHHHHH-SEEEEEESSCH---HHHHHHHHH-----TTCGG--G---CSEEEEG--GGGTCCTTCHHHHHH-
T ss_pred             cCCChHH-HHHHHhC-CeEEEEeCcCH---HHHHHHHHH-----CCcHH--h---CcEEEeh--hhcCCCCCCHHHHHH-
Confidence            3588999 9999999 99999999863   344666665     33321  0   1122211  1222334  555554 


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  510 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  510 (567)
                      +++.+.   |.  .  ...+|++.+|+.+=+++|+.   ...++..
T Consensus       137 ~~~~~~---~~--~--~~~vGD~~~Di~~a~~aG~~---~~~~~~~  172 (201)
T 2w43_A          137 FLDSIG---AK--E--AFLVSSNAFDVIGAKNAGMR---SIFVNRK  172 (201)
T ss_dssp             HHHHHT---CS--C--CEEEESCHHHHHHHHHTTCE---EEEECSS
T ss_pred             HHHhcC---CC--c--EEEEeCCHHHhHHHHHCCCE---EEEECCC
Confidence            333332   22  2  24689999999999999995   3445553

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=97.45  E-value=5.7e-05  Score=77.14  Aligned_cols=109  Identities=18%  Similarity=0.239  Sum_probs=64.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC----CCchh-hhhhhhhhccChhHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN----PTSLL-NAFHTEVIEKKPQEF  186 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPllls----p~~l~-~al~REvi~k~p~~f  186 (567)
                      ..+|+.++.+.++++||++.-+|+.+   ...++..++.     .++..  ++-+    .++.+ .-+..++...+|   
T Consensus       180 l~pg~~e~L~~Lk~~G~~v~IvSn~~---~~~~~~~l~~-----lgl~~--~f~~~l~~~dg~~tg~i~~~~~~~kp---  246 (317)
T 4eze_A          180 LSPGLLTILPVIKAKGFKTAIISGGL---DIFTQRLKAR-----YQLDY--AFSNTVEIRDNVLTDNITLPIMNAAN---  246 (317)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHH-----HTCSE--EEEECEEEETTEEEEEECSSCCCHHH---
T ss_pred             ECcCHHHHHHHHHhCCCEEEEEeCcc---HHHHHHHHHH-----cCCCe--EEEEEEEeeCCeeeeeEecccCCCCC---
Confidence            46799999999999999999999955   4555666665     33321  1110    01000 000011112223   


Q ss_pred             HHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCce
Q psy12533        187 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  238 (567)
Q Consensus       187 Ki~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  238 (567)
                      |-+++..+...+.-...- ...+|+..+|+.+-+++|+.    +.+|++.++
T Consensus       247 kp~~~~~~~~~lgv~~~~-~i~VGDs~~Di~aa~~AG~~----va~~~~~~~  293 (317)
T 4eze_A          247 KKQTLVDLAARLNIATEN-IIACGDGANDLPMLEHAGTG----IAWKAKPVV  293 (317)
T ss_dssp             HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE----EEESCCHHH
T ss_pred             CHHHHHHHHHHcCCCcce-EEEEeCCHHHHHHHHHCCCe----EEeCCCHHH
Confidence            556666655544321222 56789999999999999972    344665444

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=97.45  E-value=0.00064  Score=62.02  Aligned_cols=98  Identities=17%  Similarity=0.185  Sum_probs=57.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccC--hhHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKK--PQEFK  462 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~--p~~fK  462 (567)
                      ..+|+.+++..++++|+++..+|+.+...   .+..+..     .++..  .-++.+.         ++...+  |+.++
T Consensus        95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~l~~-----~~~~~~~~~~~~~~---------~~~~~kp~~~~~~  157 (226)
T 1te2_A           95 LLPGVREAVALCKEQGLLVGLASASPLHM---LEKVLTM-----FDLRDSFDALASAE---------KLPYSKPHPQVYL  157 (226)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHH-----TTCGGGCSEEEECT---------TSSCCTTSTHHHH
T ss_pred             cCccHHHHHHHHHHCCCcEEEEeCCcHHH---HHHHHHh-----cCcHhhCcEEEecc---------ccCCCCCChHHHH
Confidence            35688888899999999999999876433   3455554     22221  1112111         111233  44443


Q ss_pred             HHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCC
Q psy12533        463 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  510 (567)
Q Consensus       463 ~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  510 (567)
                           .+...+.-.... ...||+..+|+.+-+.+|+.   +..++..
T Consensus       158 -----~~~~~~~i~~~~-~i~iGD~~nDi~~a~~aG~~---~~~~~~~  196 (226)
T 1te2_A          158 -----DCAAKLGVDPLT-CVALEDSVNGMIASKAARMR---SIVVPAP  196 (226)
T ss_dssp             -----HHHHHHTSCGGG-EEEEESSHHHHHHHHHTTCE---EEECCCT
T ss_pred             -----HHHHHcCCCHHH-eEEEeCCHHHHHHHHHcCCE---EEEEcCC
Confidence                 333222212223 46899999999999999985   4444443

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=97.44  E-value=0.00058  Score=62.95  Aligned_cols=95  Identities=15%  Similarity=0.241  Sum_probs=57.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.+++..++++||++..+|+.+.   ..++..|..     .++..     ..+..++  ..++...+|   |-+.+
T Consensus        87 ~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~-----~~l~~-----~f~~~~~--~~~~~~~kp---~~~~~  148 (226)
T 3mc1_A           87 VYDGIEALLSSLKDYGFHLVVATSKPT---VFSKQILEH-----FKLAF-----YFDAIVG--SSLDGKLST---KEDVI  148 (226)
T ss_dssp             BCTTHHHHHHHHHHHTCEEEEEEEEEH---HHHHHHHHH-----TTCGG-----GCSEEEE--ECTTSSSCS---HHHHH
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----hCCHh-----heeeeec--cCCCCCCCC---CHHHH
Confidence            457899999999999999999998754   334566655     33321     0011111  011222344   33344


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +.+...+.-.... ...||++.+|+.+=+++|+.
T Consensus       149 ~~~~~~lgi~~~~-~i~iGD~~~Di~~a~~aG~~  181 (226)
T 3mc1_A          149 RYAMESLNIKSDD-AIMIGDREYDVIGALKNNLP  181 (226)
T ss_dssp             HHHHHHHTCCGGG-EEEEESSHHHHHHHHTTTCC
T ss_pred             HHHHHHhCcCccc-EEEECCCHHHHHHHHHCCCC
Confidence            4444333322223 46899999999999999995

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.41  E-value=0.00035  Score=68.97  Aligned_cols=71  Identities=18%  Similarity=0.309  Sum_probs=51.2

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      -|+|+||+||||..++.           ...+...+..++++++|.+|+.+|||+....   +.++..+   +...|.+|
T Consensus         5 ~kli~~DlDGTLl~~~~-----------~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~---~~~~~~l---~l~~~~~~   67 (282)
T 1rkq_A            5 IKLIAIDMDGTLLLPDH-----------TISPAVKNAIAAARARGVNVVLTTGRPYAGV---HNYLKEL---HMEQPGDY   67 (282)
T ss_dssp             CCEEEECCCCCCSCTTS-----------CCCHHHHHHHHHHHHTTCEEEEECSSCGGGT---HHHHHHT---TCCSTTCE
T ss_pred             ceEEEEeCCCCCCCCCC-----------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHHh---CCCCCCCe
Confidence            37899999999998752           1345678889999999999999999997654   6666662   12223357


Q ss_pred             eecCCCch
Q psy12533        438 MLLNPTSL  445 (567)
Q Consensus       438 vl~spd~l  445 (567)
                      ++++....
T Consensus        68 ~I~~NGa~   75 (282)
T 1rkq_A           68 CITYNGAL   75 (282)
T ss_dssp             EEEGGGTE
T ss_pred             EEEeCCeE
Confidence            77655443

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.41  E-value=0.00048  Score=63.65  Aligned_cols=102  Identities=12%  Similarity=0.082  Sum_probs=61.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.+++..++ +||++..+|+.+...   .+..|..     .++..     ..+..+.  ..++...+|   |-+.+
T Consensus       108 ~~~~~~~~l~~l~-~g~~~~i~sn~~~~~---~~~~l~~-----~~l~~-----~f~~~~~--~~~~~~~kp---~~~~~  168 (240)
T 3qnm_A          108 LMPHAKEVLEYLA-PQYNLYILSNGFREL---QSRKMRS-----AGVDR-----YFKKIIL--SEDLGVLKP---RPEIF  168 (240)
T ss_dssp             BSTTHHHHHHHHT-TTSEEEEEECSCHHH---HHHHHHH-----HTCGG-----GCSEEEE--GGGTTCCTT---SHHHH
T ss_pred             cCccHHHHHHHHH-cCCeEEEEeCCchHH---HHHHHHH-----cChHh-----hceeEEE--eccCCCCCC---CHHHH
Confidence            4678999999999 999999999975443   3455554     22210     0111111  112223344   23333


Q ss_pred             HHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCCCCEEEEcCCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRG  511 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g  511 (567)
                      +.+...++-.... ...||++. +|+.+=+++|+   ++..+|..+
T Consensus       169 ~~~~~~lgi~~~~-~~~iGD~~~~Di~~a~~aG~---~~~~~~~~~  210 (240)
T 3qnm_A          169 HFALSATQSELRE-SLMIGDSWEADITGAHGVGM---HQAFYNVTE  210 (240)
T ss_dssp             HHHHHHTTCCGGG-EEEEESCTTTTHHHHHHTTC---EEEEECCSC
T ss_pred             HHHHHHcCCCccc-EEEECCCchHhHHHHHHcCC---eEEEEcCCC
Confidence            3444433322223 46899995 99999999999   466777765

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=97.40  E-value=0.00039  Score=65.77  Aligned_cols=48  Identities=23%  Similarity=0.275  Sum_probs=36.3

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEc---cCcc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLS---ARAI  413 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLS---aRpi  413 (567)
                      -|+|+||+||||..|+..++        -..++.++..+.++++|++++++|   +|+.
T Consensus        12 ~k~i~fDlDGTLl~s~~~~~--------~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~   62 (271)
T 2x4d_A           12 VRGVLLDISGVLYDSGAGGG--------TAIAGSVEAVARLKRSRLKVRFCTNESAASR   62 (271)
T ss_dssp             CCEEEECCBTTTEECCTTTC--------EECTTHHHHHHHHHHSSSEEEEECCCCSSCH
T ss_pred             CCEEEEeCCCeEEecCCCCC--------ccCcCHHHHHHHHHHCCCcEEEEECCCCCCH
Confidence            48899999999998741011        123567787889999999999999   6653

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=97.38  E-value=0.00019  Score=69.68  Aligned_cols=66  Identities=24%  Similarity=0.349  Sum_probs=49.5

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--C
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--E  435 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP--~  435 (567)
                      -|+|+||+||||..|+.          . ..+...+.+++++++|++++..|||+....   +.++..     .+++  .
T Consensus         5 ~kli~fDlDGTLl~~~~----------~-i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~~~~   65 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSKK----------E-ISSRNRETLIRIQEQGIRLVLASGRPTYGI---VPLANE-----LRMNEFG   65 (279)
T ss_dssp             CCEEEECCCCCCSCTTS----------C-CCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH-----TTGGGTT
T ss_pred             ceEEEEeCCCCCCCCCC----------c-cCHHHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHH-----hCCCCCC
Confidence            48899999999998852          1 235678899999999999999999997655   566655     3443  4


Q ss_pred             CceecCC
Q psy12533        436 GPMLLNP  442 (567)
Q Consensus       436 GPvl~sp  442 (567)
                      +|+++..
T Consensus        66 ~~~i~~n   72 (279)
T 4dw8_A           66 GFILSYN   72 (279)
T ss_dssp             CEEEEGG
T ss_pred             CEEEEeC
Confidence            6665533

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=97.38  E-value=0.00058  Score=63.15  Aligned_cols=124  Identities=15%  Similarity=0.254  Sum_probs=69.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++++.++++ |++..+|+.+..   .++..++.     .++..     ..+..+.+  -++...+|  +.|+..
T Consensus       101 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~---~~~~~l~~-----~~~~~-----~f~~~~~~--~~~~~~kp~~~~~~~~  164 (234)
T 3u26_A          101 LYPEVVEVLKSLKGK-YHVGMITDSDTE---QAMAFLDA-----LGIKD-----LFDSITTS--EEAGFFKPHPRIFELA  164 (234)
T ss_dssp             BCTTHHHHHHHHTTT-SEEEEEESSCHH---HHHHHHHH-----TTCGG-----GCSEEEEH--HHHTBCTTSHHHHHHH
T ss_pred             cCcCHHHHHHHHHhC-CcEEEEECCCHH---HHHHHHHH-----cCcHH-----HcceeEec--cccCCCCcCHHHHHHH
Confidence            457889999999999 999999997653   34555555     33321     01122211  12223444  444432


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCCCCEEEEcCCCcccc--cccccccccHhhHHhhhhhc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRGEVKH--EMTQTFQSTYSNMSYLVDQM  535 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g~~~~--~~~~~~~~sY~~l~~~vd~~  535 (567)
                       ++.+    +-.... ...||++. +|+.+=+++|+.   ...|+..+....  +.......+...|.++++.+
T Consensus       165 -~~~~----~~~~~~-~~~vGD~~~~Di~~a~~aG~~---~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~~  229 (234)
T 3u26_A          165 -LKKA----GVKGEE-AVYVGDNPVKDCGGSKNLGMT---SILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL  229 (234)
T ss_dssp             -HHHH----TCCGGG-EEEEESCTTTTHHHHHTTTCE---EEEECSSSTTGGGGGGCSEEESSTHHHHHHHHHH
T ss_pred             -HHHc----CCCchh-EEEEcCCcHHHHHHHHHcCCE---EEEECCCCCccccccCCCEeeCCHHHHHHHHHHH
Confidence             2222    212223 46899997 999999999984   445554332211  11222356666666666554

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=97.37  E-value=0.00018  Score=65.40  Aligned_cols=110  Identities=15%  Similarity=0.182  Sum_probs=60.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhcc-ChhHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEK-KPQEFKIS  464 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k-~p~~fK~~  464 (567)
                      .+|+.++++.++++|+++..+|+|+....   +.+++.     .++..  .-.+...+..   +..++... .+..=|..
T Consensus        78 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~K~~  146 (211)
T 1l7m_A           78 TEGAEETIKELKNRGYVVAVVSGGFDIAV---NKIKEK-----LGLDYAFANRLIVKDGK---LTGDVEGEVLKENAKGE  146 (211)
T ss_dssp             CTTHHHHHHHHHHTTEEEEEEEEEEHHHH---HHHHHH-----HTCSEEEEEEEEEETTE---EEEEEECSSCSTTHHHH
T ss_pred             CccHHHHHHHHHHCCCEEEEEcCCcHHHH---HHHHHH-----cCCCeEEEeeeEEECCE---EcCCcccCccCCccHHH
Confidence            36888999999999999999999986544   445554     22211  0000000100   01111000 00122445


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  513 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  513 (567)
                      .+..+...++-...- ..+||+..+|+.+-+++|+.    +.+++..++
T Consensus       147 ~l~~~~~~lgi~~~~-~~~iGD~~~Di~~~~~ag~~----~~~~~~~~~  190 (211)
T 1l7m_A          147 ILEKIAKIEGINLED-TVAVGDGANDISMFKKAGLK----IAFCAKPIL  190 (211)
T ss_dssp             HHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHCSEE----EEESCCHHH
T ss_pred             HHHHHHHHcCCCHHH-EEEEecChhHHHHHHHCCCE----EEECCCHHH
Confidence            555555433322222 46999999999999999994    345644333

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=97.37  E-value=0.0002  Score=66.89  Aligned_cols=100  Identities=10%  Similarity=0.137  Sum_probs=58.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec-----CCCchhhhhhhhhhccCh-hH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL-----NPTSLLNAFHTEVIEKKP-QE  185 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlll-----sp~~l~~al~REvi~k~p-~~  185 (567)
                      ..+|+.++.+.++++|+++..+|+++..   .++..|+.     .+++.-.++-     ..++.+.+  .+.....+ ..
T Consensus        87 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~---~~~~~l~~-----~gl~~~~~f~~~~~~~~~~~~~~--~~~~~~~~~~~  156 (225)
T 1nnl_A           87 LTPGIRELVSRLQERNVQVFLISGGFRS---IVEHVASK-----LNIPATNVFANRLKFYFNGEYAG--FDETQPTAESG  156 (225)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHH-----TTCCGGGEEEECEEECTTSCEEE--ECTTSGGGSTT
T ss_pred             CCccHHHHHHHHHHCCCcEEEEeCChHH---HHHHHHHH-----cCCCcccEEeeeEEEcCCCcEec--CCCCCcccCCC
Confidence            4579999999999999999999997644   44667766     4454211111     11111100  01110000 01


Q ss_pred             HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533        186 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  224 (567)
Q Consensus       186 fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  224 (567)
                      -|-+.++.+...+..  .. ...+|+..+|+.+-+++|+
T Consensus       157 ~Kp~~~~~~~~~~~~--~~-~~~vGDs~~Di~~a~~ag~  192 (225)
T 1nnl_A          157 GKGKVIKLLKEKFHF--KK-IIMIGDGATDMEACPPADA  192 (225)
T ss_dssp             HHHHHHHHHHHHHCC--SC-EEEEESSHHHHTTTTTSSE
T ss_pred             chHHHHHHHHHHcCC--Cc-EEEEeCcHHhHHHHHhCCe
Confidence            243455555444332  22 5678999999999999998

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=97.37  E-value=0.00027  Score=68.57  Aligned_cols=97  Identities=18%  Similarity=0.184  Sum_probs=53.6

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      -|+|+||+||||..|+.           -..+...+.+++++++|.+++..|||+....   +.++..+   +...|..|
T Consensus         5 ~kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~l---~~~~~~~~   67 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKN-----------ELAQATIDAVQAAKAQGIKVVLCTGRPLTGV---QPYLDAM---DIDGDDQY   67 (279)
T ss_dssp             CCEEEECC----------------------CHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHHT---TCCSSSCE
T ss_pred             eEEEEEcCcCCCCCCCC-----------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHHc---CCCCCCCE
Confidence            48899999999998852           1345677888999999999999999998654   6666652   12233457


Q ss_pred             eecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHh
Q psy12533        438 MLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMA  471 (567)
Q Consensus       438 vl~spd~l~~al~rEvi~k~p--~~fK~~~L~~i~~  471 (567)
                      +++....++..-..+++...+  ...-.++++.++.
T Consensus        68 ~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~~~  103 (279)
T 3mpo_A           68 AITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWARK  103 (279)
T ss_dssp             EEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHHHH
T ss_pred             EEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHHHH
Confidence            776654433112234444333  2223344555554

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=97.37  E-value=0.00055  Score=64.69  Aligned_cols=118  Identities=8%  Similarity=0.062  Sum_probs=71.0

Q ss_pred             CCeEEEEecCCccccCCccccccccc---C-cC-CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIM---G-KD-WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  431 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~---G-kD-w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~  431 (567)
                      .-|+|+||+||||..   .|......   . .. -.-||+.++.+.++++||++.-+|+++..+.   ...+    +  .
T Consensus         5 ~~kav~fDlDGTL~d---~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~---~~~~----~--~   72 (196)
T 2oda_A            5 TFPALLFGLSGCLVD---FGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALS---TPLA----A--P   72 (196)
T ss_dssp             CCSCEEEETBTTTBC---TTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH---HHHH----T--T
T ss_pred             cCCEEEEcCCCceEe---ccccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH---HHhc----C--c
Confidence            347899999999974   22111110   1 11 2468999999999999999999999876554   2211    1  1


Q ss_pred             cCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        432 TLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       432 ~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                       +.+ -++++. ...      .-.++|+.|..++ +.+ .+-++ ..  ..-+|++.+|+.+=+++|+.
T Consensus        73 -~~d-~v~~~~-~~~------~~KP~p~~~~~a~-~~l-~~~~~-~~--~v~VGDs~~Di~aA~~aG~~  127 (196)
T 2oda_A           73 -VND-WMIAAP-RPT------AGWPQPDACWMAL-MAL-NVSQL-EG--CVLISGDPRLLQSGLNAGLW  127 (196)
T ss_dssp             -TTT-TCEECC-CCS------SCTTSTHHHHHHH-HHT-TCSCS-TT--CEEEESCHHHHHHHHHHTCE
T ss_pred             -cCC-EEEECC-cCC------CCCCChHHHHHHH-HHc-CCCCC-cc--EEEEeCCHHHHHHHHHCCCE
Confidence             222 233322 111      1134557666554 222 11111 22  24689999999999999995

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=97.36  E-value=0.00014  Score=67.24  Aligned_cols=130  Identities=18%  Similarity=0.197  Sum_probs=73.6

Q ss_pred             CCCcEEEEecCCccccCCcccccccc-ccccccchhHHHHHHHHHHCCceEEEEccCccc------------chHHHHHH
Q psy12533         81 WNDKIVISDIDGTITKSDVLGHVLPI-MGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG------------QSRVTREY  147 (567)
Q Consensus        81 ~~~kiVISDIDGTITkSD~lG~il~~-lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~------------~a~~Tr~~  147 (567)
                      ...|+|++|.||||+..-. +.+... ...-...+|+.++.+.++++||++.-+|..+-.            ....++..
T Consensus        12 ~~~k~~~~D~Dgtl~~~~~-~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~   90 (176)
T 2fpr_A           12 SSQKYLFIDRDGTLISEPP-SDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI   90 (176)
T ss_dssp             -CCEEEEECSBTTTBCCC---CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHH
T ss_pred             CcCcEEEEeCCCCeEcCCC-CCcCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHH
Confidence            4678999999999987621 111111 112235679999999999999999999997311            23445556


Q ss_pred             HHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        148 LQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       148 L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      |+.     .+++---+++++...    ..++..++|  +.|...+ +.+ .+ .+ ..-  .-+|++.+|+.+=+++|+.
T Consensus        91 l~~-----~gl~fd~v~~s~~~~----~~~~~~~KP~p~~~~~~~-~~~-gi-~~-~~~--l~VGD~~~Di~~A~~aG~~  155 (176)
T 2fpr_A           91 FTS-----QGVQFDEVLICPHLP----ADECDCRKPKVKLVERYL-AEQ-AM-DR-ANS--YVIGDRATDIQLAENMGIN  155 (176)
T ss_dssp             HHH-----TTCCEEEEEEECCCG----GGCCSSSTTSCGGGGGGC------C-CG-GGC--EEEESSHHHHHHHHHHTSE
T ss_pred             HHH-----cCCCeeEEEEcCCCC----cccccccCCCHHHHHHHH-HHc-CC-CH-HHE--EEEcCCHHHHHHHHHcCCe
Confidence            665     445411122232100    012333444  4454432 221 11 11 223  3466888999999999986


Q ss_pred             C
Q psy12533        226 L  226 (567)
Q Consensus       226 ~  226 (567)
                      .
T Consensus       156 ~  156 (176)
T 2fpr_A          156 G  156 (176)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=97.35  E-value=5.8e-05  Score=72.35  Aligned_cols=120  Identities=16%  Similarity=0.106  Sum_probs=71.2

Q ss_pred             CeEEEEecCCccccCCccc----ccccccCc-------------------CCcchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533        358 DKIVISDIDGTITKSDVLG----HVLPIMGK-------------------DWAQNGVTRLFTKIKENGYKLLYLSARAIG  414 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G----~~~~~~Gk-------------------Dw~h~Gva~l~~~i~~nGY~iiYLSaRpi~  414 (567)
                      -|+||||+||||+.+...-    ..+.....                   .-..+|+.++.+.++++||++..+|+++..
T Consensus        37 ~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~~  116 (211)
T 2b82_A           37 PMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPT  116 (211)
T ss_dssp             CCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred             CCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence            5899999999999875311    00000000                   012459999999999999999999999876


Q ss_pred             chHHHHHHHHhcccCCccCCCCceecCCCc-hhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHh
Q psy12533        415 QSRVTREYLQSVKQEDLTLPEGPMLLNPTS-LLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS  493 (567)
Q Consensus       415 qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~-l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~a  493 (567)
                      +...+.+.|..     + |.  -+..+.+. .+   ..  -.++|+.|... ++.+       ..  ..-+|++.+|+.+
T Consensus       117 ~~~~~l~~l~~-----~-f~--~i~~~~~~~~~---~~--~KP~p~~~~~~-~~~~-------g~--~l~VGDs~~Di~a  173 (211)
T 2b82_A          117 KTETVSKTLAD-----N-FH--IPATNMNPVIF---AG--DKPGQNTKSQW-LQDK-------NI--RIFYGDSDNDITA  173 (211)
T ss_dssp             SSCCHHHHHHH-----H-TT--CCTTTBCCCEE---CC--CCTTCCCSHHH-HHHT-------TE--EEEEESSHHHHHH
T ss_pred             HHHHHHHHHHH-----h-cC--ccccccchhhh---cC--CCCCHHHHHHH-HHHC-------CC--EEEEECCHHHHHH
Confidence            66554444432     1 11  01111110 00   00  12234444332 2221       11  5679999999999


Q ss_pred             HHHcCCC
Q psy12533        494 YQAVGIP  500 (567)
Q Consensus       494 Y~~vGIp  500 (567)
                      =+++|+.
T Consensus       174 A~~aG~~  180 (211)
T 2b82_A          174 ARDVGAR  180 (211)
T ss_dssp             HHHTTCE
T ss_pred             HHHCCCe
Confidence            9999996

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=97.33  E-value=0.00018  Score=66.85  Aligned_cols=100  Identities=16%  Similarity=0.278  Sum_probs=55.6

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccC--hhHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKK--PQEFKI  188 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~--p~~fKi  188 (567)
                      ..+|+.++...++++||++..+|+.+.     ++..|+.     .+|..- ..+.+.+        ++...+  |+.|+.
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-----~~~~l~~-----~gl~~~f~~i~~~~--------~~~~~Kp~~~~~~~  154 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN-----APKILRR-----LAIIDDFHAIVDPT--------TLAKGKPDPDIFLT  154 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHH-----TTCTTTCSEECCC-----------------CCHHHH
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh-----HHHHHHH-----cCcHhhcCEEeeHh--------hCCCCCCChHHHHH
Confidence            367999999999999999999999743     4556665     333210 0111111        222233  333443


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCce
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  238 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  238 (567)
                      .+     ..+.-...- ...||++.+|+.+=+++|+.   +..+|...++
T Consensus       155 ~~-----~~lgi~~~~-~i~vGDs~~Di~~a~~aG~~---~~~~~~~~~~  195 (233)
T 3nas_A          155 AA-----AMLDVSPAD-CAAIEDAEAGISAIKSAGMF---AVGVGQGQPM  195 (233)
T ss_dssp             HH-----HHHTSCGGG-EEEEECSHHHHHHHHHTTCE---EEECC-----
T ss_pred             HH-----HHcCCCHHH-EEEEeCCHHHHHHHHHcCCE---EEEECCcccc
Confidence            33     222211122 56789999999999999984   4455554333

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=97.32  E-value=0.00046  Score=64.71  Aligned_cols=93  Identities=12%  Similarity=0.151  Sum_probs=57.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~  464 (567)
                      ..+|+.++++.++++||++..+|+.+.   ..++..|+.     .++..  -.++.+.         ++...+|   |.+
T Consensus       111 ~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~-----~~l~~~f~~~~~~~---------~~~~~kp---~~~  170 (240)
T 3sd7_A          111 IYENMKEILEMLYKNGKILLVATSKPT---VFAETILRY-----FDIDRYFKYIAGSN---------LDGTRVN---KNE  170 (240)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHH-----TTCGGGCSEEEEEC---------TTSCCCC---HHH
T ss_pred             cCccHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHH-----cCcHhhEEEEEecc---------ccCCCCC---CHH
Confidence            567899999999999999999998643   344666665     22210  1112111         1222345   333


Q ss_pred             HHHHHHhhCCCC-CCCEEEecCCCcccHHhHHHcCCC
Q psy12533        465 CLRDIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       465 ~L~~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      .++.+...++-. ... ...||+..+|+.+=+++|+.
T Consensus       171 ~~~~~~~~~g~~~~~~-~i~vGD~~~Di~~a~~aG~~  206 (240)
T 3sd7_A          171 VIQYVLDLCNVKDKDK-VIMVGDRKYDIIGAKKIGID  206 (240)
T ss_dssp             HHHHHHHHHTCCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             HHHHHHHHcCCCCCCc-EEEECCCHHHHHHHHHCCCC
Confidence            344444433322 223 45799999999999999996

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=97.32  E-value=0.00077  Score=65.73  Aligned_cols=80  Identities=14%  Similarity=0.243  Sum_probs=54.5

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      -|+|+||+||||..|+.           -..+...+.+++++++|++++..|||+....   +.++..     .+++ +|
T Consensus         6 ~kli~fDlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----~~~~-~~   65 (290)
T 3dnp_A            6 KQLLALNIDGALLRSNG-----------KIHQATKDAIEYVKKKGIYVTLVTNRHFRSA---QKIAKS-----LKLD-AK   65 (290)
T ss_dssp             CCEEEECCCCCCSCTTS-----------CCCHHHHHHHHHHHHTTCEEEEBCSSCHHHH---HHHHHH-----TTCC-SC
T ss_pred             ceEEEEcCCCCCCCCCC-----------ccCHHHHHHHHHHHHCCCEEEEECCCChHHH---HHHHHH-----cCCC-Ce
Confidence            47899999999998842           1345678889999999999999999998665   566666     4454 35


Q ss_pred             eecCCCchhhhhhhhhhccC
Q psy12533        438 MLLNPTSLLNAFHTEVIEKK  457 (567)
Q Consensus       438 vl~spd~l~~al~rEvi~k~  457 (567)
                      +++......--...+++...
T Consensus        66 ~i~~nGa~i~~~~~~~~~~~   85 (290)
T 3dnp_A           66 LITHSGAYIAEKIDAPFFEK   85 (290)
T ss_dssp             EEEGGGTEEESSTTSCSEEC
T ss_pred             EEEcCCeEEEcCCCCEEEec
Confidence            55544333211234444444

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.31  E-value=0.00063  Score=62.81  Aligned_cols=102  Identities=12%  Similarity=0.095  Sum_probs=61.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.+++..++ +||++..+|+.+..   ..+..|+.     .++..  .   .+..+.+  .++...+|   |-+.+
T Consensus       108 ~~~~~~~~l~~l~-~g~~~~i~sn~~~~---~~~~~l~~-----~~l~~--~---f~~~~~~--~~~~~~kp---~~~~~  168 (240)
T 3qnm_A          108 LMPHAKEVLEYLA-PQYNLYILSNGFRE---LQSRKMRS-----AGVDR--Y---FKKIILS--EDLGVLKP---RPEIF  168 (240)
T ss_dssp             BSTTHHHHHHHHT-TTSEEEEEECSCHH---HHHHHHHH-----HTCGG--G---CSEEEEG--GGTTCCTT---SHHHH
T ss_pred             cCccHHHHHHHHH-cCCeEEEEeCCchH---HHHHHHHH-----cChHh--h---ceeEEEe--ccCCCCCC---CHHHH
Confidence            4568899999999 99999999997543   33455554     22210  0   0111111  12233445   33444


Q ss_pred             HHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCCCCEEEEcCCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRG  236 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g  236 (567)
                      +.+.+.+.-.... ...||++. +|+.+=+++|+.   +..+|..+
T Consensus       169 ~~~~~~lgi~~~~-~~~iGD~~~~Di~~a~~aG~~---~~~~~~~~  210 (240)
T 3qnm_A          169 HFALSATQSELRE-SLMIGDSWEADITGAHGVGMH---QAFYNVTE  210 (240)
T ss_dssp             HHHHHHTTCCGGG-EEEEESCTTTTHHHHHHTTCE---EEEECCSC
T ss_pred             HHHHHHcCCCccc-EEEECCCchHhHHHHHHcCCe---EEEEcCCC
Confidence            4555544322223 56899995 999999999994   56677765

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=97.31  E-value=0.0013  Score=60.61  Aligned_cols=93  Identities=15%  Similarity=0.244  Sum_probs=58.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~  189 (567)
                      ..+|+.++...++++||++..+|+.+.   ..++..|+.     .++..  --++.+.         ++...+|   |-+
T Consensus        87 ~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~-----~~l~~~f~~~~~~~---------~~~~~kp---~~~  146 (226)
T 3mc1_A           87 VYDGIEALLSSLKDYGFHLVVATSKPT---VFSKQILEH-----FKLAFYFDAIVGSS---------LDGKLST---KED  146 (226)
T ss_dssp             BCTTHHHHHHHHHHHTCEEEEEEEEEH---HHHHHHHHH-----TTCGGGCSEEEEEC---------TTSSSCS---HHH
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----hCCHhheeeeeccC---------CCCCCCC---CHH
Confidence            446889999999999999999998643   445566665     33321  0111111         2223344   444


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .++.+...+.-...- ...||++.+|+.+=+++|+.
T Consensus       147 ~~~~~~~~lgi~~~~-~i~iGD~~~Di~~a~~aG~~  181 (226)
T 3mc1_A          147 VIRYAMESLNIKSDD-AIMIGDREYDVIGALKNNLP  181 (226)
T ss_dssp             HHHHHHHHHTCCGGG-EEEEESSHHHHHHHHTTTCC
T ss_pred             HHHHHHHHhCcCccc-EEEECCCHHHHHHHHHCCCC
Confidence            555555444322122 56899999999999999985

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=97.29  E-value=0.00072  Score=63.65  Aligned_cols=127  Identities=12%  Similarity=0.044  Sum_probs=68.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.+++..++++||++..+|+.+....   +..|..  .-...|+.--++.+.+ .      ....++|+.|+..  
T Consensus       110 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~---~~~l~~--~l~~~f~~d~i~~~~~-~------~~~kp~~~~~~~~--  175 (243)
T 3qxg_A          110 RMPGAWELLQKVKSEGLTPMVVTGSGQLSL---LERLEH--NFPGMFHKELMVTAFD-V------KYGKPNPEPYLMA--  175 (243)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECCCCCHHH---HTTHHH--HSTTTCCGGGEECTTT-C------SSCTTSSHHHHHH--
T ss_pred             CCCCHHHHHHHHHHcCCcEEEEeCCcHHHH---HHHHHH--hHHHhcCcceEEeHHh-C------CCCCCChHHHHHH--
Confidence            457899999999999999999998764332   222222  1001121011222211 1      0123344555543  


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccc----ccccccccHhhHHhhhhh
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE----MTQTFQSTYSNMSYLVDQ  534 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~----~~~~~~~sY~~l~~~vd~  534 (567)
                         ...+.-.... ...||++.+|+.+=+++|+..   ..++.......+    .......+...|.+++..
T Consensus       176 ---~~~lg~~~~~-~i~vGD~~~Di~~a~~aG~~~---i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~  240 (243)
T 3qxg_A          176 ---LKKGGLKADE-AVVIENAPLGVEAGHKAGIFT---IAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDT  240 (243)
T ss_dssp             ---HHHTTCCGGG-EEEEECSHHHHHHHHHTTCEE---EEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHH
T ss_pred             ---HHHcCCCHHH-eEEEeCCHHHHHHHHHCCCEE---EEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHh
Confidence               2222222223 458999999999999999953   344442222221    122345666666666554

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.29  E-value=0.00032  Score=69.23  Aligned_cols=70  Identities=19%  Similarity=0.277  Sum_probs=50.3

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  436 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G  436 (567)
                      .-|+|+||+||||..++.  .+         .+...+..++++++|++|+.+|||+....   +.++..     .+++..
T Consensus         8 ~~~li~~DlDGTLl~~~~--~~---------~~~~~~~l~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~~~   68 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDSHS--YD---------WQPAAPWLTRLREANVPVILCSSKTSAEM---LYLQKT-----LGLQGL   68 (275)
T ss_dssp             CCEEEEEECTTTTSCSSC--CS---------CCTTHHHHHHHHHTTCCEEEECSSCHHHH---HHHHHH-----TTCTTS
T ss_pred             CceEEEEeCCCCCCCCCC--cC---------CHHHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCCCC
Confidence            358999999999998741  11         13467889999999999999999987544   667766     344322


Q ss_pred             ceecCCCch
Q psy12533        437 PMLLNPTSL  445 (567)
Q Consensus       437 Pvl~spd~l  445 (567)
                      |+++....+
T Consensus        69 ~~I~~NGa~   77 (275)
T 1xvi_A           69 PLIAENGAV   77 (275)
T ss_dssp             CEEEGGGTE
T ss_pred             eEEEeCCCe
Confidence            666655443

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=97.29  E-value=0.00068  Score=63.19  Aligned_cols=129  Identities=12%  Similarity=0.070  Sum_probs=68.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.+++..++++||++..+|+.+....   +..|..  .-...+..--++. .+..      ....++|+.|+..+ 
T Consensus       109 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~---~~~l~~--~l~~~f~~~~~~~-~~~~------~~~kp~~~~~~~~~-  175 (247)
T 3dv9_A          109 RMPGALEVLTKIKSEGLTPMVVTGSGQTSL---LDRLNH--NFPGIFQANLMVT-AFDV------KYGKPNPEPYLMAL-  175 (247)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSCC---C---HHHHHH--HSTTTCCGGGEEC-GGGC------SSCTTSSHHHHHHH-
T ss_pred             CCCCHHHHHHHHHHcCCcEEEEcCCchHHH---HHHHHh--hHHHhcCCCeEEe-cccC------CCCCCCCHHHHHHH-
Confidence            457999999999999999999998765433   222322  1001111001111 1111      11233445555433 


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccc----ccccccccHhhHHhhhhhcC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE----MTQTFQSTYSNMSYLVDQMF  536 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~----~~~~~~~sY~~l~~~vd~~F  536 (567)
                      +.+    +-.... ...||++.+|+.+-+++|+.   ...|+....-..+    .......+...|.+++..++
T Consensus       176 ~~l----g~~~~~-~i~vGD~~~Di~~a~~aG~~---~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~  241 (247)
T 3dv9_A          176 KKG----GFKPNE-ALVIENAPLGVQAGVAAGIF---TIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQ  241 (247)
T ss_dssp             HHH----TCCGGG-EEEEECSHHHHHHHHHTTSE---EEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHHH
T ss_pred             HHc----CCChhh-eEEEeCCHHHHHHHHHCCCe---EEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHHH
Confidence            222    211222 45899999999999999995   3344442211111    22234567777777766553

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=97.28  E-value=0.00077  Score=64.53  Aligned_cols=82  Identities=18%  Similarity=0.218  Sum_probs=56.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.++...++++|+++.-+|+++...+   +..++.     .++..         .|.    +++..    -|...+
T Consensus       145 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~---~~~~~~-----~gl~~---------~f~----~~~~~----~k~~~~  199 (280)
T 3skx_A          145 IRPESREAISKLKAIGIKCMMLTGDNRFVA---KWVAEE-----LGLDD---------YFA----EVLPH----EKAEKV  199 (280)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH-----HTCSE---------EEC----SCCGG----GHHHHH
T ss_pred             CCHhHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----cCChh---------HhH----hcCHH----HHHHHH
Confidence            458999999999999999999999875544   455555     33321         111    11111    266677


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                      +.+...+    .  ...||+..+|+.+-+++|+
T Consensus       200 k~~~~~~----~--~~~vGD~~nDi~~~~~Ag~  226 (280)
T 3skx_A          200 KEVQQKY----V--TAMVGDGVNDAPALAQADV  226 (280)
T ss_dssp             HHHHTTS----C--EEEEECTTTTHHHHHHSSE
T ss_pred             HHHHhcC----C--EEEEeCCchhHHHHHhCCc
Confidence            7776643    2  3789999999999999996

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=97.27  E-value=0.00087  Score=62.81  Aligned_cols=93  Identities=12%  Similarity=0.158  Sum_probs=58.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~  189 (567)
                      ..+|+.++.+.++++|+++..+|+.+   ...++..|+.     .++..  -.++.+.         ++...+|   |-+
T Consensus       111 ~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~-----~~l~~~f~~~~~~~---------~~~~~kp---~~~  170 (240)
T 3sd7_A          111 IYENMKEILEMLYKNGKILLVATSKP---TVFAETILRY-----FDIDRYFKYIAGSN---------LDGTRVN---KNE  170 (240)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHH-----TTCGGGCSEEEEEC---------TTSCCCC---HHH
T ss_pred             cCccHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHH-----cCcHhhEEEEEecc---------ccCCCCC---CHH
Confidence            45688999999999999999999864   3445666665     22210  1112111         2223445   444


Q ss_pred             HHHHHHHhCCCC-CCCEEEecCCcccchhhhhhcCCC
Q psy12533        190 CLRDIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       190 ~L~~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .++.+...+.-. ..- ...||+..+|+.+=+++|+.
T Consensus       171 ~~~~~~~~~g~~~~~~-~i~vGD~~~Di~~a~~aG~~  206 (240)
T 3sd7_A          171 VIQYVLDLCNVKDKDK-VIMVGDRKYDIIGAKKIGID  206 (240)
T ss_dssp             HHHHHHHHHTCCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             HHHHHHHHcCCCCCCc-EEEECCCHHHHHHHHHCCCC
Confidence            445555444322 222 56789999999999999985

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=97.25  E-value=0.00074  Score=64.42  Aligned_cols=90  Identities=19%  Similarity=0.293  Sum_probs=56.3

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKP--QEFKI  463 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p--~~fK~  463 (567)
                      .+|+.++++.++++||++..+|+.+..   .++..|+.     .++..  ..++. .+        ++...+|  +.|+.
T Consensus       116 ~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~-----~gl~~~f~~~~~-~~--------~~~~~Kp~~~~~~~  178 (243)
T 2hsz_A          116 YPNVKETLEALKAQGYILAVVTNKPTK---HVQPILTA-----FGIDHLFSEMLG-GQ--------SLPEIKPHPAPFYY  178 (243)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHH-----TTCGGGCSEEEC-TT--------TSSSCTTSSHHHHH
T ss_pred             CCCHHHHHHHHHHCCCEEEEEECCcHH---HHHHHHHH-----cCchheEEEEEe-cc--------cCCCCCcCHHHHHH
Confidence            378999999999999999999998644   44666665     33321  11222 11        1223344  45544


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      .+ +.+    .-.... ...+|+..+|+.+-+++|+.
T Consensus       179 ~~-~~~----~~~~~~-~~~vGD~~~Di~~a~~aG~~  209 (243)
T 2hsz_A          179 LC-GKF----GLYPKQ-ILFVGDSQNDIFAAHSAGCA  209 (243)
T ss_dssp             HH-HHH----TCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             HH-HHh----CcChhh-EEEEcCCHHHHHHHHHCCCe
Confidence            32 222    111122 45899999999999999996

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=97.25  E-value=0.00044  Score=66.67  Aligned_cols=56  Identities=34%  Similarity=0.363  Sum_probs=45.3

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      -|+|+||+||||..++.            .-+++.+..++++++|.+++.+|+|+.--......+|..
T Consensus         8 ~kli~~DlDGTLl~~~~------------~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~   63 (268)
T 3qgm_A            8 KKGYIIDIDGVIGKSVT------------PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRS   63 (268)
T ss_dssp             CSEEEEECBTTTEETTE------------ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHH
T ss_pred             CCEEEEcCcCcEECCCE------------eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHH
Confidence            57899999999998742            346799999999999999999999766655555666654

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=97.25  E-value=0.00048  Score=64.68  Aligned_cols=96  Identities=20%  Similarity=0.108  Sum_probs=57.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~~  465 (567)
                      .+|+.++++.++++ |++..+|..+..   ..+..++.     .++.       .+..+.+  .++...+|  +.|+.. 
T Consensus       122 ~~~~~~~l~~l~~~-~~~~i~s~~~~~---~~~~~l~~-----~g~~-------f~~~~~~--~~~~~~kp~~~~~~~~-  182 (254)
T 3umc_A          122 WPDTLAGMHALKAD-YWLAALSNGNTA---LMLDVARH-----AGLP-------WDMLLCA--DLFGHYKPDPQVYLGA-  182 (254)
T ss_dssp             CTTHHHHHHHHTTT-SEEEECCSSCHH---HHHHHHHH-----HTCC-------CSEECCH--HHHTCCTTSHHHHHHH-
T ss_pred             CccHHHHHHHHHhc-CeEEEEeCCCHH---HHHHHHHH-----cCCC-------cceEEee--cccccCCCCHHHHHHH-
Confidence            47889999988885 999999987543   34555555     3332       1222221  12223344  555433 


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  510 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  510 (567)
                          ...++-...- ...||+..+|+.+=+++|+.   +..+|..
T Consensus       183 ----~~~lgi~~~~-~~~iGD~~~Di~~a~~aG~~---~~~~~~~  219 (254)
T 3umc_A          183 ----CRLLDLPPQE-VMLCAAHNYDLKAARALGLK---TAFIARP  219 (254)
T ss_dssp             ----HHHHTCCGGG-EEEEESCHHHHHHHHHTTCE---EEEECCT
T ss_pred             ----HHHcCCChHH-EEEEcCchHhHHHHHHCCCe---EEEEecC
Confidence                3222211222 45788999999999999994   5666743

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=97.24  E-value=0.0012  Score=61.89  Aligned_cols=91  Identities=14%  Similarity=0.155  Sum_probs=57.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhc--cChhHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIE--KKPQEFK  462 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~--k~p~~fK  462 (567)
                      ..+|+.++.+.++++||++..+|+.+..   .++..|+.     .++..  ..++.+.         ++..  ++|+.|+
T Consensus        84 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~-----~gl~~~f~~i~~~~---------~~~~~Kp~~~~~~  146 (222)
T 2nyv_A           84 PYPEIPYTLEALKSKGFKLAVVSNKLEE---LSKKILDI-----LNLSGYFDLIVGGD---------TFGEKKPSPTPVL  146 (222)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHH-----TTCGGGCSEEECTT---------SSCTTCCTTHHHH
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEcCCCHH---HHHHHHHH-----cCCHHHheEEEecC---------cCCCCCCChHHHH
Confidence            4579999999999999999999996543   44666665     33321  1122222         2222  3455554


Q ss_pred             HHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        463 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       463 ~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      ..+ +.+.    -.... ...+|++.+|+.+=+++|+.
T Consensus       147 ~~~-~~~~----~~~~~-~~~vGD~~~Di~~a~~aG~~  178 (222)
T 2nyv_A          147 KTL-EILG----EEPEK-ALIVGDTDADIEAGKRAGTK  178 (222)
T ss_dssp             HHH-HHHT----CCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             HHH-HHhC----CCchh-EEEECCCHHHHHHHHHCCCe
Confidence            433 3321    11122 45789999999999999986

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=97.24  E-value=0.00063  Score=65.67  Aligned_cols=125  Identities=18%  Similarity=0.158  Sum_probs=75.6

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++++.++++||++..+|+.+..    .+..|..     .++..     ..+..+.  ..++...+|  +.|+..
T Consensus       107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~----~~~~l~~-----~gl~~-----~f~~~~~--~~~~~~~Kp~~~~~~~~  170 (263)
T 3k1z_A          107 VLDGAEDTLRECRTRGLRLAVISNFDRR----LEGILGG-----LGLRE-----HFDFVLT--SEAAGWPKPDPRIFQEA  170 (263)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESCCTT----HHHHHHH-----TTCGG-----GCSCEEE--HHHHSSCTTSHHHHHHH
T ss_pred             ECcCHHHHHHHHHhCCCcEEEEeCCcHH----HHHHHHh-----CCcHH-----hhhEEEe--ecccCCCCCCHHHHHHH
Confidence            5678999999999999999999986542    3666666     33321     0112221  123333444  555443


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCCCCEEEEcCCCccccc-----ccccccccHhhHHhhhhhcC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRGEVKHE-----MTQTFQSTYSNMSYLVDQMF  536 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g~~~~~-----~~~~~~~sY~~l~~~vd~~F  536 (567)
                       ++.+    +-...- ...+|++. +|+.+=+++|+.   +..++..+....+     .......+...|.+++..+.
T Consensus       171 -~~~~----g~~~~~-~~~vGD~~~~Di~~a~~aG~~---~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~~~  239 (263)
T 3k1z_A          171 -LRLA----HMEPVV-AAHVGDNYLCDYQGPRAVGMH---SFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDCLE  239 (263)
T ss_dssp             -HHHH----TCCGGG-EEEEESCHHHHTHHHHTTTCE---EEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHHHH
T ss_pred             -HHHc----CCCHHH-EEEECCCcHHHHHHHHHCCCE---EEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHHHH
Confidence             3332    111122 45899996 999999999995   5566765443321     12234577777777777664

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=97.24  E-value=0.00078  Score=63.69  Aligned_cols=48  Identities=23%  Similarity=0.275  Sum_probs=35.8

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEc---cCcc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLS---ARAI  138 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLS---aRpi  138 (567)
                      -|+|+||+||||..|+..++        -..++.++..+.++++|+++.++|   +|+.
T Consensus        12 ~k~i~fDlDGTLl~s~~~~~--------~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~   62 (271)
T 2x4d_A           12 VRGVLLDISGVLYDSGAGGG--------TAIAGSVEAVARLKRSRLKVRFCTNESAASR   62 (271)
T ss_dssp             CCEEEECCBTTTEECCTTTC--------EECTTHHHHHHHHHHSSSEEEEECCCCSSCH
T ss_pred             CCEEEEeCCCeEEecCCCCC--------ccCcCHHHHHHHHHHCCCcEEEEECCCCCCH
Confidence            47999999999998741111        123467777888999999999999   6653

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=97.23  E-value=0.00054  Score=64.74  Aligned_cols=118  Identities=8%  Similarity=0.064  Sum_probs=69.5

Q ss_pred             CCcEEEEecCCccccCCcccccccc---cccc--ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPI---MGKD--WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  156 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~---lGkD--wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~  156 (567)
                      .-|+|+||+||||..   .|.....   ....  ..-+|+.++.+.++++||++.-+|+++..++   ...+.      .
T Consensus         5 ~~kav~fDlDGTL~d---~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~---~~~~~------~   72 (196)
T 2oda_A            5 TFPALLFGLSGCLVD---FGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALS---TPLAA------P   72 (196)
T ss_dssp             CCSCEEEETBTTTBC---TTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH---HHHHT------T
T ss_pred             cCCEEEEcCCCceEe---ccccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH---HHhcC------c
Confidence            347899999999974   2211110   0111  2457999999999999999999999876554   22221      1


Q ss_pred             cCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        157 TLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       157 ~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                       +.. -++.+.+ ..      ....+|+.|..++ +.+ .+-++ ..  ..-+|++.+|+.+=+++|+.
T Consensus        73 -~~d-~v~~~~~-~~------~~KP~p~~~~~a~-~~l-~~~~~-~~--~v~VGDs~~Di~aA~~aG~~  127 (196)
T 2oda_A           73 -VND-WMIAAPR-PT------AGWPQPDACWMAL-MAL-NVSQL-EG--CVLISGDPRLLQSGLNAGLW  127 (196)
T ss_dssp             -TTT-TCEECCC-CS------SCTTSTHHHHHHH-HHT-TCSCS-TT--CEEEESCHHHHHHHHHHTCE
T ss_pred             -cCC-EEEECCc-CC------CCCCChHHHHHHH-HHc-CCCCC-cc--EEEEeCCHHHHHHHHHCCCE
Confidence             111 2332221 11      1233455555544 221 11111 12  34688899999999999985

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=97.23  E-value=0.0011  Score=61.22  Aligned_cols=124  Identities=10%  Similarity=0.127  Sum_probs=68.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.+++..++++ |++..+|+.+..   ..+..|..     .++..    . .+..+.  ..++...+|   |-+.+
T Consensus       104 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~---~~~~~l~~-----~~l~~----~-f~~~~~--~~~~~~~kp---~~~~~  164 (238)
T 3ed5_A          104 LIDGAFDLISNLQQQ-FDLYIVTNGVSH---TQYKRLRD-----SGLFP----F-FKDIFV--SEDTGFQKP---MKEYF  164 (238)
T ss_dssp             BCTTHHHHHHHHHTT-SEEEEEECSCHH---HHHHHHHH-----TTCGG----G-CSEEEE--GGGTTSCTT---CHHHH
T ss_pred             CCccHHHHHHHHHhc-CeEEEEeCCCHH---HHHHHHHH-----cChHh----h-hheEEE--ecccCCCCC---ChHHH
Confidence            467999999999999 999999987643   33555555     22221    0 111111  112223344   22333


Q ss_pred             HHHHhhCC-CCCCCEEEecCCCc-ccHHhHHHcCCCCCCEEEEcCCCcc--cccccccccccHhhHHhhhh
Q psy12533        467 RDIMALFP-PNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRGEV--KHEMTQTFQSTYSNMSYLVD  533 (567)
Q Consensus       467 ~~i~~lf~-~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g~~--~~~~~~~~~~sY~~l~~~vd  533 (567)
                      ..+...++ -.... ...+|++. +|+.+=+++|+..   ..++.....  ..........+...|.+++.
T Consensus       165 ~~~~~~~g~~~~~~-~i~vGD~~~~Di~~a~~aG~~~---i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~  231 (238)
T 3ed5_A          165 NYVFERIPQFSAEH-TLIIGDSLTADIKGGQLAGLDT---CWMNPDMKPNVPEIIPTYEIRKLEELYHILN  231 (238)
T ss_dssp             HHHHHTSTTCCGGG-EEEEESCTTTTHHHHHHTTCEE---EEECTTCCCCTTCCCCSEEESSGGGHHHHHT
T ss_pred             HHHHHHcCCCChhH-eEEECCCcHHHHHHHHHCCCEE---EEECCCCCCCcccCCCCeEECCHHHHHHHHH
Confidence            44444333 22223 46899997 9999999999943   345553211  11111223455566655553

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=97.22  E-value=0.00045  Score=66.07  Aligned_cols=50  Identities=18%  Similarity=0.302  Sum_probs=40.8

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHH
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVT  419 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~T  419 (567)
                      |+|+||+||||+.++.           ...+...+.+++++++|.+++.+|||+.......
T Consensus         4 kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~   53 (231)
T 1wr8_A            4 KAISIDIDGTITYPNR-----------MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAA   53 (231)
T ss_dssp             CEEEEESTTTTBCTTS-----------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHH
T ss_pred             eEEEEECCCCCCCCCC-----------cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHH
Confidence            7899999999998841           1345678899999999999999999987655433

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=97.22  E-value=0.00038  Score=67.62  Aligned_cols=55  Identities=27%  Similarity=0.442  Sum_probs=43.9

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      |+|+||+||||+.++           . ..+++.+.+++++++|++++++|+|+........+.|..
T Consensus         2 k~i~~D~DGtL~~~~-----------~-~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~   56 (263)
T 1zjj_A            2 VAIIFDMDGVLYRGN-----------R-AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLK   56 (263)
T ss_dssp             EEEEEECBTTTEETT-----------E-ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHT
T ss_pred             eEEEEeCcCceEeCC-----------E-eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            689999999999753           1 226789999999999999999999997766555555543

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=97.22  E-value=0.00052  Score=62.59  Aligned_cols=94  Identities=14%  Similarity=0.135  Sum_probs=55.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      .+|+.++...++++|+++..+|+.+.   ...+..++.     .++..-     .+..+.+  .++...+|   |...+.
T Consensus        91 ~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~~~~-----~~~~~~-----~~~~~~~--~~~~~~k~---~~~~~~  152 (225)
T 3d6j_A           91 FPDTLPTLTHLKKQGIRIGIISTKYR---FRILSFLRN-----HMPDDW-----FDIIIGG--EDVTHHKP---DPEGLL  152 (225)
T ss_dssp             CTTHHHHHHHHHHHTCEEEEECSSCH---HHHHHHHHT-----SSCTTC-----CSEEECG--GGCSSCTT---STHHHH
T ss_pred             CcCHHHHHHHHHHCCCeEEEEECCCH---HHHHHHHHH-----cCchhh-----eeeeeeh--hhcCCCCC---ChHHHH
Confidence            46888899999999999999999754   334555555     233210     0111110  11222334   223334


Q ss_pred             HHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .+...+.-...- ...||+..+|+.+-+.+|+.
T Consensus       153 ~~~~~~~~~~~~-~i~iGD~~nDi~~~~~aG~~  184 (225)
T 3d6j_A          153 LAIDRLKACPEE-VLYIGDSTVDAGTAAAAGVS  184 (225)
T ss_dssp             HHHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             HHHHHhCCChHH-eEEEcCCHHHHHHHHHCCCe
Confidence            444444322223 56889999999999999985

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=97.21  E-value=0.0007  Score=66.60  Aligned_cols=100  Identities=13%  Similarity=0.226  Sum_probs=62.7

Q ss_pred             eeCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533        354 WRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  433 (567)
Q Consensus       354 w~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l  433 (567)
                      |...-|+|+||+||||..++          +.-..+...+.+++++++|++++..|||+....   +.++..     .++
T Consensus        17 ~~~~~kli~~DlDGTLl~~~----------~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~---~~~~~~-----l~~   78 (283)
T 3dao_A           17 FQGMIKLIATDIDGTLVKDG----------SLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSE---FKLFAP-----IKH   78 (283)
T ss_dssp             --CCCCEEEECCBTTTBSTT----------CSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHTGG-----GGG
T ss_pred             hccCceEEEEeCcCCCCCCC----------CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH-----cCC
Confidence            66678999999999999874          112346788899999999999999999998655   555555     222


Q ss_pred             CCCceecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHhhC
Q psy12533        434 PEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMALF  473 (567)
Q Consensus       434 P~GPvl~spd~l~~al~rEvi~k~p--~~fK~~~L~~i~~lf  473 (567)
                       ..|+++....+.-- ..+++...+  ...-.++++.++..+
T Consensus        79 -~~~~I~~NGa~i~~-~~~~i~~~~l~~~~~~~i~~~~~~~~  118 (283)
T 3dao_A           79 -KLLYITDGGTVVRT-PKEILKTYPMDEDIWKGMCRMVRDEL  118 (283)
T ss_dssp             -GCEEEETTTTEEEC-SSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred             -CcEEEECCCcEEEE-CCEEEEEecCCHHHHHHHHHHHHHhc
Confidence             23556555443321 234444332  233334555555543

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=97.21  E-value=0.00039  Score=67.46  Aligned_cols=66  Identities=24%  Similarity=0.349  Sum_probs=49.4

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--C
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--E  160 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP--~  160 (567)
                      -|+|+||+||||+.|+.          . -.+...+..++++++|++++.+|+|+....   +.++..     .+++  .
T Consensus         5 ~kli~fDlDGTLl~~~~----------~-i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~~~~   65 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSKK----------E-ISSRNRETLIRIQEQGIRLVLASGRPTYGI---VPLANE-----LRMNEFG   65 (279)
T ss_dssp             CCEEEECCCCCCSCTTS----------C-CCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH-----TTGGGTT
T ss_pred             ceEEEEeCCCCCCCCCC----------c-cCHHHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHH-----hCCCCCC
Confidence            47999999999998852          1 235677888999999999999999997654   566665     3443  5


Q ss_pred             CceecCC
Q psy12533        161 GPMLLNP  167 (567)
Q Consensus       161 GPlllsp  167 (567)
                      +|+++..
T Consensus        66 ~~~i~~n   72 (279)
T 4dw8_A           66 GFILSYN   72 (279)
T ss_dssp             CEEEEGG
T ss_pred             CEEEEeC
Confidence            6666544

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=97.20  E-value=0.00079  Score=61.97  Aligned_cols=124  Identities=15%  Similarity=0.124  Sum_probs=69.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.+++..+++ ||++..+|+.+....   +..+..+.   ..         .+..+.  ..|+...+|  +.|+..
T Consensus       100 ~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~---~~~l~~l~---~~---------fd~i~~--~~~~~~~KP~~~~~~~~  161 (240)
T 3smv_A          100 AFPDTVEALQYLKK-HYKLVILSNIDRNEF---KLSNAKLG---VE---------FDHIIT--AQDVGSYKPNPNNFTYM  161 (240)
T ss_dssp             BCTTHHHHHHHHHH-HSEEEEEESSCHHHH---HHHHTTTC---SC---------CSEEEE--HHHHTSCTTSHHHHHHH
T ss_pred             CCCcHHHHHHHHHh-CCeEEEEeCCChhHH---HHHHHhcC---Cc---------cCEEEE--ccccCCCCCCHHHHHHH
Confidence            56799999999999 899999998764332   33333311   11         122222  224444455  555543


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCCCCEEEEcCC------Ccc----cccccccccccHhhHHhhhh
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSR------GEV----KHEMTQTFQSTYSNMSYLVD  533 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~------g~~----~~~~~~~~~~sY~~l~~~vd  533 (567)
                       |+.+.. ++-.... ...+|++. +|+.+=+++|+.   +..++..      |..    ..........+...|.+++.
T Consensus       162 -l~~~~~-lgi~~~~-~~~vGD~~~~Di~~a~~aG~~---~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l~  235 (240)
T 3smv_A          162 -IDALAK-AGIEKKD-ILHTAESLYHDHIPANDAGLV---SAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAHK  235 (240)
T ss_dssp             -HHHHHH-TTCCGGG-EEEEESCTTTTHHHHHHHTCE---EEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHHH
T ss_pred             -HHHHHh-cCCCchh-EEEECCCchhhhHHHHHcCCe---EEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHHH
Confidence             333222 2222223 35799995 999999999994   4566654      222    11222233466666666554


