Psyllid ID: psy12534

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
MTKRPLGSYLLVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGSWQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYIEGQL
ccccccccEEEEEccccccccccccEEEHHHHcccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccHHHHHHHccccccccEEEEEcccccccccHHHHHHcHHHHHHHHHHcccHHcccccccccccccccccEEEEEEEEEEEEccEEEEccEEEEEccccEEEEccccccccccEEEEEEEEEEcccccccccccEEEEccccccEEEEcccccccccEEEEEccccEEEEEEccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcc
cccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccEEEcccHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHHccccEEEEEEcccEEEEEEEEEEcccccccccccEEEEEEEEEEccccccccccccEEEEcccccEEEEEEcccccccEEEEEcccEEEEEEEccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHc
mtkrplgsyllvwepktydvkfLVPIRVVLVQLSLscelpknhlratgswQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAghemrtlpekmdVETIMNtwtlqtgfpvirvardydagSAVVKQVRGLGFTLIIIVLINTartelkgpftpavgyhyygaqelrrdlttrnrpnfrvtkpshwlraepnltikqedlnaesddwIIFNIQVAtrnrpnfrvtkpfhwlraepnltikqedlnaesddwIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYIEGQL
mtkrplgsyllvwepktydvKFLVPIRVVLVQLSLSCelpknhlratgswqstvLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQElrrdlttrnrpnfrvtkpshwlraepnLTIKQEDLNAESDDWIIFNIQvatrnrpnfrvtkpfhwlraepnLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYIEGQL
MTKRPLGSYLLVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGSWQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYIEGQL
******GSYLLVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGSWQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYI****
***RPLGSYLLVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGSWQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAG*********MDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYIEGQL
MTKRPLGSYLLVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGSWQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYIEGQL
***RPLGSYLLVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGSWQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYIEGQL
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MTKRPLGSYLLVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGSWQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYIEGQL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query343 2.2.26 [Sep-21-2011]
P91887 946 Aminopeptidase N OS=Plute N/A N/A 0.346 0.125 0.451 8e-22
P91885 942 Aminopeptidase N OS=Mandu N/A N/A 0.338 0.123 0.454 2e-21
Q11000 1009 Membrane alanyl aminopept N/A N/A 0.379 0.128 0.385 3e-20
P97449 966 Aminopeptidase N OS=Mus m yes N/A 0.603 0.214 0.272 4e-19
P79098 965 Aminopeptidase N OS=Bos t yes N/A 0.623 0.221 0.282 2e-17
Q11001 990 Membrane alanyl aminopept N/A N/A 0.335 0.116 0.375 8e-17
P15145 963 Aminopeptidase N OS=Sus s yes N/A 0.591 0.210 0.266 1e-16
P15684 965 Aminopeptidase N OS=Rattu yes N/A 0.311 0.110 0.401 3e-16
Q10836 1025 Thyrotropin-releasing hor no N/A 0.900 0.301 0.265 7e-15
P79171 967 Aminopeptidase N OS=Felis N/A N/A 0.591 0.209 0.251 9e-15
>sp|P91887|AMPN_PLUXY Aminopeptidase N OS=Plutella xylostella GN=APN1 PE=1 SV=1 Back     alignment and function desciption
 Score =  104 bits (260), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 74/124 (59%), Gaps = 5/124 (4%)

Query: 221 NFRVTKPFHWLRAEPNLTIKQEDLNA-ESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLR 279
           NF  T+P  WL   P L  +   +   ++ +W I N QQTGYYRV YD +NW  +   L 
Sbjct: 548 NFNDTRPMAWL--PPQLAAEAVQVPGLQNAEWFIVNKQQTGYYRVNYDPENWRALAKVLN 605

Query: 280 NSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYI 339
           +  T+  IHLLNRAQLIDD+ NLAR G LDY +A D++ YL  E + +PW +A  A  Y+
Sbjct: 606 D--THEIIHLLNRAQLIDDSFNLARNGRLDYSLAFDLSRYLVQERDYIPWAAANAAFNYL 663

