Psyllid ID: psy12552

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Protein Sequence
MVDFESGGWWFESKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID
Secondary Structure (PSIPRED)
ccccccccHHHHHHccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccHHHHHHHHHccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHHHHcHHHHHHHHEEcccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHcHHHHHHHccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHcccccEEEcccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccccEcEEEEEEEcccccHHHEEEccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHEEEcccHHHHHHHccHHHccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccHHHcccccccEEEEEcc
Coil and Loop (DISEMBL)
mvdfesggwwfesksvhnstpmpgltpngrRVIIMRASDLDQVLSADAATGMKLVLMIGDirlkeesvgvagdvyvfdaaiatpqnFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLyksipkdvlpeeyggyagdIKTINEQWMKKIESYRDWFKEQETvkadeakrpgkpkthddlfgmegsfkqlsid
Flexible Loop (DISEMBL)
MVDFESGGWWFESksvhnstpmpgltpNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLyksipkdvlpeeYGGYAGDIKTINEQWMKKIESYRDWFKEQEtvkadeakrpgkpkthddlfgmegsfkqlsid
Low Complexity Region (SEG)
MVDFESGGWWFESKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID
Disordered region (IsUnstruct)
*******GWWFE****************GRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFK***********************************
Disordered Region (DISOPRED)
*****SGGWWFESKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRP******DD*FGMEGSFKQLSID
Disordered Region (DISEMBL)
MVDFESGGWWFESKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID
Disordered Region (DISPRO)
*V**ESGGWWFESKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVDFESGGWWFESKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	250	2.2.26 [Sep-21-2011]
Q9D3D0	343	Alpha-tocopherol transfer	yes	N/A	0.34	0.247	0.406	1e-15
Q5RFR0	342	Alpha-tocopherol transfer	yes	N/A	0.34	0.248	0.395	3e-15
Q9BTX7	342	Alpha-tocopherol transfer	yes	N/A	0.34	0.248	0.395	3e-15
P41034	278	Alpha-tocopherol transfer	no	N/A	0.44	0.395	0.333	1e-12
Q8BWP5	278	Alpha-tocopherol transfer	no	N/A	0.44	0.395	0.315	3e-12
P49638	278	Alpha-tocopherol transfer	no	N/A	0.412	0.370	0.330	4e-12
Q8IUQ0	354	Clavesin-1 OS=Homo sapien	no	N/A	0.568	0.401	0.238	1e-10
Q9D4C9	354	Clavesin-1 OS=Mus musculu	no	N/A	0.568	0.401	0.238	1e-10
Q5RCA6	354	Clavesin-1 OS=Pongo abeli	no	N/A	0.568	0.401	0.238	1e-10
A6JFQ6	354	Clavesin-1 OS=Rattus norv	no	N/A	0.568	0.401	0.238	1e-10

>sp|Q9D3D0|TTPAL_MOUSE Alpha-tocopherol transfer protein-like OS=Mus musculus GN=Ttpal PE=2 SV=3

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 114 AKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH-AD 172
           + F P + KK +  +Q+ +P+++K +HI+N   I   I  ++KPF+KEKI NR  +H +D
Sbjct: 199 SHFGPFIAKKVIGILQDGFPIRIKAVHIVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSD 258

Query: 173 MESLYKSIPKDVLPEEYGGYAGDIKT 198
           + SL+ ++P+++LP+EYGG AG++ T
Sbjct: 259 LNSLHTNLPRNILPKEYGGTAGELDT 284

May act as a protein that binds a hydrophobic ligand.
Mus musculus (taxid: 10090)

>sp|Q5RFR0|TTPAL_PONAB Alpha-tocopherol transfer protein-like OS=Pongo abelii GN=TTPAL PE=2 SV=1

 Score = 82.0 bits (201), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 60/86 (69%), Gaps = 1/86 (1%)

Query: 114 AKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH-AD 172
           + F P + KK +  +Q+ +P+++K +H++N   I   I  ++KPF+KEKI NR  +H +D
Sbjct: 198 SHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSD 257

Query: 173 MESLYKSIPKDVLPEEYGGYAGDIKT 198
           + SL+ ++P+ +LP+EYGG AG++ T
Sbjct: 258 LNSLHTNLPRSILPKEYGGTAGELDT 283

May act as a protein that binds a hydrophobic ligand.

Pongo abelii (taxid: 9601)

>sp|Q9BTX7|TTPAL_HUMAN Alpha-tocopherol transfer protein-like OS=Homo sapiens GN=TTPAL PE=2 SV=2

 Score = 82.0 bits (201), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 60/86 (69%), Gaps = 1/86 (1%)

Query: 114 AKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH-AD 172
           + F P + KK +  +Q+ +P+++K +H++N   I   I  ++KPF+KEKI NR  +H +D
Sbjct: 198 SHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSD 257

Query: 173 MESLYKSIPKDVLPEEYGGYAGDIKT 198
           + SL+ ++P+ +LP+EYGG AG++ T
Sbjct: 258 LNSLHTNLPRSILPKEYGGTAGELDT 283

May act as a protein that binds a hydrophobic ligand.

Homo sapiens (taxid: 9606)

>sp|P41034|TTPA_RAT Alpha-tocopherol transfer protein OS=Rattus norvegicus GN=Ttpa PE=1 SV=1

 Score = 73.9 bits (180), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 4/114 (3%)

Query: 111 AHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH 170
           +H  + TP++ KK    V +++P+K++ IH+IN   I   + +++KPF+ EKI+ RI +H
Sbjct: 166 SHAFQITPSVAKKIAAVVTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKGRIHLH 225

Query: 171 AD--MESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKE-QETVK 221
            +    SL +  P D+LP EYGG    ++ I ++W   I    D+     ET++
Sbjct: 226 GNNYKSSLLQHFP-DILPLEYGGNESSMEDICQEWTNFIMKSEDYLSSISETIQ 278

Binds alpha-tocopherol and enhances its transfer between separate membranes.

Rattus norvegicus (taxid: 10116)

>sp|Q8BWP5|TTPA_MOUSE Alpha-tocopherol transfer protein OS=Mus musculus GN=Ttpa PE=2 SV=1

 Score = 72.4 bits (176), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 67/114 (58%), Gaps = 4/114 (3%)

Query: 111 AHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH 170
           +H  + TP++ KK    + +++P+K++ IH+IN   I   + +++KPF+ EKI++RI +H
Sbjct: 166 SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKDRIHLH 225

Query: 171 AD--MESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKE-QETVK 221
            +    S+ +  P D+LP EYGG    ++ I ++W   I    D+     ET++
Sbjct: 226 GNNYKSSMLQHFP-DILPREYGGKEFSMEDICQEWTNFIMKSEDYLSSISETIQ 278

Binds alpha-tocopherol and enhances its transfer between separate membranes.

Mus musculus (taxid: 10090)

>sp|P49638|TTPA_HUMAN Alpha-tocopherol transfer protein OS=Homo sapiens GN=TTPA PE=1 SV=1

 Score = 72.0 bits (175), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 3/106 (2%)

Query: 111 AHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH 170
           +H  + TP++ KK    + +++P+K++ IH+IN   I   + +++KPF+ EKI+ RI +H
Sbjct: 166 SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMH 225

Query: 171 AD--MESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWF 214
            +   +SL +  P D+LP EYGG    ++ I ++W   I    D+ 
Sbjct: 226 GNNYKQSLLQHFP-DILPLEYGGEEFSMEDICQEWTNFIMKSEDYL 270

Binds alpha-tocopherol and enhances its transfer between separate membranes.

Homo sapiens (taxid: 9606)

>sp|Q8IUQ0|CLVS1_HUMAN Clavesin-1 OS=Homo sapiens GN=CLVS1 PE=1 SV=1

 Score = 66.6 bits (161), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 91/176 (51%), Gaps = 34/176 (19%)

Query: 22  MPGLTPN----GRRVIIMRASDLDQVLSADAATG-MKLVLMIGDIRLKEESVGVAGDVYV 76
            PG+  N    GR+++++ A++ DQ  S ++ T  ++ +L+  ++ +++  + + G + +
Sbjct: 126 FPGVLENRDHYGRKILLLFAANWDQ--SRNSFTDILRAILLSLEVLIEDPELQINGFILI 183

Query: 77  FDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKL 136
            D +     NF+   A                     +K TP+++K  +  +Q+++P + 
Sbjct: 184 IDWS-----NFSFKQA---------------------SKLTPSILKLAIEGLQDSFPARF 217

Query: 137 KEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA-DMESLYKSIPKDVLPEEYGG 191
             +H +N    +  +  L+KPF+K+K R RI +H  ++ SL++ I  + LP E+GG
Sbjct: 218 GGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGG 273

Required for normal morphology of late endosomes and/or lysosomes in neurons (By similarity). Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).

Homo sapiens (taxid: 9606)

>sp|Q9D4C9|CLVS1_MOUSE Clavesin-1 OS=Mus musculus GN=Clvs1 PE=2 SV=1

 Score = 66.6 bits (161), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 91/176 (51%), Gaps = 34/176 (19%)

Query: 22  MPGLTPN----GRRVIIMRASDLDQVLSADAATG-MKLVLMIGDIRLKEESVGVAGDVYV 76
            PG+  N    GR+++++ A++ DQ  S ++ T  ++ +L+  ++ +++  + + G + +
Sbjct: 126 FPGVLENRDHYGRKILLLFAANWDQ--SRNSFTDILRAILLSLEVLIEDPELQINGFILI 183

Query: 77  FDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKL 136
            D +     NF+   A                     +K TP+++K  +  +Q+++P + 
Sbjct: 184 IDWS-----NFSFKQA---------------------SKLTPSILKLAIEGLQDSFPARF 217

Query: 137 KEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA-DMESLYKSIPKDVLPEEYGG 191
             +H +N    +  +  L+KPF+K+K R RI +H  ++ SL++ I  + LP E+GG
Sbjct: 218 GGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGG 273

Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).

Mus musculus (taxid: 10090)

>sp|Q5RCA6|CLVS1_PONAB Clavesin-1 OS=Pongo abelii GN=CLVS1 PE=2 SV=1

 Score = 66.6 bits (161), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 91/176 (51%), Gaps = 34/176 (19%)

Query: 22  MPGLTPN----GRRVIIMRASDLDQVLSADAATG-MKLVLMIGDIRLKEESVGVAGDVYV 76
            PG+  N    GR+++++ A++ DQ  S ++ T  ++ +L+  ++ +++  + + G + +
Sbjct: 126 FPGVLENRDHYGRKILLLFAANWDQ--SRNSFTDILRAILLSLEVLIEDPELQINGFILI 183

Query: 77  FDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKL 136
            D +     NF+   A                     +K TP+++K  +  +Q+++P + 
Sbjct: 184 IDWS-----NFSFKQA---------------------SKLTPSILKLAIEGLQDSFPARF 217

Query: 137 KEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA-DMESLYKSIPKDVLPEEYGG 191
             +H +N    +  +  L+KPF+K+K R RI +H  ++ SL++ I  + LP E+GG
Sbjct: 218 GGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGG 273

Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).