Q ss_pred             h
Q psy12533        534 Q  534 (567)
Q Consensus       534 ~  534 (567)
                      .
T Consensus       236 ~  236 (240)
T 3smv_A          236 Q  236 (240)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=97.18  E-value=9e-05  Score=71.01  Aligned_cols=121  Identities=17%  Similarity=0.150  Sum_probs=69.9

Q ss_pred             CcEEEEecCCccccCCccc----ccccccccc-------c------------cchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533         83 DKIVISDIDGTITKSDVLG----HVLPIMGKD-------W------------AQNGVTRLFTKIKENGYKLLYLSARAIG  139 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG----~il~~lGkD-------w------------th~GVa~Ly~~i~~nGY~ilYLSaRpi~  139 (567)
                      -|+||||+||||+.+...-    +.+......       |            ..+|+.++.+.++++||++..+|+++..
T Consensus        37 ~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~~  116 (211)
T 2b82_A           37 PMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPT  116 (211)
T ss_dssp             CCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred             CCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence            5799999999999875311    000000000       1            2459999999999999999999999866


Q ss_pred             chHHHHHHHHhcccCCccCCCCceecCCCc-hhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhh
Q psy12533        140 QSRVTREYLQSVKQEDLTLPEGPMLLNPTS-LLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS  218 (567)
Q Consensus       140 ~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~-l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~a  218 (567)
                      +...+.+.|..     + |.  -+....+. .+.   .  ...+|+.|... ++.   +    ..  ..-+|++.+|+.+
T Consensus       117 ~~~~~l~~l~~-----~-f~--~i~~~~~~~~~~---~--~KP~p~~~~~~-~~~---~----g~--~l~VGDs~~Di~a  173 (211)
T 2b82_A          117 KTETVSKTLAD-----N-FH--IPATNMNPVIFA---G--DKPGQNTKSQW-LQD---K----NI--RIFYGDSDNDITA  173 (211)
T ss_dssp             SSCCHHHHHHH-----H-TT--CCTTTBCCCEEC---C--CCTTCCCSHHH-HHH---T----TE--EEEEESSHHHHHH
T ss_pred             HHHHHHHHHHH-----h-cC--ccccccchhhhc---C--CCCCHHHHHHH-HHH---C----CC--EEEEECCHHHHHH
Confidence            55444333332     0 11  01111100 000   0  12234334332 222   1    11  6678999999999


Q ss_pred             hhhcCCCC
Q psy12533        219 YQAVGIPL  226 (567)
Q Consensus       219 Y~~vGIp~  226 (567)
                      =+++|+..
T Consensus       174 A~~aG~~~  181 (211)
T 2b82_A          174 ARDVGARG  181 (211)
T ss_dssp             HHHTTCEE
T ss_pred             HHHCCCeE
Confidence            99999863

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=97.18  E-value=0.00054  Score=65.15  Aligned_cols=122  Identities=11%  Similarity=0.073  Sum_probs=71.9

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC---CCceecCCCchhhhhhhhhh-ccC--hhH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP---EGPMLLNPTSLLNAFHTEVI-EKK--PQE  460 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP---~GPvl~spd~l~~al~rEvi-~k~--p~~  460 (567)
                      ..+|+.++++.++++||++..+|+.+..   .++..|+.     .++.   ++.++.+         .++. ..+  |+.
T Consensus       111 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~-----~~l~~~f~~~i~~~---------~~~~~~~Kp~~~~  173 (259)
T 4eek_A          111 AIEGAAETLRALRAAGVPFAIGSNSERG---RLHLKLRV-----AGLTELAGEHIYDP---------SWVGGRGKPHPDL  173 (259)
T ss_dssp             ECTTHHHHHHHHHHHTCCEEEECSSCHH---HHHHHHHH-----TTCHHHHCSCEECG---------GGGTTCCTTSSHH
T ss_pred             cCccHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHh-----cChHhhccceEEeH---------hhcCcCCCCChHH
Confidence            4678999999999999999999997643   34555655     2322   1112211         1222 334  444


Q ss_pred             HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCc--------ccccccccccccHhhHHhhh
Q psy12533        461 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE--------VKHEMTQTFQSTYSNMSYLV  532 (567)
Q Consensus       461 fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~--------~~~~~~~~~~~sY~~l~~~v  532 (567)
                      |+.     +...+.-.... ...||+..+|+.+-+++|+.   ...|+..+.        +..........+...|.+++
T Consensus       174 ~~~-----~~~~lgi~~~~-~i~iGD~~~Di~~a~~aG~~---~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l  244 (259)
T 4eek_A          174 YTF-----AAQQLGILPER-CVVIEDSVTGGAAGLAAGAT---LWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAAL  244 (259)
T ss_dssp             HHH-----HHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE---EEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHH
T ss_pred             HHH-----HHHHcCCCHHH-EEEEcCCHHHHHHHHHCCCE---EEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHH
Confidence            443     33333322223 46899999999999999995   455654321        22221223456677777666


Q ss_pred             hh
Q psy12533        533 DQ  534 (567)
Q Consensus       533 d~  534 (567)
                      ..
T Consensus       245 ~~  246 (259)
T 4eek_A          245 AE  246 (259)
T ss_dssp             HH
T ss_pred             Hh
Confidence            54

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=97.18  E-value=0.0011  Score=61.85  Aligned_cols=100  Identities=13%  Similarity=0.045  Sum_probs=61.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.++...++++ |++..+|..+..   ..+..++.     .++.       .+..+++  -++...+|   |-+.+
T Consensus       117 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~---~~~~~l~~-----~~~~-------f~~~~~~--~~~~~~kp---~~~~~  175 (254)
T 3umg_A          117 PWPDSVPGLTAIKAE-YIIGPLSNGNTS---LLLDMAKN-----AGIP-------WDVIIGS--DINRKYKP---DPQAY  175 (254)
T ss_dssp             BCTTHHHHHHHHHHH-SEEEECSSSCHH---HHHHHHHH-----HTCC-------CSCCCCH--HHHTCCTT---SHHHH
T ss_pred             CCcCHHHHHHHHHhC-CeEEEEeCCCHH---HHHHHHHh-----CCCC-------eeEEEEc--CcCCCCCC---CHHHH
Confidence            468999999999997 999999986543   34555655     3332       1222211  22233444   22334


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRG  511 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g  511 (567)
                      +.+...++-.... ...||++.+|+.+=+++|+.   +..++..+
T Consensus       176 ~~~~~~lgi~~~~-~~~iGD~~~Di~~a~~aG~~---~~~~~~~~  216 (254)
T 3umg_A          176 LRTAQVLGLHPGE-VMLAAAHNGDLEAAHATGLA---TAFILRPV  216 (254)
T ss_dssp             HHHHHHTTCCGGG-EEEEESCHHHHHHHHHTTCE---EEEECCTT
T ss_pred             HHHHHHcCCChHH-EEEEeCChHhHHHHHHCCCE---EEEEecCC
Confidence            4444444322223 45799999999999999994   66777543

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=97.17  E-value=0.00059  Score=65.81  Aligned_cols=56  Identities=34%  Similarity=0.363  Sum_probs=46.9

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||..++.            .-+++.+..++++++|.+++.+|+|+.--......+|..
T Consensus         8 ~kli~~DlDGTLl~~~~------------~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~   63 (268)
T 3qgm_A            8 KKGYIIDIDGVIGKSVT------------PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRS   63 (268)
T ss_dssp             CSEEEEECBTTTEETTE------------ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHH
T ss_pred             CCEEEEcCcCcEECCCE------------eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHH
Confidence            57999999999998642            235789999999999999999999877776667777766

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=97.17  E-value=0.00041  Score=65.15  Aligned_cols=90  Identities=17%  Similarity=0.192  Sum_probs=55.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccC--hhHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKK--PQEFKI  188 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~--p~~fKi  188 (567)
                      .+|+.++...++++||++..+|+.+.   ..++..|+.     .++..  --++.+.         ++...+  |+.|+.
T Consensus        85 ~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~-----~gl~~~f~~i~~~~---------~~~~~Kp~~~~~~~  147 (222)
T 2nyv_A           85 YPEIPYTLEALKSKGFKLAVVSNKLE---ELSKKILDI-----LNLSGYFDLIVGGD---------TFGEKKPSPTPVLK  147 (222)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCH---HHHHHHHHH-----TTCGGGCSEEECTT---------SSCTTCCTTHHHHH
T ss_pred             CCCHHHHHHHHHHCCCeEEEEcCCCH---HHHHHHHHH-----cCCHHHheEEEecC---------cCCCCCCChHHHHH
Confidence            46899999999999999999999653   345566665     33321  1122222         222233  444433


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .+ +.+    .-...- ...+|++.+|+.+=+++|+.
T Consensus       148 ~~-~~~----~~~~~~-~~~vGD~~~Di~~a~~aG~~  178 (222)
T 2nyv_A          148 TL-EIL----GEEPEK-ALIVGDTDADIEAGKRAGTK  178 (222)
T ss_dssp             HH-HHH----TCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             HH-HHh----CCCchh-EEEECCCHHHHHHHHHCCCe
Confidence            32 222    111122 55788999999999999986

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=97.15  E-value=0.0012  Score=65.13  Aligned_cols=65  Identities=15%  Similarity=0.201  Sum_probs=47.8

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |+|+||+||||..++.          -| .+...+..++++++|++++.+|||+....   +.++..     .+++ +|+
T Consensus         5 kli~~DlDGTLl~~~~----------~i-~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~-~~~   64 (288)
T 1nrw_A            5 KLIAIDLDGTLLNSKH----------QV-SLENENALRQAQRDGIEVVVSTGRAHFDV---MSIFEP-----LGIK-TWV   64 (288)
T ss_dssp             CEEEEECCCCCSCTTS----------CC-CHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHGG-----GTCC-CEE
T ss_pred             EEEEEeCCCCCCCCCC----------cc-CHHHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----cCCC-CcE
Confidence            7899999999998851          22 34567788899999999999999987544   666655     3443 466


Q ss_pred             ecCCC
Q psy12533        439 LLNPT  443 (567)
Q Consensus       439 l~spd  443 (567)
                      ++...
T Consensus        65 I~~NG   69 (288)
T 1nrw_A           65 ISANG   69 (288)
T ss_dssp             EEGGG
T ss_pred             EEcCC
Confidence            65443

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=97.15  E-value=0.0029  Score=60.17  Aligned_cols=95  Identities=14%  Similarity=0.116  Sum_probs=53.7

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  467 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~  467 (567)
                      .+|+.+++..++++||++..+|+.+....   +..+..+.-.++ +....+  +.+..      .....+|+.|+..   
T Consensus       105 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~---~~~l~~~~~~~~-~~~~~~--~~~~~------~~~kp~~~~~~~~---  169 (267)
T 1swv_A          105 INGVKEVIASLRERGIKIGSTTGYTREMM---DIVAKEAALQGY-KPDFLV--TPDDV------PAGRPYPWMCYKN---  169 (267)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEBCSSCHHHH---HHHHHHHHHTTC-CCSCCB--CGGGS------SCCTTSSHHHHHH---
T ss_pred             CccHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHHcCCccc-ChHhee--cCCcc------CCCCCCHHHHHHH---
Confidence            46888888899999999999998765443   344443211111 112111  11110      0012344555432   


Q ss_pred             HHHhhCCCCC-CCEEEecCCCcccHHhHHHcCCC
Q psy12533        468 DIMALFPPNT-QPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       468 ~i~~lf~~~~-~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                        ...++-.. .. ...||+..+|+.+-+.+|+.
T Consensus       170 --~~~lgi~~~~~-~i~iGD~~nDi~~a~~aG~~  200 (267)
T 1swv_A          170 --AMELGVYPMNH-MIKVGDTVSDMKEGRNAGMW  200 (267)
T ss_dssp             --HHHHTCCSGGG-EEEEESSHHHHHHHHHTTSE
T ss_pred             --HHHhCCCCCcC-EEEEeCCHHHHHHHHHCCCE
Confidence              22222112 22 46899999999999999984

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=97.15  E-value=0.00093  Score=62.26  Aligned_cols=126  Identities=13%  Similarity=0.089  Sum_probs=66.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~--p~~fKi~~  190 (567)
                      .+|+.++...++++|+++..+|+.+....   +..|..  .-...+. +-.+.+.+        ++...+  |+.|+.. 
T Consensus       110 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~---~~~l~~--~l~~~f~-~~~~~~~~--------~~~~~kp~~~~~~~~-  174 (247)
T 3dv9_A          110 MPGALEVLTKIKSEGLTPMVVTGSGQTSL---LDRLNH--NFPGIFQ-ANLMVTAF--------DVKYGKPNPEPYLMA-  174 (247)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSCC---C---HHHHHH--HSTTTCC-GGGEECGG--------GCSSCTTSSHHHHHH-
T ss_pred             CCCHHHHHHHHHHcCCcEEEEcCCchHHH---HHHHHh--hHHHhcC-CCeEEecc--------cCCCCCCCCHHHHHH-
Confidence            46899999999999999999998765433   222322  0001111 00111111        222333  3434433 


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc----ccccccccHHhHHhhhhhcC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE----MTQTFQSTYSNMSYLVDQMF  261 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~----~~~~~~~sY~~l~~~vd~~f  261 (567)
                          ...+.-...- ...||++.+|+.+-+++|+..   ..++.......+    .......+...|.++++.++
T Consensus       175 ----~~~lg~~~~~-~i~vGD~~~Di~~a~~aG~~~---i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~  241 (247)
T 3dv9_A          175 ----LKKGGFKPNE-ALVIENAPLGVQAGVAAGIFT---IAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQ  241 (247)
T ss_dssp             ----HHHHTCCGGG-EEEEECSHHHHHHHHHTTSEE---EEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHHH
T ss_pred             ----HHHcCCChhh-eEEEeCCHHHHHHHHHCCCeE---EEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHHH
Confidence                3222211122 568999999999999999853   344442211111    22234567777777766553

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.15  E-value=0.00073  Score=66.02  Aligned_cols=66  Identities=14%  Similarity=0.240  Sum_probs=47.8

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-c
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-P  437 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-P  437 (567)
                      |+|+||+||||..++.  .         ..+...+..++ +++|.+++..|||+....   +.++..     .++ ++ |
T Consensus         3 kli~~DlDGTLl~~~~--~---------i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~---~~~~~~-----l~~-~~~~   61 (268)
T 1nf2_A            3 RVFVFDLDGTLLNDNL--E---------ISEKDRRNIEK-LSRKCYVVFASGRMLVST---LNVEKK-----YFK-RTFP   61 (268)
T ss_dssp             CEEEEECCCCCSCTTS--C---------CCHHHHHHHHH-HTTTSEEEEECSSCHHHH---HHHHHH-----HSS-SCCC
T ss_pred             cEEEEeCCCcCCCCCC--c---------cCHHHHHHHHH-HhCCCEEEEECCCChHHH---HHHHHH-----hCC-CCCe
Confidence            7899999999998751  1         23457788888 999999999999997554   566655     333 23 6


Q ss_pred             eecCCCch
Q psy12533        438 MLLNPTSL  445 (567)
Q Consensus       438 vl~spd~l  445 (567)
                      +++.....
T Consensus        62 ~I~~NGa~   69 (268)
T 1nf2_A           62 TIAYNGAI   69 (268)
T ss_dssp             EEEGGGTE
T ss_pred             EEEeCCeE
Confidence            66655443

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=97.13  E-value=0.00068  Score=62.07  Aligned_cols=95  Identities=20%  Similarity=0.207  Sum_probs=56.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~--p~~fKi~~  190 (567)
                      .+|+.+ .+.++++ |++..+|+++.   ..++..|+.     .++..  .   -+..+.+  .++...+  |+.|+. +
T Consensus        76 ~~~~~~-l~~l~~~-~~~~i~t~~~~---~~~~~~l~~-----~~l~~--~---f~~~~~~--~~~~~~Kp~~~~~~~-~  137 (201)
T 2w43_A           76 YEDTKY-LKEISEI-AEVYALSNGSI---NEVKQHLER-----NGLLR--Y---FKGIFSA--ESVKEYKPSPKVYKY-F  137 (201)
T ss_dssp             CGGGGG-HHHHHHH-SEEEEEESSCH---HHHHHHHHH-----TTCGG--G---CSEEEEG--GGGTCCTTCHHHHHH-H
T ss_pred             CCChHH-HHHHHhC-CeEEEEeCcCH---HHHHHHHHH-----CCcHH--h---CcEEEeh--hhcCCCCCCHHHHHH-H
Confidence            468888 9999999 99999999863   345566665     33321  0   0111111  1233344  444443 2


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  235 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  235 (567)
                      ++.+.   |.  .  ...+|++.+|+.+=+++|+..   ..++..
T Consensus       138 ~~~~~---~~--~--~~~vGD~~~Di~~a~~aG~~~---~~~~~~  172 (201)
T 2w43_A          138 LDSIG---AK--E--AFLVSSNAFDVIGAKNAGMRS---IFVNRK  172 (201)
T ss_dssp             HHHHT---CS--C--CEEEESCHHHHHHHHHTTCEE---EEECSS
T ss_pred             HHhcC---CC--c--EEEEeCCHHHhHHHHHCCCEE---EEECCC
Confidence            23332   22  2  346789999999999999853   445543

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=97.12  E-value=0.00051  Score=66.65  Aligned_cols=56  Identities=21%  Similarity=0.344  Sum_probs=44.6

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      -|+|+||+||||..++          +-+  +++.+..++++++|.+++.+|+|+.--......+|..
T Consensus         5 ~kli~~DlDGTLl~~~----------~~i--~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~   60 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGK----------SRI--PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRG   60 (264)
T ss_dssp             CCEEEECCBTTTEETT----------EEC--HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHT
T ss_pred             CCEEEEeCCCceEeCC----------EEC--cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            5899999999999884          222  6899999999999999999997665555555666654

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=97.12  E-value=0.001  Score=62.58  Aligned_cols=127  Identities=12%  Similarity=0.039  Sum_probs=66.6

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++...++++|+++..+|+.+....   +..|..  .-...++.--++.+.+ .      .....+|+.|+.   
T Consensus       110 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~---~~~l~~--~l~~~f~~d~i~~~~~-~------~~~kp~~~~~~~---  174 (243)
T 3qxg_A          110 RMPGAWELLQKVKSEGLTPMVVTGSGQLSL---LERLEH--NFPGMFHKELMVTAFD-V------KYGKPNPEPYLM---  174 (243)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECCCCCHHH---HTTHHH--HSTTTCCGGGEECTTT-C------SSCTTSSHHHHH---
T ss_pred             CCCCHHHHHHHHHHcCCcEEEEeCCcHHHH---HHHHHH--hHHHhcCcceEEeHHh-C------CCCCCChHHHHH---
Confidence            346888999999999999999998764322   222322  0001111001222211 1      012233434443   


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc----ccccccccHHhHHhhhhh
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE----MTQTFQSTYSNMSYLVDQ  259 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~----~~~~~~~sY~~l~~~vd~  259 (567)
                        +...+.-...- ...||++.+|+.+=+++|+..   ..++.......+    .......+...|.++++.
T Consensus       175 --~~~~lg~~~~~-~i~vGD~~~Di~~a~~aG~~~---i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~  240 (243)
T 3qxg_A          175 --ALKKGGLKADE-AVVIENAPLGVEAGHKAGIFT---IAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDT  240 (243)
T ss_dssp             --HHHHTTCCGGG-EEEEECSHHHHHHHHHTTCEE---EEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHH
T ss_pred             --HHHHcCCCHHH-eEEEeCCHHHHHHHHHCCCEE---EEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHh
Confidence              33333322222 568999999999999999853   344432222121    122245667777666554

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=97.12  E-value=0.00079  Score=61.41  Aligned_cols=92  Identities=17%  Similarity=0.179  Sum_probs=53.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~  190 (567)
                      .+|+.++...++++|+++..+|+.+..   ..+..++.     .++..  .-++.+.         ++...+|+   -+.
T Consensus        96 ~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~-----~~~~~~~~~~~~~~---------~~~~~kp~---~~~  155 (226)
T 1te2_A           96 LPGVREAVALCKEQGLLVGLASASPLH---MLEKVLTM-----FDLRDSFDALASAE---------KLPYSKPH---PQV  155 (226)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHH-----TTCGGGCSEEEECT---------TSSCCTTS---THH
T ss_pred             CccHHHHHHHHHHCCCcEEEEeCCcHH---HHHHHHHh-----cCcHhhCcEEEecc---------ccCCCCCC---hHH
Confidence            457888888899999999999987643   33455554     22210  1112111         12223332   223


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      ++.+...+.-.... ...||+..+|+.+-+.+|+.
T Consensus       156 ~~~~~~~~~i~~~~-~i~iGD~~nDi~~a~~aG~~  189 (226)
T 1te2_A          156 YLDCAAKLGVDPLT-CVALEDSVNGMIASKAARMR  189 (226)
T ss_dssp             HHHHHHHHTSCGGG-EEEEESSHHHHHHHHHTTCE
T ss_pred             HHHHHHHcCCCHHH-eEEEeCCHHHHHHHHHcCCE
Confidence            33333333211223 56899999999999999985

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.10  E-value=0.00062  Score=68.35  Aligned_cols=85  Identities=14%  Similarity=0.164  Sum_probs=55.6

Q ss_pred             CeEEEEecCCccccC-CcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH--HhcccCCccCC
Q psy12533        358 DKIVISDIDGTITKS-DVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL--QSVKQEDLTLP  434 (567)
Q Consensus       358 ~kiVIsDIDGTiTkS-D~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L--~~~~Q~~~~lP  434 (567)
                      -|+|+||+||||..+ +.           ...+...+..++++++|.+|+..|||+....   +.++  ..+.+  ...|
T Consensus        27 ikli~~DlDGTLl~~~~~-----------~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~---~~~~~~~~l~~--~~~~   90 (301)
T 2b30_A           27 IKLLLIDFDGTLFVDKDI-----------KVPSENIDAIKEAIEKGYMVSICTGRSKVGI---LSAFGEENLKK--MNFY   90 (301)
T ss_dssp             CCEEEEETBTTTBCCTTT-----------CSCHHHHHHHHHHHHHTCEEEEECSSCHHHH---HHHHCHHHHHH--HTCC
T ss_pred             ccEEEEECCCCCcCCCCC-----------ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHhhHHhhcc--cccC
Confidence            478999999999987 42           1346688899999999999999999996544   5666  55320  1112


Q ss_pred             CCceecCCCchhhhhhhhhhccCh
Q psy12533        435 EGPMLLNPTSLLNAFHTEVIEKKP  458 (567)
Q Consensus       435 ~GPvl~spd~l~~al~rEvi~k~p  458 (567)
                      ++|+++......--...+++...+
T Consensus        91 ~~~~I~~NGa~i~~~~~~~i~~~~  114 (301)
T 2b30_A           91 GMPGVYINGTIVYDQIGYTLLDET  114 (301)
T ss_dssp             SCSEEEGGGTEEECTTCCEEEECC
T ss_pred             CCeEEEcCCeEEEeCCCCEEEEcc
Confidence            356666554433111345554443

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=97.10  E-value=0.0013  Score=60.78  Aligned_cols=100  Identities=13%  Similarity=0.181  Sum_probs=59.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++...++++ |++..+|+.+.   ...+..|+.     .++..  .   .+..+.  ..++...+|   |-+.+
T Consensus       104 ~~~~~~~~l~~l~~~-~~~~i~t~~~~---~~~~~~l~~-----~~l~~--~---f~~~~~--~~~~~~~kp---~~~~~  164 (238)
T 3ed5_A          104 LIDGAFDLISNLQQQ-FDLYIVTNGVS---HTQYKRLRD-----SGLFP--F---FKDIFV--SEDTGFQKP---MKEYF  164 (238)
T ss_dssp             BCTTHHHHHHHHHTT-SEEEEEECSCH---HHHHHHHHH-----TTCGG--G---CSEEEE--GGGTTSCTT---CHHHH
T ss_pred             CCccHHHHHHHHHhc-CeEEEEeCCCH---HHHHHHHHH-----cChHh--h---hheEEE--ecccCCCCC---ChHHH
Confidence            456899999999999 99999998764   334555555     22221  0   011111  112233444   33444


Q ss_pred             HHHHHhCC-CCCCCEEEecCCcc-cchhhhhhcCCCCCCEEEEcC
Q psy12533        192 RDIMALFP-PNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINS  234 (567)
Q Consensus       192 ~~i~~lf~-~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~  234 (567)
                      ..+...++ -...- ...+|++. +|+.+=+++|+..   ..++.
T Consensus       165 ~~~~~~~g~~~~~~-~i~vGD~~~~Di~~a~~aG~~~---i~~~~  205 (238)
T 3ed5_A          165 NYVFERIPQFSAEH-TLIIGDSLTADIKGGQLAGLDT---CWMNP  205 (238)
T ss_dssp             HHHHHTSTTCCGGG-EEEEESCTTTTHHHHHHTTCEE---EEECT
T ss_pred             HHHHHHcCCCChhH-eEEECCCcHHHHHHHHHCCCEE---EEECC
Confidence            45555443 22223 56899997 9999999999843   34554

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=97.08  E-value=0.00073  Score=64.59  Aligned_cols=53  Identities=17%  Similarity=0.228  Sum_probs=41.8

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      |+|+||+||||+.++.           .-.+...+..++++++|.+|+.+|+|+....   +.++..
T Consensus         4 kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~---~~~~~~   56 (231)
T 1wr8_A            4 KAISIDIDGTITYPNR-----------MIHEKALEAIRRAESLGIPIMLVTGNTVQFA---EAASIL   56 (231)
T ss_dssp             CEEEEESTTTTBCTTS-----------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHH---HHHHHH
T ss_pred             eEEEEECCCCCCCCCC-----------cCCHHHHHHHHHHHHCCCEEEEEcCCChhHH---HHHHHH
Confidence            7899999999998852           1235678888999999999999999987654   444444

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.08  E-value=0.00075  Score=65.47  Aligned_cols=64  Identities=17%  Similarity=0.416  Sum_probs=45.9

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |+|+||+||||+ ++.          .. .. ..+..++++++|++++.+|||+....   +.++..     .+++ .|+
T Consensus         3 kli~~DlDGTLl-~~~----------~~-~~-~~~~l~~l~~~g~~~~i~Tgr~~~~~---~~~~~~-----~~~~-~~~   60 (249)
T 2zos_A            3 RLIFLDIDKTLI-PGY----------EP-DP-AKPIIEELKDMGFEIIFNSSKTRAEQ---EYYRKE-----LEVE-TPF   60 (249)
T ss_dssp             EEEEECCSTTTC-TTS----------CS-GG-GHHHHHHHHHTTEEEEEBCSSCHHHH---HHHHHH-----HTCC-SCE
T ss_pred             cEEEEeCCCCcc-CCC----------Cc-HH-HHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----cCCC-ccE
Confidence            789999999999 641          11 12 77888999999999999999987654   556655     3443 256


Q ss_pred             ecCCCc
Q psy12533        439 LLNPTS  444 (567)
Q Consensus       439 l~spd~  444 (567)
                      ++....
T Consensus        61 I~~NGa   66 (249)
T 2zos_A           61 ISENGS   66 (249)
T ss_dssp             EETTTT
T ss_pred             EEeCCe
Confidence            655443

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=97.08  E-value=0.00088  Score=64.64  Aligned_cols=125  Identities=17%  Similarity=0.147  Sum_probs=73.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~  189 (567)
                      ..+|+.++...++++||++..+|+.+..    .+..|+.     .++..  .   -+..+.  ..++...+|  +.|+..
T Consensus       107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~----~~~~l~~-----~gl~~--~---f~~~~~--~~~~~~~Kp~~~~~~~~  170 (263)
T 3k1z_A          107 VLDGAEDTLRECRTRGLRLAVISNFDRR----LEGILGG-----LGLRE--H---FDFVLT--SEAAGWPKPDPRIFQEA  170 (263)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESCCTT----HHHHHHH-----TTCGG--G---CSCEEE--HHHHSSCTTSHHHHHHH
T ss_pred             ECcCHHHHHHHHHhCCCcEEEEeCCcHH----HHHHHHh-----CCcHH--h---hhEEEe--ecccCCCCCCHHHHHHH
Confidence            4568899999999999999999986542    3666666     33321  0   111211  123334455  334333


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCCCCEEEEcCCCceecc-----ccccccccHHhHHhhhhhcC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRGEVKHE-----MTQTFQSTYSNMSYLVDQMF  261 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g~~~~~-----~~~~~~~sY~~l~~~vd~~f  261 (567)
                      + +.+ .+ +  ..- ...+|++. +|+.+=+++|+.   +..++..+....+     .......+...|.+++..+.
T Consensus       171 ~-~~~-g~-~--~~~-~~~vGD~~~~Di~~a~~aG~~---~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~~~  239 (263)
T 3k1z_A          171 L-RLA-HM-E--PVV-AAHVGDNYLCDYQGPRAVGMH---SFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDCLE  239 (263)
T ss_dssp             H-HHH-TC-C--GGG-EEEEESCHHHHTHHHHTTTCE---EEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHHHH
T ss_pred             H-HHc-CC-C--HHH-EEEECCCcHHHHHHHHHCCCE---EEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHHHH
Confidence            2 222 11 1  122 56799996 999999999986   5566665443321     12234566777777776654

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=97.08  E-value=0.00066  Score=61.00  Aligned_cols=96  Identities=18%  Similarity=0.256  Sum_probs=58.9

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhcc--ChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEK--KPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k--~p~~fK~~  464 (567)
                      ..+|+.++++.++++|+++..+|+.+.    .++.+|..     .++..  .+   +..+.  ..++...  +|+.|+  
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~----~~~~~l~~-----~~~~~--~f---~~~~~--~~~~~~~kp~~~~~~--  144 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRND----QVLEILEK-----TSIAA--YF---TEVVT--SSSGFKRKPNPESML--  144 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCT----HHHHHHHH-----TTCGG--GE---EEEEC--GGGCCCCTTSCHHHH--
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCcH----HHHHHHHH-----cCCHh--he---eeeee--ccccCCCCCCHHHHH--
Confidence            457899999999999999999998763    35666665     33321  00   11111  1122223  344443  


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS  509 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~  509 (567)
                         .+...++-.  . ...||+..+|+.+-+++|+.   +..++.
T Consensus       145 ---~~~~~~~~~--~-~~~iGD~~~Di~~a~~aG~~---~~~~~~  180 (190)
T 2fi1_A          145 ---YLREKYQIS--S-GLVIGDRPIDIEAGQAAGLD---THLFTS  180 (190)
T ss_dssp             ---HHHHHTTCS--S-EEEEESSHHHHHHHHHTTCE---EEECSC
T ss_pred             ---HHHHHcCCC--e-EEEEcCCHHHHHHHHHcCCe---EEEECC
Confidence               333333333  2 46899999999999999985   344444

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.07  E-value=0.0006  Score=67.23  Aligned_cols=68  Identities=19%  Similarity=0.275  Sum_probs=48.2

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  161 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G  161 (567)
                      .-|+|+||+||||+.++.  ++         .+...+..++++++|++|+.+|+|+...   .+.++..     .+++..
T Consensus         8 ~~~li~~DlDGTLl~~~~--~~---------~~~~~~~l~~l~~~G~~~~iaTGR~~~~---~~~~~~~-----l~~~~~   68 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDSHS--YD---------WQPAAPWLTRLREANVPVILCSSKTSAE---MLYLQKT-----LGLQGL   68 (275)
T ss_dssp             CCEEEEEECTTTTSCSSC--CS---------CCTTHHHHHHHHHTTCCEEEECSSCHHH---HHHHHHH-----TTCTTS
T ss_pred             CceEEEEeCCCCCCCCCC--cC---------CHHHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHH-----cCCCCC
Confidence            357999999999998742  11         1235788889999999999999998754   4667766     334322


Q ss_pred             ceecCCC
Q psy12533        162 PMLLNPT  168 (567)
Q Consensus       162 Plllsp~  168 (567)
                      |+++...
T Consensus        69 ~~I~~NG   75 (275)
T 1xvi_A           69 PLIAENG   75 (275)
T ss_dssp             CEEEGGG
T ss_pred             eEEEeCC
Confidence            6665543

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=97.06  E-value=0.00059  Score=65.88  Aligned_cols=56  Identities=18%  Similarity=0.286  Sum_probs=44.5

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      -|+|+||+||||..++.            .-+++.+..++++++|.+++.+|+|+.-.....+.+|..
T Consensus         6 ~kli~~DlDGTLl~~~~------------~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~   61 (266)
T 3pdw_A            6 YKGYLIDLDGTMYNGTE------------KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS   61 (266)
T ss_dssp             CSEEEEECSSSTTCHHH------------HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHH
T ss_pred             CCEEEEeCcCceEeCCE------------eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            58899999999997621            235789999999999999999999776655555666654

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=97.06  E-value=0.00067  Score=62.71  Aligned_cols=126  Identities=13%  Similarity=0.193  Sum_probs=68.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++.+.++++ |++..+|+.+.   ..++..|+.     .++..  .   -+..+.+  -++...+|+.   +.+
T Consensus       101 ~~~~~~~~l~~l~~~-~~~~i~t~~~~---~~~~~~l~~-----~~~~~--~---f~~~~~~--~~~~~~kp~~---~~~  161 (234)
T 3u26_A          101 LYPEVVEVLKSLKGK-YHVGMITDSDT---EQAMAFLDA-----LGIKD--L---FDSITTS--EEAGFFKPHP---RIF  161 (234)
T ss_dssp             BCTTHHHHHHHHTTT-SEEEEEESSCH---HHHHHHHHH-----TTCGG--G---CSEEEEH--HHHTBCTTSH---HHH
T ss_pred             cCcCHHHHHHHHHhC-CcEEEEECCCH---HHHHHHHHH-----cCcHH--H---cceeEec--cccCCCCcCH---HHH
Confidence            346888999999999 99999999765   334555655     22221  0   1112211  1233345532   223


Q ss_pred             HHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCCCCEEEEcCCCceecc--ccccccccHHhHHhhhhhc
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRGEVKHE--MTQTFQSTYSNMSYLVDQM  260 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g~~~~~--~~~~~~~sY~~l~~~vd~~  260 (567)
                      +.+...+.-.... ...||++. +|+.+=+++|+.   ...|+..+.....  .......+...|.++++.+
T Consensus       162 ~~~~~~~~~~~~~-~~~vGD~~~~Di~~a~~aG~~---~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~~  229 (234)
T 3u26_A          162 ELALKKAGVKGEE-AVYVGDNPVKDCGGSKNLGMT---SILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL  229 (234)
T ss_dssp             HHHHHHHTCCGGG-EEEEESCTTTTHHHHHTTTCE---EEEECSSSTTGGGGGGCSEEESSTHHHHHHHHHH
T ss_pred             HHHHHHcCCCchh-EEEEcCCcHHHHHHHHHcCCE---EEEECCCCCccccccCCCEeeCCHHHHHHHHHHH
Confidence            3333332211222 56899997 999999999984   3445443222111  1122345666666666543

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=97.05  E-value=0.00067  Score=65.79  Aligned_cols=56  Identities=21%  Similarity=0.344  Sum_probs=46.2

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||..++          +-+  +++.+..++++++|.+++.+|+|+.-.......+|..
T Consensus         5 ~kli~~DlDGTLl~~~----------~~i--~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~   60 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGK----------SRI--PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRG   60 (264)
T ss_dssp             CCEEEECCBTTTEETT----------EEC--HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHT
T ss_pred             CCEEEEeCCCceEeCC----------EEC--cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            5799999999999884          222  6899999999999999999997776666666777776

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.05  E-value=0.00094  Score=65.86  Aligned_cols=71  Identities=18%  Similarity=0.324  Sum_probs=50.0

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      -|+|+||+||||+.++.  .         ..+...+..++++++|.+|+.+|||+....   +.+++.+   +...|.+|
T Consensus         5 ~kli~~DlDGTLl~~~~--~---------i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~---~~~~~~l---~l~~~~~~   67 (282)
T 1rkq_A            5 IKLIAIDMDGTLLLPDH--T---------ISPAVKNAIAAARARGVNVVLTTGRPYAGV---HNYLKEL---HMEQPGDY   67 (282)
T ss_dssp             CCEEEECCCCCCSCTTS--C---------CCHHHHHHHHHHHHTTCEEEEECSSCGGGT---HHHHHHT---TCCSTTCE
T ss_pred             ceEEEEeCCCCCCCCCC--c---------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHHh---CCCCCCCe
Confidence            37999999999998852  1         234577888999999999999999997655   5566552   11223346


Q ss_pred             eecCCCch
Q psy12533        163 MLLNPTSL  170 (567)
Q Consensus       163 lllsp~~l  170 (567)
                      +++.....
T Consensus        68 ~I~~NGa~   75 (282)
T 1rkq_A           68 CITYNGAL   75 (282)
T ss_dssp             EEEGGGTE
T ss_pred             EEEeCCeE
Confidence            66654433

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=97.04  E-value=0.0012  Score=62.02  Aligned_cols=97  Identities=19%  Similarity=0.088  Sum_probs=57.1

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      .+|+.++...++++ |++..+|..+.   ...+..|+.     .++.       .+..+.+  .++...+|   |-+.++
T Consensus       122 ~~~~~~~l~~l~~~-~~~~i~s~~~~---~~~~~~l~~-----~g~~-------f~~~~~~--~~~~~~kp---~~~~~~  180 (254)
T 3umc_A          122 WPDTLAGMHALKAD-YWLAALSNGNT---ALMLDVARH-----AGLP-------WDMLLCA--DLFGHYKP---DPQVYL  180 (254)
T ss_dssp             CTTHHHHHHHHTTT-SEEEECCSSCH---HHHHHHHHH-----HTCC-------CSEECCH--HHHTCCTT---SHHHHH
T ss_pred             CccHHHHHHHHHhc-CeEEEEeCCCH---HHHHHHHHH-----cCCC-------cceEEee--cccccCCC---CHHHHH
Confidence            46888888888875 99998988654   334555655     3332       1222221  12333444   333333


Q ss_pred             HHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcC
Q psy12533        193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS  234 (567)
Q Consensus       193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~  234 (567)
                      .+...+.-...- ...||+..+|+.+=+++|+.   +..+|.
T Consensus       181 ~~~~~lgi~~~~-~~~iGD~~~Di~~a~~aG~~---~~~~~~  218 (254)
T 3umc_A          181 GACRLLDLPPQE-VMLCAAHNYDLKAARALGLK---TAFIAR  218 (254)
T ss_dssp             HHHHHHTCCGGG-EEEEESCHHHHHHHHHTTCE---EEEECC
T ss_pred             HHHHHcCCChHH-EEEEcCchHhHHHHHHCCCe---EEEEec
Confidence            333333211122 55788889999999999994   456664

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.04  E-value=0.00066  Score=62.09  Aligned_cols=90  Identities=18%  Similarity=0.217  Sum_probs=54.1

Q ss_pred             cchhHHHHHHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nG-Y~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      ..+|+.++...++++| |++..+|..+...   .+..+..     .++.+     ..+..+.+     -.++|+.|+.. 
T Consensus       106 ~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~---~~~~l~~-----~~~~~-----~f~~~~~~-----~kpk~~~~~~~-  166 (234)
T 3ddh_A          106 LLPGVKETLKTLKETGKYKLVVATKGDLLD---QENKLER-----SGLSP-----YFDHIEVM-----SDKTEKEYLRL-  166 (234)
T ss_dssp             BCTTHHHHHHHHHHHCCCEEEEEEESCHHH---HHHHHHH-----HTCGG-----GCSEEEEE-----SCCSHHHHHHH-
T ss_pred             cCccHHHHHHHHHhCCCeEEEEEeCCchHH---HHHHHHH-----hCcHh-----hhheeeec-----CCCCHHHHHHH-
Confidence            4678999999999999 9999999765433   3444544     22210     00111110     12345555443 


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIP  500 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp  500 (567)
                          ...++-...- ...||+.. +|+.+=+++|+.
T Consensus       167 ----~~~lgi~~~~-~i~iGD~~~~Di~~a~~aG~~  197 (234)
T 3ddh_A          167 ----LSILQIAPSE-LLMVGNSFKSDIQPVLSLGGY  197 (234)
T ss_dssp             ----HHHHTCCGGG-EEEEESCCCCCCHHHHHHTCE
T ss_pred             ----HHHhCCCcce-EEEECCCcHHHhHHHHHCCCe
Confidence                3322222222 46899996 999999999985

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=97.03  E-value=0.00074  Score=65.58  Aligned_cols=55  Identities=27%  Similarity=0.432  Sum_probs=44.8

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      |+|+||+||||+.++.            ..+++.+..++++++|.+++++|+|+........+.|..
T Consensus         2 k~i~~D~DGtL~~~~~------------~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~   56 (263)
T 1zjj_A            2 VAIIFDMDGVLYRGNR------------AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLK   56 (263)
T ss_dssp             EEEEEECBTTTEETTE------------ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHT
T ss_pred             eEEEEeCcCceEeCCE------------eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            6899999999997531            125788999999999999999999998777666666654

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=97.01  E-value=0.00025  Score=74.14  Aligned_cols=111  Identities=17%  Similarity=0.228  Sum_probs=66.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC----CCchhh-hhhhhhhccChhHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN----PTSLLN-AFHTEVIEKKPQEF  461 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~s----pd~l~~-al~rEvi~k~p~~f  461 (567)
                      ..||+.++.+.++++||++.-+|+.+.   ..++..++.     .++.  .++.+    .++.++ -+..++...+|   
T Consensus       257 ~~pg~~e~l~~Lk~~G~~~~ivS~~~~---~~~~~~~~~-----lgl~--~~~~~~l~~~dg~~tg~~~~~v~~~kp---  323 (415)
T 3p96_A          257 LMPGARTTLRTLRRLGYACGVVSGGFR---RIIEPLAEE-----LMLD--YVAANELEIVDGTLTGRVVGPIIDRAG---  323 (415)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHH-----TTCS--EEEEECEEEETTEEEEEECSSCCCHHH---
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcH---HHHHHHHHH-----cCcc--ceeeeeEEEeCCEEEeeEccCCCCCcc---
Confidence            578999999999999999999999544   344555555     3442  11110    111111 01112222334   


Q ss_pred             HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533        462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  515 (567)
Q Consensus       462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  515 (567)
                      |.+.++.+...++-.... ...+|+..+|+.+-+++|+.    +.+|++-+++.
T Consensus       324 k~~~~~~~~~~~gi~~~~-~i~vGD~~~Di~~a~~aG~~----va~~~~~~~~~  372 (415)
T 3p96_A          324 KATALREFAQRAGVPMAQ-TVAVGDGANDIDMLAAAGLG----IAFNAKPALRE  372 (415)
T ss_dssp             HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE----EEESCCHHHHH
T ss_pred             hHHHHHHHHHHcCcChhh-EEEEECCHHHHHHHHHCCCe----EEECCCHHHHH
Confidence            555666655544322222 45899999999999999984    23477655543

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=97.00  E-value=0.0011  Score=63.27  Aligned_cols=97  Identities=10%  Similarity=0.070  Sum_probs=57.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++++.++  ||++..+|+.+...   ++..|+.     .++..     ..+..+.  ..++-..+|  +.|+..
T Consensus        94 ~~~~~~~~l~~l~--g~~~~i~t~~~~~~---~~~~l~~-----~gl~~-----~f~~~~~--~~~~~~~Kp~~~~~~~~  156 (253)
T 1qq5_A           94 PYPDAAQCLAELA--PLKRAILSNGAPDM---LQALVAN-----AGLTD-----SFDAVIS--VDAKRVFKPHPDSYALV  156 (253)
T ss_dssp             BCTTHHHHHHHHT--TSEEEEEESSCHHH---HHHHHHH-----TTCGG-----GCSEEEE--GGGGTCCTTSHHHHHHH
T ss_pred             CCccHHHHHHHHc--CCCEEEEeCcCHHH---HHHHHHH-----CCchh-----hccEEEE--ccccCCCCCCHHHHHHH
Confidence            3589999999998  99999999986543   3555655     33221     0122221  112223344  455543


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS  509 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~  509 (567)
                      + +.+    +-...- ...||++.+|+.+=+++|+.   ...++.
T Consensus       157 ~-~~~----~~~~~~-~~~vGD~~~Di~~a~~aG~~---~~~~~~  192 (253)
T 1qq5_A          157 E-EVL----GVTPAE-VLFVSSNGFDVGGAKNFGFS---VARVAR  192 (253)
T ss_dssp             H-HHH----CCCGGG-EEEEESCHHHHHHHHHHTCE---EEEECC
T ss_pred             H-HHc----CCCHHH-EEEEeCChhhHHHHHHCCCE---EEEECC
Confidence            2 222    111122 34678999999999999996   445555

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=96.99  E-value=0.00046  Score=62.62  Aligned_cols=98  Identities=16%  Similarity=0.182  Sum_probs=56.2

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec----CCCchhhhhhhhhhcc-ChhHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL----NPTSLLNAFHTEVIEK-KPQEFKI  188 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlll----sp~~l~~al~REvi~k-~p~~fKi  188 (567)
                      +|+.++.+.++++|+++..+|+|+....   +.+++.     .++..  ++.    ..+..   +..++... .+..-|.
T Consensus        79 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~---~~~~~~-----~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~K~  145 (211)
T 1l7m_A           79 EGAEETIKELKNRGYVVAVVSGGFDIAV---NKIKEK-----LGLDY--AFANRLIVKDGK---LTGDVEGEVLKENAKG  145 (211)
T ss_dssp             TTHHHHHHHHHHTTEEEEEEEEEEHHHH---HHHHHH-----HTCSE--EEEEEEEEETTE---EEEEEECSSCSTTHHH
T ss_pred             ccHHHHHHHHHHCCCEEEEEcCCcHHHH---HHHHHH-----cCCCe--EEEeeeEEECCE---EcCCcccCccCCccHH
Confidence            5888899999999999999999986544   445544     22210  110    00000   00011000 0112355


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      +.+..+...+.-...- ..+||+..+|+.+-+.+|+.
T Consensus       146 ~~l~~~~~~lgi~~~~-~~~iGD~~~Di~~~~~ag~~  181 (211)
T 1l7m_A          146 EILEKIAKIEGINLED-TVAVGDGANDISMFKKAGLK  181 (211)
T ss_dssp             HHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHCSEE
T ss_pred             HHHHHHHHHcCCCHHH-EEEEecChhHHHHHHHCCCE
Confidence            5566655544321122 67899999999999999984

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=96.98  E-value=0.0007  Score=60.81  Aligned_cols=92  Identities=18%  Similarity=0.265  Sum_probs=56.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++.+.++++|+++..+|+.+.    .++.+|+.     .++..  .+   +..+.+  .++...+|   |-+.+
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~----~~~~~l~~-----~~~~~--~f---~~~~~~--~~~~~~kp---~~~~~  143 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRND----QVLEILEK-----TSIAA--YF---TEVVTS--SSGFKRKP---NPESM  143 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCT----HHHHHHHH-----TTCGG--GE---EEEECG--GGCCCCTT---SCHHH
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCcH----HHHHHHHH-----cCCHh--he---eeeeec--cccCCCCC---CHHHH
Confidence            356899999999999999999998763    35566665     23221  00   111110  12222333   23333


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      ..+...+.-.  - ...||+..+|+.+-+.+|+.
T Consensus       144 ~~~~~~~~~~--~-~~~iGD~~~Di~~a~~aG~~  174 (190)
T 2fi1_A          144 LYLREKYQIS--S-GLVIGDRPIDIEAGQAAGLD  174 (190)
T ss_dssp             HHHHHHTTCS--S-EEEEESSHHHHHHHHHTTCE
T ss_pred             HHHHHHcCCC--e-EEEEcCCHHHHHHHHHcCCe
Confidence            4444444332  2 56899999999999999985

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=96.98  E-value=0.0015  Score=60.18  Aligned_cols=125  Identities=14%  Similarity=0.085  Sum_probs=68.8

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhH-HHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQE-FKISC  190 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~-fKi~~  190 (567)
                      ..+|+.++...+++ ||++..+|+.+...   .+..++.+.   ..         .+..+.  ..++...+|+. +...+
T Consensus       100 ~~~~~~~~l~~l~~-~~~~~i~tn~~~~~---~~~~l~~l~---~~---------fd~i~~--~~~~~~~KP~~~~~~~~  161 (240)
T 3smv_A          100 AFPDTVEALQYLKK-HYKLVILSNIDRNE---FKLSNAKLG---VE---------FDHIIT--AQDVGSYKPNPNNFTYM  161 (240)
T ss_dssp             BCTTHHHHHHHHHH-HSEEEEEESSCHHH---HHHHHTTTC---SC---------CSEEEE--HHHHTSCTTSHHHHHHH
T ss_pred             CCCcHHHHHHHHHh-CCeEEEEeCCChhH---HHHHHHhcC---Cc---------cCEEEE--ccccCCCCCCHHHHHHH
Confidence            45699999999999 89999999876433   233343311   11         122222  12455556644 22233


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCCCCEEEEcCC------Cce----eccccccccccHHhHHhhhhh
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSR------GEV----KHEMTQTFQSTYSNMSYLVDQ  259 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~------g~~----~~~~~~~~~~sY~~l~~~vd~  259 (567)
                      ++. ...+.-...- ...+|++. +|+.+=+++|+.   +..+|..      |..    ..........+...|.+++..
T Consensus       162 l~~-~~~lgi~~~~-~~~vGD~~~~Di~~a~~aG~~---~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l~~  236 (240)
T 3smv_A          162 IDA-LAKAGIEKKD-ILHTAESLYHDHIPANDAGLV---SAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAHKQ  236 (240)
T ss_dssp             HHH-HHHTTCCGGG-EEEEESCTTTTHHHHHHHTCE---EEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHHHH
T ss_pred             HHH-HHhcCCCchh-EEEECCCchhhhHHHHHcCCe---EEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHHHH
Confidence            333 3222221222 55799995 999999999984   4466654      222    112222245666666665543

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=96.98  E-value=0.0012  Score=63.28  Aligned_cols=82  Identities=18%  Similarity=0.207  Sum_probs=56.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++...++++|+++.-+|+++...+   +..++.     .++.         ..|.    +++.    .-|...+
T Consensus       145 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~---~~~~~~-----~gl~---------~~f~----~~~~----~~k~~~~  199 (280)
T 3skx_A          145 IRPESREAISKLKAIGIKCMMLTGDNRFVA---KWVAEE-----LGLD---------DYFA----EVLP----HEKAEKV  199 (280)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH-----HTCS---------EEEC----SCCG----GGHHHHH
T ss_pred             CCHhHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----cCCh---------hHhH----hcCH----HHHHHHH
Confidence            457999999999999999999999875443   455555     3332         1111    1111    1266666


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  224 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  224 (567)
                      +.+...+     - ...||+..+|+.+-+++|+
T Consensus       200 k~~~~~~-----~-~~~vGD~~nDi~~~~~Ag~  226 (280)
T 3skx_A          200 KEVQQKY-----V-TAMVGDGVNDAPALAQADV  226 (280)
T ss_dssp             HHHHTTS-----C-EEEEECTTTTHHHHHHSSE
T ss_pred             HHHHhcC-----C-EEEEeCCchhHHHHHhCCc
Confidence            6666653     1 4789999999999999996

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=96.96  E-value=0.00079  Score=64.96  Aligned_cols=56  Identities=18%  Similarity=0.299  Sum_probs=45.8

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||..++   +         .-+++.+..++++++|.+++.+|+|+.-.......+|..
T Consensus         6 ~kli~~DlDGTLl~~~---~---------~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~   61 (266)
T 3pdw_A            6 YKGYLIDLDGTMYNGT---E---------KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS   61 (266)
T ss_dssp             CSEEEEECSSSTTCHH---H---------HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHH
T ss_pred             CCEEEEeCcCceEeCC---E---------eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            5799999999999762   1         235788999999999999999999877666667777776

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=96.96  E-value=0.00065  Score=61.86  Aligned_cols=104  Identities=12%  Similarity=0.207  Sum_probs=57.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++.+.++++|+++..+|+.+..........+..+..   .+         +..+.+  .++...+|  +.|+..
T Consensus        92 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~---~f---------~~~~~~--~~~~~~Kp~~~~~~~~  157 (206)
T 2b0c_A           92 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRD---AA---------DHIYLS--QDLGMRKPEARIYQHV  157 (206)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHH---HC---------SEEEEH--HHHTCCTTCHHHHHHH
T ss_pred             cCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhh---he---------eeEEEe--cccCCCCCCHHHHHHH
Confidence            467999999999999999999998765443211110000000   01         112211  12223344  455432


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  513 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  513 (567)
                       ++.+.    -.... ...+|++.+|+.+=+++|+.   ...++...++
T Consensus       158 -~~~~~----~~~~~-~~~vgD~~~Di~~a~~aG~~---~~~~~~~~~~  197 (206)
T 2b0c_A          158 -LQAEG----FSPSD-TVFFDDNADNIEGANQLGIT---SILVKDKTTI  197 (206)
T ss_dssp             -HHHHT----CCGGG-EEEEESCHHHHHHHHTTTCE---EEECCSTTHH
T ss_pred             -HHHcC----CCHHH-eEEeCCCHHHHHHHHHcCCe---EEEecCCchH
Confidence             33331    11222 35789999999999999996   3444554333

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=96.95  E-value=0.00091  Score=62.53  Aligned_cols=119  Identities=13%  Similarity=0.181  Sum_probs=68.7

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~~~  465 (567)
                      .+|+.++.+.++++||++..+|+.+.    .++..|+.     .++..    . -+..+.  ..++.  .++|+.|...+
T Consensus        97 ~~~~~~~l~~l~~~g~~~~i~Tn~~~----~~~~~l~~-----~gl~~----~-f~~~~~--~~~~~~~Kp~~~~~~~~~  160 (220)
T 2zg6_A           97 YDDTLEFLEGLKSNGYKLALVSNASP----RVKTLLEK-----FDLKK----Y-FDALAL--SYEIKAVKPNPKIFGFAL  160 (220)
T ss_dssp             CTTHHHHHHHHHTTTCEEEECCSCHH----HHHHHHHH-----HTCGG----G-CSEEC-------------CCHHHHHH
T ss_pred             CcCHHHHHHHHHHCCCEEEEEeCCcH----HHHHHHHh-----cCcHh----H-eeEEEe--ccccCCCCCCHHHHHHHH
Confidence            57999999999999999999999753    25667766     34321    0 111211  11222  23445665443


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcc-cHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhhHHhhhhhcC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVN-DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMF  536 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~t-Dv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~F  536 (567)
                       +.+      +..|  ..+|++.+ |+.+=+++|+.   ...++..|.- .+. .....+...|.+++..++
T Consensus       161 -~~~------~~~~--~~vgD~~~~Di~~a~~aG~~---~i~v~~~~~~-~~~-~~~i~~l~el~~~l~~~~  218 (220)
T 2zg6_A          161 -AKV------GYPA--VHVGDIYELDYIGAKRSYVD---PILLDRYDFY-PDV-RDRVKNLREALQKIEEMN  218 (220)
T ss_dssp             -HHH------CSSE--EEEESSCCCCCCCSSSCSEE---EEEBCTTSCC-TTC-CSCBSSHHHHHHHHHHHC
T ss_pred             -HHc------CCCe--EEEcCCchHhHHHHHHCCCe---EEEECCCCCC-CCc-ceEECCHHHHHHHHHHhc
Confidence             322      2334  68999998 99999999986   3444543321 121 223466666666666554

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=96.93  E-value=0.0022  Score=59.23  Aligned_cols=117  Identities=13%  Similarity=0.145  Sum_probs=64.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++.+.++++ |++.-+|+.+..        |..     .++..     ..+..+.  ..++...+|  +.|+..
T Consensus       106 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~--------l~~-----~~l~~-----~f~~~~~--~~~~~~~kp~~~~~~~~  164 (230)
T 3vay_A          106 IFPEVQPTLEILAKT-FTLGVITNGNAD--------VRR-----LGLAD-----YFAFALC--AEDLGIGKPDPAPFLEA  164 (230)
T ss_dssp             BCTTHHHHHHHHHTT-SEEEEEESSCCC--------GGG-----STTGG-----GCSEEEE--HHHHTCCTTSHHHHHHH
T ss_pred             cCcCHHHHHHHHHhC-CeEEEEECCchh--------hhh-----cCcHH-----HeeeeEE--ccccCCCCcCHHHHHHH
Confidence            567899999999988 999999987643        222     22221     0111211  112223344  444433


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCCCCEEEEcCCCccccc--ccccccccHhhHHhhhh
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRGEVKHE--MTQTFQSTYSNMSYLVD  533 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g~~~~~--~~~~~~~sY~~l~~~vd  533 (567)
                           ...++-...- ...+|++. +|+.+=+++|+.   ...|+..+.-...  .......+...|.++++
T Consensus       165 -----~~~~~~~~~~-~~~vGD~~~~Di~~a~~aG~~---~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~  227 (230)
T 3vay_A          165 -----LRRAKVDASA-AVHVGDHPSDDIAGAQQAGMR---AIWYNPQGKAWDADRLPDAEIHNLSQLPEVLA  227 (230)
T ss_dssp             -----HHHHTCCGGG-EEEEESCTTTTHHHHHHTTCE---EEEECTTCCCCCSSSCCSEEESSGGGHHHHHH
T ss_pred             -----HHHhCCCchh-eEEEeCChHHHHHHHHHCCCE---EEEEcCCCCCCcccCCCCeeECCHHHHHHHHH
Confidence                 2222212222 45899997 999999999996   4455654432221  11123456666666554

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=96.92  E-value=0.00059  Score=64.53  Aligned_cols=95  Identities=17%  Similarity=0.243  Sum_probs=54.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC-ccCCCCceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED-LTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKI  463 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~-~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~  463 (567)
                      ..+|+.+++..++++||++..+|+.+....   +..|...  .| ..+-+ -++.+.+       .++...+|  +.|+ 
T Consensus       113 ~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~---~~~l~~~--~~l~~~f~-~~~~~~~-------~~~~~~Kp~~~~~~-  178 (250)
T 3l5k_A          113 LMPGAEKLIIHLRKHGIPFALATSSRSASF---DMKTSRH--KEFFSLFS-HIVLGDD-------PEVQHGKPDPDIFL-  178 (250)
T ss_dssp             BCTTHHHHHHHHHHTTCCEEEECSCCHHHH---HHHTTTC--HHHHTTSS-CEECTTC-------TTCCSCTTSTHHHH-
T ss_pred             CCCCHHHHHHHHHhCCCcEEEEeCCCHHHH---HHHHHhc--cCHHhhee-eEEecch-------hhccCCCCChHHHH-
Confidence            567999999999999999999999864322   2222110  00 00111 1111110       01222344  4444 


Q ss_pred             HHHHHHHhhCCCCC--CCEEEecCCCcccHHhHHHcCCC
Q psy12533        464 SCLRDIMALFPPNT--QPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       464 ~~L~~i~~lf~~~~--~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                          .+...++-..  .. ...||++.+|+.+=+++|+.
T Consensus       179 ----~~~~~lgi~~~~~~-~i~iGD~~~Di~~a~~aG~~  212 (250)
T 3l5k_A          179 ----ACAKRFSPPPAMEK-CLVFEDAPNGVEAALAAGMQ  212 (250)
T ss_dssp             ----HHHHTSSSCCCGGG-EEEEESSHHHHHHHHHTTCE
T ss_pred             ----HHHHHcCCCCCcce-EEEEeCCHHHHHHHHHcCCE
Confidence                3444343221  23 46899999999999999985

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=96.91  E-value=0.0013  Score=62.73  Aligned_cols=89  Identities=20%  Similarity=0.331  Sum_probs=54.7

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  189 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p--~~fKi~  189 (567)
                      +|+.++.+.++++||++..+|+.+..   .++..|+.     .++..  ..++.+.         ++...+|  +.|+..
T Consensus       117 ~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~-----~gl~~~f~~~~~~~---------~~~~~Kp~~~~~~~~  179 (243)
T 2hsz_A          117 PNVKETLEALKAQGYILAVVTNKPTK---HVQPILTA-----FGIDHLFSEMLGGQ---------SLPEIKPHPAPFYYL  179 (243)
T ss_dssp             TTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHH-----TTCGGGCSEEECTT---------TSSSCTTSSHHHHHH
T ss_pred             CCHHHHHHHHHHCCCEEEEEECCcHH---HHHHHHHH-----cCchheEEEEEecc---------cCCCCCcCHHHHHHH
Confidence            68889999999999999999997643   44666665     33321  1122221         2223344  334333


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      + +.    +.-...- +..+|+..+|+.+-+++|+.
T Consensus       180 ~-~~----~~~~~~~-~~~vGD~~~Di~~a~~aG~~  209 (243)
T 2hsz_A          180 C-GK----FGLYPKQ-ILFVGDSQNDIFAAHSAGCA  209 (243)
T ss_dssp             H-HH----HTCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             H-HH----hCcChhh-EEEEcCCHHHHHHHHHCCCe
Confidence            2 22    2111122 56889999999999999986

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=96.89  E-value=0.0021  Score=59.84  Aligned_cols=98  Identities=13%  Similarity=0.054  Sum_probs=60.8

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      .+|+.++...++++ |++..+|..+.   ...+..++.     .++.       .+..+.+  -++...+|   |-+.++
T Consensus       118 ~~~~~~~l~~l~~~-~~~~i~t~~~~---~~~~~~l~~-----~~~~-------f~~~~~~--~~~~~~kp---~~~~~~  176 (254)
T 3umg_A          118 WPDSVPGLTAIKAE-YIIGPLSNGNT---SLLLDMAKN-----AGIP-------WDVIIGS--DINRKYKP---DPQAYL  176 (254)
T ss_dssp             CTTHHHHHHHHHHH-SEEEECSSSCH---HHHHHHHHH-----HTCC-------CSCCCCH--HHHTCCTT---SHHHHH
T ss_pred             CcCHHHHHHHHHhC-CeEEEEeCCCH---HHHHHHHHh-----CCCC-------eeEEEEc--CcCCCCCC---CHHHHH
Confidence            57899999999987 99999998654   344555655     3332       1122211  23334455   234445