Query: 340 EGQL 343
              L
Sbjct: 664 NSVL 667

Plutella xylostella (taxid: 51655)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 2
>sp|P91885|AMPN_MANSE Aminopeptidase N OS=Manduca sexta GN=APN2 PE=1 SV=2 Back     alignment and function description
>sp|Q11000|AMPM_HELVI Membrane alanyl aminopeptidase OS=Heliothis virescens PE=1 SV=1 Back     alignment and function description
>sp|P97449|AMPN_MOUSE Aminopeptidase N OS=Mus musculus GN=Anpep PE=1 SV=4 Back     alignment and function description
>sp|P79098|AMPN_BOVIN Aminopeptidase N OS=Bos taurus GN=ANPEP PE=2 SV=4 Back     alignment and function description
>sp|Q11001|AMPM_MANSE Membrane alanyl aminopeptidase (Fragment) OS=Manduca sexta PE=1 SV=1 Back     alignment and function description
>sp|P15145|AMPN_PIG Aminopeptidase N OS=Sus scrofa GN=ANPEP PE=1 SV=4 Back     alignment and function description
>sp|P15684|AMPN_RAT Aminopeptidase N OS=Rattus norvegicus GN=Anpep PE=1 SV=2 Back     alignment and function description
>sp|Q10836|TRHDE_RAT Thyrotropin-releasing hormone-degrading ectoenzyme OS=Rattus norvegicus GN=Trhde PE=1 SV=1 Back     alignment and function description
>sp|P79171|AMPN_FELCA Aminopeptidase N OS=Felis catus GN=ANPEP PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query343
242016965 987 Aminopeptidase N precursor, putative [Pe 0.682 0.237 0.363 2e-42
345482582 982 PREDICTED: aminopeptidase N-like [Nasoni 0.655 0.229 0.373 4e-42
312373191 896 hypothetical protein AND_17802 [Anophele 0.635 0.243 0.380 1e-41
347970422 1071 AGAP013001-PA [Anopheles gambiae str. PE 0.679 0.217 0.373 1e-41
307210584 982 Aminopeptidase N [Harpegnathos saltator] 0.664 0.232 0.373 6e-41
340727898 805 PREDICTED: aminopeptidase N-like [Bombus 0.644 0.274 0.377 1e-40
322779509 984 hypothetical protein SINV_80061 [Solenop 0.670 0.233 0.342 4e-39
427795731 1166 Putative puromycin-sensitive aminopeptid 0.746 0.219 0.359 5e-39
157111305 1006 protease m1 zinc metalloprotease [Aedes 0.670 0.228 0.357 1e-38
307175766 985 Aminopeptidase N [Camponotus floridanus] 0.667 0.232 0.356 6e-38
>gi|242016965|ref|XP_002428965.1| Aminopeptidase N precursor, putative [Pediculus humanus corporis] gi|212513794|gb|EEB16227.1| Aminopeptidase N precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 147/292 (50%), Gaps = 58/292 (19%)

Query: 52  STVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGFPV 111
           + V K GL KY+ +    ++ Q +LW  LT   HE   L +   V+ IM+TWTLQTG+PV
Sbjct: 498 TEVFKKGLTKYLNRHKYSNAEQDDLWTALTEQAHENSVLDKNTTVKMIMDTWTLQTGYPV 557

Query: 112 IRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRRDLT 171
           + V R+YD  +A V Q R L F                                 +   +
Sbjct: 558 VTVKRNYDKKNAQVTQERFLLF---------------------------------KSSKS 584

Query: 172 TRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWL 231
            R++P       S W                    WI       T    NF  TKP  WL
Sbjct: 585 IRDQPEKEEQDSSLW--------------------WIPLTFTNPTE--LNFNSTKPIQWL 622

Query: 232 RAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLN 291
           + E  +T+   D     +DWI+FNIQ+TG+YRV YDEKNW L+I  + +   Y  I ++N
Sbjct: 623 KKEKLITL---DNFPNENDWILFNIQETGFYRVNYDEKNWKLLIDYMNDVNLYENIGIIN 679