Pongo abelii (taxid: 9601)

>sp|A6JFQ6|CLVS1_RAT Clavesin-1 OS=Rattus norvegicus GN=Clvs1 PE=1 SV=1

 Score = 66.6 bits (161), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 91/176 (51%), Gaps = 34/176 (19%)

Query: 22  MPGLTPN----GRRVIIMRASDLDQVLSADAATG-MKLVLMIGDIRLKEESVGVAGDVYV 76
            PG+  N    GR+++++ A++ DQ  S ++ T  ++ +L+  ++ +++  + + G + +
Sbjct: 126 FPGVLENRDHYGRKILLLFAANWDQ--SRNSFTDILRAILLSLEVLIEDPELQINGFILI 183

Query: 77  FDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKL 136
            D +     NF+   A                     +K TP+++K  +  +Q+++P + 
Sbjct: 184 IDWS-----NFSFKQA---------------------SKLTPSILKLAIEGLQDSFPARF 217

Query: 137 KEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA-DMESLYKSIPKDVLPEEYGG 191
             +H +N    +  +  L+KPF+K+K R RI +H  ++ SL++ I  + LP E+GG
Sbjct: 218 GGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGG 273

Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
193713745	310	PREDICTED: alpha-tocopherol transfer pro	0.864	0.696	0.648	5e-85
242009791	307	protein C20orf121, putative [Pediculus h	0.836	0.680	0.613	2e-78
156545860	306	PREDICTED: clavesin-2-like [Nasonia vitr	0.836	0.683	0.605	5e-77
350425535	306	PREDICTED: alpha-tocopherol transfer pro	0.812	0.663	0.608	3e-75
340728956	306	PREDICTED: alpha-tocopherol transfer pro	0.812	0.663	0.608	5e-75
380013618	748	PREDICTED: uncharacterized protein LOC10	0.848	0.283	0.564	4e-74
66499088	306	PREDICTED: alpha-tocopherol transfer pro	0.812	0.663	0.582	8e-74
170047389	308	CRAL/TRIO domain-containing protein [Cul	0.812	0.659	0.578	1e-72
91084815	308	PREDICTED: similar to CRAL/TRIO domain-c	0.832	0.675	0.561	2e-72
312385811	205	hypothetical protein AND_00321 [Anophele	0.812	0.990	0.573	2e-71

>gi|193713745|ref|XP_001946172.1| PREDICTED: alpha-tocopherol transfer protein-like isoform 1 [Acyrthosiphon pisum] gi|328708497|ref|XP_003243707.1| PREDICTED: alpha-tocopherol transfer protein-like isoform 2 [Acyrthosiphon pisum]

 Score =  320 bits (819), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 155/239 (64%), Positives = 184/239 (76%), Gaps = 23/239 (9%)

Query: 12  ESKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVA 71
           E   V N  P+PGLTPNGRRV++M   DL+Q ++A  A GMK+VLMIGDIRLKEE VGVA
Sbjct: 95  EVMRVANVPPLPGLTPNGRRVVMMSGVDLEQ-MAATVAEGMKVVLMIGDIRLKEEHVGVA 153

Query: 72  GDVYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEA 131
           GDVY+ DA++ATPQNFA H                       AKFTP+LIKKFLICVQEA
Sbjct: 154 GDVYILDASVATPQNFANHF----------------------AKFTPSLIKKFLICVQEA 191

Query: 132 YPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGG 191
           YPVKLKE+H+IN S +VDTIIN VKPF+KEKIR RI VH+ ++SL + +P+D+LPEEYGG
Sbjct: 192 YPVKLKEVHVINVSPLVDTIINFVKPFLKEKIRTRIHVHSSLDSLNEFVPRDMLPEEYGG 251

Query: 192 YAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID 250
            AG I  IN QW +K+ +Y+DWFKEQE +KADE++RPGKPKTHDDLFGMEGSFKQLSID
Sbjct: 252 KAGPIADINRQWYEKMVTYKDWFKEQEKIKADESRRPGKPKTHDDLFGMEGSFKQLSID 310

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242009791|ref|XP_002425666.1| protein C20orf121, putative [Pediculus humanus corporis] gi|212509559|gb|EEB12928.1| protein C20orf121, putative [Pediculus humanus corporis]

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 146/238 (61%), Positives = 175/238 (73%), Gaps = 29/238 (12%)

Query: 14  KSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGD 73
           K VH   P+PGLTP GRRVI+MR  D DQ  + + A  MK+V MIGDIRL EE+ GV GD
Sbjct: 98  KQVH-IPPLPGLTPEGRRVIVMRGIDKDQP-TPNVAEAMKIVFMIGDIRLLEETTGVGGD 155

Query: 74  VYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYP 133
           +Y+ DAA+ATP                           H AKFTPTLIKKFL+C QE YP
Sbjct: 156 IYILDAAVATP--------------------------THFAKFTPTLIKKFLVCAQEGYP 189

Query: 134 VKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD-MESLYKSIPKDVLPEEYGGY 192
           VKLKE+H++N S +VDTI+N VKPF+KEKI+NRI  HAD  ESLYK +PK++LPEEYGG+
Sbjct: 190 VKLKEVHVVNVSPLVDTIVNFVKPFLKEKIKNRIFFHADGYESLYKYVPKEILPEEYGGF 249

Query: 193 AGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID 250
           AG I  INEQW+KK+ESY+DWF +QE VKADE+KRPGKPKTHDDLFG+EGSF++L ID
Sbjct: 250 AGPIGAINEQWLKKLESYKDWFIQQEDVKADESKRPGKPKTHDDLFGVEGSFRKLVID 307

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156545860|ref|XP_001607936.1| PREDICTED: clavesin-2-like [Nasonia vitripennis]

 Score =  293 bits (750), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 143/236 (60%), Positives = 174/236 (73%), Gaps = 27/236 (11%)

Query: 15  SVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDV 74
           S+    P+PGLT NGRRV++MR  D D + + + A  MKLVLMIGDIRLKEE +GVAGDV
Sbjct: 98  SIVQVPPLPGLTKNGRRVVVMRGIDKD-MPTPNVAEAMKLVLMIGDIRLKEELIGVAGDV 156

Query: 75  YVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPV 134
           YV DA +ATP                          AH +KFTP L+KKFLICVQEAYPV
Sbjct: 157 YVLDATVATP--------------------------AHFSKFTPALVKKFLICVQEAYPV 190

Query: 135 KLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAG 194
           KLKE+H+IN S +VDTIIN VKPF+KEKIRNRI VH+++E LY+ IP+++LP EYGG AG
Sbjct: 191 KLKEVHVINVSPLVDTIINFVKPFLKEKIRNRIFVHSNLEKLYEYIPREILPTEYGGDAG 250

Query: 195 DIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID 250
            I+ I+E W+KK+E Y  WFKEQE +K +EA RPGKPKTHDDLFG+EGSF+QL+ID
Sbjct: 251 PIQAIHETWIKKLEEYGPWFKEQEAMKTNEALRPGKPKTHDDLFGLEGSFRQLAID 306

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350425535|ref|XP_003494152.1| PREDICTED: alpha-tocopherol transfer protein-like [Bombus impatiens]

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 140/230 (60%), Positives = 172/230 (74%), Gaps = 27/230 (11%)

Query: 21  PMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAA 80
           P+ GLT NGRRVIIMR  D D + + + A  MKLVLMIGD+RLKEE VGVAGDVYV DA+
Sbjct: 104 PLAGLTENGRRVIIMRGIDKD-LPTPNVAEVMKLVLMIGDVRLKEELVGVAGDVYVLDAS 162

Query: 81  IATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIH 140
           +ATP                          AH AKFTP ++KKFL+CVQEAYPVKLKE+H
Sbjct: 163 VATP--------------------------AHFAKFTPAIVKKFLVCVQEAYPVKLKEVH 196

Query: 141 IINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTIN 200
           ++N S +VDTI+N VKPFIKEKIRNRI +H+DM++LY  IP+++LP EYGG AG ++ I+
Sbjct: 197 VVNVSPLVDTIVNFVKPFIKEKIRNRIFMHSDMKTLYDYIPREILPTEYGGDAGPVQAIH 256

Query: 201 EQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID 250
           E W+KK+E Y  WF EQE+VKA+EA RPGKPKTHDDLFG++GSF+QL ID
Sbjct: 257 ETWVKKLEEYGPWFAEQESVKANEALRPGKPKTHDDLFGLDGSFRQLVID 306

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340728956|ref|XP_003402777.1| PREDICTED: alpha-tocopherol transfer protein-like [Bombus terrestris]

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 140/230 (60%), Positives = 172/230 (74%), Gaps = 27/230 (11%)

Query: 21  PMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAA 80
           P+ GLT NGRRVIIMR  D D + + + A  MKLVLMIGD+RLKEE VGVAGDVYV DA+
Sbjct: 104 PLAGLTENGRRVIIMRGIDKD-LPTPNVAEVMKLVLMIGDVRLKEELVGVAGDVYVLDAS 162

Query: 81  IATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIH 140
           +ATP                          AH AKFTP ++KKFL+CVQEAYPVKLKE+H
Sbjct: 163 VATP--------------------------AHFAKFTPAIVKKFLVCVQEAYPVKLKEVH 196

Query: 141 IINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTIN 200
           ++N S +VDTI+N VKPFIKEKIRNRI +H+D+++LY  IP+++LP EYGG AG I+ I+
Sbjct: 197 VVNVSPLVDTIVNFVKPFIKEKIRNRIFMHSDLKTLYDYIPREILPTEYGGDAGPIQAIH 256

Query: 201 EQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID 250
           E W+KK+E Y  WF EQE+VKA+EA RPGKPKTHDDLFG++GSF+QL ID
Sbjct: 257 ETWVKKLEEYGPWFAEQESVKANEALRPGKPKTHDDLFGLDGSFRQLVID 306

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013618|ref|XP_003690849.1| PREDICTED: uncharacterized protein LOC100864938 [Apis florea]

 Score =  283 bits (725), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 135/239 (56%), Positives = 175/239 (73%), Gaps = 27/239 (11%)

Query: 12  ESKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVA 71
           ES  +    P+PGLT NGRRVI+MR  + D + + + A  MKLVLMIGD+RLKEE +GVA
Sbjct: 537 ESLKLCQIPPLPGLTKNGRRVIVMRGINKD-LPTPNVAELMKLVLMIGDVRLKEELMGVA 595

Query: 72  GDVYVFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEA 131
           GDVY+ DA++ATP                          +H AKFTP L+KKFL+CVQEA
Sbjct: 596 GDVYILDASVATP--------------------------SHFAKFTPALVKKFLVCVQEA 629

Query: 132 YPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGG 191
           YPVKLKE+H++N S +VDTI+N VKPF+KEKIRNRI +H+D+ +LY+ IP+++LP EYGG
Sbjct: 630 YPVKLKEVHVVNISPLVDTIVNFVKPFVKEKIRNRIFMHSDLNTLYEYIPREILPAEYGG 689

Query: 192 YAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID 250
            AG ++ I+E W+KK+E Y  WF EQE++K +EA RPGKPKTHDDLFG++GSF+QL ID
Sbjct: 690 DAGPLQNIHETWIKKLEEYGPWFVEQESIKTNEALRPGKPKTHDDLFGLDGSFRQLVID 748

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66499088|ref|XP_624151.1| PREDICTED: alpha-tocopherol transfer protein-like [Apis mellifera]

 Score =  282 bits (722), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 134/230 (58%), Positives = 172/230 (74%), Gaps = 27/230 (11%)

Query: 21  PMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAA 80
           P+PGLT NGRRVI+MR  + D + + + A  MKLVLMIGD+RLKEE +GVAGDVY+ DA+
Sbjct: 104 PLPGLTKNGRRVIVMRGINKD-LPTPNVAELMKLVLMIGDVRLKEELMGVAGDVYILDAS 162

Query: 81  IATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIH 140
           +ATP                          +H AKFTP L+KKFL+CVQEAYPVKLKE+H
Sbjct: 163 VATP--------------------------SHFAKFTPALVKKFLVCVQEAYPVKLKEVH 196

Query: 141 IINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTIN 200
           ++N S +VDTI+N VKPFIKEKIRNRI +H+D+ +LY+ IP+++LP EYGG AG ++ I+
Sbjct: 197 VVNISPLVDTIVNFVKPFIKEKIRNRIFMHSDLNTLYEYIPREILPAEYGGDAGPLQNIH 256

Query: 201 EQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID 250
           E W+KK+E Y  WF EQE++K +EA RPGKPKTHDDLFG++GSF+QL ID
Sbjct: 257 ETWIKKLEEYGPWFVEQESIKTNEALRPGKPKTHDDLFGLDGSFRQLVID 306

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170047389|ref|XP_001851205.1| CRAL/TRIO domain-containing protein [Culex quinquefasciatus] gi|167869862|gb|EDS33245.1| CRAL/TRIO domain-containing protein [Culex quinquefasciatus]

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/230 (57%), Positives = 166/230 (72%), Gaps = 27/230 (11%)

Query: 21  PMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAA 80
           P+PGLTP+G RV+++R +D D + + +    MKL LMIGD+RL EE+VGVAGDVY+ DA+
Sbjct: 106 PLPGLTPSGCRVVMLRGTDKD-ITTPNVIESMKLTLMIGDVRLAEEAVGVAGDVYILDAS 164

Query: 81  IATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIH 140
           +ATP                           H AKFTPTL+KKFLICVQEAYPVKLKE+H
Sbjct: 165 VATP--------------------------THFAKFTPTLVKKFLICVQEAYPVKLKEVH 198

Query: 141 IINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTIN 200
           ++N S IVDTI+N VKPF+KEKIR RI +H+ ME LYK +PKD+LP EYGG AG IK +N
Sbjct: 199 VVNVSPIVDTIVNFVKPFLKEKIRERIHIHSSMEDLYKYVPKDMLPSEYGGAAGSIKDLN 258

Query: 201 EQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID 250
           EQW  K+  Y  WFKEQE  KA+E+ RPG PKT D+LFGM+G+F+QL+ID
Sbjct: 259 EQWRAKLGEYTAWFKEQEASKANESLRPGAPKTADELFGMDGTFRQLTID 308

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91084815|ref|XP_973232.1| PREDICTED: similar to CRAL/TRIO domain-containing protein [Tribolium castaneum] gi|270008959|gb|EFA05407.1| hypothetical protein TcasGA2_TC015583 [Tribolium castaneum]

