Psyllid ID: psy12593


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
MYWVSTYYPHQGQFQEVLQDVFCAESTMATTPFPRSAGFKGILESVQDFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQLRKTLIVYNFLQVLFSSWLFYE
cEEEEEEEcccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHcccccccHHHHHHHHHHHHHHHHHHEEc
cEEEEEEcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHcc
mywvstyyphqgqfQEVLQDVFcaestmattpfprsagfkgILESVQDFYFDvmnnrsdprvkdwflmsgplptvcICLSYAFIVKIvgpklmedrkpfqlrKTLIVYNFLQVLFSSWLFYE
mywvstyyphqgQFQEVLQDVFCAESTMAttpfprsagFKGILESVQDFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQLRKTLIVYNFLQVLFSSWLFYE
MYWVSTYYPHQGQFQEVLQDVFCAESTMATTPFPRSAGFKGILESVQDFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQLRKTLIVYNFLQVLFSSWLFYE
*YWVSTYYPHQGQFQEVLQDVFCAESTMATTPFPRSAGFKGILESVQDFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQLRKTLIVYNFLQVLFSSWLFY*
*YW*ST*YPHQGQFQEV****************PRSAGFKGILESVQDFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQLRKTLIVYNFLQVLFSSWLFYE
MYWVSTYYPHQGQFQEVLQDVFCAESTMATTPFPRSAGFKGILESVQDFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQLRKTLIVYNFLQVLFSSWLFYE
MYWVSTYYPHQGQFQEVLQDVFCAESTMATTPFPRSAGFKGILESVQDFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQLRKTLIVYNFLQVLFSSWLFYE
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHo
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MYWVSTYYPHQGQFQEVLQDVFCAESTMATTPFPRSAGFKGILESVQDFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQLRKTLIVYNFLQVLFSSWLFYE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query122 2.2.26 [Sep-21-2011]
Q1HRV8 358 Elongation of very long c N/A N/A 0.614 0.209 0.613 7e-24
A0JNC4 281 Elongation of very long c yes N/A 0.590 0.256 0.541 5e-16
D4ADY9 281 Elongation of very long c yes N/A 0.598 0.259 0.506 3e-15
A1L3X0 281 Elongation of very long c yes N/A 0.590 0.256 0.513 4e-15
Q9D2Y9 281 Elongation of very long c yes N/A 0.598 0.259 0.506 1e-14
Q9JLJ5 279 Elongation of very long c no N/A 0.647 0.283 0.412 1e-12
Q9BW60 279 Elongation of very long c no N/A 0.647 0.283 0.437 2e-12
Q9EQC4 312 Elongation of very long c no N/A 0.524 0.205 0.492 3e-10
Q9GZR5 314 Elongation of very long c no N/A 0.524 0.203 0.476 1e-09
Q3S8M4 314 Elongation of very long c no N/A 0.524 0.203 0.476 1e-09
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2 Back     alignment and function desciption
 Score =  108 bits (271), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 46/75 (61%), Positives = 59/75 (78%)

Query: 48  DFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQLRKTLIV 107
           D     M+   DPR KDW LMS P PT+ +CL Y ++VK++GP+LME+RKPFQLR TLI+
Sbjct: 9   DSMHHYMDKYGDPRTKDWPLMSSPFPTLALCLGYVYLVKVLGPRLMENRKPFQLRNTLIL 68