Query: 292 RAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYIEGQL 343
           RAQLIDDA+NLA+AGLL+Y+ A++VT YL  E E +PW+SA++A  Y++  L
Sbjct: 680 RAQLIDDALNLAQAGLLNYQTAMNVTRYLSNELEYLPWKSALRAFSYLDNML 731

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|345482582|ref|XP_001608209.2| PREDICTED: aminopeptidase N-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|312373191|gb|EFR20985.1| hypothetical protein AND_17802 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|347970422|ref|XP_003436574.1| AGAP013001-PA [Anopheles gambiae str. PEST] gi|333468926|gb|EGK97116.1| AGAP013001-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|307210584|gb|EFN87052.1| Aminopeptidase N [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340727898|ref|XP_003402271.1| PREDICTED: aminopeptidase N-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|322779509|gb|EFZ09701.1| hypothetical protein SINV_80061 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|427795731|gb|JAA63317.1| Putative puromycin-sensitive aminopeptidase, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|157111305|ref|XP_001651480.1| protease m1 zinc metalloprotease [Aedes aegypti] gi|108878474|gb|EAT42699.1| AAEL005806-PA, partial [Aedes aegypti] Back     alignment and taxonomy information
>gi|307175766|gb|EFN65601.1| Aminopeptidase N [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query343
FB|FBgn0039640 999 CG14516 [Drosophila melanogast 0.393 0.135 0.405 3e-34
FB|FBgn0263236 932 SP1029 "SP1029" [Drosophila me 0.367 0.135 0.413 8e-34
FB|FBgn0051445 927 CG31445 [Drosophila melanogast 0.370 0.137 0.386 2.9e-33
ZFIN|ZDB-GENE-030131-1253 965 anpepb "alanyl (membrane) amin 0.314 0.111 0.433 4.5e-27
FB|FBgn0046253 912 CG3502 [Drosophila melanogaste 0.408 0.153 0.361 2.9e-26
FB|FBgn0051343 961 CG31343 [Drosophila melanogast 0.370 0.132 0.371 3.3e-23
FB|FBgn0030222 911 CG9806 [Drosophila melanogaste 0.390 0.147 0.345 6.1e-23
FB|FBgn0051198 940 CG31198 [Drosophila melanogast 0.405 0.147 0.406 1.6e-22
UNIPROTKB|F1NBR1 767 TRHDE "Uncharacterized protein 0.256 0.114 0.477 7.4e-22
RGD|2991 965 Anpep "alanyl (membrane) amino 0.311 0.110 0.401 3e-21
FB|FBgn0039640 CG14516 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 252 (93.8 bits), Expect = 3.0e-34, Sum P(2) = 3.0e-34
 Identities = 56/138 (40%), Positives = 77/138 (55%)

Query:   203 ESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYY 262
             ES  W I  I   T +  NF  T+P  W+       ++  +L+     W IFN+QQTGYY
Sbjct:   606 ESLLWYI-PITFTTDSELNFANTRPTTWMPRTKLYELENRELSLAK--WFIFNVQQTGYY 662

Query:   263 RVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQY 322
             RV YD +NW  I   L +   +  I   NRAQLIDD MNLAR   L Y+ A+++T YL +
Sbjct:   663 RVNYDLENWMAITEHLMDVDNFEDIAPANRAQLIDDVMNLARGSYLSYETAMNLTRYLGH 722

Query:   323 ETELVPWRSAMQALGYIE 340
             E   VPW++A+    +I+
Sbjct:   723 ELGHVPWKAAISNFIFID 740
GO:0004177 "aminopeptidase activity" evidence=ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
FB|FBgn0263236 SP1029 "SP1029" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0051445 CG31445 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-1253 anpepb "alanyl (membrane) aminopeptidase b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0046253 CG3502 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0051343 CG31343 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0030222 CG9806 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0051198 CG31198 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1NBR1 TRHDE "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|2991 Anpep "alanyl (membrane) aminopeptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query343
pfam11838 323 pfam11838, DUF3358, Domain of unknown function (DU 2e-12
cd09601446 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f 1e-08
>gnl|CDD|221257 pfam11838, DUF3358, Domain of unknown function (DUF3358) Back     alignment and domain information 
 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 251 WIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDY 310
            ++ N    GYYRV YD ++     ATL  +     +  L+RA L  DA  L R G L  
Sbjct: 1   LVLLNDDDLGYYRVRYDPESL----ATLGEALARLKLDPLDRAGLWADAWALVRDGELPT 56