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 132/235 (56%), Positives = 167/235 (71%), Gaps = 27/235 (11%)

Query: 16  VHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVY 75
           +    P+PGLTP+G+RV IMRA+ L    + + A  MK+ LMIGD+RL  E VGVAGDV+
Sbjct: 101 IAQGPPLPGLTPDGKRVTIMRAT-LKDFETPNIADAMKIALMIGDVRLAAEEVGVAGDVF 159

Query: 76  VFDAAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVK 135
           + DA++A+                            H  K TPT++KKFL+CVQEAYPVK
Sbjct: 160 ILDASVAS--------------------------MNHFTKITPTVVKKFLVCVQEAYPVK 193

Query: 136 LKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGD 195
           LKE+H++NAS IVDTIIN VKPFIKEKIRNRI +H D+ESLYK +PKD+LPEEYGG AG 
Sbjct: 194 LKEVHVVNASAIVDTIINWVKPFIKEKIRNRIHIHQDLESLYKFVPKDILPEEYGGSAGK 253

Query: 196 IKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID 250
           +   N+QWMK +  Y  WFKEQE +KADE+KRPGKP  ++DLFG++GSF+QL+ID
Sbjct: 254 MADFNDQWMKTLAEYTPWFKEQENIKADESKRPGKPTNYEDLFGLDGSFRQLTID 308

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312385811|gb|EFR30220.1| hypothetical protein AND_00321 [Anopheles darlingi]

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 132/230 (57%), Positives = 164/230 (71%), Gaps = 27/230 (11%)

Query: 21  PMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAA 80
           P+PGLTPNG RV+++R +D D + + +    MK  LMIGDIRL EESVGVAGDVYV DA+
Sbjct: 3   PLPGLTPNGCRVVMLRGTDKD-IATPNVVESMKATLMIGDIRLAEESVGVAGDVYVLDAS 61

Query: 81  IATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIH 140
           +ATP                           H AKFTP L+KKFLICVQEAYPVKLKE+H
Sbjct: 62  VATP--------------------------THFAKFTPALVKKFLICVQEAYPVKLKEVH 95

Query: 141 IINASGIVDTIINLVKPFIKEKIRNRIVVHADMESLYKSIPKDVLPEEYGGYAGDIKTIN 200
           +IN S IVDTI+N VKPF+KEKIR RI +H+++E LYK +PK +LP EYGG AG +K +N
Sbjct: 96  VINVSPIVDTIVNFVKPFLKEKIRERIHIHSNIEDLYKYVPKAMLPSEYGGDAGSVKDLN 155

Query: 201 EQWMKKIESYRDWFKEQETVKADEAKRPGKPKTHDDLFGMEGSFKQLSID 250
           +QW  K+  Y  WFKEQE  KA+E+ RPG PKT D+LFGM+G+F+QL+ID
Sbjct: 156 DQWRAKMAEYSGWFKEQEASKANESLRPGAPKTADELFGMDGTFRQLTID 205

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
FB|FBgn0037323	315	CG2663 [Drosophila melanogaste	0.564	0.447	0.638	2.6e-71
FB|FBgn0053514	311	CG33514 [Drosophila melanogast	0.564	0.453	0.408	3.4e-32
FB|FBgn0053966	310	CG33966 [Drosophila melanogast	0.556	0.448	0.392	1.2e-26
FB|FBgn0033437	313	CG12926 [Drosophila melanogast	0.564	0.450	0.375	3.2e-26
FB|FBgn0039107	311	CG10300 [Drosophila melanogast	0.544	0.437	0.326	9.1e-23
FB|FBgn0029608	303	CG3091 [Drosophila melanogaste	0.688	0.567	0.355	1e-22
FB|FBgn0050339	308	CG30339 [Drosophila melanogast	0.552	0.448	0.398	1.6e-22
FB|FBgn0029863	295	CG3823 [Drosophila melanogaste	0.548	0.464	0.35	4.9e-21
UNIPROTKB|F1N086	282	TTPA "Uncharacterized protein"	0.452	0.400	0.350	1.5e-19
UNIPROTKB|Q5F355	300	TTPAL "Uncharacterized protein	0.38	0.316	0.418	1.9e-19

FB|FBgn0037323 CG2663 [Drosophila melanogaster (taxid:7227)]

 Score = 503 (182.1 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
 Identities = 90/141 (63%), Positives = 114/141 (80%)

Query:   110 AAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVV 169
             AAH AKF+PT++KKFLI VQEAYPVK+KE+H+IN S +VDTI N VKPF+KEKIR+RI  
Sbjct:   175 AAHFAKFSPTVVKKFLIAVQEAYPVKVKEVHVINISPLVDTIFNFVKPFVKEKIRSRITF 234

Query:   170 HADMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPG 229
             H D+ESLYK +P+D+LP EYGG AG +  +N+ W +K+     WFK+QE  KA+E+ RPG
Sbjct:   235 HNDVESLYKVVPRDLLPNEYGGKAGGVVELNQWWKQKLVDNTQWFKDQEDKKANESLRPG 294

Query:   230 KPKTHDDLFGMEGSFKQLSID 250
              PKT DDLFGMEG+F+QL+ID
Sbjct:   295 APKTSDDLFGMEGTFRQLNID 315

GO:0008431 "vitamin E binding" evidence=ISS

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

FB|FBgn0053514 CG33514 [Drosophila melanogaster (taxid:7227)]

 Score = 293 (108.2 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
 Identities = 58/142 (40%), Positives = 89/142 (62%)

Query:   110 AAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVV 169
             AAH+ + TP++ KKF +  +EA P++LK  H IN     + + N+ KP + +K+++R+ V
Sbjct:   170 AAHLFQMTPSMAKKFTVFSEEALPLRLKAQHFINTITGFEQLFNMFKPMMSKKMQSRLFV 229

Query:   170 HAD-MESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRP 228
             H + M  L + IP   LPEEYGG  G  + I     KK++ Y D+F+E      DE+ RP
Sbjct:   230 HGNKMGLLTEQIPLKYLPEEYGGENGTTQDIVAAMEKKLDEYADFFQENVNFGTDESLRP 289

Query:   229 GKPKTHDDLFGMEGSFKQLSID 250
             GKP   + LFG+EGSF++L++D
Sbjct:   290 GKPIDFEGLFGVEGSFRKLNVD 311

GO:0008431 "vitamin E binding" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

FB|FBgn0053966 CG33966 [Drosophila melanogaster (taxid:7227)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 55/140 (39%), Positives = 89/140 (63%)

Query:   112 HIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA 171
             H  + +P+  KK  +  +EA P++ + IH IN     DTI N++KP + +K + R+ VH 
Sbjct:   171 HFLQMSPSFAKKMTVFQEEALPLRPQGIHFINTPNGFDTIFNMIKPMMSKKQQGRLYVHG 230

Query:   172 DM-ESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGK 230
                E+LY  IPK  LP EYGG  G I  + +QW ++I +YR++++E++    DE+ R G+
Sbjct:   231 SKWEALYNQIPKQYLPVEYGGENGSIPELLQQWEQRILAYRNYWEEEKNYGTDESLRVGQ 290

Query:   231 PKTHDDLFGMEGSFKQLSID 250
             P   + LFG++GSF+QL++D
Sbjct:   291 PVDFESLFGLQGSFRQLNVD 310

GO:0008431 "vitamin E binding" evidence=ISS

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

FB|FBgn0033437 CG12926 [Drosophila melanogaster (taxid:7227)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 53/141 (37%), Positives = 87/141 (61%)

Query:   110 AAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVV 169
             A H+ +F   L+KK  +   +AYP + K  H +NA    +  +++ K  + EKIR R  +
Sbjct:   173 AGHLFQFDAVLVKKLAVLGDKAYPYRPKGFHFVNAPSSAEKFMSIAKSLMSEKIRKRFHI 232

Query:   170 HADMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPG 229
             H+ ++SLYK +PK+ LP EYGG  G I+ +   W  K+ +Y+ +F+E+ +   +E  R G
Sbjct:   233 HSKLDSLYKYVPKECLPAEYGGSNGTIQDVVSTWRTKLLAYKPFFEEEASYGTNEKLRRG 292

Query:   230 KPKTHDDLFGMEGSFKQLSID 250
             +P + + LFG+EGSF++L ID
Sbjct:   293 QPVSAESLFGIEGSFRKLDID 313

GO:0008431 "vitamin E binding" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

FB|FBgn0039107 CG10300 [Drosophila melanogaster (taxid:7227)]

 Score = 204 (76.9 bits), Expect = 9.1e-23, Sum P(2) = 9.1e-23
 Identities = 45/138 (32%), Positives = 71/138 (51%)

Query:   115 KFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADME 174
             ++ P L+KK    V +  P++  EIH+IN      TI N V  F+  K+  + VVH   E
Sbjct:   174 QYDPFLLKKAFALVDQCIPLRFVEIHMINMRKEGQTIFNFVTKFLPSKLPFKFVVHKKSE 233

Query:   175 SLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPKT- 233
              LY+ +P+DV+  EYGG  G      + W +K+   +D+  +      +E  R G     
Sbjct:   234 DLYQHLPRDVMTIEYGGTNGYQAEAVDHWRQKLLDSKDYLAKDAQYGTNEKLRVGLASAW 293

Query:   234 -HDDLFGMEGSFKQLSID 250
              + +L GM GSF++L +D
Sbjct:   294 ANGELDGMSGSFRKLELD 311

GO:0008431 "vitamin E binding" evidence=ISS

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

FB|FBgn0029608 CG3091 [Drosophila melanogaster (taxid:7227)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 70/197 (35%), Positives = 106/197 (53%)

Query:    22 MPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLK----EESVGVAGDVYVF 77
             +PG+TP G ++I  R +DLD   + ++    K+ +M+ D R      E   G   D YV 
Sbjct:   102 LPGVTPQGNKLIFFRMADLDP-RTRNSVEETKIFVMMSDARFTKPDVERETGSGAD-YVL 159

Query:    78 DAA-IATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKL 136
             D A IA        I  +T               A+++ F   +  KFL   QEAYP +L
Sbjct:   160 DEADIAEGDVQIVDIGGYT-----------LRHLAYVSIFVLRVYMKFL---QEAYPSRL 205

Query:   137 KEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD-MESLYKSIPKDVLPEEYGGYAGD 195
             + +H+IN    +D +I+++ PF++E++RN I  H + M+SLYK +P+D+LP EYGG AG 
Sbjct:   206 QAMHVINCPTYLDKLISMMSPFLREEVRNMIRYHTEGMDSLYKEVPRDMLPNEYGGKAG- 264

Query:   196 IKTINEQWMKKIESYRD 212
               T+ E   K I+S RD
Sbjct:   265 --TVAELKAKGIQSIRD 279

GO:0008431 "vitamin E binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

FB|FBgn0050339 CG30339 [Drosophila melanogaster (taxid:7227)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 55/138 (39%), Positives = 80/138 (57%)

Query:   113 IAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD 172
             +A+   TLIK+  I  ++A P +LK +H+IN       ++NL K  +  K++ R  V+ +
Sbjct:   171 LAQLDFTLIKRMGIFAEKAQPTRLKGVHLINCPKEGVALLNLAKSLMPSKLQQRFHVYKN 230

Query:   173 MESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGKPK 232
             +E L + IP++ LPEEYGG  G I  I  +  KK+ SY  +F E      DE  RPGK  
Sbjct:   231 LEQLNEVIPREYLPEEYGGNNGRIADIQAEAEKKLLSYESYFAEDSQYGVDEQLRPGKRV 290

Query:   233 THDDLFGMEGSFKQLSID 250
               D +FG EGSF++L ID
Sbjct:   291 NADSIFGAEGSFRKLDID 308

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

FB|FBgn0029863 CG3823 [Drosophila melanogaster (taxid:7227)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 49/140 (35%), Positives = 84/140 (60%)

Query:   112 HIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA 171
             H+ K     ++ ++  VQEA+PV+LKEIH++N    VD ++ +VKPFIK ++   I  H 
Sbjct:   158 HLTKTALGALRVYMKFVQEAHPVRLKEIHVLNCPSYVDKVMAVVKPFIKGEVFKLIHFHL 217

Query:   172 -DMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQETVKADEAKRPGK 230
              + ++ Y+  P+ +LPEEYGG AG +  +  QWM+ ++  RD+  + E  + ++ K+ G+
Sbjct:   218 PNADTPYRHFPRSMLPEEYGGEAGKMSDLKLQWMQLLKEQRDYLMDTENWQINKIKKNGQ 277

Query:   231 PKTHDDLFGMEGSFKQLSID 250
              K+ D   G+    + L ID
Sbjct:   278 RKSSDS--GVTEGLRSLEID 295

GO:0008431 "vitamin E binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

UNIPROTKB|F1N086 TTPA "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 197 (74.4 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
 Identities = 41/117 (35%), Positives = 69/117 (58%)