Query: 108 YNFLQVLFSSWLFYE 122
           YNF+QV+FS+WLFYE
Sbjct: 69  YNFVQVVFSAWLFYE 83




Could be implicated in synthesis of very long chain fatty acids.
Aedes aegypti (taxid: 7159)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1 Back     alignment and function description
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1 Back     alignment and function description
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1 Back     alignment and function description
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1 Back     alignment and function description
>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus GN=Elovl1 PE=2 SV=1 Back     alignment and function description
>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens GN=ELOVL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2 Back     alignment and function description
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1 Back     alignment and function description
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
332375807 317 unknown [Dendroctonus ponderosae] 0.663 0.255 0.641 2e-26
328701144 348 PREDICTED: elongation of very long chain 0.663 0.232 0.679 1e-25
91090562 325 PREDICTED: similar to CG31522 CG31522-PB 0.663 0.249 0.654 4e-25
383849796 325 PREDICTED: elongation of very long chain 0.663 0.249 0.604 8e-25
156553618 335 PREDICTED: elongation of very long chain 0.614 0.223 0.68 2e-24
357614996 299 hypothetical protein KGM_16387 [Danaus p 0.655 0.267 0.612 4e-24
307192488 344 Elongation of very long chain fatty acid 0.663 0.235 0.629 5e-24
91090560 333 PREDICTED: similar to elongase, putative 0.663 0.243 0.592 6e-24
312374906 916 hypothetical protein AND_15361 [Anophele 0.663 0.088 0.617 1e-23
195451858 331 GK13951 [Drosophila willistoni] gi|19416 0.655 0.241 0.612 1e-23
>gi|332375807|gb|AEE63044.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 52/81 (64%), Positives = 68/81 (83%)

Query: 42  ILESVQDFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQL 101
           IL  + D Y D+++N+SD RVK WFLMS PLPT+CICL+Y +IVK++GPKLME+RKPF+L
Sbjct: 4   ILGGIYDVYRDLLDNKSDQRVKGWFLMSSPLPTLCICLTYVYIVKVLGPKLMENRKPFEL 63

Query: 102 RKTLIVYNFLQVLFSSWLFYE 122
           ++ LI YN  QV+FS+WLFYE
Sbjct: 64  KRVLIYYNLFQVIFSTWLFYE 84




Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328701144|ref|XP_001952818.2| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|91090562|ref|XP_971599.1| PREDICTED: similar to CG31522 CG31522-PB [Tribolium castaneum] gi|270013347|gb|EFA09795.1| hypothetical protein TcasGA2_TC011937 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|383849796|ref|XP_003700522.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|156553618|ref|XP_001600048.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|357614996|gb|EHJ69418.1| hypothetical protein KGM_16387 [Danaus plexippus] Back     alignment and taxonomy information
>gi|307192488|gb|EFN75681.1| Elongation of very long chain fatty acids protein AAEL008004 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|91090560|ref|XP_971544.1| PREDICTED: similar to elongase, putative [Tribolium castaneum] gi|270013348|gb|EFA09796.1| hypothetical protein TcasGA2_TC011938 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|312374906|gb|EFR22373.1| hypothetical protein AND_15361 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|195451858|ref|XP_002073106.1| GK13951 [Drosophila willistoni] gi|194169191|gb|EDW84092.1| GK13951 [Drosophila willistoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
FB|FBgn0051523 354 CG31523 [Drosophila melanogast 0.663 0.228 0.555 1.4e-23
UNIPROTKB|Q1HRV8 358 AAEL008004 "Elongation of very 0.565 0.192 0.652 2.9e-23
FB|FBgn0037534 329 CG2781 [Drosophila melanogaste 0.614 0.227 0.626 1e-22
FB|FBgn0051522 365 CG31522 [Drosophila melanogast 0.565 0.189 0.550 7.3e-20
UNIPROTKB|A0JNC4 281 ELOVL7 "Elongation of very lon 0.532 0.231 0.584 1.1e-16
UNIPROTKB|G5E592 260 ELOVL7 "Elongation of very lon 0.524 0.246 0.593 1.4e-16
FB|FBgn0038986 295 CG5278 [Drosophila melanogaste 0.614 0.254 0.493 1.8e-16
UNIPROTKB|A1L3X0 281 ELOVL7 "Elongation of very lon 0.532 0.231 0.553 7.7e-16
UNIPROTKB|D6RBM2165 ELOVL7 "Elongation of very lon 0.532 0.393 0.553 7.7e-16
UNIPROTKB|D6RBR588 ELOVL7 "Elongation of very lon 0.532 0.738 0.553 7.7e-16
FB|FBgn0051523 CG31523 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 45/81 (55%), Positives = 64/81 (79%)