Query: 311 KIALD-VTAYLQYETELVPWRSAMQALGYI 339
           +  LD V A+L  ET+ V     +  LG +
Sbjct: 57  RDFLDLVLAFLPNETDYVVLSEILAQLGTL 86

This domain is functionally uncharacterized. This domain is found in eukaryotes and bacteria. This domain is found to the C-terminus of an aminopeptidase domain. Length = 323
>gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 343
KOG1046|consensus 882 100.0
TIGR02412 831 pepN_strep_liv aminopeptidase N, Streptomyces livi 100.0
COG0308 859 PepN Aminopeptidase N [Amino acid transport and me 99.95
TIGR02414 863 pepN_proteo aminopeptidase N, Escherichia coli typ 99.85
PRK14015 875 pepN aminopeptidase N; Provisional 99.84
PF11838 324 ERAP1_C: ERAP1-like C-terminal domain; InterPro: I 99.76
TIGR02411601 leuko_A4_hydro leukotriene A-4 hydrolase/aminopept 99.52
KOG1047|consensus613 97.39
>KOG1046|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.7e-47  Score=411.28  Aligned_cols=244  Identities=36%  Similarity=0.615  Sum_probs=217.1

Q ss_pred             ccccccccccccCCchhHhhhcccccccCCchhHHHHHHhh-hcHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhcc
Q psy12534          9 YLLVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEM   87 (343)
Q Consensus         9 ~~~~~~pi~~~v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~~   87 (343)
                      -+...|||..+|.++.+|.++||.|+|.||  ++|+|||+. +|+++|++||+.||++|+|+||+++|||++|+...   
T Consensus       390 ~l~~shpi~~~v~~~~ei~e~fd~i~Y~KG--asvlRML~~~lGe~~F~~gi~~yL~~~~y~na~~~DLw~~l~~~~---  464 (882)
T KOG1046|consen  390 ALASSHPISVPVESPSEIDEIFDEISYQKG--ASVLRMLESLLGEEVFRKGLRSYLKKHQYSNAKTEDLWDALEEGS---  464 (882)
T ss_pred             cccccCCeeeecCCcchhhhhhhhhhhhHH--HHHHHHHHHHHCHHHHHHHHHHHHHHhccCCCCchhHHHHHhccC---
Confidence            356899999999999999999999999999  999999997 79999999999999999999999999999999433   


Q ss_pred             CCCCCCCCHHHHHHHhhcCCCCcEEEEEEecCCCeEEEEEeecCCccceeeeccccccccCCCCCCCccccccccchhhh
Q psy12534         88 RTLPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELR  167 (343)
Q Consensus        88 ~~~~~~~~v~~~m~~W~~Q~GyPvV~V~~~~~~~~i~l~Q~rf~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (343)
                           +.+|+++|++|+.|+|||+|+|+++++  .++++|+||        +..+.  .+                    
T Consensus       465 -----~~~v~~~M~~Wt~Q~G~Pvv~V~~~~~--~~~l~Q~rf--------~~~~~--~~--------------------  507 (882)
T KOG1046|consen  465 -----GLDVSELMDTWTKQMGYPVVTVERNGD--SLTLTQERF--------LSDPD--PS--------------------  507 (882)
T ss_pred             -----CCCHHHHHhhhhcCCCCceEEEEecCC--EEEEehhhh--------ccCCC--cc--------------------
Confidence                 799999999999999999999999854  899999999        55332  11                    


Q ss_pred             hccccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCCCCCcccccceEEeecCCcceEEeccCCCC
Q psy12534        168 RDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAE  247 (343)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~~~~~~~~~~~~wl~~~~~~~i~l~~~~~~  247 (343)
                                                        ..++.|+| |++|.+.+.+.+    +..|+..+... +.++    .
T Consensus       508 ----------------------------------~~~~~w~i-Pl~~~~~~~~~~----~~~~~~~~~~~-~~l~----~  543 (882)
T KOG1046|consen  508 ----------------------------------EDNYLWWI-PLTYTTSGSGSV----PKFWLSSKSTT-IKLP----E  543 (882)
T ss_pred             ----------------------------------ccCcccce-eEEEEcCCCCcc----ceeeecCCCcc-eecC----C
Confidence                                              16789999 999998776532    57888877643 4443    2