Query:   111 AHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH 170
             AH  + TP++ KK    + +++P+K++ IH+IN   I   + +++KPF+ EKI+ RI +H
Sbjct:   165 AHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPIIFHAVFSMIKPFLTEKIKERIHMH 224

Query:   171 AD--MESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKE-QETVKADE 224
              D   +SL +  P D+LP EYGG    I+ I ++W   I    ++     +TVK +E
Sbjct:   225 GDNYKQSLLQYFP-DILPLEYGGEEYSIEDICQEWTNFIMKSENYLSSISQTVKGEE 280

GO:0090212 "negative regulation of establishment of blood-brain barrier" evidence=IEA

GO:0042360 "vitamin E metabolic process" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0001892 "embryonic placenta development" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

UNIPROTKB|Q5F355 TTPAL "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 201 (75.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
 Identities = 41/98 (41%), Positives = 63/98 (64%)

Query:   116 FTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH-ADME 174
             F P + KK +  +Q+ +P+++K ++IIN   I   I  ++KPF+KEKI NR  +H +D+ 
Sbjct:   198 FGPFVAKKVIGILQDGFPIRIKAVNIINEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLN 257

Query:   175 SLYKSIPKDVLPEEYGGYAG--DIKTINEQWMKKIESY 210
             SL+++IP  +LPEEYGG AG  DI   NE  +   E +
Sbjct:   258 SLHQNIPPVILPEEYGGTAGKLDISAWNELLLASEEDF 295

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	250
cd00170	157	cd00170, SEC14, Sec14p-like lipid-binding domain	2e-26
pfam00650	152	pfam00650, CRAL_TRIO, CRAL/TRIO domain	7e-25
smart00516	158	smart00516, SEC14, Domain in homologues of a S	4e-16
pfam13716	149	pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain	1e-05

>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain

 Score =  100 bits (250), Expect = 2e-26
 Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 32/174 (18%)

Query: 22  MPGLTPNGRRVIIMRAS--DLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDA 79
           + G    GR V+I+RA   DL + L ++    ++ ++   +  L+E+   V G V + D 
Sbjct: 13  LGGRDKEGRPVLIIRAGNKDLSKSLDSEEL--LRYLVYTLEKLLQEDDEQVEGFVVIID- 69

Query: 80  AIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEI 139
                                     ++  +       P+L+KK L  +Q+ YP +LK +
Sbjct: 70  --------------------------LKGLSLSHLLPDPSLLKKILKILQDNYPERLKAV 103

Query: 140 HIINASGIVDTIINLVKPFIKEKIRNRIVVH-ADMESLYKSIPKDVLPEEYGGY 192
           +IIN       +  +VKPF+ EK R +IV   +D E L K I K+ LPEEYGG 
Sbjct: 104 YIINPPWFFKVLWKIVKPFLSEKTRKKIVFLGSDKEELLKYIDKEQLPEEYGGT 157

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157

>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain

 Score = 95.8 bits (239), Expect = 7e-25
 Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 28/174 (16%)

Query: 20  TPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDA 79
             + G    GR V+ +R    D   S+       LVL++    L      + G   + D 
Sbjct: 4   GYLHGRDKEGRPVLYLRPGRHDPKKSSLEELVRFLVLVLERALLLLPEGQIEGITVIIDM 63

Query: 80  AIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEI 139
              +                           +++ K+  + +KK L  +Q+ YP +L +I
Sbjct: 64  KGLSL--------------------------SNMDKWPISFLKKILKILQDNYPERLGKI 97

Query: 140 HIINASGIVDTIINLVKPFIKEKIRNRIVVH--ADMESLYKSIPKDVLPEEYGG 191
            I+NA  I + I  L+KPF+  K R +I  H  +++E L K IP + LP+EYGG
Sbjct: 98  LIVNAPWIFNVIWKLIKPFLDPKTREKIHFHKNSNLEELLKYIPPEQLPKEYGG 151

Length = 152

>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S

 Score = 73.1 bits (180), Expect = 4e-16
 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%)

Query: 92  AKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTI 151
            +     I+ F +        ++    ++++K L  +Q+ YP +L +++IIN       +
Sbjct: 54  EEKKTGGIEGFTVIFDLKGLSMSNPDLSVLRKILKILQDHYPERLGKVYIINPPWFFRVL 113

Query: 152 INLVKPFIKEKIRNRIVVH--ADMESLYKSIPKDVLPEEYGGY 192
             ++KPF+ EK R +I        E L + I K+ LPEE GG 
Sbjct: 114 WKIIKPFLDEKTREKIRFVGNDSKEELLEYIDKEQLPEELGGT 156

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158

>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 115 KFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTII-NLVKPFIKEKIRNRIVVHAD- 172
           K + + +KK    +  A+P  LK ++I++ S  +   +  L + F  +K+  + V++   
Sbjct: 64  KPSWSWLKKLYKLLPRAFPKNLKAVYIVHPSTFLKKFLKTLGRLFSSKKLFKKKVIYVSS 123

Query: 173 MESLYKSIPKDVLPEEYGG 191
           +  L + I    LP E GG
Sbjct: 124 LSELSEYIDPTQLPLELGG 142

This family includes divergent members of the CRAL-TRIO domain family. This family includes ECM25 that contains a divergent CRAL-TRIO domain identified by Gallego and colleagues. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	250
PF00650	159	CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T	99.97
smart00516	158	SEC14 Domain in homologues of a S. cerevisiae phos	99.97
cd00170	157	SEC14 Sec14p-like lipid-binding domain. Found in s	99.96
KOG1471|consensus	317		99.95
KOG1470|consensus	324		99.94
PF13716	149	CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q	99.56
KOG4406|consensus	467		98.47

>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=99.97  E-value=1.1e-32  Score=225.22  Aligned_cols=149  Identities=28%  Similarity=0.417  Sum_probs=122.3

Q ss_pred             eeeecCCCCCCCCCeEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhcC--CCcccEEEEEecCCCCccccccccccc
Q psy12552         17 HNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEES--VGVAGDVYVFDAAIATPQNFAAHIAKF   94 (250)
Q Consensus        17 g~~~~l~g~D~~Gr~Vi~~r~~~~d~~~~~~~~~~~r~~~~~~e~~l~~~~--~~~~g~v~I~D~~g~s~~N~~~~~~~~   94 (250)
                      +...+++|+|++||||+++|++++++ .+.+..+++|+.++++|.+++...  .++.|+++|+|++|++++         
T Consensus         6 ~~~~~~~g~D~~gr~v~~~~~~~~~~-~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~iiD~~g~~~~---------   75 (159)
T PF00650_consen    6 SGPFYLHGRDKDGRPVIYIRLGRFDP-KKFSPEDVIRFFVYLLERMLKRMPEGGQVEGIVVIIDLSGFSLS---------   75 (159)
T ss_dssp             TSCEEEEEE-TTS-EEEEEEGTT--H-HTS-HHHHHHHHHHHHHHHHHTHHHTSHHH-EEEEEE-TT--HH---------
T ss_pred             CeeEEECCCCCCcCEEEEEEcccCCC-CcCCHHHHHHHHHHHHHHHHhhhcccccceeEEEEEeCCCceEe---------
Confidence            44556689999999999999999999 889999999999999999985433  468999999999999994         


Q ss_pred             cchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEeCC--
Q psy12552         95 TPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD--  172 (250)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~~~--  172 (250)
                                       ++...+++.++.+++++|++||+|++++|+||+|++++.+|+++++||++++++||+++++  
T Consensus        76 -----------------~~~~~~~~~~k~~~~~~~~~yP~rl~~i~iin~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~  138 (159)
T PF00650_consen   76 -----------------NFDWWPISFLKKIIQLLQDHYPERLGKIYIINAPWFFRVLWKIVKPFLSPKTREKIVFHSGSD  138 (159)
T ss_dssp             -----------------HHHCHHHHHHHHHHHHHHHHSTTTEEEEEEES--TTHHHHHHHHGGGS-HHHHCTEEEECTTC
T ss_pred             -----------------ccccchhhhhhhhhhhhcccCCccceeEEEEecChhhhhhHhHHHhhcCHhhheeEEEECCcc
Confidence                             4443347889999999999999999999999999999999999999999999999999964  


Q ss_pred             -hHHHHhhCCCCCCcccCCCC
Q psy12552        173 -MESLYKSIPKDVLPEEYGGY  192 (250)
Q Consensus       173 -~~~L~~~i~~~~LP~eyGG~  192 (250)
                       .++|.++||+++||.+|||+
T Consensus       139 ~~~~l~~~i~~~~lP~~~GG~  159 (159)
T PF00650_consen  139 WKAKLKEYIDPEQLPVEYGGT  159 (159)
T ss_dssp             HCHHHCCCSTGGGSBGGGTSS
T ss_pred             cHHHHHhhCCHhHCchhcCCC
Confidence             26899999999999999996

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1OLM_E 1O6U_E 3Q8G_A 3B7Q_B 3B7Z_A ....

>smart00516 SEC14 Domain in homologues of a S

Probab=99.97  E-value=2e-30  Score=211.69  Aligned_cols=140  Identities=28%  Similarity=0.471  Sum_probs=132.2

Q ss_pred             CCCCCCCeEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhh--cCCCcccEEEEEecCCCCccccccccccccchhhhH
Q psy12552         24 GLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKE--ESVGVAGDVYVFDAAIATPQNFAAHIAKFTPTLIKK  101 (250)
Q Consensus        24 g~D~~Gr~Vi~~r~~~~d~~~~~~~~~~~r~~~~~~e~~l~~--~~~~~~g~v~I~D~~g~s~~N~~~~~~~~~~~~~~~  101 (250)
                      |+|++||||++++++++++ +..+.++++|++++.+|.++..  ++.++.|+++|+|++|+++                 
T Consensus        14 g~D~~GrpV~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~i~D~~~~~~-----------------   75 (158)
T smart00516       14 GYDKDGRPVLIFRAGRFDL-KSVTLEELLRYLVYVLEKILQREKKTGGIEGFTVIFDLKGLSM-----------------   75 (158)
T ss_pred             CCCCCcCEEEEEecccccc-CcCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEEEEECCCCCc-----------------
Confidence            7999999999999999998 8999999999999999999876  5566899999999999999                 


Q ss_pred             HHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEeCC--hHHHHhh
Q psy12552        102 FLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD--MESLYKS  179 (250)
Q Consensus       102 ~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~~~--~~~L~~~  179 (250)
                               +|   ++++.+|+++..++++||+|++++||||+|++++++|+++++|+++++++||+++++  .++|.++
T Consensus        76 ---------~~---~~~~~lk~~~~~~~~~yp~~l~~i~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~~~~L~~~  143 (158)
T smart00516       76 ---------SN---PDLSVLRKILKILQDHYPERLGKVLIINPPWFFRVLWKIIKPFLDEKTREKIRFVGNDSKEELLEY  143 (158)
T ss_pred             ---------cc---ccHHHHHHHHHHHHHHhHHHhCeEEEECCCHHHHHHHHHHHhhcChhhhccEEEeCCCCHHHHHhh
Confidence                     44   567899999999999999999999999999999999999999999999999999986  8999999


Q ss_pred             CCCCCCcccCCCCC
Q psy12552        180 IPKDVLPEEYGGYA  193 (250)
Q Consensus       180 i~~~~LP~eyGG~~  193 (250)
                      +|+++||++|||++
T Consensus       144 i~~~~lP~~~GG~~  157 (158)
T smart00516      144 IDPEQLPEELGGTL  157 (158)
T ss_pred             CCHhhCcHhhCCCC
Confidence            99999999999986

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>cd00170 SEC14 Sec14p-like lipid-binding domain

Probab=99.96  E-value=1.4e-28  Score=197.85  Aligned_cols=149  Identities=34%  Similarity=0.508  Sum_probs=133.1

Q ss_pred             eeeecCCCCCCCCCeEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhcCCCcccEEEEEecCCCCccccccccccccc
Q psy12552         17 HNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTP   96 (250)
Q Consensus        17 g~~~~l~g~D~~Gr~Vi~~r~~~~d~~~~~~~~~~~r~~~~~~e~~l~~~~~~~~g~v~I~D~~g~s~~N~~~~~~~~~~   96 (250)
                      +.+...+|+|++||||++++++..++-...+..+.+++.++.+|..+.++..+..|+++|+|++|+++            
T Consensus         8 ~~~~~~~~~D~~gr~V~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~i~D~~~~~~------------   75 (157)
T cd00170           8 GKVGYLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQEDDEQVEGFVVIIDLKGLSL------------   75 (157)
T ss_pred             ecccccCCCCCCcCEEEEEecCCcchhhcCCHHHHHHHHHHHHHHHHhhhhhcccceEEEEECCCCCh------------
Confidence            35555566899999999999996555134456899999999999999888776789999999999999            


