Psyllid ID: psy12585

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
MPMRFKCGLFINAPPGLETLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAVD
Secondary Structure (PSIPRED)
cccccccHHHccccHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHHccHHHHHHHHcccccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHcHHHHHcccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHccHHHHHHHHHHHccccEcEEEEEcccHHHHHHHHHHHHHHHHHHHHHEEEccccHHHHHHHccHHHccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccccHHHccccccccEEEccc
Coil and Loop (DISEMBL)
mpmrfkcglfinappgleTLVYIKIMPmrfkcglfinappgLETLVYIVKQFlpdklqkrvfvssgdhtslyehiprellpkdyggddislEEMTENWRKELLAHRdwfldptnrrsdeskrpkgssfnpkdrfstqgsfktlavd
Flexible Loop (DISEMBL)
MPMRFKCGlfinappgLETLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSsgdhtslyehiprellpkdYGGDDISLEEMTENWRKELLAhrdwfldptnrrsdeskrpkgssfnpkdrfstqgsfktlavd
Low Complexity Region (SEG)
MPMRFKCGLFINAPPGLETLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAVD
Disordered region (IsUnstruct)
****FKCGLFINAPPGLETLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFL************************************
Disordered Region (DISOPRED)
***RFK*GLFINAPPGLETLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDES*R*******PKDRFSTQGSFKTLAVD
Disordered Region (DISEMBL)
MPMRFKCGLFINAPPGLETLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFLDPTN***************PKDRFSTQGSFKTLAVD
Disordered Region (DISPRO)
**MRFKCGLFINAPPGLETLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAV*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPMRFKCGLFINAPPGLETLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAVD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	146	2.2.26 [Sep-21-2011]
Q5RFR0	342	Alpha-tocopherol transfer	yes	N/A	0.561	0.239	0.369	1e-08
Q9BTX7	342	Alpha-tocopherol transfer	yes	N/A	0.561	0.239	0.369	1e-08
Q9D3D0	343	Alpha-tocopherol transfer	yes	N/A	0.561	0.239	0.357	3e-08
P12271	317	Retinaldehyde-binding pro	no	N/A	0.410	0.189	0.433	2e-06
P10123	317	Retinaldehyde-binding pro	no	N/A	0.410	0.189	0.433	4e-06
Q8BWP5	278	Alpha-tocopherol transfer	no	N/A	0.561	0.294	0.25	7e-06
P49638	278	Alpha-tocopherol transfer	no	N/A	0.561	0.294	0.261	9e-06
Q9Z275	317	Retinaldehyde-binding pro	no	N/A	0.410	0.189	0.416	9e-06
P41034	278	Alpha-tocopherol transfer	no	N/A	0.561	0.294	0.261	1e-05
Q5RCA6	354	Clavesin-1 OS=Pongo abeli	no	N/A	0.410	0.169	0.383	2e-05

>sp|Q5RFR0|TTPAL_PONAB Alpha-tocopherol transfer protein-like OS=Pongo abelii GN=TTPAL PE=2 SV=1

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P+R K    +N P   + +  I+K FL +K+  R F+   D  SL+ ++PR +LPK+YGG
Sbjct: 217 PIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGG 276

Query: 87  DDISLEEMTENWRKELLAHRDWFL 110
               L+  T  W   LLA  D F+
Sbjct: 277 TAGELD--TATWNAVLLASEDDFV 298

May act as a protein that binds a hydrophobic ligand.
Pongo abelii (taxid: 9601)

>sp|Q9BTX7|TTPAL_HUMAN Alpha-tocopherol transfer protein-like OS=Homo sapiens GN=TTPAL PE=2 SV=2

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P+R K    +N P   + +  I+K FL +K+  R F+   D  SL+ ++PR +LPK+YGG
Sbjct: 217 PIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGG 276

Query: 87  DDISLEEMTENWRKELLAHRDWFL 110
               L+  T  W   LLA  D F+
Sbjct: 277 TAGELD--TATWNAVLLASEDDFV 298

May act as a protein that binds a hydrophobic ligand.

Homo sapiens (taxid: 9606)

>sp|Q9D3D0|TTPAL_MOUSE Alpha-tocopherol transfer protein-like OS=Mus musculus GN=Ttpal PE=2 SV=3

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P+R K    +N P   + +  I+K FL +K+  R F+   D  SL+ ++PR +LPK+YGG
Sbjct: 218 PIRIKAVHIVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRNILPKEYGG 277

Query: 87  DDISLEEMTENWRKELLAHRDWFL 110
               L+  T +W   LLA  + F+
Sbjct: 278 TAGELD--TASWNAVLLASEEDFV 299

May act as a protein that binds a hydrophobic ligand.

Mus musculus (taxid: 10090)

>sp|P12271|RLBP1_HUMAN Retinaldehyde-binding protein 1 OS=Homo sapiens GN=RLBP1 PE=1 SV=2

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 33/60 (55%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P RFK   FI+ P    T   +VK FL  KL +RVFV   D +  Y+ I   +LP D+GG
Sbjct: 232 PARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGG 291

Soluble retinoid carrier essential the proper function of both rod and cone photoreceptors. Participates in the regeneration of active 11-cis-retinol and 11-cis-retinaldehyde, from the inactive 11-trans products of the rhodopsin photocycle and in the de novo synthesis of these retinoids from 11-trans metabolic precursors. The cycling of retinoids between photoreceptor and adjacent pigment epithelium cells is known as the 'visual cycle'.

Homo sapiens (taxid: 9606)

>sp|P10123|RLBP1_BOVIN Retinaldehyde-binding protein 1 OS=Bos taurus GN=RLBP1 PE=1 SV=4

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 33/60 (55%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P RFK   FI  P    T   +VK FL  KL +RVFV   D +S Y+    ++LP D+GG
Sbjct: 232 PARFKAIHFIYQPWYFTTTYNVVKPFLKSKLLQRVFVHGEDLSSFYQEFDEDILPSDFGG 291

Soluble retinoid carrier essential the proper function of both rod and cone photoreceptors. Participates in the regeneration of active 11-cis-retinol and 11-cis-retinaldehyde, from the inactive 11-trans products of the rhodopsin photocycle and in the de novo synthesis of these retinoids from 11-trans metabolic precursors. The cycling of retinoids between photoreceptor and adjacent pigment epithelium cells is known as the 'visual cycle'.

Bos taurus (taxid: 9913)

>sp|Q8BWP5|TTPA_MOUSE Alpha-tocopherol transfer protein OS=Mus musculus GN=Ttpa PE=2 SV=1

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDH-TSLYEHIPRELLPKDYG 85
           P++ +    IN P     +  ++K FL +K++ R+ +   ++ +S+ +H P ++LP++YG
Sbjct: 188 PLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKDRIHLHGNNYKSSMLQHFP-DILPREYG 246

Query: 86  GDDISLEEMTENWRKELLAHRDWF 109
           G + S+E++ + W   ++   D+ 
Sbjct: 247 GKEFSMEDICQEWTNFIMKSEDYL 270

Binds alpha-tocopherol and enhances its transfer between separate membranes.

Mus musculus (taxid: 10090)

>sp|P49638|TTPA_HUMAN Alpha-tocopherol transfer protein OS=Homo sapiens GN=TTPA PE=1 SV=1

 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDH-TSLYEHIPRELLPKDYG 85
           P++ +    IN P     +  ++K FL +K+++R+ +   ++  SL +H P ++LP +YG
Sbjct: 188 PLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPLEYG 246

Query: 86  GDDISLEEMTENWRKELLAHRDWF 109
           G++ S+E++ + W   ++   D+ 
Sbjct: 247 GEEFSMEDICQEWTNFIMKSEDYL 270

Binds alpha-tocopherol and enhances its transfer between separate membranes.