Q ss_pred             CCCeEEEccCceeEEEEecCHhhHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccCCChh
Q psy12534        248 SDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELV  327 (343)
Q Consensus       248 ~~~wi~~N~~~~GyYRV~YD~~~w~~L~~~L~~~~n~~~i~~~~Ra~Li~D~f~la~ag~l~~~~~L~l~~yL~~E~~~~  327 (343)
                      ..+||++|.++.|||||+||+++|+.|+++|.  . +..++..+|++||+|+|+|+++|+++++.+|+++.||.+|++|.
T Consensus       544 ~~~wi~~N~~~~g~yRV~Yd~~~w~~l~~~l~--~-~~~~~~~~Ra~li~D~~~la~~~~~~~~~~l~l~~~l~~e~~~~  620 (882)
T KOG1046|consen  544 SDQWIKVNLEQTGYYRVNYDDENWALLIEQLK--N-HESLSVIDRAQLINDAFALARAGRLPYSIALNLISYLKNETDYV  620 (882)
T ss_pred             CCeEEEEeCCcceEEEEEeCHHHHHHHHHHHh--h-cCccCHhHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcccccc
Confidence            33799999999999999999999999999997  4 89999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q psy12534        328 PWRSAMQALGYIEG  341 (343)
Q Consensus       328 ~w~~~~~~L~~i~~  341 (343)
                      ||..+...|..+..
T Consensus       621 p~~~~~~~l~~~~~  634 (882)
T KOG1046|consen  621 PWSAAIRSLYKLHS  634 (882)
T ss_pred             hHHHHHHHHHHHhh
Confidence            99999888877653

>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type Back     alignment and domain information
>PRK14015 pepN aminopeptidase N; Provisional Back     alignment and domain information
>PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] Back     alignment and domain information
>TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase Back     alignment and domain information
>KOG1047|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query343
4f5c_A 959 Crystal Structure Of The Spike Receptor Binding Dom 5e-18
4h5h_A 908 Crystal Structure Of Porcine Aminopeptidase-N Compl 6e-18
4hol_A 908 Crystal Structure Of Porcine Aminopeptidase-N Compl 6e-18
4fke_A 909 Crystal Structure Of Porcine Aminopeptidase-N Lengt 6e-18
4fyq_A 903 Human Aminopeptidase N (Cd13) Length = 903 8e-15
3mdj_A 921 Er Aminopeptidase, Erap1, Bound To The Zinc Aminope 2e-09
3qnf_A 954 Crystal Structure Of The Open State Of Human Endopl 2e-09
2yd0_A 897 Crystal Structure Of The Soluble Domain Of Human En 2e-09
3rjo_A 419 Crystal Structure Of Erap1 Peptide Binding Domain L 2e-09
3se6_A 967 Crystal Structure Of The Human Endoplasmic Reticulu 3e-07
4e36_A 967 Crystal Structure Of The Human Endoplasmic Reticulu 3e-07
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 Back     alignment and structure 
Iteration: 1