Query:    42 ILESVQDFYFDVMNNRSDPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQL 101
             IL+  Q +Y D+M+N+SDPRV D+FL+S PLPT+C+C+ YA+  K +GP+LM  RKP +L
Sbjct:     4 ILQEAQKWYRDLMDNKSDPRVNDFFLLSSPLPTLCMCIFYAYFSKSLGPRLMAKRKPMEL 63

Query:   102 RKTLIVYNFLQVLFSSWLFYE 122
             R  L+VYN +Q +FS+W+FYE
Sbjct:    64 RSVLVVYNAIQTIFSAWIFYE 84




GO:0006633 "fatty acid biosynthetic process" evidence=ISS
GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
UNIPROTKB|Q1HRV8 AAEL008004 "Elongation of very long chain fatty acids protein AAEL008004" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms
FB|FBgn0037534 CG2781 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|A0JNC4 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|G5E592 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
FB|FBgn0038986 CG5278 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|A1L3X0 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|D6RBM2 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|D6RBR5 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A0JNC4ELOV7_BOVIN2, ., 3, ., 1, ., n, 80.54160.59010.2562yesN/A
D4ADY9ELOV7_RAT2, ., 3, ., 1, ., n, 80.50680.59830.2597yesN/A
Q9D2Y9ELOV7_MOUSE2, ., 3, ., 1, ., n, 80.50680.59830.2597yesN/A
A1L3X0ELOV7_HUMAN2, ., 3, ., 1, ., n, 80.51380.59010.2562yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
pfam01151 244 pfam01151, ELO, GNS1/SUR4 family 1e-13
>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family Back     alignment and domain information
 Score = 64.6 bits (158), Expect = 1e-13
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 66  FLMSGPLPTVCICLSYAFIVKIVGPKLMEDRKPFQLRKTLIVYNFLQVLFSSWLFYE 122
            L+S P P + I + Y   V + GPK+M +RKPF L++ LIV+N   VL S + FY 
Sbjct: 1   PLLSSPWPVILIIVLYLVFVFL-GPKIMRNRKPFDLKRLLIVHNLFLVLLSLYGFYG 56


Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 122
PTZ00251 272 fatty acid elongase; Provisional 99.6
KOG3071|consensus 274 99.52
PF01151 250 ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr 99.5
KOG3072|consensus 282 99.08
>PTZ00251 fatty acid elongase; Provisional Back     alignment and domain information
Probab=99.60  E-value=5.7e-16  Score=125.55  Aligned_cols=62  Identities=27%  Similarity=0.481  Sum_probs=57.5

Q ss_pred             CccccccccccCchHHHHHHHHHHHHHHHHhHHhhcc----CCCcc-cchHHHHHHHHHHHHHhhhhcC
Q psy12593         59 DPRVKDWFLMSGPLPTVCICLSYAFIVKIVGPKLMED----RKPFQ-LRKTLIVYNFLQVLFSSWLFYE  122 (122)
Q Consensus        59 D~r~~~wpLm~sp~~~i~i~~~Yl~~V~~~Gp~~Mkn----RkPf~-Lr~~l~~yNl~~v~~S~~m~~e  122 (122)
                      .+|+++| |++||++++.++++|+++| ++||++|||    |||++ ||+++++||++|+++|++++++
T Consensus        14 ~~~~~~w-l~~~~~~~~~i~~~Yl~~V-~~Gp~~M~~~~~~Rkp~~~Lr~~l~~yNl~l~v~s~~~~~~   80 (272)
T PTZ00251         14 GHAVQKW-LASNVDICVYIAAAYLTFV-FKGPQLVDAIFHGNPPVPLIKKCWALWNIGLSVFSMYGVYR   80 (272)
T ss_pred             cHHHHHH-HHhCCHHHHHHHHHHHHHH-HHHHHHHhhccccCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5788999 7999999999999999999 499999975    99999 9999999999999999998753



>KOG3071|consensus Back     alignment and domain information
>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established Back     alignment and domain information
>KOG3072|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00