Q ss_pred             hhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEeCC-hHH
Q psy12552         97 TLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD-MES  175 (250)
Q Consensus        97 ~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~~~-~~~  175 (250)
                                    +++. .+++.+|+++..++++||+|++++|+||+|++++.+|+++++|+++++++||+++++ .++
T Consensus        76 --------------~~~~-~~~~~~k~~~~~~~~~yp~~l~~v~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~~~  140 (157)
T cd00170          76 --------------SHLL-PDPSLLKKILKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKTRKKIVFLGSDKEE  140 (157)
T ss_pred             --------------hccc-hhHHHHHHHHHHHHHhChHhhCeEEEECCCHhHHHHHHHHHHhcCHhhhhhEEEecCCHHH
Confidence                          4554 567889999999999999999999999999999999999999999999999999988 899


Q ss_pred             HHhhCCCCCCcccCCCC
Q psy12552        176 LYKSIPKDVLPEEYGGY  192 (250)
Q Consensus       176 L~~~i~~~~LP~eyGG~  192 (250)
                      |.+++|+++||.+|||+
T Consensus       141 L~~~i~~~~Lp~~~GG~  157 (157)
T cd00170         141 LLKYIDKEQLPEEYGGT  157 (157)
T ss_pred             HHhhCChhhCcHhhCCC
Confidence            99999999999999996

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>KOG1471|consensus

Probab=99.95  E-value=5.4e-28  Score=220.28  Aligned_cols=152  Identities=39%  Similarity=0.630  Sum_probs=131.4

Q ss_pred             eecCCCCCCCCCeEEEEecCCCCc---ccCCC--------HHHHHHHHHHHHHHHHhhcCCCcccEEEEEecCCCCcccc
Q psy12552         19 STPMPGLTPNGRRVIIMRASDLDQ---VLSAD--------AATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNF   87 (250)
Q Consensus        19 ~~~l~g~D~~Gr~Vi~~r~~~~d~---~~~~~--------~~~~~r~~~~~~e~~l~~~~~~~~g~v~I~D~~g~s~~N~   87 (250)
                      ...++|.|+.|+||.+.+.+..+.   +....        ..+..+...+.+|........+++|++.|+|++|+++   
T Consensus        96 ~~~~~~~~~~g~~v~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~~~I~Dl~G~~~---  172 (317)
T KOG1471|consen   96 PQGLHGVDKEGRPVYIERLGKIDPKGLLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGIVTIFDLKGVSL---  172 (317)
T ss_pred             cccccccCCCCCEEEEeccCCCCcccceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeEEEEECCCCcc---
Confidence            345678899999999999888876   22233        3445566666666666666667999999999999999   


Q ss_pred             ccccccccchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcE
Q psy12552         88 AAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRI  167 (250)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri  167 (250)
                                             +|+.+..++.+++++.++|++||+|++++||||+|++|+++|+++||||+++|++||
T Consensus       173 -----------------------~~~~~~~~~~~~~~~~~~q~~yPe~l~~~~iIN~P~~f~~~~~~ikpfL~~kt~~ki  229 (317)
T KOG1471|consen  173 -----------------------SHLLKPAPTLLKKILKILQDNYPERLKRIHIINAPTIFSALWKVVKPFLDEKTRKKI  229 (317)
T ss_pred             -----------------------hhHHHHHHHHHHHHHHHHHHhCHHhhceEEEEcCchhHHHHHHHHhccCCHHHHhhh
Confidence                                   888889999999999999999999999999999999999999999999999999999


Q ss_pred             E-EeC-ChHHHHhhCCCCCCcccCCCCCCCh
Q psy12552        168 V-VHA-DMESLYKSIPKDVLPEEYGGYAGDI  196 (250)
Q Consensus       168 ~-~~~-~~~~L~~~i~~~~LP~eyGG~~~~~  196 (250)
                      + +++ +.++|+++||+++||.+|||++++.
T Consensus       230 ~~~~~~~~~~L~k~i~~~~LP~~yGG~~~~~  260 (317)
T KOG1471|consen  230 HVLHSKDKESLLKYIPPEVLPEEYGGTCGDL  260 (317)
T ss_pred             eecCCCchhhhhhhCCHhhCccccCCCcccc
Confidence            9 554 4999999999999999999999876

>KOG1470|consensus

Probab=99.94  E-value=1.1e-26  Score=211.15  Aligned_cols=151  Identities=20%  Similarity=0.288  Sum_probs=139.8

Q ss_pred             eccceeeecCCCCCCCCCeEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhcCCCcccEEEEEecCCCCccccccccc
Q psy12552         13 SKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIA   92 (250)
Q Consensus        13 ~l~~g~~~~l~g~D~~Gr~Vi~~r~~~~d~~~~~~~~~~~r~~~~~~e~~l~~~~~~~~g~v~I~D~~g~s~~N~~~~~~   92 (250)
                      .++.|.++.+ |.|++||||+|+|+....+ ++.+..+..|++++++|.++...+.+..++++++|++|+|++|+|.   
T Consensus        94 e~~tGK~yi~-G~D~~gRPVl~~~~~~~~q-n~~t~~~~~r~~Vy~mE~Ai~~lp~~qe~~~~L~D~~~fs~sN~d~---  168 (324)
T KOG1470|consen   94 ELETGKAYIL-GHDKDGRPVLYLRPRPHRQ-NTKTQKELERLLVYTLENAILFLPPGQEQFVWLFDLTGFSMSNPDI---  168 (324)
T ss_pred             HhhcCcEEEe-cccCCCCeEEEEecCCCCC-CCCCHHHHHHHHHHHHHHHHHhCCCCcceEEEEEecccCcccCCCc---
Confidence            4678889887 7999999999999888888 8899999999999999999988887788999999999999988654   


Q ss_pred             cccchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEeCC
Q psy12552         93 KFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD  172 (250)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~~~  172 (250)
                                                ...+.++.++|++||+||+..+++|+|++|..+|+++|||++++|++||.|..+
T Consensus       169 --------------------------~~~k~~~~~lq~hYPErLg~a~l~~~P~iF~~~wkiikpflDp~t~~Kv~F~~~  222 (324)
T KOG1470|consen  169 --------------------------KFLKELLHILQDHYPERLGKALLVNAPWIFQPFWKIIKPFLDPKTASKVKFVEP  222 (324)
T ss_pred             --------------------------HHHHHHHHHHHHhChHHhhhhhhcCChHHHHHHHHHhhhccChhhhceeEEecC
Confidence                                      467889999999999999999999999999999999999999999999999977


Q ss_pred             hHHHHhhCCCCCCcccCCCCCC
Q psy12552        173 MESLYKSIPKDVLPEEYGGYAG  194 (250)
Q Consensus       173 ~~~L~~~i~~~~LP~eyGG~~~  194 (250)
                      .+.+.++||+++||..|||+..
T Consensus       223 ~~~l~~~~d~~~l~s~~GG~~~  244 (324)
T KOG1470|consen  223 KDDLSEYFDESQLPSLFGGKLL  244 (324)
T ss_pred             hhHHHhhCCccccchhhCCCcc
Confidence            7789999999999999999763

>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A

Probab=99.56  E-value=2.7e-15  Score=122.45  Aligned_cols=136  Identities=24%  Similarity=0.329  Sum_probs=96.2

Q ss_pred             CCCCCCCCeEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhcCCCcccEEEEEecCCCCccccccccccccchhhhHH
Q psy12552         23 PGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTPTLIKKF  102 (250)
Q Consensus        23 ~g~D~~Gr~Vi~~r~~~~d~~~~~~~~~~~r~~~~~~e~~l~~~~~~~~g~v~I~D~~g~s~~N~~~~~~~~~~~~~~~~  102 (250)
                      .|+|++||||+++...+. + ...   +.-++..|++..+..+  ....++++|+|+++++..|                
T Consensus         7 gG~d~~g~pV~~~~~~~~-~-~~~---~~~~ll~yl~~~l~~~--~~~~~f~vVid~~~~~~~~----------------   63 (149)
T PF13716_consen    7 GGRDREGRPVVVFIASRL-P-SSD---DLERLLLYLLSTLSEE--VVDKPFSVVIDHTGFSRSS----------------   63 (149)
T ss_dssp             EEEBTTS-EEEEEEGGG--C--TT---HHHHHHHHHHHHH-TT--TTTS-EEEEEE-TT--GGG----------------
T ss_pred             cccCCCcCEEEEEECCcC-c-chh---hHHHHHHHHHHhhhHH--hcCCCEEEEEEcCCCcccc----------------
Confidence            579999999999998887 5 333   6666666666654333  2246799999999998743                


Q ss_pred             HHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHH-HHHhhcccccc-cCcEEEeCChHHHHhhC
Q psy12552        103 LICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTII-NLVKPFIKEKI-RNRIVVHADMESLYKSI  180 (250)
Q Consensus       103 ~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~-~lvk~fL~~k~-~~ri~~~~~~~~L~~~i  180 (250)
                                  +.+.+.++++...+...|+.++++++|+|++++++.+. .+.+++.+++. .++|.+..+.++|.++|
T Consensus        64 ------------~~~~~~l~~~~~~l~~~~~~nl~~vyiv~p~~~~k~~~~~~~~~~~~~~~~~~kv~~~~sl~~L~~~i  131 (149)
T PF13716_consen   64 ------------EPSLSWLKQLYKLLPRKYKKNLKKVYIVHPNWFLKKILATLLRPFVSSKFWKKKVVYVSSLSELSKHI  131 (149)
T ss_dssp             ---------------HHHHHHTTTSS-HHHHHTEEEEEEES--HHHHHHHHHTTTTGGGGTT--TTEEEESSTCGGGGTS
T ss_pred             ------------CCchHHHHHHHHHHHHHHhhceEEEEEECCCHHHHHHHHHHhcccccccccceEEEEECCHHHHHhhC
Confidence                        23456788999999999999999999999999999999 66678889998 99999999999999999


Q ss_pred             CCCCCcccCCCCC
Q psy12552        181 PKDVLPEEYGGYA  193 (250)
Q Consensus       181 ~~~~LP~eyGG~~  193 (250)
                      |+++||.+.||+.
T Consensus       132 ~~~qL~~~lp~~~  144 (149)
T PF13716_consen  132 DPSQLPESLPGVL  144 (149)
T ss_dssp             GGGG------HHH
T ss_pred             CHHHhcccCCCEE
Confidence            9999999999776

>KOG4406|consensus

Probab=98.47  E-value=1.1e-06  Score=82.52  Aligned_cols=133  Identities=16%  Similarity=0.233  Sum_probs=104.9

Q ss_pred             eeeecCCC-CCCCCCeEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhcCCCcccEEEEEecCCCCcccccccccccc
Q psy12552         17 HNSTPMPG-LTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFT   95 (250)
Q Consensus        17 g~~~~l~g-~D~~Gr~Vi~~r~~~~d~~~~~~~~~~~r~~~~~~e~~l~~~~~~~~g~v~I~D~~g~s~~N~~~~~~~~~   95 (250)
                      ++..+..+ .|+.||.|+.+-+.++.+.++.+-..++++..+.+|..++++      ++.++=-.|+...|..       
T Consensus        80 ei~qvi~~~~D~~gr~iivv~a~rlp~~~eld~~~li~~~v~~id~~Ve~D------Yt~vYfh~gl~s~nkp-------  146 (467)
T KOG4406|consen   80 EILQVIGDAKDKQGRKIIVVYACRLPSSSELDDIRLISYLVYTIDKYVEND------YTLVYFHHGLPSDNKP-------  146 (467)
T ss_pred             heeeeccCcccccCCeeEEEEEecCCchhhhhhHHHHHHHHHHHHHHHhcc------ceeeehhcCCcccccc-------
Confidence            34444444 699999999999999876556666668999999999887654      6677777777765522       


Q ss_pred             chhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEeCChHH
Q psy12552         96 PTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHADMES  175 (250)
Q Consensus        96 ~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~~~~~~  175 (250)
                                           ..+.+.+...-+..+|--.++.+|+|.+-|+..++|+++||+++.|..+||+-.++.++
T Consensus       147 ---------------------~l~~l~~aYke~Dr~~~KNlKalYvvHptwfikvi~n~~kplIS~KF~rKi~Y~n~lse  205 (467)
T KOG4406|consen  147 ---------------------YLQLLFDAYKELDRNFKKNLKALYVVHPTWFIKVIWNLFKPLISLKFTRKIIYFNSLSE  205 (467)
T ss_pred             ---------------------hHHHHHHHHHHHHHHHhhhhhheEEecHHHHHHHHHHHHhhhcchhhhceeEEeehHHH
Confidence                                 23444555555566688889999999999999999999999999999999999988999