 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 118/296 (39%), Gaps = 93/296 (31%)
Query: 54  VLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGFPVIR 113
           + K GL  Y+   A  ++T  +LW  L  A     ++     V  IM+ WTLQ GFPVI 
Sbjct: 472 LFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVIT 531
Query: 114 VARDYDAGSAVVKQ---------VRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQ 164
           V  D   G+   K           R   F  + IV I++ +                   
Sbjct: 532 V--DTKTGNISQKHFLLDSESNVTRSSAFDYLWIVPISSIKN------------------ 571
Query: 165 ELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDL-NAESDDWIIFNIQVATRNRPNFR 223
                          V +  +WLR   +++  Q DL    SDDW++ N+ V         
Sbjct: 572 --------------GVMQDHYWLR---DVSQAQNDLFKTASDDWVLLNVNV--------- 605
Query: 224 VTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTT 283
                                              TGY++V YDE NW +I   L+  T 
Sbjct: 606 -----------------------------------TGYFQVNYDEDNWRMIQHQLQ--TN 628
Query: 284 YNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYI 339
            + I ++NRAQ+I D+ NLA A ++   +ALD T +L  E E +PW++A+ +L Y 
Sbjct: 629 LSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYF 684
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 Back     alignment and structure
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 Back     alignment and structure
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 Back     alignment and structure
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 Back     alignment and structure
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 Back     alignment and structure
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 Back     alignment and structure
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 Back     alignment and structure
>pdb|3RJO|A Chain A, Crystal Structure Of Erap1 Peptide Binding Domain Length = 419 Back     alignment and structure
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 Back     alignment and structure
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query343
3se6_A 967 Endoplasmic reticulum aminopeptidase 2; thermolysi 1e-46
2xdt_A 897 Endoplasmic reticulum aminopeptidase 1; glycoprote 1e-43
1z5h_A 780 Tricorn protease interacting factor F3; zinc amino 7e-39
3rjo_A 419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 2e-34
3cia_A605 Cold-active aminopeptidase; psychrohilic, hydrolas 4e-12
3b7s_A616 Leukotriene A-4 hydrolase; transition state, analo 9e-11
2xq0_A632 LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
3ebh_A 889 PFA-M1, M1 family aminopeptidase; hydrolase, metal 1e-05
2gtq_A 867 Aminopeptidase N; alanine aminopeptidase, M1 famil 3e-04
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 Back     alignment and structure
 Score =  168 bits (427), Expect = 1e-46
 Identities = 62/311 (19%), Positives = 103/311 (33%), Gaps = 100/311 (32%)

Query: 53  TVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHE-------------------MRTLPEK 93
              + G+ +Y+KK +  ++   +LW+ L+N+  E                   +  L E 
Sbjct: 472 EKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGEN 531

Query: 94  MDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKG--- 150
            +V+ +M TWTLQ G P++ V +D    S  ++Q R   F   +       R   +    
Sbjct: 532 AEVKEMMTTWTLQKGIPLLVVKQDG--CSLRLQQER---FLQGVFQEDPEWRALQERYLW 586

Query: 151 --PFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWI 208
             P T                 +T +          H L+++ + T+   +       W+
Sbjct: 587 HIPLT----------------YSTSSSNVI----HRHILKSKTD-TLDLPE----KTSWV 621

Query: 209 IFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDE 268
                                                        FN+   GYY V Y+ 
Sbjct: 622 --------------------------------------------KFNVDSNGYYIVHYEG 637

Query: 269 KNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVP 328
             W  +I  L  +  +  +   +R  LI D   L  AG L    ALD+T YLQ+ET    
Sbjct: 638 HGWDQLITQLNQN--HTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPA 695

Query: 329 WRSAMQALGYI 339
               +  L   
Sbjct: 696 LLEGLSYLESF 706
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 Back     alignment and structure
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 Back     alignment and structure
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605 Back     alignment and structure
>3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616 Back     alignment and structure
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889 Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query343
3se6_A 967 Endoplasmic reticulum aminopeptidase 2; thermolysi 100.0
2xdt_A 897 Endoplasmic reticulum aminopeptidase 1; glycoprote 100.0
4fke_A 909 Aminopeptidase N; zinc aminopeptidase, hydrolase; 100.0
1z5h_A 780 Tricorn protease interacting factor F3; zinc amino 100.0
3rjo_A 419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 100.0
2gtq_A 867 Aminopeptidase N; alanine aminopeptidase, M1 famil 99.95
3b34_A 891 Aminopeptidase N; protease, hydrolase, thermolysin 99.92
3ebh_A 889 PFA-M1, M1 family aminopeptidase; hydrolase, metal 99.89
3cia_A605 Cold-active aminopeptidase; psychrohilic, hydrolas 99.78
3u9w_A608 Leukotriene A-4 hydrolase; hydrolase-hydrolase inh 99.67
2xq0_A632 LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B 99.61
4fgm_A597 Aminopeptidase N family protein; structural genomi 96.59
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A* Back     alignment and structure
Probab=100.00  E-value=1.4e-50  Score=439.66  Aligned_cols=261  Identities=26%  Similarity=0.362  Sum_probs=218.3