Homo sapiens (taxid: 9606)

>sp|Q9Z275|RLBP1_MOUSE Retinaldehyde-binding protein 1 OS=Mus musculus GN=Rlbp1 PE=2 SV=3

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 33/60 (55%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P RFK   FI+ P    T   +VK FL +KL +RVFV   D    ++ I   +LP D+GG
Sbjct: 232 PARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENILPADFGG 291

Soluble retinoid carrier essential the proper function of both rod and cone photoreceptors. Participates in the regeneration of active 11-cis-retinol and 11-cis-retinaldehyde, from the inactive 11-trans products of the rhodopsin photocycle and in the de novo synthesis of these retinoids from 11-trans metabolic precursors. The cycling of retinoids between photoreceptor and adjacent pigment epithelium cells is known as the 'visual cycle'.

Mus musculus (taxid: 10090)

>sp|P41034|TTPA_RAT Alpha-tocopherol transfer protein OS=Rattus norvegicus GN=Ttpa PE=1 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDH-TSLYEHIPRELLPKDYG 85
           P++ +    IN P     +  ++K FL +K++ R+ +   ++ +SL +H P ++LP +YG
Sbjct: 188 PLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKGRIHLHGNNYKSSLLQHFP-DILPLEYG 246

Query: 86  GDDISLEEMTENWRKELLAHRDWF 109
           G++ S+E++ + W   ++   D+ 
Sbjct: 247 GNESSMEDICQEWTNFIMKSEDYL 270

Binds alpha-tocopherol and enhances its transfer between separate membranes.

Rattus norvegicus (taxid: 10116)

>sp|Q5RCA6|CLVS1_PONAB Clavesin-1 OS=Pongo abelii GN=CLVS1 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P RF    F+N P  +  L  ++K FL DK +KR+F+   +  SL++ I  E LP ++GG
Sbjct: 214 PARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGG 273

Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
357630269	310	hypothetical protein KGM_17942 [Danaus p	0.910	0.429	0.360	2e-20
157118369	310	hypothetical protein AaeL_AAEL008275 [Ae	0.869	0.409	0.390	3e-19
158300450	311	AGAP012165-PA [Anopheles gambiae str. PE	0.815	0.382	0.4	6e-19
170059399	440	conserved hypothetical protein [Culex qu	0.869	0.288	0.359	4e-18
321455327	123	hypothetical protein DAPPUDRAFT_64631 [D	0.815	0.967	0.4	8e-18
242009791	307	protein C20orf121, putative [Pediculus h	0.815	0.387	0.366	9e-18
357631615	312	cellular retinaldehyde-binding protein [	0.808	0.378	0.391	5e-17
389608409	312	alpha tocopherol transfer protein [Papil	0.808	0.378	0.358	2e-16
357631616	310	cellular retinaldehyde-binding protein [	0.808	0.380	0.358	2e-16
321445732	319	hypothetical protein DAPPUDRAFT_307236 [	0.965	0.442	0.358	2e-16

>gi|357630269|gb|EHJ78511.1| hypothetical protein KGM_17942 [Danaus plexippus]

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 3/136 (2%)

Query: 13  APPGLETLVYI--KIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTS 70
            P   + L+++  K +P+R K    I  PPG E    + K F+ DK+++R  +   +H  
Sbjct: 176 TPTIAKKLIFLIEKALPVRMKSSHVIYIPPGFEAAYNLFKAFVADKIKQRFHLYGQNHDG 235

Query: 71  LYEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNP 130
           +Y+ +PR +LPK+YGGDD SL+E+ + W++++ ++RDWFL     RS+E+ RP  S    
Sbjct: 236 MYDALPRSILPKEYGGDDGSLQELIDFWKRKVESYRDWFLKEETERSNEALRPDKSK-TT 294

Query: 131 KDRFSTQGSFKTLAVD 146
            + F  +GSF+ L +D
Sbjct: 295 SNLFGVEGSFRQLDID 310

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118369|ref|XP_001659081.1| hypothetical protein AaeL_AAEL008275 [Aedes aegypti] gi|108875736|gb|EAT39961.1| AAEL008275-PA [Aedes aegypti]

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 1/128 (0%)

Query: 19  TLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRE 78
           T++  +  P+R K   +IN P G E +  + K F+ +K + R++V   D  SLY H+P+ 
Sbjct: 184 TMMSQEASPLRQKGFHYINTPSGFEMVFNMFKSFMSEKNKSRLYVHGHDLESLYRHVPKR 243

Query: 79  LLPKDYGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQG 138
           LLP +YGGD   LE +  NW K+++++RD+FL+     +DE KRP G   N +  F  +G
Sbjct: 244 LLPAEYGGDAGPLECIITNWEKKIVSYRDYFLEEDQYGTDEKKRP-GRPKNAESLFGVEG 302

Query: 139 SFKTLAVD 146
           SF+ L VD
Sbjct: 303 SFRQLQVD 310

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158300450|ref|XP_320369.4| AGAP012165-PA [Anopheles gambiae str. PEST] gi|157013165|gb|EAA43295.4| AGAP012165-PA [Anopheles gambiae str. PEST]

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 76/120 (63%), Gaps = 1/120 (0%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P+R K   +IN P G ET+  + K F+ +K + R++V   +   LY+HIP+ LLPK+YGG
Sbjct: 193 PLRQKGFHYINTPTGFETVFNMFKSFMSEKNRSRLYVHGSNLEKLYQHIPKRLLPKEYGG 252

Query: 87  DDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAVD 146
           +  SL+++T NW K++L++R++FL+     +DE KR  G +      F  +GSF+ L VD
Sbjct: 253 EGDSLKDITANWEKKILSYREYFLEEDQYGTDERKRV-GKAKTADSLFGMEGSFRRLEVD 311

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170059399|ref|XP_001865347.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167878213|gb|EDS41596.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 78/128 (60%), Gaps = 1/128 (0%)

Query: 19  TLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRE 78
           T++  +  P+R K   +IN P G E +  + K F+ +K + R++V   D  SLY+H+PR 
Sbjct: 314 TMMSQEASPLRQKGFHYINTPSGFEVVFNMFKNFMSEKNKSRLYVHGHDLESLYKHVPRR 373

Query: 79  LLPKDYGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQG 138
           LLP +YGG+   ++ + + W ++++++RD+FL+     +DE KRP G   N +  F  +G
Sbjct: 374 LLPMEYGGEAGPIQNIIDKWEQKMVSYRDYFLEEDQYGTDEKKRP-GRPKNAQTLFGVEG 432

Query: 139 SFKTLAVD 146
           SF+ L VD
Sbjct: 433 SFRKLEVD 440

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321455327|gb|EFX66463.1| hypothetical protein DAPPUDRAFT_64631 [Daphnia pulex]

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 1/120 (0%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P+R K   +I++P        +V+ F+ DK+++RV +   D  SLY+ IP+E+LPKDYGG
Sbjct: 5   PIRPKTMNYIHSPSVFNMFNNLVQSFMKDKMKQRVHMHGDDMESLYKEIPKEILPKDYGG 64

Query: 87  DDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAVD 146
           D++S+ E+T  W+K+    RD+ +  +  RSDESKR  G      + F  +GSF+ L VD
Sbjct: 65  DNMSIAELTAYWKKKCEDRRDFLIATSKMRSDESKRS-GKPKTSDELFGIEGSFRKLNVD 123