Q ss_pred             HHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCC
Q psy12533        193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  235 (567)
Q Consensus       193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  235 (567)
                      .+...+.-...- ...||+..+|+.+=+++|+.   +..++..
T Consensus       177 ~~~~~lgi~~~~-~~~iGD~~~Di~~a~~aG~~---~~~~~~~  215 (254)
T 3umg_A          177 RTAQVLGLHPGE-VMLAAAHNGDLEAAHATGLA---TAFILRP  215 (254)
T ss_dssp             HHHHHTTCCGGG-EEEEESCHHHHHHHHHTTCE---EEEECCT
T ss_pred             HHHHHcCCChHH-EEEEeCChHhHHHHHHCCCE---EEEEecC
Confidence            555544322222 55788889999999999984   5666753

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=96.89  E-value=0.0015  Score=63.00  Aligned_cols=57  Identities=18%  Similarity=0.291  Sum_probs=43.5

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      .-++|+||+||||..+.          +  ..+++.+..++++++|++++.+|+|+.-.....+.+++.
T Consensus        16 ~~~~v~~DlDGTLl~~~----------~--~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~   72 (271)
T 1vjr_A           16 KIELFILDMDGTFYLDD----------S--LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN   72 (271)
T ss_dssp             GCCEEEECCBTTTEETT----------E--ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHH
T ss_pred             CCCEEEEcCcCcEEeCC----------E--ECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHH
Confidence            35779999999999871          1  236788999999999999999996655445555666655

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=96.85  E-value=0.00038  Score=72.79  Aligned_cols=109  Identities=17%  Similarity=0.234  Sum_probs=65.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC----CCchhh-hhhhhhhccChhHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN----PTSLLN-AFHTEVIEKKPQEF  186 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPllls----p~~l~~-al~REvi~k~p~~f  186 (567)
                      ..+|+.++.+.++++||++.-+|+.+   ...++..++.     .++.  .++.+    .++.+. -+..++...+|   
T Consensus       257 ~~pg~~e~l~~Lk~~G~~~~ivS~~~---~~~~~~~~~~-----lgl~--~~~~~~l~~~dg~~tg~~~~~v~~~kp---  323 (415)
T 3p96_A          257 LMPGARTTLRTLRRLGYACGVVSGGF---RRIIEPLAEE-----LMLD--YVAANELEIVDGTLTGRVVGPIIDRAG---  323 (415)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHH-----TTCS--EEEEECEEEETTEEEEEECSSCCCHHH---
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCc---HHHHHHHHHH-----cCcc--ceeeeeEEEeCCEEEeeEccCCCCCcc---
Confidence            45799999999999999999999954   4455566655     3332  11111    011110 00112222333   


Q ss_pred             HHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCce
Q psy12533        187 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  238 (567)
Q Consensus       187 Ki~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  238 (567)
                      |-+.++.+...+.-...- ...+|+..+|+.+-+++|+..    .+|++-++
T Consensus       324 k~~~~~~~~~~~gi~~~~-~i~vGD~~~Di~~a~~aG~~v----a~~~~~~~  370 (415)
T 3p96_A          324 KATALREFAQRAGVPMAQ-TVAVGDGANDIDMLAAAGLGI----AFNAKPAL  370 (415)
T ss_dssp             HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEEE----EESCCHHH
T ss_pred             hHHHHHHHHHHcCcChhh-EEEEECCHHHHHHHHHCCCeE----EECCCHHH
Confidence            666666666554321122 567899999999999999843    34665444

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.85  E-value=0.001  Score=60.83  Aligned_cols=91  Identities=15%  Similarity=0.158  Sum_probs=53.4

Q ss_pred             cchhHHHHHHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  190 (567)
Q Consensus       112 th~GVa~Ly~~i~~nG-Y~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~  190 (567)
                      ..+|+.++...++++| |++..+|..+..   ..+..|+.     .++..  .   .+..+       ...+|   |-+.
T Consensus       106 ~~~~~~~~l~~l~~~g~~~~~i~t~~~~~---~~~~~l~~-----~~~~~--~---f~~~~-------~~~kp---k~~~  162 (234)
T 3ddh_A          106 LLPGVKETLKTLKETGKYKLVVATKGDLL---DQENKLER-----SGLSP--Y---FDHIE-------VMSDK---TEKE  162 (234)
T ss_dssp             BCTTHHHHHHHHHHHCCCEEEEEEESCHH---HHHHHHHH-----HTCGG--G---CSEEE-------EESCC---SHHH
T ss_pred             cCccHHHHHHHHHhCCCeEEEEEeCCchH---HHHHHHHH-----hCcHh--h---hheee-------ecCCC---CHHH
Confidence            3568889999999999 999999976543   33444544     22210  0   01111       11223   3333


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL  226 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~  226 (567)
                      ++.+...+.-...- ...||+.. +|+.+=+++|+..
T Consensus       163 ~~~~~~~lgi~~~~-~i~iGD~~~~Di~~a~~aG~~~  198 (234)
T 3ddh_A          163 YLRLLSILQIAPSE-LLMVGNSFKSDIQPVLSLGGYG  198 (234)
T ss_dssp             HHHHHHHHTCCGGG-EEEEESCCCCCCHHHHHHTCEE
T ss_pred             HHHHHHHhCCCcce-EEEECCCcHHHhHHHHHCCCeE
Confidence            44444333221222 56899996 9999999999853

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=96.84  E-value=0.0037  Score=59.42  Aligned_cols=95  Identities=15%  Similarity=0.132  Sum_probs=52.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      .+|+.+++..++++|+++..+|+.+....   +..++.+.-.++ +.... + +.+        ++...+|   |-+.+.
T Consensus       105 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~---~~~l~~~~~~~~-~~~~~-~-~~~--------~~~~~kp---~~~~~~  167 (267)
T 1swv_A          105 INGVKEVIASLRERGIKIGSTTGYTREMM---DIVAKEAALQGY-KPDFL-V-TPD--------DVPAGRP---YPWMCY  167 (267)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEBCSSCHHHH---HHHHHHHHHTTC-CCSCC-B-CGG--------GSSCCTT---SSHHHH
T ss_pred             CccHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHHcCCccc-ChHhe-e-cCC--------ccCCCCC---CHHHHH
Confidence            35788888889999999999998765433   334443211111 11211 1 111        1112233   222333


Q ss_pred             HHHHhCCCCC-CCEEEecCCcccchhhhhhcCCC
Q psy12533        193 DIMALFPPNT-QPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       193 ~i~~lf~~~~-~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .+...+.-.. .- ...||+..+|+.+-+.+|+.
T Consensus       168 ~~~~~lgi~~~~~-~i~iGD~~nDi~~a~~aG~~  200 (267)
T 1swv_A          168 KNAMELGVYPMNH-MIKVGDTVSDMKEGRNAGMW  200 (267)
T ss_dssp             HHHHHHTCCSGGG-EEEEESSHHHHHHHHHTTSE
T ss_pred             HHHHHhCCCCCcC-EEEEeCCHHHHHHHHHCCCE
Confidence            3333332111 12 66899999999999999984

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=96.84  E-value=0.00056  Score=65.02  Aligned_cols=124  Identities=10%  Similarity=0.019  Sum_probs=71.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC---CCceecCCCchhhhhhhhhh-ccChhHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP---EGPMLLNPTSLLNAFHTEVI-EKKPQEFK  187 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP---~GPlllsp~~l~~al~REvi-~k~p~~fK  187 (567)
                      ..+|+.++...++++||++..+|+.+.   ..++..|+.     .++.   .+.++.+         .++. ..+|   |
T Consensus       111 ~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~-----~~l~~~f~~~i~~~---------~~~~~~~Kp---~  170 (259)
T 4eek_A          111 AIEGAAETLRALRAAGVPFAIGSNSER---GRLHLKLRV-----AGLTELAGEHIYDP---------SWVGGRGKP---H  170 (259)
T ss_dssp             ECTTHHHHHHHHHHHTCCEEEECSSCH---HHHHHHHHH-----TTCHHHHCSCEECG---------GGGTTCCTT---S
T ss_pred             cCccHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHh-----cChHhhccceEEeH---------hhcCcCCCC---C
Confidence            355889999999999999999999764   344556655     2221   1111211         1222 3444   2


Q ss_pred             HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCc--------eeccccccccccHHhHHhhhhh
Q psy12533        188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE--------VKHEMTQTFQSTYSNMSYLVDQ  259 (567)
Q Consensus       188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~--------~~~~~~~~~~~sY~~l~~~vd~  259 (567)
                      -+.++.+...+.-...- ...||+..+|+.+-+++|+.   ...|+..+.        +..........+...|.+++..
T Consensus       171 ~~~~~~~~~~lgi~~~~-~i~iGD~~~Di~~a~~aG~~---~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~  246 (259)
T 4eek_A          171 PDLYTFAAQQLGILPER-CVVIEDSVTGGAAGLAAGAT---LWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAE  246 (259)
T ss_dssp             SHHHHHHHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE---EEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHH
T ss_pred             hHHHHHHHHHcCCCHHH-EEEEcCCHHHHHHHHHCCCE---EEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHh
Confidence            33334444444322222 56899999999999999985   445554321        2111122345677777776654

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=96.82  E-value=0.0018  Score=62.22  Aligned_cols=48  Identities=25%  Similarity=0.270  Sum_probs=39.2

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  416 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa  416 (567)
                      -|+|+||+||||..++-          . ..+...+..++++++|++++-.|||+....
T Consensus         3 ~kli~~DlDGTLl~~~~----------~-i~~~~~~al~~l~~~G~~~~~aTGR~~~~~   50 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQK----------Q-LPLSTIEAVRRLKQSGVYVAIATGRAPFMF   50 (258)
T ss_dssp             CCEEEECTBTTTBCTTS----------C-CCHHHHHHHHHHHHTTCEEEEECSSCGGGS
T ss_pred             ceEEEEeCCCCCcCCCC----------c-cCHHHHHHHHHHHHCCCEEEEECCCChHHH
Confidence            37999999999998851          1 235577888999999999999999987654

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=96.81  E-value=0.0018  Score=62.31  Aligned_cols=57  Identities=18%  Similarity=0.291  Sum_probs=44.4

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      .-++|+||+||||..+.          +  ..+++.+..++++++|++++.+|.|+.-.....+.+++.
T Consensus        16 ~~~~v~~DlDGTLl~~~----------~--~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~   72 (271)
T 1vjr_A           16 KIELFILDMDGTFYLDD----------S--LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN   72 (271)
T ss_dssp             GCCEEEECCBTTTEETT----------E--ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHH
T ss_pred             CCCEEEEcCcCcEEeCC----------E--ECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHH
Confidence            34689999999999872          1  235678899999999999999996665556666777766

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=96.81  E-value=0.0012  Score=63.35  Aligned_cols=48  Identities=21%  Similarity=0.331  Sum_probs=39.2

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  416 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa  416 (567)
                      -|+|+||+||||..|+.          . ..+...+.+++++++|++++..|||+....
T Consensus         5 ~kli~fDlDGTLl~~~~----------~-i~~~~~~al~~l~~~G~~~~iaTGR~~~~~   52 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEVY----------G-IPESAKHAIRLCQKNHCSVVICTGRSMGTI   52 (274)
T ss_dssp             CCEEEECSBTTTBBTTT----------B-CCHHHHHHHHHHHHTTCEEEEECSSCTTTS
T ss_pred             ceEEEEECCCCCCCCCC----------c-CCHHHHHHHHHHHHCCCEEEEEeCCChHHH
Confidence            37899999999998852          1 345677888999999999999999986443

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=96.80  E-value=0.0012  Score=64.90  Aligned_cols=59  Identities=17%  Similarity=0.277  Sum_probs=44.9

Q ss_pred             ecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         79 WRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        79 w~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      |...-|+|+||+||||..++.          ..-.+...+..++++++|++|+.+|+|+....   +.++..
T Consensus        17 ~~~~~kli~~DlDGTLl~~~~----------~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~---~~~~~~   75 (283)
T 3dao_A           17 FQGMIKLIATDIDGTLVKDGS----------LLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSE---FKLFAP   75 (283)
T ss_dssp             --CCCCEEEECCBTTTBSTTC----------SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHTGG
T ss_pred             hccCceEEEEeCcCCCCCCCC----------CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH
Confidence            566678999999999998852          12235678889999999999999999998654   455554

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=96.80  E-value=0.0015  Score=63.41  Aligned_cols=64  Identities=17%  Similarity=0.417  Sum_probs=45.5

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      |+|+||+||||+ ++.  .    +     .. ..+..++++++|++++.+|+|+....   +.++..     .+++ .|+
T Consensus         3 kli~~DlDGTLl-~~~--~----~-----~~-~~~~l~~l~~~g~~~~i~Tgr~~~~~---~~~~~~-----~~~~-~~~   60 (249)
T 2zos_A            3 RLIFLDIDKTLI-PGY--E----P-----DP-AKPIIEELKDMGFEIIFNSSKTRAEQ---EYYRKE-----LEVE-TPF   60 (249)
T ss_dssp             EEEEECCSTTTC-TTS--C----S-----GG-GHHHHHHHHHTTEEEEEBCSSCHHHH---HHHHHH-----HTCC-SCE
T ss_pred             cEEEEeCCCCcc-CCC--C----c-----HH-HHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----cCCC-ccE
Confidence            789999999999 641  1    1     12 66778889999999999999987543   556665     3443 356


Q ss_pred             ecCCCc
Q psy12533        164 LLNPTS  169 (567)
Q Consensus       164 llsp~~  169 (567)
                      ++....
T Consensus        61 I~~NGa   66 (249)
T 2zos_A           61 ISENGS   66 (249)
T ss_dssp             EETTTT
T ss_pred             EEeCCe
Confidence            665543

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=96.80  E-value=0.00063  Score=60.82  Aligned_cols=90  Identities=18%  Similarity=0.191  Sum_probs=54.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccC--hhHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKK--PQEFK  462 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~--p~~fK  462 (567)
                      ..+|+.++++.++++|+++..+|+.+....   + .+..     .++..  ..++.+         .++...+  |+.|+
T Consensus        86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~---~-~~~~-----~~~~~~f~~~~~~---------~~~~~~Kp~~~~~~  147 (207)
T 2go7_A           86 LMPGAREVLAWADESGIQQFIYTHKGNNAF---T-ILKD-----LGVESYFTEILTS---------QSGFVRKPSPEAAT  147 (207)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCTHHH---H-HHHH-----HTCGGGEEEEECG---------GGCCCCTTSSHHHH
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCchHHH---H-HHHH-----cCchhheeeEEec---------CcCCCCCCCcHHHH
Confidence            467899999999999999999999875443   3 3433     22211  011111         1122233  45554


Q ss_pred             HHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        463 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       463 ~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      . +++.+.    -.... ...||+..+|+.+-+++|++
T Consensus       148 ~-~~~~~~----i~~~~-~~~iGD~~nDi~~~~~aG~~  179 (207)
T 2go7_A          148 Y-LLDKYQ----LNSDN-TYYIGDRTLDVEFAQNSGIQ  179 (207)
T ss_dssp             H-HHHHHT----CCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             H-HHHHhC----CCccc-EEEECCCHHHHHHHHHCCCe
Confidence            2 233332    12223 46899999999999999986

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=96.80  E-value=0.0014  Score=63.99  Aligned_cols=54  Identities=15%  Similarity=0.297  Sum_probs=43.1

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||..|+.           ...+...+..++++++|++++.+|+|+....   +.++..
T Consensus         6 ~kli~fDlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~   59 (290)
T 3dnp_A            6 KQLLALNIDGALLRSNG-----------KIHQATKDAIEYVKKKGIYVTLVTNRHFRSA---QKIAKS   59 (290)
T ss_dssp             CCEEEECCCCCCSCTTS-----------CCCHHHHHHHHHHHHTTCEEEEBCSSCHHHH---HHHHHH
T ss_pred             ceEEEEcCCCCCCCCCC-----------ccCHHHHHHHHHHHHCCCEEEEECCCChHHH---HHHHHH
Confidence            47899999999998852           1234577888899999999999999998655   566665

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=96.80  E-value=0.0013  Score=64.41  Aligned_cols=47  Identities=15%  Similarity=0.356  Sum_probs=39.9

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ  415 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~q  415 (567)
                      -|+|+||+||||+.++.           -..+...+..++++++|++|+..|||+...
T Consensus         4 ~kli~~DlDGTLl~~~~-----------~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~   50 (246)
T 3f9r_A            4 RVLLLFDVDGTLTPPRL-----------CQTDEMRALIKRARGAGFCVGTVGGSDFAK   50 (246)
T ss_dssp             SEEEEECSBTTTBSTTS-----------CCCHHHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred             ceEEEEeCcCCcCCCCC-----------ccCHHHHHHHHHHHHCCCEEEEECCCCHHH
Confidence            48999999999998852           134678889999999999999999999773

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=96.79  E-value=0.00086  Score=61.02  Aligned_cols=94  Identities=12%  Similarity=0.179  Sum_probs=51.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChh--HHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQ--EFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~--~fKi~  189 (567)
                      ..+|+.++.+.++++|+++..+|+.+.......   +...    .++.  ..   -+..+.+  .++...+|+  .|+..
T Consensus        92 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~---~~~~----~~l~--~~---f~~~~~~--~~~~~~Kp~~~~~~~~  157 (206)
T 2b0c_A           92 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFW---PEEY----PEIR--DA---ADHIYLS--QDLGMRKPEARIYQHV  157 (206)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCC---GGGC----HHHH--HH---CSEEEEH--HHHTCCTTCHHHHHHH
T ss_pred             cCccHHHHHHHHHHCCCeEEEEECCChHHHHHH---HHhc----cChh--hh---eeeEEEe--cccCCCCCCHHHHHHH
Confidence            356999999999999999999998764432111   1000    0000  00   0111111  123334453  34322


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                       ++.+    .-.... ...+|++.+|+.+=+++|+.
T Consensus       158 -~~~~----~~~~~~-~~~vgD~~~Di~~a~~aG~~  187 (206)
T 2b0c_A          158 -LQAE----GFSPSD-TVFFDDNADNIEGANQLGIT  187 (206)
T ss_dssp             -HHHH----TCCGGG-EEEEESCHHHHHHHHTTTCE
T ss_pred             -HHHc----CCCHHH-eEEeCCCHHHHHHHHHcCCe
Confidence             2322    111122 45779999999999999986

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=96.78  E-value=0.00083  Score=63.90  Aligned_cols=101  Identities=16%  Similarity=0.121  Sum_probs=58.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhh-hhhhhhhccChh-HH---
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLN-AFHTEVIEKKPQ-EF---  461 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~-al~rEvi~k~p~-~f---  461 (567)
                      ..||+.++.+.++++||++.-+|+.+.   ..++.+|+.+.    .+  -.++.+.+..-. .+.-+.-.+.|+ .+   
T Consensus        78 ~~pg~~~~l~~L~~~g~~~~ivS~~~~---~~~~~~l~~l~----~~--~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~  148 (236)
T 2fea_A           78 IREGFREFVAFINEHEIPFYVISGGMD---FFVYPLLEGIV----EK--DRIYCNHASFDNDYIHIDWPHSCKGTCSNQC  148 (236)
T ss_dssp             BCTTHHHHHHHHHHHTCCEEEEEEEEH---HHHHHHHTTTS----CG--GGEEEEEEECSSSBCEEECTTCCCTTCCSCC
T ss_pred             CCccHHHHHHHHHhCCCeEEEEeCCcH---HHHHHHHhcCC----CC--CeEEeeeeEEcCCceEEecCCCCcccccccc
Confidence            468999999999999999999999864   33455554211    11  123322110000 000000122334 23   


Q ss_pred             ---HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        462 ---KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       462 ---K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                         |..+++.+..    .... ...+|++.+|+.+-+++|++.
T Consensus       149 ~~~K~~~~~~~~~----~~~~-~~~vGDs~~Di~~a~~aG~~~  186 (236)
T 2fea_A          149 GCCKPSVIHELSE----PNQY-IIMIGDSVTDVEAAKLSDLCF  186 (236)
T ss_dssp             SSCHHHHHHHHCC----TTCE-EEEEECCGGGHHHHHTCSEEE
T ss_pred             CCcHHHHHHHHhc----cCCe-EEEEeCChHHHHHHHhCCeee
Confidence               5567766532    1112 457899999999999999864

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=96.76  E-value=0.0021  Score=60.51  Aligned_cols=94  Identities=19%  Similarity=0.282  Sum_probs=56.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++.+.++++||++..+|+.+.   ..++..|..     .++..  .   -+..+.  ..++...+|  +.|+..
T Consensus        95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~-----~~l~~--~---f~~~~~--~~~~~~~Kp~~~~~~~~  159 (241)
T 2hoq_A           95 EVPGARKVLIRLKELGYELGIITDGNP---VKQWEKILR-----LELDD--F---FEHVII--SDFEGVKKPHPKIFKKA  159 (241)
T ss_dssp             BCTTHHHHHHHHHHHTCEEEEEECSCH---HHHHHHHHH-----TTCGG--G---CSEEEE--GGGGTCCTTCHHHHHHH
T ss_pred             CCccHHHHHHHHHHCCCEEEEEECCCc---hhHHHHHHH-----cCcHh--h---ccEEEE--eCCCCCCCCCHHHHHHH
Confidence            357889999999999999999998653   344566665     33321  0   111211  112223344  555543


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL  501 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~  501 (567)
                      + +.+    +-.... ...||++. +|+.+=+++|+..
T Consensus       160 ~-~~~----g~~~~~-~i~iGD~~~~Di~~a~~aG~~~  191 (241)
T 2hoq_A          160 L-KAF----NVKPEE-ALMVGDRLYSDIYGAKRVGMKT  191 (241)
T ss_dssp             H-HHH----TCCGGG-EEEEESCTTTTHHHHHHTTCEE
T ss_pred             H-HHc----CCCccc-EEEECCCchHhHHHHHHCCCEE
Confidence            2 222    111122 45899998 9999999999963

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=96.76  E-value=0.0022  Score=61.07  Aligned_cols=96  Identities=10%  Similarity=0.094  Sum_probs=54.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~  190 (567)
                      .+|+.++.+.++  ||++..+|+.+..   ..+..|+.     .++..  .   -+..+.+  .++...+|  +.|+.. 
T Consensus        95 ~~~~~~~l~~l~--g~~~~i~t~~~~~---~~~~~l~~-----~gl~~--~---f~~~~~~--~~~~~~Kp~~~~~~~~-  156 (253)
T 1qq5_A           95 YPDAAQCLAELA--PLKRAILSNGAPD---MLQALVAN-----AGLTD--S---FDAVISV--DAKRVFKPHPDSYALV-  156 (253)
T ss_dssp             CTTHHHHHHHHT--TSEEEEEESSCHH---HHHHHHHH-----TTCGG--G---CSEEEEG--GGGTCCTTSHHHHHHH-
T ss_pred             CccHHHHHHHHc--CCCEEEEeCcCHH---HHHHHHHH-----CCchh--h---ccEEEEc--cccCCCCCCHHHHHHH-
Confidence            479999999998  9999999998644   34555655     22210  0   1122111  12223444  334432 


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS  234 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~  234 (567)
                          ...+.-...- ...||++.+|+.+=+++|+.   ...++.
T Consensus       157 ----~~~~~~~~~~-~~~vGD~~~Di~~a~~aG~~---~~~~~~  192 (253)
T 1qq5_A          157 ----EEVLGVTPAE-VLFVSSNGFDVGGAKNFGFS---VARVAR  192 (253)
T ss_dssp             ----HHHHCCCGGG-EEEEESCHHHHHHHHHHTCE---EEEECC
T ss_pred             ----HHHcCCCHHH-EEEEeCChhhHHHHHHCCCE---EEEECC
Confidence                2222211112 44668889999999999986   344554

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=96.76  E-value=0.0024  Score=58.98  Aligned_cols=94  Identities=16%  Similarity=0.230  Sum_probs=57.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~~  464 (567)
                      ..||+.++...++++||++..+|+.+...+   +..++.     .++.+    . .+..+.  .-++.  .++|+.|..+
T Consensus        85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~---~~~l~~-----~~l~~----~-fd~~~~--~~~~~~~KP~p~~~~~a  149 (216)
T 3kbb_A           85 ENPGVREALEFVKSKRIKLALATSTPQREA---LERLRR-----LDLEK----Y-FDVMVF--GDQVKNGKPDPEIYLLV  149 (216)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH-----TTCGG----G-CSEEEC--GGGSSSCTTSTHHHHHH
T ss_pred             cCccHHHHHHHHHHcCCCcccccCCcHHHH---HHHHHh-----cCCCc----c-cccccc--ccccCCCcccHHHHHHH
Confidence            357888999999999999999999765444   444444     22221    0 111111  11222  3455777655


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      + +.+ .+ .+ ...  .-+|++.+|+.+=+++|+..
T Consensus       150 ~-~~l-g~-~p-~e~--l~VgDs~~Di~aA~~aG~~~  180 (216)
T 3kbb_A          150 L-ERL-NV-VP-EKV--VVFEDSKSGVEAAKSAGIER  180 (216)
T ss_dssp             H-HHH-TC-CG-GGE--EEEECSHHHHHHHHHTTCCC
T ss_pred             H-Hhh-CC-Cc-cce--EEEecCHHHHHHHHHcCCcE
Confidence            4 332 11 11 222  35788899999999999975

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=96.75  E-value=0.0014  Score=65.16  Aligned_cols=48  Identities=23%  Similarity=0.463  Sum_probs=38.6

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ  415 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~q  415 (567)
                      -|+|+||+||||..++          +..+..-..+.+++++++|++++..|||+...
T Consensus        37 iKli~fDlDGTLld~~----------~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~   84 (304)
T 3l7y_A           37 VKVIATDMDGTFLNSK----------GSYDHNRFQRILKQLQERDIRFVVASSNPYRQ   84 (304)
T ss_dssp             CSEEEECCCCCCSCTT----------SCCCHHHHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred             eEEEEEeCCCCCCCCC----------CccCHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence            5899999999999884          22233336788999999999999999997643

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=96.74  E-value=0.0013  Score=63.71  Aligned_cols=70  Identities=20%  Similarity=0.266  Sum_probs=41.8

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      -|+|+||+||||..|+.           ...+...+.+++++++|.+++.+|+|+....   +.++..+   |...|..|
T Consensus         5 ~kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~l---~~~~~~~~   67 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKN-----------ELAQATIDAVQAAKAQGIKVVLCTGRPLTGV---QPYLDAM---DIDGDDQY   67 (279)
T ss_dssp             CCEEEECC----------------------CHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHHT---TCCSSSCE
T ss_pred             eEEEEEcCcCCCCCCCC-----------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHHc---CCCCCCCE
Confidence            47899999999998852           1234567788899999999999999998654   5666652   12223456


Q ss_pred             eecCCCc
Q psy12533        163 MLLNPTS  169 (567)
Q Consensus       163 lllsp~~  169 (567)
                      +++....
T Consensus        68 ~i~~nGa   74 (279)
T 3mpo_A           68 AITFNGS   74 (279)
T ss_dssp             EEEGGGT
T ss_pred             EEEcCcE
Confidence            6665544

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=96.74  E-value=0.00095  Score=63.07  Aligned_cols=97  Identities=15%  Similarity=0.219  Sum_probs=54.6

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC-ccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED-LTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  190 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~-~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~  190 (567)
                      ..+|+.++...++++||++..+|+.+....   +..|...  .| ...-. -++.+.+.       ++...+|   |-+.
T Consensus       113 ~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~---~~~l~~~--~~l~~~f~-~~~~~~~~-------~~~~~Kp---~~~~  176 (250)
T 3l5k_A          113 LMPGAEKLIIHLRKHGIPFALATSSRSASF---DMKTSRH--KEFFSLFS-HIVLGDDP-------EVQHGKP---DPDI  176 (250)
T ss_dssp             BCTTHHHHHHHHHHTTCCEEEECSCCHHHH---HHHTTTC--HHHHTTSS-CEECTTCT-------TCCSCTT---STHH
T ss_pred             CCCCHHHHHHHHHhCCCcEEEEeCCCHHHH---HHHHHhc--cCHHhhee-eEEecchh-------hccCCCC---ChHH
Confidence            456899999999999999999999764322   2222110  00 00111 11111100       1223344   2233


Q ss_pred             HHHHHHhCCCCC--CCEEEecCCcccchhhhhhcCCC
Q psy12533        191 LRDIMALFPPNT--QPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       191 L~~i~~lf~~~~--~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      ++.+...+.-..  .- ...||++.+|+.+=+++|+.
T Consensus       177 ~~~~~~~lgi~~~~~~-~i~iGD~~~Di~~a~~aG~~  212 (250)
T 3l5k_A          177 FLACAKRFSPPPAMEK-CLVFEDAPNGVEAALAAGMQ  212 (250)
T ss_dssp             HHHHHHTSSSCCCGGG-EEEEESSHHHHHHHHHTTCE
T ss_pred             HHHHHHHcCCCCCcce-EEEEeCCHHHHHHHHHcCCE
Confidence            444555443211  22 56899999999999999985

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=96.74  E-value=0.0028  Score=60.72  Aligned_cols=124  Identities=17%  Similarity=0.239  Sum_probs=69.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~~  464 (567)
                      ..||+.++...++++|+++.-+|++..     .+..|..     .++-.     ..+..+.  ..++.  .++|+.|..+
T Consensus        96 ~~pg~~~ll~~L~~~g~~i~i~t~~~~-----~~~~l~~-----~gl~~-----~fd~i~~--~~~~~~~KP~p~~~~~a  158 (243)
T 4g9b_A           96 VLPGIRSLLADLRAQQISVGLASVSLN-----APTILAA-----LELRE-----FFTFCAD--ASQLKNSKPDPEIFLAA  158 (243)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCCCTT-----HHHHHHH-----TTCGG-----GCSEECC--GGGCSSCTTSTHHHHHH
T ss_pred             ccccHHHHHHhhhcccccceecccccc-----hhhhhhh-----hhhcc-----ccccccc--cccccCCCCcHHHHHHH
Confidence            457999999999999999999998753     2334554     22221     0111111  12333  3455777665


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccc-ccc-cccccHhhHHhhhhhcCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE-MTQ-TFQSTYSNMSYLVDQMFP  537 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~-~~~-~~~~sY~~l~~~vd~~FP  537 (567)
                      | +.+. + .+ ..  ...+|++.+|+.+=+++|+..   .-|+. |--..+ +.. .-.-++.+|.++.+.+-=
T Consensus       159 ~-~~lg-~-~p-~e--~l~VgDs~~di~aA~~aG~~~---I~V~~-g~~~ad~~~~~~~~l~~~~l~~~~~~l~~  223 (243)
T 4g9b_A          159 C-AGLG-V-PP-QA--CIGIEDAQAGIDAINASGMRS---VGIGA-GLTGAQLLLPSTESLTWPRLSAFWQNVAE  223 (243)
T ss_dssp             H-HHHT-S-CG-GG--EEEEESSHHHHHHHHHHTCEE---EEEST-TCCSCSEEESSGGGCCHHHHHHHHHHHSC
T ss_pred             H-HHcC-C-Ch-HH--EEEEcCCHHHHHHHHHcCCEE---EEECC-CCCcHHHhcCChhhcCHHHHHHHHHHHHH
Confidence            4 3221 1 11 22  346789999999999999953   34443 111111 111 112356777777766543

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=96.73  E-value=0.0012  Score=64.44  Aligned_cols=47  Identities=21%  Similarity=0.364  Sum_probs=37.5

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchh-HHHHHHHHHHCCceEEEEccCcccc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNG-VTRLFTKIKENGYKLLYLSARAIGQ  415 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~G-va~l~~~i~~nGY~iiYLSaRpi~q  415 (567)
                      -|+|+||+||||..++.          . ..+. +.+..++++++|++++..|||+...
T Consensus         3 ~kli~~DlDGTLl~~~~----------~-i~~~~~~~al~~l~~~G~~~~iaTGR~~~~   50 (271)
T 1rlm_A            3 VKVIVTDMDGTFLNDAK----------T-YNQPRFMAQYQELKKRGIKFVVASGNQYYQ   50 (271)
T ss_dssp             CCEEEECCCCCCSCTTS----------C-CCHHHHHHHHHHHHHHTCEEEEECSSCHHH
T ss_pred             ccEEEEeCCCCCCCCCC----------c-CCHHHHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            37899999999998751          1 1233 4788999999999999999998643

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=96.73  E-value=0.0024  Score=58.88  Aligned_cols=93  Identities=16%  Similarity=0.234  Sum_probs=54.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi--~k~p~~fKi~~  190 (567)
                      .+|+.++...++++||++..+|+.+...+   +..++.     .++..  .   -+..+.  .-++.  .++|+.|..++
T Consensus        86 ~pg~~~~l~~L~~~g~~~~i~tn~~~~~~---~~~l~~-----~~l~~--~---fd~~~~--~~~~~~~KP~p~~~~~a~  150 (216)
T 3kbb_A           86 NPGVREALEFVKSKRIKLALATSTPQREA---LERLRR-----LDLEK--Y---FDVMVF--GDQVKNGKPDPEIYLLVL  150 (216)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH-----TTCGG--G---CSEEEC--GGGSSSCTTSTHHHHHHH
T ss_pred             CccHHHHHHHHHHcCCCcccccCCcHHHH---HHHHHh-----cCCCc--c---cccccc--ccccCCCcccHHHHHHHH
Confidence            45888999999999999999999765443   444444     22221  0   011111  11233  33455565544


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                       +.+ .+ ++ ..  ..-+|++.+|+.+=+++|+..
T Consensus       151 -~~l-g~-~p-~e--~l~VgDs~~Di~aA~~aG~~~  180 (216)
T 3kbb_A          151 -ERL-NV-VP-EK--VVVFEDSKSGVEAAKSAGIER  180 (216)
T ss_dssp             -HHH-TC-CG-GG--EEEEECSHHHHHHHHHTTCCC
T ss_pred             -Hhh-CC-Cc-cc--eEEEecCHHHHHHHHHcCCcE
Confidence             322 22 12 12  334677899999999999975

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=96.72  E-value=0.0027  Score=60.13  Aligned_cols=56  Identities=18%  Similarity=0.304  Sum_probs=43.8

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||..++          +  ..+++.+..+.++++|++++++|.++.........+|..
T Consensus         7 ik~i~fDlDGTLld~~----------~--~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~   62 (259)
T 2ho4_A            7 LKAVLVDLNGTLHIED----------A--AVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKK   62 (259)
T ss_dssp             CCEEEEESSSSSCC---------------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHH
T ss_pred             CCEEEEeCcCcEEeCC----------E--eCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHH
Confidence            4789999999999863          1  124667778999999999999998887777777777765

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=96.71  E-value=0.0021  Score=66.31  Aligned_cols=95  Identities=12%  Similarity=0.130  Sum_probs=56.8

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccC---cccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSAR---AIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEF  461 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaR---pi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~--p~~f  461 (567)
                      ..+|+.++...++++||++.-+|+.   ...+....+..+..+..    ..        +..+.  ..++...|  |+.|
T Consensus       101 ~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~----~f--------d~i~~--~~~~~~~KP~p~~~  166 (555)
T 3i28_A          101 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM----HF--------DFLIE--SCQVGMVKPEPQIY  166 (555)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT----TS--------SEEEE--HHHHTCCTTCHHHH
T ss_pred             cChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhh----he--------eEEEe--ccccCCCCCCHHHH
Confidence            4578999999999999999999996   33343344444333221    11        22221  12333344  4677


Q ss_pred             HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      ...+ +.+. + .+ ..  ...+|++.+|+.+=+++|+..
T Consensus       167 ~~~~-~~lg-~-~p-~~--~~~v~D~~~di~~a~~aG~~~  200 (555)
T 3i28_A          167 KFLL-DTLK-A-SP-SE--VVFLDDIGANLKPARDLGMVT  200 (555)
T ss_dssp             HHHH-HHHT-C-CG-GG--EEEEESCHHHHHHHHHHTCEE
T ss_pred             HHHH-HHcC-C-Ch-hH--EEEECCcHHHHHHHHHcCCEE
Confidence            6554 3221 1 11 22  335699999999999999963

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=96.70  E-value=0.0017  Score=62.63  Aligned_cols=48  Identities=21%  Similarity=0.400  Sum_probs=38.0

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ  415 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~q  415 (567)
                      -|+|+||+||||..++          ..-..+...+.+++++++|++++..|||+...
T Consensus        12 iKli~~DlDGTLl~~~----------~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~   59 (268)
T 3r4c_A           12 IKVLLLDVDGTLLSFE----------THKVSQSSIDALKKVHDSGIKIVIATGRAASD   59 (268)
T ss_dssp             CCEEEECSBTTTBCTT----------TCSCCHHHHHHHHHHHHTTCEEEEECSSCTTC
T ss_pred             eEEEEEeCCCCCcCCC----------CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence            4899999999999732          11124567888999999999999999998654

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=96.69  E-value=0.0033  Score=57.97  Aligned_cols=119  Identities=12%  Similarity=0.132  Sum_probs=63.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..+|+.++.+.++++ +++.-+|+.+..        |+.     .++..  .   -+..+.  ..++...+|+   -+.+
T Consensus       106 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~--------l~~-----~~l~~--~---f~~~~~--~~~~~~~kp~---~~~~  161 (230)
T 3vay_A          106 IFPEVQPTLEILAKT-FTLGVITNGNAD--------VRR-----LGLAD--Y---FAFALC--AEDLGIGKPD---PAPF  161 (230)
T ss_dssp             BCTTHHHHHHHHHTT-SEEEEEESSCCC--------GGG-----STTGG--G---CSEEEE--HHHHTCCTTS---HHHH
T ss_pred             cCcCHHHHHHHHHhC-CeEEEEECCchh--------hhh-----cCcHH--H---eeeeEE--ccccCCCCcC---HHHH
Confidence            456888999999988 999989987643        222     22221  0   111111  1123334442   2333


Q ss_pred             HHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCCCCEEEEcCCCceecc--ccccccccHHhHHhhhh
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRGEVKHE--MTQTFQSTYSNMSYLVD  258 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g~~~~~--~~~~~~~sY~~l~~~vd  258 (567)
                      +.+...+.-...- ...+|++. +|+.+=+++|+..   ..|+..+.-..+  .......+...|.++++
T Consensus       162 ~~~~~~~~~~~~~-~~~vGD~~~~Di~~a~~aG~~~---~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~  227 (230)
T 3vay_A          162 LEALRRAKVDASA-AVHVGDHPSDDIAGAQQAGMRA---IWYNPQGKAWDADRLPDAEIHNLSQLPEVLA  227 (230)
T ss_dssp             HHHHHHHTCCGGG-EEEEESCTTTTHHHHHHTTCEE---EEECTTCCCCCSSSCCSEEESSGGGHHHHHH
T ss_pred             HHHHHHhCCCchh-eEEEeCChHHHHHHHHHCCCEE---EEEcCCCCCCcccCCCCeeECCHHHHHHHHH
Confidence            3333333211122 56789997 9999999999963   455554432221  11123455566655554

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=96.69  E-value=0.0016  Score=64.74  Aligned_cols=49  Identities=22%  Similarity=0.439  Sum_probs=39.1

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  141 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a  141 (567)
                      -|+|+||+||||..++          +..+..-..+..++++++|++++.+|+|+....
T Consensus        37 iKli~fDlDGTLld~~----------~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~   85 (304)
T 3l7y_A           37 VKVIATDMDGTFLNSK----------GSYDHNRFQRILKQLQERDIRFVVASSNPYRQL   85 (304)
T ss_dssp             CSEEEECCCCCCSCTT----------SCCCHHHHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred             eEEEEEeCCCCCCCCC----------CccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence            5899999999999885          222333367888999999999999999987543

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=96.68  E-value=0.0025  Score=62.32  Aligned_cols=57  Identities=14%  Similarity=0.194  Sum_probs=45.8

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      .-|+|+||+||||..++          .  ..+++.+.+++++++|++++++|+|+.-........+..
T Consensus        13 ~~k~i~~D~DGtL~~~~----------~--~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~   69 (284)
T 2hx1_A           13 KYKCIFFDAFGVLKTYN----------G--LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHK   69 (284)
T ss_dssp             GCSEEEECSBTTTEETT----------E--ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred             cCCEEEEcCcCCcCcCC----------e--eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHH
Confidence            35789999999999763          1  246899999999999999999998766556666777766

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=96.68  E-value=0.0027  Score=61.02  Aligned_cols=54  Identities=22%  Similarity=0.239  Sum_probs=42.0

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||..++-          .+ .+...+..++++++|++|+-+|||+....   +.++..
T Consensus         3 ~kli~~DlDGTLl~~~~----------~i-~~~~~~al~~l~~~G~~~~~aTGR~~~~~---~~~~~~   56 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQK----------QL-PLSTIEAVRRLKQSGVYVAIATGRAPFMF---EHVRKQ   56 (258)
T ss_dssp             CCEEEECTBTTTBCTTS----------CC-CHHHHHHHHHHHHTTCEEEEECSSCGGGS---HHHHHH
T ss_pred             ceEEEEeCCCCCcCCCC----------cc-CHHHHHHHHHHHHCCCEEEEECCCChHHH---HHHHHh
Confidence            37999999999998851          12 34567788999999999999999998655   445544

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=96.66  E-value=0.0028  Score=62.45  Aligned_cols=65  Identities=15%  Similarity=0.196  Sum_probs=46.8

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      -|+|+||+||||..++.          -|+ +...+..++++++|++++.+|||+....   +.++..     .+++ +|
T Consensus         4 ikli~~DlDGTLl~~~~----------~i~-~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~-~~   63 (288)
T 1nrw_A            4 MKLIAIDLDGTLLNSKH----------QVS-LENENALRQAQRDGIEVVVSTGRAHFDV---MSIFEP-----LGIK-TW   63 (288)
T ss_dssp             CCEEEEECCCCCSCTTS----------CCC-HHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHGG-----GTCC-CE
T ss_pred             eEEEEEeCCCCCCCCCC----------ccC-HHHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----cCCC-Cc
Confidence            37899999999998852          122 3466778889999999999999987543   566655     3343 46


Q ss_pred             eecCC
Q psy12533        163 MLLNP  167 (567)
Q Consensus       163 lllsp  167 (567)
                      +++..
T Consensus        64 ~I~~N   68 (288)
T 1nrw_A           64 VISAN   68 (288)
T ss_dssp             EEEGG
T ss_pred             EEEcC
Confidence            55544

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=96.66  E-value=0.002  Score=60.29  Aligned_cols=110  Identities=15%  Similarity=0.107  Sum_probs=63.7

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~~  465 (567)
                      .+|+.++...++++ |++.-+|+.+..........|.....  .++..     .-+..+.  ..++...+|  +.|+..+
T Consensus       114 ~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~--~~l~~-----~fd~i~~--~~~~~~~KP~~~~~~~~~  183 (229)
T 4dcc_A          114 PTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRT--FKVED-----YFEKTYL--SYEMKMAKPEPEIFKAVT  183 (229)
T ss_dssp             CHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTT--BCHHH-----HCSEEEE--HHHHTCCTTCHHHHHHHH
T ss_pred             cHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhcc--CCHHH-----hCCEEEe--ecccCCCCCCHHHHHHHH
Confidence            57999999999999 99999998876555433333300011  22210     0122222  123334445  6665443


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccc
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE  516 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~  516 (567)
                       +.+ .   -...- ...+|++.+|+.+=+++|+.   ...++...+++..
T Consensus       184 -~~~-g---~~~~~-~~~vGD~~~Di~~a~~aG~~---~i~v~~~~~~k~~  225 (229)
T 4dcc_A          184 -EDA-G---IDPKE-TFFIDDSEINCKVAQELGIS---TYTPKAGEDWSHL  225 (229)
T ss_dssp             -HHH-T---CCGGG-EEEECSCHHHHHHHHHTTCE---EECCCTTCCGGGG
T ss_pred             -HHc-C---CCHHH-eEEECCCHHHHHHHHHcCCE---EEEECCHHHHHHH
Confidence             222 1   11122 45799999999999999995   4556666555543

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=96.66  E-value=0.0026  Score=63.25  Aligned_cols=56  Identities=18%  Similarity=0.243  Sum_probs=44.7

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      -|+|+||+||||..++            ...+++.+.+++++++|++++.+|+|+.-........|..
T Consensus        21 ~k~i~~D~DGTL~~~~------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~   76 (306)
T 2oyc_A           21 AQGVLFDCDGVLWNGE------------RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFAR   76 (306)
T ss_dssp             CSEEEECSBTTTEETT------------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred             CCEEEECCCCcEecCC------------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHh
Confidence            4689999999998753            1346799999999999999999998766666666666655

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=96.66  E-value=0.0018  Score=62.10  Aligned_cols=54  Identities=20%  Similarity=0.318  Sum_probs=42.3

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||..|+.          . ..+...+..++++++|++++.+|+|+....   +.++..
T Consensus         5 ~kli~fDlDGTLl~~~~----------~-i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~   58 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEVY----------G-IPESAKHAIRLCQKNHCSVVICTGRSMGTI---QDDVLS   58 (274)
T ss_dssp             CCEEEECSBTTTBBTTT----------B-CCHHHHHHHHHHHHTTCEEEEECSSCTTTS---CHHHHT
T ss_pred             ceEEEEECCCCCCCCCC----------c-CCHHHHHHHHHHHHCCCEEEEEeCCChHHH---HHHHHH
Confidence            37899999999998863          1 234567788889999999999999998655   445554

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=96.66  E-value=0.0015  Score=63.86  Aligned_cols=47  Identities=21%  Similarity=0.393  Sum_probs=36.7

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG  139 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~  139 (567)
                      -|+|+||+||||..++.  .        -+..-+.+..++++++|++|+.+|||+..
T Consensus         3 ~kli~~DlDGTLl~~~~--~--------i~~~~~~~al~~l~~~G~~~~iaTGR~~~   49 (271)
T 1rlm_A            3 VKVIVTDMDGTFLNDAK--T--------YNQPRFMAQYQELKKRGIKFVVASGNQYY   49 (271)
T ss_dssp             CCEEEECCCCCCSCTTS--C--------CCHHHHHHHHHHHHHHTCEEEEECSSCHH
T ss_pred             ccEEEEeCCCCCCCCCC--c--------CCHHHHHHHHHHHHHCCCEEEEEeCCcHH
Confidence            37899999999998752  1        11222468889999999999999999854

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=96.66  E-value=0.002  Score=62.25  Aligned_cols=47  Identities=19%  Similarity=0.314  Sum_probs=38.3

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  416 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa  416 (567)
                      |+|+||+||||..++.          ....+...+..++++++|++++.+|||+ ...
T Consensus         3 kli~~DlDGTLl~~~~----------~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~   49 (261)
T 2rbk_A            3 KALFFDIDGTLVSFET----------HRIPSSTIEALEAAHAKGLKIFIATGRP-KAI   49 (261)
T ss_dssp             CEEEECSBTTTBCTTT----------SSCCHHHHHHHHHHHHTTCEEEEECSSC-GGG
T ss_pred             cEEEEeCCCCCcCCCC----------CcCCHHHHHHHHHHHHCCCEEEEECCCh-HHH
Confidence            7899999999998852          1123557788899999999999999999 654

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=96.64  E-value=0.0017  Score=60.70  Aligned_cols=119  Identities=14%  Similarity=0.179  Sum_probs=66.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~  190 (567)
                      .+|+.++.+.++++||++..+|+.+.    .++..|+.     .++..  .   -+..+.+  .++...+|  +.|...+
T Consensus        97 ~~~~~~~l~~l~~~g~~~~i~Tn~~~----~~~~~l~~-----~gl~~--~---f~~~~~~--~~~~~~Kp~~~~~~~~~  160 (220)
T 2zg6_A           97 YDDTLEFLEGLKSNGYKLALVSNASP----RVKTLLEK-----FDLKK--Y---FDALALS--YEIKAVKPNPKIFGFAL  160 (220)
T ss_dssp             CTTHHHHHHHHHTTTCEEEECCSCHH----HHHHHHHH-----HTCGG--G---CSEEC-------------CCHHHHHH
T ss_pred             CcCHHHHHHHHHHCCCEEEEEeCCcH----HHHHHHHh-----cCcHh--H---eeEEEec--cccCCCCCCHHHHHHHH
Confidence            35899999999999999999999753    25667766     33321  0   0111111  12223344  4454433


Q ss_pred             HHHHHHhCCCCCCCEEEecCCccc-chhhhhhcCCCCCCEEEEcCCCceeccccccccccHHhHHhhhhhcC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVN-DVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMF  261 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~t-Dv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~f  261 (567)
                       +.+    .  ..|  ..+|++.+ |+.+=+++|+.   ...++..|.. .+. .....+...|.+++..++
T Consensus       161 -~~~----~--~~~--~~vgD~~~~Di~~a~~aG~~---~i~v~~~~~~-~~~-~~~i~~l~el~~~l~~~~  218 (220)
T 2zg6_A          161 -AKV----G--YPA--VHVGDIYELDYIGAKRSYVD---PILLDRYDFY-PDV-RDRVKNLREALQKIEEMN  218 (220)
T ss_dssp             -HHH----C--SSE--EEEESSCCCCCCCSSSCSEE---EEEBCTTSCC-TTC-CSCBSSHHHHHHHHHHHC
T ss_pred             -HHc----C--CCe--EEEcCCchHhHHHHHHCCCe---EEEECCCCCC-CCc-ceEECCHHHHHHHHHHhc
Confidence             222    1  234  68899998 99999999986   3344443321 121 223566777766666554

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=96.64  E-value=0.002  Score=62.07  Aligned_cols=49  Identities=20%  Similarity=0.405  Sum_probs=37.9

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  141 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a  141 (567)
                      -|+|+||+||||..++.         +. -.+...+..++++++|++++.+|+|+....
T Consensus        12 iKli~~DlDGTLl~~~~---------~~-i~~~~~~al~~l~~~G~~~~iaTGR~~~~~   60 (268)
T 3r4c_A           12 IKVLLLDVDGTLLSFET---------HK-VSQSSIDALKKVHDSGIKIVIATGRAASDL   60 (268)
T ss_dssp             CCEEEECSBTTTBCTTT---------CS-CCHHHHHHHHHHHHTTCEEEEECSSCTTCC
T ss_pred             eEEEEEeCCCCCcCCCC---------Cc-CCHHHHHHHHHHHHCCCEEEEEcCCChHHh
Confidence            48999999999997321         11 234567888899999999999999986543

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=96.63  E-value=0.0018  Score=63.37  Aligned_cols=46  Identities=15%  Similarity=0.353  Sum_probs=39.0

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG  139 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~  139 (567)
                      -|+|+||+||||+.++.           -..+...+..++++++|++|+.+|||+..
T Consensus         4 ~kli~~DlDGTLl~~~~-----------~i~~~~~~~l~~l~~~g~~~~iaTGR~~~   49 (246)
T 3f9r_A            4 RVLLLFDVDGTLTPPRL-----------CQTDEMRALIKRARGAGFCVGTVGGSDFA   49 (246)
T ss_dssp             SEEEEECSBTTTBSTTS-----------CCCHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred             ceEEEEeCcCCcCCCCC-----------ccCHHHHHHHHHHHHCCCEEEEECCCCHH
Confidence            47999999999998852           12356788899999999999999999976

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=96.62  E-value=0.0014  Score=59.96  Aligned_cols=106  Identities=12%  Similarity=0.061  Sum_probs=57.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhccc-CCccCCCCceecCCCchhhhhhhhhhccChh--HHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQ-EDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQ--EFKIS  189 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q-~~~~LP~GPlllsp~~l~~al~REvi~k~p~--~fKi~  189 (567)
                      .+|+.++.+.+++ ||++..+|+.+..   .++..++.+.+ .+.++.  ..   -+..+.+  .++...+|+  .|+..
T Consensus        91 ~~~~~~~l~~l~~-g~~~~i~t~~~~~---~~~~~~~~l~~~~~~~l~--~~---f~~~~~~--~~~~~~Kp~~~~~~~~  159 (211)
T 2i6x_A           91 SAEKFDYIDSLRP-DYRLFLLSNTNPY---VLDLAMSPRFLPSGRTLD--SF---FDKVYAS--CQMGKYKPNEDIFLEM  159 (211)
T ss_dssp             CHHHHHHHHHHTT-TSEEEEEECCCHH---HHHHHTSTTSSTTCCCGG--GG---SSEEEEH--HHHTCCTTSHHHHHHH
T ss_pred             ChHHHHHHHHHHc-CCeEEEEeCCCHH---HHHHHHhhhccccccCHH--HH---cCeEEee--cccCCCCCCHHHHHHH
Confidence            4689999999988 9999999986532   33444433110 001111  00   0122211  133344553  34432


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCce
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  238 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  238 (567)
                           ...+.-...- ...+|++.+|+.+-+++|+..   ..++...++
T Consensus       160 -----~~~~~~~~~~-~~~igD~~~Di~~a~~aG~~~---~~~~~~~~~  199 (211)
T 2i6x_A          160 -----IADSGMKPEE-TLFIDDGPANVATAERLGFHT---YCPDNGENW  199 (211)
T ss_dssp             -----HHHHCCCGGG-EEEECSCHHHHHHHHHTTCEE---ECCCTTCCC
T ss_pred             -----HHHhCCChHH-eEEeCCCHHHHHHHHHcCCEE---EEECCHHHH
Confidence                 2222211122 457999999999999999863   344544333

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=96.62  E-value=0.0025  Score=61.22  Aligned_cols=54  Identities=17%  Similarity=0.289  Sum_probs=42.8

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  423 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L  423 (567)
                      -|+|+||+||||..++          .-|  +++.+.++.++++|+++.++|+|+..........|
T Consensus         5 ~k~v~fDlDGTL~~~~----------~~~--~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l   58 (264)
T 1yv9_A            5 YQGYLIDLDGTIYLGK----------EPI--PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL   58 (264)
T ss_dssp             CCEEEECCBTTTEETT----------EEC--HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred             CCEEEEeCCCeEEeCC----------EEC--cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            4789999999999873          223  58889999999999999999999876654444433

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=96.61  E-value=0.0019  Score=58.98  Aligned_cols=97  Identities=14%  Similarity=0.163  Sum_probs=55.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~  190 (567)
                      .+|+.+++..++++|+++..+|+.     ...+..++.     .++..  -.++.+.         ++...+|+   -+.
T Consensus        93 ~~~~~~~l~~l~~~g~~~~i~t~~-----~~~~~~l~~-----~~l~~~f~~~~~~~---------~~~~~Kp~---~~~  150 (221)
T 2wf7_A           93 YPGILQLLKDLRSNKIKIALASAS-----KNGPFLLER-----MNLTGYFDAIADPA---------EVAASKPA---PDI  150 (221)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCCC-----TTHHHHHHH-----TTCGGGCSEECCTT---------TSSSCTTS---SHH
T ss_pred             CCCHHHHHHHHHHCCCeEEEEcCc-----HHHHHHHHH-----cChHHHcceEeccc---------cCCCCCCC---hHH
Confidence            368888889999999999999987     223455554     22211  0111111         12223342   122


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  235 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  235 (567)
                      ++.+...+.-...- ...||+..+|+.+-+++|+.   +..+|..
T Consensus       151 ~~~~~~~lgi~~~~-~i~iGD~~nDi~~a~~aG~~---~~~~~~~  191 (221)
T 2wf7_A          151 FIAAAHAVGVAPSE-SIGLEDSQAGIQAIKDSGAL---PIGVGRP  191 (221)
T ss_dssp             HHHHHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE---EEEESCH
T ss_pred             HHHHHHHcCCChhH-eEEEeCCHHHHHHHHHCCCE---EEEECCH
Confidence            23333333221222 56889999999999999986   3455553

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=96.61  E-value=0.0028  Score=59.65  Aligned_cols=93  Identities=20%  Similarity=0.312  Sum_probs=55.3

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~  190 (567)
                      .+|+.++.+.++++||++..+|+.+.   ..++..|..     .++..  .   -+..+.+  .++...+|  +.|+.. 
T Consensus        96 ~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~-----~~l~~--~---f~~~~~~--~~~~~~Kp~~~~~~~~-  159 (241)
T 2hoq_A           96 VPGARKVLIRLKELGYELGIITDGNP---VKQWEKILR-----LELDD--F---FEHVIIS--DFEGVKKPHPKIFKKA-  159 (241)
T ss_dssp             CTTHHHHHHHHHHHTCEEEEEECSCH---HHHHHHHHH-----TTCGG--G---CSEEEEG--GGGTCCTTCHHHHHHH-
T ss_pred             CccHHHHHHHHHHCCCEEEEEECCCc---hhHHHHHHH-----cCcHh--h---ccEEEEe--CCCCCCCCCHHHHHHH-
Confidence            46888999999999999999998553   444566665     33321  0   0111111  12333444  434433 


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL  226 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~  226 (567)
                          ...+.-...- ...||++. +|+.+=+++|+..
T Consensus       160 ----~~~~g~~~~~-~i~iGD~~~~Di~~a~~aG~~~  191 (241)
T 2hoq_A          160 ----LKAFNVKPEE-ALMVGDRLYSDIYGAKRVGMKT  191 (241)
T ss_dssp             ----HHHHTCCGGG-EEEEESCTTTTHHHHHHTTCEE
T ss_pred             ----HHHcCCCccc-EEEECCCchHhHHHHHHCCCEE
Confidence                2222211122 56899998 9999999999864

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=96.60  E-value=0.0023  Score=58.53  Aligned_cols=107  Identities=11%  Similarity=0.065  Sum_probs=58.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhccc-CCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQ-EDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q-~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      .+|+.++.+.+++ ||++..+|+.+...   ++..++.+.+ .+.++.  .  . -+..+.+  .++...+|  +.|+..
T Consensus        91 ~~~~~~~l~~l~~-g~~~~i~t~~~~~~---~~~~~~~l~~~~~~~l~--~--~-f~~~~~~--~~~~~~Kp~~~~~~~~  159 (211)
T 2i6x_A           91 SAEKFDYIDSLRP-DYRLFLLSNTNPYV---LDLAMSPRFLPSGRTLD--S--F-FDKVYAS--CQMGKYKPNEDIFLEM  159 (211)
T ss_dssp             CHHHHHHHHHHTT-TSEEEEEECCCHHH---HHHHTSTTSSTTCCCGG--G--G-SSEEEEH--HHHTCCTTSHHHHHHH
T ss_pred             ChHHHHHHHHHHc-CCeEEEEeCCCHHH---HHHHHhhhccccccCHH--H--H-cCeEEee--cccCCCCCCHHHHHHH
Confidence            5799999999998 99999999875322   3333332110 001111  0  0 1222211  22333444  455543


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK  514 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~  514 (567)
                       ++.+    +-.... ...+|++.+|+.+-+++|+.   ...++...+++
T Consensus       160 -~~~~----~~~~~~-~~~igD~~~Di~~a~~aG~~---~~~~~~~~~~~  200 (211)
T 2i6x_A          160 -IADS----GMKPEE-TLFIDDGPANVATAERLGFH---TYCPDNGENWI  200 (211)
T ss_dssp             -HHHH----CCCGGG-EEEECSCHHHHHHHHHTTCE---EECCCTTCCCH
T ss_pred             -HHHh----CCChHH-eEEeCCCHHHHHHHHHcCCE---EEEECCHHHHH
Confidence             2322    111222 35799999999999999996   34455544443

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=96.57  E-value=0.0027  Score=61.95  Aligned_cols=52  Identities=15%  Similarity=0.278  Sum_probs=40.3

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      |+|+||+||||+.++.  +         ..+...+..++ +++|.+|+.+|||+....   +.++..
T Consensus         3 kli~~DlDGTLl~~~~--~---------i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~---~~~~~~   54 (268)
T 1nf2_A            3 RVFVFDLDGTLLNDNL--E---------ISEKDRRNIEK-LSRKCYVVFASGRMLVST---LNVEKK   54 (268)
T ss_dssp             CEEEEECCCCCSCTTS--C---------CCHHHHHHHHH-HTTTSEEEEECSSCHHHH---HHHHHH
T ss_pred             cEEEEeCCCcCCCCCC--c---------cCHHHHHHHHH-HhCCCEEEEECCCChHHH---HHHHHH
Confidence            7899999999998752  1         12346778888 899999999999997544   556655

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=96.54  E-value=0.0036  Score=61.12  Aligned_cols=56  Identities=14%  Similarity=0.192  Sum_probs=46.2

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||+.++          .  ..+++.+..++++++|++++++|+++.-........|+.
T Consensus        14 ~k~i~~D~DGtL~~~~----------~--~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~   69 (284)
T 2hx1_A           14 YKCIFFDAFGVLKTYN----------G--LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHK   69 (284)
T ss_dssp             CSEEEECSBTTTEETT----------E--ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred             CCEEEEcCcCCcCcCC----------e--eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHH
Confidence            5789999999999863          1  236888999999999999999998776666677777877