Q ss_pred             cccccccccccCCchhHhhhcccccccCCchhHHHHHHhh-hcHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhccC
Q psy12534         10 LLVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMR   88 (343)
Q Consensus        10 ~~~~~pi~~~v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~~~   88 (343)
                      +...|||..+|.++.+|.+.||.|+|.||  ++|||||+. +|+++|++||+.||++|+|+|++++|||++|++++++.+
T Consensus       430 ~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KG--a~vL~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~  507 (967)
T 3se6_A          430 LNSSRPISKPAETPTQIQEMFDEVSYNKG--ACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESD  507 (967)
T ss_dssp             STTCCCSSCCCCSHHHHHHTSSHHHHHHH--HHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-----
T ss_pred             ccCCCCceeecCCHHHHHHhcchhhhhHH--HHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhcc
Confidence            34689999999999999999999999999  999999997 899999999999999999999999999999999754321


Q ss_pred             C-------------------CCCCCCHHHHHHHhhcCCCCcEEEEEEecCCCeEEEEEeecCCccceeeeccccccccCC
Q psy12534         89 T-------------------LPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELK  149 (343)
Q Consensus        89 ~-------------------~~~~~~v~~~m~~W~~Q~GyPvV~V~~~~~~~~i~l~Q~rf~~~~~~~~l~~~~~~~~~~  149 (343)
                      .                   ...+.+|++||++|+.|+|||+|+|+++  +++++|+|+||        +.++....+. 
T Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~~q~G~Pvl~V~~~--~~~~~l~Q~rf--------~~~~~~~~~~-  576 (967)
T 3se6_A          508 FTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGIPLLVVKQD--GCSLRLQQERF--------LQGVFQEDPE-  576 (967)
T ss_dssp             --------------------CCCCCCHHHHHHHHHHSCSCEEEEEEEE--TTEEEEEEEEC--------CCC--------
T ss_pred             ccccccccccccccccccccccCCcCHHHHHHHHhcCCCCcEEEEEec--CCEEEEEeeee--------cCCCCCCccc-
Confidence            1                   1347899999999999999999999985  67899999999        6533211000 


Q ss_pred             CCCCCccccccccchhhhhccccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCCCCCcccccceE
Q psy12534        150 GPFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFH  229 (343)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~~~~~~~~~~~~  229 (343)
                              +                                        .....++.|+| ||+|.++.+.    +.+..
T Consensus       577 --------~----------------------------------------~~~~~~~~W~I-Pl~~~~~~~~----~~~~~  603 (967)
T 3se6_A          577 --------W----------------------------------------RALQERYLWHI-PLTYSTSSSN----VIHRH  603 (967)
T ss_dssp             ----------------------------------------------------CCSCCCCC-CEEEEESSCC----CCEEE
T ss_pred             --------c----------------------------------------ccccCCceEEE-EEEEEeCCCC----ccceE
Confidence                    0                                        00014579999 9999886543    23467