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242009791|ref|XP_002425666.1| protein C20orf121, putative [Pediculus humanus corporis] gi|212509559|gb|EEB12928.1| protein C20orf121, putative [Pediculus humanus corporis]

 Score = 94.7 bits (234), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 76/120 (63%), Gaps = 1/120 (0%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P++ K    +N  P ++T+V  VK FL +K++ R+F  +  + SLY+++P+E+LP++YGG
Sbjct: 189 PVKLKEVHVVNVSPLVDTIVNFVKPFLKEKIKNRIFFHADGYESLYKYVPKEILPEEYGG 248

Query: 87  DDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAVD 146
               +  + E W K+L +++DWF+   + ++DESKRP G      D F  +GSF+ L +D
Sbjct: 249 FAGPIGAINEQWLKKLESYKDWFIQQEDVKADESKRP-GKPKTHDDLFGVEGSFRKLVID 307

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357631615|gb|EHJ79084.1| cellular retinaldehyde-binding protein [Danaus plexippus]

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 2/120 (1%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P++ K    IN  P +E  V  VK FL +K++KR+F+   D   LY+++P+E+LPK+YGG
Sbjct: 195 PVKLKEVHIINTSPTVERFVTFVKPFLKEKIRKRIFIHK-DIKDLYKYVPQEMLPKEYGG 253

Query: 87  DDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAVD 146
              +++E+ +NW  +L+ +RDWF       ++ES RP G   N  + F   GSF+ LA+D
Sbjct: 254 QCGTMDELQQNWTDKLIEYRDWFKAQDALVANESLRP-GRPTNYDELFGIDGSFRQLAID 312

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608409|dbj|BAM17814.1| alpha tocopherol transfer protein [Papilio xuthus]

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 77/120 (64%), Gaps = 2/120 (1%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P++ K    IN  P +E  +  VK FL +K++KR+F+   +   LY+++P+E++P++YGG
Sbjct: 195 PVKLKEVHIINTSPIVERFLTFVKPFLKEKIRKRIFIHK-ELKDLYKYVPQEMMPEEYGG 253

Query: 87  DDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAVD 146
              ++EE+ + W ++L+ +RDWF  P + +++ES RP G   N  + F   GSF+ L++D
Sbjct: 254 QCGTMEELQDQWTQKLIEYRDWFKAPGSIKANESLRP-GKPANYDELFGIDGSFRQLSID 312

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357631616|gb|EHJ79085.1| cellular retinaldehyde-binding protein [Danaus plexippus]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 76/120 (63%), Gaps = 2/120 (1%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P++ K    +N  P +ETL+  +K FL DK++ R+F+ S D  ++Y+H+PR++LP++YGG
Sbjct: 193 PVKLKEVHVVNTSPIIETLINFIKPFLKDKIKNRIFIHS-DINTIYDHVPRDMLPEEYGG 251

Query: 87  DDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAVD 146
           +  SL+E+   W K+L  +  WF +  + +++E+ R  G   N  + F   GSF+ L++D
Sbjct: 252 NGGSLDEVNREWMKKLADYTQWFKEQESVKANEALR-LGKPTNYDELFGIDGSFRQLSID 310

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321445732|gb|EFX60762.1| hypothetical protein DAPPUDRAFT_307236 [Daphnia pulex]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 4/145 (2%)

Query: 5   FKCGLFINAPPGL--ETLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVF 62
           F    F   P  L  + + Y++  P+  K   FI      +T+  ++  F+ DK+++R+ 
Sbjct: 176 FTLNHFTQRPLSLTKKHMYYLQSAPLSPKTIHFIRTTSVFQTVHNVMTNFINDKMKQRLK 235

Query: 63  VSSGDHTSLYEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFLDP-TNRRSDESK 121
           V   +  SLY+ I R++LPKDYGGD +SL E+T+ W+K++   RD+ ++   N R DES+
Sbjct: 236 VHGPNVESLYQDIDRKILPKDYGGDGMSLAELTDMWKKKVEEKRDFLMESEKNLRVDESR 295

Query: 122 RPKGSSFNPKDRFSTQGSFKTLAVD 146
           RP G +   +D F  +GSF+ L VD
Sbjct: 296 RP-GKAKTAQDIFGIEGSFRKLNVD 319

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
FB|FBgn0053966	310	CG33966 [Drosophila melanogast	0.945	0.445	0.323	6.7e-17
FB|FBgn0033437	313	CG12926 [Drosophila melanogast	0.828	0.386	0.325	1.3e-15
FB|FBgn0037323	315	CG2663 [Drosophila melanogaste	0.808	0.374	0.333	1.4e-15
FB|FBgn0053514	311	CG33514 [Drosophila melanogast	0.821	0.385	0.347	4.3e-14
FB|FBgn0053965	317	CG33965 [Drosophila melanogast	0.821	0.378	0.327	8e-14
FB|FBgn0023525	309	CG3191 [Drosophila melanogaste	0.657	0.310	0.376	4.5e-13
FB|FBgn0050339	308	CG30339 [Drosophila melanogast	0.828	0.392	0.341	9.7e-13
FB|FBgn0051636	313	CG31636 [Drosophila melanogast	0.821	0.383	0.317	1.4e-11
UNIPROTKB|Q5QPC2	279	TTPAL "Alpha-tocopherol transf	0.561	0.293	0.369	1.7e-09
RGD|1305754	343	Ttpal "tocopherol (alpha) tran	0.561	0.239	0.369	2.3e-09

FB|FBgn0053966 CG33966 [Drosophila melanogaster (taxid:7227)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 46/142 (32%), Positives = 79/142 (55%)

Query:     8 GLFINAPPGLE---TLVYIKIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVS 64
             G F+   P      T+   + +P+R +   FIN P G +T+  ++K  +  K Q R++V 
Sbjct:   170 GHFLQMSPSFAKKMTVFQEEALPLRPQGIHFINTPNGFDTIFNMIKPMMSKKQQGRLYVH 229

Query:    65 SGDHTSLYEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPK 124
                  +LY  IP++ LP +YGG++ S+ E+ + W + +LA+R+++ +  N  +DES R  
Sbjct:   230 GSKWEALYNQIPKQYLPVEYGGENGSIPELLQQWEQRILAYRNYWEEEKNYGTDESLRV- 288

Query:   125 GSSFNPKDRFSTQGSFKTLAVD 146
             G   + +  F  QGSF+ L VD
Sbjct:   289 GQPVDFESLFGLQGSFRQLNVD 310

GO:0008431 "vitamin E binding" evidence=ISS

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

FB|FBgn0033437 CG12926 [Drosophila melanogaster (taxid:7227)]

 Score = 197 (74.4 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 40/123 (32%), Positives = 72/123 (58%)

Query:    24 KIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKD 83
             K  P R K   F+NAP   E  + I K  + +K++KR  + S    SLY+++P+E LP +
Sbjct:   193 KAYPYRPKGFHFVNAPSSAEKFMSIAKSLMSEKIRKRFHIHS-KLDSLYKYVPKECLPAE 251

Query:    84 YGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTL 143
             YGG + +++++   WR +LLA++ +F +  +  ++E  R +G   + +  F  +GSF+ L
Sbjct:   252 YGGSNGTIQDVVSTWRTKLLAYKPFFEEEASYGTNEKLR-RGQPVSAESLFGIEGSFRKL 310

Query:   144 AVD 146
              +D
Sbjct:   311 DID 313

GO:0008431 "vitamin E binding" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

FB|FBgn0037323 CG2663 [Drosophila melanogaster (taxid:7227)]