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=96.54  E-value=0.003  Score=65.22  Aligned_cols=94  Identities=11%  Similarity=0.134  Sum_probs=55.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccC---cccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChh--HHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSAR---AIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQ--EFK  187 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaR---pi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~--~fK  187 (567)
                      .+|+.++...++++||++.-+|+.   ...+.......+..+..    .-        +..+.  ..++...||+  .|.
T Consensus       102 ~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~----~f--------d~i~~--~~~~~~~KP~p~~~~  167 (555)
T 3i28_A          102 NRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM----HF--------DFLIE--SCQVGMVKPEPQIYK  167 (555)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT----TS--------SEEEE--HHHHTCCTTCHHHHH
T ss_pred             ChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhh----he--------eEEEe--ccccCCCCCCHHHHH
Confidence            468889999999999999999996   33344444444333221    11        12221  1244444554  455


Q ss_pred             HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      ..+ +.+ .+ .+ ..  ...+|+..+|+.+=+++|+..
T Consensus       168 ~~~-~~l-g~-~p-~~--~~~v~D~~~di~~a~~aG~~~  200 (555)
T 3i28_A          168 FLL-DTL-KA-SP-SE--VVFLDDIGANLKPARDLGMVT  200 (555)
T ss_dssp             HHH-HHH-TC-CG-GG--EEEEESCHHHHHHHHHHTCEE
T ss_pred             HHH-HHc-CC-Ch-hH--EEEECCcHHHHHHHHHcCCEE
Confidence            444 322 11 11 12  345699999999999999863

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=96.53  E-value=0.0036  Score=62.18  Aligned_cols=56  Identities=18%  Similarity=0.243  Sum_probs=45.7

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||..++            ...+++.+..++++++|++++++|+|+.-........|+.
T Consensus        21 ~k~i~~D~DGTL~~~~------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~   76 (306)
T 2oyc_A           21 AQGVLFDCDGVLWNGE------------RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFAR   76 (306)
T ss_dssp             CSEEEECSBTTTEETT------------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred             CCEEEECCCCcEecCC------------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHh
Confidence            4689999999998753            1235789999999999999999998777667667777776

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=96.52  E-value=0.00074  Score=68.28  Aligned_cols=112  Identities=15%  Similarity=0.203  Sum_probs=64.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKI  463 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~---GPvl~spd~l~~al~rEvi~k~p~~fK~  463 (567)
                      ..+|+.++...++++||++.-+|+.+.   ..++..++.     .++..   .-+-.....+.+.+..++...+|   |-
T Consensus       179 ~~pg~~~~l~~L~~~g~~~~ivS~~~~---~~~~~~~~~-----lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kp---k~  247 (335)
T 3n28_A          179 LMPELPELVATLHAFGWKVAIASGGFT---YFSDYLKEQ-----LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQT---KA  247 (335)
T ss_dssp             CCTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHH-----HTCSEEEEEEEEEETTEEEEEEESCCCCHHH---HH
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHHH-----cCCCeEEeeeeEeeCCeeeeeecccccChhh---hH
Confidence            568999999999999999999998654   334555544     33321   00000000111001112223233   55


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccc
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK  514 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~  514 (567)
                      +.+..+...+.-.... ...+|+..+|+.+-+++|+.    +.+|.+-+++
T Consensus       248 ~~~~~~~~~lgi~~~~-~v~vGDs~nDi~~a~~aG~~----va~~~~~~~~  293 (335)
T 3n28_A          248 DILLTLAQQYDVEIHN-TVAVGDGANDLVMMAAAGLG----VAYHAKPKVE  293 (335)
T ss_dssp             HHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE----EEESCCHHHH
T ss_pred             HHHHHHHHHcCCChhh-EEEEeCCHHHHHHHHHCCCe----EEeCCCHHHH
Confidence            5555555444322223 46899999999999999984    3446654443

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=96.51  E-value=0.0027  Score=59.45  Aligned_cols=109  Identities=16%  Similarity=0.117  Sum_probs=61.6

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~  190 (567)
                      .+|+.++...++++ |++.-+|+.+..........|.....  .+|.  +.   -+..+.  ..++...+|  +.|+..+
T Consensus       114 ~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~--~~l~--~~---fd~i~~--~~~~~~~KP~~~~~~~~~  183 (229)
T 4dcc_A          114 PTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRT--FKVE--DY---FEKTYL--SYEMKMAKPEPEIFKAVT  183 (229)
T ss_dssp             CHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTT--BCHH--HH---CSEEEE--HHHHTCCTTCHHHHHHHH
T ss_pred             cHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhcc--CCHH--Hh---CCEEEe--ecccCCCCCCHHHHHHHH
Confidence            47999999999998 99999998776555444343300011  2221  00   112221  123444455  4454433


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceec
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH  240 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~  240 (567)
                       +.+ .+ +  ..- ...+|++.+|+.+=+++|+.   +..++...+++.
T Consensus       184 -~~~-g~-~--~~~-~~~vGD~~~Di~~a~~aG~~---~i~v~~~~~~k~  224 (229)
T 4dcc_A          184 -EDA-GI-D--PKE-TFFIDDSEINCKVAQELGIS---TYTPKAGEDWSH  224 (229)
T ss_dssp             -HHH-TC-C--GGG-EEEECSCHHHHHHHHHTTCE---EECCCTTCCGGG
T ss_pred             -HHc-CC-C--HHH-eEEECCCHHHHHHHHHcCCE---EEEECCHHHHHH
Confidence             222 11 1  122 56789999999999999985   345566545544

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=96.51  E-value=0.003  Score=63.37  Aligned_cols=54  Identities=19%  Similarity=0.238  Sum_probs=42.4

Q ss_pred             CcEEEEecCCccccC-CccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH--Hh
Q psy12533         83 DKIVISDIDGTITKS-DVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL--QS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkS-D~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L--~~  150 (567)
                      -|+|+||+||||+.+ +.           ...+...+..++++++|.+|+.+|||+....   +.++  ..
T Consensus        27 ikli~~DlDGTLl~~~~~-----------~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~---~~~~~~~~   83 (301)
T 2b30_A           27 IKLLLIDFDGTLFVDKDI-----------KVPSENIDAIKEAIEKGYMVSICTGRSKVGI---LSAFGEEN   83 (301)
T ss_dssp             CCEEEEETBTTTBCCTTT-----------CSCHHHHHHHHHHHHHTCEEEEECSSCHHHH---HHHHCHHH
T ss_pred             ccEEEEECCCCCcCCCCC-----------ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHhhHHh
Confidence            478999999999987 42           1235677888999999999999999996544   5566  55

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=96.51  E-value=0.003  Score=61.07  Aligned_cols=47  Identities=19%  Similarity=0.318  Sum_probs=37.6

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  141 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a  141 (567)
                      |+|+||+||||..++.         ..+ .+...+..++++++|++++.+|||+ ...
T Consensus         3 kli~~DlDGTLl~~~~---------~~i-~~~~~~al~~l~~~G~~~~iaTGR~-~~~   49 (261)
T 2rbk_A            3 KALFFDIDGTLVSFET---------HRI-PSSTIEALEAAHAKGLKIFIATGRP-KAI   49 (261)
T ss_dssp             CEEEECSBTTTBCTTT---------SSC-CHHHHHHHHHHHHTTCEEEEECSSC-GGG
T ss_pred             cEEEEeCCCCCcCCCC---------CcC-CHHHHHHHHHHHHCCCEEEEECCCh-HHH
Confidence            7899999999998852         112 3456778889999999999999999 644

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=96.50  E-value=0.0034  Score=60.31  Aligned_cols=55  Identities=16%  Similarity=0.283  Sum_probs=43.6

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHH
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ  149 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~  149 (567)
                      -|+|+||+||||..++          .-|  +++.+..+.++++|+++.++|+|+..........|.
T Consensus         5 ~k~v~fDlDGTL~~~~----------~~~--~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~   59 (264)
T 1yv9_A            5 YQGYLIDLDGTIYLGK----------EPI--PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLA   59 (264)
T ss_dssp             CCEEEECCBTTTEETT----------EEC--HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHH
T ss_pred             CCEEEEeCCCeEEeCC----------EEC--cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence            4789999999999874          223  578889999999999999999998866654444443

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=96.49  E-value=0.0032  Score=61.20  Aligned_cols=92  Identities=11%  Similarity=0.171  Sum_probs=55.8

Q ss_pred             cchhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHH
Q psy12533        387 AQNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKI  463 (567)
Q Consensus       387 ~h~Gva~l~~~i~~n-GY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~  463 (567)
                      ..+|+.+++..++++ |+++..+|+.+...   ++..|..     .++..      .+..+++  .++.  ..+|+.|+.
T Consensus       115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~---~~~~l~~-----~~l~~------f~~i~~~--~~~~~~kp~~~~~~~  178 (275)
T 2qlt_A          115 EVPGAVKLCNALNALPKEKWAVATSGTRDM---AKKWFDI-----LKIKR------PEYFITA--NDVKQGKPHPEPYLK  178 (275)
T ss_dssp             ECTTHHHHHHHHHTSCGGGEEEECSSCHHH---HHHHHHH-----HTCCC------CSSEECG--GGCSSCTTSSHHHHH
T ss_pred             cCcCHHHHHHHHHhccCCeEEEEeCCCHHH---HHHHHHH-----cCCCc------cCEEEEc--ccCCCCCCChHHHHH
Confidence            356888999999999 99999999876433   4555655     23321      1111111  1122  234455543


Q ss_pred             HHHHHHHhhCCC-------CCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        464 SCLRDIMALFPP-------NTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       464 ~~L~~i~~lf~~-------~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      .     ...+.-       .... ..+||+..+|+.+-+++|+.
T Consensus       179 ~-----~~~lgi~~~~~~~~~~~-~i~~GDs~nDi~~a~~AG~~  216 (275)
T 2qlt_A          179 G-----RNGLGFPINEQDPSKSK-VVVFEDAPAGIAAGKAAGCK  216 (275)
T ss_dssp             H-----HHHTTCCCCSSCGGGSC-EEEEESSHHHHHHHHHTTCE
T ss_pred             H-----HHHcCCCccccCCCcce-EEEEeCCHHHHHHHHHcCCE
Confidence            3     222221       1222 46899999999999999985

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=96.48  E-value=0.0042  Score=59.48  Aligned_cols=125  Identities=15%  Similarity=0.255  Sum_probs=68.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC-CceecCCCchhhhhhhhhhc--cChhHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIE--KKPQEFKI  188 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~-GPlllsp~~l~~al~REvi~--k~p~~fKi  188 (567)
                      ..+||.++...++++|+++.-+|++..  +   +..|+.     .++.. -..+.+.        -++..  ++|+.|..
T Consensus        96 ~~pg~~~ll~~L~~~g~~i~i~t~~~~--~---~~~l~~-----~gl~~~fd~i~~~--------~~~~~~KP~p~~~~~  157 (243)
T 4g9b_A           96 VLPGIRSLLADLRAQQISVGLASVSLN--A---PTILAA-----LELREFFTFCADA--------SQLKNSKPDPEIFLA  157 (243)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCCCTT--H---HHHHHH-----TTCGGGCSEECCG--------GGCSSCTTSTHHHHH
T ss_pred             ccccHHHHHHhhhcccccceecccccc--h---hhhhhh-----hhhcccccccccc--------ccccCCCCcHHHHHH
Confidence            356999999999999999999998753  2   334544     22211 0111111        13333  34555655


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc-cccc-ccccHHhHHhhhhhcCCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE-MTQT-FQSTYSNMSYLVDQMFPSS  264 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~-~~~~-~~~sY~~l~~~vd~~fP~~  264 (567)
                      +| +.+ .+ ++ ..  ...+|+..+|+.+=+++|+..   .-|+. |--..+ .... -.-++.+|.++.+++.-.|
T Consensus       158 a~-~~l-g~-~p-~e--~l~VgDs~~di~aA~~aG~~~---I~V~~-g~~~ad~~~~~~~~l~~~~l~~~~~~l~~~l  225 (243)
T 4g9b_A          158 AC-AGL-GV-PP-QA--CIGIEDAQAGIDAINASGMRS---VGIGA-GLTGAQLLLPSTESLTWPRLSAFWQNVAENL  225 (243)
T ss_dssp             HH-HHH-TS-CG-GG--EEEEESSHHHHHHHHHHTCEE---EEEST-TCCSCSEEESSGGGCCHHHHHHHHHHHSCCG
T ss_pred             HH-HHc-CC-Ch-HH--EEEEcCCHHHHHHHHHcCCEE---EEECC-CCCcHHHhcCChhhcCHHHHHHHHHHHHHHh
Confidence            44 322 22 11 12  446788899999999999853   33432 211001 1111 1235777887776654443

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=96.47  E-value=0.0046  Score=57.16  Aligned_cols=42  Identities=29%  Similarity=0.443  Sum_probs=33.1

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccC
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSAR  411 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaR  411 (567)
                      -|+|+||+||||..|+          ..+  +.+.+..+.++++|.+++.+|.+
T Consensus         3 ~k~i~fDlDGTLl~~~----------~~~--~~~~~~~~~l~~~g~~~~~~t~~   44 (250)
T 2c4n_A            3 IKNVICDIDGVLMHDN----------VAV--PGAAEFLHGIMDKGLPLVLLTNY   44 (250)
T ss_dssp             CCEEEEECBTTTEETT----------EEC--TTHHHHHHHHHHTTCCEEEEESC
T ss_pred             ccEEEEcCcceEEeCC----------EeC--cCHHHHHHHHHHcCCcEEEEECC
Confidence            3789999999999884          222  23377888899999999999943

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=96.47  E-value=0.0027  Score=58.15  Aligned_cols=97  Identities=14%  Similarity=0.132  Sum_probs=56.8

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~--p~~fK~~  464 (567)
                      ..+|+.++++.++++ |++..+|+.+.   ..++..|+.     .++..  .   .+..+.  ..++...|  |+.|+..
T Consensus        84 ~~~~~~~~l~~l~~~-~~~~i~s~~~~---~~~~~~l~~-----~~l~~--~---f~~~~~--~~~~~~~KP~~~~~~~~  147 (209)
T 2hdo_A           84 LYPGITSLFEQLPSE-LRLGIVTSQRR---NELESGMRS-----YPFMM--R---MAVTIS--ADDTPKRKPDPLPLLTA  147 (209)
T ss_dssp             ECTTHHHHHHHSCTT-SEEEEECSSCH---HHHHHHHTT-----SGGGG--G---EEEEEC--GGGSSCCTTSSHHHHHH
T ss_pred             cCCCHHHHHHHHHhc-CcEEEEeCCCH---HHHHHHHHH-----cChHh--h---ccEEEe--cCcCCCCCCCcHHHHHH
Confidence            457888888888889 99999998753   344666655     33321  0   011111  11222344  4555433


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTIN  508 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In  508 (567)
                      + +.    +.-.... ...+|+..+|+.+-+++|+.   +..++
T Consensus       148 ~-~~----~~~~~~~-~i~vGD~~~Di~~a~~aG~~---~~~~~  182 (209)
T 2hdo_A          148 L-EK----VNVAPQN-ALFIGDSVSDEQTAQAANVD---FGLAV  182 (209)
T ss_dssp             H-HH----TTCCGGG-EEEEESSHHHHHHHHHHTCE---EEEEG
T ss_pred             H-HH----cCCCccc-EEEECCChhhHHHHHHcCCe---EEEEc
Confidence            2 22    2211222 45899999999999999995   44455

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=96.44  E-value=0.0095  Score=54.02  Aligned_cols=92  Identities=13%  Similarity=0.173  Sum_probs=54.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~  464 (567)
                      ..+|+.++++.++++| ++..+|+.+...   .+..|+.     .++..     .-+..+.  ..++...+|  +.|+..
T Consensus        87 ~~~~~~~~l~~l~~~g-~~~i~s~~~~~~---~~~~l~~-----~~~~~-----~f~~~~~--~~~~~~~Kp~~~~~~~~  150 (200)
T 3cnh_A           87 PRPEVLALARDLGQRY-RMYSLNNEGRDL---NEYRIRT-----FGLGE-----FLLAFFT--SSALGVMKPNPAMYRLG  150 (200)
T ss_dssp             BCHHHHHHHHHHTTTS-EEEEEECCCHHH---HHHHHHH-----HTGGG-----TCSCEEE--HHHHSCCTTCHHHHHHH
T ss_pred             cCccHHHHHHHHHHcC-CEEEEeCCcHHH---HHHHHHh-----CCHHH-----hcceEEe--ecccCCCCCCHHHHHHH
Confidence            4578999999999999 999999876433   3445544     22211     0112221  122323344  455432


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                       ++.+.    -.... ...+|++.+|+.+-+++|+.
T Consensus       151 -~~~~~----~~~~~-~~~vgD~~~Di~~a~~aG~~  180 (200)
T 3cnh_A          151 -LTLAQ----VRPEE-AVMVDDRLQNVQAARAVGMH  180 (200)
T ss_dssp             -HHHHT----CCGGG-EEEEESCHHHHHHHHHTTCE
T ss_pred             -HHHcC----CCHHH-eEEeCCCHHHHHHHHHCCCE
Confidence             33321    11122 35789999999999999995

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=96.42  E-value=0.0051  Score=56.86  Aligned_cols=56  Identities=21%  Similarity=0.322  Sum_probs=40.2

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||..++          +.+.  ...+..+.++++|.+++.+|.+..........++..
T Consensus         3 ~k~i~fDlDGTLl~~~----------~~~~--~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~   58 (250)
T 2c4n_A            3 IKNVICDIDGVLMHDN----------VAVP--GAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFAT   58 (250)
T ss_dssp             CCEEEEECBTTTEETT----------EECT--THHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHH
T ss_pred             ccEEEEcCcceEEeCC----------EeCc--CHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHH
Confidence            3789999999999885          2232  236788889999999999995544334444555554

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=96.34  E-value=0.0026  Score=60.47  Aligned_cols=101  Identities=17%  Similarity=0.181  Sum_probs=57.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhh-hhhhhhhccChhH-H---
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLN-AFHTEVIEKKPQE-F---  186 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~-al~REvi~k~p~~-f---  186 (567)
                      ..+|+.++.+.++++||++.-+|+.+.   ..++.+|+.+.    .+  -.++.+....-. .+.-+.-...|+. +   
T Consensus        78 ~~pg~~~~l~~L~~~g~~~~ivS~~~~---~~~~~~l~~l~----~~--~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~  148 (236)
T 2fea_A           78 IREGFREFVAFINEHEIPFYVISGGMD---FFVYPLLEGIV----EK--DRIYCNHASFDNDYIHIDWPHSCKGTCSNQC  148 (236)
T ss_dssp             BCTTHHHHHHHHHHHTCCEEEEEEEEH---HHHHHHHTTTS----CG--GGEEEEEEECSSSBCEEECTTCCCTTCCSCC
T ss_pred             CCccHHHHHHHHHhCCCeEEEEeCCcH---HHHHHHHhcCC----CC--CeEEeeeeEEcCCceEEecCCCCcccccccc
Confidence            356999999999999999999999764   34455554211    11  123322110000 0000001123331 2   


Q ss_pred             ---HHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        187 ---KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       187 ---Ki~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                         |..+++.+.-  .+  . =...+|++.+|+.+-+++|++.
T Consensus       149 ~~~K~~~~~~~~~--~~--~-~~~~vGDs~~Di~~a~~aG~~~  186 (236)
T 2fea_A          149 GCCKPSVIHELSE--PN--Q-YIIMIGDSVTDVEAAKLSDLCF  186 (236)
T ss_dssp             SSCHHHHHHHHCC--TT--C-EEEEEECCGGGHHHHHTCSEEE
T ss_pred             CCcHHHHHHHHhc--cC--C-eEEEEeCChHHHHHHHhCCeee
Confidence               5566666531  11  1 2567889999999999999864

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=96.31  E-value=0.012  Score=53.40  Aligned_cols=92  Identities=13%  Similarity=0.196  Sum_probs=52.6

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChh--HHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQ--EFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~--~fKi~  189 (567)
                      ..+|+.++.+.++++| ++..+|+.+...   .+..|+.     .++..  .   -+..+.  ..++...+|+  .|+..
T Consensus        87 ~~~~~~~~l~~l~~~g-~~~i~s~~~~~~---~~~~l~~-----~~~~~--~---f~~~~~--~~~~~~~Kp~~~~~~~~  150 (200)
T 3cnh_A           87 PRPEVLALARDLGQRY-RMYSLNNEGRDL---NEYRIRT-----FGLGE--F---LLAFFT--SSALGVMKPNPAMYRLG  150 (200)
T ss_dssp             BCHHHHHHHHHHTTTS-EEEEEECCCHHH---HHHHHHH-----HTGGG--T---CSCEEE--HHHHSCCTTCHHHHHHH
T ss_pred             cCccHHHHHHHHHHcC-CEEEEeCCcHHH---HHHHHHh-----CCHHH--h---cceEEe--ecccCCCCCCHHHHHHH
Confidence            3468889999999999 999999875433   3445544     22210  0   011211  1133334453  34322


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                       ++.+    .-...- ...+|++.+|+.+-+++|+.
T Consensus       151 -~~~~----~~~~~~-~~~vgD~~~Di~~a~~aG~~  180 (200)
T 3cnh_A          151 -LTLA----QVRPEE-AVMVDDRLQNVQAARAVGMH  180 (200)
T ss_dssp             -HHHH----TCCGGG-EEEEESCHHHHHHHHHTTCE
T ss_pred             -HHHc----CCCHHH-eEEeCCCHHHHHHHHHCCCE
Confidence             2222    111122 45789999999999999985

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=96.23  E-value=0.0055  Score=60.86  Aligned_cols=38  Identities=24%  Similarity=0.445  Sum_probs=33.2

Q ss_pred             cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        110 DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus       110 Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      +--++|+.++++.++++|++++.+|+   +....++..++.
T Consensus       140 i~l~~g~~e~i~~l~~~gi~v~ivSg---g~~~~i~~i~~~  177 (297)
T 4fe3_A          140 VMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQ  177 (297)
T ss_dssp             CCBCBTHHHHHHHHHHTTCCEEEEEE---EEHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHHH
Confidence            45678999999999999999999998   778888888776

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=96.23  E-value=0.0035  Score=60.18  Aligned_cols=91  Identities=16%  Similarity=0.248  Sum_probs=54.3

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~~~  465 (567)
                      .||+.++...++++|+++.-.|+++.     .+..|+.     .+|.+     ..+..+++  -++.  .++|+.|..++
T Consensus       118 ~p~~~~ll~~Lk~~g~~i~i~~~~~~-----~~~~L~~-----~gl~~-----~Fd~i~~~--~~~~~~KP~p~~~~~a~  180 (250)
T 4gib_A          118 LPGIESLLIDVKSNNIKIGLSSASKN-----AINVLNH-----LGISD-----KFDFIADA--GKCKNNKPHPEIFLMSA  180 (250)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHH-----HTCGG-----GCSEECCG--GGCCSCTTSSHHHHHHH
T ss_pred             chhHHHHHHHHHhcccccccccccch-----hhhHhhh-----ccccc-----ccceeecc--cccCCCCCcHHHHHHHH
Confidence            46899999999999999987776643     2344554     33321     01122211  1222  34557776654


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                       +.+ .+ .+ ..  ..-+|++.+|+.+=+++|+..
T Consensus       181 -~~l-g~-~p-~e--~l~VGDs~~Di~aA~~aG~~~  210 (250)
T 4gib_A          181 -KGL-NV-NP-QN--CIGIEDASAGIDAINSANMFS  210 (250)
T ss_dssp             -HHH-TC-CG-GG--EEEEESSHHHHHHHHHTTCEE
T ss_pred             -HHh-CC-Ch-HH--eEEECCCHHHHHHHHHcCCEE
Confidence             332 11 11 22  235789999999999999953

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=96.22  E-value=0.0067  Score=63.17  Aligned_cols=56  Identities=18%  Similarity=0.280  Sum_probs=45.2

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHH
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ  424 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~  424 (567)
                      ..++++||+||||+..+          +  .-||+.+.++.++++|++++++|..+-.-.+...+.|.
T Consensus        12 ~~~~~l~D~DGvl~~g~----------~--~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~   67 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFRGK----------K--PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFIS   67 (352)
T ss_dssp             CCEEEEECCBTTTEETT----------E--ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHH
T ss_pred             cCCEEEEECCCeeEcCC----------e--eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHH
Confidence            47889999999999763          1  23799999999999999999999987655555555555

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=96.17  E-value=0.0066  Score=60.31  Aligned_cols=100  Identities=18%  Similarity=0.256  Sum_probs=58.1

Q ss_pred             CCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-----ceecCCCchhhhhhhhhhccCh-
Q psy12533        385 DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-----PMLLNPTSLLNAFHTEVIEKKP-  458 (567)
Q Consensus       385 Dw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-----Pvl~spd~l~~al~rEvi~k~p-  458 (567)
                      +..++|+.+++..++++|++++.+|+   +....++..++.+   |..++..     .+.+..+.+...+..+.++... 
T Consensus       140 i~l~~g~~e~i~~l~~~gi~v~ivSg---g~~~~i~~i~~~~---g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k  213 (297)
T 4fe3_A          140 VMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQA---GVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNK  213 (297)
T ss_dssp             CCBCBTHHHHHHHHHHTTCCEEEEEE---EEHHHHHHHHHHT---TCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCH
T ss_pred             CCCCCcHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHHHc---CCCcccceEEeeeEEEcccceeEeccccccchhhc
Confidence            55788999999999999999999998   6677777777662   2222221     2223344444333333332211 


Q ss_pred             --hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHH
Q psy12533        459 --QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQ  495 (567)
Q Consensus       459 --~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~  495 (567)
                        ...|...   +..+.....+  ++..|+-.||+-|=+
T Consensus       214 ~~~~~k~~~---~~~~~~~~~~--v~~vGDGiNDa~m~k  247 (297)
T 4fe3_A          214 HDGALKNTD---YFSQLKDNSN--IILLGDSQGDLRMAD  247 (297)
T ss_dssp             HHHHHTCHH---HHHHTTTCCE--EEEEESSGGGGGTTT
T ss_pred             ccHHHHHHH---HHHhhccCCE--EEEEeCcHHHHHHHh
Confidence              1123222   2233223333  456689999988743

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=96.14  E-value=0.0013  Score=66.42  Aligned_cols=111  Identities=15%  Similarity=0.201  Sum_probs=63.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKI  188 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~---GPlllsp~~l~~al~REvi~k~p~~fKi  188 (567)
                      ..+|+.++...++++||++.-+|+.+.   ..++..++.     .++..   .-+-.....+...+.-++...+|   |-
T Consensus       179 ~~pg~~~~l~~L~~~g~~~~ivS~~~~---~~~~~~~~~-----lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kp---k~  247 (335)
T 3n28_A          179 LMPELPELVATLHAFGWKVAIASGGFT---YFSDYLKEQ-----LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQT---KA  247 (335)
T ss_dssp             CCTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHH-----HTCSEEEEEEEEEETTEEEEEEESCCCCHHH---HH
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHHH-----cCCCeEEeeeeEeeCCeeeeeecccccChhh---hH
Confidence            456999999999999999999998543   444555554     23320   00000000010000012222233   66


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCce
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  238 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  238 (567)
                      +.+..+...+.-.... ...+|+..+|+.+-+++|+.    +.+|.+-++
T Consensus       248 ~~~~~~~~~lgi~~~~-~v~vGDs~nDi~~a~~aG~~----va~~~~~~~  292 (335)
T 3n28_A          248 DILLTLAQQYDVEIHN-TVAVGDGANDLVMMAAAGLG----VAYHAKPKV  292 (335)
T ss_dssp             HHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE----EEESCCHHH
T ss_pred             HHHHHHHHHcCCChhh-EEEEeCCHHHHHHHHHCCCe----EEeCCCHHH
Confidence            6666666554322223 56899999999999999984    334665444

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=96.14  E-value=0.016  Score=53.38  Aligned_cols=92  Identities=11%  Similarity=0.075  Sum_probs=53.0

Q ss_pred             chhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhc-cChhHHHH
Q psy12533        388 QNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIE-KKPQEFKI  463 (567)
Q Consensus       388 h~Gva~l~~~i~~n-GY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~-k~p~~fK~  463 (567)
                      .+|+.++++.++++ |+++..+|+.+.   ..++..|..     .++..  -.++++.         ++.. ++|   +-
T Consensus        95 ~~~~~~~l~~l~~~~g~~~~i~t~~~~---~~~~~~l~~-----~~l~~~f~~~~~~~---------~~~~~~k~---~~  154 (234)
T 2hcf_A           95 LEGVRELLDALSSRSDVLLGLLTGNFE---ASGRHKLKL-----PGIDHYFPFGAFAD---------DALDRNEL---PH  154 (234)
T ss_dssp             CTTHHHHHHHHHTCTTEEEEEECSSCH---HHHHHHHHT-----TTCSTTCSCEECTT---------TCSSGGGH---HH
T ss_pred             CCCHHHHHHHHHhCCCceEEEEcCCcH---HHHHHHHHH-----CCchhhcCcceecC---------CCcCccch---HH
Confidence            56888999999999 999999998754   334555655     23221  0112111         2211 122   12


Q ss_pred             HHHHHHHhhCC--CCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        464 SCLRDIMALFP--PNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       464 ~~L~~i~~lf~--~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      .+++.+...++  -...- ...||+..+|+.+-+++|+.
T Consensus       155 ~~~~~~~~~lg~~~~~~~-~i~iGD~~~Di~~a~~aG~~  192 (234)
T 2hcf_A          155 IALERARRMTGANYSPSQ-IVIIGDTEHDIRCARELDAR  192 (234)
T ss_dssp             HHHHHHHHHHCCCCCGGG-EEEEESSHHHHHHHHTTTCE
T ss_pred             HHHHHHHHHhCCCCCccc-EEEECCCHHHHHHHHHCCCc
Confidence            22223222222  11122 46899999999999999985

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=96.12  E-value=0.0071  Score=58.74  Aligned_cols=93  Identities=10%  Similarity=0.103  Sum_probs=54.6

Q ss_pred             chhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        113 QNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       113 h~GVa~Ly~~i~~n-GY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      .+|+.++...++++ |+++..+|+.+..   ..+..|+.     .++..=-.+.+.+        ++...+|   |-+.+
T Consensus       116 ~~g~~~~L~~l~~~~g~~l~i~T~~~~~---~~~~~l~~-----~~l~~f~~i~~~~--------~~~~~kp---~~~~~  176 (275)
T 2qlt_A          116 VPGAVKLCNALNALPKEKWAVATSGTRD---MAKKWFDI-----LKIKRPEYFITAN--------DVKQGKP---HPEPY  176 (275)
T ss_dssp             CTTHHHHHHHHHTSCGGGEEEECSSCHH---HHHHHHHH-----HTCCCCSSEECGG--------GCSSCTT---SSHHH
T ss_pred             CcCHHHHHHHHHhccCCeEEEEeCCCHH---HHHHHHHH-----cCCCccCEEEEcc--------cCCCCCC---ChHHH
Confidence            45888899999999 9999999987643   34556655     2332100111111        1222233   22223


Q ss_pred             HHHHHhCCC-------CCCCEEEecCCcccchhhhhhcCCC
Q psy12533        192 RDIMALFPP-------NTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       192 ~~i~~lf~~-------~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      ..+...+.-       .... ...||+..+|+.+-+++|+.
T Consensus       177 ~~~~~~lgi~~~~~~~~~~~-~i~~GDs~nDi~~a~~AG~~  216 (275)
T 2qlt_A          177 LKGRNGLGFPINEQDPSKSK-VVVFEDAPAGIAAGKAAGCK  216 (275)
T ss_dssp             HHHHHHTTCCCCSSCGGGSC-EEEEESSHHHHHHHHHTTCE
T ss_pred             HHHHHHcCCCccccCCCcce-EEEEeCCHHHHHHHHHcCCE
Confidence            333333322       1222 67899999999999999985

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=96.11  E-value=0.0043  Score=60.01  Aligned_cols=42  Identities=19%  Similarity=0.354  Sum_probs=35.4

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcc
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAI  413 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi  413 (567)
                      +|+||+||||+.++            ...+...+.+++++++|.+++-.|+|+.
T Consensus         2 li~~DlDGTLl~~~------------~i~~~~~~al~~l~~~Gi~v~iaTGR~~   43 (259)
T 3zx4_A            2 IVFTDLDGTLLDER------------GELGPAREALERLRALGVPVVPVTAKTR   43 (259)
T ss_dssp             EEEECCCCCCSCSS------------SSCSTTHHHHHHHHHTTCCEEEBCSSCH
T ss_pred             EEEEeCCCCCcCCC------------cCCHHHHHHHHHHHHCCCeEEEEeCCCH
Confidence            69999999999884            1234577888999999999999999985

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=96.09  E-value=0.0037  Score=57.23  Aligned_cols=91  Identities=15%  Similarity=0.192  Sum_probs=52.7

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~--p~~fKi~~  190 (567)
                      .+|+.++.+.++++ |++..+|+.+.   ..++..|+.     .++..  .+   +..+.  ..++...|  |+.|+.  
T Consensus        85 ~~~~~~~l~~l~~~-~~~~i~s~~~~---~~~~~~l~~-----~~l~~--~f---~~~~~--~~~~~~~KP~~~~~~~--  146 (209)
T 2hdo_A           85 YPGITSLFEQLPSE-LRLGIVTSQRR---NELESGMRS-----YPFMM--RM---AVTIS--ADDTPKRKPDPLPLLT--  146 (209)
T ss_dssp             CTTHHHHHHHSCTT-SEEEEECSSCH---HHHHHHHTT-----SGGGG--GE---EEEEC--GGGSSCCTTSSHHHHH--
T ss_pred             CCCHHHHHHHHHhc-CcEEEEeCCCH---HHHHHHHHH-----cChHh--hc---cEEEe--cCcCCCCCCCcHHHHH--
Confidence            45888888888888 99999998653   345666655     33321  00   11111  11222345  333433  


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                         +...+.-.... ...+|+..+|+.+-+++|+.
T Consensus       147 ---~~~~~~~~~~~-~i~vGD~~~Di~~a~~aG~~  177 (209)
T 2hdo_A          147 ---ALEKVNVAPQN-ALFIGDSVSDEQTAQAANVD  177 (209)
T ss_dssp             ---HHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             ---HHHHcCCCccc-EEEECCChhhHHHHHHcCCe
Confidence               33333211122 56788999999999999985

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=96.08  E-value=0.0048  Score=59.57  Aligned_cols=57  Identities=21%  Similarity=0.374  Sum_probs=41.1

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      |+|++|+||||+.++..    |  ......+...+..++++++| +|+.+|||+....   +.++..
T Consensus         2 kli~~DlDGTLl~~~~~----~--~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~---~~~~~~   58 (239)
T 1u02_A            2 SLIFLDYDGTLVPIIMN----P--EESYADAGLLSLISDLKERF-DTYIVTGRSPEEI---SRFLPL   58 (239)
T ss_dssp             CEEEEECBTTTBCCCSC----G--GGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHHH---HHHSCS
T ss_pred             eEEEEecCCCCcCCCCC----c--ccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHH---HHHhcc
Confidence            68999999999975210    0  01124567889999999999 9999999986543   555433

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=96.02  E-value=0.017  Score=53.17  Aligned_cols=92  Identities=11%  Similarity=0.075  Sum_probs=53.3

Q ss_pred             chhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhc-cChhHHHH
Q psy12533        113 QNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIE-KKPQEFKI  188 (567)
Q Consensus       113 h~GVa~Ly~~i~~n-GY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~-k~p~~fKi  188 (567)
                      .+|+.++...++++ |+++..+|+.+.   ..++..|+.     .++..  --+..+.         ++.. ++|   +-
T Consensus        95 ~~~~~~~l~~l~~~~g~~~~i~t~~~~---~~~~~~l~~-----~~l~~~f~~~~~~~---------~~~~~~k~---~~  154 (234)
T 2hcf_A           95 LEGVRELLDALSSRSDVLLGLLTGNFE---ASGRHKLKL-----PGIDHYFPFGAFAD---------DALDRNEL---PH  154 (234)
T ss_dssp             CTTHHHHHHHHHTCTTEEEEEECSSCH---HHHHHHHHT-----TTCSTTCSCEECTT---------TCSSGGGH---HH
T ss_pred             CCCHHHHHHHHHhCCCceEEEEcCCcH---HHHHHHHHH-----CCchhhcCcceecC---------CCcCccch---HH
Confidence            45888899999999 999999998653   344556655     22221  0011111         1111 112   22


Q ss_pred             HHHHHHHHhCC--CCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        189 SCLRDIMALFP--PNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       189 ~~L~~i~~lf~--~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .+++.+...+.  -...- ...||+..+|+.+-+++|++
T Consensus       155 ~~~~~~~~~lg~~~~~~~-~i~iGD~~~Di~~a~~aG~~  192 (234)
T 2hcf_A          155 IALERARRMTGANYSPSQ-IVIIGDTEHDIRCARELDAR  192 (234)
T ss_dssp             HHHHHHHHHHCCCCCGGG-EEEEESSHHHHHHHHTTTCE
T ss_pred             HHHHHHHHHhCCCCCccc-EEEECCCHHHHHHHHHCCCc
Confidence            33333333322  11122 56899999999999999985

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=96.02  E-value=0.0094  Score=62.06  Aligned_cols=56  Identities=18%  Similarity=0.280  Sum_probs=45.5

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHH
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ  149 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~  149 (567)
                      ..++++||+||||+..+          .  .-+|+.+..+.++++|+++++||..+-.-.+...+.|.
T Consensus        12 ~~~~~l~D~DGvl~~g~----------~--~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~   67 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFRGK----------K--PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFIS   67 (352)
T ss_dssp             CCEEEEECCBTTTEETT----------E--ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHH
T ss_pred             cCCEEEEECCCeeEcCC----------e--eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHH
Confidence            46789999999999863          1  23699999999999999999999987656555666665

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=95.99  E-value=0.0066  Score=58.31  Aligned_cols=46  Identities=15%  Similarity=0.333  Sum_probs=37.9

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG  414 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~  414 (567)
                      ..|+|+||+||||..++.  .         ..+...+..++++++ .+|+..|||+..
T Consensus         5 ~~kli~~DlDGTLl~~~~--~---------i~~~~~~al~~l~~~-i~v~iaTGR~~~   50 (246)
T 2amy_A            5 GPALCLFDVDGTLTAPRQ--K---------ITKEMDDFLQKLRQK-IKIGVVGGSDFE   50 (246)
T ss_dssp             CSEEEEEESBTTTBCTTS--C---------CCHHHHHHHHHHTTT-SEEEEECSSCHH
T ss_pred             CceEEEEECCCCcCCCCc--c---------cCHHHHHHHHHHHhC-CeEEEEcCCCHH
Confidence            468999999999998851  1         245688889999999 999999999853

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=95.95  E-value=0.01  Score=58.09  Aligned_cols=56  Identities=16%  Similarity=0.206  Sum_probs=37.7

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHH---HHHH-HHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVT---RLFT-KIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva---~l~~-~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      .|+|+||+||||+.|+    +.     +-+...+.   ++++ ..++.|++++..|+|+....   +.++..
T Consensus        22 ~kliifDlDGTLlds~----i~-----~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~---~~~~~~   81 (289)
T 3gyg_A           22 QYIVFCDFDETYFPHT----ID-----EQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESI---LDKMGR   81 (289)
T ss_dssp             SEEEEEETBTTTBCSS----CC-----HHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHH---HHHHHH
T ss_pred             CeEEEEECCCCCcCCC----CC-----cchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHH---HHHHHh
Confidence            5789999999999884    11     11222233   2233 34688999999999998655   555555

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=95.88  E-value=0.0067  Score=58.55  Aligned_cols=57  Identities=21%  Similarity=0.374  Sum_probs=40.8

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      |+|++|+||||+..+.-    |  ......+...+..++++++| +|+.+|||+....   +.++..
T Consensus         2 kli~~DlDGTLl~~~~~----~--~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~---~~~~~~   58 (239)
T 1u02_A            2 SLIFLDYDGTLVPIIMN----P--EESYADAGLLSLISDLKERF-DTYIVTGRSPEEI---SRFLPL   58 (239)
T ss_dssp             CEEEEECBTTTBCCCSC----G--GGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHHH---HHHSCS
T ss_pred             eEEEEecCCCCcCCCCC----c--ccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHH---HHHhcc
Confidence            68999999999975310    0  01123457888999999999 9999999987543   555543

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=95.88  E-value=0.027  Score=53.19  Aligned_cols=89  Identities=17%  Similarity=0.205  Sum_probs=53.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..+|+.++...++ +||++..+|+.+..   .++..|..     .++..     ..+..+.+     -.++|+.|+..+ 
T Consensus       113 ~~~~~~~~l~~l~-~~~~~~i~t~~~~~---~~~~~l~~-----~~l~~-----~f~~i~~~-----~kp~~~~~~~~~-  172 (251)
T 2pke_A          113 VIAGVREAVAAIA-ADYAVVLITKGDLF---HQEQKIEQ-----SGLSD-----LFPRIEVV-----SEKDPQTYARVL-  172 (251)
T ss_dssp             BCTTHHHHHHHHH-TTSEEEEEEESCHH---HHHHHHHH-----HSGGG-----TCCCEEEE-----SCCSHHHHHHHH-
T ss_pred             cCccHHHHHHHHH-CCCEEEEEeCCCHH---HHHHHHHH-----cCcHH-----hCceeeee-----CCCCHHHHHHHH-
Confidence            3478888888898 99999999987643   33555554     22211     00111110     123456665433 


Q ss_pred             HHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIP  500 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp  500 (567)
                      +.+    .-.... ...||+.. +|+.+-+++|+.
T Consensus       173 ~~l----~~~~~~-~i~iGD~~~~Di~~a~~aG~~  202 (251)
T 2pke_A          173 SEF----DLPAER-FVMIGNSLRSDVEPVLAIGGW  202 (251)
T ss_dssp             HHH----TCCGGG-EEEEESCCCCCCHHHHHTTCE
T ss_pred             HHh----CcCchh-EEEECCCchhhHHHHHHCCCE
Confidence            222    111222 46899998 999999999995

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=95.81  E-value=0.0058  Score=59.08  Aligned_cols=66  Identities=21%  Similarity=0.271  Sum_probs=43.5

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC-CCc
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP-EGP  437 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP-~GP  437 (567)
                      .+|++|+||||..++          +  .-+...+..++++ .|++|+..|||+....   +.++..     .+++ +++
T Consensus         4 ~li~~DlDGTLl~~~----------~--~~~~~~~~l~~~~-~gi~v~iaTGR~~~~~---~~~~~~-----l~l~~~~~   62 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQ----------Q--ALEHLQEYLGDRR-GNFYLAYATGRSYHSA---RELQKQ-----VGLMEPDY   62 (244)
T ss_dssp             EEEEECTBTTTBSCH----------H--HHHHHHHHHHTTG-GGEEEEEECSSCHHHH---HHHHHH-----HTCCCCSE
T ss_pred             eEEEEeCCCCCcCCH----------H--HHHHHHHHHHHhc-CCCEEEEEcCCCHHHH---HHHHHH-----cCCCCCCE
Confidence            479999999999875          1  1123455556644 6899999999987654   666655     3343 245


Q ss_pred             eecCCCch
Q psy12533        438 MLLNPTSL  445 (567)
Q Consensus       438 vl~spd~l  445 (567)
                      ++++....
T Consensus        63 ~I~~NGa~   70 (244)
T 1s2o_A           63 WLTAVGSE   70 (244)
T ss_dssp             EEETTTTE
T ss_pred             EEECCCcE
Confidence            66655443

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=95.81  E-value=0.0065  Score=58.72  Aligned_cols=46  Identities=17%  Similarity=0.329  Sum_probs=37.1

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchH
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR  142 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~  142 (567)
                      +|+||+||||+.++   .+         .+...+..++++++|.+++.+|+|+.....
T Consensus         2 li~~DlDGTLl~~~---~i---------~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~   47 (259)
T 3zx4_A            2 IVFTDLDGTLLDER---GE---------LGPAREALERLRALGVPVVPVTAKTRKEVE   47 (259)
T ss_dssp             EEEECCCCCCSCSS---SS---------CSTTHHHHHHHHHTTCCEEEBCSSCHHHHH
T ss_pred             EEEEeCCCCCcCCC---cC---------CHHHHHHHHHHHHCCCeEEEEeCCCHHHHH
Confidence            69999999999885   22         234667888899999999999999976543

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=95.73  E-value=0.0083  Score=58.50  Aligned_cols=46  Identities=15%  Similarity=0.263  Sum_probs=37.6

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG  414 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~  414 (567)
                      ..|+|+||+||||..++.           -..+...+..++++++ .+|+..|||+..
T Consensus        12 ~~kli~~DlDGTLl~~~~-----------~is~~~~~al~~l~~~-i~v~iaTGR~~~   57 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPARQ-----------KIDPEVAAFLQKLRSR-VQIGVVGGSDYC   57 (262)
T ss_dssp             -CEEEEEESBTTTBSTTS-----------CCCHHHHHHHHHHTTT-SEEEEECSSCHH
T ss_pred             CeEEEEEeCccCCCCCCC-----------cCCHHHHHHHHHHHhC-CEEEEEcCCCHH
Confidence            358999999999998752           1245688889999999 999999999864

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=95.66  E-value=0.0099  Score=57.08  Aligned_cols=45  Identities=16%  Similarity=0.346  Sum_probs=36.8

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAI  138 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi  138 (567)
                      ..|+|++|+||||..++.  .         -.+...+..++++++ .+|+.+|||+.
T Consensus         5 ~~kli~~DlDGTLl~~~~--~---------i~~~~~~al~~l~~~-i~v~iaTGR~~   49 (246)
T 2amy_A            5 GPALCLFDVDGTLTAPRQ--K---------ITKEMDDFLQKLRQK-IKIGVVGGSDF   49 (246)
T ss_dssp             CSEEEEEESBTTTBCTTS--C---------CCHHHHHHHHHHTTT-SEEEEECSSCH
T ss_pred             CceEEEEECCCCcCCCCc--c---------cCHHHHHHHHHHHhC-CeEEEEcCCCH
Confidence            458999999999998862  1         234577888889999 99999999985

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=95.63  E-value=0.018  Score=53.01  Aligned_cols=36  Identities=3%  Similarity=0.012  Sum_probs=28.5

Q ss_pred             cchhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHHh
Q psy12533        387 AQNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       387 ~h~Gva~l~~~i~~n-GY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      ..||+.++.+.++++ ||++..+|+++...+   +.+|+.
T Consensus        74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~---~~~l~~  110 (193)
T 2i7d_A           74 PIPGALDAVREMNDLPDTQVFICTSPLLKYH---HCVGEK  110 (193)
T ss_dssp             BCTTHHHHHHHHHTSTTEEEEEEECCCSSCT---TTHHHH
T ss_pred             cCcCHHHHHHHHHhCCCCeEEEEeCCChhhH---HHHHHH
Confidence            568999999999999 999999999876544   444444

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=95.55  E-value=0.017  Score=56.48  Aligned_cols=74  Identities=14%  Similarity=0.209  Sum_probs=42.4

Q ss_pred             HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccH--hhHHhhhhhcCCCC
Q psy12533        462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTY--SNMSYLVDQMFPSS  539 (567)
Q Consensus       462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY--~~l~~~vd~~FP~~  539 (567)
                      |-..++.++..++-.... ...||+..+|+.+-+.+|+.    ++++...+...+.......+.  .-+.+.++++|.++
T Consensus       212 k~~~~~~~~~~~~~~~~~-~~~~GDs~~D~~~~~~ag~~----~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~~~  286 (289)
T 3gyg_A          212 KNEIVTFMLEKYNLNTER-AIAFGDSGNDVRMLQTVGNG----YLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGFM  286 (289)
T ss_dssp             HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHTTSSEE----EECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHcCCChhh-EEEEcCCHHHHHHHHhCCcE----EEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHHHh
Confidence            444555555444322222 56899999999999999943    344333222222232233333  34788888888775


Q ss_pred             C
Q psy12533        540 L  540 (567)
Q Consensus       540 ~  540 (567)
                      .
T Consensus       287 ~  287 (289)
T 3gyg_A          287 R  287 (289)
T ss_dssp             -
T ss_pred             h
Confidence            4

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=95.53  E-value=0.051  Score=51.24  Aligned_cols=89  Identities=18%  Similarity=0.232  Sum_probs=51.4

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      .+|+.++...++ +||++..+|+.+..   .++..|+.     .++..  .   .+..+.+     ..++|+.|+..+ +
T Consensus       114 ~~~~~~~l~~l~-~~~~~~i~t~~~~~---~~~~~l~~-----~~l~~--~---f~~i~~~-----~kp~~~~~~~~~-~  173 (251)
T 2pke_A          114 IAGVREAVAAIA-ADYAVVLITKGDLF---HQEQKIEQ-----SGLSD--L---FPRIEVV-----SEKDPQTYARVL-S  173 (251)
T ss_dssp             CTTHHHHHHHHH-TTSEEEEEEESCHH---HHHHHHHH-----HSGGG--T---CCCEEEE-----SCCSHHHHHHHH-H
T ss_pred             CccHHHHHHHHH-CCCEEEEEeCCCHH---HHHHHHHH-----cCcHH--h---Cceeeee-----CCCCHHHHHHHH-H
Confidence            358888888888 89999999986633   34555554     22211  0   0111100     123444454333 2


Q ss_pred             HHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCC
Q psy12533        193 DIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL  226 (567)
Q Consensus       193 ~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~  226 (567)
                      .    +.-...- ...||+.. +|+.+-+++|+..
T Consensus       174 ~----l~~~~~~-~i~iGD~~~~Di~~a~~aG~~~  203 (251)
T 2pke_A          174 E----FDLPAER-FVMIGNSLRSDVEPVLAIGGWG  203 (251)
T ss_dssp             H----HTCCGGG-EEEEESCCCCCCHHHHHTTCEE
T ss_pred             H----hCcCchh-EEEECCCchhhHHHHHHCCCEE
Confidence            2    2211122 56899998 9999999999863

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=95.49  E-value=0.0078  Score=58.16  Aligned_cols=65  Identities=22%  Similarity=0.274  Sum_probs=42.6

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC-CCc
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP-EGP  162 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP-~GP  162 (567)
                      .+|++|+||||+.++.            .-+...+..++++ .|++|+.+|||+....   +.++..     .+++ .++
T Consensus         4 ~li~~DlDGTLl~~~~------------~~~~~~~~l~~~~-~gi~v~iaTGR~~~~~---~~~~~~-----l~l~~~~~   62 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQQ------------ALEHLQEYLGDRR-GNFYLAYATGRSYHSA---RELQKQ-----VGLMEPDY   62 (244)
T ss_dssp             EEEEECTBTTTBSCHH------------HHHHHHHHHHTTG-GGEEEEEECSSCHHHH---HHHHHH-----HTCCCCSE
T ss_pred             eEEEEeCCCCCcCCHH------------HHHHHHHHHHHhc-CCCEEEEEcCCCHHHH---HHHHHH-----cCCCCCCE
Confidence            3799999999998751            1123445555544 6899999999987544   666665     3343 255


Q ss_pred             eecCCCc
Q psy12533        163 MLLNPTS  169 (567)
Q Consensus       163 lllsp~~  169 (567)
                      +++....
T Consensus        63 ~I~~NGa   69 (244)
T 1s2o_A           63 WLTAVGS   69 (244)
T ss_dssp             EEETTTT
T ss_pred             EEECCCc
Confidence            6666543

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=95.39  E-value=0.012  Score=57.32  Aligned_cols=46  Identities=15%  Similarity=0.292  Sum_probs=36.7

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG  139 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~  139 (567)
                      ..|+|++|+||||..++.  .         -.+...+..++++++ .+|+.+|||+..
T Consensus        12 ~~kli~~DlDGTLl~~~~--~---------is~~~~~al~~l~~~-i~v~iaTGR~~~   57 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPARQ--K---------IDPEVAAFLQKLRSR-VQIGVVGGSDYC   57 (262)
T ss_dssp             -CEEEEEESBTTTBSTTS--C---------CCHHHHHHHHHHTTT-SEEEEECSSCHH
T ss_pred             CeEEEEEeCccCCCCCCC--c---------CCHHHHHHHHHHHhC-CEEEEEcCCCHH
Confidence            358999999999998752  1         235577888889999 999999999764

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=95.38  E-value=0.013  Score=56.23  Aligned_cols=91  Identities=16%  Similarity=0.240  Sum_probs=52.2

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi--~k~p~~fKi~~  190 (567)
                      .+|+.++...++++|+++.-.|+++.     .+..|+.     .+|.+  .   .+..+.+  -++.  .++|+.|..++
T Consensus       118 ~p~~~~ll~~Lk~~g~~i~i~~~~~~-----~~~~L~~-----~gl~~--~---Fd~i~~~--~~~~~~KP~p~~~~~a~  180 (250)
T 4gib_A          118 LPGIESLLIDVKSNNIKIGLSSASKN-----AINVLNH-----LGISD--K---FDFIADA--GKCKNNKPHPEIFLMSA  180 (250)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHH-----HTCGG--G---CSEECCG--GGCCSCTTSSHHHHHHH
T ss_pred             chhHHHHHHHHHhcccccccccccch-----hhhHhhh-----ccccc--c---cceeecc--cccCCCCCcHHHHHHHH
Confidence            46889999999999999887766542     2344554     33321  0   1111111  1223  33445565544


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                       +.+ .+ .+ ..  ..-+|++.+|+.+=+++|+..
T Consensus       181 -~~l-g~-~p-~e--~l~VGDs~~Di~aA~~aG~~~  210 (250)
T 4gib_A          181 -KGL-NV-NP-QN--CIGIEDASAGIDAINSANMFS  210 (250)
T ss_dssp             -HHH-TC-CG-GG--EEEEESSHHHHHHHHHTTCEE
T ss_pred             -HHh-CC-Ch-HH--eEEECCCHHHHHHHHHcCCEE
Confidence             332 22 11 12  345778899999999999953

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=95.34  E-value=0.022  Score=52.42  Aligned_cols=30  Identities=3%  Similarity=0.081  Sum_probs=25.2

Q ss_pred             cchhHHHHHHHHHHC-CceEEEEccCcccch
Q psy12533        112 AQNGVTRLFTKIKEN-GYKLLYLSARAIGQS  141 (567)
Q Consensus       112 th~GVa~Ly~~i~~n-GY~ilYLSaRpi~~a  141 (567)
                      ..+|+.++.+.++++ ||++..+|+++....
T Consensus        74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~  104 (193)
T 2i7d_A           74 PIPGALDAVREMNDLPDTQVFICTSPLLKYH  104 (193)
T ss_dssp             BCTTHHHHHHHHHTSTTEEEEEEECCCSSCT
T ss_pred             cCcCHHHHHHHHHhCCCCeEEEEeCCChhhH
Confidence            457999999999999 999999999876443

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=94.88  E-value=0.1  Score=51.43  Aligned_cols=103  Identities=17%  Similarity=0.222  Sum_probs=69.1

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      ++|.+|+||++...     +   ...+...||+.++...++++|+++.-+|+++...+   +..++.     .++.    
T Consensus       144 ~~i~~~~d~~~~~~-----~---~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~---~~~l~~-----~gl~----  203 (287)
T 3a1c_A          144 TAVIVARNGRVEGI-----I---AVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSA---EAISRE-----LNLD----  203 (287)
T ss_dssp             EEEEEEETTEEEEE-----E---EEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH-----HTCS----
T ss_pred             eEEEEEECCEEEEE-----E---EeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHH-----hCCc----
Confidence            45777888765432     1   12355789999999999999999999999876543   555555     3332    


Q ss_pred             ecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        439 LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       439 l~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                           ..|..    ++   |+ -|..+++.+..    . .. ...+|+..+|+.+-+++|+.
T Consensus       204 -----~~f~~----i~---~~-~K~~~~~~l~~----~-~~-~~~vGDs~~Di~~a~~ag~~  246 (287)
T 3a1c_A          204 -----LVIAE----VL---PH-QKSEEVKKLQA----K-EV-VAFVGDGINDAPALAQADLG  246 (287)
T ss_dssp             -----EEECS----CC---TT-CHHHHHHHHTT----T-CC-EEEEECTTTCHHHHHHSSEE
T ss_pred             -----eeeee----cC---hH-HHHHHHHHHhc----C-Ce-EEEEECCHHHHHHHHHCCee
Confidence                 11211    11   21 25666776654    1 22 56899999999999999994

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=93.85  E-value=0.43  Score=43.41  Aligned_cols=128  Identities=20%  Similarity=0.241  Sum_probs=74.1

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~~  465 (567)
                      .+|+.++++.++++||++..+|+.+.+....++..+..     .++..  .   -+..+.  ..++...+|  +.|+   
T Consensus       101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~-----~~l~~--~---f~~~~~--~~~~~~~kp~~~~~~---  165 (235)
T 2om6_A          101 LEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLER-----FGLME--F---IDKTFF--ADEVLSYKPRKEMFE---  165 (235)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-----TTCGG--G---CSEEEE--HHHHTCCTTCHHHHH---
T ss_pred             CccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHh-----CCcHH--H---hhhhee--ccccCCCCCCHHHHH---
Confidence            57899999999999999999999873334555666666     33321  0   112221  123333344  4444   


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCCCCEEEEcCCCcccc--cccccccccHhhHHhhhhhcC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRGEVKH--EMTQTFQSTYSNMSYLVDQMF  536 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g~~~~--~~~~~~~~sY~~l~~~vd~~F  536 (567)
                        .+...++-.... ...||+.. +|+.+=+++|+.   +..++..+....  ........+...|.+++..+.
T Consensus       166 --~~~~~lgi~~~~-~~~iGD~~~nDi~~a~~aG~~---~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~  233 (235)
T 2om6_A          166 --KVLNSFEVKPEE-SLHIGDTYAEDYQGARKVGMW---AVWINQEGDKVRKLEERGFEIPSIANLKDVIELIS  233 (235)
T ss_dssp             --HHHHHTTCCGGG-EEEEESCTTTTHHHHHHTTSE---EEEECTTCCSCEEEETTEEEESSGGGHHHHHHHTC
T ss_pred             --HHHHHcCCCccc-eEEECCChHHHHHHHHHCCCE---EEEECCCCCCcccCCCCcchHhhHHHHHHHHHHHh
Confidence              333333322223 46899998 999999999995   344554322111  111123466667766665553

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=93.30  E-value=0.2  Score=49.30  Aligned_cols=106  Identities=16%  Similarity=0.193  Sum_probs=71.6

Q ss_pred             CCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533         81 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  160 (567)
Q Consensus        81 ~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~  160 (567)
                      .+.++|.+|+|+++...     +   ...+...+|+.++...++++|+++.-+|+++...+   +..++.     .+|. 
T Consensus       141 ~g~~~i~~~~d~~~~~~-----~---~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~---~~~l~~-----~gl~-  203 (287)
T 3a1c_A          141 EAKTAVIVARNGRVEGI-----I---AVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSA---EAISRE-----LNLD-  203 (287)
T ss_dssp             TTCEEEEEEETTEEEEE-----E---EEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH-----HTCS-
T ss_pred             CCCeEEEEEECCEEEEE-----E---EeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHH-----hCCc-
Confidence            45578999999876432     1   12345788999999999999999999999876543   555555     3332 


Q ss_pred             CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        161 GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       161 GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                              ..|..    ++   |+ -|..+++.+...      .-...+|+..+|+.+-+++|+.
T Consensus       204 --------~~f~~----i~---~~-~K~~~~~~l~~~------~~~~~vGDs~~Di~~a~~ag~~  246 (287)
T 3a1c_A          204 --------LVIAE----VL---PH-QKSEEVKKLQAK------EVVAFVGDGINDAPALAQADLG  246 (287)
T ss_dssp             --------EEECS----CC---TT-CHHHHHHHHTTT------CCEEEEECTTTCHHHHHHSSEE
T ss_pred             --------eeeee----cC---hH-HHHHHHHHHhcC------CeEEEEECCHHHHHHHHHCCee
Confidence                    12211    11   21 256666665432      1267889999999999999994

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=92.94  E-value=0.5  Score=42.94  Aligned_cols=130  Identities=18%  Similarity=0.213  Sum_probs=73.1

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      .+|+.++.+.++++|+++..+|+.+.+....++..++.     .++..  .   -+..+.  ..++...+|+   -+.+.
T Consensus       101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~-----~~l~~--~---f~~~~~--~~~~~~~kp~---~~~~~  165 (235)
T 2om6_A          101 LEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLER-----FGLME--F---IDKTFF--ADEVLSYKPR---KEMFE  165 (235)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-----TTCGG--G---CSEEEE--HHHHTCCTTC---HHHHH
T ss_pred             CccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHh-----CCcHH--H---hhhhee--ccccCCCCCC---HHHHH
Confidence            46888889999999999999999874335556667766     33321  0   011111  1233334442   23333


Q ss_pred             HHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCCCCEEEEcCCCcee--ccccccccccHHhHHhhhhhcC
Q psy12533        193 DIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRGEVK--HEMTQTFQSTYSNMSYLVDQMF  261 (567)
Q Consensus       193 ~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g~~~--~~~~~~~~~sY~~l~~~vd~~f  261 (567)
                      .+.+.+.-...- ...||+.. +|+.+=+++|+..   ..++..+...  .........+...|.+++..+.
T Consensus       166 ~~~~~lgi~~~~-~~~iGD~~~nDi~~a~~aG~~~---~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~  233 (235)
T 2om6_A          166 KVLNSFEVKPEE-SLHIGDTYAEDYQGARKVGMWA---VWINQEGDKVRKLEERGFEIPSIANLKDVIELIS  233 (235)
T ss_dssp             HHHHHTTCCGGG-EEEEESCTTTTHHHHHHTTSEE---EEECTTCCSCEEEETTEEEESSGGGHHHHHHHTC
T ss_pred             HHHHHcCCCccc-eEEECCChHHHHHHHHHCCCEE---EEECCCCCCcccCCCCcchHhhHHHHHHHHHHHh
Confidence            444444322223 56899998 9999999999853   3444432110  0111123456666666665543