Q ss_pred             EeecCCcceEEeccCCCCCCCeEEEccCceeEEEEecCHhhHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHcCCCC
Q psy12534        230 WLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLD  309 (343)
Q Consensus       230 wl~~~~~~~i~l~~~~~~~~~wi~~N~~~~GyYRV~YD~~~w~~L~~~L~~~~n~~~i~~~~Ra~Li~D~f~la~ag~l~  309 (343)
                      ||..++ .++.+    +.+++||++|.++.|||||+||+++|++|+++|.  .|++.|++.+|||||+|+|+|+++|.++
T Consensus       604 ~l~~~~-~~i~~----~~~~~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~--~~~~~i~~~~Ra~li~D~~~la~~g~~~  676 (967)
T 3se6_A          604 ILKSKT-DTLDL----PEKTSWVKFNVDSNGYYIVHYEGHGWDQLITQLN--QNHTLLRPKDRVGLIHDVFQLVGAGRLT  676 (967)
T ss_dssp             CCCSSE-EEEEC----SSCCSCEEESGGGCSSCEEEEETTHHHHHHHHHH--HHGGGSCHHHHHHHHHHHHHHHHTTSSC
T ss_pred             EecCCc-eEEec----cCCCceEEEeCCccEEEEEecCHHHHHHHHHHHh--hccCCCCHHHHHHHHHHHHHHHHcCCCC
Confidence            776543 22333    4567999999999999999999999999999997  6888999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCChhHHHHHHHHHHHHHhcC
Q psy12534        310 YKIALDVTAYLQYETELVPWRSAMQALGYIEGQL  343 (343)
Q Consensus       310 ~~~~L~l~~yL~~E~~~~~w~~~~~~L~~i~~lL  343 (343)
                      ++.+|++++||++|++|+||..++..|.++.+++
T Consensus       677 ~~~~l~l~~~l~~E~~~~~w~~a~~~l~~l~~~~  710 (967)
T 3se6_A          677 LDKALDMTYYLQHETSSPALLEGLSYLESFYHMM  710 (967)
T ss_dssp             HHHHHHHTTGGGTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999987653
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Back     alignment and structure
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Back     alignment and structure
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Back     alignment and structure
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Back     alignment and structure
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Back     alignment and structure
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ... Back     alignment and structure
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Back     alignment and structure
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 343
d3b7sa3252 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase cat 7e-06
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 252 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 7e-06
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 4/65 (6%)

Query: 50  WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGF 109
               +    L+ Y++K +  S T  +   FL +   +       +  +   N W    G 
Sbjct: 190 GGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD----KVDVLNQVDWNAWLYSPGL 245

Query: 110 PVIRV 114
           P I+ 
Sbjct: 246 PPIKP 250

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query343
d3b7sa3252 Leukotriene A4 hydrolase catalytic domain {Human ( 99.65
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.9e-17  Score=150.56  Aligned_cols=94  Identities=20%  Similarity=0.147  Sum_probs=82.5

Q ss_pred             cccccccccCCchh--HhhhcccccccCCchhHHHHHHhh-hc-HHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhcc
Q psy12534         12 VWEPKTYDVKFLVP--IRVVLVQLSLSCELPKNHLRATGS-WQ-STVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEM   87 (343)
Q Consensus        12 ~~~pi~~~v~~~~~--i~~~fd~isy~kg~~~~vlrMl~~-lG-ee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~~   87 (343)
                      ..||+..++..+..  ++..|+.++|.||  ++||+||+. +| ++.|++|||.||++|+|+|++++|||++|+++++  
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~f~~~~Y~Kg--a~vl~mL~~~iG~~~~f~~~lr~yl~~~~~~~~~~~df~~~l~~~~~--  225 (252)
T d3b7sa3         150 ETHPFTKLVVDLTDIDPDVAYSSVPYEKG--FALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFK--  225 (252)
T ss_dssp             TTCGGGSSSCCCTTCCHHHHCSSHHHHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTG--
T ss_pred             ccCCcceeeccccccchhhcccceeecch--hHHHHHHHHHhccHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhc--
Confidence            46888877766544  5678999999999  999999997 77 7899999999999999999999999999999984  


Q ss_pred             CCCCCCCCHHHH----HHHhhcCCCCcEEEEE
Q psy12534         88 RTLPEKMDVETI----MNTWTLQTGFPVIRVA  115 (343)
Q Consensus        88 ~~~~~~~~v~~~----m~~W~~Q~GyPvV~V~  115 (343)
                            .++..+    |++|+.|+|||+|+|+
T Consensus       226 ------~~~~~~~~~~f~~W~~~~G~P~l~v~  251 (252)
T d3b7sa3         226 ------DKVDVLNQVDWNAWLYSPGLPPIKPN  251 (252)
T ss_dssp             ------GGHHHHTTSCHHHHHHCCSSCSSCCC
T ss_pred             ------cccchhhHhHHHHHhcCCCCCeeecc
Confidence                  456666    9999999999999984