Q ss_pred             HHhhCCCC
Q psy12552        176 LYKSIPKD  183 (250)
Q Consensus       176 L~~~i~~~  183 (250)
                      |.++++-+
T Consensus       206 L~~~l~l~  213 (467)
T KOG4406|consen  206 LFEALKLN  213 (467)
T ss_pred             HHHhhhhh
Confidence            99887633

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	250
1oip_A	278	The Molecular Basis Of Vitamin E Retention: Structu		3e-13
1r5l_A	262	Crystal Structure Of Human Alpha-tocopherol Transfe		2e-12
3hy5_A	316	Crystal Structure Of Cralbp Length = 316		2e-10
3hx3_A	316	Crystal Structure Of Cralbp Mutant R234w Length = 3		1e-09
1olm_E	403	Supernatant Protein Factor In Complex With Rrr-Alph		8e-07
1olm_A	403	Supernatant Protein Factor In Complex With Rrr-Alph		8e-07
1o6u_A	403	The Crystal Structure Of Human Supernatant Protein		1e-06

>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 111 AHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH 170
           +H  + TP++ KK    + +++P+K++ IH+IN   I   + +++KPF+ EKI+ RI +H
Sbjct: 166 SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMH 225
Query: 171 AD--MESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWF 214
            +   +SL +  P D+LP EYGG    ++ I ++W   I    D+ 
Sbjct: 226 GNNYKQSLLQHFP-DILPLEYGGEEFSMEDICQEWTNFIMKSEDYL 270

>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 111 AHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH 170
           +H  + TP++ KK    + +++P+K++ IH+IN   I   + + +KPF+ EKI+ RI  H
Sbjct: 150 SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSXIKPFLTEKIKERIHXH 209
Query: 171 AD--MESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWF 214
            +   +SL +  P D+LP EYGG     + I ++W   I    D+ 
Sbjct: 210 GNNYKQSLLQHFP-DILPLEYGGEEFSXEDICQEWTNFIXKSEDYL 254

>pdb|3HY5|A Chain A, Crystal Structure Of Cralbp Length = 316

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 97  TLIKKFLICVQNFAAHIAKFTPTL----IKKFLICVQEAYPVKLKEIHIINASGIVDTII 152
           T I  F I ++NF     +   +L    ++K +  +Q+++P + K IH I+      T  
Sbjct: 192 TQINGFCI-IENFKGFTMQQAASLRTSDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTY 250
Query: 153 NLVKPFIKEKIRNRIVVHA-DMESLYKSIPKDVLPEEYGG 191
           N+VKPF+K K+  R+ VH  D+   Y+ I +++LP ++GG
Sbjct: 251 NVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGG 290

>pdb|3HX3|A Chain A, Crystal Structure Of Cralbp Mutant R234w Length = 316

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 97  TLIKKFLICVQNFAAHIAKFTPTL----IKKFLICVQEAYPVKLKEIHIINASGIVDTII 152
           T I  F I ++NF     +   +L    ++K +  +Q+++P   K IH I+      T  
Sbjct: 192 TQINGFCI-IENFKGFTXQQAASLRTSDLRKXVDXLQDSFPAWFKAIHFIHQPWYFTTTY 250
Query: 153 NLVKPFIKEKIRNRIVVHA-DMESLYKSIPKDVLPEEYGG 191
           N+VKPF+K K+  R+ VH  D+   Y+ I +++LP ++GG
Sbjct: 251 NVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGG 290

>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 112 HIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA 171
           H+ K       +FL   +E YP  LK + ++ A  +     NL+KPF+ E  R +I+V  
Sbjct: 162 HLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLG 221
Query: 172 D--MESLYKSIPKDVLPEEYGGYAGD 195
               E L K I  D +P EYGG   D
Sbjct: 222 ANWKEVLLKHISPDQVPVEYGGTMTD 247

>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 112 HIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA 171
           H+ K       +FL   +E YP  LK + ++ A  +     NL+KPF+ E  R +I+V  
Sbjct: 162 HLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLG 221
Query: 172 D--MESLYKSIPKDVLPEEYGGYAGD 195
               E L K I  D +P EYGG   D
Sbjct: 222 ANWKEVLLKHISPDQVPVEYGGTMTD 247

>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 112 HIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA 171
           H+ K       +FL   +E YP  LK + ++ A  +     NL+KPF+ E  R +I V  
Sbjct: 162 HLWKPAVEAYGEFLCXFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIXVLG 221
Query: 172 D--MESLYKSIPKDVLPEEYGGYAGD 195
               E L K I  D +P EYGG   D
Sbjct: 222 ANWKEVLLKHISPDQVPVEYGGTXTD 247

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	250
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	2e-56
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	4e-47
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	1e-15
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	8e-13
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	3e-12

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262

 Score =  180 bits (459), Expect = 2e-56
 Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 32/202 (15%)

Query: 20  TPMPGLTPNGRRVIIMRASDLD-QVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFD 78
             +    P G +V+I R +  D +V +A      ++ L+  ++ ++E      G   +FD
Sbjct: 86  GVLRSRDPTGSKVLIYRIAHWDPKVFTAYDV--FRVSLITSELIVQEVETQRNGIKAIFD 143

Query: 79  AAIATPQNFAAHIAKFTPTLIKKFLICVQNF-AAHIAKFTPTLIKKFLICVQEAYPVKLK 137
                                      ++ +  +H  + TP++ KK    + +++P+K++
Sbjct: 144 ---------------------------LEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVR 176

Query: 138 EIHIINASGIVDTIINLVKPFIKEKIRNRIVVH-ADMESLYKSIPKDVLPEEYGGYAGDI 196
            IH+IN   I   + +++KPF+ EKI+ RI +H  + +        D+LP EYGG    +
Sbjct: 177 GIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYGGEEFSM 236

Query: 197 KTINEQWMKKIESYRDWFKEQE 218
           + I ++W   I    D+     
Sbjct: 237 EDICQEWTNFIMKSEDYLSSIS 258

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316

 Score =  157 bits (400), Expect = 4e-47
 Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 36/203 (17%)

Query: 20  TPMPGLTPNGRRVIIMRASDLD-QVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFD 78
             +      GR V++    +   Q ++ D    ++    I +  L+ E   + G   + +
Sbjct: 145 GVLSSRDKYGRVVMLFNIENWQSQEITFDEI--LQAYCFILEKLLENEETQINGFCIIEN 202

Query: 79  AAIATPQNFAAHIAKFTPTLIKKFLICVQNF-AAHIAKFTPTLIKKFLICVQEAYPVKLK 137
                                       + F     A    + ++K +  +Q+++P   K
Sbjct: 203 ---------------------------FKGFTMQQAASLRTSDLRKMVDMLQDSFPAWFK 235

Query: 138 EIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA-DMESLYKSIPKDVLPEEYGGYAGDI 196
            IH I+      T  N+VKPF+K K+  R+ VH  D+   Y+ I +++LP ++GG     
Sbjct: 236 AIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGGTLPKY 295

Query: 197 KTINEQWMKKIESYRDWFKEQET 219
               +   +++  +    + + T
Sbjct: 296 D--GKAVAEQL--FGPQAQAENT 314

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403

 Score = 74.6 bits (183), Expect = 1e-15
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 112 HIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH- 170
           H+ K       +FL   +E YP  LK + ++ A  +     NL+KPF+ E  R +I+V  
Sbjct: 162 HLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLG 221

Query: 171 -ADMESLYKSIPKDVLPEEYGG 191
               E L K I  D +P EYGG
Sbjct: 222 ANWKEVLLKHISPDQVPVEYGG 243

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320

 Score = 66.0 bits (161), Expect = 8e-13
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 2/96 (2%)

Query: 119 TLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD--MESL 176
           + IK      Q  YP ++ + +II++     T+  +VKPF+     ++I +      + L
Sbjct: 204 SYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKEL 263

Query: 177 YKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRD 212
            K IP + LP +YGG +      ++ +   I  +RD
Sbjct: 264 LKQIPIENLPVKYGGTSVLHNPNDKFYYSDIGPWRD 299

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296

 Score = 64.0 bits (156), Expect = 3e-12
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 119 TLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD--MESL 176
           + +++     Q  YP ++ + +IINA     T   L KPF+     ++I +      + L
Sbjct: 189 SYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKEL 248

Query: 177 YKSIPKDVLPEEYGG 191
            K IP + LP ++GG
Sbjct: 249 LKQIPAENLPVKFGG 263

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	250
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	100.0
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	100.0
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	99.97
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	99.97
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	99.96
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	99.21
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	99.02

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=100.00  E-value=8.8e-40  Score=287.53  Aligned_cols=179  Identities=26%  Similarity=0.472  Sum_probs=168.9

Q ss_pred             eccceeeecCCCCCCCCCeEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhcCCCcccEEEEEecCCCCccccccccc
Q psy12552         13 SKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIA   92 (250)
Q Consensus        13 ~l~~g~~~~l~g~D~~Gr~Vi~~r~~~~d~~~~~~~~~~~r~~~~~~e~~l~~~~~~~~g~v~I~D~~g~s~~N~~~~~~   92 (250)
                      .++.|+..+++|+|++||||+++|++++|+ +.++..+++|+.++++|.++.+++.|+.|+++|+|++|+|+        
T Consensus        79 ~~~~g~~~~l~g~D~~GrpV~i~~~~~~d~-~~~~~~~~~r~~~~~~E~~~~~~~~~~~g~~~I~D~~g~s~--------  149 (262)
T 1r5l_A           79 LLKAGYHGVLRSRDPTGSKVLIYRIAHWDP-KVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQF--------  149 (262)
T ss_dssp             HHHTTCEEECSSCCTTCCEEEEEEGGGCCT-TTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCH--------
T ss_pred             HHHcCCccCCCCcCCCCCEEEEEeccccCc-ccCCHHHHHHHHHHHHHHHHhChhhcccceEEEEECCCCCH--------
Confidence            456788889999999999999999999999 88999999999999999988877767899999999999999        


Q ss_pred             cccchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEeCC
Q psy12552         93 KFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD  172 (250)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~~~  172 (250)
                                        +|+.+++++.+|+++.++|++||+|++++||||+|++|+.+|+++||||+++|++||+++++
T Consensus       150 ------------------~~~~~~~~~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t~~Ki~~~~~  211 (262)
T 1r5l_A          150 ------------------SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGN  211 (262)
T ss_dssp             ------------------HHHHHCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCS
T ss_pred             ------------------HHHhccCHHHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHHHhcCHHHHhheEEeCC
Confidence                              78888899999999999999999999999999999999999999999999999999999975


Q ss_pred             --hHHHHhhCCCCCCcccCCCCCCChhHHHHHHHHHHHHhHHHHHHhcc
Q psy12552        173 --MESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQET  219 (250)
Q Consensus       173 --~~~L~~~i~~~~LP~eyGG~~~~~~~l~~~w~~~l~~~~~~~~~~~~  219 (250)
                        .++|.++|| ++||++|||++++++++++.|.++++++++||.+.+.
T Consensus       212 ~~~~~L~~~i~-~~LP~~yGG~~~~~~~~~~~w~~~l~~~~~~~~~~~~  259 (262)
T 1r5l_A          212 NYKQSLLQHFP-DILPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISE  259 (262)
T ss_dssp             SCHHHHHHHST-TTSCGGGTCSSCCHHHHHHHHHHHHHHTHHHHHHTCC
T ss_pred             CcHHHHHHHhh-hhCcHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence              689999999 9999999999999999999999999999999998754

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*

Probab=100.00  E-value=4.5e-36  Score=273.15  Aligned_cols=168  Identities=20%  Similarity=0.339  Sum_probs=156.5

Q ss_pred             eccceeeecCCCCCCCCCeEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhcCCCcccEEEEEecCCCCccccccccc
Q psy12552         13 SKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIA   92 (250)
Q Consensus        13 ~l~~g~~~~l~g~D~~Gr~Vi~~r~~~~d~~~~~~~~~~~r~~~~~~e~~l~~~~~~~~g~v~I~D~~g~s~~N~~~~~~   92 (250)
                      .++.|+.+++||+|++||||+++|++++|+ +.++..+++|++++++|.++.++..++.|+++|+|++|+|+        
T Consensus       138 ~l~~g~~~~l~g~Dk~GrpVii~r~g~~d~-~~~~~~~~~r~~~~~lE~~l~~~~~~v~g~v~IiD~~g~sl--------  208 (316)
T 3hx3_A          138 TIEAGYPGVLSSRDKYGRVVMLFNIENWQS-QEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTM--------  208 (316)
T ss_dssp             HHHTTSSEECSSCCTTSCEEEEEECTTCCT-TTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCH--------
T ss_pred             HHHcCCccccCCCCCCCCEEEEEecccCCC-CCCCHHHHHHHHHHHHHHHHhcccCCcceEEEEEECCCCCH--------
Confidence            467899999999999999999999999999 99999999999999999998877677899999999999999        