 Score = 197 (74.4 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 40/120 (33%), Positives = 73/120 (60%)

Query:    27 PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
             P++ K    IN  P ++T+   VK F+ +K++ R+   + D  SLY+ +PR+LLP +YGG
Sbjct:   198 PVKVKEVHVINISPLVDTIFNFVKPFVKEKIRSRITFHN-DVESLYKVVPRDLLPNEYGG 256

Query:    87 DDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAVD 146
                 + E+ + W+++L+ +  WF D  +++++ES RP G+     D F  +G+F+ L +D
Sbjct:   257 KAGGVVELNQWWKQKLVDNTQWFKDQEDKKANESLRP-GAPKTSDDLFGMEGTFRQLNID 315

GO:0008431 "vitamin E binding" evidence=ISS

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

FB|FBgn0053514 CG33514 [Drosophila melanogaster (taxid:7227)]

 Score = 184 (69.8 bits), Expect = 4.3e-14, P = 4.3e-14
 Identities = 42/121 (34%), Positives = 66/121 (54%)

Query:    26 MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYG 85
             +P+R K   FIN   G E L  + K  +  K+Q R+FV       L E IP + LP++YG
Sbjct:   192 LPLRLKAQHFINTITGFEQLFNMFKPMMSKKMQSRLFVHGNKMGLLTEQIPLKYLPEEYG 251

Query:    86 GDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTLAV 145
             G++ + +++     K+L  + D+F +  N  +DES RP G   + +  F  +GSF+ L V
Sbjct:   252 GENGTTQDIVAAMEKKLDEYADFFQENVNFGTDESLRP-GKPIDFEGLFGVEGSFRKLNV 310

Query:   146 D 146
             D
Sbjct:   311 D 311

GO:0008431 "vitamin E binding" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

FB|FBgn0053965 CG33965 [Drosophila melanogaster (taxid:7227)]

 Score = 182 (69.1 bits), Expect = 8.0e-14, P = 8.0e-14
 Identities = 40/122 (32%), Positives = 69/122 (56%)

Query:    26 MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYG 85
             MP R K   FIN P   ET    +  + P K+++RV VSS D  +++E +P+  LP++YG
Sbjct:   197 MPTRQKGIHFINVPKAFETGFKSLLGWFPGKIKERVSVSS-DPEAIFERVPKHYLPEEYG 255

Query:    86 GDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKD-RFSTQGSFKTLA 144
             G   +++++T+    +L ++R +F D  +  + +  R + S  NP +  F   GSF+ L 
Sbjct:   256 GSKGTMKDITDQMEAKLCSYRSYFEDCQHFGAHDKLREEASVLNPDESHFGVDGSFRQLV 315

Query:   145 VD 146
             +D
Sbjct:   316 ID 317

GO:0008431 "vitamin E binding" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

FB|FBgn0023525 CG3191 [Drosophila melanogaster (taxid:7227)]

 Score = 175 (66.7 bits), Expect = 4.5e-13, P = 4.5e-13
 Identities = 38/101 (37%), Positives = 61/101 (60%)

Query:    17 LETL-VYIKIM----PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSL 71
             + TL  YIK +    P+R +    IN P  L+ +V +VK F+ D++ K +   +    +L
Sbjct:   189 ISTLRAYIKFLQLAFPVRLRAIHMINCPTYLDRIVSVVKPFISDEVFKLIRFHTQSINTL 248

Query:    72 YEHIPRELLPKDYGGDDISLEEMTENWRKELLAHRDWFLDP 112
             YE +PRE+LP++YGG   SLE +  + +K L+ HRD+ +DP
Sbjct:   249 YEFVPREMLPEEYGGGAGSLEALRTHTQKALVEHRDYLMDP 289

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

FB|FBgn0050339 CG30339 [Drosophila melanogaster (taxid:7227)]

 Score = 172 (65.6 bits), Expect = 9.7e-13, P = 9.7e-13
 Identities = 42/123 (34%), Positives = 63/123 (51%)

Query:    24 KIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKD 83
             K  P R K    IN P     L+ + K  +P KLQ+R  V   +   L E IPRE LP++
Sbjct:   188 KAQPTRLKGVHLINCPKEGVALLNLAKSLMPSKLQQRFHVYK-NLEQLNEVIPREYLPEE 246

Query:    84 YGGDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSFNPKDRFSTQGSFKTL 143
             YGG++  + ++     K+LL++  +F + +    DE  RP G   N    F  +GSF+ L
Sbjct:   247 YGGNNGRIADIQAEAEKKLLSYESYFAEDSQYGVDEQLRP-GKRVNADSIFGAEGSFRKL 305

Query:   144 AVD 146
              +D
Sbjct:   306 DID 308

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

FB|FBgn0051636 CG31636 [Drosophila melanogaster (taxid:7227)]

 Score = 162 (62.1 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 39/123 (31%), Positives = 66/123 (53%)

Query:    26 MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYG 85
             MP R K   FIN P   ET    ++ F P K++ R+ VSS D  ++YE + R+ LP++YG
Sbjct:   192 MPTRQKGIHFINVPAAFETGFNSLRSFFPAKIKSRISVSS-DPAAIYELVRRKYLPQEYG 250

Query:    86 GDDISLEEMTENWRKELLAHRDWFLDPTNRRSDESKRPKGSSF--NPKDRFSTQGSFKTL 143
             G   +L++++     +L ++  +F +  N  +++  R  G     N +  F   GSF+ L
Sbjct:   251 GTGGNLQDISHTMEAKLSSYGPYFRESQNFGANDKLREFGDHKRGNHRSSFGAVGSFRKL 310

Query:   144 AVD 146
              +D
Sbjct:   311 EID 313

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|Q5QPC2 TTPAL "Alpha-tocopherol transfer protein-like" [Homo sapiens (taxid:9606)]

 Score = 142 (55.0 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 31/84 (36%), Positives = 46/84 (54%)

Query:    27 PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
             P+R K    +N P   + +  I+K FL +K+  R F+   D  SL+ ++PR +LPK+YGG
Sbjct:   183 PIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGG 242

Query:    87 DDISLEEMTENWRKELLAHRDWFL 110
                 L+  T  W   LLA  D F+
Sbjct:   243 TAGELD--TATWNAVLLASEDDFV 264

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

RGD|1305754 Ttpal "tocopherol (alpha) transfer protein-like" [Rattus norvegicus (taxid:10116)]

 Score = 143 (55.4 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 31/84 (36%), Positives = 47/84 (55%)

Query:    27 PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
             P+R K    +N P   + +  I+K FL +K+  R F+   D +SL+  +PR +LPK+YGG
Sbjct:   218 PIRIKAVHIVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLSSLHTSLPRNILPKEYGG 277

Query:    87 DDISLEEMTENWRKELLAHRDWFL 110
                 L+  T +W   LLA  D F+
Sbjct:   278 TAGELD--TASWNAVLLASEDDFV 299

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	146
cd00170	157	cd00170, SEC14, Sec14p-like lipid-binding domain	7e-12
pfam00650	152	pfam00650, CRAL_TRIO, CRAL/TRIO domain	4e-11
smart00516	158	smart00516, SEC14, Domain in homologues of a S	1e-10

>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain

 Score = 58.9 bits (143), Expect = 7e-12
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 26  MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYG 85
            P R K    IN P   + L  IVK FL +K +K++     D   L ++I +E LP++YG
Sbjct: 96  YPERLKAVYIINPPWFFKVLWKIVKPFLSEKTRKKIVFLGSDKEELLKYIDKEQLPEEYG 155