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=92.24  E-value=0.19  Score=45.45  Aligned_cols=38  Identities=13%  Similarity=0.176  Sum_probs=28.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcc--cchHHHHHHHHh
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAI--GQSRVTREYLQS  425 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi--~qa~~Tr~~L~~  425 (567)
                      .-||+.++.+.++++ |++-.+|++..  .....++.||..
T Consensus        70 ~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~  109 (180)
T 3bwv_A           70 VMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLE  109 (180)
T ss_dssp             BCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHH
Confidence            457999999999985 99999999842  123467888876

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=91.37  E-value=0.32  Score=44.80  Aligned_cols=30  Identities=3%  Similarity=-0.022  Sum_probs=22.3

Q ss_pred             cchhHHHHHHHHHHC-CceEEEEccCcccch
Q psy12533        387 AQNGVTRLFTKIKEN-GYKLLYLSARAIGQS  416 (567)
Q Consensus       387 ~h~Gva~l~~~i~~n-GY~iiYLSaRpi~qa  416 (567)
                      ..||+.++.+.++++ ||++..+|+++...+
T Consensus        76 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~  106 (197)
T 1q92_A           76 PLPGAVEAVKEMASLQNTDVFICTSPIKMFK  106 (197)
T ss_dssp             BCTTHHHHHHHHHHSTTEEEEEEECCCSCCS
T ss_pred             cCcCHHHHHHHHHhcCCCeEEEEeCCccchH
Confidence            356888888888888 888888888765443

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=91.34  E-value=0.25  Score=44.67  Aligned_cols=37  Identities=14%  Similarity=0.179  Sum_probs=27.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcc--cchHHHHHHHHh
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAI--GQSRVTREYLQS  150 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi--~~a~~Tr~~L~~  150 (567)
                      -+||.++.+.++++ |++-.+|++..  .....++.||..
T Consensus        71 ~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~  109 (180)
T 3bwv_A           71 MPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLE  109 (180)
T ss_dssp             CTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHH
Confidence            46999999999985 99999999842  123466778866

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=91.09  E-value=0.026  Score=57.00  Aligned_cols=30  Identities=20%  Similarity=0.314  Sum_probs=22.4

Q ss_pred             EEecCCCcccHHhHHHc----CCCCCCEEEEcCCCccc
Q psy12533        481 YAGYGNKVNDVWSYQAV----GIPLSRIFTINSRGEVK  514 (567)
Q Consensus       481 ~agfGNr~tDv~aY~~v----GIp~~rIF~In~~g~~~  514 (567)
                      ..+||+..||+.|-+.+    |+.   | .+|..-+++
T Consensus       224 via~GDs~NDi~ml~~A~~~~g~~---v-amna~~~lk  257 (332)
T 1y8a_A          224 PVVVGDSISDYKMFEAARGLGGVA---I-AFNGNEYAL  257 (332)
T ss_dssp             CEEEECSGGGHHHHHHHHHTTCEE---E-EESCCHHHH
T ss_pred             EEEEeCcHhHHHHHHHHhhcCCeE---E-EecCCHHHH
Confidence            56999999999999999    985   3 336554443

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=90.99  E-value=0.81  Score=47.04  Aligned_cols=118  Identities=16%  Similarity=0.137  Sum_probs=66.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCch-------hhhhhhhhhccCh--
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSL-------LNAFHTEVIEKKP--  183 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l-------~~al~REvi~k~p--  183 (567)
                      .+++.+|++.+++||+++.-|||.+.   +.+|-|-..+ .-|+++|+--|+-+.-.+       ......|+.+-+.  
T Consensus       145 ~~~~~~l~~~l~~~G~~v~ivSas~~---~~v~~~a~~~-~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~  220 (327)
T 4as2_A          145 FSGQRELYNKLMENGIEVYVISAAHE---ELVRMVAADP-RYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDP  220 (327)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHTCG-GGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred             CHHHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHhhc-ccccCCCHHHeEeeeeeeeccccccccccccccccccccc
Confidence            45789999999999999999999554   4446655432 225889976666432110       0001112222111  


Q ss_pred             ------------------hHHHHHHHHHHHHhCCCCCCCEEEecCCc-ccchhhhhhcCCCCCCEEEEcCCCce
Q psy12533        184 ------------------QEFKISCLRDIMALFPPNTQPFYAGYGNK-VNDVWSYQAVGIPLSRIFTINSRGEV  238 (567)
Q Consensus       184 ------------------~~fKi~~L~~i~~lf~~~~~pf~agfGNr-~tDv~aY~~vGIp~~rIF~In~~g~~  238 (567)
                                        ..=|...++...   ..++.|+. +|||. ..|..|-...-=..+=-++||.+...
T Consensus       221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i---~~g~~Pi~-a~Gns~dgD~~ML~~~~~~~~~~L~in~~~~~  290 (327)
T 4as2_A          221 KANLDLEVTPYLWTPATWMAGKQAAILTYI---DRWKRPIL-VAGDTPDSDGYMLFNGTAENGVHLWVNRKAKY  290 (327)
T ss_dssp             GGGTTCEEEEEECSSCSSTHHHHHHHHHHT---CSSCCCSE-EEESCHHHHHHHHHHTSCTTCEEEEECCCHHH
T ss_pred             cccccccccccccccccccCccHHHHHHHH---hhCCCCeE-EecCCCCCCHHHHhccccCCCeEEEEecCCch
Confidence                              123666655433   34467855 67776 67988774432122334677776443

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=90.88  E-value=0.32  Score=44.81  Aligned_cols=29  Identities=3%  Similarity=-0.026  Sum_probs=22.2

Q ss_pred             chhHHHHHHHHHHC-CceEEEEccCcccch
Q psy12533        113 QNGVTRLFTKIKEN-GYKLLYLSARAIGQS  141 (567)
Q Consensus       113 h~GVa~Ly~~i~~n-GY~ilYLSaRpi~~a  141 (567)
                      .+|+.++.+.++++ ||++..+|+++-...
T Consensus        77 ~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~  106 (197)
T 1q92_A           77 LPGAVEAVKEMASLQNTDVFICTSPIKMFK  106 (197)
T ss_dssp             CTTHHHHHHHHHHSTTEEEEEEECCCSCCS
T ss_pred             CcCHHHHHHHHHhcCCCeEEEEeCCccchH
Confidence            35888888888888 888888888765443

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=90.69  E-value=0.027  Score=56.82  Aligned_cols=39  Identities=10%  Similarity=0.042  Sum_probs=30.9

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAI  138 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi  138 (567)
                      -|+|+||+||||+.++..                 +...+...+|.+++.+|+|+.
T Consensus        21 ~kli~fDlDGTLld~~~~-----------------~~l~~~~~~g~~~~~~tGR~~   59 (332)
T 1y8a_A           21 GHMFFTDWEGPWILTDFA-----------------LELCMAVFNNARFFSNLSEYD   59 (332)
T ss_dssp             CCEEEECSBTTTBCCCHH-----------------HHHHHHHHCCHHHHHHHHHHH
T ss_pred             ceEEEEECcCCCcCccHH-----------------HHHHHHHHCCCEEEEEcCCCc
Confidence            479999999999998631                 345567788988888899875

>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10

Probab=90.46  E-value=0.72  Score=44.35  Aligned_cols=65  Identities=18%  Similarity=0.213  Sum_probs=48.5

Q ss_pred             EEEecCCccccCCcccc--c-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhccc
Q psy12533         86 VISDIDGTITKSDVLGH--V-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQ  153 (567)
Q Consensus        86 VISDIDGTITkSD~lG~--i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q  153 (567)
                      -.-|.||+|+-+|..|.  + +-....+|+-.      ..++++.++++.|.+++-+|.-+   .+..+.|++.+++
T Consensus        15 ~l~~~~G~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~---~~~~~~~~~~i~~   88 (224)
T 1prx_A           15 EANTTVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDS---VEDHLAWSKDINA   88 (224)
T ss_dssp             EEEETTEEEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSC---HHHHHHHHHHHHH
T ss_pred             EEecCCCCEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHHHH
Confidence            44578898988998886  3 43446778754      66688889999999999999754   3456788887665

>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}

Probab=89.90  E-value=2.4  Score=38.06  Aligned_cols=76  Identities=16%  Similarity=0.327  Sum_probs=50.7

Q ss_pred             EEEec--CC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCc------eEEEEccCcccchHHHHHHHH
Q psy12533         86 VISDI--DG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGY------KLLYLSARAIGQSRVTREYLQ  149 (567)
Q Consensus        86 VISDI--DG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY------~ilYLSaRpi~~a~~Tr~~L~  149 (567)
                      -+-|+  || +++.++..|.. +-.+...|..+      -+.+++.++.++|.      .|+.++.... ..+..+.|++
T Consensus        41 ~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~-~~~~~~~~~~  119 (183)
T 3lwa_A           41 GGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY-SRDIAQDFVT  119 (183)
T ss_dssp             EEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC-CHHHHHHHHH
T ss_pred             eccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCC-CHHHHHHHHH
Confidence            45567  77 46667777754 33344567543      56678899999999      9999988642 4566788887


Q ss_pred             hcccCCccCCCCceecCCC
Q psy12533        150 SVKQEDLTLPEGPMLLNPT  168 (567)
Q Consensus       150 ~~~q~~~~LP~GPlllsp~  168 (567)
                      .     ++++ .|++..++
T Consensus       120 ~-----~~~~-~~~~~d~~  132 (183)
T 3lwa_A          120 D-----NGLD-YPSIYDPP  132 (183)
T ss_dssp             H-----TTCC-SCEEECTT
T ss_pred             H-----cCCC-ccEEECCc
Confidence            7     6665 56665544

>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A

Probab=89.82  E-value=1.9  Score=37.85  Aligned_cols=72  Identities=18%  Similarity=0.218  Sum_probs=50.1

Q ss_pred             EEecCC-ccccCCccccc-ccccc-ccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         87 ISDIDG-TITKSDVLGHV-LPIMG-KDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        87 ISDIDG-TITkSD~lG~i-l~~lG-kDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      ..|.|| +++.++..|.. +-.+. ..|..+      ...+++.++++.|..|+-+|.-   -.+..+.|++.     ++
T Consensus        20 l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d---~~~~~~~~~~~-----~~   91 (163)
T 3gkn_A           20 LSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD---SVKSHDNFCAK-----QG   91 (163)
T ss_dssp             EECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHH-----HC
T ss_pred             ccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHH-----hC
Confidence            457887 78888888873 22233 366543      5678899999999999999984   45667888887     55


Q ss_pred             CCCCceecCC
Q psy12533        158 LPEGPMLLNP  167 (567)
Q Consensus       158 LP~GPlllsp  167 (567)
                      ++ -|++.-+
T Consensus        92 ~~-~~~~~d~  100 (163)
T 3gkn_A           92 FA-FPLVSDG  100 (163)
T ss_dssp             CS-SCEEECT
T ss_pred             CC-ceEEECC
Confidence            54 4566443

>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}

Probab=89.13  E-value=1.2  Score=40.66  Aligned_cols=72  Identities=13%  Similarity=0.092  Sum_probs=49.7

Q ss_pred             EEecCC-ccccCCccccc-ccccc-ccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         87 ISDIDG-TITKSDVLGHV-LPIMG-KDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        87 ISDIDG-TITkSD~lG~i-l~~lG-kDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      .-|.|| +++-+|..|.. +-.+. ..|.-+      ...+++.++++.|..|+.+|.-   -.+..+.|++.     ++
T Consensus        36 l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D---~~~~~~~~~~~-----~~  107 (179)
T 3ixr_A           36 LMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD---SVKSHDSFCAK-----QG  107 (179)
T ss_dssp             EEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC---CHHHHHHHHHH-----HT
T ss_pred             EECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHH-----cC
Confidence            347788 58888888873 22233 556543      6678899999999999999864   34667888887     55


Q ss_pred             CCCCceecCC
Q psy12533        158 LPEGPMLLNP  167 (567)
Q Consensus       158 LP~GPlllsp  167 (567)
                      ++ -|++.-+
T Consensus       108 ~~-f~~l~D~  116 (179)
T 3ixr_A          108 FT-FPLVSDS  116 (179)
T ss_dssp             CC-SCEEECT
T ss_pred             Cc-eEEEECC
Confidence            54 3566543

>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A

Probab=88.77  E-value=0.97  Score=43.34  Aligned_cols=77  Identities=12%  Similarity=0.159  Sum_probs=53.1

Q ss_pred             EEec--CCccccCCcccc--c-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-
Q psy12533         87 ISDI--DGTITKSDVLGH--V-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-  154 (567)
Q Consensus        87 ISDI--DGTITkSD~lG~--i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~-  154 (567)
                      .-|.  +|+|+-+|..|.  + +-....+|+-.      ..++++.++++.|.+++-+|.-+   ....+.|++.+++. 
T Consensus        14 l~~~~~~G~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~---~~~~~~~~~~i~~~~   90 (220)
T 1xcc_A           14 AKASGIDGDFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNS---KESHDKWIEDIKYYG   90 (220)
T ss_dssp             ECBTTCSSCEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSC---HHHHHHHHHHHHHHH
T ss_pred             eecccCCCcEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCC---HHHHHHHHHHHHHHh
Confidence            3456  888988998887  3 33446788753      56678888999999999999754   34567888866542 


Q ss_pred             -CccCCCCceecCC
Q psy12533        155 -DLTLPEGPMLLNP  167 (567)
Q Consensus       155 -~~~LP~GPlllsp  167 (567)
                       +++++ -|++.-+
T Consensus        91 ~~~~~~-fpil~D~  103 (220)
T 1xcc_A           91 KLNKWE-IPIVCDE  103 (220)
T ss_dssp             TCSCCC-CCEEECT
T ss_pred             cCCCCc-ceeEECc
Confidence             35554 3566544

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=88.75  E-value=0.73  Score=52.45  Aligned_cols=105  Identities=15%  Similarity=0.239  Sum_probs=72.9

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  436 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G  436 (567)
                      +..++.+.+||++.     |-+   .=.|..++++.+..+.++++|++++-+|+|+..-+.   ...+.     .++.. 
T Consensus       533 G~~vl~va~d~~~~-----G~i---~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~---~ia~~-----lgi~~-  595 (736)
T 3rfu_A          533 GASVMFMAVDGKTV-----ALL---VVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAE---AVAGT-----LGIKK-  595 (736)
T ss_dssp             TCEEEEEEETTEEE-----EEE---EEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHH---HHHHH-----HTCCC-
T ss_pred             CCeEEEEEECCEEE-----EEE---EeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHH---HHHHH-----cCCCE-
Confidence            34566677787653     322   116888999999999999999999999999876653   33334     33321 


Q ss_pred             ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        437 PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       437 Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                              .+.    +   -.| .-|.+.++.++.-    .. .++.+|+-.||+.|-+++||
T Consensus       596 --------v~a----~---~~P-~~K~~~v~~l~~~----g~-~V~~vGDG~ND~paL~~Adv  637 (736)
T 3rfu_A          596 --------VVA----E---IMP-EDKSRIVSELKDK----GL-IVAMAGDGVNDAPALAKADI  637 (736)
T ss_dssp             --------EEC----S---CCH-HHHHHHHHHHHHH----SC-CEEEEECSSTTHHHHHHSSE
T ss_pred             --------EEE----e---cCH-HHHHHHHHHHHhc----CC-EEEEEECChHhHHHHHhCCE
Confidence                    110    1   134 3488999998872    22 37899999999999998765

>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}

Probab=88.66  E-value=1.1  Score=43.64  Aligned_cols=58  Identities=9%  Similarity=0.099  Sum_probs=41.7

Q ss_pred             ccccCCccccc--ccccCcCCcc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhccc
Q psy12533        368 TITKSDVLGHV--LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQ  428 (567)
Q Consensus       368 TiTkSD~~G~~--~~~~GkDw~h------~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q  428 (567)
                      +++.||..|..  +-....+|+-      +...+++.++++.|..|+-+|.-+   ....++|++....
T Consensus        69 ~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~---~~~~~~~~~~~~~  134 (240)
T 3qpm_A           69 ELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDS---QFTHLAWIITPRK  134 (240)
T ss_dssp             EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSC---HHHHHHHHHSCGG
T ss_pred             EEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCC---HHHHHHHHHHHHh
Confidence            67778887763  2233336753      477789999999999999999754   4567889987544

>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A

Probab=88.36  E-value=1.3  Score=43.01  Aligned_cols=77  Identities=25%  Similarity=0.321  Sum_probs=53.1

Q ss_pred             EEecCCccccCCcccc--c-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-Cc
Q psy12533         87 ISDIDGTITKSDVLGH--V-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DL  156 (567)
Q Consensus        87 ISDIDGTITkSD~lG~--i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~-~~  156 (567)
                      .-|.||+|+-+|..|.  + +-....+|+-.      ..++++.++++.|.+|+-+|.-+   ....++|++.+++. ++
T Consensus        14 l~~~~G~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~---~~~~~~~~~~i~~~~~~   90 (233)
T 2v2g_A           14 ADSTIGKLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDN---VADHKEWSEDVKCLSGV   90 (233)
T ss_dssp             EEETTCCEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSC---HHHHHHHHHHHHHHHTC
T ss_pred             EecCCCCEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHHHHhhCc
Confidence            4578899999998886  2 43345788753      56678888999999999999754   35567888866542 23


Q ss_pred             --cCCCCceecCC
Q psy12533        157 --TLPEGPMLLNP  167 (567)
Q Consensus       157 --~LP~GPlllsp  167 (567)
                        +++ -|++.-+
T Consensus        91 ~~~~~-fpil~D~  102 (233)
T 2v2g_A           91 KGDMP-YPIIADE  102 (233)
T ss_dssp             CSSCS-SCEEECT
T ss_pred             ccCCc-eEEEECC
Confidence              443 2566443

>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10

Probab=87.52  E-value=0.76  Score=44.21  Aligned_cols=65  Identities=18%  Similarity=0.226  Sum_probs=47.0

Q ss_pred             EEEecCCccccCCcccc--c-ccccCcCCcc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhccc
Q psy12533        361 VISDIDGTITKSDVLGH--V-LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQ  428 (567)
Q Consensus       361 VIsDIDGTiTkSD~~G~--~-~~~~GkDw~h------~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q  428 (567)
                      -+-|.||+++-+|..|.  + +-....+|+-      +..++++.++++.|.+||-+|.-+   ....++|++.+++
T Consensus        15 ~l~~~~G~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~---~~~~~~~~~~i~~   88 (224)
T 1prx_A           15 EANTTVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDS---VEDHLAWSKDINA   88 (224)
T ss_dssp             EEEETTEEEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSC---HHHHHHHHHHHHH
T ss_pred             EEecCCCCEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHHHH
Confidence            34577888888888886  2 3334677753      366688888999999999999754   3456788887655

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=87.24  E-value=1.2  Score=40.10  Aligned_cols=101  Identities=13%  Similarity=0.190  Sum_probs=59.8

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~  464 (567)
                      ..+|+.+++..++++|+++..+|+.     ...+.++..     .++..  -.++. .+..      ....++|+.|+. 
T Consensus        92 ~~~~~~~~l~~l~~~g~~~~i~t~~-----~~~~~~l~~-----~~l~~~f~~~~~-~~~~------~~~Kp~~~~~~~-  153 (221)
T 2wf7_A           92 VYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLER-----MNLTGYFDAIAD-PAEV------AASKPAPDIFIA-  153 (221)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCCC-----TTHHHHHHH-----TTCGGGCSEECC-TTTS------SSCTTSSHHHHH-
T ss_pred             CCCCHHHHHHHHHHCCCeEEEEcCc-----HHHHHHHHH-----cChHHHcceEec-cccC------CCCCCChHHHHH-
Confidence            4689999999999999999999987     234556655     22221  01111 1111      011233445543 


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  513 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  513 (567)
                          +...++-.... ...||+..+|+.+-+++|+.   +..+|...++
T Consensus       154 ----~~~~lgi~~~~-~i~iGD~~nDi~~a~~aG~~---~~~~~~~~~~  194 (221)
T 2wf7_A          154 ----AAHAVGVAPSE-SIGLEDSQAGIQAIKDSGAL---PIGVGRPEDL  194 (221)
T ss_dssp             ----HHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE---EEEESCHHHH
T ss_pred             ----HHHHcCCChhH-eEEEeCCHHHHHHHHHCCCE---EEEECCHHHh
Confidence                22222222223 45899999999999999996   4455654333

>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}

Probab=87.14  E-value=1.6  Score=37.45  Aligned_cols=70  Identities=10%  Similarity=0.030  Sum_probs=40.3

Q ss_pred             ecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533         89 DIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  160 (567)
Q Consensus        89 DIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~  160 (567)
                      |+|| +++.++..|.. +-.+...|.-+      -..+++.++++.|..|+.+|.-+.  .+..++|++.     ++++-
T Consensus        19 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~--~~~~~~~~~~-----~~~~~   91 (143)
T 4fo5_A           19 LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEK--ESIFTETVKI-----DKLDL   91 (143)
T ss_dssp             -----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSC--HHHHHHHHHH-----HTCCG
T ss_pred             cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCC--HHHHHHHHHH-----hCCCC
Confidence            5566 56777777764 22334456544      344566666667899999987643  4566777776     56652


Q ss_pred             Cceec
Q psy12533        161 GPMLL  165 (567)
Q Consensus       161 GPlll  165 (567)
                      -|++.
T Consensus        92 ~~~~~   96 (143)
T 4fo5_A           92 STQFH   96 (143)
T ss_dssp             GGEEE
T ss_pred             ceeee
Confidence            24443

>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}

Probab=86.97  E-value=3.4  Score=35.00  Aligned_cols=74  Identities=9%  Similarity=0.065  Sum_probs=47.1

Q ss_pred             EecCC-ccccCCccccc-cccccccccc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533         88 SDIDG-TITKSDVLGHV-LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP  159 (567)
Q Consensus        88 SDIDG-TITkSD~lG~i-l~~lGkDwth------~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP  159 (567)
                      -|+|| +++.++..|.. +-.+...|..      +.+.+++.++.+.|..|+.++.-.  ..+..+.|++.     ++++
T Consensus        17 ~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~--~~~~~~~~~~~-----~~~~   89 (148)
T 3hcz_A           17 TDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIER--KDEEWLKFIRS-----KKIG   89 (148)
T ss_dssp             BCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCS--SSHHHHHHHHH-----HTCT
T ss_pred             ecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecC--CHHHHHHHHHH-----cCCC
Confidence            34555 45555555543 2222333433      367788888888899999998853  33467888887     7777


Q ss_pred             CCceecCCC
Q psy12533        160 EGPMLLNPT  168 (567)
Q Consensus       160 ~GPlllsp~  168 (567)
                      ..|++..++
T Consensus        90 ~~~~~~d~~   98 (148)
T 3hcz_A           90 GWLNVRDSK   98 (148)
T ss_dssp             TSEEEECTT
T ss_pred             CceEEeccc
Confidence            677776554

>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A

Probab=86.74  E-value=3.5  Score=35.79  Aligned_cols=65  Identities=17%  Similarity=0.289  Sum_probs=44.9

Q ss_pred             EEEecCC-ccccCCccccc-cccccccccch-------hHHHHHHHHHH----CCceEEEEccCccc-chHHHHHHHHh
Q psy12533         86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQN-------GVTRLFTKIKE----NGYKLLYLSARAIG-QSRVTREYLQS  150 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i-l~~lGkDwth~-------GVa~Ly~~i~~----nGY~ilYLSaRpi~-~a~~Tr~~L~~  150 (567)
                      -+-|.|| +++.++..|.. +-.+...|.-+       ...+++.++.+    .+..|+.+|.-+.. ..+..+.|++.
T Consensus         7 ~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~   85 (164)
T 2ggt_A            7 SLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKE   85 (164)
T ss_dssp             EEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHT
T ss_pred             EEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHH
Confidence            4568888 67778888865 32334456553       45577888887    48999999986532 35677888887

>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A

Probab=86.47  E-value=6.1  Score=34.71  Aligned_cols=80  Identities=15%  Similarity=0.225  Sum_probs=50.4

Q ss_pred             EEEecCC-ccccCCccccc-cccccccccc-------hhHHHHHHHHHHCC--ceEEEEccCcc-cchHHHHHHHHhccc
Q psy12533         86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQ-------NGVTRLFTKIKENG--YKLLYLSARAI-GQSRVTREYLQSVKQ  153 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i-l~~lGkDwth-------~GVa~Ly~~i~~nG--Y~ilYLSaRpi-~~a~~Tr~~L~~~~q  153 (567)
                      -+-|.|| +++-++..|.. +-.+...|..       +...+++.++.+.|  ..|+.+|.-+. .-.+..+.|++.   
T Consensus        17 ~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~---   93 (174)
T 1xzo_A           17 TFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAAN---   93 (174)
T ss_dssp             EEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTT---
T ss_pred             EEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHH---
Confidence            3457777 56777777764 2223344433       46778999999988  99999997643 234566778766   


Q ss_pred             CCccCCCCceecCCC
Q psy12533        154 EDLTLPEGPMLLNPT  168 (567)
Q Consensus       154 ~~~~LP~GPlllsp~  168 (567)
                      .+..+|..|++..++
T Consensus        94 ~~~~~~~~~~l~d~~  108 (174)
T 1xzo_A           94 YPLSFDNWDFLTGYS  108 (174)
T ss_dssp             SCCCGGGEEEEBCSC
T ss_pred             cCCCCcceEEEeCCC
Confidence            233344446665543

>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0

Probab=86.26  E-value=5.7  Score=35.00  Aligned_cols=72  Identities=15%  Similarity=0.173  Sum_probs=49.9

Q ss_pred             EEEecCC-ccccCCccccc--ccccc-ccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC
Q psy12533         86 VISDIDG-TITKSDVLGHV--LPIMG-KDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED  155 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i--l~~lG-kDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~  155 (567)
                      -+-|.|| +++.++..|..  +-.+. ..|..+      ...+++.++++.|..|+.+|.-   -.+..+.|++.     
T Consensus        12 ~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d---~~~~~~~~~~~-----   83 (161)
T 3drn_A           12 EGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD---DINSHKRFKEK-----   83 (161)
T ss_dssp             EEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC---CHHHHHHHHHH-----
T ss_pred             EeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC---CHHHHHHHHHH-----
Confidence            4457888 47778887763  33344 566544      5667888899899999999884   35677888887     


Q ss_pred             ccCCCCceecC
Q psy12533        156 LTLPEGPMLLN  166 (567)
Q Consensus       156 ~~LP~GPllls  166 (567)
                      ++++ -|++.-
T Consensus        84 ~~~~-~~~~~d   93 (161)
T 3drn_A           84 YKLP-FILVSD   93 (161)
T ss_dssp             TTCC-SEEEEC
T ss_pred             hCCC-ceEEEC
Confidence            6665 555543

>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}

Probab=86.09  E-value=3.7  Score=35.24  Aligned_cols=75  Identities=19%  Similarity=0.397  Sum_probs=45.4

Q ss_pred             EEEEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533         85 IVISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  156 (567)
Q Consensus        85 iVISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~  156 (567)
                      ..+-|.|| +++.++..|.. +-.+...|...      -+.+++.++.+.|..|+.++..+. .....+.|++.     +
T Consensus        11 ~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~-----~   84 (154)
T 3kcm_A           11 FTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEG-GKVAVEEFFRK-----T   84 (154)
T ss_dssp             CEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTT-HHHHHHHHHHH-----H
T ss_pred             eEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCc-chHHHHHHHHH-----c
Confidence            34557777 46666666653 33344556543      445666666667899999988654 24566777776     5


Q ss_pred             cCCCCceecC
Q psy12533        157 TLPEGPMLLN  166 (567)
Q Consensus       157 ~LP~GPllls  166 (567)
                      +++ .|++..
T Consensus        85 ~~~-~~~~~d   93 (154)
T 3kcm_A           85 GFT-LPVLLD   93 (154)
T ss_dssp             CCC-CCEEEC
T ss_pred             CCC-eeEEec
Confidence            554 455543

>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C

Probab=85.92  E-value=1.2  Score=43.84  Aligned_cols=58  Identities=7%  Similarity=0.107  Sum_probs=40.0

Q ss_pred             ccccCCccccc-ccccC-cCCc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhccc
Q psy12533        368 TITKSDVLGHV-LPIMG-KDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQ  428 (567)
Q Consensus       368 TiTkSD~~G~~-~~~~G-kDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q  428 (567)
                      +++.+|..|.. +-... .+|+      -+...+++.++++.|..|+-+|.-+   ...+++|++...+
T Consensus        83 ~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~---~~~~~~~~~~~~~  148 (254)
T 3tjj_A           83 ELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDS---QFTHLAWINTPRR  148 (254)
T ss_dssp             EEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSC---HHHHHHHHTSCGG
T ss_pred             EEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHHHH
Confidence            56777777763 21222 4553      3467788999999999999999643   4567888887544

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=85.87  E-value=1  Score=42.72  Aligned_cols=125  Identities=14%  Similarity=0.201  Sum_probs=71.6

Q ss_pred             CCCeEEEEecCCccccCCcccc-----ccc--ccCc--C---CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533        356 WNDKIVISDIDGTITKSDVLGH-----VLP--IMGK--D---WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  423 (567)
Q Consensus       356 ~~~kiVIsDIDGTiTkSD~~G~-----~~~--~~Gk--D---w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L  423 (567)
                      ...+++|.|+||||-.|...-.     +++  .-|+  .   ..+||+.++...++++ |++.-.|+-+...++..-+.|
T Consensus        26 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~l  104 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLL  104 (195)
T ss_dssp             TTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH
T ss_pred             CCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHh
Confidence            3578899999999998853211     010  0111  1   2489999999999999 999999998877665444433


Q ss_pred             HhcccCCccCCCCceecCCCchhh-hhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCC
Q psy12533        424 QSVKQEDLTLPEGPMLLNPTSLLN-AFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLS  502 (567)
Q Consensus       424 ~~~~Q~~~~lP~GPvl~spd~l~~-al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~  502 (567)
                      .         |.+        .|. -+.||-....    |-.+++++..+-..-.+  ..-+||+..++.+-.++||+..
T Consensus       105 d---------~~~--------~f~~~l~rd~~~~~----k~~~lK~L~~Lg~~~~~--~vivDDs~~~~~~~~~ngi~i~  161 (195)
T 2hhl_A          105 D---------RWG--------VFRARLFRESCVFH----RGNYVKDLSRLGRELSK--VIIVDNSPASYIFHPENAVPVQ  161 (195)
T ss_dssp             C---------CSS--------CEEEEECGGGCEEE----TTEEECCGGGSSSCGGG--EEEEESCGGGGTTCGGGEEECC
T ss_pred             C---------Ccc--------cEEEEEEcccceec----CCceeeeHhHhCCChhH--EEEEECCHHHhhhCccCccEEe
Confidence            1         112        111 1233322211    11123444333111122  3467777777777777777764


Q ss_pred             CE
Q psy12533        503 RI  504 (567)
Q Consensus       503 rI  504 (567)
                      ..
T Consensus       162 ~~  163 (195)
T 2hhl_A          162 SW  163 (195)
T ss_dssp             CC
T ss_pred             ee
Confidence            43

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=85.83  E-value=1.1  Score=42.60  Aligned_cols=66  Identities=18%  Similarity=0.307  Sum_probs=46.4

Q ss_pred             CCcEEEEecCCccccCCcccc-----ccc--cccc-----cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533         82 NDKIVISDIDGTITKSDVLGH-----VLP--IMGK-----DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  148 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~-----il~--~lGk-----Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L  148 (567)
                      ..+++|.|+||||..|...-.     +++  .-|+     -..+||+.++...+++. |++.-.|+.+...++..-+.|
T Consensus        27 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~l  104 (195)
T 2hhl_A           27 GKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLL  104 (195)
T ss_dssp             TCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH
T ss_pred             CCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHh
Confidence            456899999999998853210     010  0111     13478999999999999 999999998777665554444

>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}

Probab=85.76  E-value=3  Score=37.89  Aligned_cols=74  Identities=18%  Similarity=0.263  Sum_probs=48.2

Q ss_pred             EEEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCc-----ccchHHHHHHHHhcc
Q psy12533         86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARA-----IGQSRVTREYLQSVK  152 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRp-----i~~a~~Tr~~L~~~~  152 (567)
                      -+-|+|| +++.++..|.. +-.+...|.-+      ...+++.++++.|..|+-+|...     -.-.+..++|++.  
T Consensus        33 ~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~--  110 (185)
T 2gs3_A           33 SAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAG--  110 (185)
T ss_dssp             EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHH--
T ss_pred             eeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHH--
Confidence            4557788 67777777764 32334456542      45678888888899999998753     1234567888876  


Q ss_pred             cCCccCCCCceec
Q psy12533        153 QEDLTLPEGPMLL  165 (567)
Q Consensus       153 q~~~~LP~GPlll  165 (567)
                         ++++ -|++.
T Consensus       111 ---~~~~-~p~~~  119 (185)
T 2gs3_A          111 ---YNVK-FDMFS  119 (185)
T ss_dssp             ---TTCC-SEEBC
T ss_pred             ---cCCC-Ceeee
Confidence               5554 45553

>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A

Probab=85.44  E-value=7.1  Score=34.27  Aligned_cols=79  Identities=15%  Similarity=0.221  Sum_probs=48.2

Q ss_pred             EEecCC-ccccCCccccc-ccccCcCCc-------chhHHHHHHHHHHCC--ceEEEEccCcc-cchHHHHHHHHhcccC
Q psy12533        362 ISDIDG-TITKSDVLGHV-LPIMGKDWA-------QNGVTRLFTKIKENG--YKLLYLSARAI-GQSRVTREYLQSVKQE  429 (567)
Q Consensus       362 IsDIDG-TiTkSD~~G~~-~~~~GkDw~-------h~Gva~l~~~i~~nG--Y~iiYLSaRpi-~qa~~Tr~~L~~~~Q~  429 (567)
                      +-|.|| +++.++..|.. +-.....|.       .+...+++.++.++|  ..|+.+|.-+. .-.+..++|++.   .
T Consensus        18 l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~---~   94 (174)
T 1xzo_A           18 FQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAAN---Y   94 (174)
T ss_dssp             EECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTT---S
T ss_pred             EEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHH---c
Confidence            346666 45566666653 222233442       356778999999998  99999997643 234556777765   3


Q ss_pred             CccCCCCceecCCC
Q psy12533        430 DLTLPEGPMLLNPT  443 (567)
Q Consensus       430 ~~~lP~GPvl~spd  443 (567)
                      +..+|..|++..++
T Consensus        95 ~~~~~~~~~l~d~~  108 (174)
T 1xzo_A           95 PLSFDNWDFLTGYS  108 (174)
T ss_dssp             CCCGGGEEEEBCSC
T ss_pred             CCCCcceEEEeCCC
Confidence            34444446665443

>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}

Probab=85.34  E-value=3.4  Score=35.76  Aligned_cols=73  Identities=12%  Similarity=0.105  Sum_probs=45.5

Q ss_pred             EEEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      .+-|+|| +++.++..|.. +-.+...|.-+      .+.+++.++.+.|..|+.++...  -.+..+.|+..     ++
T Consensus        13 ~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~--~~~~~~~~~~~-----~~   85 (152)
T 2lrn_A           13 TGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDR--REEDWKKAIEE-----DK   85 (152)
T ss_dssp             EEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCS--CHHHHHHHHHH-----HT
T ss_pred             eeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccC--CHHHHHHHHHH-----hC
Confidence            3456777 56667766653 22334556543      45567777777899999998763  23456677766     55


Q ss_pred             CCCCceecC
Q psy12533        158 LPEGPMLLN  166 (567)
Q Consensus       158 LP~GPllls  166 (567)
                      ++ .|++..
T Consensus        86 ~~-~~~~~d   93 (152)
T 2lrn_A           86 SY-WNQVLL   93 (152)
T ss_dssp             CC-SEEEEE
T ss_pred             CC-CeEEec
Confidence            54 455543

>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}

Probab=85.30  E-value=5.7  Score=33.53  Aligned_cols=73  Identities=15%  Similarity=0.193  Sum_probs=42.4

Q ss_pred             EEecCC-ccccC--Cccccc-cccccccccch------hHHHHHHHH-HHCCceEEEEccCcccchHHHHHHHHhcccCC
Q psy12533         87 ISDIDG-TITKS--DVLGHV-LPIMGKDWAQN------GVTRLFTKI-KENGYKLLYLSARAIGQSRVTREYLQSVKQED  155 (567)
Q Consensus        87 ISDIDG-TITkS--D~lG~i-l~~lGkDwth~------GVa~Ly~~i-~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~  155 (567)
                      +-|+|| +++.+  +..|.. +-.+...|..+      -+.+++.++ .+.|..|+.++....  .+..++|++.     
T Consensus        16 l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~--~~~~~~~~~~-----   88 (148)
T 3fkf_A           16 LPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDID--REAWETAIKK-----   88 (148)
T ss_dssp             EEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSC--HHHHHHHHHH-----
T ss_pred             eeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCC--HHHHHHHHHH-----
Confidence            345666 34445  555543 22233445433      455677777 667899999987653  4566777766     


Q ss_pred             ccCCCCceecCC
Q psy12533        156 LTLPEGPMLLNP  167 (567)
Q Consensus       156 ~~LP~GPlllsp  167 (567)
                      +++ ..|++..+
T Consensus        89 ~~~-~~~~~~d~   99 (148)
T 3fkf_A           89 DTL-SWDQVCDF   99 (148)
T ss_dssp             TTC-CSEEECCS
T ss_pred             cCC-CceEEEcc
Confidence            555 35555443

>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A

Probab=84.96  E-value=5.3  Score=34.31  Aligned_cols=125  Identities=18%  Similarity=0.341  Sum_probs=74.9

Q ss_pred             EEEEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533         85 IVISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  156 (567)
Q Consensus        85 iVISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~  156 (567)
                      .-+-|.|| +++.++..|.. +-.+...|..+      -+.+++.++.+.|..|+.++....  .+..+.|++.     +
T Consensus         9 ~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~--~~~~~~~~~~-----~   81 (151)
T 2f9s_A            9 FVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGES--KIAVHNFMKS-----Y   81 (151)
T ss_dssp             CEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCC--HHHHHHHHHH-----H
T ss_pred             ceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC--HHHHHHHHHH-----c
Confidence            34567888 56677777754 33445667643      444667777777899999987542  3566778776     5


Q ss_pred             cCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCC
Q psy12533        157 TLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRG  236 (567)
Q Consensus       157 ~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g  236 (567)
                      +++ .|++..++.                       .+...|.-                     -|+|  .+|+||++|
T Consensus        82 ~~~-~~~~~d~~~-----------------------~~~~~~~v---------------------~~~P--~~~lid~~G  114 (151)
T 2f9s_A           82 GVN-FPVVLDTDR-----------------------QVLDAYDV---------------------SPLP--TTFLINPEG  114 (151)
T ss_dssp             TCC-SCEEEETTS-----------------------HHHHHTTC---------------------CSSC--EEEEECTTS
T ss_pred             CCC-ceEEECCch-----------------------HHHHhcCC---------------------CCCC--eEEEECCCC
Confidence            554 344433211                       11122211                     1444  479999999


Q ss_pred             ceeccccccccccHHhHHhhhhhcCCCCC
Q psy12533        237 EVKHEMTQTFQSTYSNMSYLVDQMFPSSL  265 (567)
Q Consensus       237 ~~~~~~~~~~~~sY~~l~~~vd~~fP~~~  265 (567)
                      ++......  ..+...|.+.++.+.+.-.
T Consensus       115 ~i~~~~~G--~~~~~~l~~~l~~ll~~~~  141 (151)
T 2f9s_A          115 KVVKVVTG--TMTESMIHDYMNLIKPGET  141 (151)
T ss_dssp             EEEEEEES--CCCHHHHHHHHHHHSCC--
T ss_pred             cEEEEEeC--CCCHHHHHHHHHHHHhhhh
Confidence            99775432  2367788888888765444

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=84.83  E-value=1.3  Score=41.33  Aligned_cols=125  Identities=14%  Similarity=0.157  Sum_probs=73.7

Q ss_pred             CCCeEEEEecCCccccCCcccc----c-cc--ccCc--C---CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533        356 WNDKIVISDIDGTITKSDVLGH----V-LP--IMGK--D---WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  423 (567)
Q Consensus       356 ~~~kiVIsDIDGTiTkSD~~G~----~-~~--~~Gk--D---w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L  423 (567)
                      ...+++|.|+||||-.|...-.    + ++  .-|.  .   ..+||+.++...++++ |.+.-.|+-+...++..-+.|
T Consensus        13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~l   91 (181)
T 2ght_A           13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL   91 (181)
T ss_dssp             TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHH
Confidence            3568899999999998753211    0 00  0121  1   2589999999999998 999999998877775554444


Q ss_pred             HhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCC
Q psy12533        424 QSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSR  503 (567)
Q Consensus       424 ~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~r  503 (567)
                      .         |.|- +  ..    -+.||-....    |..+++++..+-....+  ..-+||+..++.+-.+.||+...
T Consensus        92 d---------~~~~-f--~~----~~~rd~~~~~----k~~~~k~L~~Lg~~~~~--~vivdDs~~~~~~~~~ngi~i~~  149 (181)
T 2ght_A           92 D---------KWGA-F--RA----RLFRESCVFH----RGNYVKDLSRLGRDLRR--VLILDNSPASYVFHPDNAVPVAS  149 (181)
T ss_dssp             C---------TTCC-E--EE----EECGGGSEEE----TTEEECCGGGTCSCGGG--EEEECSCGGGGTTCTTSBCCCCC
T ss_pred             C---------CCCc-E--EE----EEeccCceec----CCcEeccHHHhCCCcce--EEEEeCCHHHhccCcCCEeEecc
Confidence            2         1221 0  00    1123322211    11234444443211122  34688888888888888888744

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=84.83  E-value=2  Score=50.56  Aligned_cols=112  Identities=18%  Similarity=0.240  Sum_probs=65.0

Q ss_pred             cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC---------ccCCCCc--------eecCCC---
Q psy12533        384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED---------LTLPEGP--------MLLNPT---  443 (567)
Q Consensus       384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~---------~~lP~GP--------vl~spd---  443 (567)
                      .|..++++.+..++++++|.+++.+|||+..-+...-.-+.-..++.         .+++...        ......   
T Consensus       602 ~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~  681 (1034)
T 3ixz_A          602 IDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK  681 (1034)
T ss_pred             cCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence            68999999999999999999999999998765533222111000000         0000000        000000   


Q ss_pred             -----chhhhhhh--h-hhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        444 -----SLLNAFHT--E-VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       444 -----~l~~al~r--E-vi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                           .+...+.+  + +..+-....|..+.+.++..     ...++++|+-.||+.|-+++||-
T Consensus       682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-----g~~V~a~GDG~ND~~mLk~A~vG  741 (1034)
T 3ixz_A          682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-----GAIVAVTGDGVNDSPALKKADIG  741 (1034)
T ss_pred             hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-----CCEEEEECCcHHhHHHHHHCCee
Confidence                 00000000  0 12222235688888888772     34589999999999999987654

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=84.78  E-value=1.9  Score=49.09  Aligned_cols=105  Identities=15%  Similarity=0.239  Sum_probs=73.1

Q ss_pred             CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  161 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G  161 (567)
                      +..++...+||++.     |-+   .=.|-.++++.+..++++++|++++-+|+|+...+..   ..+.     .++.. 
T Consensus       533 G~~vl~va~d~~~~-----G~i---~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~---ia~~-----lgi~~-  595 (736)
T 3rfu_A          533 GASVMFMAVDGKTV-----ALL---VVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEA---VAGT-----LGIKK-  595 (736)
T ss_dssp             TCEEEEEEETTEEE-----EEE---EEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHH---HHHH-----HTCCC-
T ss_pred             CCeEEEEEECCEEE-----EEE---EeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHH---HHHH-----cCCCE-
Confidence            34567777887653     222   1167889999999999999999999999998766543   3333     23321 


Q ss_pred             ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533        162 PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  224 (567)
Q Consensus       162 Plllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  224 (567)
                              .+.    +   -.| +-|.+.++.++..    .. .++.+|+..||+.|-+++||
T Consensus       596 --------v~a----~---~~P-~~K~~~v~~l~~~----g~-~V~~vGDG~ND~paL~~Adv  637 (736)
T 3rfu_A          596 --------VVA----E---IMP-EDKSRIVSELKDK----GL-IVAMAGDGVNDAPALAKADI  637 (736)
T ss_dssp             --------EEC----S---CCH-HHHHHHHHHHHHH----SC-CEEEEECSSTTHHHHHHSSE
T ss_pred             --------EEE----e---cCH-HHHHHHHHHHHhc----CC-EEEEEECChHhHHHHHhCCE
Confidence                    110    1   133 3488999998875    22 38899999999999988765

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=84.51  E-value=0.86  Score=40.11  Aligned_cols=90  Identities=17%  Similarity=0.209  Sum_probs=53.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccC--hhHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKK--PQEFK  187 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~--p~~fK  187 (567)
                      ..+|+.++.+.++++|+++..+|+.+....   + .++.     .++..  ..++.+.         ++...+  |+.|+
T Consensus        86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~---~-~~~~-----~~~~~~f~~~~~~~---------~~~~~Kp~~~~~~  147 (207)
T 2go7_A           86 LMPGAREVLAWADESGIQQFIYTHKGNNAF---T-ILKD-----LGVESYFTEILTSQ---------SGFVRKPSPEAAT  147 (207)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCTHHH---H-HHHH-----HTCGGGEEEEECGG---------GCCCCTTSSHHHH
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCchHHH---H-HHHH-----cCchhheeeEEecC---------cCCCCCCCcHHHH
Confidence            356899999999999999999999875443   3 3333     11210  0111111         222233  33343


Q ss_pred             HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                           .+...+.-.... ...||+..+|+.+-+.+|++
T Consensus       148 -----~~~~~~~i~~~~-~~~iGD~~nDi~~~~~aG~~  179 (207)
T 2go7_A          148 -----YLLDKYQLNSDN-TYYIGDRTLDVEFAQNSGIQ  179 (207)
T ss_dssp             -----HHHHHHTCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             -----HHHHHhCCCccc-EEEECCCHHHHHHHHHCCCe
Confidence                 222222211222 56899999999999999986

>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A

Probab=84.46  E-value=4.7  Score=35.01  Aligned_cols=65  Identities=17%  Similarity=0.289  Sum_probs=43.4

Q ss_pred             EEEecCC-ccccCCccccc-ccccCcCCcch-------hHHHHHHHHHH----CCceEEEEccCccc-chHHHHHHHHh
Q psy12533        361 VISDIDG-TITKSDVLGHV-LPIMGKDWAQN-------GVTRLFTKIKE----NGYKLLYLSARAIG-QSRVTREYLQS  425 (567)
Q Consensus       361 VIsDIDG-TiTkSD~~G~~-~~~~GkDw~h~-------Gva~l~~~i~~----nGY~iiYLSaRpi~-qa~~Tr~~L~~  425 (567)
                      -+-|.|| +++.++..|.. +-.....|.-+       ...+++.++.+    .+..|+.+|.-+.. ..+..++|++.
T Consensus         7 ~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~   85 (164)
T 2ggt_A            7 SLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKE   85 (164)
T ss_dssp             EEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHT
T ss_pred             EEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHH
Confidence            3567888 56777777764 22334456433       45577888887    48999999986532 35677888877

>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}

Probab=84.36  E-value=7.8  Score=34.62  Aligned_cols=76  Identities=17%  Similarity=0.354  Sum_probs=49.0

Q ss_pred             EEEec--CCc-cccCCccccc-ccccCcCCc------chhHHHHHHHHHHCCc------eEEEEccCcccchHHHHHHHH
Q psy12533        361 VISDI--DGT-ITKSDVLGHV-LPIMGKDWA------QNGVTRLFTKIKENGY------KLLYLSARAIGQSRVTREYLQ  424 (567)
Q Consensus       361 VIsDI--DGT-iTkSD~~G~~-~~~~GkDw~------h~Gva~l~~~i~~nGY------~iiYLSaRpi~qa~~Tr~~L~  424 (567)
                      -+-|+  ||. ++.++..|.. +-.....|.      .+-+.+++.++.++|.      .|+.++.... ..+..+.|++
T Consensus        41 ~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~-~~~~~~~~~~  119 (183)
T 3lwa_A           41 GGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY-SRDIAQDFVT  119 (183)
T ss_dssp             EEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC-CHHHHHHHHH
T ss_pred             eccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCC-CHHHHHHHHH
Confidence            44566  664 5566666653 323445664      3456678899999999      9999988652 4566788887


Q ss_pred             hcccCCccCCCCceecCCC
Q psy12533        425 SVKQEDLTLPEGPMLLNPT  443 (567)
Q Consensus       425 ~~~Q~~~~lP~GPvl~spd  443 (567)
                      .     ++++ .|++..++
T Consensus       120 ~-----~~~~-~~~~~d~~  132 (183)
T 3lwa_A          120 D-----NGLD-YPSIYDPP  132 (183)
T ss_dssp             H-----TTCC-SCEEECTT
T ss_pred             H-----cCCC-ccEEECCc
Confidence            7     6665 56665443

>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}

Probab=84.33  E-value=5.9  Score=34.68  Aligned_cols=66  Identities=14%  Similarity=0.264  Sum_probs=45.0

Q ss_pred             EEEEecCC-ccccCCccccc-cccccccccch-------hHHHHHHHHHH----CCceEEEEccCcc-cchHHHHHHHHh
Q psy12533         85 IVISDIDG-TITKSDVLGHV-LPIMGKDWAQN-------GVTRLFTKIKE----NGYKLLYLSARAI-GQSRVTREYLQS  150 (567)
Q Consensus        85 iVISDIDG-TITkSD~lG~i-l~~lGkDwth~-------GVa~Ly~~i~~----nGY~ilYLSaRpi-~~a~~Tr~~L~~  150 (567)
                      .-+-|.|| +++.++..|.. +-.+.-.|..+       ...+++.++.+    .+..|+.+|.-+. .-.+..+.|++.
T Consensus         9 f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~   88 (171)
T 2rli_A            9 FHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD   88 (171)
T ss_dssp             CEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHT
T ss_pred             eEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHH
Confidence            34568888 57888888875 32344455543       45577777876    4899999998653 235667888877

>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10

Probab=84.28  E-value=3.4  Score=37.09  Aligned_cols=75  Identities=16%  Similarity=0.278  Sum_probs=46.0

Q ss_pred             EEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533         87 ISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  158 (567)
Q Consensus        87 ISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L  158 (567)
                      +-|+|| +++.++..|.. +-.+...|..+      ...+++.++.+.|..|+.+|.-... .+..+.|++.     +++
T Consensus        45 l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~-~~~~~~~~~~-----~~~  118 (186)
T 1jfu_A           45 FEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRD-PEKPKTFLKE-----ANL  118 (186)
T ss_dssp             EECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSC-TTHHHHHHHH-----TTC
T ss_pred             eEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCC-HHHHHHHHHH-----cCC
Confidence            346666 46666666653 32334556543      4456677776678999999986432 2455778877     666


Q ss_pred             CCCceecCC
Q psy12533        159 PEGPMLLNP  167 (567)
Q Consensus       159 P~GPlllsp  167 (567)
                      +.-|++..+
T Consensus       119 ~~~~~~~d~  127 (186)
T 1jfu_A          119 TRLGYFNDQ  127 (186)
T ss_dssp             CTTCCEECT
T ss_pred             CCCceEECC
Confidence            655665444

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=84.23  E-value=1.4  Score=40.96  Aligned_cols=66  Identities=17%  Similarity=0.268  Sum_probs=47.0

Q ss_pred             CCcEEEEecCCccccCCcccc----c-cc--cccc-----cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533         82 NDKIVISDIDGTITKSDVLGH----V-LP--IMGK-----DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  148 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~----i-l~--~lGk-----Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L  148 (567)
                      ..+++|.|+|+|+..|...-.    + ++  .-|.     -..+||+.++...+++. |++.-.|+.+...++..-+.|
T Consensus        14 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~l   91 (181)
T 2ght_A           14 DKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL   91 (181)
T ss_dssp             TSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHH
Confidence            456899999999998753210    0 00  0111     13588999999999998 999999998877776655554

>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A

Probab=83.70  E-value=2.8  Score=37.84  Aligned_cols=77  Identities=5%  Similarity=0.066  Sum_probs=46.8

Q ss_pred             EEEecCC-ccccCCccccc-ccccCcCCc-------chhHHHHHHHHHH--CCceEEEEccCcccchHHHHHHHHhcccC
Q psy12533        361 VISDIDG-TITKSDVLGHV-LPIMGKDWA-------QNGVTRLFTKIKE--NGYKLLYLSARAIGQSRVTREYLQSVKQE  429 (567)
Q Consensus       361 VIsDIDG-TiTkSD~~G~~-~~~~GkDw~-------h~Gva~l~~~i~~--nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~  429 (567)
                      -+-|.|| +++.++..|.. +-....-|.       .+...+++.++.+  .+..++.+|.-|....+..++|++.   .
T Consensus        12 ~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~---~   88 (170)
T 3me7_A           12 TLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKE---Y   88 (170)
T ss_dssp             EEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHH---T
T ss_pred             EEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHH---c
Confidence            3568888 58888888864 222333442       2244456666765  4599999998664455667888776   2


Q ss_pred             CccCCCCceec
Q psy12533        430 DLTLPEGPMLL  440 (567)
Q Consensus       430 ~~~lP~GPvl~  440 (567)
                      +..+|.+++++
T Consensus        89 ~~~~~~w~~l~   99 (170)
T 3me7_A           89 GIDGKGWKVVK   99 (170)
T ss_dssp             TCCSSSEEEEE
T ss_pred             CCCCCCeEEEe
Confidence            33344444444

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=83.56  E-value=1.7  Score=40.63  Aligned_cols=93  Identities=12%  Similarity=0.102  Sum_probs=58.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC-CCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP-EGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  465 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP-~GPvl~spd~l~~al~rEvi~k~p~~fK~~~  465 (567)
                      ..+|+.++...++++||++..+|+.+.   ..++..|+.     .++. --.++.+.+ .      ..-.++|+.|+..+
T Consensus       111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~-----~~l~~f~~~~~~~~-~------~~~Kp~p~~~~~~~  175 (240)
T 2hi0_A          111 PFPGILDLMKNLRQKGVKLAVVSNKPN---EAVQVLVEE-----LFPGSFDFALGEKS-G------IRRKPAPDMTSECV  175 (240)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHH-----HSTTTCSEEEEECT-T------SCCTTSSHHHHHHH
T ss_pred             cCCCHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHH-----cCCcceeEEEecCC-C------CCCCCCHHHHHHHH
Confidence            457899999999999999999998654   334556655     2221 112222221 1      01234567776544


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                       +.+ .+   ...- ...+|++.+|+.+=+++|+.
T Consensus       176 -~~l-~~---~~~~-~~~vGDs~~Di~~a~~aG~~  204 (240)
T 2hi0_A          176 -KVL-GV---PRDK-CVYIGDSEIDIQTARNSEMD  204 (240)
T ss_dssp             -HHH-TC---CGGG-EEEEESSHHHHHHHHHTTCE
T ss_pred             -HHc-CC---CHHH-eEEEcCCHHHHHHHHHCCCe
Confidence             222 11   1122 45889999999999999995

>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0

Probab=83.42  E-value=4  Score=36.01  Aligned_cols=71  Identities=15%  Similarity=0.186  Sum_probs=47.9

Q ss_pred             EEecCCc-cccCCccccc--ccccC-cCCcc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533        362 ISDIDGT-ITKSDVLGHV--LPIMG-KDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  431 (567)
Q Consensus       362 IsDIDGT-iTkSD~~G~~--~~~~G-kDw~h------~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~  431 (567)
                      +-|+||. ++.++..|..  +-... ..|.-      +...+++.++.+.|..|+.+|.-   -.+..++|++.     +
T Consensus        13 l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d---~~~~~~~~~~~-----~   84 (161)
T 3drn_A           13 GIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD---DINSHKRFKEK-----Y   84 (161)
T ss_dssp             EEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC---CHHHHHHHHHH-----T
T ss_pred             eecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC---CHHHHHHHHHH-----h
Confidence            4477775 6667777763  32334 56643      35667888899999999999883   35677888877     6


Q ss_pred             cCCCCceecC
Q psy12533        432 TLPEGPMLLN  441 (567)
Q Consensus       432 ~lP~GPvl~s  441 (567)
                      +++ -|++..
T Consensus        85 ~~~-~~~~~d   93 (161)
T 3drn_A           85 KLP-FILVSD   93 (161)
T ss_dssp             TCC-SEEEEC
T ss_pred             CCC-ceEEEC
Confidence            665 555543

>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}

Probab=83.27  E-value=5.4  Score=33.79  Aligned_cols=75  Identities=7%  Similarity=-0.014  Sum_probs=48.2

Q ss_pred             EEEecCC-ccccCCccccc-cccccccccchhHH------H---HHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC
Q psy12533         86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQNGVT------R---LFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE  154 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i-l~~lGkDwth~GVa------~---Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~  154 (567)
                      -+-|.|| +++.++..|.. +-.+...|..+=..      +   ++.++++.|..|+.+|.-.  ..+..+.|++.    
T Consensus        11 ~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~--~~~~~~~~~~~----   84 (142)
T 3ewl_A           11 TYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDE--NREEWATKAVY----   84 (142)
T ss_dssp             EEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSS--CHHHHHHHHTT----
T ss_pred             EEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecC--CHHHHHHHHHH----
Confidence            4557888 67777877764 33455667765322      2   7888888999999998752  34455667665    


Q ss_pred             CccCCCCceecCCC
Q psy12533        155 DLTLPEGPMLLNPT  168 (567)
Q Consensus       155 ~~~LP~GPlllsp~  168 (567)
                       ++++ .|++..++
T Consensus        85 -~~~~-~~~~~d~~   96 (142)
T 3ewl_A           85 -MPQG-WIVGWNKA   96 (142)
T ss_dssp             -SCTT-CEEEECTT
T ss_pred             -cCCC-cceeeCCc
Confidence             5553 45554443

>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}

Probab=82.90  E-value=10  Score=32.26  Aligned_cols=63  Identities=10%  Similarity=0.004  Sum_probs=40.5

Q ss_pred             EEEecCC-ccccCCccccc-cccccccccch------hHHH---HHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTR---LFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~---Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -+-|.|| +++.++..|.. +-.+...|..+      ...+   ++.++++.|..|+.+|...  ..+..+.|++.
T Consensus        15 ~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~--~~~~~~~~~~~   88 (142)
T 3eur_A           15 TYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDE--ELDEWKKHRND   88 (142)
T ss_dssp             EEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSS--CHHHHHHHGGG
T ss_pred             EEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCC--CHHHHHHHHHh
Confidence            3456777 45667777764 33344567654      4556   8888888999999998743  23445556555

>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}

Probab=82.80  E-value=6.1  Score=34.53  Aligned_cols=33  Identities=9%  Similarity=0.188  Sum_probs=22.0

Q ss_pred             CCCCCCEEEEcCCCceeccccccccccHHhHHhhhhhc
Q psy12533        223 GIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQM  260 (567)
Q Consensus       223 GIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~  260 (567)
                      |+|  .+|+||++|+++.   .+...+...|.+.++.+
T Consensus       130 ~~P--~~~lid~~G~i~~---~g~~~~~~~l~~~l~~l  162 (165)
T 3ha9_A          130 SID--YIVIMDKSSNVLY---AGTTPSLGELESVIKSV  162 (165)
T ss_dssp             SSS--EEEEEETTCCEEE---EEESCCHHHHHHHHHHC
T ss_pred             Cce--EEEEEcCCCcEEE---eCCCCCHHHHHHHHHHH
Confidence            455  4799999999987   22222566777766654

>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A

Probab=82.56  E-value=6.4  Score=34.30  Aligned_cols=65  Identities=17%  Similarity=0.300  Sum_probs=43.9

Q ss_pred             EEEEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcc-----cchHHHHHHHH
Q psy12533         85 IVISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAI-----GQSRVTREYLQ  149 (567)
Q Consensus        85 iVISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi-----~~a~~Tr~~L~  149 (567)
                      .-+-|+|| +++.++..|.. +-.+...|..+      ...+++.++++.|..|+.+|..+.     .-.+..++|++
T Consensus        15 f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~   92 (170)
T 2p5q_A           15 FTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVC   92 (170)
T ss_dssp             CEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHH
T ss_pred             eEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHH
Confidence            34567888 57777777764 33344566543      455788888888999999997531     23456677877

>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}

Probab=82.24  E-value=4.7  Score=34.82  Aligned_cols=119  Identities=11%  Similarity=0.166  Sum_probs=69.4

Q ss_pred             cCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533         90 IDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  161 (567)
Q Consensus        90 IDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G  161 (567)
                      .|| +++.++..|.. +-.+...|..+      ...+++.++++.|..|+.++.-   ..+..+.|++.     ++++ .
T Consensus        12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d---~~~~~~~~~~~-----~~~~-~   82 (151)
T 3raz_A           12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD---TSDNIGNFLKQ-----TPVS-Y   82 (151)
T ss_dssp             TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS---CHHHHHHHHHH-----SCCS-S
T ss_pred             cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC---ChHHHHHHHHH-----cCCC-C
Confidence            577 46777777764 33455677654      3445555565668999999883   34667888877     5554 4