Q ss_pred             cccchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEeC-
Q psy12552         93 KFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA-  171 (250)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~~-  171 (250)
                                        +|+.+++++.+|+++.++|++||+|++++||||+|++|+.+|+++||||+++|++||++|+ 
T Consensus       209 ------------------~~~~~~~~~~~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~KI~~~~~  270 (316)
T 3hx3_A          209 ------------------QQAASLRTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGD  270 (316)
T ss_dssp             ------------------HHHHHCCHHHHHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTTEEEEET
T ss_pred             ------------------HHhccCChHHHHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhheEEeCC
Confidence                              8888899999999999999999999999999999999999999999999999999999996 


Q ss_pred             ChHHHHhhCCCCCCcccCCCCCCChhHHHHHHHHHHHH
Q psy12552        172 DMESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIES  209 (250)
Q Consensus       172 ~~~~L~~~i~~~~LP~eyGG~~~~~~~l~~~w~~~l~~  209 (250)
                      +.++|.++||+++||++|||++++.+  ++.|.+.+..
T Consensus       271 ~~~~L~~~I~~~~LP~eyGG~~~~~d--~~~~~~~l~~  306 (316)
T 3hx3_A          271 DLSGFYQEIDENILPSDFGGTLPKYD--GKAVAEQLFG  306 (316)
T ss_dssp             CCHHHHHHSCGGGSBGGGTSSBCCCC--HHHHHHHHC-
T ss_pred             CHHHHHhhCCHhhCcHhhCCCCCCcC--hhHHHHHHcC
Confidence            48999999999999999999998666  7788877654

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=99.97  E-value=2.6e-31  Score=238.47  Aligned_cols=154  Identities=18%  Similarity=0.203  Sum_probs=135.3

Q ss_pred             ceeeecCCCCCCCCCeEEEEecCCCCcccC----CCHHHHHHHHHHHHHHHHhhc--------CCCcccEEEEEecCCCC
Q psy12552         16 VHNSTPMPGLTPNGRRVIIMRASDLDQVLS----ADAATGMKLVLMIGDIRLKEE--------SVGVAGDVYVFDAAIAT   83 (250)
Q Consensus        16 ~g~~~~l~g~D~~Gr~Vi~~r~~~~d~~~~----~~~~~~~r~~~~~~e~~l~~~--------~~~~~g~v~I~D~~g~s   83 (250)
                      ..+...++|+|++||||+++|++++|+ +.    .+..+++|++++.+|.++...        ..++.|+++|+|++|++
T Consensus       102 ~~~~~~~~g~Dk~GrpV~i~~~g~~d~-~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~s~~~g~~v~~~~~I~D~~g~s  180 (296)
T 1aua_A          102 KFYPQYYHKTDKDGRPVYFEELGAVNL-HEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGIS  180 (296)
T ss_dssp             GGSCCEEEEECTTSCEEEEECGGGCCH-HHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCC
T ss_pred             HhCCceecccCCCCCEEEEEeeccCCh-HHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEEEEEECCCCC
Confidence            334445689999999999999999987 43    688999999999999876531        23478999999999999


Q ss_pred             ccccccccccccchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccc
Q psy12552         84 PQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKI  163 (250)
Q Consensus        84 ~~N~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~  163 (250)
                      +                          +|+.++ ++.+|.++.++|++||+|++++||||+|++|+++|+++||||+++|
T Consensus       181 ~--------------------------~~~~~~-~~~~k~~~~~~q~~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t  233 (296)
T 1aua_A          181 I--------------------------SSAYSV-MSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVT  233 (296)
T ss_dssp             H--------------------------HHHHHH-HHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHH
T ss_pred             H--------------------------HHHHHH-HHHHHHHHHHHHHhHHHhhCeEEEECchHHHHHHHHHHHhhcCHhh
Confidence            9                          666555 7889999999999999999999999999999999999999999999


Q ss_pred             cCcEEEeCC--hHHHHhhCCCCCCcccCCCCCCChh
Q psy12552        164 RNRIVVHAD--MESLYKSIPKDVLPEEYGGYAGDIK  197 (250)
Q Consensus       164 ~~ri~~~~~--~~~L~~~i~~~~LP~eyGG~~~~~~  197 (250)
                      ++||+|+++  .++|.++||+++||++|||+++...
T Consensus       234 ~~KI~~~~~~~~~~L~~~i~~~~LP~~yGG~~~~~~  269 (296)
T 1aua_A          234 VSKIFILGSSYQKELLKQIPAENLPVKFGGKSEVDE  269 (296)
T ss_dssp             HTTEEECCSCCHHHHTTTSCSSSSBGGGTSCBCCCG
T ss_pred             cceEEEeCcccHHHHHhhCCHhhCcHHhCCCCCCCC
Confidence            999999976  6889999999999999999996543

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*

Probab=99.97  E-value=9.4e-31  Score=244.46  Aligned_cols=148  Identities=28%  Similarity=0.374  Sum_probs=135.3

Q ss_pred             CCCCCCCCCeEEEEecCCCCccc----CCCHHHHHHHHHHHHHHHHhhcCC-------CcccEEEEEecCCCCccccccc
Q psy12552         22 MPGLTPNGRRVIIMRASDLDQVL----SADAATGMKLVLMIGDIRLKEESV-------GVAGDVYVFDAAIATPQNFAAH   90 (250)
Q Consensus        22 l~g~D~~Gr~Vi~~r~~~~d~~~----~~~~~~~~r~~~~~~e~~l~~~~~-------~~~g~v~I~D~~g~s~~N~~~~   90 (250)
                      ++|+|++||||+++|++++|+ +    ..+..+++|++++++|.++.+...       ++.|+++|+|++|+++      
T Consensus        88 ~~g~Dk~GrpV~~~~~g~~d~-~~l~~~~~~~~~~r~~~~~~E~~~~~~~~~s~~~g~~v~~~~~I~D~~g~sl------  160 (403)
T 1olm_A           88 MCGYDLDGCPVWYDIIGPLDA-KGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGL------  160 (403)
T ss_dssp             EEEECTTSCEEEEEECTTCCH-HHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCG------
T ss_pred             eeccCCCcCEEEEEecCCCCh-HHhhccCCHHHHHHHHHHHHHHHHHHHHhhHHhhCCcccceEEEEECCCCCH------
Confidence            468999999999999999998 5    589999999999999998876542       3789999999999999      


Q ss_pred             cccccchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEe
Q psy12552         91 IAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVH  170 (250)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~  170 (250)
                                          +|+.+..++.+|+++.++|++||+|++++||||+|++|+++|+++||||+++|++||+|+
T Consensus       161 --------------------~~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~  220 (403)
T 1olm_A          161 --------------------KHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVL  220 (403)
T ss_dssp             --------------------GGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEEC
T ss_pred             --------------------HHHhhHHHHHHHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEE
Confidence                                666666678899999999999999999999999999999999999999999999999999


Q ss_pred             CC--hHHHHhhCCCCCCcccCCCCCCCh
Q psy12552        171 AD--MESLYKSIPKDVLPEEYGGYAGDI  196 (250)
Q Consensus       171 ~~--~~~L~~~i~~~~LP~eyGG~~~~~  196 (250)
                      ++  .++|.++||+++||++|||++++.
T Consensus       221 ~~~~~~~L~~~I~~~~LP~~yGG~~~~~  248 (403)
T 1olm_A          221 GANWKEVLLKHISPDQVPVEYGGTMTDP  248 (403)
T ss_dssp             CTTHHHHHTTTSCGGGSBGGGTSSBCCT
T ss_pred             ChhHHHHHHhhcChhhCchhhCCCcCCC
Confidence            75  678999999999999999999753

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=99.96  E-value=1.1e-29  Score=231.77  Aligned_cols=152  Identities=17%  Similarity=0.218  Sum_probs=132.9

Q ss_pred             eeeecCCCCCCCCCeEEEEecCCCCcccC----CCHHHHHHHHHHHHHHHHhhc--------CCCcccEEEEEecCCCCc
Q psy12552         17 HNSTPMPGLTPNGRRVIIMRASDLDQVLS----ADAATGMKLVLMIGDIRLKEE--------SVGVAGDVYVFDAAIATP   84 (250)
Q Consensus        17 g~~~~l~g~D~~Gr~Vi~~r~~~~d~~~~----~~~~~~~r~~~~~~e~~l~~~--------~~~~~g~v~I~D~~g~s~   84 (250)
                      .+...++|+|++||||+++|+|++|+ +.    .+..+++|++++.+|.+++..        ...+.++++|+|++|+++
T Consensus       118 ~~~~~~~g~Dk~GRpV~i~r~g~~d~-~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~~~~IiD~~g~sl  196 (320)
T 3q8g_A          118 MYPQYYHHVDKDGRPLYFAELGGINL-KKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISL  196 (320)
T ss_dssp             TSCEEEEEECTTCCEEEEEECTTCCH-HHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCH
T ss_pred             hCCceecCCCCCcCEEEEEeccccCH-HHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcceeEEEEECCCCCH
Confidence            34456689999999999999999998 54    488899999999999876421        112577899999999999


Q ss_pred             cccccccccccchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhccccccc
Q psy12552         85 QNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIR  164 (250)
Q Consensus        85 ~N~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~  164 (250)
                                                +|+.++ ++.+|+++.++|++||+|++++||||+|++|+.+|+++||||+++|+
T Consensus       197 --------------------------~~~~~~-~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~  249 (320)
T 3q8g_A          197 --------------------------SNAYHV-LSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTV  249 (320)
T ss_dssp             --------------------------HHHHHT-HHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHH
T ss_pred             --------------------------HHHHHH-HHHHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHh
Confidence                                      565554 67899999999999999999999999999999999999999999999


Q ss_pred             CcEEEeCC--hHHHHhhCCCCCCcccCCCCCCCh
Q psy12552        165 NRIVVHAD--MESLYKSIPKDVLPEEYGGYAGDI  196 (250)
Q Consensus       165 ~ri~~~~~--~~~L~~~i~~~~LP~eyGG~~~~~  196 (250)
                      +||+|+++  .++|.++||+++||++|||+++..
T Consensus       250 ~KI~~~~~~~~~~L~~~i~~~~LP~~yGG~~~~~  283 (320)
T 3q8g_A          250 SKIFILGSSYKKELLKQIPIENLPVKYGGTSVLH  283 (320)
T ss_dssp             HTEEECCTTHHHHHHHHSCGGGSBGGGTSCBCCS
T ss_pred             hhEEEeCCCcHHHHHhhCChhhCChhhCCCCCCC
Confidence            99999976  689999999999999999999653

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*

Probab=99.21  E-value=9.8e-12  Score=109.94  Aligned_cols=133  Identities=14%  Similarity=0.112  Sum_probs=108.4

Q ss_pred             eeecCCCCCCCCCeEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhcCCCcccEEEEEecCCCCccccccccccccch
Q psy12552         18 NSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHIAKFTPT   97 (250)
Q Consensus        18 ~~~~l~g~D~~Gr~Vi~~r~~~~d~~~~~~~~~~~r~~~~~~e~~l~~~~~~~~g~v~I~D~~g~s~~N~~~~~~~~~~~   97 (250)
                      .+++-.|.|++||||+++.++++++ ...+.+.++.+.+..++...      ...+.+|+|+.+++..|           
T Consensus        11 ~ify~~G~d~dGrpViv~~~~~l~~-~~~D~e~Ll~~vl~tl~~~~------~~~y~lV~d~T~~~~~n-----------   72 (256)
T 3pg7_A           11 SIFYQAGTSKAGNPIFYYVARRFKT-GQINGDLLIYHVLLTLKPYY------AKPYEIVVDLTHTGPSN-----------   72 (256)
T ss_dssp             TSEEEEEECTTSCEEEEEEGGGCCB-TTBCHHHHHHHHHHHHTTTT------TSCEEEEEECTTCCGGG-----------
T ss_pred             CCEEEcCcCCCCCEEEEEEeecCCC-CCCCHHHHHHHHHHHHHHhc------CCCeEEEEECCCCCccc-----------
Confidence            3444458999999999999999988 77887777766666665332      35689999999999854           


Q ss_pred             hhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHH-HhhcccccccCcEEEeCChHHH
Q psy12552         98 LIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINL-VKPFIKEKIRNRIVVHADMESL  176 (250)
Q Consensus        98 ~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~l-vk~fL~~k~~~ri~~~~~~~~L  176 (250)
                                       +.+.+.++++.+.+-..|...++++||+|+++++...+.. .+++.+.+..+++++.++.++|
T Consensus        73 -----------------~p~~~wl~~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv~sl~eL  135 (256)
T 3pg7_A           73 -----------------RFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCPGKL  135 (256)
T ss_dssp             -----------------CCCHHHHHHTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEESSTTGG
T ss_pred             -----------------CCcHHHHHHHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEECCHHHH
Confidence                             2456678888888888999999999999999999976665 5667777888999999999999