Query: 86  G 86
           G
Sbjct: 156 G 156

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157

>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain

 Score = 56.9 bits (138), Expect = 4e-11
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 26  MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRV-FVSSGDHTSLYEHIPRELLPKDY 84
            P R    L +NAP     +  ++K FL  K ++++ F  + +   L ++IP E LPK+Y
Sbjct: 90  YPERLGKILIVNAPWIFNVIWKLIKPFLDPKTREKIHFHKNSNLEELLKYIPPEQLPKEY 149

Query: 85  GGD 87
           GG 
Sbjct: 150 GGT 152

Length = 152

>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S

 Score = 55.8 bits (135), Expect = 1e-10
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKL-QKRVFVSSGDHTSLYEHIPRELLPKDYG 85
           P R      IN P     L  I+K FL +K  +K  FV +     L E+I +E LP++ G
Sbjct: 95  PERLGKVYIINPPWFFRVLWKIIKPFLDEKTREKIRFVGNDSKEELLEYIDKEQLPEELG 154

Query: 86  GDD 88
           G  
Sbjct: 155 GTL 157

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
KOG1471|consensus	317		99.86
PF00650	159	CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T	99.81
cd00170	157	SEC14 Sec14p-like lipid-binding domain. Found in s	99.77
smart00516	158	SEC14 Domain in homologues of a S. cerevisiae phos	99.74
KOG1470|consensus	324		99.61
PF13716	149	CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q	98.47
KOG4406|consensus	467		96.39

>KOG1471|consensus

Probab=99.86  E-value=2.6e-22  Score=163.67  Aligned_cols=86  Identities=33%  Similarity=0.460  Sum_probs=77.2

Q ss_pred             ccCccccC--CHHHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhccee-ecCCChhhHhhhCCCCCCC
Q psy12585          6 KCGLFINA--PPGLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVF-VSSGDHTSLYEHIPRELLP   81 (146)
Q Consensus         6 ~~~~~~~~--~p~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~-~~~~~~e~L~~~i~~~~LP   81 (146)
                      .+.++.+.  +..++++.++| +||+|++++||||+|++|+++|++++|||++++++||+ +|+++.++|+++||+++||
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~q~~yPe~l~~~~iIN~P~~f~~~~~~ikpfL~~kt~~ki~~~~~~~~~~L~k~i~~~~LP  250 (317)
T KOG1471|consen  171 SLSHLLKPAPTLLKKILKILQDNYPERLKRIHIINAPTIFSALWKVVKPFLDEKTRKKIHVLHSKDKESLLKYIPPEVLP  250 (317)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhCHHhhceEEEEcCchhHHHHHHHHhccCCHHHHhhheecCCCchhhhhhhCCHhhCc
Confidence            45566544  44459999999 99999999999999999999999999999999999999 6767789999999999999


Q ss_pred             ccCCCCCCCh
Q psy12585         82 KDYGGDDISL   91 (146)
Q Consensus        82 ~eyGG~~~~~   91 (146)
                      .+|||++++.
T Consensus       251 ~~yGG~~~~~  260 (317)
T KOG1471|consen  251 EEYGGTCGDL  260 (317)
T ss_pred             cccCCCcccc
Confidence            9999999765

>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=99.81  E-value=1.7e-20  Score=137.57  Aligned_cols=75  Identities=33%  Similarity=0.417  Sum_probs=66.3

Q ss_pred             CCHHHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCC-Ch-hhHhhhCCCCCCCccCCCC
Q psy12585         13 APPGLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSG-DH-TSLYEHIPRELLPKDYGGD   87 (146)
Q Consensus        13 ~~p~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~-~~-e~L~~~i~~~~LP~eyGG~   87 (146)
                      .+..+.+++++| +||+|++++|+||+|++++.+|++++|||++++++||+++++ ++ ++|.++||++.||.+|||+
T Consensus        82 ~~~~k~~~~~~~~~yP~rl~~i~iin~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~~~~~l~~~i~~~~lP~~~GG~  159 (159)
T PF00650_consen   82 ISFLKKIIQLLQDHYPERLGKIYIINAPWFFRVLWKIVKPFLSPKTREKIVFHSGSDWKAKLKEYIDPEQLPVEYGGT  159 (159)
T ss_dssp             HHHHHHHHHHHHHHSTTTEEEEEEES--TTHHHHHHHHGGGS-HHHHCTEEEECTTCHCHHHCCCSTGGGSBGGGTSS
T ss_pred             hhhhhhhhhhhcccCCccceeEEEEecChhhhhhHhHHHhhcCHhhheeEEEECCcccHHHHHhhCCHhHCchhcCCC
Confidence            445569999999 999999999999999999999999999999999999999954 45 7899999999999999996

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1OLM_E 1O6U_E 3Q8G_A 3B7Q_B 3B7Z_A ....

>cd00170 SEC14 Sec14p-like lipid-binding domain

Probab=99.77  E-value=6e-19  Score=127.12  Aligned_cols=74  Identities=32%  Similarity=0.476  Sum_probs=69.4

Q ss_pred             CHHHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCChhhHhhhCCCCCCCccCCCC
Q psy12585         14 PPGLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGGD   87 (146)
Q Consensus        14 ~p~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~~e~L~~~i~~~~LP~eyGG~   87 (146)
                      +..++++..+| +||+|++.+|++|+|++++.+|+++++|+++++++||++++++.++|.+++|+++||.+|||+
T Consensus        83 ~~~k~~~~~~~~~yp~~l~~v~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~~~L~~~i~~~~Lp~~~GG~  157 (157)
T cd00170          83 SLLKKILKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKTRKKIVFLGSDKEELLKYIDKEQLPEEYGGT  157 (157)
T ss_pred             HHHHHHHHHHHHhChHhhCeEEEECCCHhHHHHHHHHHHhcCHhhhhhEEEecCCHHHHHhhCChhhCcHhhCCC
Confidence            45669999999 999999999999999999999999999999999999999943389999999999999999996

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>smart00516 SEC14 Domain in homologues of a S

Probab=99.74  E-value=3.8e-18  Score=124.91  Aligned_cols=75  Identities=29%  Similarity=0.372  Sum_probs=69.8

Q ss_pred             CHHHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCC-hhhHhhhCCCCCCCccCCCCC
Q psy12585         14 PPGLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGD-HTSLYEHIPRELLPKDYGGDD   88 (146)
Q Consensus        14 ~p~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~-~e~L~~~i~~~~LP~eyGG~~   88 (146)
                      +-.++++..+| +||+|++++||+|+|++++++|+++++|+++++++||++++++ .++|.+++|+++||++|||++
T Consensus        81 ~~lk~~~~~~~~~yp~~l~~i~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~~~~L~~~i~~~~lP~~~GG~~  157 (158)
T smart00516       81 SVLRKILKILQDHYPERLGKVLIINPPWFFRVLWKIIKPFLDEKTREKIRFVGNDSKEELLEYIDPEQLPEELGGTL  157 (158)
T ss_pred             HHHHHHHHHHHHHhHHHhCeEEEECCCHHHHHHHHHHHhhcChhhhccEEEeCCCCHHHHHhhCCHhhCcHhhCCCC
Confidence            34558999999 9999999999999999999999999999999999999999543 789999999999999999986

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>KOG1470|consensus

Probab=99.61  E-value=5.3e-16  Score=127.59  Aligned_cols=77  Identities=26%  Similarity=0.283  Sum_probs=72.6