Q ss_pred             ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc
Q psy12533        162 PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE  241 (567)
Q Consensus       162 Plllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~  241 (567)
                      |++...+...                    ..+...|.           +.        --|+|  .+|+||++|+++..
T Consensus        83 ~~~~~~~~~~--------------------~~~~~~~~-----------~~--------v~~~P--~~~lid~~G~i~~~  121 (151)
T 3raz_A           83 PIWRYTGANS--------------------RNFMKTYG-----------NT--------VGVLP--FTVVEAPKCGYRQT  121 (151)
T ss_dssp             CEEEECCSCH--------------------HHHHHTTT-----------CC--------SCCSS--EEEEEETTTTEEEE
T ss_pred             ceEecCccch--------------------HHHHHHhC-----------Cc--------cCCCC--EEEEECCCCcEEEE
Confidence            5554332111                    11222221           10        11444  37999999999765


Q ss_pred             ccccccccHHhHHhhhhhc
Q psy12533        242 MTQTFQSTYSNMSYLVDQM  260 (567)
Q Consensus       242 ~~~~~~~sY~~l~~~vd~~  260 (567)
                      ....  .+...|.+.++.+
T Consensus       122 ~~g~--~~~~~l~~~l~~l  138 (151)
T 3raz_A          122 ITGE--VNEKSLTDAVKLA  138 (151)
T ss_dssp             CCSC--CCHHHHHHHHHHH
T ss_pred             ECCC--CCHHHHHHHHHHH
Confidence            4322  3566777766654

>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}

Probab=82.00  E-value=7.2  Score=35.12  Aligned_cols=75  Identities=17%  Similarity=0.264  Sum_probs=48.8

Q ss_pred             EEEEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCc-----ccchHHHHHHHHhc
Q psy12533         85 IVISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARA-----IGQSRVTREYLQSV  151 (567)
Q Consensus        85 iVISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRp-----i~~a~~Tr~~L~~~  151 (567)
                      .-+-|+|| +++.++..|.. +-.+...|.-+      ...+++.++.+.|..|+.+|...     ..-.+..++|++. 
T Consensus        30 f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~-  108 (183)
T 2obi_A           30 FSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAG-  108 (183)
T ss_dssp             CEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHT-
T ss_pred             eEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHH-
Confidence            34567888 67777777764 33344556543      45578888888899999998752     1234567888866 


Q ss_pred             ccCCccCCCCceec
Q psy12533        152 KQEDLTLPEGPMLL  165 (567)
Q Consensus       152 ~q~~~~LP~GPlll  165 (567)
                          ++++ -|++.
T Consensus       109 ----~~~~-~p~~~  117 (183)
T 2obi_A          109 ----YNVK-FDMFS  117 (183)
T ss_dssp             ----TTCC-SEEBC
T ss_pred             ----cCCC-ceEEe
Confidence                5554 45654

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=81.84  E-value=2.1  Score=48.36  Aligned_cols=103  Identities=18%  Similarity=0.231  Sum_probs=70.0

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      ..++.+.+||++.     |-+   .=.|..++++.+..+.++++|++++-+|+|+..-+.   ...+.     .++.  .
T Consensus       515 ~~~~~va~~~~~~-----G~i---~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~---~ia~~-----lgi~--~  576 (723)
T 3j09_A          515 KTAVIVARNGRVE-----GII---AVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAE---AISRE-----LNLD--L  576 (723)
T ss_dssp             CEEEEEEETTEEE-----EEE---EEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHH---HHHHH-----HTCS--E
T ss_pred             CeEEEEEECCEEE-----EEE---eecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHH---HHHHH-----cCCc--E
Confidence            3455556666543     222   126889999999999999999999999999876553   33333     3332  1


Q ss_pred             eecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        438 MLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       438 vl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                      ++.           ++   .| .-|.+.++.++.-      .-++.+|+-.||+.|-+++|+
T Consensus       577 ~~~-----------~~---~P-~~K~~~v~~l~~~------~~v~~vGDg~ND~~al~~A~v  617 (723)
T 3j09_A          577 VIA-----------EV---LP-HQKSEEVKKLQAK------EVVAFVGDGINDAPALAQADL  617 (723)
T ss_dssp             EEC-----------SC---CT-TCHHHHHHHHTTT------CCEEEEECSSTTHHHHHHSSE
T ss_pred             EEc-----------cC---CH-HHHHHHHHHHhcC------CeEEEEECChhhHHHHhhCCE
Confidence            110           11   12 2388888888772      237899999999999999764

>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}

Probab=81.82  E-value=3.6  Score=39.87  Aligned_cols=59  Identities=8%  Similarity=0.110  Sum_probs=43.5

Q ss_pred             ccccCCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC
Q psy12533         93 TITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE  154 (567)
Q Consensus        93 TITkSD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~  154 (567)
                      +++-+|..|..  +-+...+|+-+      ...+++.++++.|..|+-+|.-+   .+..+.|++...+.
T Consensus        69 ~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~---~~~~~~~~~~~~~~  135 (240)
T 3qpm_A           69 ELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDS---QFTHLAWIITPRKQ  135 (240)
T ss_dssp             EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSC---HHHHHHHHHSCGGG
T ss_pred             EEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCC---HHHHHHHHHHHHhh
Confidence            78888888874  33333477653      67788999999999999999754   56678899876443

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=81.80  E-value=0.43  Score=43.43  Aligned_cols=52  Identities=12%  Similarity=0.222  Sum_probs=32.8

Q ss_pred             EEecCCCcccHHhHHHcCCCCCCEEEEcCCCc--------ccccccccccccHhhHHhhhhhc
Q psy12533        481 YAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE--------VKHEMTQTFQSTYSNMSYLVDQM  535 (567)
Q Consensus       481 ~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~--------~~~~~~~~~~~sY~~l~~~vd~~  535 (567)
                      ...||+..+|+.+-+++|+.   ...++....        ++.........+...|.+++..+
T Consensus       163 ~i~iGD~~~Di~~a~~aG~~---~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~  222 (229)
T 2fdr_A          163 VVVVEDSVHGIHGARAAGMR---VIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAM  222 (229)
T ss_dssp             EEEEESSHHHHHHHHHTTCE---EEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHH
T ss_pred             eEEEcCCHHHHHHHHHCCCE---EEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHHHHh
Confidence            45899999999999999985   345555432        22111223446666666666543

>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}

Probab=81.75  E-value=6.2  Score=33.80  Aligned_cols=73  Identities=19%  Similarity=0.395  Sum_probs=41.9

Q ss_pred             EEecCCc-cccCCccccc-ccccCcCCc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533        362 ISDIDGT-ITKSDVLGHV-LPIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  433 (567)
Q Consensus       362 IsDIDGT-iTkSD~~G~~-~~~~GkDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l  433 (567)
                      +-|.||. ++.++..|.. +-.....|.      .+-+.+++.++.+.|..|+.++.-+. .....++|+..     +++
T Consensus        13 l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~-----~~~   86 (154)
T 3kcm_A           13 LNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEG-GKVAVEEFFRK-----TGF   86 (154)
T ss_dssp             EECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTT-HHHHHHHHHHH-----HCC
T ss_pred             EEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCc-chHHHHHHHHH-----cCC
Confidence            3455553 4445545532 222334553      23455667777777899999988654 24556777766     555


Q ss_pred             CCCceecC
Q psy12533        434 PEGPMLLN  441 (567)
Q Consensus       434 P~GPvl~s  441 (567)
                      + .|++..
T Consensus        87 ~-~~~~~d   93 (154)
T 3kcm_A           87 T-LPVLLD   93 (154)
T ss_dssp             C-CCEEEC
T ss_pred             C-eeEEec
Confidence            4 455543

>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A

Probab=81.64  E-value=10  Score=32.97  Aligned_cols=64  Identities=17%  Similarity=0.309  Sum_probs=40.6

Q ss_pred             EEEecCC-ccccCCccccc-ccccCcCCcc------hhHHHHHHHHHHCCceEEEEccCcc-----cchHHHHHHHH
Q psy12533        361 VISDIDG-TITKSDVLGHV-LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAI-----GQSRVTREYLQ  424 (567)
Q Consensus       361 VIsDIDG-TiTkSD~~G~~-~~~~GkDw~h------~Gva~l~~~i~~nGY~iiYLSaRpi-----~qa~~Tr~~L~  424 (567)
                      -+-|+|| +++.++..|.. +-.....|.-      +...+++.++.+.|..|+.+|..+.     .-....++|++
T Consensus        16 ~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~   92 (170)
T 2p5q_A           16 TVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVC   92 (170)
T ss_dssp             EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHH
T ss_pred             EEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHH
Confidence            3456676 45666666653 2233446643      3455788888888999999997531     23455677777

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=81.61  E-value=0.43  Score=43.45  Aligned_cols=16  Identities=31%  Similarity=0.547  Sum_probs=14.1

Q ss_pred             CcEEEEecCCccccCC
Q psy12533         83 DKIVISDIDGTITKSD   98 (567)
Q Consensus        83 ~kiVISDIDGTITkSD   98 (567)
                      -|+|+||+||||+.++
T Consensus         4 ik~i~fDlDGTL~d~~   19 (229)
T 2fdr_A            4 FDLIIFDCDGVLVDSE   19 (229)
T ss_dssp             CSEEEECSBTTTBCCH
T ss_pred             ccEEEEcCCCCcCccH
Confidence            3789999999999875

>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A

Probab=81.59  E-value=3  Score=38.29  Aligned_cols=62  Identities=15%  Similarity=0.242  Sum_probs=43.1

Q ss_pred             EEEec-CC---ccccCCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         86 VISDI-DG---TITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        86 VISDI-DG---TITkSD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -.-|. ||   +++-++..|..  +-+....|+.+      ...+++.++++.|..|+-+|.-+   .+..+.|++.
T Consensus        11 ~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~---~~~~~~~~~~   84 (186)
T 1n8j_A           11 KNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDT---HFTHKAWHSS   84 (186)
T ss_dssp             EEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSC---HHHHHHHHHH
T ss_pred             EeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCC---HHHHHHHHHH
Confidence            34566 47   78888888864  22222456543      55678888999999999999753   4556888877

>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A

Probab=81.42  E-value=6.5  Score=34.05  Aligned_cols=123  Identities=11%  Similarity=0.107  Sum_probs=70.9

Q ss_pred             EEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCc---ccchHHHHHHHHhcccCC
Q psy12533         87 ISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARA---IGQSRVTREYLQSVKQED  155 (567)
Q Consensus        87 ISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRp---i~~a~~Tr~~L~~~~q~~  155 (567)
                      +-|+|| +++.++..|.. +-.+...|..+      .+.+++.+++..|..|+.+|.-.   ..-....++|+..     
T Consensus        23 l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~-----   97 (164)
T 2h30_A           23 MKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAG-----   97 (164)
T ss_dssp             CEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTT-----
T ss_pred             cCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHh-----
Confidence            568888 47777777754 44455677654      34455666667799999998631   1122334555544     


Q ss_pred             ccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCC
Q psy12533        156 LTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  235 (567)
Q Consensus       156 ~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  235 (567)
                      ++++.-|+....+.                       .+...|.                     -.|+|  .+|+||++
T Consensus        98 ~~~~~~~~~~d~~~-----------------------~~~~~~~---------------------v~~~P--~~~lid~~  131 (164)
T 2h30_A           98 LNYPKLPVVTDNGG-----------------------TIAQNLN---------------------ISVYP--SWALIGKD  131 (164)
T ss_dssp             SCCTTSCEEECTTC-----------------------HHHHHTT---------------------CCSSS--EEEEECTT
T ss_pred             CCCCcceEEEcCch-----------------------HHHHHcC---------------------CCccc--eEEEECCC
Confidence            45554444433221                       0111221                     11344  46899999


Q ss_pred             CceeccccccccccHHhHHhhhhhcCC
Q psy12533        236 GEVKHEMTQTFQSTYSNMSYLVDQMFP  262 (567)
Q Consensus       236 g~~~~~~~~~~~~sY~~l~~~vd~~fP  262 (567)
                      |+++.....  ..+...|.+.++.+.-
T Consensus       132 G~i~~~~~g--~~~~~~l~~~i~~~~~  156 (164)
T 2h30_A          132 GDVQRIVKG--SINEAQALALIRNPNA  156 (164)
T ss_dssp             SCEEEEEES--CCCHHHHHHHHHCTTC
T ss_pred             CcEEEEEcC--CCCHHHHHHHHHHHHH
Confidence            999765322  2357778887776644

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=81.35  E-value=2  Score=40.17  Aligned_cols=91  Identities=13%  Similarity=0.141  Sum_probs=55.4

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC-CCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP-EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP-~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      +|+.++...++++||++..+|+.+.   ..++..|+.     .++. --.++.+.+ .      .....+|+.|+..+ +
T Consensus       113 ~g~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~-----~~l~~f~~~~~~~~-~------~~~Kp~p~~~~~~~-~  176 (240)
T 2hi0_A          113 PGILDLMKNLRQKGVKLAVVSNKPN---EAVQVLVEE-----LFPGSFDFALGEKS-G------IRRKPAPDMTSECV-K  176 (240)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHH-----HSTTTCSEEEEECT-T------SCCTTSSHHHHHHH-H
T ss_pred             CCHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHH-----cCCcceeEEEecCC-C------CCCCCCHHHHHHHH-H
Confidence            5888999999999999999998654   344556665     2221 112222221 0      11234555565444 2


Q ss_pred             HHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .+ .+ ++  .- ...+|+..+|+.+=+++|+.
T Consensus       177 ~l-~~-~~--~~-~~~vGDs~~Di~~a~~aG~~  204 (240)
T 2hi0_A          177 VL-GV-PR--DK-CVYIGDSEIDIQTARNSEMD  204 (240)
T ss_dssp             HH-TC-CG--GG-EEEEESSHHHHHHHHHTTCE
T ss_pred             Hc-CC-CH--HH-eEEEcCCHHHHHHHHHCCCe
Confidence            22 11 11  12 56788999999999999985

>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}

Probab=81.34  E-value=15  Score=31.44  Aligned_cols=73  Identities=16%  Similarity=0.223  Sum_probs=45.3

Q ss_pred             EEecCC-ccccC--Cccccc-cccccccccch--------hHHHHHHHH-HHCCceEEEEccCcccchHHHHHHHHhccc
Q psy12533         87 ISDIDG-TITKS--DVLGHV-LPIMGKDWAQN--------GVTRLFTKI-KENGYKLLYLSARAIGQSRVTREYLQSVKQ  153 (567)
Q Consensus        87 ISDIDG-TITkS--D~lG~i-l~~lGkDwth~--------GVa~Ly~~i-~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q  153 (567)
                      +-|+|| +++.+  +..|.. +-.+...|..+        ...+++.++ ++.|..|+.+|.-.  ..+..+.|++.   
T Consensus        16 l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~--~~~~~~~~~~~---   90 (150)
T 3fw2_A           16 LPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV--DKQQWKDAIKR---   90 (150)
T ss_dssp             EEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS--CHHHHHHHHHH---
T ss_pred             eECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC--CHHHHHHHHHH---
Confidence            446666 46666  666753 22233455433        445677777 77789999998764  24667778776   


Q ss_pred             CCccCCCCceecCC
Q psy12533        154 EDLTLPEGPMLLNP  167 (567)
Q Consensus       154 ~~~~LP~GPlllsp  167 (567)
                        ++++ .|++..+
T Consensus        91 --~~~~-~~~~~d~  101 (150)
T 3fw2_A           91 --DTLD-WEQVCDF  101 (150)
T ss_dssp             --TTCC-SEEECCS
T ss_pred             --hCCC-ceEEEcC
Confidence              6663 5665443

>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}

Probab=81.21  E-value=6.2  Score=35.71  Aligned_cols=64  Identities=16%  Similarity=0.268  Sum_probs=40.3

Q ss_pred             EEecCC-ccccCCccccc-ccccC----cCCc---chhHHHHHHHHHHCC--ceEEEEccCcc-cchHHHHHHHHh
Q psy12533        362 ISDIDG-TITKSDVLGHV-LPIMG----KDWA---QNGVTRLFTKIKENG--YKLLYLSARAI-GQSRVTREYLQS  425 (567)
Q Consensus       362 IsDIDG-TiTkSD~~G~~-~~~~G----kDw~---h~Gva~l~~~i~~nG--Y~iiYLSaRpi-~qa~~Tr~~L~~  425 (567)
                      .-|.|| +++.||..|.+ +--.+    .+|.   -+...+++..+.+.|  .++|.+|--|. --.+..++|++.
T Consensus        17 L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~   92 (170)
T 4hde_A           17 FTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQK   92 (170)
T ss_dssp             EECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTT
T ss_pred             EECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHH
Confidence            457787 57888888875 22233    2442   346667888888877  56677775443 123456788776

>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10

Probab=80.99  E-value=1.8  Score=38.48  Aligned_cols=70  Identities=13%  Similarity=0.098  Sum_probs=42.1

Q ss_pred             EEecCC-ccccCCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         87 ISDIDG-TITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        87 ISDIDG-TITkSD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      .-|.|| +++-++..|..  +.+....|+.+      ...+++.++  .|..|+-+|.-+   .+..+.|++.     ++
T Consensus        27 l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~---~~~~~~~~~~-----~~   96 (163)
T 1psq_A           27 LTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDL---PFAQKRWCGA-----EG   96 (163)
T ss_dssp             EECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSC---HHHHHHHHHH-----HT
T ss_pred             EEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCC---HHHHHHHHHh-----cC
Confidence            447788 67888888864  22222456543      233444444  689999998643   4556778877     55


Q ss_pred             CCCCceecC
Q psy12533        158 LPEGPMLLN  166 (567)
Q Consensus       158 LP~GPllls  166 (567)
                      ++.-|++..
T Consensus        97 ~~~~~~l~D  105 (163)
T 1psq_A           97 LDNAIMLSD  105 (163)
T ss_dssp             CTTSEEEEC
T ss_pred             CCCcEEecC
Confidence            523355543

>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A

Probab=80.99  E-value=3.4  Score=36.06  Aligned_cols=62  Identities=11%  Similarity=0.152  Sum_probs=39.9

Q ss_pred             EEEecCC-ccccCCcccc--c-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         86 VISDIDG-TITKSDVLGH--V-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~--i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      .+-|.|| +++.++..|.  + +-+.+..|..+      ...+++.++++.|..|+.+|.-.   .+..++|++.
T Consensus        19 ~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~---~~~~~~~~~~   90 (160)
T 1xvw_A           19 TLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGP---PPTHKIWATQ   90 (160)
T ss_dssp             EEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCC---HHHHHHHHHH
T ss_pred             EeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCC---HHHHHHHHHh
Confidence            3457777 5777888776  3 33334667654      33345555555689999998742   4566778876

>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}

Probab=80.93  E-value=6.4  Score=34.42  Aligned_cols=61  Identities=18%  Similarity=0.250  Sum_probs=40.9

Q ss_pred             EEEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533         86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  148 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L  148 (567)
                      -+-|+|| +++.++..|.. +-.+...|..+      ...+++.++.+.|..|+.+|.-+.  .+..+.|+
T Consensus        19 ~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~--~~~~~~~~   87 (152)
T 2lrt_A           19 QLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGD--EHFWKTSA   87 (152)
T ss_dssp             CEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCC--HHHHHHHH
T ss_pred             EEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCC--HHHHHHHH
Confidence            4568888 67778877764 32334467554      556788888888999999988654  23345554

>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}

Probab=80.90  E-value=6.4  Score=35.59  Aligned_cols=64  Identities=16%  Similarity=0.267  Sum_probs=42.0

Q ss_pred             EEecCC-ccccCCccccc-ccccc----ccccc---hhHHHHHHHHHHCC--ceEEEEccCcc-cchHHHHHHHHh
Q psy12533         87 ISDIDG-TITKSDVLGHV-LPIMG----KDWAQ---NGVTRLFTKIKENG--YKLLYLSARAI-GQSRVTREYLQS  150 (567)
Q Consensus        87 ISDIDG-TITkSD~lG~i-l~~lG----kDwth---~GVa~Ly~~i~~nG--Y~ilYLSaRpi-~~a~~Tr~~L~~  150 (567)
                      .-|.|| +++.+|..|.+ +-.++    .+|..   +..++++..+.+.|  ..++.+|--|. --.+..++|++.
T Consensus        17 L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~   92 (170)
T 4hde_A           17 FTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQK   92 (170)
T ss_dssp             EECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTT
T ss_pred             EECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHH
Confidence            458888 68889999975 22233    34432   36667888888777  66777775443 224566888876

>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A

Probab=80.76  E-value=11  Score=32.30  Aligned_cols=124  Identities=19%  Similarity=0.342  Sum_probs=72.4

Q ss_pred             EEEecCC-ccccCCccccc-ccccCcCCcc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533        361 VISDIDG-TITKSDVLGHV-LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  432 (567)
Q Consensus       361 VIsDIDG-TiTkSD~~G~~-~~~~GkDw~h------~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~  432 (567)
                      -+-|.|| +++.++..|.. +-.....|..      +.+.+++.++.+.|..|+.++....  ....+.|++.     ++
T Consensus        10 ~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~--~~~~~~~~~~-----~~   82 (151)
T 2f9s_A           10 VLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGES--KIAVHNFMKS-----YG   82 (151)
T ss_dssp             EEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCC--HHHHHHHHHH-----HT
T ss_pred             eeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC--HHHHHHHHHH-----cC
Confidence            4556777 35666666653 3334466742      2445677777778999999987543  3566777776     55


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCc
Q psy12533        433 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE  512 (567)
Q Consensus       433 lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~  512 (567)
                      ++ .|++..++.                       .+...|           |-          -|+|  .+|+||++|+
T Consensus        83 ~~-~~~~~d~~~-----------------------~~~~~~-----------~v----------~~~P--~~~lid~~G~  115 (151)
T 2f9s_A           83 VN-FPVVLDTDR-----------------------QVLDAY-----------DV----------SPLP--TTFLINPEGK  115 (151)
T ss_dssp             CC-SCEEEETTS-----------------------HHHHHT-----------TC----------CSSC--EEEEECTTSE
T ss_pred             CC-ceEEECCch-----------------------HHHHhc-----------CC----------CCCC--eEEEECCCCc
Confidence            54 344432211                       111111           11          1444  4799999999


Q ss_pred             ccccccccccccHhhHHhhhhhcCCCCC
Q psy12533        513 VKHEMTQTFQSTYSNMSYLVDQMFPSSL  540 (567)
Q Consensus       513 ~~~~~~~~~~~sY~~l~~~vd~~FP~~~  540 (567)
                      +..... + ..+...|.+.++.+.+.-.
T Consensus       116 i~~~~~-G-~~~~~~l~~~l~~ll~~~~  141 (151)
T 2f9s_A          116 VVKVVT-G-TMTESMIHDYMNLIKPGET  141 (151)
T ss_dssp             EEEEEE-S-CCCHHHHHHHHHHHSCC--
T ss_pred             EEEEEe-C-CCCHHHHHHHHHHHHhhhh
Confidence            976432 2 2367788888888765443

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=80.37  E-value=3.4  Score=48.55  Aligned_cols=112  Identities=19%  Similarity=0.279  Sum_probs=66.0

Q ss_pred             ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC---------ccCC--------------CCcee-
Q psy12533        109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED---------LTLP--------------EGPML-  164 (567)
Q Consensus       109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~---------~~LP--------------~GPll-  164 (567)
                      .|-.++++.+..++++++|.+++.+|+|+..-+.....-+.-..+++         .+++              .|.-+ 
T Consensus       602 ~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~  681 (1034)
T 3ixz_A          602 IDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK  681 (1034)
T ss_pred             cCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence            68899999999999999999999999998766543322221111000         0000              00000 


Q ss_pred             -cCCCchhhhhhh---hhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        165 -LNPTSLLNAFHT---EVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       165 -lsp~~l~~al~R---Evi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                       ++...+...+.+   .+..+-....|...++.++..     .-.++++|+..||+.|-+++||-
T Consensus       682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-----g~~V~a~GDG~ND~~mLk~A~vG  741 (1034)
T 3ixz_A          682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-----GAIVAVTGDGVNDSPALKKADIG  741 (1034)
T ss_pred             hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-----CCEEEEECCcHHhHHHHHHCCee
Confidence             000001000000   022222234688888888774     34699999999999999987654

>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10

Probab=80.29  E-value=9  Score=34.23  Aligned_cols=73  Identities=16%  Similarity=0.280  Sum_probs=42.4

Q ss_pred             ecCCc-cccCCccccc-ccccCcCCcc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533        364 DIDGT-ITKSDVLGHV-LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  435 (567)
Q Consensus       364 DIDGT-iTkSD~~G~~-~~~~GkDw~h------~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~  435 (567)
                      |+||. ++.++..|.. +-.....|..      +...+++.++.+.|..|+.++.-... .+..++|++.     ++++.
T Consensus        47 ~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~-~~~~~~~~~~-----~~~~~  120 (186)
T 1jfu_A           47 DADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRD-PEKPKTFLKE-----ANLTR  120 (186)
T ss_dssp             CTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSC-TTHHHHHHHH-----TTCCT
T ss_pred             cCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCC-HHHHHHHHHH-----cCCCC
Confidence            44442 4445555542 2223345642      34456677777779999999986432 2456788877     66665


Q ss_pred             CceecCC
Q psy12533        436 GPMLLNP  442 (567)
Q Consensus       436 GPvl~sp  442 (567)
                      -|++..+
T Consensus       121 ~~~~~d~  127 (186)
T 1jfu_A          121 LGYFNDQ  127 (186)
T ss_dssp             TCCEECT
T ss_pred             CceEECC
Confidence            5666543

>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0

Probab=80.15  E-value=10  Score=32.72  Aligned_cols=74  Identities=11%  Similarity=0.302  Sum_probs=46.6

Q ss_pred             EEEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      -+-|+|| +++.++..|.. +-.+...|..+      -+.+++.++.+.|..|+.++...  ..+..+.|++.     ++
T Consensus        18 ~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~--~~~~~~~~~~~-----~~   90 (165)
T 3or5_A           18 SGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE--QLPNVKNYMKT-----QG   90 (165)
T ss_dssp             EEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC--CHHHHHHHHHH-----HT
T ss_pred             eeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC--CHHHHHHHHHH-----cC
Confidence            4556777 45556666643 33344566544      55577778888889999998753  35566788877     55


Q ss_pred             CCCCceecCC
Q psy12533        158 LPEGPMLLNP  167 (567)
Q Consensus       158 LP~GPlllsp  167 (567)
                      ++ .|++..+
T Consensus        91 ~~-~~~~~~~   99 (165)
T 3or5_A           91 II-YPVMMAT   99 (165)
T ss_dssp             CC-SCEEECC
T ss_pred             CC-CceEecC
Confidence            54 4555543

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=80.13  E-value=2.3  Score=38.91  Aligned_cols=92  Identities=10%  Similarity=0.147  Sum_probs=55.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..||+.++++.+++ ||++.-+|+.+...   ++..|+.     .+|..    . .+..+.+-  ....++|+.|+..+ 
T Consensus        85 ~~~g~~~~l~~L~~-~~~l~i~T~~~~~~---~~~~l~~-----~gl~~----~-f~~i~~~~--~~~Kp~p~~~~~~~-  147 (210)
T 2ah5_A           85 LFPQIIDLLEELSS-SYPLYITTTKDTST---AQDMAKN-----LEIHH----F-FDGIYGSS--PEAPHKADVIHQAL-  147 (210)
T ss_dssp             ECTTHHHHHHHHHT-TSCEEEEEEEEHHH---HHHHHHH-----TTCGG----G-CSEEEEEC--SSCCSHHHHHHHHH-
T ss_pred             CCCCHHHHHHHHHc-CCeEEEEeCCCHHH---HHHHHHh-----cCchh----h-eeeeecCC--CCCCCChHHHHHHH-
Confidence            35799999999999 99998888865433   3555655     33321    0 11222111  11234456665443 


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                          ..++-.... ...+|++.+|+.+=+++|+.
T Consensus       148 ----~~lg~~p~~-~~~vgDs~~Di~~a~~aG~~  176 (210)
T 2ah5_A          148 ----QTHQLAPEQ-AIIIGDTKFDMLGARETGIQ  176 (210)
T ss_dssp             ----HHTTCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             ----HHcCCCccc-EEEECCCHHHHHHHHHCCCc
Confidence                222211122 45789999999999999995

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	567
d1ltqa1	149	c.108.1.9 (A:153-301) Polynucleotide kinase, phosp	7e-16
d1ltqa1	149	c.108.1.9 (A:153-301) Polynucleotide kinase, phosp	7e-16

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} Length = 149

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

 Score = 72.9 bits (178), Expect = 7e-16
 Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 11/143 (7%)

Query: 84  KIVISDIDGTITKSDVLGHVLPI-MGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR 142
           K VI D+DGT+ K +  G         D     V  L       GY+++ +S R  G   
Sbjct: 8   KAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKE 67

Query: 143 VTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNT 202
              +Y +  ++    +   P+++           + + K+                 P+ 
Sbjct: 68  DPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEI---------FWKHIAPHF 118

Query: 203 QPFYAGYGNKVNDVWSYQAVGIP 225
               A   ++   V  ++ +G+ 
Sbjct: 119 DVKLA-IDDRTQVVEMWRRIGVE 140

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} Length = 149

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

 Score = 72.9 bits (178), Expect = 7e-16
 Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 11/143 (7%)

Query: 359 KIVISDIDGTITKSDVLGHVLPI-MGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR 417
           K VI D+DGT+ K +  G         D     V  L       GY+++ +S R  G   
Sbjct: 8   KAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKE 67

Query: 418 VTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNT 477
              +Y +  ++    +   P+++           + + K+                 P+ 
Sbjct: 68  DPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEI---------FWKHIAPHF 118

Query: 478 QPFYAGYGNKVNDVWSYQAVGIP 500
               A   ++   V  ++ +G+ 
Sbjct: 119 DVKLA-IDDRTQVVEMWRRIGVE 140

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	567
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.74
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.7
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	98.57
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	98.49
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	98.45
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	98.4
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.18
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.16
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	97.94
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	97.9
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	97.84
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	97.81
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	97.81
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	97.77
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	97.73
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	97.71
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.65
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.63
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.62
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.61
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	97.6
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	97.58
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	97.55
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.52
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	97.5
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.48
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	97.46
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	97.45
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	97.44
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	97.41
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.37
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.37
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	97.34
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	97.31
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.28
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	97.28
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.28
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	97.27
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	97.23
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	97.21
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.13
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.13
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.08
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	96.99
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	96.97
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	96.97
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	96.96
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	96.94
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	96.93
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	96.8
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	96.79
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	96.79
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	96.71
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	96.64
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	96.6
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	96.59
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	96.58
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	96.55
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	96.54
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	96.46
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	96.41
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	96.37
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	96.3
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	96.09
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	96.08
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	96.06
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	96.02
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	95.99
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	95.98
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	95.96
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	95.94
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	95.94
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	95.92
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	95.82
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	95.82
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	95.81
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	95.79
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	95.78
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	95.76
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	95.75
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	95.75
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	95.74
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	95.65
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	95.47
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	95.45
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	95.38
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	95.33
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	95.18
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	94.93
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	94.87
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	94.87
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	94.64
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	94.47
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	93.74
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	93.5
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	93.17
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	91.44
d1st9a_	137	Thiol-disulfide oxidoreductase ResA {Bacillus subt	90.64
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	90.51
d1st9a_	137	Thiol-disulfide oxidoreductase ResA {Bacillus subt	90.12
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	86.37
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	85.06
d1lu4a_	134	Soluble secreted antigen MPT53 {Mycobacterium tube	84.67
d1jfua_	176	Membrane-anchored thioredoxin-like protein TlpA, s	84.01
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	82.79
d1xvwa1	153	Putative peroxiredoxin Rv2238c/MT2298 {Mycobacteri	80.9
d1jfua_	176	Membrane-anchored thioredoxin-like protein TlpA, s	80.31
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	80.06

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.74  E-value=6.6e-19  Score=156.09  Aligned_cols=134  Identities=19%  Similarity=0.171  Sum_probs=104.7

Q ss_pred             eCCCeEEEEecCCccccCCccccc-ccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc--
Q psy12533        355 RWNDKIVISDIDGTITKSDVLGHV-LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL--  431 (567)
Q Consensus       355 ~~~~kiVIsDIDGTiTkSD~~G~~-~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~--  431 (567)
                      |...|+|||||||||+.+..+.++ +..+..+...|||.++++.++++||+|+|+|+|+..+...|.+||....+...  
T Consensus         4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~   83 (149)
T d1ltqa1           4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDI   83 (149)
T ss_dssp             TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHT
T ss_pred             CCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhc
Confidence            456799999999999999988887 45577888999999999999999999999999999999999999987544322  


Q ss_pred             -cCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        432 -TLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       432 -~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                       +.|.-.+...+++-         .+.+...|...|..+..    ...-+.+.||+|.+|+.||+++||++
T Consensus        84 ~~~~~~~~~~~~~~~---------~~~d~~~k~~~l~~~~~----~~~~i~~~igD~~~dv~a~~~~Gi~~  141 (149)
T d1ltqa1          84 AGVPLVMQCQREQGD---------TRKDDVVKEEIFWKHIA----PHFDVKLAIDDRTQVVEMWRRIGVEC  141 (149)
T ss_dssp             TCCCCSEEEECCTTC---------CSCHHHHHHHHHHHHTT----TTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred             CCCcEEEeecccccc---------cCCchHHHHHHHHHhcc----CCCceEEEEcCCHHHHHHHHHCCCcE
Confidence             23333333333221         23447889998887755    23344678999999999999999995

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.70  E-value=3.4e-18  Score=151.42  Aligned_cols=133  Identities=18%  Similarity=0.168  Sum_probs=102.9

Q ss_pred             cCCCcEEEEecCCccccCCccccc-cccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc-
Q psy12533         80 RWNDKIVISDIDGTITKSDVLGHV-LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT-  157 (567)
Q Consensus        80 ~~~~kiVISDIDGTITkSD~lG~i-l~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~-  157 (567)
                      |...|+|||||||||+.+..+.++ +..+..+...+||.++++.++++||+|+|+|+|+..+.+.|.+||....+.... 
T Consensus         4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~   83 (149)
T d1ltqa1           4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDI   83 (149)
T ss_dssp             TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHT
T ss_pred             CCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhc
Confidence            456789999999999999888887 455778899999999999999999999999999999999999999875443322 


Q ss_pred             --CCCCceecCCCchhhhhhhhhhccC-hhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        158 --LPEGPMLLNPTSLLNAFHTEVIEKK-PQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       158 --LP~GPlllsp~~l~~al~REvi~k~-p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                        .|.-.+...+.          -..+ +...|...|..+..-    ..-+++.||+|.+|++||+++||++
T Consensus        84 ~~~~~~~~~~~~~----------~~~~~d~~~k~~~l~~~~~~----~~~i~~~igD~~~dv~a~~~~Gi~~  141 (149)
T d1ltqa1          84 AGVPLVMQCQREQ----------GDTRKDDVVKEEIFWKHIAP----HFDVKLAIDDRTQVVEMWRRIGVEC  141 (149)
T ss_dssp             TCCCCSEEEECCT----------TCCSCHHHHHHHHHHHHTTT----TCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred             CCCcEEEeecccc----------cccCCchHHHHHHHHHhccC----CCceEEEEcCCHHHHHHHHHCCCcE
Confidence              33222332332          2233 445888888776543    2334678999999999999999996

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.57  E-value=3.5e-08  Score=86.72  Aligned_cols=64  Identities=19%  Similarity=0.226  Sum_probs=54.5

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  435 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~  435 (567)
                      .+++||||||+..+     .+..|+  +.+++.++.+++++.||+|+++|||+......|.+||..     +++|-
T Consensus         2 ti~vDiDGTl~~~~-----~~~~~k--Pi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~-----~~i~y   65 (122)
T d2obba1           2 TIAVDFDGTIVEHR-----YPRIGE--EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-----RGLEF   65 (122)
T ss_dssp             EEEECCBTTTBCSC-----TTSCCC--BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-----TTCCC
T ss_pred             EEEEEcCCCcCCCC-----CCcccc--ccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHH-----cCCCc
Confidence            47999999998654     223343  578999999999999999999999999999999999998     88883

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.49  E-value=8.2e-08  Score=84.31  Aligned_cols=64  Identities=19%  Similarity=0.221  Sum_probs=54.6

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE  160 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~  160 (567)
                      .|++||||||+..+.     +..|+  +.+++.++.+++++.|++|+++|||+......|.+||+.     +++|-
T Consensus         2 ti~vDiDGTl~~~~~-----~~~~k--Pi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~-----~~i~y   65 (122)
T d2obba1           2 TIAVDFDGTIVEHRY-----PRIGE--EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-----RGLEF   65 (122)
T ss_dssp             EEEECCBTTTBCSCT-----TSCCC--BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-----TTCCC
T ss_pred             EEEEEcCCCcCCCCC-----Ccccc--ccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHH-----cCCCc
Confidence            489999999986542     23344  577999999999999999999999999999999999998     88883

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=98.45  E-value=1.3e-07  Score=83.40  Aligned_cols=72  Identities=22%  Similarity=0.392  Sum_probs=55.4

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCc------------ccchHHHHHHHHhc
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARA------------IGQSRVTREYLQSV  426 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRp------------i~qa~~Tr~~L~~~  426 (567)
                      |.++|||||||+...- +.+-    ..-+.++++++.+.+++.|++|+++|||.            ......|.+||+. 
T Consensus         2 K~i~~DiDGTI~~~~~-~~y~----~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~-   75 (124)
T d1xpja_           2 KKLIVDLDGTLTQANT-SDYR----NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDK-   75 (124)
T ss_dssp             CEEEECSTTTTBCCCC-SCGG----GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHH-
T ss_pred             CEEEEeCCCCeECCCC-CCcC----ccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHH-
Confidence            5689999999987532 2221    11256799999999999999999999994            4567889999999 


Q ss_pred             ccCCccCCCCceec
Q psy12533        427 KQEDLTLPEGPMLL  440 (567)
Q Consensus       427 ~Q~~~~lP~GPvl~  440 (567)
                          +++|-=-|++
T Consensus        76 ----~gI~Yd~Li~   85 (124)
T d1xpja_          76 ----HQVPYDEILV   85 (124)
T ss_dssp             ----TTCCCSEEEE
T ss_pred             ----cCCCceEEEE
Confidence                8888544443

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=98.40  E-value=2e-07  Score=82.13  Aligned_cols=71  Identities=23%  Similarity=0.395  Sum_probs=55.4

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCc------------ccchHHHHHHHHhc
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARA------------IGQSRVTREYLQSV  151 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRp------------i~~a~~Tr~~L~~~  151 (567)
                      |.+++||||||+...- +.+    ...-+.+++.++.+.+++.|++|++.|||.            ....+.|.+||+. 
T Consensus         2 K~i~~DiDGTI~~~~~-~~y----~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~-   75 (124)
T d1xpja_           2 KKLIVDLDGTLTQANT-SDY----RNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDK-   75 (124)
T ss_dssp             CEEEECSTTTTBCCCC-SCG----GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHH-
T ss_pred             CEEEEeCCCCeECCCC-CCc----CccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHH-
Confidence            5689999999987532 222    122456799999999999999999999994            4567899999999 


Q ss_pred             ccCCccCCCCcee
Q psy12533        152 KQEDLTLPEGPML  164 (567)
Q Consensus       152 ~q~~~~LP~GPll  164 (567)
                          +++|-=-|+
T Consensus        76 ----~gI~Yd~Li   84 (124)
T d1xpja_          76 ----HQVPYDEIL   84 (124)
T ss_dssp             ----TTCCCSEEE
T ss_pred             ----cCCCceEEE
Confidence                888843343

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.18  E-value=4.4e-07  Score=86.55  Aligned_cols=121  Identities=21%  Similarity=0.283  Sum_probs=83.7

Q ss_pred             eEEEEecCCccccCCc---cc--------ccccccCcCC------------cchhHHHHHHHHHHCCceEEEEccCcccc
Q psy12533        359 KIVISDIDGTITKSDV---LG--------HVLPIMGKDW------------AQNGVTRLFTKIKENGYKLLYLSARAIGQ  415 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~---~G--------~~~~~~GkDw------------~h~Gva~l~~~i~~nGY~iiYLSaRpi~q  415 (567)
                      .+||||||-|+.-+--   .+        .-.+.-.++|            +-||+.+|++..+++|++|+|+|+|...+
T Consensus        36 ~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~  115 (209)
T d2b82a1          36 MAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTK  115 (209)
T ss_dssp             CEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred             ceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeCCchhh
Confidence            4899999999997631   00        0000111122            34599999999999999999999999999


Q ss_pred             hHHHHHHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHH
Q psy12533        416 SRVTREYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVW  492 (567)
Q Consensus       416 a~~Tr~~L~~~~Q~~~~lP~---GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~  492 (567)
                      .+.|.+.|..    ..++|.   -++++..+.-         .|..   |.+.+++        ++ +..=||+..+|+.
T Consensus       116 ~e~T~~nL~K----~lG~p~~~~~~vll~~~~~---------~K~~---rr~~Ik~--------y~-I~l~~GD~l~Df~  170 (209)
T d2b82a1         116 TETVSKTLAD----NFHIPATNMNPVIFAGDKP---------GQNT---KSQWLQD--------KN-IRIFYGDSDNDIT  170 (209)
T ss_dssp             SCCHHHHHHH----HTTCCTTTBCCCEECCCCT---------TCCC---SHHHHHH--------TT-EEEEEESSHHHHH
T ss_pred             HHHHHHHHHH----HcCCCcccccceEeeCCCC---------CchH---HHHHHHH--------cC-eEEEecCCHHHHh
Confidence            9999999853    156763   2555554321         1222   4444443        22 3456999999999


Q ss_pred             hHHHcCCCCCCE
Q psy12533        493 SYQAVGIPLSRI  504 (567)
Q Consensus       493 aY~~vGIp~~rI  504 (567)
                      +=+.+||.+-||
T Consensus       171 aA~eagi~~iRi  182 (209)
T d2b82a1         171 AARDVGARGIRI  182 (209)
T ss_dssp             HHHHTTCEEEEC
T ss_pred             HHHHcCCCceEe
Confidence            999999999887

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.16  E-value=5.8e-07  Score=85.69  Aligned_cols=121  Identities=21%  Similarity=0.313  Sum_probs=83.3

Q ss_pred             cEEEEecCCccccCCc---ccc--ccc------cccccc------------cchhHHHHHHHHHHCCceEEEEccCcccc
Q psy12533         84 KIVISDIDGTITKSDV---LGH--VLP------IMGKDW------------AQNGVTRLFTKIKENGYKLLYLSARAIGQ  140 (567)
Q Consensus        84 kiVISDIDGTITkSD~---lG~--il~------~lGkDw------------th~GVa~Ly~~i~~nGY~ilYLSaRpi~~  140 (567)
                      .+||||||-|+.-+--   .+.  +.+      .--++|            +-+|+.+|++..+++|++|+|+|+|.-.+
T Consensus        36 ~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~  115 (209)
T d2b82a1          36 MAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTK  115 (209)
T ss_dssp             CEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred             ceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeCCchhh
Confidence            3899999999997632   100  011      111122            23499999999999999999999999999


Q ss_pred             hHHHHHHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchh
Q psy12533        141 SRVTREYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVW  217 (567)
Q Consensus       141 a~~Tr~~L~~~~q~~~~LP~---GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~  217 (567)
                      .+.|...|..    ..++|.   -+|++..+.-         .|..   |.+.+++        ++ +..=||+-.+|+.
T Consensus       116 ~e~T~~nL~K----~lG~p~~~~~~vll~~~~~---------~K~~---rr~~Ik~--------y~-I~l~~GD~l~Df~  170 (209)
T d2b82a1         116 TETVSKTLAD----NFHIPATNMNPVIFAGDKP---------GQNT---KSQWLQD--------KN-IRIFYGDSDNDIT  170 (209)
T ss_dssp             SCCHHHHHHH----HTTCCTTTBCCCEECCCCT---------TCCC---SHHHHHH--------TT-EEEEEESSHHHHH
T ss_pred             HHHHHHHHHH----HcCCCcccccceEeeCCCC---------CchH---HHHHHHH--------cC-eEEEecCCHHHHh
Confidence            9999999953    156763   2555554321         1111   4444433        12 3556999999999


Q ss_pred             hhhhcCCCCCCE
Q psy12533        218 SYQAVGIPLSRI  229 (567)
Q Consensus       218 aY~~vGIp~~rI  229 (567)
                      +=+++||.+-||
T Consensus       171 aA~eagi~~iRi  182 (209)
T d2b82a1         171 AARDVGARGIRI  182 (209)
T ss_dssp             HHHHTTCEEEEC
T ss_pred             HHHHcCCCceEe
Confidence            999999988887

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.94  E-value=1e-05  Score=72.04  Aligned_cols=122  Identities=13%  Similarity=0.073  Sum_probs=73.4

Q ss_pred             CCeEEEEecCCccccCCcccccc------------cccCcCC-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVL------------PIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  423 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~------------~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L  423 (567)
                      -+|+||||.||||..+-...++.            ...++.. ..|||.++...++++||++..+|+.+.  ....+.++
T Consensus         4 ~pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~--~~~~~~~l   81 (164)
T d1u7pa_           4 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSE--IQGANQLL   81 (164)
T ss_dssp             CCSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSC--HHHHHHHH
T ss_pred             CCCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEecccc--chhhccch
Confidence            36899999999998754433321            1122222 578999999999999999999997543  23445556


Q ss_pred             HhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        424 QSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       424 ~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      +.     ..+.         ..+... ...-.++|+.|+.. ++.+    .-...- ..-+|++..|+.+=+++|+++
T Consensus        82 ~~-----~~~~---------~~~~~~-~~~~kp~~~~~~~~-~~~~----~~~~~~-~l~igD~~~di~aA~~aG~~~  138 (164)
T d1u7pa_          82 EL-----FDLG---------KYFIQR-EIYPGSKVTHFERL-HHKT----GVPFSQ-MVFFDDENRNIIDVGRLGVTC  138 (164)
T ss_dssp             HH-----TTCG---------GGCSEE-EESSSCHHHHHHHH-HHHH----CCCGGG-EEEEESCHHHHHHHHTTTCEE
T ss_pred             hc-----cccc---------ccceee-ecccCCChHHHHHH-HHHh----CCChHH-EEEEcCCHHHHHHHHHcCCEE
Confidence            54     2221         111100 00012344555433 3332    212222 234899999999999999976

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=8e-06  Score=73.66  Aligned_cols=69  Identities=19%  Similarity=0.315  Sum_probs=50.1

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  436 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G  436 (567)
                      .+.+|+||+||||..++-           ..++...+.+++++++|++++.+|||+....   +..+..     .++...
T Consensus         3 ~~~li~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~---~~~~~~-----~~~~~~   63 (232)
T d1xvia_           3 QPLLVFSDLDGTLLDSHS-----------YDWQPAAPWLTRLREANVPVILCSSKTSAEM---LYLQKT-----LGLQGL   63 (232)
T ss_dssp             CCEEEEEECTTTTSCSSC-----------CSCCTTHHHHHHHHHTTCCEEEECSSCHHHH---HHHHHH-----TTCTTS
T ss_pred             CCEEEEEECCCCccCCcC-----------cCCHHHHHHHHHHHHCCCEEEEEeCCChhhc---hhHHHH-----hccCCc
Confidence            355788999999997741           1345678899999999999999999997654   555555     445445


Q ss_pred             ceecCCCc
Q psy12533        437 PMLLNPTS  444 (567)
Q Consensus       437 Pvl~spd~  444 (567)
                      |+++...+
T Consensus        64 ~~i~~nGa   71 (232)
T d1xvia_          64 PLIAENGA   71 (232)
T ss_dssp             CEEEGGGT
T ss_pred             eEEccCCe
Confidence            56655443

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=7.4e-06  Score=76.19  Aligned_cols=106  Identities=12%  Similarity=0.171  Sum_probs=69.2

Q ss_pred             ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC-----CCchhhhhhhhhhccCh--
Q psy12533        111 WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN-----PTSLLNAFHTEVIEKKP--  183 (567)
Q Consensus       111 wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPllls-----p~~l~~al~REvi~k~p--  183 (567)
                      ..++|+.++.+.++++|++++-+|+-   .....+..++.     .+++...++.+     .++.+..    .....|  
T Consensus        82 ~l~pg~~~~i~~lk~~G~~~~ivS~~---~~~~v~~i~~~-----lgi~~~~v~an~~~~~~~G~~~g----~~~~~p~~  149 (217)
T d1nnla_          82 HLTPGIRELVSRLQERNVQVFLISGG---FRSIVEHVASK-----LNIPATNVFANRLKFYFNGEYAG----FDETQPTA  149 (217)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHH-----TTCCGGGEEEECEEECTTSCEEE----ECTTSGGG
T ss_pred             ccCHHHHHHHHHHHhCCCEEEEECCC---chHHHHHHHHH-----hCCcccceeeeeeeeeehhcccc----ceeeeeee
Confidence            35689999999999999999999984   44555666666     55554333321     1111110    011112  


Q ss_pred             -hHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCC
Q psy12533        184 -QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  235 (567)
Q Consensus       184 -~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  235 (567)
                       ..-|...++.++.-++.  .. ..++|+..+|+.|-+.+|++    +.+|++
T Consensus       150 ~~~~K~~~v~~~~~~~~~--~~-~~~vGDs~~Di~~~~~ag~~----va~~~~  195 (217)
T d1nnla_         150 ESGGKGKVIKLLKEKFHF--KK-IIMIGDGATDMEACPPADAF----IGFGGN  195 (217)
T ss_dssp             STTHHHHHHHHHHHHHCC--SC-EEEEESSHHHHTTTTTSSEE----EEECSS
T ss_pred             ccchHHHHHHHHHhccCc--cc-cEEEEeCHhhHHHHHhCCce----EEECCC
Confidence             12488888888765432  12 57899999999999999975    456654

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=2.4e-05  Score=69.51  Aligned_cols=120  Identities=14%  Similarity=0.114  Sum_probs=71.6

Q ss_pred             CCcEEEEecCCccccCCcccccccc------------cccc-ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPI------------MGKD-WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  148 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~------------lGkD-wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L  148 (567)
                      -.|+||||.||||..+-...++.+-            .++. -..+||.++...++++||++..+|+.+.  ....+.++
T Consensus         4 ~pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~--~~~~~~~l   81 (164)
T d1u7pa_           4 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSE--IQGANQLL   81 (164)
T ss_dssp             CCSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSC--HHHHHHHH
T ss_pred             CCCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEecccc--chhhccch
Confidence            4689999999999875443332111            1111 2467999999999999999999997543  23445555


Q ss_pred             HhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        149 QSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       149 ~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      +.     ..+.         ..+..   .....+|  +.|+.     +...+.-...- ..-+|++..|+.+=+++|+++
T Consensus        82 ~~-----~~~~---------~~~~~---~~~~~kp~~~~~~~-----~~~~~~~~~~~-~l~igD~~~di~aA~~aG~~~  138 (164)
T d1u7pa_          82 EL-----FDLG---------KYFIQ---REIYPGSKVTHFER-----LHHKTGVPFSQ-MVFFDDENRNIIDVGRLGVTC  138 (164)
T ss_dssp             HH-----TTCG---------GGCSE---EEESSSCHHHHHHH-----HHHHHCCCGGG-EEEEESCHHHHHHHHTTTCEE
T ss_pred             hc-----cccc---------cccee---eecccCCChHHHHH-----HHHHhCCChHH-EEEEcCCHHHHHHHHHcCCEE
Confidence            54     2221         11110   0112233  33332     22222211222 334899999999999999976

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=1.4e-05  Score=74.27  Aligned_cols=105  Identities=12%  Similarity=0.177  Sum_probs=69.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec-----CCCchhhhhhhhhhccCh---
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL-----NPTSLLNAFHTEVIEKKP---  458 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~-----spd~l~~al~rEvi~k~p---  458 (567)
                      .+||+.++++.++++||+++-+|+-...   .++..++.     .+++...++.     ..++.+...    ....|   
T Consensus        83 l~pg~~~~i~~lk~~G~~~~ivS~~~~~---~v~~i~~~-----lgi~~~~v~an~~~~~~~G~~~g~----~~~~p~~~  150 (217)
T d1nnla_          83 LTPGIRELVSRLQERNVQVFLISGGFRS---IVEHVASK-----LNIPATNVFANRLKFYFNGEYAGF----DETQPTAE  150 (217)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHH-----TTCCGGGEEEECEEECTTSCEEEE----CTTSGGGS
T ss_pred             cCHHHHHHHHHHHhCCCEEEEECCCchH---HHHHHHHH-----hCCcccceeeeeeeeeehhccccc----eeeeeeec
Confidence            5799999999999999999999985544   45666666     5666443432     122222110    11112   


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCC
Q psy12533        459 QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR  510 (567)
Q Consensus       459 ~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~  510 (567)
                      ..-|..+++.++.-++.  .. ..++|+..+|+.|-+.+|++    +.+|++
T Consensus       151 ~~~K~~~v~~~~~~~~~--~~-~~~vGDs~~Di~~~~~ag~~----va~~~~  195 (217)
T d1nnla_         151 SGGKGKVIKLLKEKFHF--KK-IIMIGDGATDMEACPPADAF----IGFGGN  195 (217)
T ss_dssp             TTHHHHHHHHHHHHHCC--SC-EEEEESSHHHHTTTTTSSEE----EEECSS
T ss_pred             cchHHHHHHHHHhccCc--cc-cEEEEeCHhhHHHHHhCCce----EEECCC
Confidence            23488888877653322  12 46899999999999999985    467764

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=1.6e-05  Score=71.70  Aligned_cols=68  Identities=19%  Similarity=0.316  Sum_probs=49.3

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      +.+|+||+||||+.++.           ...+...+.+++++++|++|+.+|||+...+   +..+..     .++...|
T Consensus         4 ~~li~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~---~~~~~~-----~~~~~~~   64 (232)
T d1xvia_           4 PLLVFSDLDGTLLDSHS-----------YDWQPAAPWLTRLREANVPVILCSSKTSAEM---LYLQKT-----LGLQGLP   64 (232)
T ss_dssp             CEEEEEECTTTTSCSSC-----------CSCCTTHHHHHHHHHTTCCEEEECSSCHHHH---HHHHHH-----TTCTTSC
T ss_pred             CEEEEEECCCCccCCcC-----------cCCHHHHHHHHHHHHCCCEEEEEeCCChhhc---hhHHHH-----hccCCce
Confidence            34788999999997752           1234577889999999999999999997654   555655     4454556


Q ss_pred             eecCCCc
Q psy12533        163 MLLNPTS  169 (567)
Q Consensus       163 lllsp~~  169 (567)
                      ++....+
T Consensus        65 ~i~~nGa   71 (232)
T d1xvia_          65 LIAENGA   71 (232)
T ss_dssp             EEEGGGT
T ss_pred             EEccCCe
Confidence            6655543

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.73  E-value=4e-05  Score=71.92  Aligned_cols=66  Identities=15%  Similarity=0.222  Sum_probs=49.9

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |+|+||+||||..++.          . ..+...+.+++++++|.+++++|||+...   ++.++..     .+++ +|+
T Consensus         2 Kli~~DlDGTLl~~~~----------~-i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~---~~~~~~~-----l~~~-~~~   61 (285)
T d1nrwa_           2 KLIAIDLDGTLLNSKH----------Q-VSLENENALRQAQRDGIEVVVSTGRAHFD---VMSIFEP-----LGIK-TWV   61 (285)
T ss_dssp             CEEEEECCCCCSCTTS----------C-CCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHGG-----GTCC-CEE
T ss_pred             eEEEEECCccccCCCC----------c-cCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHHHH-----hCCC-cEE
Confidence            7899999999997641          1 35678899999999999999999998765   4666666     4554 566


Q ss_pred             ecCCCc
Q psy12533        439 LLNPTS  444 (567)
Q Consensus       439 l~spd~  444 (567)
                      +.....
T Consensus        62 i~~nG~   67 (285)
T d1nrwa_          62 ISANGA   67 (285)
T ss_dssp             EEGGGT
T ss_pred             EecCce
Confidence            554433

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=97.71  E-value=4.8e-05  Score=71.30  Aligned_cols=147  Identities=11%  Similarity=0.109  Sum_probs=83.5

Q ss_pred             eeCCCeEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCc-----ccch---HHHHHHH-
Q psy12533        354 WRWNDKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARA-----IGQS---RVTREYL-  423 (567)
Q Consensus       354 w~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRp-----i~qa---~~Tr~~L-  423 (567)
                      +|..-++|.||.||||.+..  + +.... .|| .-|||.++.++++++||++.-+|..+     ..-.   ....+.| 
T Consensus        19 ~p~~~~Aif~DrDGtl~~~~--~-y~~~~-~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~   94 (209)
T d2o2xa1          19 FPPHLPALFLDRDGTINVDT--D-YPSDP-AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVL   94 (209)
T ss_dssp             CCSSCCCEEECSBTTTBCCC--S-CTTCG-GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCeECCC--C-CCCCH-HHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHH
Confidence            77778899999999998752  2 22111 355 57899999999999999999999643     2111   1222222 


Q ss_pred             HhcccCCccCCCCceecCCC---chhhhhhhhhhccCh--hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcC
Q psy12533        424 QSVKQEDLTLPEGPMLLNPT---SLLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVG  498 (567)
Q Consensus       424 ~~~~Q~~~~lP~GPvl~spd---~l~~al~rEvi~k~p--~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vG  498 (567)
                      +.+.+.|  +.--.++.++.   +.......+..-+||  ..|+.++ +.+. +  .-...++  .|++.+|+.+=+++|
T Consensus        95 ~~l~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~-~~~~-i--~~~~~~~--VGD~~~Di~aA~~AG  166 (209)
T d2o2xa1          95 ELLREEG--VFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAG-KRLA-L--DLQRSLI--VGDKLADMQAGKRAG  166 (209)
T ss_dssp             HHHHHTT--CCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHH-HHHT-C--CGGGCEE--EESSHHHHHHHHHTT
T ss_pred             HHhhhcc--cccceEEEecccccccccccccccccccccchhhhHhH-HHhC-C--CccceEE--eCCCHHHHHHHHHCC
Confidence            2333333  22222222221   111011111112344  5665554 2221 1  1234555  457899999999999


Q ss_pred             CCCCCEEEEcCCCccc
Q psy12533        499 IPLSRIFTINSRGEVK  514 (567)
Q Consensus       499 Ip~~rIF~In~~g~~~  514 (567)
                      +.  -|++.+..++..
T Consensus       167 i~--~i~v~~g~~~~~  180 (209)
T d2o2xa1         167 LA--QGWLVDGEAAVQ  180 (209)
T ss_dssp             CS--EEEEETCCCEEE
T ss_pred             Cc--EEEEeCCCCccc
Confidence            84  477777766554

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=97.65  E-value=4.1e-06  Score=76.54  Aligned_cols=106  Identities=13%  Similarity=0.136  Sum_probs=61.4

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC----ceecCCCchhhhhh-hhh-hccCh-h
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG----PMLLNPTSLLNAFH-TEV-IEKKP-Q  459 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G----Pvl~spd~l~~al~-rEv-i~k~p-~  459 (567)
                      ..||+.++++.++++|+++.-+|+   +....++.+|+.     +++++-    .+....++....+. .+. ...++ .
T Consensus        76 l~pg~~~~l~~L~~~g~~~~ivS~---~~~~~i~~~l~~-----l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~  147 (226)
T d2feaa1          76 IREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLEG-----IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG  147 (226)
T ss_dssp             BCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHTT-----TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred             hhHHHHHHHHHHHhcccccccCCc---chhhhHHHHHHH-----cCCccceeeeeEEEeCCcceeccccccccccccCCH
Confidence            467999999999999999999998   455666777765     333321    11222222111000 000 01111 2


Q ss_pred             HHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcC
Q psy12533        460 EFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS  509 (567)
Q Consensus       460 ~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~  509 (567)
                      .-|...++.+..    ...- +..+|+..+|+.|-+++|+    .|.+++
T Consensus       148 ~~~~~~~~~~~~----~~~~-~i~iGDs~~Dl~~a~~A~~----~~a~~~  188 (226)
T d2feaa1         148 CCKPSVIHELSE----PNQY-IIMIGDSVTDVEAAKLSDL----CFARDY  188 (226)
T ss_dssp             SCHHHHHHHHCC----TTCE-EEEEECCGGGHHHHHTCSE----EEECHH
T ss_pred             HHHHHHHHHhcC----CCce-EEEEeCchhhHHHHHHCCE----EEEecc
Confidence            224445555433    1222 4589999999999999996    555555

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.63  E-value=1.4e-05  Score=70.63  Aligned_cols=145  Identities=16%  Similarity=0.185  Sum_probs=77.8

Q ss_pred             CCeEEEEecCCccccCCcccccccc-------------------------------------------cCcCCcchhHHH
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPI-------------------------------------------MGKDWAQNGVTR  393 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~-------------------------------------------~GkDw~h~Gva~  393 (567)
                      ..|+|+||+||||+.|+.+-.+.-.                                           ......++|+.+
T Consensus         3 kkKlv~FDlDGTL~d~es~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (210)
T d1j97a_           3 KKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEE   82 (210)
T ss_dssp             CCCEEEECCCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHTCCBCTTHHH
T ss_pred             CCeEEEEeCCCCcCCchHHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHHhhhHHHHHHHHhhhhhhhhhHHH
Confidence            4699999999999998853211000                                           111234668888