Q ss_pred             HhhCCCCCC
Q psy12552        177 YKSIPKDVL  185 (250)
Q Consensus       177 ~~~i~~~~L  185 (250)
                      .++|+.++|
T Consensus       136 ~~~i~~~~L  144 (256)
T 3pg7_A          136 AEHIEHEQQ  144 (256)
T ss_dssp             GGTSCGGGC
T ss_pred             HhhcCHHHc
Confidence            999987766

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	250
d1r5la2	185	c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot	1e-36
d1olma3	199	c.13.1.1 (A:76-274) Supernatant protein factor (SP	5e-18
d1auaa2	203	c.13.1.1 (A:97-299) C-terminal domain of phosphati	5e-16

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 1e-36
 Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 30/199 (15%)

Query: 20  TPMPGLTPNGRRVIIMRASDLD-QVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFD 78
             +    P G +V+I R +  D +V +A      ++ L+  ++ ++E      G   +FD
Sbjct: 12  GVLRSRDPTGSKVLIYRIAHWDPKVFTAYDV--FRVSLITSELIVQEVETQRNGIKAIFD 69

Query: 79  AAIATPQNFAAHIAKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKE 138
                                           +H  + TP++ KK    + +++P+K++ 
Sbjct: 70  LEGWQF--------------------------SHAFQITPSVAKKIAAVLTDSFPLKVRG 103

Query: 139 IHIINASGIVDTIINLVKPFIKEKIRNRIVVHADM-ESLYKSIPKDVLPEEYGGYAGDIK 197
           IH+IN   I   + +++KPF+ EKI+ RI +H +  +        D+LP EYGG    ++
Sbjct: 104 IHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYGGEEFSME 163

Query: 198 TINEQWMKKIESYRDWFKE 216
            I ++W   I    D+   
Sbjct: 164 DICQEWTNFIMKSEDYLSS 182

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.4 bits (190), Expect = 5e-18
 Identities = 41/177 (23%), Positives = 62/177 (35%), Gaps = 20/177 (11%)

Query: 22  MPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAI 81
           M G   +G  V       LD      +A+   L+     +R  E          +     
Sbjct: 13  MCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTK--MRECE---------LLLQECA 61

Query: 82  ATPQNFAAHIAKFTPTLIKKFLICVQNF-AAHIAKFTPTLIKKFLICVQEAYPVKLKEIH 140
                    +   T       +   +     H+ K       +FL   +E YP  LK + 
Sbjct: 62  HQTTKLGRKVETIT------IIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLF 115

Query: 141 IINASGIVDTIINLVKPFIKEKIRNRIVVH--ADMESLYKSIPKDVLPEEYGGYAGD 195
           ++ A  +     NL+KPF+ E  R +I+V      E L K I  D +P EYGG   D
Sbjct: 116 VVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGGTMTD 172

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.1 bits (176), Expect = 5e-16
 Identities = 28/174 (16%), Positives = 64/174 (36%), Gaps = 22/174 (12%)

Query: 22  MPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAI 81
                 +GR V       ++        +  +++  +               V+ +++ +
Sbjct: 15  YHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNL---------------VWEYESVV 59

Query: 82  ATPQNFAAHIAKFTPTLIKKFLICV--QNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEI 139
              Q      ++    L++     +  +  +   A    + +++     Q  YP ++ + 
Sbjct: 60  ---QYRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKF 116

Query: 140 HIINASGIVDTIINLVKPFIKEKIRNRIVVHAD--MESLYKSIPKDVLPEEYGG 191
           +IINA     T   L KPF+     ++I +      + L K IP + LP ++GG
Sbjct: 117 YIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGG 170

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	250
d1r5la2	185	Alpha-tocopherol transfer protein {Human (Homo sap	100.0
d1olma3	199	Supernatant protein factor (SPF), middle domain {H	100.0
d1auaa2	203	C-terminal domain of phosphatidylinositol transfer	99.97

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-43  Score=294.51  Aligned_cols=181  Identities=24%  Similarity=0.418  Sum_probs=172.4

Q ss_pred             eeccceeeecCCCCCCCCCeEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhcCCCcccEEEEEecCCCCcccccccc
Q psy12552         12 ESKSVHNSTPMPGLTPNGRRVIIMRASDLDQVLSADAATGMKLVLMIGDIRLKEESVGVAGDVYVFDAAIATPQNFAAHI   91 (250)
Q Consensus        12 ~~l~~g~~~~l~g~D~~Gr~Vi~~r~~~~d~~~~~~~~~~~r~~~~~~e~~l~~~~~~~~g~v~I~D~~g~s~~N~~~~~   91 (250)
                      +++++|+...|||+|++||||+++|++++|| +.++..+++|+.++.+|.++.+++.|++|+++|+|++|+|+       
T Consensus         4 ~~l~~g~~~~lp~rD~~Gr~v~~~r~~~~d~-~~~~~~~~~r~~~~~~e~~~~~~~~~~~g~~~I~D~~g~s~-------   75 (185)
T d1r5la2           4 GLLKAGYHGVLRSRDPTGSKVLIYRIAHWDP-KVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQF-------   75 (185)
T ss_dssp             HHHHTTCEEECSSCCTTCCEEEEEEGGGCCT-TTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCH-------
T ss_pred             HHHHcCCceecCCCCcCcCEEEEEEcccCCC-CCCCHHHHHHHHHHHHHHHHhccccCCceEEEEEECCCCCH-------
Confidence            4678999999999999999999999999999 99999999999999999999888888999999999999999       


Q ss_pred             ccccchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEeC
Q psy12552         92 AKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA  171 (250)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~~  171 (250)
                                         +|+.+++++.+++++.++|++||+|++++|+||+|++++++|+++||||++++++||++|+
T Consensus        76 -------------------~~~~~~~~~~~~~~~~~~q~~yP~rl~~i~ivn~P~~~~~~~~~vk~fl~~k~~~Ki~~~~  136 (185)
T d1r5la2          76 -------------------SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHG  136 (185)
T ss_dssp             -------------------HHHHHCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECC
T ss_pred             -------------------HHhhhccHHHHHHHHHHHHhhCchhhheeEEEcCCHHHHHHHHHHHHhccHHHHhheEEec
Confidence                               8888899999999999999999999999999999999999999999999999999999996


Q ss_pred             C-hHHHHhhCCCCCCcccCCCCCCChhHHHHHHHHHHHHhHHHHHHhcc
Q psy12552        172 D-MESLYKSIPKDVLPEEYGGYAGDIKTINEQWMKKIESYRDWFKEQET  219 (250)
Q Consensus       172 ~-~~~L~~~i~~~~LP~eyGG~~~~~~~l~~~w~~~l~~~~~~~~~~~~  219 (250)
                      + .+++..++++++||++|||+++++++.+++|.+++.+++|||++.++
T Consensus       137 ~~~~~~~~~~~~~~LP~~~GG~~~~~~~~~~~~~~~~~~~~d~~~~~~~  185 (185)
T d1r5la2         137 NNYKQSLLQHFPDILPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISE  185 (185)
T ss_dssp             SSCHHHHHHHSTTTSCGGGTCSSCCHHHHHHHHHHHHHHTHHHHHHTCC
T ss_pred             cchHHHHhhcCHHhCCHhcCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Confidence            5 77888888999999999999999999999999999999999998763

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-33  Score=238.34  Aligned_cols=148  Identities=28%  Similarity=0.377  Sum_probs=133.5

Q ss_pred             CCCCCCCCeEEEEecCCCCc---ccCCCHHHHHHHHHHHHHHHHhhcC-------CCcccEEEEEecCCCCccccccccc
Q psy12552         23 PGLTPNGRRVIIMRASDLDQ---VLSADAATGMKLVLMIGDIRLKEES-------VGVAGDVYVFDAAIATPQNFAAHIA   92 (250)
Q Consensus        23 ~g~D~~Gr~Vi~~r~~~~d~---~~~~~~~~~~r~~~~~~e~~l~~~~-------~~~~g~v~I~D~~g~s~~N~~~~~~   92 (250)
                      +|+|++||||+++|+|++|+   +...+.++++|+.++.+|..++...       .++.|+++|+|++|+|+        
T Consensus        14 ~G~Dk~Grpv~~~r~g~~d~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~v~~~~~I~Dl~g~s~--------   85 (199)
T d1olma3          14 CGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGL--------   85 (199)
T ss_dssp             EEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCG--------
T ss_pred             ccCCCCCCEEEEEecccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccceEEEEEECCCCch--------
Confidence            79999999999999999998   2356889999999999998876421       34689999999999999        


Q ss_pred             cccchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEeCC
Q psy12552         93 KFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHAD  172 (250)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~~~  172 (250)
                                        +|+.+..++.+++++.++|++||+|++++||||+|++|+++|+++||||+++|++||+++++
T Consensus        86 ------------------~~~~~~~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~  147 (199)
T d1olma3          86 ------------------KHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA  147 (199)
T ss_dssp             ------------------GGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCT
T ss_pred             ------------------hhhccccHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCC
Confidence                              66766678899999999999999999999999999999999999999999999999999975


Q ss_pred             --hHHHHhhCCCCCCcccCCCCCCCh
Q psy12552        173 --MESLYKSIPKDVLPEEYGGYAGDI  196 (250)
Q Consensus       173 --~~~L~~~i~~~~LP~eyGG~~~~~  196 (250)
                        .++|.++|++++||++|||+++..
T Consensus       148 ~~~~~L~~~i~~~~lP~~yGGt~~~~  173 (199)
T d1olma3         148 NWKEVLLKHISPDQVPVEYGGTMTDP  173 (199)
T ss_dssp             THHHHHTTTSCGGGSBGGGTSSBCCT
T ss_pred             CCHHHHHHhCCHhhCCHHhCCCCCCC
Confidence              688999999999999999999653

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=9.4e-31  Score=220.87  Aligned_cols=146  Identities=18%  Similarity=0.225  Sum_probs=129.3

Q ss_pred             CCCCCCCCeEEEEecCCCCc---ccCCCHHHHHHHHHHHHHHHHhh--------cCCCcccEEEEEecCCCCcccccccc
Q psy12552         23 PGLTPNGRRVIIMRASDLDQ---VLSADAATGMKLVLMIGDIRLKE--------ESVGVAGDVYVFDAAIATPQNFAAHI   91 (250)
Q Consensus        23 ~g~D~~Gr~Vi~~r~~~~d~---~~~~~~~~~~r~~~~~~e~~l~~--------~~~~~~g~v~I~D~~g~s~~N~~~~~   91 (250)
                      +|+|++||||+++|+|++|+   ....+.++++|++++.+|.+++.        ...+++++++|+|++|+++       
T Consensus        16 ~G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g~s~-------   88 (203)
T d1auaa2          16 HKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISI-------   88 (203)
T ss_dssp             EEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCH-------
T ss_pred             CCCCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceEEEEEECCCCCh-------
Confidence            79999999999999999998   23568999999999999987642        1234789999999999999       


Q ss_pred             ccccchhhhHHHHhhhhhhhhhcccCHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcccccccCcEEEeC
Q psy12552         92 AKFTPTLIKKFLICVQNFAAHIAKFTPTLIKKFLICVQEAYPVKLKEIHIINASGIVDTIINLVKPFIKEKIRNRIVVHA  171 (250)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~q~~yP~rl~~i~iiN~P~~~~~~~~lvk~fL~~k~~~ri~~~~  171 (250)
                                         +++... ...+++++.++|++||+|+++++|||+|++++++|+++|+||+++|++||++++
T Consensus        89 -------------------~~~~~~-~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~  148 (203)
T d1auaa2          89 -------------------SSAYSV-MSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILG  148 (203)
T ss_dssp             -------------------HHHHHH-HHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECC
T ss_pred             -------------------HHhhhH-HHHHHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecC
Confidence                               555432 457899999999999999999999999999999999999999999999999996


Q ss_pred             C--hHHHHhhCCCCCCcccCCCCCCC
Q psy12552        172 D--MESLYKSIPKDVLPEEYGGYAGD  195 (250)
Q Consensus       172 ~--~~~L~~~i~~~~LP~eyGG~~~~  195 (250)
                      +  .++|.++|++++||++|||++..
T Consensus       149 ~~~~~~L~~~id~~~LP~~~GG~~~~  174 (203)
T d1auaa2         149 SSYQKELLKQIPAENLPVKFGGKSEV  174 (203)
T ss_dssp             SCCHHHHTTTSCSSSSBGGGTSCBCC
T ss_pred             CCCHHHHHhhCCHhhChHHhCCCCcC
Confidence            5  89999999999999999999853