Q ss_pred             ccCCHHHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCChhhHhhhCCCCCCCccCCCCC
Q psy12585         11 INAPPGLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGGDD   88 (146)
Q Consensus        11 ~~~~p~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~~e~L~~~i~~~~LP~eyGG~~   88 (146)
                      ..+++++.+++++| +||+||....++|+|++|+.+|+++||||+++|+++|.|. .+.+++.++||++.||.+|||+.
T Consensus       166 ~d~~~~k~~~~~lq~hYPErLg~a~l~~~P~iF~~~wkiikpflDp~t~~Kv~F~-~~~~~l~~~~d~~~l~s~~GG~~  243 (324)
T KOG1470|consen  166 PDIKFLKELLHILQDHYPERLGKALLVNAPWIFQPFWKIIKPFLDPKTASKVKFV-EPKDDLSEYFDESQLPSLFGGKL  243 (324)
T ss_pred             CCcHHHHHHHHHHHHhChHHhhhhhhcCChHHHHHHHHHhhhccChhhhceeEEe-cChhHHHhhCCccccchhhCCCc
Confidence            35577889999999 9999999999999999999999999999999999999999 77777999999999999999977

>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A

Probab=98.47  E-value=1.9e-08  Score=73.52  Aligned_cols=75  Identities=16%  Similarity=0.177  Sum_probs=56.2

Q ss_pred             CCHHHHHHHHHh-hcchhccceeEEeCChHHHHHH-HHHHHhCCchh-hcceeecCCChhhHhhhCCCCCCCccCCCCC
Q psy12585         13 APPGLETLVYIK-IMPMRFKCGLFINAPPGLETLV-YIVKQFLPDKL-QKRVFVSSGDHTSLYEHIPRELLPKDYGGDD   88 (146)
Q Consensus        13 ~~p~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~-~~vkpfl~~k~-~~rI~~~~~~~e~L~~~i~~~~LP~eyGG~~   88 (146)
                      ++-.+++...++ .++.+++.|+|+|+.+++..++ .+.+++.+.+. ..+|.+. ++.++|.+|||++.||++.||+.
T Consensus        67 ~~~l~~~~~~l~~~~~~nl~~vyiv~p~~~~k~~~~~~~~~~~~~~~~~~kv~~~-~sl~~L~~~i~~~qL~~~lp~~~  144 (149)
T PF13716_consen   67 LSWLKQLYKLLPRKYKKNLKKVYIVHPNWFLKKILATLLRPFVSSKFWKKKVVYV-SSLSELSKHIDPSQLPESLPGVL  144 (149)
T ss_dssp             HHHHHHTTTSS-HHHHHTEEEEEEES--HHHHHHHHHTTTTGGGGTT--TTEEEE-SSTCGGGGTSGGGG------HHH
T ss_pred             hHHHHHHHHHHHHHHhhceEEEEEECCCHHHHHHHHHHhcccccccccceEEEEE-CCHHHHHhhCCHHHhcccCCCEE
Confidence            344447777788 8999999999999999999999 67778889998 8999988 78999999999999999999765

>KOG4406|consensus

Probab=96.39  E-value=0.0024  Score=54.72  Aligned_cols=51  Identities=10%  Similarity=0.188  Sum_probs=47.0

Q ss_pred             hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCChhhHhhhCC
Q psy12585         25 IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIP   76 (146)
Q Consensus        25 ~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~~e~L~~~i~   76 (146)
                      .|---+|.+|+|.+-|+..++|+++|||++.|..+||+-. +.+++|++++.
T Consensus       161 ~~~KNlKalYvvHptwfikvi~n~~kplIS~KF~rKi~Y~-n~lseL~~~l~  211 (467)
T KOG4406|consen  161 NFKKNLKALYVVHPTWFIKVIWNLFKPLISLKFTRKIIYF-NSLSELFEALK  211 (467)
T ss_pred             HHhhhhhheEEecHHHHHHHHHHHHhhhcchhhhceeEEe-ehHHHHHHhhh
Confidence            7778899999999999999999999999999999999988 67899998765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	146
3hy5_A	316	Crystal Structure Of Cralbp Length = 316		2e-07
1oip_A	278	The Molecular Basis Of Vitamin E Retention: Structu		9e-07
3hx3_A	316	Crystal Structure Of Cralbp Mutant R234w Length = 3		2e-06
1r5l_A	262	Crystal Structure Of Human Alpha-tocopherol Transfe		1e-05

>pdb|3HY5|A Chain A, Crystal Structure Of Cralbp Length = 316

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 33/60 (55%)
Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYGG 86
           P RFK   FI+ P    T   +VK FL  KL +RVFV   D +  Y+ I   +LP D+GG
Sbjct: 231 PARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGG 290

>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDH-TSLYEHIPRELLPKDYG 85
           P++ +    IN P     +  ++K FL +K+++R+ +   ++  SL +H P ++LP +YG
Sbjct: 188 PLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPLEYG 246
Query: 86  GDDISLEEMTENWRKELLAHRDWF 109
           G++ S+E++ + W   ++   D+ 
Sbjct: 247 GEEFSMEDICQEWTNFIMKSEDYL 270

>pdb|3HX3|A Chain A, Crystal Structure Of Cralbp Mutant R234w Length = 316

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 26  MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYG 85
            P  FK   FI+ P    T   +VK FL  KL +RVFV   D +  Y+ I   +LP D+G
Sbjct: 230 FPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFG 289
Query: 86  G 86
           G
Sbjct: 290 G 290

>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 26  MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDH-TSLYEHIPRELLPKDY 84
            P++ +    IN P     +   +K FL +K+++R+     ++  SL +H P ++LP +Y
Sbjct: 171 FPLKVRGIHLINEPVIFHAVFSXIKPFLTEKIKERIHXHGNNYKQSLLQHFP-DILPLEY 229
Query: 85  GGDDISLEEMTENWRKELLAHRDWF 109
           GG++ S E++ + W   +    D+ 
Sbjct: 230 GGEEFSXEDICQEWTNFIXKSEDYL 254

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	146
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	3e-26
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	3e-19
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	1e-09
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	3e-08
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	6e-08

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262

 Score = 98.2 bits (245), Expect = 3e-26
 Identities = 18/85 (21%), Positives = 44/85 (51%)

Query: 26  MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYG 85
            P++ +    IN P     +  ++K FL +K+++R+ +   ++         ++LP +YG
Sbjct: 171 FPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYG 230

Query: 86  GDDISLEEMTENWRKELLAHRDWFL 110
           G++ S+E++ + W   ++   D+  
Sbjct: 231 GEEFSMEDICQEWTNFIMKSEDYLS 255

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316

 Score = 80.9 bits (200), Expect = 3e-19
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 1/82 (1%)

Query: 26  MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYG 85
            P  FK   FI+ P    T   +VK FL  KL +RVFV   D +  Y+ I   +LP D+G
Sbjct: 230 FPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFG 289

Query: 86  GDDISLEEMTENWRKELLAHRD 107
           G  +   +      +       
Sbjct: 290 G-TLPKYDGKAVAEQLFGPQAQ 310

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403

 Score = 54.2 bits (130), Expect = 1e-09
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 26  MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTS-LYEHIPRELLPKDY 84
            P   K    + AP        ++K FL +  +K++ V   +    L +HI  + +P +Y
Sbjct: 182 YPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEY 241

Query: 85  GG 86
           GG
Sbjct: 242 GG 243

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320

 Score = 50.2 bits (120), Expect = 3e-08
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTS-LYEHIPRELLPKDYG 85
           P R      I++P G  T+  +VK FL      ++F+    +   L + IP E LP  YG
Sbjct: 218 PERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELLKQIPIENLPVKYG 277

Query: 86  GD 87
           G 
Sbjct: 278 GT 279

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296

 Score = 49.0 bits (117), Expect = 6e-08
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 27  PMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTS-LYEHIPRELLPKDYG 85
           P R      INAP G  T   + K FL      ++F+    +   L + IP E LP  +G
Sbjct: 203 PERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFG 262

Query: 86  GD 87
           G 
Sbjct: 263 GK 264

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	146
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	99.94
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	99.89
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	99.85
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	99.82
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	99.81
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	96.89
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	94.57

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=99.94  E-value=1e-27  Score=188.50  Aligned_cols=107  Identities=21%  Similarity=0.546  Sum_probs=97.1

Q ss_pred             cCccccCCH--HHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCCh-hhHhhhCCCCCCCc
Q psy12585          7 CGLFINAPP--GLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDH-TSLYEHIPRELLPK   82 (146)
Q Consensus         7 ~~~~~~~~p--~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~~-e~L~~~i~~~~LP~   82 (146)
                      ++++.++++  .++++.++| +||+|++++||||+|++|+.+|+++||||+++|++||+|||+++ ++|+++|| ++||+
T Consensus       149 ~~~~~~~~~~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t~~Ki~~~~~~~~~~L~~~i~-~~LP~  227 (262)
T 1r5l_A          149 FSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPL  227 (262)
T ss_dssp             HHHHHHCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSSCHHHHHHHST-TTSCG
T ss_pred             HHHHhccCHHHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHHHhcCHHHHhheEEeCCCcHHHHHHHhh-hhCcH
Confidence            345554443  569999999 99999999999999999999999999999999999999997774 89999999 99999


Q ss_pred             cCCCCCCChHHHHHHHHHHHHhcHHHhcccCC
Q psy12585         83 DYGGDDISLEEMTENWRKELLAHRDWFLDPTN  114 (146)
Q Consensus        83 eyGG~~~~~~~l~~~w~~~l~~~r~~~~~~~~  114 (146)
                      +|||+.++++++++.|.+.++++|+||.+.+.
T Consensus       228 ~yGG~~~~~~~~~~~w~~~l~~~~~~~~~~~~  259 (262)
T 1r5l_A          228 EYGGEEFSMEDICQEWTNFIMKSEDYLSSISE  259 (262)
T ss_dssp             GGTCSSCCHHHHHHHHHHHHHHTHHHHHHTCC
T ss_pred             hhCCCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999987543

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*

Probab=99.89  E-value=2.4e-24  Score=175.36  Aligned_cols=98  Identities=28%  Similarity=0.422  Sum_probs=86.9

Q ss_pred             cccCccccCCH--HHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCChhhHhhhCCCCCCC
Q psy12585          5 FKCGLFINAPP--GLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLP   81 (146)
Q Consensus         5 ~~~~~~~~~~p--~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~~e~L~~~i~~~~LP   81 (146)
                      +.++|+.+++|  .++++.++| +||+|++++||||+|++|+.+|+++||||++++++||+|||+++++|+++||+++||
T Consensus       206 ~sl~~~~~~~~~~~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~KI~~~~~~~~~L~~~I~~~~LP  285 (316)
T 3hx3_A          206 FTMQQAASLRTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILP  285 (316)
T ss_dssp             CCHHHHHHCCHHHHHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTTEEEEETCCHHHHHHSCGGGSB
T ss_pred             CCHHHhccCChHHHHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhheEEeCCCHHHHHhhCCHhhCc
Confidence            34556666655  469999999 999999999999999999999999999999999999999988899999999999999


Q ss_pred             ccCCCCCCChHHHHHHHHHHHHh
Q psy12585         82 KDYGGDDISLEEMTENWRKELLA  104 (146)
Q Consensus        82 ~eyGG~~~~~~~l~~~w~~~l~~  104 (146)
                      ++|||++++.+  ++.|.+.|..
T Consensus       286 ~eyGG~~~~~d--~~~~~~~l~~  306 (316)
T 3hx3_A          286 SDFGGTLPKYD--GKAVAEQLFG  306 (316)
T ss_dssp             GGGTSSBCCCC--HHHHHHHHC-
T ss_pred             HhhCCCCCCcC--hhHHHHHHcC
Confidence            99999997665  6788887754

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=99.85  E-value=3.7e-22  Score=160.12  Aligned_cols=78  Identities=27%  Similarity=0.364  Sum_probs=72.0

Q ss_pred             CHHHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCC-hhhHhhhCCCCCCCccCCCCCCCh
Q psy12585         14 PPGLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGD-HTSLYEHIPRELLPKDYGGDDISL   91 (146)
Q Consensus        14 ~p~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~-~e~L~~~i~~~~LP~eyGG~~~~~   91 (146)
                      +..++++.++| +||+|++++||||+|++|+++|+++||||+++|++||+|||++ .++|+++||+++||++|||++...
T Consensus       189 ~~~k~~~~~~q~~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~~~~~~L~~~i~~~~LP~~yGG~~~~~  268 (296)
T 1aua_A          189 SYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGKSEVD  268 (296)
T ss_dssp             HHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSBGGGTSCBCCC
T ss_pred             HHHHHHHHHHHHhHHHhhCeEEEECchHHHHHHHHHHHhhcCHhhcceEEEeCcccHHHHHhhCCHhhCcHHhCCCCCCC
Confidence            34558899999 9999999999999999999999999999999999999999776 478999999999999999999654

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*

Probab=99.82  E-value=6.1e-21  Score=159.12  Aligned_cols=75  Identities=24%  Similarity=0.400  Sum_probs=71.1

Q ss_pred             HHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCCh-hhHhhhCCCCCCCccCCCCCCC
Q psy12585         16 GLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDH-TSLYEHIPRELLPKDYGGDDIS   90 (146)
Q Consensus        16 ~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~~-e~L~~~i~~~~LP~eyGG~~~~   90 (146)
                      .++++.++| +||+|++++||||+|++|+++|+++||||+++|++||+||++++ ++|+++||+++||++|||++.+
T Consensus       171 ~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~I~~~~LP~~yGG~~~~  247 (403)
T 1olm_A          171 YGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGGTMTD  247 (403)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTTHHHHHTTTSCGGGSBGGGTSSBCC
T ss_pred             HHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEEChhHHHHHHhhcChhhCchhhCCCcCC
Confidence            469999999 99999999999999999999999999999999999999997675 6899999999999999999965

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=99.81  E-value=3.4e-21  Score=157.29  Aligned_cols=76  Identities=26%  Similarity=0.393  Sum_probs=71.4

Q ss_pred             HHHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCCh-hhHhhhCCCCCCCccCCCCCCC
Q psy12585         15 PGLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDH-TSLYEHIPRELLPKDYGGDDIS   90 (146)
Q Consensus        15 p~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~~-e~L~~~i~~~~LP~eyGG~~~~   90 (146)
                      ..++++.++| +||+|++++||||+|++|+.+|+++||||++++++||+|||+++ ++|.++||+++||++|||+++.
T Consensus       205 ~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~i~~~~LP~~yGG~~~~  282 (320)
T 3q8g_A          205 YIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELLKQIPIENLPVKYGGTSVL  282 (320)
T ss_dssp             HHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCTTHHHHHHHHSCGGGSBGGGTSCBCC
T ss_pred             HHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCCCcHHHHHhhCChhhCChhhCCCCCC
Confidence            3558999999 99999999999999999999999999999999999999998774 8999999999999999999954