Q ss_pred             HHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhC
Q psy12533        394 LFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALF  473 (567)
Q Consensus       394 l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf  473 (567)
                      ++..+..+|+.++.+|+........+..-......      ....+...+.....-.-+...+  ..-|...+..+....
T Consensus        83 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  154 (210)
T d1j97a_          83 TIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA------FANRLIVKDGKLTGDVEGEVLK--ENAKGEILEKIAKIE  154 (210)
T ss_dssp             HHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEE------EEEEEEEETTEEEEEEECSSCS--TTHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCEEEeecccccccccchhhccchhhh------hhhhhccccccccccccccccc--cccccchhhhHHHHh
Confidence            99999999999999998765555444332221000      0000000111110000011111  111223333333222


Q ss_pred             CCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccc
Q psy12533        474 PPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK  514 (567)
Q Consensus       474 ~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~  514 (567)
                      ...... ..+||+..+|+.|.+.+|++    +.+|+.-+++
T Consensus       155 ~~~~~~-~i~iGDs~nDi~m~~~ag~~----va~na~~~lk  190 (210)
T d1j97a_         155 GINLED-TVAVGDGANDISMFKKAGLK----IAFCAKPILK  190 (210)
T ss_dssp             TCCGGG-EEEEESSGGGHHHHHHCSEE----EEESCCHHHH
T ss_pred             cccccc-eEEecCCcChHHHHHHCCCC----EEECCCHHHH
Confidence            112223 46899999999999999987    3458765554

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=97.62  E-value=8.4e-06  Score=74.43  Aligned_cols=106  Identities=13%  Similarity=0.141  Sum_probs=60.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC----CceecCCCchhhhhh-hhh-h-ccChh
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE----GPMLLNPTSLLNAFH-TEV-I-EKKPQ  184 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~----GPlllsp~~l~~al~-REv-i-~k~p~  184 (567)
                      ..+|+.++++.++++|+++.-+|+   +....++..|+.     .+++.    ..+....++....+. ... . .+...
T Consensus        76 l~pg~~~~l~~L~~~g~~~~ivS~---~~~~~i~~~l~~-----l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~  147 (226)
T d2feaa1          76 IREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLEG-----IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG  147 (226)
T ss_dssp             BCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHTT-----TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred             hhHHHHHHHHHHHhcccccccCCc---chhhhHHHHHHH-----cCCccceeeeeEEEeCCcceeccccccccccccCCH
Confidence            356999999999999999999998   566677777766     33322    011111111110000 000 0 11111


Q ss_pred             HHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcC
Q psy12533        185 EFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS  234 (567)
Q Consensus       185 ~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~  234 (567)
                      .-|...++.+...    ..- +..+|+..+|+.|-+++|+    .|.+++
T Consensus       148 ~~~~~~~~~~~~~----~~~-~i~iGDs~~Dl~~a~~A~~----~~a~~~  188 (226)
T d2feaa1         148 CCKPSVIHELSEP----NQY-IIMIGDSVTDVEAAKLSDL----CFARDY  188 (226)
T ss_dssp             SCHHHHHHHHCCT----TCE-EEEEECCGGGHHHHHTCSE----EEECHH
T ss_pred             HHHHHHHHHhcCC----Cce-EEEEeCchhhHHHHHHCCE----EEEecc
Confidence            2244444444322    122 5688999999999999996    455544

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.61  E-value=3.6e-05  Score=69.28  Aligned_cols=52  Identities=17%  Similarity=0.272  Sum_probs=42.1

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHH
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTRE  421 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~  421 (567)
                      |+|+||+||||+.++.           ..++-+.+.+++++++|.+++.+|||+.........
T Consensus         3 K~i~~D~DGTL~~~~~-----------~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~   54 (230)
T d1wr8a_           3 KAISIDIDGTITYPNR-----------MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASI   54 (230)
T ss_dssp             CEEEEESTTTTBCTTS-----------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHH
T ss_pred             eEEEEecCCCCcCCCC-----------ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHH
Confidence            7899999999997631           235678899999999999999999999866644433

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2e-05  Score=71.13  Aligned_cols=47  Identities=13%  Similarity=0.226  Sum_probs=37.8

Q ss_pred             CCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533        356 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG  414 (567)
Q Consensus       356 ~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~  414 (567)
                      |+.|+|+|||||||+.++.  +         ..+...+.+++++++|. ++.+|||+..
T Consensus         1 ~~~kl~~fDlDGTLl~~~~--~---------i~~~~~~al~~l~~~g~-~~i~Tgr~~~   47 (243)
T d2amya1           1 PGPALCLFDVDGTLTAPRQ--K---------ITKEMDDFLQKLRQKIK-IGVVGGSDFE   47 (243)
T ss_dssp             CCSEEEEEESBTTTBCTTS--C---------CCHHHHHHHHHHTTTSE-EEEECSSCHH
T ss_pred             CCCEEEEEcCcCCeeCCCC--c---------CCHHHHHHHHHHHcCCC-EEEEcCCChH
Confidence            5789999999999998742  1         24568889999999885 7789999743

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.58  E-value=3.9e-05  Score=71.97  Aligned_cols=55  Identities=18%  Similarity=0.257  Sum_probs=43.0

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHH
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREY  422 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~  422 (567)
                      +|+|+||+||||...+          ..-.++...+.+++++++|.+|+++|||+........+.
T Consensus         1 ~k~if~DlDGTL~~~~----------~~~i~~~~~~al~~l~~~gi~v~~~TGR~~~~~~~l~~~   55 (260)
T d2rbka1           1 TKALFFDIDGTLVSFE----------THRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSEL   55 (260)
T ss_dssp             CCEEEECSBTTTBCTT----------TSSCCHHHHHHHHHHHHTTCEEEEECSSCGGGCCSCHHH
T ss_pred             CeEEEEECCCCCcCCC----------CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence            5899999999998653          112345678899999999999999999997766554443

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.55  E-value=3.8e-05  Score=72.10  Aligned_cols=65  Identities=15%  Similarity=0.222  Sum_probs=48.7

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      |+|+||+||||+.++.  .         ..+...+.+++++++|.+++++|||+...   ++.++..     .+++ +|+
T Consensus         2 Kli~~DlDGTLl~~~~--~---------i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~---~~~~~~~-----l~~~-~~~   61 (285)
T d1nrwa_           2 KLIAIDLDGTLLNSKH--Q---------VSLENENALRQAQRDGIEVVVSTGRAHFD---VMSIFEP-----LGIK-TWV   61 (285)
T ss_dssp             CEEEEECCCCCSCTTS--C---------CCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHGG-----GTCC-CEE
T ss_pred             eEEEEECCccccCCCC--c---------cCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHHHH-----hCCC-cEE
Confidence            7899999999997652  1         24567889999999999999999998754   4667766     4443 455


Q ss_pred             ecCCC
Q psy12533        164 LLNPT  168 (567)
Q Consensus       164 llsp~  168 (567)
                      +....
T Consensus        62 i~~nG   66 (285)
T d1nrwa_          62 ISANG   66 (285)
T ss_dssp             EEGGG
T ss_pred             EecCc
Confidence            54443

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.52  E-value=5.4e-05  Score=68.08  Aligned_cols=50  Identities=18%  Similarity=0.302  Sum_probs=40.6

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHH
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVT  144 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~T  144 (567)
                      |+|+||+||||+.++.           .-++-+.+.+++++++|.+++.+|+|+.......
T Consensus         3 K~i~~D~DGTL~~~~~-----------~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~   52 (230)
T d1wr8a_           3 KAISIDIDGTITYPNR-----------MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAA   52 (230)
T ss_dssp             CEEEEESTTTTBCTTS-----------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHH
T ss_pred             eEEEEecCCCCcCCCC-----------ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHH
Confidence            7899999999997642           1246678899999999999999999997665443

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=97.50  E-value=0.00011  Score=68.73  Aligned_cols=148  Identities=11%  Similarity=0.120  Sum_probs=80.3

Q ss_pred             ecCCCcEEEEecCCccccCCccccccccccccc-cchhHHHHHHHHHHCCceEEEEccCc-----cc---chHHHHHHH-
Q psy12533         79 WRWNDKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARA-----IG---QSRVTREYL-  148 (567)
Q Consensus        79 w~~~~kiVISDIDGTITkSD~lG~il~~lGkDw-th~GVa~Ly~~i~~nGY~ilYLSaRp-----i~---~a~~Tr~~L-  148 (567)
                      +|..-++|++|.||||.+..  + +.... .+| .-+||.++.+.++++||++.-+|-.+     ..   ..+...+.| 
T Consensus        19 ~p~~~~Aif~DrDGtl~~~~--~-y~~~~-~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~   94 (209)
T d2o2xa1          19 FPPHLPALFLDRDGTINVDT--D-YPSDP-AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVL   94 (209)
T ss_dssp             CCSSCCCEEECSBTTTBCCC--S-CTTCG-GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCeECCC--C-CCCCH-HHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHH
Confidence            56667899999999998752  2 21111 233 45799999999999999999999643     21   112222222 


Q ss_pred             HhcccCCccCCCCceecCCC---chhhhhhhhhhccCh--hHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcC
Q psy12533        149 QSVKQEDLTLPEGPMLLNPT---SLLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVG  223 (567)
Q Consensus       149 ~~~~q~~~~LP~GPlllsp~---~l~~al~REvi~k~p--~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vG  223 (567)
                      +.+.+.|  +..-.++..+.   +.......+...+||  .-|+.++ +.+ ++ .. ..-++.|  ++.+|+.+=+++|
T Consensus        95 ~~l~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~-~~~-~i-~~-~~~~~VG--D~~~Di~aA~~AG  166 (209)
T d2o2xa1          95 ELLREEG--VFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAG-KRL-AL-DL-QRSLIVG--DKLADMQAGKRAG  166 (209)
T ss_dssp             HHHHHTT--CCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHH-HHH-TC-CG-GGCEEEE--SSHHHHHHHHHTT
T ss_pred             HHhhhcc--cccceEEEecccccccccccccccccccccchhhhHhH-HHh-CC-Cc-cceEEeC--CCHHHHHHHHHCC
Confidence            2233332  22112222211   111000111122344  3444443 222 11 11 3455644  6799999999999


Q ss_pred             CCCCCEEEEcCCCceec
Q psy12533        224 IPLSRIFTINSRGEVKH  240 (567)
Q Consensus       224 Ip~~rIF~In~~g~~~~  240 (567)
                      +.  -|+..+..++...
T Consensus       167 i~--~i~v~~g~~~~~~  181 (209)
T d2o2xa1         167 LA--QGWLVDGEAAVQP  181 (209)
T ss_dssp             CS--EEEEETCCCEEET
T ss_pred             Cc--EEEEeCCCCcccC
Confidence            85  4677777666543

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.48  E-value=2.7e-05  Score=68.83  Aligned_cols=111  Identities=16%  Similarity=0.179  Sum_probs=57.9

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC--CccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE--DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~--~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~  190 (567)
                      +.|+.++...+..+|+.++.+|+...........-......-  ......+.......        +...+  ..-|...
T Consensus        77 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~  146 (210)
T d1j97a_          77 TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVE--------GEVLK--ENAKGEI  146 (210)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEE--------CSSCS--TTHHHHH
T ss_pred             hhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccccccccc--------ccccc--cccccch
Confidence            447888899999999999999987655554443332211000  00011111110000        00011  1113333


Q ss_pred             HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCce
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  238 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  238 (567)
                      +..+.....-.... ..+||+..+|+.|.+.+|++    +.+|+.-++
T Consensus       147 ~~~~~~~~~~~~~~-~i~iGDs~nDi~m~~~ag~~----va~na~~~l  189 (210)
T d1j97a_         147 LEKIAKIEGINLED-TVAVGDGANDISMFKKAGLK----IAFCAKPIL  189 (210)
T ss_dssp             HHHHHHHHTCCGGG-EEEEESSGGGHHHHHHCSEE----EEESCCHHH
T ss_pred             hhhHHHHhcccccc-eEEecCCcChHHHHHHCCCC----EEECCCHHH
Confidence            33333322211223 56899999999999999986    335776444

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.46  E-value=5.9e-05  Score=70.64  Aligned_cols=56  Identities=20%  Similarity=0.270  Sum_probs=42.7

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  148 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L  148 (567)
                      +|+|+||+|||+...+  ++        -.++...+.+++++++|.+|+++|||+........+.+
T Consensus         1 ~k~if~DlDGTL~~~~--~~--------~i~~~~~~al~~l~~~gi~v~~~TGR~~~~~~~l~~~~   56 (260)
T d2rbka1           1 TKALFFDIDGTLVSFE--TH--------RIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQ   56 (260)
T ss_dssp             CCEEEECSBTTTBCTT--TS--------SCCHHHHHHHHHHHHTTCEEEEECSSCGGGCCSCHHHH
T ss_pred             CeEEEEECCCCCcCCC--CC--------CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
Confidence            5899999999998654  11        12345678899999999999999999977665544433

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.45  E-value=5.6e-05  Score=69.29  Aligned_cols=54  Identities=19%  Similarity=0.318  Sum_probs=44.6

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  423 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L  423 (567)
                      |+|+||+|||||.++           .-..+++.+.+++++++|.+++..|||+...++..+.++
T Consensus         4 Kli~~D~DGTL~~~~-----------~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~   57 (225)
T d1l6ra_           4 RLAAIDVDGNLTDRD-----------RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFL   57 (225)
T ss_dssp             CEEEEEHHHHSBCTT-----------SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred             EEEEEecCCCCcCCC-----------CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHc
Confidence            789999999999653           223578999999999999999999999987766666555

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=5.7e-05  Score=68.01  Aligned_cols=55  Identities=24%  Similarity=0.340  Sum_probs=41.7

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARA  412 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRp  412 (567)
                      .|+|+||.||||.......++....-+=..-|||.++.++++++||++..+|..+
T Consensus         2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~   56 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQD   56 (161)
T ss_dssp             CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred             CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHHcCCceeeecccc
Confidence            6899999999999875554444222211246899999999999999999999764

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=9.6e-05  Score=68.88  Aligned_cols=68  Identities=18%  Similarity=0.298  Sum_probs=50.7

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      -|+|+||+||||+.++-          . .++...+.+++++++|.+++.+|||+.....   .++..   -+...|.+.
T Consensus         4 iKli~~DlDGTL~~~~~----------~-i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~---~~~~~---l~l~~~~~~   66 (271)
T d1rkqa_           4 IKLIAIDMDGTLLLPDH----------T-ISPAVKNAIAAARARGVNVVLTTGRPYAGVH---NYLKE---LHMEQPGDY   66 (271)
T ss_dssp             CCEEEECCCCCCSCTTS----------C-CCHHHHHHHHHHHHTTCEEEEECSSCGGGTH---HHHHH---TTCCSTTCE
T ss_pred             eeEEEEeCCccccCCCC----------c-cCHHHHHHHHHHHHCCCEEEEECCCCHHHHH---HHHHH---hcCcCCCcE
Confidence            58899999999987641          1 3577899999999999999999999986663   33333   234566666


Q ss_pred             eecCC
Q psy12533        438 MLLNP  442 (567)
Q Consensus       438 vl~sp  442 (567)
                      ++...
T Consensus        67 ~i~~n   71 (271)
T d1rkqa_          67 CITYN   71 (271)
T ss_dssp             EEEGG
T ss_pred             EEEcC
Confidence            66543

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=0.00018  Score=64.90  Aligned_cols=132  Identities=17%  Similarity=0.295  Sum_probs=74.9

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcc--------cchHHHHHHHHh-cc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAI--------GQSRVTREYLQS-VK  427 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi--------~qa~~Tr~~L~~-~~  427 (567)
                      -++|+||.||||....  | +.... .|| .=+||.++.+.++++||+++-+|..+.        .+......|+.. +.
T Consensus         2 ~~Av~~DrDGtl~~~~--~-y~~~~-~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~   77 (182)
T d2gmwa1           2 VPAIFLDRDGTINVDH--G-YVHEI-DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLA   77 (182)
T ss_dssp             BCEEEECSBTTTBCCC--S-SCCSG-GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCccCCC--C-CCCCH-HHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhh
Confidence            3789999999998642  2 21111 345 468999999999999999999999763        122222333332 22


Q ss_pred             cCCccCCCCceecC---CCchhhhhhhhhhccCh--hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        428 QEDLTLPEGPMLLN---PTSLLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       428 Q~~~~lP~GPvl~s---pd~l~~al~rEvi~k~p--~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      +.+..+.  .+...   |+.-+..+..+...++|  +-+..+ ++.+. +  .-...++  .|++.+|+.|=+++|+..
T Consensus        78 ~~~~~~~--~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~-~~~~~-i--~~~~s~m--VGDs~~Di~aA~~Ag~~~  148 (182)
T d2gmwa1          78 DRDVDLD--GIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSA-RDYLH-I--DMAASYM--VGDKLEDMQAAVAANVGT  148 (182)
T ss_dssp             HTTCCCS--EEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHH-HHHHT-B--CGGGCEE--EESSHHHHHHHHHTTCSE
T ss_pred             hhccccc--ceeecccccccccccccccccccCCccccccch-hhhcc-c--ccccccc--cCCCHHHHHHHHHhCCCc
Confidence            3332221  11111   22222333344444566  444333 23322 1  1133444  458899999999999963

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.37  E-value=0.00013  Score=66.25  Aligned_cols=51  Identities=16%  Similarity=0.441  Sum_probs=40.2

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  425 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~  425 (567)
                      |+|++||||||..+.           .  .+-..+.+++++++|.+|+.+|||+...   +..++..
T Consensus         3 Kli~~DlDGTLl~~~-----------~--~~~~~~ai~~l~~~G~~~~~aTGR~~~~---~~~~~~~   53 (243)
T d1wzca1           3 RLIFLDIDKTLIPGY-----------E--PDPAKPIIEELKDMGFEIIFNSSKTRAE---QEYYRKE   53 (243)
T ss_dssp             EEEEECCBTTTBSSS-----------C--SGGGHHHHHHHHHTTEEEEEECSSCHHH---HHHHHHH
T ss_pred             EEEEEeCCCCCCCCC-----------C--CHHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHH
Confidence            789999999998542           1  2346789999999999999999998754   4566666

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=6.9e-05  Score=69.96  Aligned_cols=48  Identities=25%  Similarity=0.445  Sum_probs=40.4

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  416 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa  416 (567)
                      |+|+||+||||+.++          +.-.++.+.+..++++++|.+++.+|||+....
T Consensus         3 Kli~~DlDGTLl~~~----------~~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~   50 (269)
T d1rlma_           3 KVIVTDMDGTFLNDA----------KTYNQPRFMAQYQELKKRGIKFVVASGNQYYQL   50 (269)
T ss_dssp             CEEEECCCCCCSCTT----------SCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHH
T ss_pred             EEEEEeCCccCcCCC----------CcCChHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            789999999999773          333467899999999999999999999987443

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=97.31  E-value=0.00018  Score=66.96  Aligned_cols=68  Identities=18%  Similarity=0.281  Sum_probs=50.0

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      -|+|+||+||||+.++-  .         -++...+.+++++++|.+++.+|||+......   ++..   -+...|.+.
T Consensus         4 iKli~~DlDGTL~~~~~--~---------i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~---~~~~---l~l~~~~~~   66 (271)
T d1rkqa_           4 IKLIAIDMDGTLLLPDH--T---------ISPAVKNAIAAARARGVNVVLTTGRPYAGVHN---YLKE---LHMEQPGDY   66 (271)
T ss_dssp             CCEEEECCCCCCSCTTS--C---------CCHHHHHHHHHHHHTTCEEEEECSSCGGGTHH---HHHH---TTCCSTTCE
T ss_pred             eeEEEEeCCccccCCCC--c---------cCHHHHHHHHHHHHCCCEEEEECCCCHHHHHH---HHHH---hcCcCCCcE
Confidence            47899999999987641  1         24678899999999999999999999876643   3333   234566666


Q ss_pred             eecCC
Q psy12533        163 MLLNP  167 (567)
Q Consensus       163 lllsp  167 (567)
                      ++...
T Consensus        67 ~i~~n   71 (271)
T d1rkqa_          67 CITYN   71 (271)
T ss_dssp             EEEGG
T ss_pred             EEEcC
Confidence            66543

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.28  E-value=6.2e-05  Score=70.03  Aligned_cols=52  Identities=17%  Similarity=0.120  Sum_probs=39.9

Q ss_pred             CCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchH
Q psy12533        356 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR  417 (567)
Q Consensus       356 ~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~  417 (567)
                      .+=|+|+||+||||+... -+         -..+.+.+.+.+++++|.+++.+|||+..-+.
T Consensus         8 ~~ikli~~DlDGTLl~~~-~~---------~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~   59 (283)
T d2b30a1           8 ADIKLLLIDFDGTLFVDK-DI---------KVPSENIDAIKEAIEKGYMVSICTGRSKVGIL   59 (283)
T ss_dssp             CCCCEEEEETBTTTBCCT-TT---------CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHH
T ss_pred             cCccEEEEECCCCCcCCC-CC---------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence            355789999999997431 01         13567788889999999999999999976653

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.0001  Score=66.22  Aligned_cols=46  Identities=13%  Similarity=0.237  Sum_probs=36.2

Q ss_pred             CCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcc
Q psy12533         81 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAI  138 (567)
Q Consensus        81 ~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi  138 (567)
                      ++.|+|||||||||+.++.  +         ..+...+..++++++|. ++++|||+.
T Consensus         1 ~~~kl~~fDlDGTLl~~~~--~---------i~~~~~~al~~l~~~g~-~~i~Tgr~~   46 (243)
T d2amya1           1 PGPALCLFDVDGTLTAPRQ--K---------ITKEMDDFLQKLRQKIK-IGVVGGSDF   46 (243)
T ss_dssp             CCSEEEEEESBTTTBCTTS--C---------CCHHHHHHHHHHTTTSE-EEEECSSCH
T ss_pred             CCCEEEEEcCcCCeeCCCC--c---------CCHHHHHHHHHHHcCCC-EEEEcCCCh
Confidence            5789999999999998742  1         23467888888988885 778999964

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.28  E-value=0.00017  Score=65.41  Aligned_cols=65  Identities=18%  Similarity=0.397  Sum_probs=46.9

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      |+|++||||||..+..             .+-..+.+++++++|.+|+.+|||+..   .+..+++.     .++ .+|+
T Consensus         3 Kli~~DlDGTLl~~~~-------------~~~~~~ai~~l~~~G~~~~~aTGR~~~---~~~~~~~~-----~~~-~~~~   60 (243)
T d1wzca1           3 RLIFLDIDKTLIPGYE-------------PDPAKPIIEELKDMGFEIIFNSSKTRA---EQEYYRKE-----LEV-ETPF   60 (243)
T ss_dssp             EEEEECCBTTTBSSSC-------------SGGGHHHHHHHHHTTEEEEEECSSCHH---HHHHHHHH-----HTC-CSCE
T ss_pred             EEEEEeCCCCCCCCCC-------------CHHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHH-----hcc-cccc
Confidence            7899999999985421             123568899999999999999999874   44666666     334 3566


Q ss_pred             ecCCCch
Q psy12533        164 LLNPTSL  170 (567)
Q Consensus       164 llsp~~l  170 (567)
                      ++...+.
T Consensus        61 i~~nGa~   67 (243)
T d1wzca1          61 ISENGSA   67 (243)
T ss_dssp             EETTTTE
T ss_pred             cccCCcE
Confidence            6555433

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=9e-05  Score=69.14  Aligned_cols=48  Identities=25%  Similarity=0.445  Sum_probs=39.9

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS  141 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a  141 (567)
                      |+|+||+||||+.++          +.-.++.+.+..++++++|.+++.+|||+....
T Consensus         3 Kli~~DlDGTLl~~~----------~~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~   50 (269)
T d1rlma_           3 KVIVTDMDGTFLNDA----------KTYNQPRFMAQYQELKKRGIKFVVASGNQYYQL   50 (269)
T ss_dssp             CEEEECCCCCCSCTT----------SCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHH
T ss_pred             EEEEEeCCccCcCCC----------CcCChHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            789999999999774          223456788999999999999999999987443

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.23  E-value=0.00012  Score=66.92  Aligned_cols=55  Identities=18%  Similarity=0.289  Sum_probs=43.6

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  148 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L  148 (567)
                      -|+|+||+|||||.++           .-..+++.+.++.++++|.+++.+|+|+...++..+.++
T Consensus         3 iKli~~D~DGTL~~~~-----------~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~   57 (225)
T d1l6ra_           3 IRLAAIDVDGNLTDRD-----------RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFL   57 (225)
T ss_dssp             CCEEEEEHHHHSBCTT-----------SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred             eEEEEEecCCCCcCCC-----------CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHc
Confidence            3789999999999653           112468899999999999999999999987665555444

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.00011  Score=66.04  Aligned_cols=55  Identities=24%  Similarity=0.340  Sum_probs=41.6

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARA  137 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRp  137 (567)
                      .|+|++|.||||.......++.....+=..-|||.++..+++++||++..+|..+
T Consensus         2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~   56 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQD   56 (161)
T ss_dssp             CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred             CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHHcCCceeeecccc
Confidence            5899999999999875554544322222345799999999999999999999764

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.0004  Score=62.54  Aligned_cols=133  Identities=19%  Similarity=0.314  Sum_probs=72.6

Q ss_pred             CcEEEEecCCccccCCccccccccccccc-cchhHHHHHHHHHHCCceEEEEccCcc--------cchHHHHHHHHh-cc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAI--------GQSRVTREYLQS-VK  152 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDw-th~GVa~Ly~~i~~nGY~ilYLSaRpi--------~~a~~Tr~~L~~-~~  152 (567)
                      -++|++|.||||....  |.+. .. .+| .-+||.++.+.++++||+++-+|..+.        ........|+.. +.
T Consensus         2 ~~Av~~DrDGtl~~~~--~y~~-~~-~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~   77 (182)
T d2gmwa1           2 VPAIFLDRDGTINVDH--GYVH-EI-DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLA   77 (182)
T ss_dssp             BCEEEECSBTTTBCCC--SSCC-SG-GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCccCCC--CCCC-CH-HHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhh
Confidence            4789999999998642  2211 11 232 346999999999999999999998762        222223333332 22


Q ss_pred             cCCccCCCCceecC---CCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCC-CCCEEEecCCcccchhhhhhcCCCC
Q psy12533        153 QEDLTLPEGPMLLN---PTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       153 q~~~~LP~GPllls---p~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      +.|..+.  .+...   |+.-+..+.++...++|+-   .++..+...+.-+ ..-++.|  ++.+|+.|=+++|+..
T Consensus        78 ~~~~~~~--~~~~cp~~p~~~~~~~~~~~~~rKP~p---~m~~~~~~~~~i~~~~s~mVG--Ds~~Di~aA~~Ag~~~  148 (182)
T d2gmwa1          78 DRDVDLD--GIYYCPHHPQGSVEEFRQVCDCRKPHP---GMLLSARDYLHIDMAASYMVG--DKLEDMQAAVAANVGT  148 (182)
T ss_dssp             HTTCCCS--EEEEECCBTTCSSGGGBSCCSSSTTSC---HHHHHHHHHHTBCGGGCEEEE--SSHHHHHHHHHTTCSE
T ss_pred             hhccccc--ceeecccccccccccccccccccCCcc---ccccchhhhcccccccccccC--CCHHHHHHHHHhCCCc
Confidence            2222221  11111   2222222333334456633   2222222222211 3445544  7799999999999864

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.13  E-value=0.00022  Score=66.91  Aligned_cols=64  Identities=14%  Similarity=0.232  Sum_probs=44.2

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |+|+|||||||+.++.  +         ..+-..+.+++++++| +++.+|||+....   +..+..     .....+|+
T Consensus         3 Kli~~DlDGTL~~~~~--~---------i~~~~~~al~~l~~~~-~~~i~TGR~~~~~---~~~~~~-----~~~~~~~~   62 (267)
T d1nf2a_           3 RVFVFDLDGTLLNDNL--E---------ISEKDRRNIEKLSRKC-YVVFASGRMLVST---LNVEKK-----YFKRTFPT   62 (267)
T ss_dssp             CEEEEECCCCCSCTTS--C---------CCHHHHHHHHHHTTTS-EEEEECSSCHHHH---HHHHHH-----HSSSCCCE
T ss_pred             EEEEEeCCccccCCcC--c---------cCHHHHHHHHHHHcCC-EEEEECCCChHHH---HHHHHH-----hcccCCce
Confidence            7899999999997741  1         2356777888888877 6889999986543   444444     33445566


Q ss_pred             ecCC
Q psy12533        439 LLNP  442 (567)
Q Consensus       439 l~sp  442 (567)
                      +++.
T Consensus        63 I~~n   66 (267)
T d1nf2a_          63 IAYN   66 (267)
T ss_dssp             EEGG
T ss_pred             eccC
Confidence            6543

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.08  E-value=0.00023  Score=66.03  Aligned_cols=52  Identities=17%  Similarity=0.146  Sum_probs=39.2

Q ss_pred             CCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchH
Q psy12533         81 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR  142 (567)
Q Consensus        81 ~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~  142 (567)
                      .+-|+|+||+||||+... -++         ..+...+...+++++|.+++.+|||+..-+.
T Consensus         8 ~~ikli~~DlDGTLl~~~-~~~---------i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~   59 (283)
T d2b30a1           8 ADIKLLLIDFDGTLFVDK-DIK---------VPSENIDAIKEAIEKGYMVSICTGRSKVGIL   59 (283)
T ss_dssp             CCCCEEEEETBTTTBCCT-TTC---------SCHHHHHHHHHHHHHTCEEEEECSSCHHHHH
T ss_pred             cCccEEEEECCCCCcCCC-CCc---------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence            456899999999997421 111         2446777888889999999999999976553

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=0.00045  Score=64.65  Aligned_cols=64  Identities=22%  Similarity=0.371  Sum_probs=47.6

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG  161 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G  161 (567)
                      -|.|+||+||||..++          +  .-+|+.+.++.++++|+++++||..+--..+..++.|..   -|..+|..
T Consensus         3 ik~VifDlDGTL~~~~----------~--~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~---~G~~~~~~   66 (250)
T d2c4na1           3 IKNVICDIDGVLMHDN----------V--AVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFAT---AGVDVPDS   66 (250)
T ss_dssp             CCEEEEECBTTTEETT----------E--ECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHH---TTCCCCGG
T ss_pred             CCEEEEECCCeeEECC----------C--cCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhh---ccccccce
Confidence            4789999999998663          1  235788999999999999999997666666666666655   34444433

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=96.97  E-value=0.00052  Score=64.19  Aligned_cols=67  Identities=21%  Similarity=0.349  Sum_probs=46.3

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      -|.|+||+||||..++            ..-+++.+.++.++++|++++++|..+.-.....++.|..   -|..+|...
T Consensus         3 ik~VifDlDGTL~~~~------------~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~---~G~~~~~~~   67 (250)
T d2c4na1           3 IKNVICDIDGVLMHDN------------VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFAT---AGVDVPDSV   67 (250)
T ss_dssp             CCEEEEECBTTTEETT------------EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHH---TTCCCCGGG
T ss_pred             CCEEEEECCCeeEECC------------CcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhh---cccccccee
Confidence            4789999999998653            1236889999999999999999996655444444444433   344444444


Q ss_pred             ee
Q psy12533        438 ML  439 (567)
Q Consensus       438 vl  439 (567)
                      ++
T Consensus        68 i~   69 (250)
T d2c4na1          68 FY   69 (250)
T ss_dssp             EE
T ss_pred             Ee
Confidence            33

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=96.97  E-value=0.00036  Score=65.34  Aligned_cols=64  Identities=14%  Similarity=0.252  Sum_probs=43.2

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      |+|+|||||||+.++.  ++         .+-..+.+++++++| +++.+|||+....   +..+..     .....+|+
T Consensus         3 Kli~~DlDGTL~~~~~--~i---------~~~~~~al~~l~~~~-~~~i~TGR~~~~~---~~~~~~-----~~~~~~~~   62 (267)
T d1nf2a_           3 RVFVFDLDGTLLNDNL--EI---------SEKDRRNIEKLSRKC-YVVFASGRMLVST---LNVEKK-----YFKRTFPT   62 (267)
T ss_dssp             CEEEEECCCCCSCTTS--CC---------CHHHHHHHHHHTTTS-EEEEECSSCHHHH---HHHHHH-----HSSSCCCE
T ss_pred             EEEEEeCCccccCCcC--cc---------CHHHHHHHHHHHcCC-EEEEECCCChHHH---HHHHHH-----hcccCCce
Confidence            7899999999997752  21         245667778888877 6889999986443   444444     33445566


Q ss_pred             ecCC
Q psy12533        164 LLNP  167 (567)
Q Consensus       164 llsp  167 (567)
                      +...
T Consensus        63 I~~n   66 (267)
T d1nf2a_          63 IAYN   66 (267)
T ss_dssp             EEGG
T ss_pred             eccC
Confidence            6543

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.96  E-value=0.00046  Score=64.47  Aligned_cols=66  Identities=17%  Similarity=0.284  Sum_probs=47.9

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      |.|+||+||||-.++            ...+++++.+++++++|.++++||.++..-.....+.|...  .|..+|..-+
T Consensus         3 k~v~fDlDGTL~~~~------------~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~--~~~~~~~~~i   68 (253)
T d1yv9a1           3 QGYLIDLDGTIYLGK------------EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANE--FDIHVPASLV   68 (253)
T ss_dssp             CEEEECCBTTTEETT------------EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHH--SCCCCCGGGE
T ss_pred             CEEEEcCCCccEeCC------------CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHh--cCCccccccc
Confidence            789999999997653            23578999999999999999999987766665555555431  2344444433

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.94  E-value=0.0017  Score=59.16  Aligned_cols=125  Identities=16%  Similarity=0.237  Sum_probs=75.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~~  464 (567)
                      ..+|+.++++.++ .||++.-+|.-   .....+.-|..     .++..  .   -+..+.+  .++.  .+.|+.|...
T Consensus       110 ~~~~~~~~L~~L~-~~~~l~i~Tn~---~~~~~~~~l~~-----~gl~~--~---fd~i~~s--~~~~~~KP~p~~~~~~  173 (247)
T d2gfha1         110 LADDVKAMLTELR-KEVRLLLLTNG---DRQTQREKIEA-----CACQS--Y---FDAIVIG--GEQKEEKPAPSIFYHC  173 (247)
T ss_dssp             CCHHHHHHHHHHH-TTSEEEEEECS---CHHHHHHHHHH-----HTCGG--G---CSEEEEG--GGSSSCTTCHHHHHHH
T ss_pred             cCccHHHHHHHhh-cccceEEeecc---cchhhhhhhhh-----ccccc--c---ccccccc--cccccchhhhhhHHHH
Confidence            4578999999998 58999999984   44555666666     44421  1   1223322  2232  3345677664


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCCCCEEEEcCCCcccccccc---cccccHhhHHhhhhhc
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSRGEVKHEMTQ---TFQSTYSNMSYLVDQM  535 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~---~~~~sY~~l~~~vd~~  535 (567)
                      + +.+.    -.... ..-+|++. +|+.+=+++|+..  ++.+++.++.......   ....++..|.++++.+
T Consensus       174 ~-~~~~----~~~~~-~l~iGD~~~~Di~~A~~~G~~~--~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~i  240 (247)
T d2gfha1         174 C-DLLG----VQPGD-CVMVGDTLETDIQGGLNAGLKA--TVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSI  240 (247)
T ss_dssp             H-HHHT----CCGGG-EEEEESCTTTHHHHHHHTTCSE--EEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHH
T ss_pred             H-HHhh----cCHHh-cceeccChHhHHHHHHHcCCeE--EEEECCCCCCcccccCCCCEEECCHHHHHHHHHHH
Confidence            4 2221    11222 23588874 8999999999984  5667777665433211   1356777888877654

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.0013  Score=58.82  Aligned_cols=105  Identities=9%  Similarity=0.053  Sum_probs=61.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..||+.+++++++++||++..+|..+....   +..+..+.-  ..+.+..+.     .+....  ...++|+.|...+ 
T Consensus       128 ~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~---~~~~~~~~~--~~~~~~~~~-----~~d~~~--~~KP~p~~~~~~~-  194 (253)
T d1zs9a1         128 FFADVVPAVRKWREAGMKVYIYSSGSVEAQ---KLLFGHSTE--GDILELVDG-----HFDTKI--GHKVESESYRKIA-  194 (253)
T ss_dssp             CCTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHTBTT--BCCGGGCSE-----EECGGG--CCTTCHHHHHHHH-
T ss_pred             cCCCHHHHHHHHhhccCceeecCCCcHHHH---HHHHHHcCc--chhhhhcce-----eecccc--ccCCCcHHHHHHH-
Confidence            458999999999999999999999875544   555544211  111111111     111100  1244556666654 


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCc
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE  512 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~  512 (567)
                      +.+ .+ .+ ...+  -+|++.+|+.+=+++|+.   ...|+..|.
T Consensus       195 ~~~-~~-~p-~~~l--~vgD~~~dv~aA~~aG~~---ti~v~r~g~  232 (253)
T d1zs9a1         195 DSI-GC-ST-NNIL--FLTDVTREASAAEEADVH---VAVVVRPGN  232 (253)
T ss_dssp             HHH-TS-CG-GGEE--EEESCHHHHHHHHHTTCE---EEEECCTTC
T ss_pred             HHh-CC-Cc-CcEE--EEeCCHHHHHHHHHcCCE---EEEEeCCCC
Confidence            222 21 11 3333  466779999999999994   455665554

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.80  E-value=0.0015  Score=59.79  Aligned_cols=49  Identities=14%  Similarity=0.151  Sum_probs=32.7

Q ss_pred             HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEE-cCCCcccc
Q psy12533        462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTI-NSRGEVKH  515 (567)
Q Consensus       462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~I-n~~g~~~~  515 (567)
                      |..+++.|...++-.... ..+||+-.||+.+.+.+|..    +.+ |..-+++.
T Consensus       163 K~~a~~~l~~~~gi~~~~-~v~~GD~~ND~~Ml~~~~~~----vav~na~~~lk~  212 (244)
T d1s2oa1         163 KGNATQYLQQHLAMEPSQ-TLVCGDSGNDIGLFETSARG----VIVRNAQPELLH  212 (244)
T ss_dssp             HHHHHHHHHHHTTCCGGG-EEEEECSGGGHHHHTSSSEE----EECTTCCHHHHH
T ss_pred             hhHHHHHHHHhccCChhh-EEEEcCCCCCHHHHhhCCcE----EEeCCCCHHHHH
Confidence            666667766655432233 45799999999999988754    366 56666653

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.79  E-value=0.00072  Score=63.07  Aligned_cols=55  Identities=16%  Similarity=0.277  Sum_probs=45.3

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      |.|+||+||||..++            ...+++++.+++++++|.++++||.++..-.....+.|..
T Consensus         3 k~v~fDlDGTL~~~~------------~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~   57 (253)
T d1yv9a1           3 QGYLIDLDGTIYLGK------------EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLAN   57 (253)
T ss_dssp             CEEEECCBTTTEETT------------EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred             CEEEEcCCCccEeCC------------CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHH
Confidence            789999999998653            1346889999999999999999998877777777776654

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=96.79  E-value=0.00061  Score=60.81  Aligned_cols=98  Identities=19%  Similarity=0.308  Sum_probs=60.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~  464 (567)
                      ..+|+.++.+.++++|+++.-+|+.+...+   +..|+.     .+|-+  =.++.+.+       .....++|+.|...
T Consensus        96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~---~~~l~~-----~gl~~~f~~~~~~~~-------~~~~kp~p~~~~~~  160 (224)
T d2hsza1          96 LYPNVKETLEALKAQGYILAVVTNKPTKHV---QPILTA-----FGIDHLFSEMLGGQS-------LPEIKPHPAPFYYL  160 (224)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHH-----TTCGGGCSEEECTTT-------SSSCTTSSHHHHHH
T ss_pred             hHHHHHHHHHHHhccCCcccccccccHHHH---HHHHHh-----cCchhhccccccccc-------cccccccchhhHHH
Confidence            468999999999999999999999766544   555555     33321  01222221       11224566777654


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEE
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTI  507 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~I  507 (567)
                      + +.+ .+ ++ ..  ..-+|++.+|+.+=+++|++  -|++.
T Consensus       161 ~-~~~-~~-~~-~~--~~~igD~~~Di~~A~~aG~~--~i~v~  195 (224)
T d2hsza1         161 C-GKF-GL-YP-KQ--ILFVGDSQNDIFAAHSAGCA--VVGLT  195 (224)
T ss_dssp             H-HHH-TC-CG-GG--EEEEESSHHHHHHHHHHTCE--EEEES
T ss_pred             H-HHh-hh-hh-hc--cchhcCcHHHHHHHHHcCCe--EEEEe
Confidence            3 222 11 11 22  34578999999999999985  45443

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=96.71  E-value=0.0032  Score=57.86  Aligned_cols=95  Identities=16%  Similarity=0.242  Sum_probs=57.6

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhcc--ChhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEK--KPQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k--~p~~fK~~  464 (567)
                      ..+|+.++++.++++||++--+|+.+....+..-+.+..     ..++.. .+.+++        ++...  .|+.|-.+
T Consensus       100 ~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l-----~~~f~d-~~~~~d--------~~~~~KP~p~~~~~~  165 (257)
T d1swva_         100 PINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL-----QGYKPD-FLVTPD--------DVPAGRPYPWMCYKN  165 (257)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH-----TTCCCS-CCBCGG--------GSSCCTTSSHHHHHH
T ss_pred             cCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhh-----cccccc-cccccc--------cccccccChHHHHHH
Confidence            467888999999999999999999876666444443332     222211 122222        22233  45666555


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      |-+ + .+.|. ..  ..-+|++.+|+.+=+++|+.
T Consensus       166 ~~~-l-~~~p~-~~--~v~VgDs~~Di~aA~~aG~~  196 (257)
T d1swva_         166 AME-L-GVYPM-NH--MIKVGDTVSDMKEGRNAGMW  196 (257)
T ss_dssp             HHH-H-TCCSG-GG--EEEEESSHHHHHHHHHTTSE
T ss_pred             HHH-h-CCCCc-ce--EEEEeCChhhHHHHHHCCCE
Confidence            432 2 22221 12  34678889999999999983

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00045  Score=60.97  Aligned_cols=96  Identities=10%  Similarity=0.100  Sum_probs=55.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchH-HHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhc--cChhHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSR-VTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIE--KKPQEFKI  463 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~-~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~--k~p~~fK~  463 (567)
                      ..+|+.++...++++|+++.-+|........ ..+.-...     .++.+     -.|..+.+  -++..  ++|+.|+.
T Consensus       100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~-----~~~~~-----~fd~i~~s--~~~~~~KP~~~~~~~  167 (225)
T d1zd3a1         100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-----CELKM-----HFDFLIES--CQVGMVKPEPQIYKF  167 (225)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-----HHHHT-----TSSEEEEH--HHHTCCTTCHHHHHH
T ss_pred             CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhh-----cChHh-----hccEEEec--cccccchhHHHHHHH
Confidence            4678889999999999999999976544332 22221111     11110     01222222  12333  34577776


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      .| +.+ .+ ++ ...+  -+|++.+|+.+=+++|+.
T Consensus       168 ~~-~~~-~~-~p-~e~l--~VgD~~~Di~~A~~~G~~  198 (225)
T d1zd3a1         168 LL-DTL-KA-SP-SEVV--FLDDIGANLKPARDLGMV  198 (225)
T ss_dssp             HH-HHH-TC-CG-GGEE--EEESCHHHHHHHHHTTCE
T ss_pred             Hh-hhc-cc-Cc-ccee--EEecCHHHHHHHHHcCCE
Confidence            54 222 21 11 2333  468889999999999996

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.00087  Score=60.05  Aligned_cols=94  Identities=15%  Similarity=0.114  Sum_probs=56.0

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRD  193 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~  193 (567)
                      ||+.++.+.++++||++.-+|+.+....   +..++...=  ..+-+ .++.+.+.       ....++|+.|... ++.
T Consensus        91 pg~~~~l~~L~~~g~~~~i~T~~~~~~~---~~~l~~~~l--~~~F~-~i~~~~~~-------~~~Kp~~~~~~~~-~~~  156 (218)
T d1te2a_          91 PGVREAVALCKEQGLLVGLASASPLHML---EKVLTMFDL--RDSFD-ALASAEKL-------PYSKPHPQVYLDC-AAK  156 (218)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEESSCHHHH---HHHHHHTTC--GGGCS-EEEECTTS-------SCCTTSTHHHHHH-HHH
T ss_pred             chHHHHHHHhhhcccccccccccccccc---ccccccccc--ccccc-cccccccc-------ccchhhHHHHHHH-HHH
Confidence            6888999999999999999999766554   444444111  11111 23333221       1123344556533 343


Q ss_pred             HHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        194 IMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       194 i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      +. + ++  .- ...+|++.+|+.+=+++|+..
T Consensus       157 l~-~-~~--~~-~l~igD~~~di~aA~~~G~~~  184 (218)
T d1te2a_         157 LG-V-DP--LT-CVALEDSVNGMIASKAARMRS  184 (218)
T ss_dssp             HT-S-CG--GG-EEEEESSHHHHHHHHHTTCEE
T ss_pred             cC-C-Cc--hh-cEEEeeCHHHHHHHHHcCCEE
Confidence            32 2 22  22 356888899999999999854

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=96.59  E-value=0.00081  Score=60.25  Aligned_cols=95  Identities=14%  Similarity=0.081  Sum_probs=58.0

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  467 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~  467 (567)
                      .||+.++.+.++++||++.-+|+.+....   +..++.+.=  ..+-+ .++.+.+.       ....++|+.|... ++
T Consensus        90 ~pg~~~~l~~L~~~g~~~~i~T~~~~~~~---~~~l~~~~l--~~~F~-~i~~~~~~-------~~~Kp~~~~~~~~-~~  155 (218)
T d1te2a_          90 LPGVREAVALCKEQGLLVGLASASPLHML---EKVLTMFDL--RDSFD-ALASAEKL-------PYSKPHPQVYLDC-AA  155 (218)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHH---HHHHHHTTC--GGGCS-EEEECTTS-------SCCTTSTHHHHHH-HH
T ss_pred             cchHHHHHHHhhhcccccccccccccccc---ccccccccc--ccccc-cccccccc-------ccchhhHHHHHHH-HH
Confidence            37889999999999999999999866554   444444111  11112 23333221       1123455677644 44


Q ss_pred             HHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        468 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       468 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      .+. + +  ..- ...+|++.+|+.+=+++|+..
T Consensus       156 ~l~-~-~--~~~-~l~igD~~~di~aA~~~G~~~  184 (218)
T d1te2a_         156 KLG-V-D--PLT-CVALEDSVNGMIASKAARMRS  184 (218)
T ss_dssp             HHT-S-C--GGG-EEEEESSHHHHHHHHHTTCEE
T ss_pred             HcC-C-C--chh-cEEEeeCHHHHHHHHHcCCEE
Confidence            332 1 1  122 346889999999999999954

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=96.58  E-value=0.0016  Score=60.76  Aligned_cols=54  Identities=19%  Similarity=0.287  Sum_probs=40.6

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  423 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L  423 (567)
                      =|+|+||+||||-.++          +  +-+++++.+++++++|.++++||.++.--.....+.+
T Consensus         7 ik~vlFDlDGTL~~~~----------~--~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~   60 (261)
T d1vjra_           7 IELFILDMDGTFYLDD----------S--LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKL   60 (261)
T ss_dssp             CCEEEECCBTTTEETT----------E--ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHH
T ss_pred             CCEEEEeCCCeeEECC----------c--cCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence            3789999999998763          1  3468999999999999999999976544333333333

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.55  E-value=0.0011  Score=59.18  Aligned_cols=96  Identities=9%  Similarity=0.127  Sum_probs=57.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCccc-chHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhcc--ChhHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIG-QSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEK--KPQEFKI  463 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~-qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k--~p~~fK~  463 (567)
                      ..+|+.+++..++++|+++.-+|..... +....+..+..     .++.+  .   -|..+++  .++...  .|+.|..
T Consensus        98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~-----~~l~~--~---fd~i~~s--~~~~~~KP~p~~~~~  165 (222)
T d1cr6a1          98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMM-----CELSQ--H---FDFLIES--CQVGMIKPEPQIYNF  165 (222)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHH-----HHHGG--G---CSEEEEH--HHHSCCTTCHHHHHH
T ss_pred             CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHh-----cChHh--h---hceeeeh--hhccCCCCChHHHHH
Confidence            4668999999999999999998876543 34444444443     22211  0   1223322  233333  4567765


Q ss_pred             HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      .+ +.+.  +++ .+-++  +|++.+|+.+=+++|+.
T Consensus       166 ~~-~~~~--v~p-~~~l~--IgD~~~Di~~A~~aG~~  196 (222)
T d1cr6a1         166 LL-DTLK--AKP-NEVVF--LDDFGSNLKPARDMGMV  196 (222)
T ss_dssp             HH-HHHT--SCT-TSEEE--EESSSTTTHHHHHHTCE
T ss_pred             HH-HHhC--CCc-ceEEE--EECCHHHHHHHHHcCCE
Confidence            43 3332  223 23333  57889999999999996

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.54  E-value=0.0013  Score=58.60  Aligned_cols=92  Identities=17%  Similarity=0.179  Sum_probs=55.8

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhcc--ChhHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEK--KPQEFKISC  465 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k--~p~~fK~~~  465 (567)
                      -|||.++.+.++++||++.-+|+++..    ++..|+.     .++-.  .   -+..+.  ..++...  +|+.|+.. 
T Consensus        84 ~pgv~~~L~~L~~~g~~~~v~Sn~~~~----~~~~l~~-----~gl~~--~---f~~i~~--s~~~~~~Kp~~~~~~~~-  146 (204)
T d2go7a1          84 MPGAREVLAWADESGIQQFIYTHKGNN----AFTILKD-----LGVES--Y---FTEILT--SQSGFVRKPSPEAATYL-  146 (204)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCTH----HHHHHHH-----HTCGG--G---EEEEEC--GGGCCCCTTSSHHHHHH-
T ss_pred             cchHHhhhhcccccccchhhhcccchh----hhhhhhh-----ccccc--c---cccccc--cccccccchhHHHHHHH-
Confidence            379999999999999999999997642    2344555     23321  0   011221  1233333  44666443 


Q ss_pred             HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      ++.+. + ++  .. ..-+|++.+|+.+=+++|++.
T Consensus       147 ~~~~~-~-~p--~~-~l~VgD~~~Di~~A~~~G~~~  177 (204)
T d2go7a1         147 LDKYQ-L-NS--DN-TYYIGDRTLDVEFAQNSGIQS  177 (204)
T ss_dssp             HHHHT-C-CG--GG-EEEEESSHHHHHHHHHHTCEE
T ss_pred             HHHhC-C-CC--ce-EEEEeCCHHHHHHHHHcCCeE
Confidence            33332 1 12  22 346788899999999999963

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=96.46  E-value=0.0036  Score=57.54  Aligned_cols=95  Identities=16%  Similarity=0.251  Sum_probs=56.0

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~  189 (567)
                      ..+|+.++.+.++++||++.-+|+.+..+.+..-+-+..     ..++.. .+.+++        ++...+|  +.|-..
T Consensus       100 ~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l-----~~~f~d-~~~~~d--------~~~~~KP~p~~~~~~  165 (257)
T d1swva_         100 PINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL-----QGYKPD-FLVTPD--------DVPAGRPYPWMCYKN  165 (257)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH-----TTCCCS-CCBCGG--------GSSCCTTSSHHHHHH
T ss_pred             cCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhh-----cccccc-cccccc--------cccccccChHHHHHH
Confidence            356888899999999999999999776655444443333     222211 122222        2233344  445444


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      | +.+ .+.|. ..  ..-+|++.+|+.+=+++|+.
T Consensus       166 ~-~~l-~~~p~-~~--~v~VgDs~~Di~aA~~aG~~  196 (257)
T d1swva_         166 A-MEL-GVYPM-NH--MIKVGDTVSDMKEGRNAGMW  196 (257)
T ss_dssp             H-HHH-TCCSG-GG--EEEEESSHHHHHHHHHTTSE
T ss_pred             H-HHh-CCCCc-ce--EEEEeCChhhHHHHHHCCCE
Confidence            4 222 22221 11  45677889999999999973

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=96.41  E-value=0.0027  Score=59.09  Aligned_cols=56  Identities=18%  Similarity=0.291  Sum_probs=42.7

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -|+|+||+||||..++          +  +-+|+++.+++++++|.++++||.++.--.......+..
T Consensus         7 ik~vlFDlDGTL~~~~----------~--~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~   62 (261)
T d1vjra_           7 IELFILDMDGTFYLDD----------S--LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN   62 (261)
T ss_dssp             CCEEEECCBTTTEETT----------E--ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHH
T ss_pred             CCEEEEeCCCeeEECC----------c--cCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence            3689999999998763          1  235889999999999999999997765444444555544

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.37  E-value=0.0015  Score=58.18  Aligned_cols=91  Identities=19%  Similarity=0.203  Sum_probs=53.5

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCL  191 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~L  191 (567)
                      +||.++.+.++++||++.-+|+++..    ++..|+.     .+|-.  .   -+.++.+  .++...+|  +.|... +
T Consensus        85 pgv~~~L~~L~~~g~~~~v~Sn~~~~----~~~~l~~-----~gl~~--~---f~~i~~s--~~~~~~Kp~~~~~~~~-~  147 (204)
T d2go7a1          85 PGAREVLAWADESGIQQFIYTHKGNN----AFTILKD-----LGVES--Y---FTEILTS--QSGFVRKPSPEAATYL-L  147 (204)
T ss_dssp             TTHHHHHHHHHHTTCEEEEECSSCTH----HHHHHHH-----HTCGG--G---EEEEECG--GGCCCCTTSSHHHHHH-H
T ss_pred             chHHhhhhcccccccchhhhcccchh----hhhhhhh-----ccccc--c---ccccccc--ccccccchhHHHHHHH-H
Confidence            69999999999999999999987642    2344555     22211  0   0111111  23334444  334332 2


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      +.+ .+ ++  .. ..-+|++.+|+.+=+++|++.
T Consensus       148 ~~~-~~-~p--~~-~l~VgD~~~Di~~A~~~G~~~  177 (204)
T d2go7a1         148 DKY-QL-NS--DN-TYYIGDRTLDVEFAQNSGIQS  177 (204)
T ss_dssp             HHH-TC-CG--GG-EEEEESSHHHHHHHHHHTCEE
T ss_pred             HHh-CC-CC--ce-EEEEeCCHHHHHHHHHcCCeE
Confidence            332 11 22  22 446678899999999999864

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.30  E-value=0.0035  Score=57.05  Aligned_cols=124  Identities=18%  Similarity=0.257  Sum_probs=72.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISC  190 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~  190 (567)
                      .+|+.++++.++ .||++.-+|.-   ..+..+..|..     .+|.  +.   -+..+.+  -++...||  +-|...+
T Consensus       111 ~~~~~~~L~~L~-~~~~l~i~Tn~---~~~~~~~~l~~-----~gl~--~~---fd~i~~s--~~~~~~KP~p~~~~~~~  174 (247)
T d2gfha1         111 ADDVKAMLTELR-KEVRLLLLTNG---DRQTQREKIEA-----CACQ--SY---FDAIVIG--GEQKEEKPAPSIFYHCC  174 (247)
T ss_dssp             CHHHHHHHHHHH-TTSEEEEEECS---CHHHHHHHHHH-----HTCG--GG---CSEEEEG--GGSSSCTTCHHHHHHHH
T ss_pred             CccHHHHHHHhh-cccceEEeecc---cchhhhhhhhh-----cccc--cc---ccccccc--cccccchhhhhhHHHHH
Confidence            468888999998 58999889984   45556666666     4432  11   1222221  13333444  4455433


Q ss_pred             HHHHHHhCCCCCCCEEEecCCc-ccchhhhhhcCCCCCCEEEEcCCCceeccccc---cccccHHhHHhhhhhc
Q psy12533        191 LRDIMALFPPNTQPFYAGYGNK-VNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQ---TFQSTYSNMSYLVDQM  260 (567)
Q Consensus       191 L~~i~~lf~~~~~pf~agfGNr-~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~---~~~~sY~~l~~~vd~~  260 (567)
                       +.    +.-.... ..-+|++ .+|+.+=+++|+..  ++.+++.++.......   ....++..|.++++.+
T Consensus       175 -~~----~~~~~~~-~l~iGD~~~~Di~~A~~~G~~~--~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~i  240 (247)
T d2gfha1         175 -DL----LGVQPGD-CVMVGDTLETDIQGGLNAGLKA--TVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSI  240 (247)
T ss_dssp             -HH----HTCCGGG-EEEEESCTTTHHHHHHHTTCSE--EEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHH
T ss_pred             -HH----hhcCHHh-cceeccChHhHHHHHHHcCCeE--EEEECCCCCCcccccCCCCEEECCHHHHHHHHHHH
Confidence             22    2211223 3457776 58999999999985  4567776655433211   1346777777777654

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=96.09  E-value=0.003  Score=58.92  Aligned_cols=53  Identities=23%  Similarity=0.340  Sum_probs=39.9

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL  423 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L  423 (567)
                      |.|+||+||||-.+           ..+ -+++.+.++.++++|.+++++|.++..-.+..++.|
T Consensus         3 k~vlFDlDGTL~~~-----------~~~-i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l   55 (253)
T d1wvia_           3 KGYLIDLDGTIYKG-----------KDR-IPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEML   55 (253)
T ss_dssp             CEEEEECBTTTEET-----------TEE-CHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHH
T ss_pred             CEEEEcCcCceEEC-----------CCc-CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence            78999999999765           333 488999999999999999999864443333334433

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.08  E-value=0.0031  Score=58.59  Aligned_cols=56  Identities=25%  Similarity=0.552  Sum_probs=44.2

Q ss_pred             eCCCeEEEEecCCccccCCcccccccccCcCC--cchhHHHHHHHHHHCCceEEEEccC
Q psy12533        355 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSAR  411 (567)
Q Consensus       355 ~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw--~h~Gva~l~~~i~~nGY~iiYLSaR  411 (567)
                      .+..|+++||-||||.+.. -|...+.--.||  -.+||.+..+.++++||+|+-+|--
T Consensus        18 ~~~~Kia~fDrDGtLik~~-~~~~~~~~~~d~~~l~~~v~~~i~~L~~~gy~iiIvTNQ   75 (195)
T d1yj5a1          18 KPQGKVAAFDLDGTLITTR-SGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQ   75 (195)
T ss_dssp             CCCSCEEEECSBTTTEECS-SSCSSCSSTTCCEESCTTHHHHHHHHHHHTCEEEEEEEC
T ss_pred             CCcCcEEEEECCCceEeeC-CCCcCCCChhhceeccCCHHHHHHHHHhCCcEEEEecCc
Confidence            5678999999999997642 233333334567  5899999999999999999999974

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.06  E-value=0.0039  Score=55.24  Aligned_cols=49  Identities=20%  Similarity=0.332  Sum_probs=33.6

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccc
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ  415 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~q  415 (567)
                      +|+|||||||+...-      .-......+-+.+.+++++++| .++.+|||+...
T Consensus         2 Li~~DlDGTL~~~~~------~~~~~~i~~~~~~~l~~l~~~~-~v~i~TGR~~~~   50 (229)
T d1u02a_           2 LIFLDYDGTLVPIIM------NPEESYADAGLLSLISDLKERF-DTYIVTGRSPEE   50 (229)
T ss_dssp             EEEEECBTTTBCCCS------CGGGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHH
T ss_pred             EEEEEecCCCCCCCC------ChhhCCCCHHHHHHHHHHhhCC-CEEEEcCCCHHH
Confidence            689999999985310      0001124567788888888755 588899998543

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=96.02  E-value=0.003  Score=56.06  Aligned_cols=93  Identities=19%  Similarity=0.346  Sum_probs=56.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~  189 (567)
                      ..+|+.++.+.++++|+++.-+|+.+...   .+..|+.     .+|-.  =.++.+.+       ......+|+.|...
T Consensus        96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~---~~~~l~~-----~gl~~~f~~~~~~~~-------~~~~kp~p~~~~~~  160 (224)
T d2hsza1          96 LYPNVKETLEALKAQGYILAVVTNKPTKH---VQPILTA-----FGIDHLFSEMLGGQS-------LPEIKPHPAPFYYL  160 (224)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHH-----TTCGGGCSEEECTTT-------SSSCTTSSHHHHHH
T ss_pred             hHHHHHHHHHHHhccCCcccccccccHHH---HHHHHHh-----cCchhhccccccccc-------cccccccchhhHHH
Confidence            45799999999999999999999976544   3555655     33321  01222221       11123455655543


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      + +. ..+ ++  .- ..-+|++.+|+.+=+++|++
T Consensus       161 ~-~~-~~~-~~--~~-~~~igD~~~Di~~A~~aG~~  190 (224)
T d2hsza1         161 C-GK-FGL-YP--KQ-ILFVGDSQNDIFAAHSAGCA  190 (224)
T ss_dssp             H-HH-HTC-CG--GG-EEEEESSHHHHHHHHHHTCE
T ss_pred             H-HH-hhh-hh--hc-cchhcCcHHHHHHHHHcCCe
Confidence            3 22 121 11  12 44578889999999999985

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=95.99  E-value=0.011  Score=52.43  Aligned_cols=125  Identities=18%  Similarity=0.216  Sum_probs=69.7

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      .++++.++...+++.|+++..+|.-+   ....+..+..   .+..-+-.-++.+.+       -.+-.+.|+.|+..+ 
T Consensus        94 ~~~~~~~~l~~l~~~~~~~~i~tn~~---~~~~~~~~~~---~~~~~~fd~~~~s~~-------~~~~KP~p~~~~~~~-  159 (220)
T d1zrna_          94 PFSEVPDSLRELKRRGLKLAILSNGS---PQSIDAVVSH---AGLRDGFDHLLSVDP-------VQVYKPDNRVYELAE-  159 (220)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHH---TTCGGGCSEEEESGG-------GTCCTTSHHHHHHHH-
T ss_pred             ccchhHHHHHHHHhcCCeEEeecchH---HHHHHHHHhh---ccccccccceeeeee-------eeccccHHHHHHHHH-
Confidence            45788899999999999999999965   3444555554   111111122333221       111233456777655 


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhhHHhhhh
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVD  533 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd  533 (567)
                      +.+ .+-|  ...++  +|++..|+.+=+++|+.   ..-|+..+....+....-.-.-.+|.||.+
T Consensus       160 ~~~-g~~p--~e~l~--VgD~~~Di~~A~~aG~~---~v~v~r~~~~~~~~~~~~d~~i~~l~el~~  218 (220)
T d1zrna_         160 QAL-GLDR--SAILF--VASNAWDATGARYFGFP---TCWINRTGNVFEEMGQTPDWEVTSLRAVVE  218 (220)
T ss_dssp             HHH-TSCG--GGEEE--EESCHHHHHHHHHHTCC---EEEECTTCCCCCSSSCCCSEEESSHHHHHT
T ss_pred             HHh-CCCC--ceEEE--EecChHhHHHHHHcCCE---EEEEcCCCCCcccccCCCCEEECCHHHHHh
Confidence            333 2222  23333  56778999999999997   334565555444432211111256666664

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.98  E-value=0.015  Score=52.21  Aligned_cols=123  Identities=14%  Similarity=0.166  Sum_probs=76.3

Q ss_pred             CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533        358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  437 (567)
Q Consensus       358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP  437 (567)
                      +.+++||.+||+|-+          +-|+.++++.+....+++.|.++..+|+-...-+..+..-+.-+.++...  ...
T Consensus         2 ~~~~~~d~~~~~~~~----------~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v--~~~   69 (168)
T d1wpga2           2 TSVICSDKTGTLTTN----------QLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV--ADR   69 (168)
T ss_dssp             CCEEEECCTTTTBCC----------CECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCC--TTT
T ss_pred             eEEEEECCccEEEEE----------ecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccc--ccc
Confidence            568999999999977          23899999999999999999999999998766665554433211111100  011


Q ss_pred             eecCCCchhh---------hhh-hhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533        438 MLLNPTSLLN---------AFH-TEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  499 (567)
Q Consensus       438 vl~spd~l~~---------al~-rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  499 (567)
                      .+. . .-+.         .+. -.+..+-..+.|..+.+.++..   ++.  ++.-|+-.+|+.|.+++.|
T Consensus        70 ~~~-~-~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~lv~~l~~~---g~~--Va~vGDG~nD~~AL~~Adv  134 (168)
T d1wpga2          70 AYT-G-REFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY---DEI--TAMTGDGVNDAPALKKAEI  134 (168)
T ss_dssp             EEE-H-HHHHHSCHHHHHHHHHHCCEEESCCHHHHHHHHHHHHHT---TCC--EEEEECSGGGHHHHHHSSE
T ss_pred             ccc-c-cccchhhHHHHhhhhhhhhhhhccchhHHHHHHHHHHhc---ccc--eeEEecCCCCHHHHHhCCE
Confidence            110 0 0000         000 0122222335688888888883   344  4556666789999988644

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.96  E-value=0.0031  Score=56.96  Aligned_cols=122  Identities=11%  Similarity=0.124  Sum_probs=65.4

Q ss_pred             hhHHHHHHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533        389 NGVTRLFTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKP--QEFKI  463 (567)
Q Consensus       389 ~Gva~l~~~i~~nG-Y~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p--~~fK~  463 (567)
                      ||+.++.+.++++| +++..+|+.+..   ..+..|+.     .+|-+  -.+.++-         ++..++|  +.+  
T Consensus        94 ~g~~~~L~~L~~~g~~~~~v~t~~~~~---~~~~~l~~-----~gl~~~fd~i~~~~---------~~~~~k~~p~~~--  154 (228)
T d2hcfa1          94 EGVRELLDALSSRSDVLLGLLTGNFEA---SGRHKLKL-----PGIDHYFPFGAFAD---------DALDRNELPHIA--  154 (228)
T ss_dssp             TTHHHHHHHHHTCTTEEEEEECSSCHH---HHHHHHHT-----TTCSTTCSCEECTT---------TCSSGGGHHHHH--
T ss_pred             CchHHHHhhhhccccccccccCCCcch---hhhhhhhh-----hccccccccccccc---------ccccccchhHHH--
Confidence            68999999999988 788888887543   34555655     33321  1122221         1223334  332  


Q ss_pred             HHHHHHHhhCCCC--CCCEEEecCCCcccHHhHHHcCCCCCCEEEE-cC--CCcccccccccccccHhhHHhhhhh
Q psy12533        464 SCLRDIMALFPPN--TQPFYAGYGNKVNDVWSYQAVGIPLSRIFTI-NS--RGEVKHEMTQTFQSTYSNMSYLVDQ  534 (567)
Q Consensus       464 ~~L~~i~~lf~~~--~~pf~agfGNr~tDv~aY~~vGIp~~rIF~I-n~--~g~~~~~~~~~~~~sY~~l~~~vd~  534 (567)
                        +..++.+...+  ... ...+|++.+|+.+=+++|+..  |.+- +.  ..++.........++...|.++++.
T Consensus       155 --~~~~~~~~~~~~~p~~-~l~VGD~~~Di~aA~~aG~~~--i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~  225 (228)
T d2hcfa1         155 --LERARRMTGANYSPSQ-IVIIGDTEHDIRCARELDARS--IAVATGNFTMEELARHKPGTLFKNFAETDEVLAS  225 (228)
T ss_dssp             --HHHHHHHHCCCCCGGG-EEEEESSHHHHHHHHTTTCEE--EEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHH
T ss_pred             --HHHhhhhcccCCChhH-heeecCChHHHHHHHHcCCEE--EEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHH
Confidence              22333322111  112 346889999999999999863  3221 11  1122222222345666677666654

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.94  E-value=0.0044  Score=54.70  Aligned_cols=91  Identities=19%  Similarity=0.244  Sum_probs=56.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEFKIS  464 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~--p~~fK~~  464 (567)
                      ..+|+.++++.++++|+++..+|+++...    .+.|+.     +++-.  .   .+..+.+  .++..++  |+.|+..
T Consensus        80 ~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~----~~~l~~-----~~l~~--~---fd~i~~~--~~~~~~KP~p~~~~~~  143 (187)
T d2fi1a1          80 LFEGVSDLLEDISNQGGRHFLVSHRNDQV----LEILEK-----TSIAA--Y---FTEVVTS--SSGFKRKPNPESMLYL  143 (187)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCTHH----HHHHHH-----TTCGG--G---EEEEECG--GGCCCCTTSCHHHHHH
T ss_pred             ccchhHHHHHHHHhhhccccccccCccch----hhhhhh-----hcccc--c---ccccccc--ccccccCCCHHHHHHH
Confidence            34799999999999999999999876432    334555     22210  0   1112211  1223344  5666543


Q ss_pred             HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                       ++.    +..  .+ ..-+|++.+|+.+=+++|+..
T Consensus       144 -~~~----~~~--~~-~l~vgDs~~Di~aA~~aG~~~  172 (187)
T d2fi1a1         144 -REK----YQI--SS-GLVIGDRPIDIEAGQAAGLDT  172 (187)
T ss_dssp             -HHH----TTC--SS-EEEEESSHHHHHHHHHTTCEE
T ss_pred             -HHH----cCC--CC-eEEEeCCHHHHHHHHHcCCEE
Confidence             332    222  24 345899999999999999974

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.0025  Score=56.55  Aligned_cols=41  Identities=17%  Similarity=0.298  Sum_probs=30.2

Q ss_pred             EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCc
Q psy12533        360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARA  412 (567)
Q Consensus       360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRp  412 (567)
                      +++||+||||+.++.  +         ..+...+.+++++++|..++ +|+|.
T Consensus         3 i~lFDlDGTLl~~~~--~---------is~~~~~~i~~l~~~g~~~i-~tgrr   43 (244)
T d2fuea1           3 LCLFDVDGTLTPARQ--K---------IDPEVAAFLQKLRSRVQIGV-VGGSD   43 (244)
T ss_dssp             EEEEESBTTTBSTTS--C---------CCHHHHHHHHHHTTTSEEEE-ECSSC
T ss_pred             EEEEccccCccCCCC--c---------CCHHHHHHHHHHHhCCCEEE-EecCC
Confidence            466899999998751  1         23457889999999997555 66664

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.014  Score=51.80  Aligned_cols=105  Identities=9%  Similarity=0.111  Sum_probs=59.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  191 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L  191 (567)
                      ..||+.+++++++++||++..+|..+..   ..+..+....-  ..+.+..     ...+....  ....+|+.|...+ 
T Consensus       128 ~~pg~~e~l~~L~~~g~~l~i~Tn~~~~---~~~~~~~~~~~--~~~~~~~-----~~~~d~~~--~~KP~p~~~~~~~-  194 (253)
T d1zs9a1         128 FFADVVPAVRKWREAGMKVYIYSSGSVE---AQKLLFGHSTE--GDILELV-----DGHFDTKI--GHKVESESYRKIA-  194 (253)
T ss_dssp             CCTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHTBTT--BCCGGGC-----SEEECGGG--CCTTCHHHHHHHH-
T ss_pred             cCCCHHHHHHHHhhccCceeecCCCcHH---HHHHHHHHcCc--chhhhhc-----ceeecccc--ccCCCcHHHHHHH-
Confidence            4579999999999999999999997654   44555554111  1111111     11111110  1234444455554 


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCc
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE  237 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~  237 (567)
                      +.+ .+ .+ ..-++  +|++..|+.+=+++|+.   ...|+..|.
T Consensus       195 ~~~-~~-~p-~~~l~--vgD~~~dv~aA~~aG~~---ti~v~r~g~  232 (253)
T d1zs9a1         195 DSI-GC-ST-NNILF--LTDVTREASAAEEADVH---VAVVVRPGN  232 (253)
T ss_dssp             HHH-TS-CG-GGEEE--EESCHHHHHHHHHTTCE---EEEECCTTC
T ss_pred             HHh-CC-Cc-CcEEE--EeCCHHHHHHHHHcCCE---EEEEeCCCC
Confidence            222 22 12 23334  55668999999999994   445555443

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=95.82  E-value=0.0067  Score=54.12  Aligned_cols=94  Identities=14%  Similarity=0.237  Sum_probs=54.1

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..||+.+++..++++|+++.-+|++..  +   ...|....-. ..++   .+.+.+...      ...++|+.|...+ 
T Consensus        92 ~~~g~~~~l~~l~~~~~~i~i~s~~~~--~---~~~l~~~~l~-~~f~---~i~~~~~~~------~~KP~~~~~~~~l-  155 (221)
T d1o08a_          92 VYPGILQLLKDLRSNKIKIALASASKN--G---PFLLERMNLT-GYFD---AIADPAEVA------ASKPAPDIFIAAA-  155 (221)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCTT--H---HHHHHHTTCG-GGCS---EECCTTTSS------SCTTSTHHHHHHH-
T ss_pred             ccCCceeccccccccccceEEEeecch--h---hHHHHhhccc-cccc---ccccccccc------ccccChHHHHHHH-
Confidence            456888999999999999999998743  2   3334431111 1122   122222111      1233456665532 


Q ss_pred             HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533        467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  501 (567)
Q Consensus       467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  501 (567)
                      +.+. + .+ .+.  .-+|++..|+.+=+++|+..
T Consensus       156 ~~~~-i-~~-~~~--l~VgD~~~di~~A~~aG~~~  185 (221)
T d1o08a_         156 HAVG-V-AP-SES--IGLEDSQAGIQAIKDSGALP  185 (221)
T ss_dssp             HHTT-C-CG-GGE--EEEESSHHHHHHHHHHTCEE
T ss_pred             HHcC-C-CC-ceE--EEEecCHHHHHHHHHcCCEE
Confidence            2221 1 11 233  35889999999999999964

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.82  E-value=0.0046  Score=57.35  Aligned_cols=55  Identities=25%  Similarity=0.553  Sum_probs=42.7

Q ss_pred             cCCCcEEEEecCCccccCCccccccccccccc--cchhHHHHHHHHHHCCceEEEEcc
Q psy12533         80 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSA  135 (567)
Q Consensus        80 ~~~~kiVISDIDGTITkSD~lG~il~~lGkDw--th~GVa~Ly~~i~~nGY~ilYLSa  135 (567)
                      .+..|+++||.||||.+.. -|...+.--.||  -.+||.+..+.++++||.|+-+|-
T Consensus        18 ~~~~Kia~fDrDGtLik~~-~~~~~~~~~~d~~~l~~~v~~~i~~L~~~gy~iiIvTN   74 (195)
T d1yj5a1          18 KPQGKVAAFDLDGTLITTR-SGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTN   74 (195)
T ss_dssp             CCCSCEEEECSBTTTEECS-SSCSSCSSTTCCEESCTTHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCcCcEEEEECCCceEeeC-CCCcCCCChhhceeccCCHHHHHHHHHhCCcEEEEecC
Confidence            4567999999999997643 233333333466  479999999999999999999996

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.81  E-value=0.0098  Score=58.20  Aligned_cols=36  Identities=25%  Similarity=0.505  Sum_probs=33.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      -++|+.+|++.++++|++++-+||   |+.......|+.
T Consensus       136 Lr~G~~e~~~~l~~~~i~~~IvSg---G~~~~ie~vl~~  171 (291)
T d2bdua1         136 LKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQ  171 (291)
T ss_dssp             BCBTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHH
Confidence            468999999999999999999999   888888998887

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.79  E-value=0.0033  Score=55.56  Aligned_cols=89  Identities=18%  Similarity=0.223  Sum_probs=54.6

Q ss_pred             hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhHHHHHHH
Q psy12533        114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEFKISCL  191 (567)
Q Consensus       114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~--p~~fKi~~L  191 (567)
                      +||.++.+.++++|+++..+|+++...    .+.|+.+.=  ..+..        ..+.+  .++..++  |+.|+..+ 
T Consensus        82 ~gv~~~l~~l~~~g~~~~i~Sn~~~~~----~~~l~~~~l--~~~fd--------~i~~~--~~~~~~KP~p~~~~~~~-  144 (187)
T d2fi1a1          82 EGVSDLLEDISNQGGRHFLVSHRNDQV----LEILEKTSI--AAYFT--------EVVTS--SSGFKRKPNPESMLYLR-  144 (187)
T ss_dssp             TTHHHHHHHHHHTTCEEEEECSSCTHH----HHHHHHTTC--GGGEE--------EEECG--GGCCCCTTSCHHHHHHH-
T ss_pred             chhHHHHHHHHhhhccccccccCccch----hhhhhhhcc--ccccc--------ccccc--ccccccCCCHHHHHHHH-
Confidence            699999999999999999999876432    334554111  11111        12211  1233344  44454432 


Q ss_pred             HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      +    .+..  .| ..-+|++..|+.+=+++|+.+
T Consensus       145 ~----~~~~--~~-~l~vgDs~~Di~aA~~aG~~~  172 (187)
T d2fi1a1         145 E----KYQI--SS-GLVIGDRPIDIEAGQAAGLDT  172 (187)
T ss_dssp             H----HTTC--SS-EEEEESSHHHHHHHHHTTCEE
T ss_pred             H----HcCC--CC-eEEEeCCHHHHHHHHHcCCEE
Confidence            3    2332  34 456888899999999999874

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.003  Score=55.40  Aligned_cols=96  Identities=11%  Similarity=0.103  Sum_probs=53.2

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchH-HHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSR-VTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKI  188 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~-~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi  188 (567)
                      ..+|+.++...++++|+++.-+|..+..... ..+.-...     .++.+     -.+..+.+  -++...||  +.|+.
T Consensus       100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~-----~~~~~-----~fd~i~~s--~~~~~~KP~~~~~~~  167 (225)
T d1zd3a1         100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-----CELKM-----HFDFLIES--CQVGMVKPEPQIYKF  167 (225)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-----HHHHT-----TSSEEEEH--HHHTCCTTCHHHHHH
T ss_pred             CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhh-----cChHh-----hccEEEec--cccccchhHHHHHHH
Confidence            4568889999999999999999976544332 22221111     11100     01122221  13344445  45666


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .| +.+ .+ ++ ...+  -+|++.+|+.+=+++|+.
T Consensus       168 ~~-~~~-~~-~p-~e~l--~VgD~~~Di~~A~~~G~~  198 (225)
T d1zd3a1         168 LL-DTL-KA-SP-SEVV--FLDDIGANLKPARDLGMV  198 (225)
T ss_dssp             HH-HHH-TC-CG-GGEE--EEESCHHHHHHHHHTTCE
T ss_pred             Hh-hhc-cc-Cc-ccee--EEecCHHHHHHHHHcCCE
Confidence            54 222 22 22 2223  357889999999999985

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=95.76  E-value=0.0051  Score=57.24  Aligned_cols=55  Identities=20%  Similarity=0.319  Sum_probs=43.2

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      |+|+||+||||-.++           .+ -+++.+.+++++++|.++++||.++.--.+..++.|..
T Consensus         3 k~vlFDlDGTL~~~~-----------~~-i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~   57 (253)
T d1wvia_           3 KGYLIDLDGTIYKGK-----------DR-IPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLAT   57 (253)
T ss_dssp             CEEEEECBTTTEETT-----------EE-CHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred             CEEEEcCcCceEECC-----------Cc-CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHh
Confidence            789999999998652           33 37899999999999999999997655555556666643

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.75  E-value=0.0062  Score=54.01  Aligned_cols=96  Identities=11%  Similarity=0.156  Sum_probs=55.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccc-hHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQ-SRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKI  188 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~-a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi  188 (567)
                      ..+|+.++...++++|+++.-+|...... ....+..+..     .++.+  .   -+..+.+  -++...||  +.|..
T Consensus        98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~-----~~l~~--~---fd~i~~s--~~~~~~KP~p~~~~~  165 (222)
T d1cr6a1          98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMM-----CELSQ--H---FDFLIES--CQVGMIKPEPQIYNF  165 (222)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHH-----HHHGG--G---CSEEEEH--HHHSCCTTCHHHHHH
T ss_pred             CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHh-----cChHh--h---hceeeeh--hhccCCCCChHHHHH
Confidence            45588899999999999999888765543 3334444433     22210  0   1222222  23444444  44655


Q ss_pred             HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      +| +.+ . ++++ .-++  +|++..|+.+=+++|+.
T Consensus       166 ~~-~~~-~-v~p~-~~l~--IgD~~~Di~~A~~aG~~  196 (222)
T d1cr6a1         166 LL-DTL-K-AKPN-EVVF--LDDFGSNLKPARDMGMV  196 (222)
T ss_dssp             HH-HHH-T-SCTT-SEEE--EESSSTTTHHHHHHTCE
T ss_pred             HH-HHh-C-CCcc-eEEE--EECCHHHHHHHHHcCCE
Confidence            43 333 2 3332 2233  47789999999999985

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=95.75  E-value=0.006  Score=54.44  Aligned_cols=92  Identities=16%  Similarity=0.192  Sum_probs=52.5

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~  189 (567)
                      ..+||.++...++++|+++.-+|++..  +   ..-|+...-. ..++   .+.+.+        ++...+|  +.|.. 
T Consensus        92 ~~~g~~~~l~~l~~~~~~i~i~s~~~~--~---~~~l~~~~l~-~~f~---~i~~~~--------~~~~~KP~~~~~~~-  153 (221)
T d1o08a_          92 VYPGILQLLKDLRSNKIKIALASASKN--G---PFLLERMNLT-GYFD---AIADPA--------EVAASKPAPDIFIA-  153 (221)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCTT--H---HHHHHHTTCG-GGCS---EECCTT--------TSSSCTTSTHHHHH-
T ss_pred             ccCCceeccccccccccceEEEeecch--h---hHHHHhhccc-cccc---cccccc--------cccccccChHHHHH-
Confidence            455888999999999999999998743  2   2333331111 1122   222222        2223344  33433 


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                          +.+.+.-...- ..-+|++..|+.+=+++|+..
T Consensus       154 ----~l~~~~i~~~~-~l~VgD~~~di~~A~~aG~~~  185 (221)
T d1o08a_         154 ----AAHAVGVAPSE-SIGLEDSQAGIQAIKDSGALP  185 (221)
T ss_dssp             ----HHHHTTCCGGG-EEEEESSHHHHHHHHHHTCEE
T ss_pred             ----HHHHcCCCCce-EEEEecCHHHHHHHHHcCCEE
Confidence                33333211112 335788899999999999964

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.74  E-value=0.0072  Score=53.42  Aligned_cols=48  Identities=21%  Similarity=0.398  Sum_probs=32.6

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG  139 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~  139 (567)
                      +|+|||||||+...-      .-.+....+-+.+..++++++ ..++.+|||+..
T Consensus         2 Li~~DlDGTL~~~~~------~~~~~~i~~~~~~~l~~l~~~-~~v~i~TGR~~~   49 (229)
T d1u02a_           2 LIFLDYDGTLVPIIM------NPEESYADAGLLSLISDLKER-FDTYIVTGRSPE   49 (229)
T ss_dssp             EEEEECBTTTBCCCS------CGGGCCCCHHHHHHHHHHHHH-SEEEEECSSCHH
T ss_pred             EEEEEecCCCCCCCC------ChhhCCCCHHHHHHHHHHhhC-CCEEEEcCCCHH
Confidence            689999999985310      001112445677888888875 458889999853

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.0037  Score=55.35  Aligned_cols=41  Identities=17%  Similarity=0.275  Sum_probs=30.1

Q ss_pred             EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCc
Q psy12533         85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARA  137 (567)
Q Consensus        85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRp  137 (567)
                      +++||+||||+.++.  +         ..+...+..++++++|..+ .+|+|.
T Consensus         3 i~lFDlDGTLl~~~~--~---------is~~~~~~i~~l~~~g~~~-i~tgrr   43 (244)
T d2fuea1           3 LCLFDVDGTLTPARQ--K---------IDPEVAAFLQKLRSRVQIG-VVGGSD   43 (244)
T ss_dssp             EEEEESBTTTBSTTS--C---------CCHHHHHHHHHHTTTSEEE-EECSSC
T ss_pred             EEEEccccCccCCCC--c---------CCHHHHHHHHHHHhCCCEE-EEecCC
Confidence            566899999998752  1         2345788899999999655 567764

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=95.47  E-value=0.0042  Score=55.27  Aligned_cols=93  Identities=15%  Similarity=0.136  Sum_probs=52.6

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL  466 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L  466 (567)
                      ..||+.++...++ ++|++.-+|+.+.   ..++..|+.     +++-.  .   .+..+++-.-....++|+.|+..+ 
T Consensus        83 ~~~g~~~~L~~l~-~~~~~~ivT~~~~---~~~~~~l~~-----~~l~~--~---f~~i~~~~~~~~~KP~p~~~~~~~-  147 (207)
T d2hdoa1          83 LYPGITSLFEQLP-SELRLGIVTSQRR---NELESGMRS-----YPFMM--R---MAVTISADDTPKRKPDPLPLLTAL-  147 (207)
T ss_dssp             ECTTHHHHHHHSC-TTSEEEEECSSCH---HHHHHHHTT-----SGGGG--G---EEEEECGGGSSCCTTSSHHHHHHH-
T ss_pred             cccchhhhhhhhc-ccccccccccccc---ccccccccc-----ccccc--c---ccccccccccccchhhhhhhcccc-
Confidence            4478999999996 4799988998654   445666665     22210  0   111211111111233456555433 


Q ss_pred             HHHHhhCCCC-CCCEEEecCCCcccHHhHHHcCCC
Q psy12533        467 RDIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       467 ~~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      +.    +.-. .+.  ..+|++.+|+.+=+++|+.
T Consensus       148 ~~----~~~~~~~~--l~VgDs~~Di~~a~~aG~~  176 (207)
T d2hdoa1         148 EK----VNVAPQNA--LFIGDSVSDEQTAQAANVD  176 (207)
T ss_dssp             HH----TTCCGGGE--EEEESSHHHHHHHHHHTCE
T ss_pred             cc----eeeeccce--eEecCCHHHHHHHHHcCCe
Confidence            22    2211 233  2468899999999999995

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=95.45  E-value=0.02  Score=50.54  Aligned_cols=106  Identities=20%  Similarity=0.225  Sum_probs=61.9

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533        112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS  189 (567)
Q Consensus       112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~  189 (567)
                      .++++.++...+++.|+++..+|.-+   .+..+..+..   .+..-+-.-++.+.         ++...||  +.|+..
T Consensus        94 ~~~~~~~~l~~l~~~~~~~~i~tn~~---~~~~~~~~~~---~~~~~~fd~~~~s~---------~~~~~KP~p~~~~~~  158 (220)
T d1zrna_          94 PFSEVPDSLRELKRRGLKLAILSNGS---PQSIDAVVSH---AGLRDGFDHLLSVD---------PVQVYKPDNRVYELA  158 (220)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESSC---HHHHHHHHHH---TTCGGGCSEEEESG---------GGTCCTTSHHHHHHH
T ss_pred             ccchhHHHHHHHHhcCCeEEeecchH---HHHHHHHHhh---ccccccccceeeee---------eeeccccHHHHHHHH
Confidence            44588889999999999999999954   4445555554   11111112233332         3334455  456655


Q ss_pred             HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc
Q psy12533        190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE  241 (567)
Q Consensus       190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~  241 (567)
                      + +.+ .+-|  ...++  +|+...|+.+=+++|+..   .-|+..|....+
T Consensus       159 ~-~~~-g~~p--~e~l~--VgD~~~Di~~A~~aG~~~---v~v~r~~~~~~~  201 (220)
T d1zrna_         159 E-QAL-GLDR--SAILF--VASNAWDATGARYFGFPT---CWINRTGNVFEE  201 (220)
T ss_dssp             H-HHH-TSCG--GGEEE--EESCHHHHHHHHHHTCCE---EEECTTCCCCCS
T ss_pred             H-HHh-CCCC--ceEEE--EecChHhHHHHHHcCCEE---EEEcCCCCCccc
Confidence            5 333 2322  23333  456689999999999973   345544444443

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=95.38  E-value=0.014  Score=52.75  Aligned_cols=111  Identities=23%  Similarity=0.296  Sum_probs=65.0

Q ss_pred             CCeEEEEecCCccccCCcccccccccCcCC----cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533        357 NDKIVISDIDGTITKSDVLGHVLPIMGKDW----AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  432 (567)
Q Consensus       357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw----~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~  432 (567)
                      +=|++|+||||++|..-+   ++..=|+-.    .+.|++  .+.++..|..+.-+|+|.....   +.....       
T Consensus         4 ~ik~~i~DvDGVlTDG~v---~~~~dG~e~k~F~~~Dg~g--i~~l~~~gi~~~iis~~~~~~v---~~~~~~-------   68 (177)
T d1k1ea_           4 NIKFVITDVDGVLTDGQL---HYDANGEAIKSFHVRDGLG--IKMLMDADIQVAVLSGRDSPIL---RRRIAD-------   68 (177)
T ss_dssp             GCCEEEEECTTTTSCSEE---EEETTEEEEEEEEHHHHHH--HHHHHHTTCEEEEEESCCCHHH---HHHHHH-------
T ss_pred             cCeEEEEccCCcccCCeE---EEeCCCCEEEEEECcchHH--HHHHhhhcEEEEEecCCchhHH---HHHHhh-------
Confidence            347899999999995321   122223322    233443  5668899999999999865443   444444       


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        433 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       433 lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      ++--.++..           +.+      |...++.+..-..-...- ++.+||-.+|..+-+.+|++
T Consensus        69 l~~~~~~~~-----------~~~------K~~~l~~~~~~~~i~~~~-v~~vGDd~nDl~~l~~~g~s  118 (177)
T d1k1ea_          69 LGIKLFFLG-----------KLE------KETACFDLMKQAGVTAEQ-TAYIGDDSVDLPAFAACGTS  118 (177)
T ss_dssp             HTCCEEEES-----------CSC------HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             hcccccccc-----------ccc------HHHHHHHHHHHhcCCcce-eEEecCCccHHHHHhhCCeE
Confidence            111111110           111      444455544422222223 68899999999999999974

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.33  E-value=0.016  Score=56.54  Aligned_cols=108  Identities=19%  Similarity=0.310  Sum_probs=62.3

Q ss_pred             cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC--ceec-----CCCchhhhhhhhhhccChh
Q psy12533        387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG--PMLL-----NPTSLLNAFHTEVIEKKPQ  459 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G--Pvl~-----spd~l~~al~rEvi~k~p~  459 (567)
                      -++|+.++++.++++|++++-+||   |....+...|+.     .+++..  .++.     +.+++...+..+.++.   
T Consensus       136 Lr~G~~e~~~~l~~~~i~~~IvSg---G~~~~ie~vl~~-----lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~---  204 (291)
T d2bdua1         136 LKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQ-----AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHV---  204 (291)
T ss_dssp             BCBTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHHH-----TTCCBTTEEEEEECEEECTTSBEEEECSSCCCT---
T ss_pred             cccCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHH-----cCCCccCceEEeeEEEEeCCeeEeeccCCcccc---
Confidence            478999999999999999999999   777888888877     444421  2332     2334433333333332   


Q ss_pred             HHHHHHH---HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC-CCEEEEcC
Q psy12533        460 EFKISCL---RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL-SRIFTINS  509 (567)
Q Consensus       460 ~fK~~~L---~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~-~rIF~In~  509 (567)
                      ..|-..+   .....+.....+  .-+.|+..+|+.|=.  |++. +.++-|+=
T Consensus       205 ~~K~~~~~~~~~~~~~~~~~~~--vI~iGDs~~Dl~Ma~--g~~~~~~~l~igF  254 (291)
T d2bdua1         205 FNKHDGALKNTDYFSQLKDNSN--IILLGDSQGDLRMAD--GVANVEHILKIGY  254 (291)
T ss_dssp             TCHHHHHHTTHHHHHHTTTCCE--EEEEESSSGGGGTTT--TCSCCSEEEEEEE
T ss_pred             ccCcchhhhhHHHHhccCCcCc--EEEEeCCHhHHHHHh--CCccccceeeeeh
Confidence            1232222   122222222233  346788899986543  4543 44544444

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.18  E-value=0.0055  Score=55.20  Aligned_cols=93  Identities=12%  Similarity=0.102  Sum_probs=52.0

Q ss_pred             hhHHHHHHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533        114 NGVTRLFTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC  190 (567)
Q Consensus       114 ~GVa~Ly~~i~~nG-Y~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~  190 (567)
                      +|+.++.+.++++| +++..+|+.+.   ...+..|+.     .+|-.  -.+.++.         ++..++|.-  ...
T Consensus        94 ~g~~~~L~~L~~~g~~~~~v~t~~~~---~~~~~~l~~-----~gl~~~fd~i~~~~---------~~~~~k~~p--~~~  154 (228)
T d2hcfa1          94 EGVRELLDALSSRSDVLLGLLTGNFE---ASGRHKLKL-----PGIDHYFPFGAFAD---------DALDRNELP--HIA  154 (228)
T ss_dssp             TTHHHHHHHHHTCTTEEEEEECSSCH---HHHHHHHHT-----TTCSTTCSCEECTT---------TCSSGGGHH--HHH
T ss_pred             CchHHHHhhhhccccccccccCCCcc---hhhhhhhhh-----hccccccccccccc---------ccccccchh--HHH
Confidence            58999999999987 78878888644   344566665     33321  1122222         122333321  111


Q ss_pred             HHHHHHhCCCC--CCCEEEecCCcccchhhhhhcCCCC
Q psy12533        191 LRDIMALFPPN--TQPFYAGYGNKVNDVWSYQAVGIPL  226 (567)
Q Consensus       191 L~~i~~lf~~~--~~pf~agfGNr~tDv~aY~~vGIp~  226 (567)
                      +..++.+...+  ..- ...+|++.+|+.+=+++|+..
T Consensus       155 ~~~~~~~~~~~~~p~~-~l~VGD~~~Di~aA~~aG~~~  191 (228)
T d2hcfa1         155 LERARRMTGANYSPSQ-IVIIGDTEHDIRCARELDARS  191 (228)
T ss_dssp             HHHHHHHHCCCCCGGG-EEEEESSHHHHHHHHTTTCEE
T ss_pred             HHHhhhhcccCCChhH-heeecCChHHHHHHHHcCCEE
Confidence            33333332111  112 446788899999999999863

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=94.93  E-value=0.02  Score=51.70  Aligned_cols=111  Identities=23%  Similarity=0.296  Sum_probs=64.4

Q ss_pred             CCcEEEEecCCccccCCccccccccccccc----cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         82 NDKIVISDIDGTITKSDVLGHVLPIMGKDW----AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        82 ~~kiVISDIDGTITkSD~lG~il~~lGkDw----th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      +-|++|+||||++|..-+   ++..=|+-.    .+.|.+  .+.++..|..+.-+|++.....   +.....       
T Consensus         4 ~ik~~i~DvDGVlTDG~v---~~~~dG~e~k~F~~~Dg~g--i~~l~~~gi~~~iis~~~~~~v---~~~~~~-------   68 (177)
T d1k1ea_           4 NIKFVITDVDGVLTDGQL---HYDANGEAIKSFHVRDGLG--IKMLMDADIQVAVLSGRDSPIL---RRRIAD-------   68 (177)
T ss_dssp             GCCEEEEECTTTTSCSEE---EEETTEEEEEEEEHHHHHH--HHHHHHTTCEEEEEESCCCHHH---HHHHHH-------
T ss_pred             cCeEEEEccCCcccCCeE---EEeCCCCEEEEEECcchHH--HHHHhhhcEEEEEecCCchhHH---HHHHhh-------
Confidence            357899999999995321   121112211    233443  5567889999999999866444   444433       


Q ss_pred             CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        158 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       158 LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      ++.-.++..           ...      |...++.++....-...- ++.+||-.+|..+-+.+|++
T Consensus        69 l~~~~~~~~-----------~~~------K~~~l~~~~~~~~i~~~~-v~~vGDd~nDl~~l~~~g~s  118 (177)
T d1k1ea_          69 LGIKLFFLG-----------KLE------KETACFDLMKQAGVTAEQ-TAYIGDDSVDLPAFAACGTS  118 (177)
T ss_dssp             HTCCEEEES-----------CSC------HHHHHHHHHHHHTCCGGG-EEEEECSGGGHHHHHHSSEE
T ss_pred             hcccccccc-----------ccc------HHHHHHHHHHHhcCCcce-eEEecCCccHHHHHhhCCeE
Confidence            111111110           011      555555555433211122 78899999999999999964

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.87  E-value=0.061  Score=48.08  Aligned_cols=123  Identities=13%  Similarity=0.166  Sum_probs=77.0

Q ss_pred             CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533         83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP  162 (567)
Q Consensus        83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP  162 (567)
                      +.+++||.+||+|-+          .-|-.++++.+....+++.|.++..+|+-...-+..+..-+.-+.++...  ...
T Consensus         2 ~~~~~~d~~~~~~~~----------~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v--~~~   69 (168)
T d1wpga2           2 TSVICSDKTGTLTTN----------QLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV--ADR   69 (168)
T ss_dssp             CCEEEECCTTTTBCC----------CECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCC--TTT
T ss_pred             eEEEEECCccEEEEE----------ecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccc--ccc
Confidence            457899999999977          23788999999999999999999999998766665555544322222111  011


Q ss_pred             eecCCCchhhh---------hh-hhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533        163 MLLNPTSLLNA---------FH-TEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI  224 (567)
Q Consensus       163 lllsp~~l~~a---------l~-REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI  224 (567)
                      .+. . .-+..         +. -.+..+-..+.|..+.+.++..   ++  .++.-|+..+|+.|.+++.|
T Consensus        70 ~~~-~-~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~lv~~l~~~---g~--~Va~vGDG~nD~~AL~~Adv  134 (168)
T d1wpga2          70 AYT-G-REFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY---DE--ITAMTGDGVNDAPALKKAEI  134 (168)
T ss_dssp             EEE-H-HHHHHSCHHHHHHHHHHCCEEESCCHHHHHHHHHHHHHT---TC--CEEEEECSGGGHHHHHHSSE
T ss_pred             ccc-c-cccchhhHHHHhhhhhhhhhhhccchhHHHHHHHHHHhc---cc--ceeEEecCCCCHHHHHhCCE
Confidence            110 0 00000         00 0122222334588888888875   23  35666777889988888643

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=94.87  E-value=0.0059  Score=54.26  Aligned_cols=93  Identities=17%  Similarity=0.194  Sum_probs=50.5

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  192 (567)
Q Consensus       113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~  192 (567)
                      .+||.++...++ ++|++.-+|+.+   ...++..|+.     +++-  ..+   +..+.+  -++...+|+   -+++.
T Consensus        84 ~~g~~~~L~~l~-~~~~~~ivT~~~---~~~~~~~l~~-----~~l~--~~f---~~i~~~--~~~~~~KP~---p~~~~  144 (207)
T d2hdoa1          84 YPGITSLFEQLP-SELRLGIVTSQR---RNELESGMRS-----YPFM--MRM---AVTISA--DDTPKRKPD---PLPLL  144 (207)
T ss_dssp             CTTHHHHHHHSC-TTSEEEEECSSC---HHHHHHHHTT-----SGGG--GGE---EEEECG--GGSSCCTTS---SHHHH
T ss_pred             ccchhhhhhhhc-cccccccccccc---cccccccccc-----cccc--ccc---cccccc--cccccchhh---hhhhc
Confidence            368899999986 479998899854   4455666666     2221  000   111111  122233442   22223


Q ss_pred             HHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      .+...+.-...- ...+|++.+|+.+=+++|+.
T Consensus       145 ~~~~~~~~~~~~-~l~VgDs~~Di~~a~~aG~~  176 (207)
T d2hdoa1         145 TALEKVNVAPQN-ALFIGDSVSDEQTAQAANVD  176 (207)
T ss_dssp             HHHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             ccccceeeeccc-eeEecCCHHHHHHHHHcCCe
Confidence            333333211112 23467889999999999995

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.64  E-value=0.08  Score=45.75  Aligned_cols=101  Identities=19%  Similarity=0.205  Sum_probs=71.5

Q ss_pred             eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533        359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  438 (567)
Q Consensus       359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv  438 (567)
                      ..|++|-+|++|..          ..|..|+++.+....+++.|+++.-||+....-+...-.   .     .++..   
T Consensus         4 ~~~~~d~~~~~~~g----------~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~---~-----lgI~~---   62 (135)
T d2b8ea1           4 TAVIFDKTGTLTKG----------KPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISR---E-----LNLDL---   62 (135)
T ss_dssp             CEEEEECCCCCBCS----------CCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH---H-----HTCSE---
T ss_pred             EEEEECCceEEEEe----------cCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHh---h-----hhhhh---
Confidence            46899999999854          479999999999999999999999999976655543322   3     34421   


Q ss_pred             ecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        439 LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       439 l~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                            .+        ..-..+-|.++++.++.    ...  ++..|+..+|+.|-++++|.
T Consensus        63 ------v~--------~~~~p~~k~~~v~~~q~----~~~--v~~vGDg~nD~~aL~~Advg  104 (135)
T d2b8ea1          63 ------VI--------AEVLPHQKSEEVKKLQA----KEV--VAFVGDGINDAPALAQADLG  104 (135)
T ss_dssp             ------EE--------CSCCHHHHHHHHHHHTT----TSC--EEEEECSSSSHHHHHHSSEE
T ss_pred             ------hc--------cccchhHHHHHHHHHHc----CCE--EEEEeCCCCcHHHHHhCCee
Confidence                  11        11223457777777765    233  45667778899998887653

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=94.47  E-value=0.022  Score=51.66  Aligned_cols=51  Identities=20%  Similarity=0.281  Sum_probs=33.3

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS  150 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~  150 (567)
                      .+|++|+||||+.++.             .+-..+-+.+.+++|..++.+|||+...+   +.+++.
T Consensus         4 ~li~~DlDGTL~~~~~-------------~~~~~~~~~~~~~~g~~v~i~TGR~~~~~---~~~~~~   54 (244)
T d1s2oa1           4 LLLISDLDNTWVGDQQ-------------ALEHLQEYLGDRRGNFYLAYATGRSYHSA---RELQKQ   54 (244)
T ss_dssp             EEEEECTBTTTBSCHH-------------HHHHHHHHHHTTGGGEEEEEECSSCHHHH---HHHHHH
T ss_pred             eEEEEECcccCCCCCC-------------CHHHHHHHHHHHcCCCEEEEECCCCHHHH---HHHHHH
Confidence            4788999999986531             00111222334677999999999997655   445544

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.74  E-value=0.035  Score=49.51  Aligned_cols=39  Identities=3%  Similarity=-0.004  Sum_probs=31.6

Q ss_pred             cchhHHHHHHHHHHCC-ceEEEEccCccc---chHHHHHHHHh
Q psy12533        387 AQNGVTRLFTKIKENG-YKLLYLSARAIG---QSRVTREYLQS  425 (567)
Q Consensus       387 ~h~Gva~l~~~i~~nG-Y~iiYLSaRpi~---qa~~Tr~~L~~  425 (567)
                      +-+|+.++++++++.| |.+..+|+|+..   +...++.||+.
T Consensus        75 p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~  117 (195)
T d1q92a_          75 PLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEK  117 (195)
T ss_dssp             BCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHH
Confidence            5689999999999865 578889999743   45678889987

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.50  E-value=0.04  Score=48.36  Aligned_cols=91  Identities=9%  Similarity=0.145  Sum_probs=50.1

Q ss_pred             chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533        388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR  467 (567)
Q Consensus       388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~  467 (567)
                      -+|+.++.+.++.+ |++..+|+-+...+   +..|+.+.-. ..+.  -++.+         .+...++|+.|+     
T Consensus        86 ~~~~~~~l~~l~~~-~~~~i~t~~~~~~~---~~~l~~~gl~-~~fd--~v~~~---------~~~~~~~p~~~~-----  144 (210)
T d2ah5a1          86 FPQIIDLLEELSSS-YPLYITTTKDTSTA---QDMAKNLEIH-HFFD--GIYGS---------SPEAPHKADVIH-----  144 (210)
T ss_dssp             CTTHHHHHHHHHTT-SCEEEEEEEEHHHH---HHHHHHTTCG-GGCS--EEEEE---------CSSCCSHHHHHH-----
T ss_pred             hhHHHHHHhhhhcc-cchhhcccccchhh---hHHHHhhccc-cccc--ccccc---------cccccccccccc-----
Confidence            45777777778766 57788888766554   4445441111 0111  11111         122234454433     


Q ss_pred             HHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533        468 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  500 (567)
Q Consensus       468 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  500 (567)
                      .++..+.-...- ..-+|++.+|+.+-+++|++
T Consensus       145 ~~~~~~~~~~~~-~v~VGDs~~Di~aa~~aGi~  176 (210)
T d2ah5a1         145 QALQTHQLAPEQ-AIIIGDTKFDMLGARETGIQ  176 (210)
T ss_dssp             HHHHHTTCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             hhhhhhhccccc-ceeecCCHHHHHHHHHcCCe
Confidence            333333322223 34689999999999999996

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.17  E-value=0.19  Score=43.30  Aligned_cols=101  Identities=20%  Similarity=0.207  Sum_probs=69.5

Q ss_pred             cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533         84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM  163 (567)
Q Consensus        84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl  163 (567)
                      ..|++|-+|++|..          ..|-.|+++.+..+.+++.|+++.-||+....-+.....   .     .++.    
T Consensus         4 ~~~~~d~~~~~~~g----------~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~---~-----lgI~----   61 (135)
T d2b8ea1           4 TAVIFDKTGTLTKG----------KPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISR---E-----LNLD----   61 (135)
T ss_dssp             CEEEEECCCCCBCS----------CCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH---H-----HTCS----
T ss_pred             EEEEECCceEEEEe----------cCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHh---h-----hhhh----
Confidence            46899999999854          368899999999999999999999999976655443332   2     3332    


Q ss_pred             ecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        164 LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       164 llsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                           ..        ...-..+-|..+++.++.-    .  -++..|+..+|+.|-++++|.
T Consensus        62 -----~v--------~~~~~p~~k~~~v~~~q~~----~--~v~~vGDg~nD~~aL~~Advg  104 (135)
T d2b8ea1          62 -----LV--------IAEVLPHQKSEEVKKLQAK----E--VVAFVGDGINDAPALAQADLG  104 (135)
T ss_dssp             -----EE--------ECSCCHHHHHHHHHHHTTT----S--CEEEEECSSSSHHHHHHSSEE
T ss_pred             -----hh--------ccccchhHHHHHHHHHHcC----C--EEEEEeCCCCcHHHHHhCCee
Confidence                 11        1122224577777666542    2  256667778888888887653

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.44  E-value=0.098  Score=46.46  Aligned_cols=38  Identities=3%  Similarity=-0.007  Sum_probs=30.7

Q ss_pred             chhHHHHHHHHHHCC-ceEEEEccCccc---chHHHHHHHHh
Q psy12533        113 QNGVTRLFTKIKENG-YKLLYLSARAIG---QSRVTREYLQS  150 (567)
Q Consensus       113 h~GVa~Ly~~i~~nG-Y~ilYLSaRpi~---~a~~Tr~~L~~  150 (567)
                      -+|+.++++++++.| +.++.+|+|+..   +...++.||+.
T Consensus        76 ~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~  117 (195)
T d1q92a_          76 LPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEK  117 (195)
T ss_dssp             CTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHH
Confidence            369999999999865 678899999744   45678889988

>d1st9a_ c.47.1.10 (A:) Thiol-disulfide oxidoreductase ResA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione peroxidase-like
domain: Thiol-disulfide oxidoreductase ResA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.64  E-value=0.9  Score=37.50  Aligned_cols=73  Identities=18%  Similarity=0.348  Sum_probs=48.0

Q ss_pred             EEEEecCCc-cccCCccccc-ccccCcCCc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533        360 IVISDIDGT-ITKSDVLGHV-LPIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  431 (567)
Q Consensus       360 iVIsDIDGT-iTkSD~~G~~-~~~~GkDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~  431 (567)
                      .-+-|.||. ++.++..|.. +=.+-..|.      ++.+.+++.++.+.|+.++-+|.-  .-....++|++.     +
T Consensus         8 f~l~~~~G~~~~l~~~~gk~~li~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~i~~~--~~~~~~~~~~~~-----~   80 (137)
T d1st9a_           8 FVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVG--ESKIAVHNFMKS-----Y   80 (137)
T ss_dssp             CEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEES--CCHHHHHHHHHH-----T
T ss_pred             eEEECCCcCEEeHHHhCCCEEEEEEeeccccceeeccccccccccccccccccccccccc--chhhhHHHHHHH-----c
Confidence            356788884 8888888754 212223453      467788999999999999998853  233556777776     5


Q ss_pred             cCCCCceec
Q psy12533        432 TLPEGPMLL  440 (567)
Q Consensus       432 ~lP~GPvl~  440 (567)
                      +++ -|++.
T Consensus        81 ~~~-~~~~~   88 (137)
T d1st9a_          81 GVN-FPVVL   88 (137)
T ss_dssp             TCC-SCEEE
T ss_pred             CCC-ccccc
Confidence            554 34554

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.51  E-value=0.032  Score=48.18  Aligned_cols=49  Identities=12%  Similarity=0.091  Sum_probs=34.9

Q ss_pred             EEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhhHHhhhhhc
Q psy12533        481 YAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQM  535 (567)
Q Consensus       481 ~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~  535 (567)
                      ..+||+-.||+.|.+.+|+..    ..|+.-+++.+..  ...++....|++..+
T Consensus       148 viaiGDg~NDi~Ml~~Ag~gI----Amna~~~v~~~~~--~~~~~~~~~d~~~~~  196 (206)
T d1rkua_         148 VIAAGDSYNDTTMLSEAHAGI----LFHAPENVIREFP--QFPAVHTYEDLKREF  196 (206)
T ss_dssp             EEEEECSSTTHHHHHHSSEEE----EESCCHHHHHHCT--TSCEECSHHHHHHHH
T ss_pred             eEEecCCccCHHHHHhCCccE----EECCCHHHHHhCC--CceeecCHHHHHHHH
Confidence            578999999999999999973    3488777766542  234455666666543

>d1st9a_ c.47.1.10 (A:) Thiol-disulfide oxidoreductase ResA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione peroxidase-like
domain: Thiol-disulfide oxidoreductase ResA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.12  E-value=1.2  Score=36.62  Aligned_cols=73  Identities=18%  Similarity=0.366  Sum_probs=48.1

Q ss_pred             EEEEecCC-ccccCCccccc-cccccccccc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533         85 IVISDIDG-TITKSDVLGHV-LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  156 (567)
Q Consensus        85 iVISDIDG-TITkSD~lG~i-l~~lGkDwth------~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~  156 (567)
                      .-+-|.|| +++.++..|.. +=.+-..|..      +.+.+++.++.+.|+.|+-+|.-  .-.+..++|++.     +
T Consensus         8 f~l~~~~G~~~~l~~~~gk~~li~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~i~~~--~~~~~~~~~~~~-----~   80 (137)
T d1st9a_           8 FVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVG--ESKIAVHNFMKS-----Y   80 (137)
T ss_dssp             CEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEES--CCHHHHHHHHHH-----T
T ss_pred             eEEECCCcCEEeHHHhCCCEEEEEEeeccccceeeccccccccccccccccccccccccc--chhhhHHHHHHH-----c
Confidence            35678998 58888888864 2122234543      47778889999999999988853  233556777776     5


Q ss_pred             cCCCCceec
Q psy12533        157 TLPEGPMLL  165 (567)
Q Consensus       157 ~LP~GPlll  165 (567)
                      +++ -|++.
T Consensus        81 ~~~-~~~~~   88 (137)
T d1st9a_          81 GVN-FPVVL   88 (137)
T ss_dssp             TCC-SCEEE
T ss_pred             CCC-ccccc
Confidence            554 34544

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.37  E-value=0.057  Score=47.17  Aligned_cols=16  Identities=25%  Similarity=0.366  Sum_probs=13.8

Q ss_pred             CcEEEEecCCccccCC
Q psy12533         83 DKIVISDIDGTITKSD   98 (567)
Q Consensus        83 ~kiVISDIDGTITkSD   98 (567)
                      =+.|+|||||||+.++
T Consensus         3 ~~~~lfD~dGTl~d~~   18 (225)
T d2g80a1           3 YSTYLLDIEGTVCPIS   18 (225)
T ss_dssp             CSEEEECCBTTTBCTH
T ss_pred             CCEEEEcCCCCCcccH
Confidence            4689999999999865

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.06  E-value=0.071  Score=46.53  Aligned_cols=28  Identities=14%  Similarity=0.070  Sum_probs=20.4

Q ss_pred             ecCCCcccHHhHHHcCCCCCCEEEEcCCCcc
Q psy12533        483 GYGNKVNDVWSYQAVGIPLSRIFTINSRGEV  513 (567)
Q Consensus       483 gfGNr~tDv~aY~~vGIp~~rIF~In~~g~~  513 (567)
                      -+|++.+|+.+=+++|+..  | .|+..|..
T Consensus       181 ~VgD~~~Dv~~A~~aG~~t--i-~v~r~g~~  208 (225)
T d2g80a1         181 FLSDNPLELDAAAGVGIAT--G-LASRPGNA  208 (225)
T ss_dssp             EEESCHHHHHHHHTTTCEE--E-EECCTTSC
T ss_pred             eecCCHHHHHHHHHcCCEE--E-EEeCCCCC
Confidence            4577899999999999843  4 45655544

>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione peroxidase-like
domain: Soluble secreted antigen MPT53
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.67  E-value=5.6  Score=32.38  Aligned_cols=71  Identities=10%  Similarity=0.222  Sum_probs=41.6

Q ss_pred             EEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533         87 ISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  158 (567)
Q Consensus        87 ISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L  158 (567)
                      .-|+|| +++.++..|.. +-.+...|.-+      -+.+++.+  ..|..++.++.+.  -....++|++.     +++
T Consensus         9 ~~~~~G~~~~l~~~~Gk~vll~F~a~wC~~C~~~~p~l~~~~~~--~~~v~~v~v~~~~--~~~~~~~~~~~-----~~~   79 (134)
T d1lu4a_           9 ATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAA--NPAVTFVGIATRA--DVGAMQSFVSK-----YNL   79 (134)
T ss_dssp             EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHH--CTTSEEEEEECSS--CHHHHHHHHHH-----HTC
T ss_pred             eECCCCCEEcHHHhCCCEEEEEEeecccCCceecchhHHHHhhh--hcccccccccccc--chhhhhhhhhh-----hcc
Confidence            457888 77888888864 22233456544      22233322  2389999998763  24566778777     555


Q ss_pred             CCCceecCC
Q psy12533        159 PEGPMLLNP  167 (567)
Q Consensus       159 P~GPlllsp  167 (567)
                      + -|+++.+
T Consensus        80 ~-~p~~~d~   87 (134)
T d1lu4a_          80 N-FTNLNDA   87 (134)
T ss_dssp             C-SEEEECT
T ss_pred             c-cceeeCc
Confidence            3 4555444

>d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein TlpA, soluble domain {Bradyrhizobium japonicum [TaxId: 375]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione peroxidase-like
domain: Membrane-anchored thioredoxin-like protein TlpA, soluble domain
species: Bradyrhizobium japonicum [TaxId: 375]

Probab=84.01  E-value=1.6  Score=37.55  Aligned_cols=69  Identities=17%  Similarity=0.331  Sum_probs=43.4

Q ss_pred             EEEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533         86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT  157 (567)
Q Consensus        86 VISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~  157 (567)
                      -.=|+|| +++.++..|.. +-.+-..|..+      ...+++..+...+..++.+|.-.. -.+..++|++.     ++
T Consensus        40 ~l~d~~G~~v~L~~~kGK~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~-~~~~~~~~~~~-----~~  113 (176)
T d1jfua_          40 AFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTR-DPEKPKTFLKE-----AN  113 (176)
T ss_dssp             EEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCS-CTTHHHHHHHH-----TT
T ss_pred             EEECCCcCEEeHHHhCCCEEEEEeccCcccchHHHHHhhhhcccccccccccccccccccc-chhhhhhhHhh-----hC
Confidence            3446777 47777777764 22223445443      445677777788999999985432 23556888887     56


Q ss_pred             CCC
Q psy12533        158 LPE  160 (567)
Q Consensus       158 LP~  160 (567)
                      ++.
T Consensus       114 ~~~  116 (176)
T d1jfua_         114 LTR  116 (176)
T ss_dssp             CCT
T ss_pred             Ccc
Confidence            654

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.79  E-value=0.21  Score=42.64  Aligned_cols=49  Identities=12%  Similarity=0.058  Sum_probs=33.0

Q ss_pred             EEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccccccHHhHHhhhhh
Q psy12533        205 FYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQ  259 (567)
Q Consensus       205 f~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~  259 (567)
                      -+.+||+..+|+.|.+.+|+..    ..|+.-+++.+..  ...++....|++..
T Consensus       147 eviaiGDg~NDi~Ml~~Ag~gI----Amna~~~v~~~~~--~~~~~~~~~d~~~~  195 (206)
T d1rkua_         147 RVIAAGDSYNDTTMLSEAHAGI----LFHAPENVIREFP--QFPAVHTYEDLKRE  195 (206)
T ss_dssp             EEEEEECSSTTHHHHHHSSEEE----EESCCHHHHHHCT--TSCEECSHHHHHHH
T ss_pred             ceEEecCCccCHHHHHhCCccE----EECCCHHHHHhCC--CceeecCHHHHHHH
Confidence            3678999999999999999874    3388767766542  22334445555543

>d1xvwa1 c.47.1.10 (A:1-153) Putative peroxiredoxin Rv2238c/MT2298 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione peroxidase-like
domain: Putative peroxiredoxin Rv2238c/MT2298
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.90  E-value=0.81  Score=38.61  Aligned_cols=69  Identities=12%  Similarity=0.168  Sum_probs=46.4

Q ss_pred             EEecCC-ccccCCcccc---ccccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533         87 ISDIDG-TITKSDVLGH---VLPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL  156 (567)
Q Consensus        87 ISDIDG-TITkSD~lG~---il~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~  156 (567)
                      .-|.|| |++.||..|.   ++-....+|+-.      ..++++.+++..|+.++-+|.-+   ....+.|.+.     +
T Consensus        13 l~d~~G~~~slsd~~g~~~vvl~~~~~~~cp~C~~e~~~l~~~~~~~~~~~~~vi~vs~d~---~~~~~~~~~~-----~   84 (153)
T d1xvwa1          13 LRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGP---PPTHKIWATQ-----S   84 (153)
T ss_dssp             EECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCC---HHHHHHHHHH-----H
T ss_pred             EECCCCCEEeHHHHcCCCcEEEEecccccccchhhhhhhhhhhhhhhcccccccccccchh---hhHHHHHhhh-----h
Confidence            447888 7888999885   233344566542      55666777778899999998633   4566788877     5


Q ss_pred             cCCCCcee
Q psy12533        157 TLPEGPML  164 (567)
Q Consensus       157 ~LP~GPll  164 (567)
                      ++| .|++
T Consensus        85 ~~~-~~~l   91 (153)
T d1xvwa1          85 GFT-FPLL   91 (153)
T ss_dssp             TCC-SCEE
T ss_pred             ccc-eeEE
Confidence            665 3444

>d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein TlpA, soluble domain {Bradyrhizobium japonicum [TaxId: 375]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione peroxidase-like
domain: Membrane-anchored thioredoxin-like protein TlpA, soluble domain
species: Bradyrhizobium japonicum [TaxId: 375]

Probab=80.31  E-value=4.4  Score=34.60  Aligned_cols=72  Identities=17%  Similarity=0.297  Sum_probs=42.7

Q ss_pred             EEecCCc-cccCCccccc-ccccCcCCcc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533        362 ISDIDGT-ITKSDVLGHV-LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL  433 (567)
Q Consensus       362 IsDIDGT-iTkSD~~G~~-~~~~GkDw~h------~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l  433 (567)
                      .-|+||. ++.|+..|.. +-..--.|..      +...+++..+.+.+..|+.+|.-.. ..+..++|++.     +++
T Consensus        41 l~d~~G~~v~L~~~kGK~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~-~~~~~~~~~~~-----~~~  114 (176)
T d1jfua_          41 FEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTR-DPEKPKTFLKE-----ANL  114 (176)
T ss_dssp             EECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCS-CTTHHHHHHHH-----TTC
T ss_pred             EECCCcCEEeHHHhCCCEEEEEeccCcccchHHHHHhhhhcccccccccccccccccccc-chhhhhhhHhh-----hCC
Confidence            3466654 6666666653 2112234532      3445677788889999999985432 23456888877     666


Q ss_pred             CCCcee
Q psy12533        434 PEGPML  439 (567)
Q Consensus       434 P~GPvl  439 (567)
                      +.=+++
T Consensus       115 ~~~~~~  120 (176)
T d1jfua_         115 TRLGYF  120 (176)
T ss_dssp             CTTCCE
T ss_pred             cceeee
Confidence            543333

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=80.06  E-value=0.27  Score=42.76  Aligned_cols=89  Identities=9%  Similarity=0.179  Sum_probs=44.9

Q ss_pred             hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHH
Q psy12533        115 GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDI  194 (567)
Q Consensus       115 GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i  194 (567)
                      |+.++.+.++.+ |++..+|+-+...+   +..|+.+.-+. .+.  -++.+.         +....+|+     ++..+
T Consensus        88 ~~~~~l~~l~~~-~~~~i~t~~~~~~~---~~~l~~~gl~~-~fd--~v~~~~---------~~~~~~p~-----~~~~~  146 (210)
T d2ah5a1          88 QIIDLLEELSSS-YPLYITTTKDTSTA---QDMAKNLEIHH-FFD--GIYGSS---------PEAPHKAD-----VIHQA  146 (210)
T ss_dssp             THHHHHHHHHTT-SCEEEEEEEEHHHH---HHHHHHTTCGG-GCS--EEEEEC---------SSCCSHHH-----HHHHH
T ss_pred             HHHHHHhhhhcc-cchhhcccccchhh---hHHHHhhcccc-ccc--cccccc---------cccccccc-----ccchh
Confidence            666667777655 47777777655444   44444411110 011  111111         12223333     33344


Q ss_pred             HHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533        195 MALFPPNTQPFYAGYGNKVNDVWSYQAVGIP  225 (567)
Q Consensus       195 ~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp  225 (567)
                      +..+.-...- ..-+|++.+|+.+-+++|++
T Consensus       147 ~~~~~~~~~~-~v~VGDs~~Di~aa~~aGi~  176 (210)
T d2ah5a1         147 LQTHQLAPEQ-AIIIGDTKFDMLGARETGIQ  176 (210)
T ss_dssp             HHHTTCCGGG-EEEEESSHHHHHHHHHHTCE
T ss_pred             hhhhhccccc-ceeecCCHHHHHHHHHcCCe
Confidence            4444322223 34578888899999999985