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*

Probab=96.89  E-value=0.00051  Score=54.09  Aligned_cols=62  Identities=16%  Similarity=0.026  Sum_probs=51.5

Q ss_pred             HHHHHHh-hcchhccceeEEeCChHHHHHHH-HHHHhCCchhhcceeecCCChhhHhhhCCCCCC
Q psy12585         18 ETLVYIK-IMPMRFKCGLFINAPPGLETLVY-IVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELL   80 (146)
Q Consensus        18 ~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~-~vkpfl~~k~~~rI~~~~~~~e~L~~~i~~~~L   80 (146)
                      ++..++. .|...++++||+|+++++...+. +.++|.+.+..+++++. ++.++|.++|+.+.|
T Consensus        81 ~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv-~sl~eL~~~i~~~~L  144 (256)
T 3pg7_A           81 KWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFI-DCPGKLAEHIEHEQQ  144 (256)
T ss_dssp             HTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEE-SSTTGGGGTSCGGGC
T ss_pred             HHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEE-CCHHHHHhhcCHHHc
Confidence            5556666 77788999999999999986654 46778877999999999 789999999988766

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	146
d1r5la2	185	c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot	4e-19
d1olma3	199	c.13.1.1 (A:76-274) Supernatant protein factor (SP	4e-11
d1auaa2	203	c.13.1.1 (A:97-299) C-terminal domain of phosphati	4e-09

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 4e-19
 Identities = 18/86 (20%), Positives = 44/86 (51%)

Query: 26  MPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLPKDYG 85
            P++ +    IN P     +  ++K FL +K+++R+ +   ++         ++LP +YG
Sbjct: 97  FPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYG 156

Query: 86  GDDISLEEMTENWRKELLAHRDWFLD 111
           G++ S+E++ + W   ++   D+   
Sbjct: 157 GEEFSMEDICQEWTNFIMKSEDYLSS 182

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 4e-11
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 24  KIMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRV-FVSSGDHTSLYEHIPRELLPK 82
           +  P   K    + AP        ++K FL +  +K++  + +     L +HI  + +P 
Sbjct: 105 ENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPV 164

Query: 83  DYGG 86
           +YGG
Sbjct: 165 EYGG 168

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.5 bits (120), Expect = 4e-09
 Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 26  MPMRFKCGLFINAPPGLETLVYIVKQFLPDKL-QKRVFVSSGDHTSLYEHIPRELLPKDY 84
            P R      INAP G  T   + K FL      K   + S     L + IP E LP  +
Sbjct: 109 YPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKF 168

Query: 85  GGDD 88
           GG  
Sbjct: 169 GGKS 172

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	146
d1r5la2	185	Alpha-tocopherol transfer protein {Human (Homo sap	99.95
d1olma3	199	Supernatant protein factor (SPF), middle domain {H	99.85
d1auaa2	203	C-terminal domain of phosphatidylinositol transfer	99.79

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.4e-29  Score=188.16  Aligned_cols=109  Identities=17%  Similarity=0.460  Sum_probs=99.4

Q ss_pred             cccCccccCCHHH--HHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCChhhHhhhCCCCCCC
Q psy12585          5 FKCGLFINAPPGL--ETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDHTSLYEHIPRELLP   81 (146)
Q Consensus         5 ~~~~~~~~~~p~~--~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~~e~L~~~i~~~~LP   81 (146)
                      |..+++.++++..  ++++++| +||+|++++|+||+|++|+.+|+++||||++++++||+||+++.+++..++++++||
T Consensus        73 ~s~~~~~~~~~~~~~~~~~~~q~~yP~rl~~i~ivn~P~~~~~~~~~vk~fl~~k~~~Ki~~~~~~~~~~~~~~~~~~LP  152 (185)
T d1r5la2          73 WQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILP  152 (185)
T ss_dssp             CCHHHHHHCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSSCHHHHHHHSTTTSC
T ss_pred             CCHHHhhhccHHHHHHHHHHHHhhCchhhheeEEEcCCHHHHHHHHHHHHhccHHHHhheEEeccchHHHHhhcCHHhCC
Confidence            3445666665544  8999999 999999999999999999999999999999999999999988888888899999999


Q ss_pred             ccCCCCCCChHHHHHHHHHHHHhcHHHhcccC
Q psy12585         82 KDYGGDDISLEEMTENWRKELLAHRDWFLDPT  113 (146)
Q Consensus        82 ~eyGG~~~~~~~l~~~w~~~l~~~r~~~~~~~  113 (146)
                      ++|||+++++++++++|.+++.++||||++.+
T Consensus       153 ~~~GG~~~~~~~~~~~~~~~~~~~~d~~~~~~  184 (185)
T d1r5la2         153 LEYGGEEFSMEDICQEWTNFIMKSEDYLSSIS  184 (185)
T ss_dssp             GGGTCSSCCHHHHHHHHHHHHHHTHHHHHHTC
T ss_pred             HhcCCCCCChHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999654

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.3e-22  Score=151.79  Aligned_cols=86  Identities=21%  Similarity=0.339  Sum_probs=76.0

Q ss_pred             cccCccccC--CHHHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCCh-hhHhhhCCCCCC
Q psy12585          5 FKCGLFINA--PPGLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGDH-TSLYEHIPRELL   80 (146)
Q Consensus         5 ~~~~~~~~~--~p~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~~-e~L~~~i~~~~L   80 (146)
                      |.++++.+.  ...++++.++| +||+|+++|||||+|++|+.+|+++||||++++++||+||+++. ++|+++|++++|
T Consensus        83 ~s~~~~~~~~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~~~~~~L~~~i~~~~l  162 (199)
T d1olma3          83 LGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQV  162 (199)
T ss_dssp             CCGGGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTTHHHHHTTTSCGGGS
T ss_pred             CchhhhccccHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCCCCHHHHHHhCCHhhC
Confidence            344556543  33558999999 99999999999999999999999999999999999999997664 889999999999


Q ss_pred             CccCCCCCCC
Q psy12585         81 PKDYGGDDIS   90 (146)
Q Consensus        81 P~eyGG~~~~   90 (146)
                      |++|||+++.
T Consensus       163 P~~yGGt~~~  172 (199)
T d1olma3         163 PVEYGGTMTD  172 (199)
T ss_dssp             BGGGTSSBCC
T ss_pred             CHHhCCCCCC
Confidence            9999999854

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=7.9e-20  Score=137.49  Aligned_cols=74  Identities=28%  Similarity=0.418  Sum_probs=69.9

Q ss_pred             HHHHHHHHh-hcchhccceeEEeCChHHHHHHHHHHHhCCchhhcceeecCCC-hhhHhhhCCCCCCCccCCCCCC
Q psy12585         16 GLETLVYIK-IMPMRFKCGLFINAPPGLETLVYIVKQFLPDKLQKRVFVSSGD-HTSLYEHIPRELLPKDYGGDDI   89 (146)
Q Consensus        16 ~~~~~~~~q-~~P~Rlk~ihiiN~P~~~~~i~~~vkpfl~~k~~~rI~~~~~~-~e~L~~~i~~~~LP~eyGG~~~   89 (146)
                      .++++.++| +||+|+++|||||+|++|+.+|+++++||+++|++||++++++ .++|.++|++++||.+|||++.
T Consensus        98 ~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~~~~~~L~~~id~~~LP~~~GG~~~  173 (203)
T d1auaa2          98 VREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGKSE  173 (203)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSBGGGTSCBC
T ss_pred             HHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecCCCCHHHHHhhCCHhhChHHhCCCCc
Confidence            358999999 9999999999999999999999999999999999999999765 5999999999999999999984